Psyllid ID: psy8884

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MSLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHPR
Secondary Structure (PSIPRED)
cccEEccccccHHHHHHHHHHccccccccEEEEEEccccEEEEEEEcccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccEEEEEEEEEcccccccHHHHHHHHHHHcccccccccEEEEEEccccEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccEccHHHHHHHHHHHHHHHHHccccHEEEcccccccEEEEEEccccccHHHHHHccccccHHHHHHHHHHHHHHccHHHEcccEEEcccEEEEEEEccccEEEcHHHHHHHHHHHHHHcccccHEEEcccccccEEEEEEccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mslydvgrqvfvptafyklkdlHHDHLVKFIGacldpphccllteycpkgslqdileneqfklepmfknslMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIgacldpphccllteycpkgslqdileneqfklepmfknslmNKAAFNrvlrihpr
Flexible Loop (DISEMBL)
MSLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAiknlkksridltrpLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEpmfknslmnkaafnrvlrihpr
Low Complexity Region (SEG)
MSLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIdltrplllelkrlkdlhhdhlvkFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHPR
Disordered region (IsUnstruct)
***YDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVL*****
Disordered Region (DISOPRED)
*SLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS*****ENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH**
Disordered Region (DISEMBL)
MSLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHPR
Disordered Region (DISPRO)
*SLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHPR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLYDVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
P55202	1050	Atrial natriuretic peptid	N/A	N/A	0.445	0.078	0.597	1e-25
P16067	1047	Atrial natriuretic peptid	yes	N/A	0.445	0.078	0.585	2e-25
Q6VVW5	1047	Atrial natriuretic peptid	yes	N/A	0.445	0.078	0.585	2e-25
P20594	1047	Atrial natriuretic peptid	yes	N/A	0.445	0.078	0.585	2e-25
P46197	1047	Atrial natriuretic peptid	yes	N/A	0.445	0.078	0.585	2e-25
P18910	1057	Atrial natriuretic peptid	no	N/A	0.304	0.052	0.573	4e-25
P18293	1057	Atrial natriuretic peptid	no	N/A	0.304	0.052	0.573	4e-25
P16066	1061	Atrial natriuretic peptid	no	N/A	0.304	0.052	0.573	4e-25
P11528	986	Resact receptor OS=Arbaci	N/A	N/A	0.434	0.081	0.525	2e-19
P16065	1125	Speract receptor OS=Stron	no	N/A	0.434	0.071	0.512	2e-18

>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2 PE=2 SV=1

 Score =  115 bits (289), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/82 (59%), Positives = 67/82 (81%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VAIK++ K RI+LTR +L ELK ++D+  +HL +FIGAC+DPP+ C++TEYCP+GS
Sbjct: 548 KGNLVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGS 607

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILENE   L+ MF+ SL+N
Sbjct: 608 LQDILENESINLDWMFRYSLIN 629

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.
Anguilla japonica (taxid: 7937)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2

>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2 PE=1 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 67/82 (81%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VAIK++ K RI+LTR +L ELK ++D+  +HL +FIGAC+DPP+ C++TEYCP+GS
Sbjct: 544 KGNVVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGS 603

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+   L+ MF+ SL+N
Sbjct: 604 LQDILENDSINLDWMFRYSLIN 625

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2 SV=2

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 67/82 (81%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VAIK++ K RI+LTR +L ELK ++D+  +HL +FIGAC+DPP+ C++TEYCP+GS
Sbjct: 544 KGNVVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGS 603

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+   L+ MF+ SL+N
Sbjct: 604 LQDILENDSINLDWMFRYSLIN 625

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 67/82 (81%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VAIK++ K RI+LTR +L ELK ++D+  +HL +FIGAC+DPP+ C++TEYCP+GS
Sbjct: 544 KGNVVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGS 603

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+   L+ MF+ SL+N
Sbjct: 604 LQDILENDSINLDWMFRYSLIN 625

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 67/82 (81%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VAIK++ K RI+LTR +L ELK ++D+  +HL +FIGAC+DPP+ C++TEYCP+GS
Sbjct: 544 KGNVVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGS 603

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+   L+ MF+ SL+N
Sbjct: 604 LQDILENDSINLDWMFRYSLIN 625

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1 PE=1 SV=1

 Score =  114 bits (285), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/82 (57%), Positives = 65/82 (79%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VA+K + + RI+LTR +L ELK ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GS
Sbjct: 556 KGNLVAVKRVNRKRIELTRKVLFELKHMRDVQNEHLTRFVGACTDPPNICILTEYCPRGS 615

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILENE   L+ MF+ SL N
Sbjct: 616 LQDILENESITLDWMFRYSLTN 637

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2 SV=2

 Score =  114 bits (285), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/82 (57%), Positives = 65/82 (79%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VA+K + + RI+LTR +L ELK ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GS
Sbjct: 556 KGNLVAVKRVNRKRIELTRKVLFELKHMRDVQNEHLTRFVGACTDPPNICILTEYCPRGS 615

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILENE   L+ MF+ SL N
Sbjct: 616 LQDILENESITLDWMFRYSLTN 637

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1

 Score =  114 bits (285), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/82 (57%), Positives = 65/82 (79%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +GN VA+K + + RI+LTR +L ELK ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GS
Sbjct: 560 KGNLVAVKRVNRKRIELTRKVLFELKHMRDVQNEHLTRFVGACTDPPNICILTEYCPRGS 619

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILENE   L+ MF+ SL N
Sbjct: 620 LQDILENESITLDWMFRYSLTN 641

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P11528|GCY_ARBPU Resact receptor OS=Arbacia punctulata PE=1 SV=1

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/80 (52%), Positives = 56/80 (70%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G   AI  + K+ IDLTR +  ELK ++D+ HD++  FIGAC+D PH C+L  YC KGSL
Sbjct: 591 GTICAIHAVHKNHIDLTRAVRTELKLMRDMRHDNICPFIGACIDRPHICILMHYCAKGSL 650

Query: 151 QDILENEQFKLEPMFKNSLM 170
           QDI+EN+  KL+ MF  SL+
Sbjct: 651 QDIMENDDIKLDSMFLASLI 670

Implicated as a cell-surface receptor on spermatozoa for 'resact' a chemotactic peptide, and on various other cells as a receptor for atrial natriuretic peptide.

Arbacia punctulata (taxid: 7641)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16065|GCY_STRPU Speract receptor OS=Strongylocentrotus purpuratus PE=2 SV=1

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 56/80 (70%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G   A+  + K+ IDLTR +  ELK ++D+ HD++  FIGAC+D PH  +L  YC KGSL
Sbjct: 594 GTVCALHAVHKNHIDLTRAVRTELKIMRDMRHDNICPFIGACIDRPHISILMHYCAKGSL 653

Query: 151 QDILENEQFKLEPMFKNSLM 170
           QDILEN+  KL+ MF +SL+
Sbjct: 654 QDILENDDIKLDSMFLSSLI 673

Implicated as a cell-surface receptor on spermatozoa for 'speract' a chemotactic peptide, and on various other cells as a receptor for atrial natriuretic peptide.

Strongylocentrotus purpuratus (taxid: 7668)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
328697703	284	PREDICTED: resact receptor-like [Acyrtho	0.570	0.369	0.657	4e-32
307170135	629	Atrial natriuretic peptide receptor A [C	0.548	0.160	0.611	3e-31
112983652	1126	receptor type guanylyl cyclase [Bombyx m	0.304	0.049	0.756	3e-31
357624113	1191	receptor type guanylyl cyclase [Danaus p	0.304	0.047	0.731	6e-31
345493253	1322	PREDICTED: atrial natriuretic peptide re	0.673	0.093	0.469	1e-29
350403823	1453	PREDICTED: atrial natriuretic peptide re	0.304	0.038	0.670	2e-29
340725323	1453	PREDICTED: atrial natriuretic peptide re	0.304	0.038	0.670	2e-29
383860979	1384	PREDICTED: atrial natriuretic peptide re	0.445	0.059	0.658	2e-29
328783669	1436	PREDICTED: atrial natriuretic peptide re	0.543	0.069	0.568	3e-28
332029271	867	Atrial natriuretic peptide receptor A [A	0.543	0.115	0.607	3e-28

>gi|328697703|ref|XP_003240412.1| PREDICTED: resact receptor-like [Acyrthosiphon pisum]

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 88/111 (79%), Gaps = 6/111 (5%)

Query: 62  KLEPMFKNSLMHDIVKFNGYLKTKELLKE--GNKVAIKNLKKSRIDLTRPLLLELKRLKD 119
           KLE  F  S+M+    F   ++T   +K   GNKVA+K LK+SR++LTRP LLELKRLKD
Sbjct: 3   KLEDRFTLSVMY----FGSIMETINSIKTPGGNKVALKTLKRSRLELTRPRLLELKRLKD 58

Query: 120 LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLM 170
           LHHDHLV+F GAC++P +CCLLTEYCPKGSLQDILENEQFKL+ MF+ SLM
Sbjct: 59  LHHDHLVRFYGACIEPNYCCLLTEYCPKGSLQDILENEQFKLDWMFRYSLM 109

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170135|gb|EFN62553.1| Atrial natriuretic peptide receptor A [Camponotus floridanus]

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/103 (61%), Positives = 84/103 (81%), Gaps = 2/103 (1%)

Query: 69  NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKF 128
           N+ M D V  N Y+ T     + +KVAIK++ +++++++RPLLLELKR+KDL HDHLV+F
Sbjct: 391 NASMPDGVDKNVYVPTG--FYKNSKVAIKHIPRNKVEISRPLLLELKRMKDLQHDHLVRF 448

Query: 129 IGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMN 171
            GACL+PPHCCLLTEYCPKGSLQDILENEQ KL+ +F+ SL++
Sbjct: 449 YGACLEPPHCCLLTEYCPKGSLQDILENEQIKLDRVFRGSLIH 491

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112983652|ref|NP_001036870.1| receptor type guanylyl cyclase [Bombyx mori] gi|12964646|dbj|BAB32672.1| receptor type guanylyl cyclase [Bombyx mori]

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/82 (75%), Positives = 71/82 (86%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +G +VAIK + K RIDLTRPLLLELK++KDL HDHL +F GAC+DPPHCCLLTEYCPKGS
Sbjct: 575 KGCRVAIKLVDKQRIDLTRPLLLELKKMKDLEHDHLARFYGACVDPPHCCLLTEYCPKGS 634

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILENE  KL+ MFK SLM+
Sbjct: 635 LQDILENESIKLDWMFKVSLMH 656

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357624113|gb|EHJ75005.1| receptor type guanylyl cyclase [Danaus plexippus]

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/82 (73%), Positives = 71/82 (86%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           +G +VA+K + K RIDLTRPLLLELK++KDL HDHL +F GAC+DPPHCCLLTEYCPKGS
Sbjct: 504 KGCRVAVKKVDKQRIDLTRPLLLELKKMKDLEHDHLARFYGACVDPPHCCLLTEYCPKGS 563

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+  KL+ MFK SLM+
Sbjct: 564 LQDILENDTIKLDWMFKVSLMH 585

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493253|ref|XP_001603765.2| PREDICTED: atrial natriuretic peptide receptor 2-like [Nasonia vitripennis]

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/132 (46%), Positives = 91/132 (68%), Gaps = 8/132 (6%)

Query: 44  TEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEG----NKVAIKNL 99
           +E    GSL  +  N+Q     ++      D +   G +  +  +  G    +K+AI+ +
Sbjct: 669 SEKFKAGSLYSLAPNKQRGQSSIYS----EDNMSLPGGMDRRSFVPTGIYKTSKIAIRPI 724

Query: 100 KKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF 159
            +++++++RPLLLELKR+KDL HDHLV+F GAC+DPPHCCLLTEYCP+GSLQDILENEQ 
Sbjct: 725 PRNKVEISRPLLLELKRMKDLQHDHLVRFYGACVDPPHCCLLTEYCPRGSLQDILENEQM 784

Query: 160 KLEPMFKNSLMN 171
           KL+ +F+ SL++
Sbjct: 785 KLDKVFRGSLIH 796

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403823|ref|XP_003486915.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Bombus impatiens]

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/82 (67%), Positives = 74/82 (90%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           + +KVAIK + +++++++RPLLLELKR+KDL HDHLV+F GAC+DPPHCCLLTEYCPKGS
Sbjct: 717 KNSKVAIKLIPRNKVEISRPLLLELKRMKDLQHDHLVRFYGACVDPPHCCLLTEYCPKGS 776

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+Q KL+ +F+ SL++
Sbjct: 777 LQDILENDQIKLDRVFRGSLIH 798

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725323|ref|XP_003401021.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Bombus terrestris]

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/82 (67%), Positives = 74/82 (90%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           + +KVAIK + +++++++RPLLLELKR+KDL HDHLV+F GAC+DPPHCCLLTEYCPKGS
Sbjct: 717 KNSKVAIKLIPRNKVEISRPLLLELKRMKDLQHDHLVRFYGACVDPPHCCLLTEYCPKGS 776

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+Q KL+ +F+ SL++
Sbjct: 777 LQDILENDQIKLDRVFRGSLIH 798

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860979|ref|XP_003705964.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Megachile rotundata]

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/82 (65%), Positives = 74/82 (90%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           + +KVAIK + +++++++RPLLLELKR+KDL HDHLV+F GAC++PPHCCLLTEYCP+GS
Sbjct: 713 KNSKVAIKPIPRNKVEISRPLLLELKRMKDLQHDHLVRFYGACVEPPHCCLLTEYCPRGS 772

Query: 150 LQDILENEQFKLEPMFKNSLMN 171
           LQDILEN+Q KL+ MF+ SL++
Sbjct: 773 LQDILENQQIKLDRMFRGSLIH 794

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783669|ref|XP_001121839.2| PREDICTED: atrial natriuretic peptide receptor 1-like [Apis mellifera]

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/102 (56%), Positives = 81/102 (79%), Gaps = 2/102 (1%)

Query: 70  SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFI 129
           S+  +I   N Y+ T   + + + VAIK + + +++++RPLLLELKR+KDL HDHLV+F 
Sbjct: 698 SMPGEIENRNVYIPTG--IYKNSTVAIKLIPRKKVEISRPLLLELKRMKDLQHDHLVRFY 755

Query: 130 GACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMN 171
           GAC++PP+CCLLTEYCPKGSLQDILENEQ KL+ +F+ SL++
Sbjct: 756 GACIEPPYCCLLTEYCPKGSLQDILENEQIKLDRVFRGSLIH 797

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029271|gb|EGI69254.1| Atrial natriuretic peptide receptor A [Acromyrmex echinatior]

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 2/102 (1%)

Query: 69  NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKF 128
           N+ + D V  N Y+ T     + +KVAIK + +++++++RPLLLELKR+KDL HDHLV+F
Sbjct: 649 NASLPDGVDRNVYVPTG--FYKNSKVAIKLIPRNKVEISRPLLLELKRMKDLQHDHLVRF 706

Query: 129 IGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLM 170
            GACL+PPHCCLLTEYCPKGSLQDILENEQ KL+ +F+ SL+
Sbjct: 707 YGACLEPPHCCLLTEYCPKGSLQDILENEQIKLDRVFRGSLI 748

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
FB|FBgn0051183	1417	CG31183 [Drosophila melanogast	0.407	0.052	0.64	1.2e-20
WB|WBGene00020131	1276	gcy-28 [Caenorhabditis elegans	0.402	0.057	0.554	9.9e-19
UNIPROTKB|F1SFW3	831	NPR1 "Guanylate cyclase" [Sus	0.402	0.089	0.527	3.2e-18
RGD|3195	1057	Npr1 "natriuretic peptide rece	0.402	0.070	0.527	5e-18
UNIPROTKB|P16066	1061	NPR1 "Atrial natriuretic pepti	0.402	0.069	0.527	5.1e-18
UNIPROTKB|E1BN71	1064	NPR1 "Guanylate cyclase" [Bos	0.402	0.069	0.527	6.5e-18
UNIPROTKB|F1PMP1	1060	NPR1 "Guanylate cyclase" [Cani	0.402	0.069	0.527	8.2e-18
MGI|MGI:97371	1057	Npr1 "natriuretic peptide rece	0.402	0.070	0.527	1e-17
UNIPROTKB|P55202	1050	npr2 "Atrial natriuretic pepti	0.402	0.070	0.527	3.9e-17
ZFIN|ZDB-GENE-100805-4	1070	npr1b "natriuretic peptide rec	0.402	0.069	0.513	4e-17

FB|FBgn0051183 CG31183 [Drosophila melanogaster (taxid:7227)]

 Score = 252 (93.8 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
 Identities = 48/75 (64%), Positives = 58/75 (77%)

Query:    18 KLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
             ++KDL HDHLVKF GACLD     LLTEYCPKGSLQDILENEQF+L+ MF+ SLMHDIV+
Sbjct:   646 RMKDLQHDHLVKFYGACLDQRRSFLLTEYCPKGSLQDILENEQFQLDWMFRLSLMHDIVR 705

Query:    78 FNGYLKTKELLKEGN 92
                +L + ++   GN
Sbjct:   706 GMQFLHSSDIRSHGN 720

GO:0004383 "guanylate cyclase activity" evidence=ISS;NAS

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IKR

GO:0006468 "protein phosphorylation" evidence=IKR

WB|WBGene00020131 gcy-28 [Caenorhabditis elegans (taxid:6239)]

 Score = 239 (89.2 bits), Expect = 9.9e-19, P = 9.9e-19
 Identities = 41/74 (55%), Positives = 56/74 (75%)

Query:    18 KLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
             K+KDL HDH+ +F GAC+D PH C++TEYCPKGSL+DILENE+ +L+ + K SL+HD+VK
Sbjct:   780 KMKDLQHDHITRFTGACIDFPHYCVVTEYCPKGSLEDILENEKIELDKLMKYSLLHDLVK 839

Query:    78 FNGYLKTKELLKEG 91
                +L   E+   G
Sbjct:   840 GLFFLHNSEIRSHG 853

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0042048 "olfactory behavior" evidence=IMP

GO:0006935 "chemotaxis" evidence=IMP

GO:0044297 "cell body" evidence=IDA

GO:0007606 "sensory perception of chemical stimulus" evidence=IMP

UNIPROTKB|F1SFW3 NPR1 "Guanylate cyclase" [Sus scrofa (taxid:9823)]

 Score = 220 (82.5 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   358 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENESITLDWMFRYSLTNDIVKG 417

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   418 MLFLHNGAICSHGN 431

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

RGD|3195 Npr1 "natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)" [Rattus norvegicus (taxid:10116)]

 Score = 220 (82.5 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   583 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENESITLDWMFRYSLTNDIVKG 642

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   643 MLFLHNGAICSHGN 656

GO:0004383 "guanylate cyclase activity" evidence=ISO;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006182 "cGMP biosynthetic process" evidence=ISO;IDA

GO:0007166 "cell surface receptor signaling pathway" evidence=IMP

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=ISO;IDA

GO:0017046 "peptide hormone binding" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IMP

GO:0030828 "positive regulation of cGMP biosynthetic process" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=IDA

GO:0042417 "dopamine metabolic process" evidence=IMP

GO:0042562 "hormone binding" evidence=ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IMP

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0008217 "regulation of blood pressure" evidence=ISO

UNIPROTKB|P16066 NPR1 "Atrial natriuretic peptide receptor 1" [Homo sapiens (taxid:9606)]

 Score = 220 (82.5 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   587 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENESITLDWMFRYSLTNDIVKG 646

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   647 MLFLHNGAICSHGN 660

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0017046 "peptide hormone binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0030828 "positive regulation of cGMP biosynthetic process" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042417 "dopamine metabolic process" evidence=IEA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA

GO:0008217 "regulation of blood pressure" evidence=NAS

GO:0030308 "negative regulation of cell growth" evidence=NAS

GO:0042312 "regulation of vasodilation" evidence=NAS

GO:0016525 "negative regulation of angiogenesis" evidence=TAS

GO:0035810 "positive regulation of urine volume" evidence=TAS

GO:0043114 "regulation of vascular permeability" evidence=TAS

GO:0007589 "body fluid secretion" evidence=TAS

GO:0035815 "positive regulation of renal sodium excretion" evidence=TAS

GO:0042562 "hormone binding" evidence=IPI

GO:0007166 "cell surface receptor signaling pathway" evidence=NAS

GO:0008528 "G-protein coupled peptide receptor activity" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0016941 "natriuretic peptide receptor activity" evidence=IDA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IDA

UNIPROTKB|E1BN71 NPR1 "Guanylate cyclase" [Bos taurus (taxid:9913)]

 Score = 220 (82.5 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   590 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENESITLDWMFRYSLTNDIVKG 649

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   650 MLFLHNGAICSHGN 663

GO:0042562 "hormone binding" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=IEA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1PMP1 NPR1 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 218 (81.8 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   586 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENEGITLDWMFRYSLTNDIVKG 645

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   646 MLFLHNGAICSHGN 659

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

MGI|MGI:97371 Npr1 "natriuretic peptide receptor 1" [Mus musculus (taxid:10090)]

 Score = 217 (81.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +F+GAC DPP+ C+LTEYCP+GSLQDILENE   L+ MF+ SL +DIVK 
Sbjct:   583 MRDVQNEHLTRFVGACTDPPNICILTEYCPRGSLQDILENESITLDWMFRYSLTNDIVKG 642

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   643 MLFLHNGAIGSHGN 656

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=ISO;IMP;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006182 "cGMP biosynthetic process" evidence=ISO;IMP;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007166 "cell surface receptor signaling pathway" evidence=ISO

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=ISO

GO:0008217 "regulation of blood pressure" evidence=IMP

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=ISO

GO:0017046 "peptide hormone binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030828 "positive regulation of cGMP biosynthetic process" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0042417 "dopamine metabolic process" evidence=ISO

GO:0042562 "hormone binding" evidence=ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=ISO

GO:0050880 "regulation of blood vessel size" evidence=IEA

UNIPROTKB|P55202 npr2 "Atrial natriuretic peptide receptor 2" [Anguilla japonica (taxid:7937)]

 Score = 223 (83.6 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 39/74 (52%), Positives = 55/74 (74%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+  +HL +FIGAC+DPP+ C++TEYCP+GSLQDILENE   L+ MF+ SL++DIVK 
Sbjct:   575 MRDVQFNHLTRFIGACIDPPNICIVTEYCPRGSLQDILENESINLDWMFRYSLINDIVKG 634

Query:    79 NGYLKTKELLKEGN 92
               +L    +   GN
Sbjct:   635 MNFLHNSYIGSHGN 648

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

ZFIN|ZDB-GENE-100805-4 npr1b "natriuretic peptide receptor 1b" [Danio rerio (taxid:7955)]

 Score = 223 (83.6 bits), Expect = 4.0e-17, P = 4.0e-17
 Identities = 38/74 (51%), Positives = 56/74 (75%)

Query:    19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
             ++D+ ++HL +FIGAC+DPP+ C++TEYCP+GSLQ+ILEN+   L+ MFK SL+ DIVK 
Sbjct:   597 MRDVQNEHLTRFIGACIDPPNICIVTEYCPRGSLQNILENDSITLDWMFKYSLISDIVKG 656

Query:    79 NGYLKTKELLKEGN 92
               +L    ++  GN
Sbjct:   657 MAFLHNSVIVSHGN 670

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46197	ANPRB_BOVIN	4, ., 6, ., 1, ., 2	0.5853	0.4456	0.0783	yes	N/A
Q6VVW5	ANPRB_MOUSE	4, ., 6, ., 1, ., 2	0.5853	0.4456	0.0783	yes	N/A
P16067	ANPRB_RAT	4, ., 6, ., 1, ., 2	0.5853	0.4456	0.0783	yes	N/A
P20594	ANPRB_HUMAN	4, ., 6, ., 1, ., 2	0.5853	0.4456	0.0783	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	184
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-12
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-09
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-08
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	9e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	9e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	6e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	7e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.001
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.001
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.001
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.001
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.002
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.002
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.002
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.002
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.003
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.003
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.003
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.003
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.003
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	0.003
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
              K G KVAIK +KK         LL E++ LK L+H ++VK  G   D  H  L+ EY
Sbjct: 13  RDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEY 72

Query: 145 CPKGSLQDILENEQFKLEPMFKNSLM 170
           C  GSL+D+L+  + KL       ++
Sbjct: 73  CEGGSLKDLLKENEGKLSEDEILRIL 98

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 66.0 bits (162), Expect = 2e-13
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKS-----RIDLTRPLLLELKRLKDLHHDHLVKFIGAC 132
           + G LK K+   +  +VA+K LK+      R D  +    E + +K L H ++V+ +G C
Sbjct: 12  YKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLK----EARVMKKLGHPNVVRLLGVC 65

Query: 133 LDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSL 169
            +     L+ EY   G L D L   +       K++L
Sbjct: 66  TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTL 102

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 93  KVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
           +VA+K LK+   +      L E + ++ L H ++VK +G C +     ++ EY   G L 
Sbjct: 30  EVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLL 89

Query: 152 DILEN 156
             L  
Sbjct: 90  SYLRK 94

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 93  KVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
           +VA+K LK+   +      L E + ++ L H ++VK +G C +     ++ EY P G L 
Sbjct: 30  EVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLL 89

Query: 152 DILEN 156
           D L  
Sbjct: 90  DYLRK 94

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 62.9 bits (154), Expect = 3e-12
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLK-KSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G LK      E  KVA+K LK  +  +     L E   +K L H ++V+ +G C    
Sbjct: 16  YKGTLKGDGEGTET-KVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGE 74

Query: 137 HCCLLTEYCPKGSLQDILENEQFKL 161
              ++TEY P G L D L     KL
Sbjct: 75  PLYIVTEYMPGGDLLDFLRKHGEKL 99

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 16  FYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDI 75
              LK L+H ++VK  G   D  H  L+ EYC  GSL+D+L+  + KL       ++  I
Sbjct: 42  IEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQI 101

Query: 76  VK 77
           ++
Sbjct: 102 LE 103

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.8 bits (151), Expect = 6e-12
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           K G  VAIK +KK +I   R  +L E+K LK L H ++V+      D     L+ EYC  
Sbjct: 22  KTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEG 81

Query: 148 GSLQDILENEQF 159
           G L D+L+    
Sbjct: 82  GDLFDLLKKRGR 93

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 88  LKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              G  VA+K LKK        +    E++ L+ L H ++V+ I A  D  H  L+ EYC
Sbjct: 21  KGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYC 80

Query: 146 PKGSLQDILENE 157
             G L D L   
Sbjct: 81  EGGDLFDYLSRG 92

Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 55.6 bits (135), Expect = 9e-10
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSL-MHDIVK 77
           +K L H ++V+ +G C +     L+ EY   G L D L   +       K++L + D++ 
Sbjct: 50  MKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Query: 78  F 78
           F
Sbjct: 110 F 110

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 90  EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
            G KVA+K LK          L E   +  L H +LV+ +G  L      ++TEY  KGS
Sbjct: 28  RGQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS 86

Query: 150 LQDIL 154
           L D L
Sbjct: 87  LVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 53.3 bits (129), Expect = 7e-09
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +K L H ++V+ +G C       ++TEY P G L D L     KL        + D+++ 
Sbjct: 55  MKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLT-------LKDLLQM 107

Length = 258

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKG 148
           G  VA+K L+ S  +  R    E++ LK L HD++VK+ G C      +  L+ EY P G
Sbjct: 33  GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 149 SLQDILENEQFKLE 162
           SL+D L+  + +L+
Sbjct: 93  SLRDYLQKHRERLD 106

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
          ++ L H ++VK +G C +     ++ EY   G L   L  
Sbjct: 55 MRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRK 94

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
          ++ L H ++VK +G C +     ++ EY P G L D L  
Sbjct: 55 MRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRK 94

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           + G +VAIK +K    +    ++ E++ LK   H ++VK+ G+ L      ++ E+C  G
Sbjct: 23  RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGG 82

Query: 149 SLQDILEN 156
           SL+D+L++
Sbjct: 83  SLKDLLKS 90

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 91  GNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCCLLTEYCP 146
           G  +A+K   L     +    L  E++ L  L H ++V++ G+  D       +  EY  
Sbjct: 25  GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84

Query: 147 KGSLQDILEN 156
            GSL  +L+ 
Sbjct: 85  GGSLSSLLKK 94

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           LK L H ++V+      D     L+ EYC  G L D+L+    +L        +  I+ 
Sbjct: 51  LKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRG-RLSEDEARFYLRQILS 108

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 11/80 (13%)

Query: 89  KEGNKVAIKNLKKS-----RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLL 141
             G +VA+K+L  S     R D  R    E++ L+ L H+++VK+ G C  P      L+
Sbjct: 31  NTGEQVAVKSLNHSGEEQHRSDFER----EIEILRTLDHENIVKYKGVCEKPGGRSLRLI 86

Query: 142 TEYCPKGSLQDILENEQFKL 161
            EY P GSL+D L+  + ++
Sbjct: 87  MEYLPSGSLRDYLQRHRDQI 106

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE 59
          L+ L H ++V+ I A  D  H  L+ EYC  G L D L   
Sbjct: 52 LRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG 92

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 9e-07
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 88  LKEGNKVAIKNLKKSRIDLT--RPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
           L+ G+ VAIK +   +I     + ++ E+  LK+L H ++VK+IG+        ++ EY 
Sbjct: 22  LETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81

Query: 146 PKGSLQDILEN 156
             GSL+ I++ 
Sbjct: 82  ENGSLRQIIKK 92

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 100 KKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF 159
           K+S +D    L  E+  LK+L H+++V+++G+ LD  H  +  EY P GS+  +L N   
Sbjct: 46  KRSMLD---ALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA 102

Query: 160 KLEPMFKN 167
             E + +N
Sbjct: 103 FEETLVRN 110

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           LK+L H+++V+++G+ LD  H  +  EY P GS+  +L N     E + +N  +  I+K 
Sbjct: 60  LKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRN-FVRQILKG 118

Query: 79  NGYLKTKELL 88
             YL  + ++
Sbjct: 119 LNYLHNRGII 128

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 93  KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           KVA+K LK   +      L E + +K L HD LV+    C +     ++TEY  KGSL D
Sbjct: 32  KVAVKTLKPGTMSPE-AFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90

Query: 153 ILENE 157
            L++ 
Sbjct: 91  FLKSG 95

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           K    VA+K LK+  +++    L E   +K++ H +LV+ +G C   P   ++TE+   G
Sbjct: 29  KYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 87

Query: 149 SLQDIL 154
           +L D L
Sbjct: 88  NLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 94  VAIKNLKK--SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
           VA+K LK+  S  +L R LL E   LK ++H H++K  GAC       L+ EY   GSL+
Sbjct: 33  VAVKMLKENASSSEL-RDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 91

Query: 152 DILENEQFKLEPMFKNSLMNK 172
             L  E  K+ P +  S  N+
Sbjct: 92  SFLR-ESRKVGPSYLGSDGNR 111

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 91  GNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           G +VAIK   L+K   +L   ++ E+  +KD  H ++V +  + L      ++ EY   G
Sbjct: 44  GKEVAIKKMRLRKQNKEL---IINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGG 100

Query: 149 SLQDILENEQFKL-EPM 164
           SL DI+     ++ EP 
Sbjct: 101 SLTDIITQNFVRMNEPQ 117

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 78  FNGYLKTKELLKEGN--KVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLD 134
           F   +K   L+K G   +VA+K LK+  I    +  L E   +  L H  +V+ IG C  
Sbjct: 8   FGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG 67

Query: 135 PPHCCLLTEYCPKGSLQDILENEQ 158
            P   L+ E  P G L   L+  +
Sbjct: 68  EP-LMLVMELAPLGPLLKYLKKRR 90

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 19  LKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQFKLE 64
           LK L HD++VK+ G C      +  L+ EY P GSL+D L+  + +L+
Sbjct: 59  LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLD 106

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 19 LKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILEN 58
          L  L H ++V++ G+  D       +  EY   GSL  +L+ 
Sbjct: 53 LSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK 94

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 89  KEGNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
            +G    +K  +L           L E+K LK L+H +++K+  +  +    C++ EY  
Sbjct: 23  SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYAD 82

Query: 147 KGSLQDILENEQFKLEPM 164
            G L   ++ ++ + +P 
Sbjct: 83  GGDLSQKIKKQKKEGKPF 100

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 105 DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL--LTEYCPKGSLQDILEN 156
           DL + +L EL+  K     ++VK+ GA LD     +    EYC  GSL  I + 
Sbjct: 41  DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKK 94

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 94  VAIKNLKK-SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           VA+K  K  +   +    L E   ++   H H+VK IG   + P   ++ E  P G L+ 
Sbjct: 37  VAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENP-VWIVMELAPLGELRS 95

Query: 153 ILENEQFKLE 162
            L+  ++ L+
Sbjct: 96  YLQVNKYSLD 105

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 19  LKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQFKL 63
           L+ L H+++VK+ G C  P      L+ EY P GSL+D L+  + ++
Sbjct: 60  LRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQI 106

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 94  VAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDI 153
           VA+K LK   +   +    E + L +L H+H+VKF G C D     ++ EY   G L   
Sbjct: 38  VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97

Query: 154 L 154
           L
Sbjct: 98  L 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 22 LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
          L H +LV+ +G  L      ++TEY  KGSL D L
Sbjct: 57 LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           L K   +VAIK LK   +   +    E++ LK L H HL+     C       ++TE   
Sbjct: 26  LWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85

Query: 147 KGSLQDILENEQFKLEPMFKNSLMNKAA 174
           KGSL   L + + ++ P+   SL++ A 
Sbjct: 86  KGSLLAFLRSPEGQVLPV--ASLIDMAC 111

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 94  VAIKNLKKSRIDLTR-PLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           VA+K L+    D  R   L E+K L  L   ++ + +G C   P  C++ EY   G L  
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108

Query: 153 ILENEQFK 160
            L+    +
Sbjct: 109 FLQKHVAE 116

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 87  LLKEGN--KVAIKNLKKS-RIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT 142
           L KE N  +VA+K LK S   D    L+ ELK L  L  H ++V  +GAC       ++T
Sbjct: 62  LGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT 121

Query: 143 EYCPKGSLQDILENEQ 158
           EYC  G L + L  + 
Sbjct: 122 EYCCYGDLLNFLRKKA 137

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 89  KEGNKVAIKNLK-KSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
             G   A+K +      +  + LL ELK L+     ++VK  GA        ++ EY   
Sbjct: 24  PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDG 83

Query: 148 GSLQDIL 154
           GSL D+L
Sbjct: 84  GSLADLL 90

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G L           VAIK LK++    + +    E + + DL H ++V  +G C    
Sbjct: 22  YKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81

Query: 137 HCCLLTEYCPKGSLQDIL 154
             C+L EY   G L + L
Sbjct: 82  PTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLK-KSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           KVA+K LK  +       L+ ELK +  L +H+++V  +GAC       ++TEYC  G L
Sbjct: 67  KVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDL 126

Query: 151 QDIL 154
            + L
Sbjct: 127 LNFL 130

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 89  KEGNK--VAIKNLKKSRIDLTRP-----LLLELKRLKDLHHDHLVKFIGACLDPPHCCLL 141
            E  K  VAIK L++     T P     +L E   +  + H H+V+ +G CL      L+
Sbjct: 32  GEKVKIPVAIKVLREE----TSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQV-QLI 86

Query: 142 TEYCPKGSLQDILENEQFKLEP 163
           T+  P G L D + N +  +  
Sbjct: 87  TQLMPLGCLLDYVRNHKDNIGS 108

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
          LK+L H ++VK+IG+        ++ EY   GSL+ I++ 
Sbjct: 53 LKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK 92

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 8   RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
           R+ F+  A Y ++   H H+VK IG   + P   ++ E  P G L+  L+  ++ L+
Sbjct: 51  REKFLQEA-YIMRQFDHPHIVKLIGVITENP-VWIVMELAPLGELRSYLQVNKYSLD 105

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 93  KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           KVA+K LK   + + +  L E   +K L HD LV+            ++TEY  KGSL D
Sbjct: 32  KVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD 90

Query: 153 ILENEQ 158
            L++++
Sbjct: 91  FLKSDE 96

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 113 ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 154
           E++ LK+L H+ +V++ G   D     +  EY P GS++D L
Sbjct: 54  EIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQL 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 94  VAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDI 153
           VA+K LK +  +  +    E + L +L H+H+VKF G C++     ++ EY   G L   
Sbjct: 38  VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97

Query: 154 L 154
           L
Sbjct: 98  L 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 38.7 bits (90), Expect = 7e-04
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 93  KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           ++AIK + +      +PL  E+     L H ++V+++G+  +     +  E  P GSL  
Sbjct: 35  RIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSA 94

Query: 153 ILENEQFKLEPMFKN 167
           +L +   K  P+  N
Sbjct: 95  LLRS---KWGPLKDN 106

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 13 PTAFYK----LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE 59
          P AF +    +K L HD LV+    C +     ++TEY  KGSL D L++ 
Sbjct: 45 PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSG 95

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 38.9 bits (90), Expect = 8e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 93  KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           KVA+K +K   + +    L E   +K L HD LVK        P   ++TE+  KGSL D
Sbjct: 32  KVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLD 89

Query: 153 ILENEQFKLEPMFK 166
            L++++   +P+ K
Sbjct: 90  FLKSDEGSKQPLPK 103

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 85  KELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE 143
           K +LK   +VA+K  + +   DL R  L E + LK   H ++VK IG C+      ++ E
Sbjct: 13  KGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVME 72

Query: 144 YCPKGSLQDILENEQFKL 161
             P GSL   L  ++ +L
Sbjct: 73  LVPGGSLLTFLRKKKNRL 90

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 91  GNKVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPK 147
           G  VA+K LK+      T     E+  LK L+H+++VK+ G C +       L+ EY P 
Sbjct: 33  GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPL 92

Query: 148 GSLQDILENEQFKL 161
           GSL+D L   +  L
Sbjct: 93  GSLRDYLPKHKLNL 106

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 94  VAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           VA+K LK  ++ D+    L E   +  L H++L++  G  L  P   ++TE  P GSL D
Sbjct: 26  VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHP-LMMVTELAPLGSLLD 84

Query: 153 ILENEQ 158
            L  + 
Sbjct: 85  RLRKDA 90

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 87  LLKEGNKVAIKN--LKKSRIDLT----RPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL 140
           L  +G  +A+K   L  S +         L  E+  LK L H ++V+++G CLD     +
Sbjct: 20  LTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79

Query: 141 LTEYCPKGSLQDILENEQFKLEPMF 165
             E+ P GS+  IL       EP+F
Sbjct: 80  FMEFVPGGSISSILNRFGPLPEPVF 104

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 81  YLKTKELLKEGNK---VAIKNLKKS-----RIDLTRPLLLELKRLKDLHHDHLVKFIGAC 132
           +L     L+  N    VA+K LK++     R D  R    E + L +  H+++VKF G C
Sbjct: 22  FLGECYHLEPENDKELVAVKTLKETASNDARKDFER----EAELLTNFQHENIVKFYGVC 77

Query: 133 LDPPHCCLLTEYCPKGSLQDIL 154
            +     ++ EY   G L   L
Sbjct: 78  TEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 93  KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD 152
           KVAIK+LK+  +      L E   +K L H  LV+        P   ++TEY   GSL D
Sbjct: 32  KVAIKSLKQGSMSPE-AFLAEANLMKQLQHPRLVRLYAVVTQEP-IYIITEYMENGSLVD 89

Query: 153 ILENEQFKLEPMFKNSLMNKAA 174
            L+  +     +  N L++ AA
Sbjct: 90  FLKTPEGIKLTI--NKLIDMAA 109

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKS-RIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           KVA+K LK + R    + L+ ELK +  L  H ++V  +GAC       ++TEYC  G L
Sbjct: 69  KVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDL 128

Query: 151 QDIL 154
            D L
Sbjct: 129 VDYL 132

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
          LK+L H+ +V++ G   D     +  EY P GS++D L
Sbjct: 58 LKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQL 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 91  GNKVAIKNLK-KSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPK 147
           G +VA+K+LK +S  +    L  E++ L++L+H+++VK+ G C +       L+ E+ P 
Sbjct: 33  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 92

Query: 148 GSLQDILENEQFKL 161
           GSL++ L   + K+
Sbjct: 93  GSLKEYLPRNKNKI 106

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 110 LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 154
           +L EL  L   +  ++V F GA  +     +  EY   GSL  IL
Sbjct: 46  ILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL 90

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 10/74 (13%)

Query: 87  LLKEGNK--VAIKNLKK----SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL 140
           LL E +K  VA+K LK+    +R D  R    E + L  L H H+V+F G C +     +
Sbjct: 29  LLPEQDKMLVAVKALKEASESARQDFQR----EAELLTVLQHQHIVRFYGVCTEGRPLLM 84

Query: 141 LTEYCPKGSLQDIL 154
           + EY   G L   L
Sbjct: 85  VFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 14/40 (35%), Positives = 25/40 (62%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
          LK   H ++VK+ G+ L      ++ E+C  GSL+D+L++
Sbjct: 51 LKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 5  DVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCL--LTEYCPKGSLQDILEN 58
          D+ +Q+         K     ++VK+ GA LD     +    EYC  GSL  I + 
Sbjct: 41 DLQKQILRELEI--NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKK 94

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 94  VAIKNL-----KKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           VA+K L     K +R D     L E+K L  L   ++++ +G C+D    C++TEY   G
Sbjct: 49  VAVKILRPDANKNARNDF----LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENG 104

Query: 149 SLQDILENEQF 159
            L   L +   
Sbjct: 105 DLNQFLSSHHL 115

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 106 LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 154
           + + +L EL+ + +    ++V F GA L+  + C+  E+   GSL  I 
Sbjct: 46  VRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIY 94

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 93  KVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKG 148
            VA+K L K            L E++ L  L H  ++VK      D     L+ EY   G
Sbjct: 24  LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGG 83

Query: 149 SLQDILENEQFKL 161
           SL+D+L+    K 
Sbjct: 84  SLEDLLKKIGRKG 96

Length = 384

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 91  GNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVK----FIGACLDPPHCCLLTE 143
             +V I+  KK       L      E+K L+ +  ++++K     I    D P   L+ E
Sbjct: 43  NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102

Query: 144 YCPKGSLQDILENEQ 158
           YC +G L+++L+ E+
Sbjct: 103 YCTRGYLREVLDKEK 117

Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 36.7 bits (86), Expect = 0.004
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 89  KEGNKVAIKNLKKSRID-----LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE 143
           K G  VA   LKK R+D     +    L E+  LK+L H ++VK +          L+ E
Sbjct: 22  KTGEIVA---LKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78

Query: 144 YCPKGSLQDILENEQFKLEPMFKNSLM 170
           YC    L+  L+     L P    S+M
Sbjct: 79  YCDM-DLKKYLDKRPGPLSPNLIKSIM 104

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
KOG0197|consensus	468		99.85
KOG0595|consensus	429		99.82
KOG1187|consensus	361		99.8
KOG4278|consensus	1157		99.76
KOG0192|consensus	362		99.75
KOG0575|consensus	592		99.71
KOG0194|consensus	474		99.71
KOG1094|consensus	807		99.69
KOG1026|consensus	774		99.67
KOG0581|consensus	364		99.65
KOG0615|consensus	475		99.65
KOG0196|consensus	996		99.63
KOG0611|consensus	668		99.62
KOG0600|consensus	560		99.62
KOG1095|consensus	1025		99.62
KOG0605|consensus	550		99.6
KOG0661|consensus	538		99.6
KOG0591|consensus	375		99.6
KOG0659|consensus	318		99.59
KOG0580|consensus	281		99.59
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.57
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.57
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.57
KOG0582|consensus	516		99.57
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.56
KOG4257|consensus	974		99.56
KOG0578|consensus	550		99.56
KOG0616|consensus	355		99.55
KOG0198|consensus	313		99.55
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.54
KOG0597|consensus	808		99.54
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.54
PHA02988	283	hypothetical protein; Provisional	99.53
KOG0583|consensus	370		99.53
KOG4717|consensus	864		99.52
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.52
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.52
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.52
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.52
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.52
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.52
KOG0610|consensus	459		99.51
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.51
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.51
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.51
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.51
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.51
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.5
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.5
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.5
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.5
KOG0593|consensus	396		99.5
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.49
KOG0032|consensus	382		99.49
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.49
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.49
KOG0598|consensus	357		99.49
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.49
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.49
KOG0588|consensus	786		99.49
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.49
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.49
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.49
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.48
KOG0199|consensus	1039		99.48
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.48
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.48
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.48
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.48
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.48
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.47
KOG0607|consensus	463		99.47
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.47
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.47
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.47
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.47
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.47
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.47
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.46
KOG4721|consensus	904		99.46
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.46
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.46
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.46
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.46
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.46
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.46
KOG1989|consensus	738		99.46
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.46
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.45
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.45
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.45
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.45
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.45
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.44
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.44
KOG4250|consensus	732		99.44
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.44
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.44
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.44
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.44
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.44
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.44
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.44
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.44
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.44
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.44
KOG0663|consensus	419		99.43
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.43
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.43
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.43
PTZ00267	478	NIMA-related protein kinase; Provisional	99.43
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.43
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.43
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.42
KOG0193|consensus	678		99.42
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.42
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.42
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.42
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.42
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.42
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.42
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.41
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.41
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.41
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.41
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.41
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.41
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.41
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.41
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.41
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.41
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.41
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.41
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.41
KOG0589|consensus	426		99.41
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.41
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.4
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.4
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.4
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.4
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.4
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.4
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.4
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.4
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.4
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.4
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.4
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.4
KOG0586|consensus	596		99.4
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.4
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.4
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.4
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.4
KOG2052|consensus	513		99.4
KOG3653|consensus	534		99.4
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.4
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.39
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.39
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.39
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.39
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.39
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.39
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.39
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.39
KOG0574|consensus	502		99.39
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.39
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.39
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.39
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.39
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.39
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.38
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.38
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.38
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.38
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.38
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.38
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.38
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.38
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.38
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.38
KOG1025|consensus	1177		99.38
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.38
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.38
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.38
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.38
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.38
KOG1187|consensus	361		99.38
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.38
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.38
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.38
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.38
KOG0592|consensus	604		99.38
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.38
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.37
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.37
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.37
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.37
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.37
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.37
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.37
KOG0594|consensus	323		99.37
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.37
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.37
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.36
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.36
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.36
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.36
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.36
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.36
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.36
KOG0584|consensus	632		99.36
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.36
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.36
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.35
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.35
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.35
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.35
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.35
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.35
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.34
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.34
KOG0585|consensus	576		99.34
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.34
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.34
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.34
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.34
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.34
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.33
KOG2345|consensus	302		99.33
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.33
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.33
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.33
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.33
KOG4279|consensus	1226		99.33
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.33
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.33
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.32
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.32
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.32
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.32
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.32
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.32
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.32
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.32
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.32
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.32
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.32
KOG0694|consensus	694		99.32
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.31
PHA03212	391	serine/threonine kinase US3; Provisional	99.31
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.31
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.31
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.31
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.31
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.31
KOG0577|consensus	948		99.31
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.3
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.3
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.3
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.3
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.3
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.3
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.3
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.3
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.3
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.3
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.3
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.29
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.29
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.29
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.29
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.29
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.29
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.29
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.29
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.29
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.29
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.28
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.28
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.28
KOG4236|consensus	888		99.28
PLN00009	294	cyclin-dependent kinase A; Provisional	99.28
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.28
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.28
KOG0201|consensus	467		99.28
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.28
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.27
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.27
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.27
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.27
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.27
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.27
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.27
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.26
KOG0662|consensus	292		99.26
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.26
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.26
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.26
KOG0579|consensus	1187		99.26
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.26
KOG0200|consensus	609		99.26
KOG0612|consensus	1317		99.26
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.25
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.25
PHA03211	461	serine/threonine kinase US3; Provisional	99.25
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.25
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.24
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.24
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.24
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.24
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.24
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.23
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.23
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.23
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.23
PTZ00283	496	serine/threonine protein kinase; Provisional	99.23
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.23
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.23
KOG0587|consensus	953		99.23
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.23
PHA03209	357	serine/threonine kinase US3; Provisional	99.23
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.22
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.22
KOG0033|consensus	355		99.22
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.22
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.22
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.21
KOG0195|consensus	448		99.21
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.2
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.2
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.2
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.2
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.2
KOG0608|consensus	1034		99.2
PHA03207	392	serine/threonine kinase US3; Provisional	99.19
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.19
KOG0576|consensus	829		99.19
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.19
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.18
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.18
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.17
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.17
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.17
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.17
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.16
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.16
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.16
PTZ00036	440	glycogen synthase kinase; Provisional	99.16
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.15
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.14
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.14
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.14
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.14
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.12
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.12
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.11
KOG0660|consensus	359		99.11
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.1
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.09
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.09
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.08
KOG0690|consensus	516		99.08
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.08
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.08
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.07
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.06
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.06
KOG0667|consensus	586		99.05
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.04
KOG0599|consensus	411		99.04
KOG0666|consensus	438		99.03
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.01
KOG1151|consensus	775		98.99
KOG1152|consensus	772		98.96
KOG0658|consensus	364		98.96
KOG0192|consensus	362		98.96
KOG0604|consensus	400		98.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.94
PTZ00284	467	protein kinase; Provisional	98.93
KOG4645|consensus	1509		98.93
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.92
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.86
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.85
PRK09188	365	serine/threonine protein kinase; Provisional	98.85
KOG0595|consensus	429		98.84
KOG0197|consensus	468		98.8
KOG1035|consensus	1351		98.78
PRK10345	210	hypothetical protein; Provisional	98.76
KOG0986|consensus	591		98.76
KOG0696|consensus	683		98.71
KOG1027|consensus	903		98.7
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.69
KOG4721|consensus	904		98.68
KOG0669|consensus	376		98.68
PHA03210	501	serine/threonine kinase US3; Provisional	98.67
PRK14879	211	serine/threonine protein kinase; Provisional	98.65
KOG0614|consensus	732		98.6
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.57
KOG0695|consensus	593		98.52
KOG1026|consensus	774		98.52
KOG0194|consensus	474		98.47
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.43
KOG1290|consensus	590		98.4
KOG0611|consensus	668		98.4
KOG0668|consensus	338		98.39
KOG1345|consensus	378		98.38
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.38
KOG1006|consensus	361		98.35
KOG1094|consensus	807		98.29
KOG1095|consensus	1025		98.28
KOG0193|consensus	678		98.27
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.23
KOG0615|consensus	475		98.23
smart00090	237	RIO RIO-like kinase.	98.2
KOG4250|consensus	732		98.19
KOG0581|consensus	364		98.17
KOG4278|consensus	1157		98.16
KOG0671|consensus	415		98.16
KOG0984|consensus	282		98.16
KOG0596|consensus	677		98.11
KOG0575|consensus	592		98.09
KOG0196|consensus	996		98.09
KOG1023|consensus	484		98.08
KOG0198|consensus	313		98.08
PHA02882	294	putative serine/threonine kinase; Provisional	98.07
KOG1024|consensus	563		98.06
KOG0983|consensus	391		98.02
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.01
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.01
KOG0603|consensus	612		98.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	97.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	97.97
KOG0664|consensus	449		97.92
KOG0589|consensus	426		97.9
KOG1023|consensus	484		97.87
KOG1167|consensus	418		97.85
KOG0580|consensus	281		97.84
KOG0670|consensus	752		97.83
PTZ00267	478	NIMA-related protein kinase; Provisional	97.82
KOG1166|consensus	974		97.78
KOG0578|consensus	550		97.77
KOG0583|consensus	370		97.76
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	97.75
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	97.7
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	97.69
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	97.68
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.67
KOG0586|consensus	596		97.67
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	97.66
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.64
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.64
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	97.59
PHA02988	283	hypothetical protein; Provisional	97.59
KOG1164|consensus	322		97.59
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	97.59
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	97.57
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	97.56
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	97.56
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	97.53
KOG0600|consensus	560		97.52
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.51
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	97.51
KOG0597|consensus	808		97.51
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	97.51
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	97.51
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	97.5
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	97.49
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	97.49
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	97.48
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	97.47
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	97.47
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	97.46
PTZ00263	329	protein kinase A catalytic subunit; Provisional	97.46
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	97.44
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.44
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	97.43
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	97.43
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	97.42
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	97.42
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.42
KOG1165|consensus	449		97.41
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.41
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	97.4
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	97.4
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	97.39
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	97.39
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	97.37
KOG4257|consensus	974		97.37
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	97.37
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.36
KOG0585|consensus	576		97.35
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.34
KOG1989|consensus	738		97.34
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	97.34
KOG0032|consensus	382		97.34
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	97.32
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	97.32
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	97.31
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	97.31
KOG0574|consensus	502		97.3

>KOG0197|consensus

Probab=99.85  E-value=4.1e-21  Score=146.95  Aligned_cols=168  Identities=24%  Similarity=0.230  Sum_probs=129.2

Q ss_pred             ccccCcc--cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhh-hhhcc--cCccccccchhhhhhcc
Q psy8884           3 LYDVGRQ--VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDI-LENEQ--FKLEPMFKNSLMHDIVK   77 (184)
Q Consensus         3 ~~~~~~~--~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~-l~~~~--~~~~~~~~~~~~~~~~~   77 (184)
                      .++++..  +-.+..|..+.++..++-.+..|.|..-...+.....   ..+... +....  .....+.+..-++.|.+
T Consensus       143 ~~~~~~~~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~~~~~---~~p~~~~~~~d~wei~r~~l~l~~~LG~G~F  219 (468)
T KOG0197|consen  143 LDGGGLYPYIDERELFSSLQQLVNYYSKNADGLCTRLRDPCSKQGH---TKPQTPDLARDPWEIPREELKLIRELGSGQF  219 (468)
T ss_pred             cCCCCeecCCCHHHhhhhHHHHHhhhhccCcchhhcccCchhccCC---CCCCCCccccCCeeecHHHHHHHHHhcCCcc
Confidence            3556556  7788899999999999988888887554333332110   111111 10122  23444566667888888


Q ss_pred             cceeeecceeeecCc-EEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhh
Q psy8884          78 FNGYLKTKELLKEGN-KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus        78 ~~~~~~~~~~~~~g~-~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~  156 (184)
                      |.|+.+    .|.|. +||+|.++..... .++|.+|+.+|++++|+|||+++|.|..+.++|||||||+.|+|.++|+.
T Consensus       220 G~V~~g----~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~  294 (468)
T KOG0197|consen  220 GEVWLG----KWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT  294 (468)
T ss_pred             ceEEEE----EEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh
Confidence            888774    57777 9999999986543 57799999999999999999999999998899999999999999999997


Q ss_pred             -cCCCCCHHHHHHHHHHHHHHhh
Q psy8884         157 -EQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       157 -~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                       .+..+...+.+.++.|||+||+
T Consensus       295 ~~~~~l~~~~Ll~~a~qIaeGM~  317 (468)
T KOG0197|consen  295 REGGLLNLPQLLDFAAQIAEGMA  317 (468)
T ss_pred             cCCCccchHHHHHHHHHHHHHHH
Confidence             5567889999999999999998

>KOG0595|consensus

Probab=99.82  E-value=1.3e-19  Score=134.93  Aligned_cols=116  Identities=25%  Similarity=0.298  Sum_probs=100.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ....|.+..-++.|.++.||.+.  ...++..||||.+...+  ....+.+..|++++++++|||||.++.++.+++.+|
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~--h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGR--HKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             ccccceehhhccCcceEEEEEeE--eccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            34556666668888888899877  66778999999998774  344666889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +|||||.||+|.+++++.+ .+++.....++.|+|.||..+
T Consensus        86 lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L  125 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFL  125 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865 689999999999999999844

>KOG1187|consensus

Probab=99.80  E-value=4.1e-19  Score=135.41  Aligned_cols=115  Identities=29%  Similarity=0.325  Sum_probs=96.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-cEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-~~~lv~e  143 (184)
                      .|.-..+++.|++|.+|.+.   ...|..||||.+.........+|.+|+.++..++|||+++++|+|.+.+ ..++|+|
T Consensus        76 ~Fs~~~~ig~Ggfg~VYkG~---l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYE  152 (361)
T KOG1187|consen   76 NFSESNLIGEGGFGTVYKGV---LSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYE  152 (361)
T ss_pred             CCchhcceecCCCeEEEEEE---ECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEE
Confidence            34455678888888888764   4556899999887754321345999999999999999999999999988 4999999


Q ss_pred             ecCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQF-KLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~-~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||++|+|.+.|..... .++|..|++|+.++|+||+.+|.
T Consensus       153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~  192 (361)
T KOG1187|consen  153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHE  192 (361)
T ss_pred             ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHcc
Confidence            9999999999987655 88999999999999999997765

>KOG4278|consensus

Probab=99.76  E-value=3.5e-18  Score=134.02  Aligned_cols=165  Identities=21%  Similarity=0.250  Sum_probs=124.1

Q ss_pred             ccCcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecC---CCchhhhhhh-cccC--ccccccchhhhhhccc
Q psy8884           5 DVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCP---KGSLQDILEN-EQFK--LEPMFKNSLMHDIVKF   78 (184)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~---~~~l~~~l~~-~~~~--~~~~~~~~~~~~~~~~   78 (184)
                      ++..++-....|.+|..|+|++.+-..|+...     +.+ ..+   ++.+...-.+ ..|+  .....+...++.|.+|
T Consensus       208 dgK~yvt~EsrF~TLaELVHHHStvADGLitt-----LhY-PApK~nKptvygvSPn~DkWEmeRtdItMkhKLGGGQYG  281 (1157)
T KOG4278|consen  208 DGKMYVTQESRFRTLAELVHHHSTVADGLITT-----LHY-PAPKKNKPTVYGVSPNADKWEMERTDITMKHKLGGGQYG  281 (1157)
T ss_pred             CccEEEeehhhhhHHHHHHhhccccccceeEe-----eec-cCccCCCCceeeecCCcchhhccchheeeeeccCCCccc
Confidence            34456666678999999999998888887422     222 122   2222111111 2232  3334555667888888


Q ss_pred             ceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhc-
Q psy8884          79 NGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-  157 (184)
Q Consensus        79 ~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~-  157 (184)
                      .||.++|+  .....||||.++...++ .++|+.|..+|+.++|||+|+++|.|....++||++|||.+|+|.+||+.. 
T Consensus       282 eVYeGvWK--kyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  282 EVYEGVWK--KYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             ceeeeeee--ccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhc
Confidence            88887754  34568999999988766 678999999999999999999999999999999999999999999999975 


Q ss_pred             CCCCCHHHHHHHHHHHHHHhh
Q psy8884         158 QFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       158 ~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +..++...++.++.||+.||.
T Consensus       359 r~ev~avvLlyMAtQIsSaMe  379 (1157)
T KOG4278|consen  359 RSEVPAVVLLYMATQISSAME  379 (1157)
T ss_pred             hhhcchhHHHHHHHHHHHHHH
Confidence            345677788999999999997

>KOG0192|consensus

Probab=99.75  E-value=1.2e-17  Score=126.94  Aligned_cols=115  Identities=25%  Similarity=0.335  Sum_probs=97.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcE-EEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCC-cEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNK-VAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-~~~  139 (184)
                      +.+...+.++.|++|.+|.    +.|+|.. ||+|.+......  ....|.+|+.+|.+++||||++++|.|.++. ..+
T Consensus        41 ~~l~~~~~iG~G~~g~V~~----~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~  116 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYK----GKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLC  116 (362)
T ss_pred             HHhhhhhhcccCCceeEEE----EEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceE
Confidence            3344555688888888886    4688888 999999875432  2558999999999999999999999999887 799


Q ss_pred             EEEeecCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILEN-EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~-~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||||+++|+|.+++.+ ....+++..++.++.|||+||..+++
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~  160 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS  160 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999987 35689999999999999999987764

>KOG0575|consensus

Probab=99.71  E-value=7e-17  Score=125.72  Aligned_cols=116  Identities=18%  Similarity=0.211  Sum_probs=102.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..|....++++||+..+|...  +..+|+.||+|++.....   ...+.+.+|+++.++++|||||+++++|++.+.+|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~--~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEAR--DLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEE--EcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            568888999999999999987  778999999999987543   346778999999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.|+|++|+|.++++.. ..+++.+...+++||+.||--+++
T Consensus        96 vLELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH~  136 (592)
T KOG0575|consen   96 VLELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLHS  136 (592)
T ss_pred             EEEecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999854 478899999999999999975543

>KOG0194|consensus

Probab=99.71  E-value=9.4e-17  Score=124.51  Aligned_cols=118  Identities=20%  Similarity=0.205  Sum_probs=98.3

Q ss_pred             cccccchhhhhhcccceeeecceeeec--CcEEEEeEeeccc---hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKE--GNKVAIKNLKKSR---IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +...+...+++|++|.|+.+.......  ...||+|..+.+.   .....++.+|.++|++++||||++++|.+...+++
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            334566789999999999986321111  1238999998633   35577899999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |++||+|+||+|.++|++....++..++..++.++|.||+-++
T Consensus       237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh  279 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH  279 (474)
T ss_pred             EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH
Confidence            9999999999999999987767999999999999999999543

>KOG1094|consensus

Probab=99.69  E-value=3.8e-17  Score=127.05  Aligned_cols=116  Identities=22%  Similarity=0.309  Sum_probs=98.5

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ++..+.+.+.+.+++|.+|.+.++.   +..+.+||||.+++... ....+|..|+++|.+++||||+++.|.|...+++
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCe---veg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi  610 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCE---VEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL  610 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEE---ecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence            3445556777889999999988875   44468999999998654 4568899999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHhh
Q psy8884         139 CLLTEYCPKGSLQDILENEQFK-LEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~-l~~~~~~~i~~qi~~gl~  178 (184)
                      ++++|||++|+|..+|..+..+ ........+|.|||.||+
T Consensus       611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgma  651 (807)
T KOG1094|consen  611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMA  651 (807)
T ss_pred             HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHH
Confidence            9999999999999999876433 355667889999999998

>KOG1026|consensus

Probab=99.67  E-value=1.2e-16  Score=128.51  Aligned_cols=116  Identities=19%  Similarity=0.250  Sum_probs=96.5

Q ss_pred             ccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .....+.+-++++++|.||++...+.   ..-..||||.++..... ..++|.+|++++..++|||||+++|.|..+++.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            34445567789999999998762221   22358999999987654 678999999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhc---------C----CCCCHHHHHHHHHHHHHHhh
Q psy8884         139 CLLTEYCPKGSLQDILENE---------Q----FKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~---------~----~~l~~~~~~~i~~qi~~gl~  178 (184)
                      ++|+|||..|+|.++|+..         +    ..++..+.+.|+.|||.||+
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~  617 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGME  617 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999732         1    23788899999999999998

>KOG0581|consensus

Probab=99.65  E-value=1.1e-15  Score=113.09  Aligned_cols=116  Identities=19%  Similarity=0.174  Sum_probs=99.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeecc-chhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-cEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-~~~l  140 (184)
                      ...+.....++.|.+|.|++..  +..+++.+|+|++... +....++..+|+.+++..+||+||.++|+|..+. .+++
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~--Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI  155 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVR--HKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI  155 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEE--EcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence            3455666779999999999987  7788999999999543 2344677899999999999999999999999888 4999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||++|||.+.++.-+ .+++..+-.++.+|++||.-++
T Consensus       156 ~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh  195 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLH  195 (364)
T ss_pred             ehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998653 6899999999999999998443

>KOG0615|consensus

Probab=99.65  E-value=8e-16  Score=115.25  Aligned_cols=113  Identities=21%  Similarity=0.167  Sum_probs=95.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-------hhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-------LTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .+.+.+.+.++.|++|.|-++.  ...+|+.||+|.+......       ......+|+.+|++++|||||++++++..+
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~--e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAY--EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEE--EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            4456667788899998888876  6778999999999865432       122357999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +..|+||||+.||+|.+.+-.++ .+.+.....++.|++.|+-
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avk  290 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVK  290 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHH
Confidence            99999999999999999998765 5778888889999999986

>KOG0196|consensus

Probab=99.63  E-value=4.4e-16  Score=124.57  Aligned_cols=120  Identities=18%  Similarity=0.165  Sum_probs=102.7

Q ss_pred             cccCccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ++.+.....+.+.+++|.+|.|+.+..+- -.+-..||+|.+|.... ....+|+.|..+|.+.+||||++|.|......
T Consensus       624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK  703 (996)
T ss_pred             hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence            34456677888999999999999875221 12335899999997644 44678999999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +++|+.|||++|+|+.+|+.+...+.+.++..+.++||.||.
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMk  745 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMK  745 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhH
Confidence            999999999999999999988778999999999999999996

>KOG0611|consensus

Probab=99.62  E-value=1.1e-15  Score=114.87  Aligned_cols=113  Identities=17%  Similarity=0.195  Sum_probs=99.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhH---HHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTR---PLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~---~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ...|.+.+.++.|.+|.|-++.  ....|+.||+|.++...+...+   ...+|+++|+.++||||+.++..|...+.+.
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~--e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAY--EHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehh--hccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            3457888889999999888876  5578999999999988775444   3679999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +||||..+|.|++|+...+ .+++....++.+||..|+.
T Consensus       130 ivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVh  167 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVH  167 (668)
T ss_pred             EEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHH
Confidence            9999999999999998765 6899999999999999986

>KOG0600|consensus

Probab=99.62  E-value=2.3e-15  Score=115.24  Aligned_cols=115  Identities=17%  Similarity=0.175  Sum_probs=101.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC--Cc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~  137 (184)
                      ..+.|...+.+++|.+|.||++.  ...+|+.||+|.++..+.  .......+|+.+|++++||||+++.+...+.  ..
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr--~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s  192 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKAR--DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS  192 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEee--ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence            34567777899999999999988  888999999999987764  3345567999999999999999999987765  68


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhh
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      +|+|+|||+. +|..++...+..+++.++..++.|++.||.-
T Consensus       193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~  233 (560)
T KOG0600|consen  193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEY  233 (560)
T ss_pred             EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHH
Confidence            9999999998 8999999888889999999999999999983

>KOG1095|consensus

Probab=99.62  E-value=2.4e-15  Score=124.93  Aligned_cols=118  Identities=20%  Similarity=0.156  Sum_probs=100.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeec---CcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKE---GNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      +.....++...++.|++|.||.+.+.+...   ...||+|.++... .....+|++|..+|+.++||||++++|.|.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            345556777889999999999876443222   3469999998754 355778999999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHhh
Q psy8884         137 HCCLLTEYCPKGSLQDILENE------QFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~------~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      ..++++|||++|+|..+|++.      ...+....++.++.|||+||.
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~  816 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMN  816 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhH
Confidence            999999999999999999986      567889999999999999997

>KOG0605|consensus

Probab=99.60  E-value=5.2e-15  Score=113.98  Aligned_cols=119  Identities=18%  Similarity=0.173  Sum_probs=104.1

Q ss_pred             hcccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeec
Q psy8884          58 NEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLD  134 (184)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~  134 (184)
                      +....++.|.....++.|++|+|+++.  -..+|..+|+|.++++..   .....+..|-.+|...++++||+++.+|.+
T Consensus       135 R~r~~~~DFe~Lk~IgkGAfGeVrLar--Kk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD  212 (550)
T KOG0605|consen  135 RTRLSLDDFELLKVIGKGAFGEVRLAR--KKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD  212 (550)
T ss_pred             cccCCcccchhheeeccccceeEEEEE--EccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC
Confidence            445577888888999999999999987  667899999999998766   335668899999999999999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhh
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      .+.+||||||++||++..+|.+.+ .+++.....++.+.+.|+..
T Consensus       213 ~~~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~  256 (550)
T KOG0605|consen  213 KEYLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIES  256 (550)
T ss_pred             CCeeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHH
Confidence            999999999999999999998766 68888888888888888774

>KOG0661|consensus

Probab=99.60  E-value=8.4e-16  Score=116.92  Aligned_cols=112  Identities=19%  Similarity=0.150  Sum_probs=97.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCC-CcchhhhheeeecCC-cEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLH-HDHLVKFIGACLDPP-HCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~-~~~l  140 (184)
                      +.|...+-+|.|.+|+|+++.  ....|..||+|.++..-.. ..-.-++|+..++++. ||||+++.+.+.+.+ .+|+
T Consensus        10 ~RY~~i~klGDGTfGsV~la~--~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAK--SKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEee--ecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            456666789999999999988  7778999999999875432 2233579999999998 999999999999887 9999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      |||||+. +|+++++..+..+++..+.+|+.||++||+
T Consensus        88 VfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~  124 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLA  124 (538)
T ss_pred             eHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHH
Confidence            9999997 899999988888999999999999999998

>KOG0591|consensus

Probab=99.60  E-value=6.3e-16  Score=110.96  Aligned_cols=121  Identities=16%  Similarity=0.191  Sum_probs=102.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhhe-eeecCCc-
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIG-ACLDPPH-  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~-~~~~~~~-  137 (184)
                      .+..|.+.+.++.|.+|.+|+..  +..+|..+|.|.++-..+  ...+....|+.++++++||||+++++ .+.+.+. 
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~--~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev   94 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQ--CLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV   94 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEee--eccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence            55567777889999999999988  889999999999985544  34667889999999999999999998 5555555 


Q ss_pred             EEEEEeecCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHhhhccC--CC
Q psy8884         138 CCLLTEYCPKGSLQDILE---NEQFKLEPMFKNSLMNKAAFNRVLRIH--PR  184 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~---~~~~~l~~~~~~~i~~qi~~gl~~~~~--~~  184 (184)
                      ++++||+|..|+|...++   +.+..+++....++..|+|.||..-++  ||
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r  146 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPR  146 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccc
Confidence            899999999999999986   345678999999999999999997777  65

>KOG0659|consensus

Probab=99.59  E-value=1.1e-14  Score=103.80  Aligned_cols=113  Identities=21%  Similarity=0.258  Sum_probs=100.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .|...+.+++|.++.||++.  +..+|+.||+|.++..+..  ......+|+..++.++|+||+.+..+|...+.+.+|.
T Consensus         3 rY~~~~~lGEG~~gvVyka~--d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKAR--DTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEE--ecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            35556789999999999987  8889999999999976542  2445789999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ||++. +|+..+++....+...+...++.++++|++-.
T Consensus        81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~  117 (318)
T KOG0659|consen   81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYC  117 (318)
T ss_pred             Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHH
Confidence            99998 89999999888899999999999999999943

>KOG0580|consensus

Probab=99.59  E-value=3.2e-15  Score=104.90  Aligned_cols=123  Identities=21%  Similarity=0.215  Sum_probs=105.6

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ..+.++.|++...++.|.+|.+|++.  ...++-.||+|++-.+.+   .....+.+|+++-+.++||||.++++.+.+.
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlar--ekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~   94 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAR--EKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS   94 (281)
T ss_pred             cccchhhccccccccCCccccEeEee--eccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence            46788999999999999999999987  556677999999977655   2355688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccCC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIHP  183 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~~  183 (184)
                      ..+|+++||.+.|+++..|... ...+++.....++.|+|.|+.--+.|
T Consensus        95 ~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k  143 (281)
T KOG0580|consen   95 KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK  143 (281)
T ss_pred             ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC
Confidence            9999999999999999999843 23578888889999999999855544

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.57  E-value=2.9e-14  Score=104.89  Aligned_cols=119  Identities=17%  Similarity=0.107  Sum_probs=98.0

Q ss_pred             ccccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ...+.+.+.++.|++|.+|.+.+. ....+..||+|.++.... .....+.+|+..+..++|||++++++.+..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            345677788999999999886421 113466899999986532 334568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++......+++.+...++.|++.||+..+
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH  124 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS  124 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876557889999999999999999654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.57  E-value=2.4e-14  Score=108.60  Aligned_cols=121  Identities=17%  Similarity=0.126  Sum_probs=101.7

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ..+.++.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++....   ...+.+.+|+.++..++||||+++++.+...
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   90 (329)
T PTZ00263         13 SSWKLSDFEMGETLGTGSFGRVRIAK--HKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE   90 (329)
T ss_pred             CCCCchheEEEEEEEecCCeEEEEEE--ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC
Confidence            34566778888899999999999876  455788999999986532   2345688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+++|||+++|+|.+++.+.+ .+++.....++.||+.||+..++
T Consensus        91 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~  136 (329)
T PTZ00263         91 NRVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHS  136 (329)
T ss_pred             CEEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 57888888999999999986543

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.57  E-value=7.4e-15  Score=107.72  Aligned_cols=114  Identities=25%  Similarity=0.288  Sum_probs=92.3

Q ss_pred             cchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          68 KNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ..+.++.|.+|.++.+.+.  ....+..|++|.++.... .....+.+|+..++.++||||++++|.+...+..++++||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3466888999998887643  223467999999976433 3467899999999999999999999999988889999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|+|.++|... ...+++.++..++.||++||+.++
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh  120 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH  120 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccc
Confidence            9999999999886 557899999999999999999543

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0582|consensus

Probab=99.57  E-value=1.8e-14  Score=109.04  Aligned_cols=119  Identities=14%  Similarity=0.123  Sum_probs=103.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh-hHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL-TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~-~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.|.+.+.++.|....|+.+.  ...++..||||.+..++... ...+.+|+..|+.++||||++.+.+|.....+|+
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~--c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLAR--CIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CccceeEEEEEeccceeEeeeee--ecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence            45667788888888888888877  78889999999998765532 5778999999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||.||.+||+.++++.. ...+++..+..|.+++++||.-+++
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~  144 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ  144 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999864 3468999999999999999985543

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.9e-14  Score=110.45  Aligned_cols=114  Identities=16%  Similarity=0.114  Sum_probs=96.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|...+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.++..++|+||+++++.+.+++..+++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQ--KKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             CceEEEEEEecCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence            35566788999999999876  566789999999986532   2244577899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++...+ .+++.....++.|++.||+..+
T Consensus        80 ~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH  118 (364)
T cd05599          80 MEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH  118 (364)
T ss_pred             ECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654 5889999999999999998554

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG4257|consensus

Probab=99.56  E-value=2e-14  Score=113.11  Aligned_cols=119  Identities=20%  Similarity=0.244  Sum_probs=99.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCc--EEEEeEeecc-chhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGN--KVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+...+.+++++|.+|.||.+++.....|.  .||||+-+.. ..+..+.|+.|..+|+.++||+|++++|.|.. ++.|
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W  466 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW  466 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence            344567788999999999987654332333  6889998874 44557889999999999999999999999975 6789


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||.++.|.|..+|..+...++...+..++.||+.+|+-+.|
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS  509 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES  509 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999887789999999999999999995544

>KOG0578|consensus

Probab=99.56  E-value=1.7e-14  Score=111.74  Aligned_cols=114  Identities=18%  Similarity=0.223  Sum_probs=98.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|....-++.|+.|.+|.+.  ...+++.||+|.+........+-..+|+.+|+..+|+|||.++..|.-.+.+|+||||
T Consensus       274 ~y~~~~kigqgaSG~vy~A~--~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVAR--KISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhcchhhhccccccceeeee--eccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            34455668889999999886  6778889999999877655456678999999999999999999999989999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+.+...  .+++.++..+|++++.||++++.
T Consensus       352 m~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~  387 (550)
T KOG0578|consen  352 MEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHA  387 (550)
T ss_pred             cCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998754  48999999999999999998763

>KOG0616|consensus

Probab=99.55  E-value=1.7e-14  Score=104.17  Aligned_cols=118  Identities=19%  Similarity=0.191  Sum_probs=102.5

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..++.|.....++.|.+|.|.+..  ...+|..+|+|+++....   ...+...+|..+++.+.||.++++.+++.+.+.
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr--~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~  118 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVR--EKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN  118 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEE--EccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence            356667777889999999999887  667899999999998765   335567899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+||||++||.|+.+|++.+ .+++.....++.||+.|+.-.+
T Consensus       119 lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH  161 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLH  161 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHH
Confidence            999999999999999999866 5788888999999999998443

>KOG0198|consensus

Probab=99.55  E-value=4.1e-14  Score=105.19  Aligned_cols=117  Identities=21%  Similarity=0.238  Sum_probs=98.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC--cEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~--~~~lv~  142 (184)
                      .+...+.++.|.+|.|++..  ...+|...|+|.....+....+.+.+|+.++.+++|||||+.+|.....+  .+++.|
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~--~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLAT--NKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             hhhhhccccCccceEEEEEE--ecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            35566889999999999876  44558999999998765444667899999999999999999999755444  588999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccCC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHP  183 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~~  183 (184)
                      ||+++|+|.+++.+.+..+++.....+.+||++||+-+++.
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~  136 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK  136 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999998654789999999999999999987753

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=4.9e-14  Score=105.04  Aligned_cols=114  Identities=14%  Similarity=0.075  Sum_probs=95.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.|++|.+|.+.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++.+.+.+..+++|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVR--DRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             ceeeeeeecCCCeEEEEEE--EcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4555778889999999876  455688999999975432   23456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++...+ .+++.....++.|++.||+..++
T Consensus        81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~  119 (291)
T cd05612          81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHS  119 (291)
T ss_pred             eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998654 57888889999999999986554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0597|consensus

Probab=99.54  E-value=3.3e-14  Score=110.71  Aligned_cols=113  Identities=20%  Similarity=0.151  Sum_probs=99.1

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .|...+.++.|.+|.||++.  ..++.+.||+|.+.+...  .....+.+|+++++.++||||+.++..|+....+|+|.
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgr--rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGR--RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             chhHHHHhcCCccceeeecc--cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            45667889999999999987  778999999999987643  34567899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+.| +|..+|...+ .+++.+...++.|+..||.-++
T Consensus        81 e~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLh  117 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLH  117 (808)
T ss_pred             hhhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99998 9999998765 6899999999999999998433

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=6e-14  Score=108.26  Aligned_cols=114  Identities=17%  Similarity=0.114  Sum_probs=95.4

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.|++|.+|++.  ...+|+.||+|.+.....   .....+.+|+.++..++||||+++++.+.+.+..|+||
T Consensus         3 y~~~~~lG~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQ--KKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             ceEeEEEeecCCEEEEEEE--ECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4555778899999999876  566889999999976432   22456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.... .+++.....++.|++.||+..++
T Consensus        81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~  119 (377)
T cd05629          81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHK  119 (377)
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999997654 57888888899999999985543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PHA02988 hypothetical protein; Provisional

Probab=99.53  E-value=8.4e-14  Score=103.48  Aligned_cols=107  Identities=22%  Similarity=0.334  Sum_probs=87.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeec----CCcEEEEEe
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHCCLLTE  143 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~~~lv~e  143 (184)
                      .++.++.+.+|.+    .++|+.||+|.++.....   ..+.+.+|+.++.+++||||++++|++.+    ....+++||
T Consensus        27 ~i~~g~~~~v~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         27 LIKENDQNSIYKG----IFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             EEeeCCceEEEEE----EECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence            4566666666664    578999999999865432   24567899999999999999999998876    357899999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++.+.. .+++.....++.|++.||+..++
T Consensus       103 y~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~  140 (283)
T PHA02988        103 YCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYK  140 (283)
T ss_pred             eCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHh
Confidence            999999999998654 67889999999999999997664

>KOG0583|consensus

Probab=99.53  E-value=7.4e-14  Score=107.01  Aligned_cols=118  Identities=18%  Similarity=0.227  Sum_probs=99.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCC-CcchhhhheeeecC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLH-HDHLVKFIGACLDP  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~  135 (184)
                      ....+.+...++.|.++.++.+.  ...+|..||+|.++....     ...+...+|+.+++.+. ||||++++..+...
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~--~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~   92 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAK--HRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP   92 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEee--eccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence            34556777889999999999887  667889999998776422     12344568999999999 99999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+|+||||+.+|+|++++.+ ...+.+.....+++|++.|++-.|+
T Consensus        93 ~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~  138 (370)
T KOG0583|consen   93 TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHS  138 (370)
T ss_pred             CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998 4578888899999999999996554

>KOG4717|consensus

Probab=99.52  E-value=4.1e-14  Score=109.33  Aligned_cols=111  Identities=18%  Similarity=0.169  Sum_probs=96.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh--hHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL--TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~--~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |++.+.++.|.+.-|-++.  ++.+|.+||||++++...+.  ...+.+|++.|+..+|||||++++.......+|++.|
T Consensus        20 YDLekTlG~GHFAVVKLAr--HVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLAR--HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             ehhhhhhcCCceehhhhhh--hhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            5666777777766666655  88999999999999876643  4568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      .-++|+|++|+.++...+.+....++..||..|+.
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~  132 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAIS  132 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence            99999999999998888999999999999999876

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=9.1e-14  Score=105.49  Aligned_cols=114  Identities=23%  Similarity=0.168  Sum_probs=95.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.+.+.++.|++|.+|.+.  ...+++.||+|.++....   .....+..|+.++..++|+||+++++.+...+..|++|
T Consensus         3 y~~~~~ig~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAK--KKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             cEEEEEEeecCCeEEEEEE--ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            5566778899999999876  445688999999986532   23456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.... .+++.+...++.|++.||+..++
T Consensus        81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~  119 (333)
T cd05600          81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHE  119 (333)
T ss_pred             eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 57888899999999999986543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.52  E-value=9.5e-14  Score=102.65  Aligned_cols=91  Identities=19%  Similarity=0.260  Sum_probs=79.0

Q ss_pred             cEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHH
Q psy8884          92 NKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMN  171 (184)
Q Consensus        92 ~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~  171 (184)
                      ..|++|.++.........+..|..+++.++|+||+++++++...+..++||||+++|+|..++......+++..+..++.
T Consensus        45 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~  124 (274)
T cd05076          45 LRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQ  124 (274)
T ss_pred             eeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence            47899999766544456788899999999999999999999999999999999999999999976555788999999999


Q ss_pred             HHHHHhhhccC
Q psy8884         172 KAAFNRVLRIH  182 (184)
Q Consensus       172 qi~~gl~~~~~  182 (184)
                      ||++||+..++
T Consensus       125 qi~~~l~~lH~  135 (274)
T cd05076         125 QLASALSYLED  135 (274)
T ss_pred             HHHHHHHHHHc
Confidence            99999996554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.52  E-value=9.1e-14  Score=106.75  Aligned_cols=114  Identities=15%  Similarity=0.100  Sum_probs=95.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |+..+.++.|++|.+|++.  ...+++.||+|.++....   .....+..|+.++..++|+||+++++.+.+.+..|++|
T Consensus         3 y~~~~~LG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQ--KKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEE--ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4556778899999999876  556788999999986432   22445778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+.+ .+++.....++.|++.||+..++
T Consensus        81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~  119 (363)
T cd05628          81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQ  119 (363)
T ss_pred             cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999997654 68899999999999999985543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=1.3e-13  Score=102.06  Aligned_cols=116  Identities=15%  Similarity=0.088  Sum_probs=98.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.++.+.+|.+.  ...++..+|+|.++.......+.+..|+.+++.++|+|++++++.+..++..+++||
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQ--HKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEE--EcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            345666778889999998876  334688999999986655555678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++.+....+++.....++.|++.||+..+
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh  120 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH  120 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999875557899999999999999998543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=1.1e-13  Score=105.04  Aligned_cols=116  Identities=14%  Similarity=0.029  Sum_probs=96.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|.+.+.++.|++|.||...  ...+++.||+|.++....   .....+..|..++..++|+||+++++.+.+++..|++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVK--MKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CceEEEEEEecCCeEEEEEE--ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence            35566778899999998876  556788999999975332   2234577899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++.+....+++.....++.||+.||+..++
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~  120 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ  120 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999997655568899999999999999985543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.52  E-value=9.5e-14  Score=107.09  Aligned_cols=114  Identities=14%  Similarity=0.110  Sum_probs=95.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.+...++.|++|.||++.  ...+++.||+|.+.....   .....+.+|+.+++.+.|+||+++++.+...+..+++|
T Consensus         3 y~~~~~lG~G~~g~V~~a~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVR--KVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEE--ECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            4556778899999999876  556789999999975432   22455778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+.+ .+++.....++.||+.||+..++
T Consensus        81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~  119 (376)
T cd05598          81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHK  119 (376)
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 57888888899999999985543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0610|consensus

Probab=99.51  E-value=1.4e-13  Score=103.42  Aligned_cols=118  Identities=17%  Similarity=0.154  Sum_probs=100.1

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ....++.|.+...++.|.-|.||++.  ...++..+|+|++++....   .......|..+|+.++||-++.|+..+...
T Consensus        72 ~~l~l~~f~llk~LG~GdiG~VyL~~--l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~  149 (459)
T KOG0610|consen   72 GSLGLRHFRLLKRLGCGDIGTVYLVE--LRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD  149 (459)
T ss_pred             CccCHHHHHHHHHcCCCCceeEEEEE--ecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence            44567778888899999999999987  4445689999999876553   234566788999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      ...+++||||+||+|..++++. +..+++.....++..|+-||.
T Consensus       150 ~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALE  193 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALE  193 (459)
T ss_pred             ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHH
Confidence            9999999999999999999865 457888888889999998887

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.51  E-value=1.1e-13  Score=106.92  Aligned_cols=113  Identities=13%  Similarity=0.124  Sum_probs=95.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.|++|.||++.  ...++..+|+|.++....   .....+..|+.++..++|+||+++++.+.+.+..+++|
T Consensus         3 f~~~~~LG~G~~g~Vy~~~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLAC--KVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             ceEEEEEeecCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            4455778999999999876  556788999999986533   23456789999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.+.. .+++.....++.||+.||..++
T Consensus        81 E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH  118 (381)
T cd05626          81 DYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH  118 (381)
T ss_pred             ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 5788888889999999998554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.51  E-value=1.7e-13  Score=103.73  Aligned_cols=109  Identities=19%  Similarity=0.095  Sum_probs=91.4

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|++.  ...+|..||+|.++....   .....+..|+.+++.++|||++++++.+...+..++||||+++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           2 LLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             eeeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence            46778888898876  556789999999986532   2234567899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|..++...+ .+++.....++.||+.||+..++
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~  113 (323)
T cd05595          80 GELFFHLSRER-VFTEERARFYGAEIVSALEYLHS  113 (323)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999887654 57899999999999999985543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.51  E-value=1.4e-13  Score=106.41  Aligned_cols=114  Identities=12%  Similarity=0.096  Sum_probs=95.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.....++.|++|.||++.  ...+++.+|+|.+.....   .....+.+|+.+++.++|+||+++++.+.+.+..|+||
T Consensus         3 f~~~~~LG~G~~g~Vy~a~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLAR--KVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEE--ECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            4455778999999999876  556788999999986532   23456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+.+ .+++.....++.||+.||+..++
T Consensus        81 E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~  119 (382)
T cd05625          81 DYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHK  119 (382)
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999997654 57888888999999999985543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.51  E-value=2.4e-13  Score=103.26  Aligned_cols=115  Identities=15%  Similarity=0.079  Sum_probs=97.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|++|.+|.+.  ...++..+|+|.++.... .....+.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVS--HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhheeccccCCCCEEEEEEE--ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            456677888999999999876  556788999999876432 33456889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.... .+++.....++.|+++||+..+
T Consensus        83 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH  120 (333)
T cd06650          83 EHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR  120 (333)
T ss_pred             ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 5788888999999999998655

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.51  E-value=2.3e-13  Score=99.39  Aligned_cols=115  Identities=20%  Similarity=0.171  Sum_probs=94.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+++.+.++.|+++.+|.+.+   ..+..+|+|.++..... ...+..|+.+++.++|||++++++.+...+..+++||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~---~~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKW---RAQIKVAIKAINEGAMS-EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEe---ccCceEEEEecccCCcc-HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            4456667788899998888642   34568999998754332 4568889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++......+++.....++.|++.||+..++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  118 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLER  118 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999997654468899999999999999986543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.50  E-value=1.1e-13  Score=106.87  Aligned_cols=96  Identities=27%  Similarity=0.268  Sum_probs=77.7

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      +..+.+.+.+.++.|++|.||.+.+.   ....+..||+|.++.... ...+.+.+|+.++..+ .||||+++++.+...
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~  111 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG  111 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence            34456778899999999999887521   123456899999975432 3345688999999999 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~  156 (184)
                      +..+++|||+++|+|.+++..
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             CcceeeehhccCCcHHHHHHh
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.50  E-value=3e-13  Score=98.53  Aligned_cols=109  Identities=20%  Similarity=0.224  Sum_probs=91.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      .++.|+.|.+|.+.  ....++.+|+|.+..... .....+.+|+.+++.++|+|++++++.+...+..++++||+++++
T Consensus         2 ~lg~g~~g~vy~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           2 RIGRGNFGEVFSGR--LRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             ccCcccCccEEEEE--EecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            46678888888876  445788999998875432 334568899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+++......+++.....++.|+++||+.++
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH  111 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLE  111 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999766556889999999999999998654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.50  E-value=2.6e-13  Score=103.01  Aligned_cols=116  Identities=14%  Similarity=0.058  Sum_probs=97.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.....++.|++|.++...  ...+|..+|+|.++.... .....+.+|+.+++.++|+|++++++.+...+..+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQ--HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEE--ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            456666778999999998876  556788999999976432 33556889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.... .+++.....++.|++.||+..++
T Consensus        83 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~  121 (331)
T cd06649          83 EHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLRE  121 (331)
T ss_pred             ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999997654 57889999999999999986553

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.50  E-value=2.2e-13  Score=103.07  Aligned_cols=109  Identities=20%  Similarity=0.094  Sum_probs=91.5

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|.+.  ...+|+.+|+|.++....   .....+.+|+.+++.+.||||+++.+.+...+..+++|||+++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           2 LLGKGTFGKVILVR--EKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            46778888899876  556789999999986532   2234577899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|.+++.... .+++.....++.||+.||+..++
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~  113 (323)
T cd05571          80 GELFFHLSRER-VFSEDRARFYGAEIVSALGYLHS  113 (323)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999997654 57899999999999999985543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0593|consensus

Probab=99.50  E-value=1.2e-13  Score=100.25  Aligned_cols=112  Identities=20%  Similarity=0.134  Sum_probs=94.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |+....+++|.+|.|+++.  ...+|+.||||.+..+..  ...+-.++|++++++++|+|+|.+++.|.....+++|+|
T Consensus         4 YE~LgkvGEGSYGvV~KCr--nk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCR--NKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             HhhhhccccCcceEEEEec--cCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            4445678889999999987  778899999999976532  334456899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ||+. ++.+.|.....++++....+++.|+++|+...
T Consensus        82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~c  117 (396)
T KOG0593|consen   82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFC  117 (396)
T ss_pred             ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhh
Confidence            9998 56666766666789999999999999999843

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.49  E-value=2.2e-13  Score=103.30  Aligned_cols=115  Identities=17%  Similarity=0.070  Sum_probs=97.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.+.+.++.|+++.+|.+.  ...+|+.+|+|.++....   .....+..|+.++..+.|+|++++++.+.+.+..+++|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVR--EKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             ceEEEEEEeccCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            5566778899999999876  556789999999986533   23455778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+....+++.....++.|+++||...++
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~  120 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ  120 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998765578999999999999999986543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0032|consensus

Probab=99.49  E-value=2.1e-13  Score=104.68  Aligned_cols=116  Identities=19%  Similarity=0.145  Sum_probs=101.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCC-CcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~  138 (184)
                      .+.|.+.+.++.|.+|.++.+.  ...+|+.+|+|.++.....   ....+.+|+.+|+.+. |||++.+.+.+.+.+.+
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~--~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCR--EKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEE--ecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            3456777889999999999987  5567999999999876553   2457899999999998 99999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||++.||+|.+.+...  .+++.....++.||+.++...|+
T Consensus       112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~  153 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHS  153 (382)
T ss_pred             EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999876  38999999999999999986665

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.49  E-value=2.7e-13  Score=103.30  Aligned_cols=119  Identities=19%  Similarity=0.121  Sum_probs=97.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeec-CcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKE-GNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ...+.|.+...++.|++|.+|.+.  .... +..||+|.+.....   .....+.+|+.++..++||||+++++.+...+
T Consensus        27 ~~~~~y~~~~~ig~G~~g~Vy~a~--~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         27 MKYEDFNFIRTLGTGSFGRVILAT--YKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CChhhcEEEEEEeecCCeEEEEEE--EECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            456667778889999999999875  2222 35899999975432   23456788999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|||+++|+|.+++.... .+++.....++.|++.||+..++
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~  149 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQS  149 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997654 57889999999999999986543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.49  E-value=2.9e-13  Score=100.74  Aligned_cols=117  Identities=17%  Similarity=0.098  Sum_probs=97.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ++.|...+.++.|++|.+|.+.  ...++..||+|.++.... .....+.+|+.+++.++|+||+++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGR--SKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEE--ECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            4556677888999999999876  556788999999975432 2244677899999999999999999999988899999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++ +|.+++......+++.....++.||++||+..++
T Consensus        82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~  121 (288)
T cd07871          82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK  121 (288)
T ss_pred             EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999985 8999987766567889999999999999996654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0598|consensus

Probab=99.49  E-value=1.2e-13  Score=102.29  Aligned_cols=118  Identities=17%  Similarity=0.089  Sum_probs=101.8

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|.+...++.|++|.|+...  ...+++.+|+|++++..+.   ......+|..++..++||.|++++..|++++.
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vr--k~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k   99 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVR--KKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK   99 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEE--EcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence            356778888999999999999987  5578999999999987652   24557899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|+||+.||.|...|.+++ .+++....-++..|+.||.-++
T Consensus       100 LylVld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH  142 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLH  142 (357)
T ss_pred             EEEEEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHH
Confidence            999999999999999998766 5677777778889999998544

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.49  E-value=2.7e-13  Score=102.93  Aligned_cols=116  Identities=13%  Similarity=-0.007  Sum_probs=96.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|.+.+.++.|++|.+|...  ...+++.||+|.++....   .....+..|..++..+.|+||+++++.+...+..|++
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVK--MKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            35566778999999999876  556788999999976432   2234577889999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++.+....+++.....++.|++.||...++
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~  120 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ  120 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998755568888899999999999986543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.49  E-value=3.1e-13  Score=102.44  Aligned_cols=109  Identities=21%  Similarity=0.105  Sum_probs=91.5

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|++.  +..+|..||+|.++....   .....+.+|+.+++.+.||||+++.+.+...+..++||||+++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           2 LLGKGTFGKVILVR--EKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             eeeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            36778888888876  556789999999986432   2345678899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|..++.... .+++.+...++.||+.||+.+++
T Consensus        80 g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~  113 (328)
T cd05593          80 GELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHS  113 (328)
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999887654 57899999999999999986543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0588|consensus

Probab=99.49  E-value=1e-13  Score=109.47  Aligned_cols=114  Identities=18%  Similarity=0.149  Sum_probs=98.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ....+.+...++.|+.|.+-++.  +..+|+.+|||.+..+..   .......+|+.+|+.+.|||++.++..+.....+
T Consensus        10 tiGpwkLgkTLG~Gstg~vrlak--h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~l   87 (786)
T KOG0588|consen   10 TIGPWKLGKTLGKGSTGCVRLAK--HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHL   87 (786)
T ss_pred             cccceeccccccCCCCceehhhh--cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceE
Confidence            44556778888889888888776  778999999999987632   2244578999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      |+|.||+++|.|++++...+ .+++....++..||+.|++
T Consensus        88 ylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~  126 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVS  126 (786)
T ss_pred             EEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHH
Confidence            99999999999999998766 5777888899999999997

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.49  E-value=3.5e-13  Score=101.27  Aligned_cols=114  Identities=15%  Similarity=0.044  Sum_probs=95.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      |...+.++.|+++.++...  ...++..+|+|.++.... .....+.+|+.++..++||||+++++.+...+..++++||
T Consensus         3 ~~~~~~lg~G~~g~v~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVL--HRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             ceEEeeccCCCCeEEEEEE--EcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4556778889999888876  455678899999875432 2345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++.+.. .+++.....++.|+++||+..++
T Consensus        81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~  117 (308)
T cd06615          81 MDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLRE  117 (308)
T ss_pred             cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999997653 57889999999999999997653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.49  E-value=3.1e-13  Score=105.09  Aligned_cols=96  Identities=27%  Similarity=0.328  Sum_probs=77.3

Q ss_pred             cCccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC-CcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH-HDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~  135 (184)
                      +..+.+.+.+.++.|++|.||.+...+.   ..+..||+|.++.... ...+.+.+|+.++..+. ||||+++++++...
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            3456677778999999999998753221   2235799999976433 33467889999999996 99999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~  156 (184)
                      +..|++|||+++|+|.+++..
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHH
Confidence            999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.49  E-value=2.6e-13  Score=104.52  Aligned_cols=118  Identities=14%  Similarity=0.069  Sum_probs=97.9

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|...+.++.|++|.+|++.  ...++..+|+|.++....   .....+..|+.+++.++|||++++++++.+++.
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVR--HKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            345667777889999999999876  556788999999975432   223446789999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++|+|.+++.+.  .+++.....++.|++.||+.+++
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~  160 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHS  160 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998764  36788888899999999986654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=3.3e-13  Score=101.61  Aligned_cols=107  Identities=13%  Similarity=0.025  Sum_probs=89.4

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|++|.+|.+.  ...+++.||+|.++....   .....+..|+.++..++||||+++++.+...+..+++|||+++|+
T Consensus         2 g~G~~g~Vy~~~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           2 GKGSFGKVMQVR--KRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CcCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            567888888876  455688999999976432   224557789999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++...+ .+++.....++.|+++||+..++
T Consensus        80 L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~  111 (312)
T cd05585          80 LFHHLQREG-RFDLSRARFYTAELLCALENLHK  111 (312)
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999997654 57899999999999999986543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0199|consensus

Probab=99.48  E-value=5e-14  Score=112.10  Aligned_cols=113  Identities=22%  Similarity=0.212  Sum_probs=95.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCc--EEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGN--KVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ...+.++++.|.+|.|..+.|.. ..|+  .||||+++..... ...+|++|+.+|.+++|+|+++++|...+ ...++|
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~-psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQ-PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccC-CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            35567889999988888877653 3444  7899999976553 57789999999999999999999999887 788999


Q ss_pred             EeecCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHhhh
Q psy8884         142 TEYCPKGSLQDILEN-EQFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~-~~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      +|.++.|||.+.|++ ....+-...+..++.|||.||+.
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~Y  227 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQY  227 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHH
Confidence            999999999999987 44566778889999999999984

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=2.6e-13  Score=103.55  Aligned_cols=114  Identities=18%  Similarity=0.125  Sum_probs=96.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.|++|.+|.+.  ...+|+.||+|.++....   .....+..|+.++..+.|+|++++++.+.+.+..++||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVR--DKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEE--ECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4556778899999999876  455789999999986532   23456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+. ..+++.....++.||+.||+.+++
T Consensus        81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~  119 (350)
T cd05573          81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHK  119 (350)
T ss_pred             cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999875 368899999999999999986554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=3.2e-13  Score=100.35  Aligned_cols=114  Identities=15%  Similarity=0.003  Sum_probs=93.9

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      .....++.|++|.+|.+.  +..+++.||+|.+......   ....+.+|+.+++.++|+|++++++.+..++..+++||
T Consensus         3 ~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           3 RHYRVLGKGGFGEVCACQ--VRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             eEEEEEecCCCeEEEEEE--EcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            445668889999998876  5567889999999764332   23456789999999999999999999998899999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++... ...+++.....++.|++.||...++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  120 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR  120 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999888653 3468899999999999999986654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.48  E-value=3.1e-13  Score=103.68  Aligned_cols=114  Identities=15%  Similarity=0.119  Sum_probs=95.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.....++.|++|.||.+.  ...+++.||+|.++....   .....+..|+.++..++|+|++++++.+.+.+..++||
T Consensus         3 f~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQ--KKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4555778899999999876  556788999999985432   23456778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+.+ .+++.....++.|++.||+..++
T Consensus        81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~  119 (360)
T cd05627          81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQ  119 (360)
T ss_pred             eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 57888899999999999985543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.48  E-value=5.1e-13  Score=98.25  Aligned_cols=116  Identities=16%  Similarity=0.116  Sum_probs=95.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.....++.|++|.+|.+.  ...++..||+|.+........+.+.+|+.+++.++|+|++++++.+..++..++++||
T Consensus         9 ~~~~~~~lg~g~~g~v~~~~--~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624           9 ENGERVVLGKGTYGIVYAAR--DLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             cCCceEEEecCCceEEEEeE--ecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence            33444568888888888875  4456778999998876555566788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCC--CHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKL--EPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l--~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++......+  ++.....++.||+.||+..++
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  126 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD  126 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998654344  788888999999999996654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.48  E-value=3.8e-13  Score=100.76  Aligned_cols=119  Identities=18%  Similarity=0.179  Sum_probs=93.9

Q ss_pred             cccccchhhhhhcccceeeeccee--------------eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhh
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL--------------LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKF  128 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l  128 (184)
                      ..+.+.+.++.|++|.+|.+.+..              ..++..||+|.++.... .....+.+|+.++..++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            345666778999999999875221              11344799999986532 335578899999999999999999


Q ss_pred             heeeecCCcEEEEEeecCCCCHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         129 IGACLDPPHCCLLTEYCPKGSLQDILENEQ------------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       129 ~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~------------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++.+.+..+++|||+++|+|.+++....                  ..+++.....++.||+.||+.+++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  156 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS  156 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            999999899999999999999999986421                  235778889999999999996543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.47  E-value=5.2e-13  Score=98.99  Aligned_cols=118  Identities=24%  Similarity=0.228  Sum_probs=95.7

Q ss_pred             ccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCCL  140 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~l  140 (184)
                      .+.+.+.++.|++|.+|.+.+.  +...+..||+|.++.........+.+|+.+++.++|+|++++.+.+..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            3455677899999999876532  234678999999987655556678899999999999999999987654  356899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|.+++.+....+++.....++.|++.||+.++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~  126 (284)
T cd05081          85 VMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS  126 (284)
T ss_pred             EEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999997655568899999999999999986543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0607|consensus

Probab=99.47  E-value=1.1e-13  Score=101.37  Aligned_cols=109  Identities=13%  Similarity=0.118  Sum_probs=97.6

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      +++++|++++|-..+  .+++|..+|||++.+........+.+|+.++.+. .|+||+.++.+|++.+.+|+|+|-|.||
T Consensus        84 e~LGeGAyasVqtcv--~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG  161 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCV--SIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG  161 (463)
T ss_pred             HHhcCccceeeeeee--eeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence            678899999988887  8899999999999987656677899999999998 5999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|...+.+.. .+++...-.+..+|+.||.+++
T Consensus       162 plLshI~~~~-~F~E~EAs~vvkdia~aLdFlH  193 (463)
T KOG0607|consen  162 PLLSHIQKRK-HFNEREASRVVKDIASALDFLH  193 (463)
T ss_pred             hHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHh
Confidence            9999998755 6788888899999999998654

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.47  E-value=3.4e-13  Score=103.86  Aligned_cols=118  Identities=14%  Similarity=0.053  Sum_probs=97.8

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|...+.++.|++|.+|.+.  ...+++.+|+|.++....   .....+..|+.+++.++||||+++++.+.+++.
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVR--HKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            345667777889999999999876  556788999999975332   223457789999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .|+||||+++|+|.+++...  .+++.....++.||+.||+..++
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~  160 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHS  160 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999754  47888899999999999986543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.47  E-value=4.6e-13  Score=101.42  Aligned_cols=111  Identities=13%  Similarity=0.131  Sum_probs=89.1

Q ss_pred             hhhhhh--cccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          70 SLMHDI--VKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        70 ~~~~~~--~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      +.++.|  +.+.++...  ...+|+.||+|.++....  .....+..|+.+++.++||||+++++.+..++..++++||+
T Consensus         4 ~~ig~G~~~~~~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           4 TVIGRGFEDLMTVNLAR--YKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhccccccceEEEEEEe--ecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            456666  334566654  556789999999986532  23445778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|++.+++... ...+++..+..++.|++.||+.+++
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  119 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH  119 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999754 3358899999999999999996653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.47  E-value=4.8e-13  Score=101.24  Aligned_cols=109  Identities=20%  Similarity=0.090  Sum_probs=91.6

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|.+.  ...+|..||+|.++....   .....+..|+.++..+.|+||+++.+.+...+..++||||+++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           2 LLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             eeeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46778888898876  556789999999986532   2234567899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|..++.... .+++.....++.||+.||+..++
T Consensus        80 ~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~  113 (325)
T cd05594          80 GELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS  113 (325)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999887654 57899999999999999997764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.47  E-value=7.7e-13  Score=97.29  Aligned_cols=116  Identities=17%  Similarity=0.133  Sum_probs=94.3

Q ss_pred             ccccchhhhhhcccceeeecceeeec---CcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKE---GNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .+.+.+.++.|++|.+|.+.  ....   +..+|+|.++.... .....+..|+.++..++|||++++++.+...+..++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~--~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           5 CIKIEKVIGAGEFGEVCSGR--LKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HeEeeeeecccCCCceEEEE--EecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            44566778889999988865  2222   33799999875432 234578899999999999999999999998899999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||+++|+|.+++......+++.+...++.|++.|++..++
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  124 (267)
T cd05066          83 VTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD  124 (267)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998765568899999999999999985543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.47  E-value=5.7e-13  Score=99.01  Aligned_cols=114  Identities=15%  Similarity=0.005  Sum_probs=94.2

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ...+.++.|++|.+|.+.  ...+|+.||+|.++.....   ....+.+|+.++..+.|++++++.+.+.+.+..++++|
T Consensus         3 ~~~~~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           3 RHYRVLGKGGFGEVCACQ--VRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             eEEEEEecCCCEEEEEEE--EecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            345678889999998876  5567899999999765332   23357789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|..++... ...+++.....++.|++.||+..++
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  120 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR  120 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999888643 3357899999999999999996654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.47  E-value=6.3e-13  Score=97.65  Aligned_cols=119  Identities=18%  Similarity=0.135  Sum_probs=96.9

Q ss_pred             cccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.++..+.++.|++|.+|.+.+... .....||+|.++.... .....+.+|+.++..++|+|++++++.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            4466778889999999998763211 1245899999876433 3345688999999999999999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++......+++.+...++.|++.|++.+++
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~  124 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE  124 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998765578999999999999999986543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.46  E-value=7e-13  Score=97.39  Aligned_cols=115  Identities=20%  Similarity=0.161  Sum_probs=95.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.....++.|+.+.+|.+.  ...++..+|+|.++.........+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus        10 ~y~~~~~lg~g~~g~vy~~~--~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646          10 DYELIQRVGSGTYGDVYKAR--NLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hcchhheeecCCCeEEEEEE--ECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            45666778888888888876  4567889999999765433345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++.... .+++.....++.|+++||...++
T Consensus        88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~  124 (267)
T cd06646          88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHS  124 (267)
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987644 57889999999999999985543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4721|consensus

Probab=99.46  E-value=9.9e-14  Score=108.30  Aligned_cols=100  Identities=20%  Similarity=0.416  Sum_probs=86.9

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.++.|+.|-||.+    ...++.||||.++..+       ..++..|++++|+||+.+.|.|.....++|+||||..|-
T Consensus       130 eWlGSGaQGAVF~G----rl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLG----RLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhccCcccceeee----eccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence            55888999999985    4788999999887543       356788999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+.|+..+ .+....++.+..+||.||.-++
T Consensus       199 L~~VLka~~-~itp~llv~Wsk~IA~GM~YLH  229 (904)
T KOG4721|consen  199 LYEVLKAGR-PITPSLLVDWSKGIAGGMNYLH  229 (904)
T ss_pred             HHHHHhccC-ccCHHHHHHHHHHhhhhhHHHH
Confidence            999998755 6788889999999999998544

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.46  E-value=6.9e-13  Score=97.59  Aligned_cols=115  Identities=17%  Similarity=0.136  Sum_probs=94.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecC---cEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEG---NKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .+.+.+.++.|++|.+|.+.  ....+   ..||+|.++... ......+..|+.+++.+.|||++++.+.+...+..++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~--~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGR--LKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEE--EecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            45566788899999999875  22223   369999997642 2335678999999999999999999999998899999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||+++|+|.+++......+++.+...++.|++.|++..+
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH  123 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS  123 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876556889999999999999998543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.46  E-value=8.3e-13  Score=96.95  Aligned_cols=112  Identities=18%  Similarity=0.262  Sum_probs=93.8

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +..+.++.++.|.+|.+.  +..++..+|+|.++....      .....+.+|+..++.++|+|++++++.+..++..++
T Consensus         3 ~~~~~lg~g~~~~v~~~~--~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           3 LKGQQLGTGAFSSCYQAR--DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             cccceecCcCceEEEEEE--EcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            445678889999988765  556788999999975331      124568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||+++++|.+++.+.+ .+++.....++.|++.||+..+
T Consensus        81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH  120 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH  120 (268)
T ss_pred             EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999997654 5788999999999999998654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.46  E-value=6.4e-13  Score=97.58  Aligned_cols=112  Identities=16%  Similarity=0.210  Sum_probs=90.0

Q ss_pred             hhhhhcccceeeeccee----------eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          71 LMHDIVKFNGYLKTKEL----------LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~----------~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .++.|+++.+|.+....          ......+++|.++.........+..|+.+++.++||||+++++++......++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            35677777777764211          12334789999877655555678889999999999999999999998888999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||+++|++..++......+++.....++.||++||+.+++
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  123 (262)
T cd05077          82 VEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED  123 (262)
T ss_pred             EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999987655568999999999999999996654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.46  E-value=6.7e-13  Score=97.10  Aligned_cols=114  Identities=18%  Similarity=0.170  Sum_probs=93.3

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+.+.++.|+.+.+|.+.+.   .+..+|+|.++..... ...+.+|+.++..++|||++++++++...+..+++|||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~---~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY   80 (256)
T ss_pred             HeEEeeEecCcccceEEEEEec---CCCcEEEEEcCCCccc-HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence            4556677888888888876421   2346999998865432 45688999999999999999999999888899999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+|+|.+++......+++.++..++.||+.||+..++
T Consensus        81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~  118 (256)
T cd05113          81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES  118 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999998655568999999999999999986543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.46  E-value=6.3e-13  Score=100.83  Aligned_cols=109  Identities=15%  Similarity=0.099  Sum_probs=89.9

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...++..||+|.++....   .....+..|..++..+ +||||+++++++.+.+..|++|||++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           2 VIGRGSYAKVLLVE--LKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             eEeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            35778888888876  455788999999986533   2234577888888888 79999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++...+ .+++.....++.|++.||+.+++
T Consensus        80 ~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~  114 (329)
T cd05588          80 GGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHE  114 (329)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887654 68999999999999999985543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.46  E-value=8.1e-13  Score=98.35  Aligned_cols=114  Identities=19%  Similarity=0.174  Sum_probs=95.4

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.+.+.++.++.+.+|.+.  ....++.+|+|.++....   .....+.+|+.+++.++|||++++++.+...+..+++|
T Consensus         3 y~~~~~ig~g~~~~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVR--HKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             eEEEEEeecCCCeEEEEEE--EcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4566778888888888876  445788999999976432   23456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.... .+++..+..++.|+++||+..++
T Consensus        81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~  119 (290)
T cd05580          81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHS  119 (290)
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 68899999999999999986543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG1989|consensus

Probab=99.46  E-value=2e-13  Score=110.35  Aligned_cols=116  Identities=21%  Similarity=0.238  Sum_probs=95.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Ccchhhhhee-eec---C---C
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGA-CLD---P---P  136 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~-~~~---~---~  136 (184)
                      .+.+...+.+||+..||++.  ....|..+|+|.+-..+........+|+.+|+.|. |+|||.+++. ...   .   -
T Consensus        38 ~v~V~~vLAEGGFa~VYla~--~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQ--DVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEE--ecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            35667889999999999987  55666999999998776666788999999999996 9999999983 221   1   2


Q ss_pred             cEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++|.||||.+|+|-+++... ...|++.++++|+.|+|+|++..|.
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~  162 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY  162 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence            577999999999999999743 3358999999999999999996653

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.46  E-value=8e-13  Score=97.08  Aligned_cols=115  Identities=20%  Similarity=0.165  Sum_probs=97.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+...+.++.|+.+.+|.+.  ...+++.+|+|.++.........+.+|+.+++.++|||++++++.+...+..++++|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKAR--NVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEE--EcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            456677888999999998875  455788999999986654444567789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++...+ .+++.+...++.|++.|+...+
T Consensus        87 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH  123 (267)
T cd06645          87 FCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH  123 (267)
T ss_pred             ccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999987654 6889999999999999998554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.45  E-value=4.6e-13  Score=103.31  Aligned_cols=96  Identities=28%  Similarity=0.321  Sum_probs=77.5

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      +..+.+.+.+.++.|++|.+|.+.+.   ....+..||+|.++.... .....+.+|+.+++.+ .|+||+++++.+...
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            34556778888999999999886521   123445899999986533 3345688999999999 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~  156 (184)
                      +..+++|||+++|+|.+++..
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHh
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.45  E-value=3.6e-13  Score=102.35  Aligned_cols=93  Identities=24%  Similarity=0.336  Sum_probs=73.7

Q ss_pred             cccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC-Cc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP-PH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~-~~  137 (184)
                      +.+.+.+.++.|++|.||.+...   ....+..||+|.++.... .....+.+|+.++..+ +||||+++++.+... +.
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP   86 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence            45677788999999999987521   123456899999975432 3345688999999999 899999999988764 46


Q ss_pred             EEEEEeecCCCCHHHHHhh
Q psy8884         138 CCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~  156 (184)
                      ++++|||+++|+|.+++..
T Consensus        87 ~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          87 LMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             eEEEEecCCCCcHHHHHHh
Confidence            8999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.45  E-value=1.3e-12  Score=97.37  Aligned_cols=116  Identities=16%  Similarity=0.127  Sum_probs=98.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+...++.++.+.+|.+.  ...++..+++|.+..........+..|+..++.++|+|++++.+.+...+..+++||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEE--ECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            345566778888888888875  555788999999987655556778899999999999999999999988899999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |++++++..++.+....+++.....++.|++.|++..+
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH  127 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH  127 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999888765556899999999999999998544

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.45  E-value=1.4e-12  Score=95.73  Aligned_cols=114  Identities=19%  Similarity=0.238  Sum_probs=94.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+...++.|+++.+|.+.  ....+..+|+|.++.... ....+.+|+.+++.++|+|++++++.+...+..+++|||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~--~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGV--WKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             HeEEeeecCCcccceEEEEE--EecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            35566778888888888876  344688999999876433 245688999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|+|.+++... ...+++..+..++.|+++||+.++
T Consensus        84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH  121 (263)
T cd05052          84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE  121 (263)
T ss_pred             CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999754 345789999999999999998554

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=1.4e-12  Score=95.45  Aligned_cols=115  Identities=22%  Similarity=0.194  Sum_probs=97.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|...+.++.++.+.+|.+.  ...++..+++|.+........+.+.+|+.+++.++|+|++++++.+...+..+++|||
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKAR--DIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ceEEEEEecCCCceEEEEeE--ecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            45556778888888888875  3446788999999876555567788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++......+++.+...++.|++.||+..+
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh  118 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH  118 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876457899999999999999998543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.44  E-value=3.3e-13  Score=98.77  Aligned_cols=111  Identities=18%  Similarity=0.211  Sum_probs=91.0

Q ss_pred             hhhhhcccceeeeccee-----eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          71 LMHDIVKFNGYLKTKEL-----LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~-----~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      .++.|+++.+|.+....     .....++++|.+........+.+..|+.+++.+.|||++++++.+..++..+++|||+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   81 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV   81 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence            46678888888875321     2234568888887665555667888999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|+|.+++......+++.....++.||+.||+..+
T Consensus        82 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  117 (258)
T cd05078          82 KFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE  117 (258)
T ss_pred             CCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999876657899999999999999998554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.44  E-value=1.1e-12  Score=97.92  Aligned_cols=113  Identities=19%  Similarity=0.187  Sum_probs=92.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-----hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-----LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-----~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      |.+.+.++.|+.+.+|.+.  ...+|..||+|.++.....     ....+..|+.+++.++|+|++++++.+.+.+..++
T Consensus         2 y~~~~~lg~g~~~~vy~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKAR--DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             ceeeeeeeeccccEEEEEE--ECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence            3445667888888888876  4456889999999865432     23456789999999999999999999999899999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||||+ +|+|.+++......+++.....++.||++||+..+
T Consensus        80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH  119 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH  119 (298)
T ss_pred             EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999 89999999765446899999999999999998554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG4250|consensus

Probab=99.44  E-value=2.4e-13  Score=107.99  Aligned_cols=110  Identities=22%  Similarity=0.216  Sum_probs=93.1

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC------CcEEE
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP------PHCCL  140 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------~~~~l  140 (184)
                      ..+.++.|++|.||.+.  +..+|+.||+|.++.... ...+.+.+|+.++++++|+|||++.+.-.+.      ....+
T Consensus        17 ~~e~LG~Ga~g~V~rgr--nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGR--NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             ehhhhcCCccceeeeec--ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            44889999999999976  778999999999987543 4567789999999999999999998864432      34579


Q ss_pred             EEeecCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHhhh
Q psy8884         141 LTEYCPKGSLQDILENE--QFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~--~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      +||||++|||...|.+.  ..++++.+.+.+..+++.||..
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~  135 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRH  135 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999853  3579999999999999999973

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.44  E-value=8.1e-13  Score=102.73  Aligned_cols=94  Identities=27%  Similarity=0.314  Sum_probs=76.3

Q ss_pred             ccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCc
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPH  137 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~  137 (184)
                      .+.+.+.+.++.|++|.||.+.+.+   ...+..||+|.++.... ...+.+.+|+.++..+. |+||+++++.+...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            3456677889999999999876332   23456899999986432 23456889999999997 9999999999999899


Q ss_pred             EEEEEeecCCCCHHHHHhh
Q psy8884         138 CCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~  156 (184)
                      .++++||+++|+|.+++..
T Consensus       116 ~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             cEEEEeccCCCcHHHHHHh
Confidence            9999999999999999964

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.44  E-value=1.7e-12  Score=95.31  Aligned_cols=117  Identities=13%  Similarity=0.135  Sum_probs=95.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|.+.+.++.|+++.+|.+.  ...+++.||+|.++....   .....+.+|+.+++.++|||++++++.+...+..++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRAT--CLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEE--EeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence            345667778889999988876  555789999998865332   234567889999999999999999999998899999


Q ss_pred             EEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|.+++..   ....+++.+...++.|+++||+..++
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08228          80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS  124 (267)
T ss_pred             EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999988853   23457888899999999999986553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.44  E-value=1.4e-12  Score=95.20  Aligned_cols=114  Identities=15%  Similarity=0.109  Sum_probs=94.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |+..+.++.|++|.++...  +...+..+++|.+.....  .....+.+|+.+++.++|+|++++++++...+..++++|
T Consensus         2 y~~~~~ig~g~~g~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYR--RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             ceEeeEecccCCceEEEEE--EcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            3445678888888877765  667789999999875432  334568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++... ...+++.+...++.|+++||+..+
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  118 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH  118 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999765 446789999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.44  E-value=1.1e-12  Score=98.31  Aligned_cols=116  Identities=16%  Similarity=0.078  Sum_probs=95.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|++|.+|.+.  ...+++.||+|.++.... .....+.+|+.+++.++|+|++++++.+.+.+..+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGK--SKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEE--ECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence            456667788899999999876  455788999999975432 22345678999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||++ +++.+++......+++.....++.|++.||+..++
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  121 (303)
T cd07869          83 EYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ  121 (303)
T ss_pred             ECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9996 58888887665568888899999999999986554

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.44  E-value=1.1e-12  Score=97.45  Aligned_cols=114  Identities=19%  Similarity=0.093  Sum_probs=92.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |.+.+.++.|+++.+|.+.  ...++..+|+|.++....  .....+.+|+.+++.++|+||+++++.+...+..+++||
T Consensus         3 y~~~~~lg~g~~~~v~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCR--HKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             ceEEEEecccCCEEEEEEE--ECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4556778888888888876  455688999999976432  234567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++++.+..+.. ....+++.....++.|++.||+..++
T Consensus        81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~  118 (287)
T cd07848          81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHK  118 (287)
T ss_pred             cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999876655443 34468899999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.44  E-value=1.1e-12  Score=99.03  Aligned_cols=111  Identities=18%  Similarity=0.091  Sum_probs=90.1

Q ss_pred             hhhhhcccceeeecce-eeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|..... +...|+.+|+|.++.....  ....+..|+.+++.++|+||+++++.+..++..|++|||+++
T Consensus         3 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   82 (318)
T cd05582           3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRG   82 (318)
T ss_pred             eeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCC
Confidence            4677888888875411 2246889999999865432  234567899999999999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|.+++.+.. .+++.....++.||++||+..++
T Consensus        83 ~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~  116 (318)
T cd05582          83 GDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS  116 (318)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999997644 58899999999999999986554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.44  E-value=1.7e-12  Score=95.28  Aligned_cols=116  Identities=14%  Similarity=0.139  Sum_probs=95.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|.+.+.++.|+.|.+|.+.  ...++..+|+|.+.....   .....+.+|+.+++.+.|+|++++++.+..++..++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~--~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRAT--CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEe--ecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEE
Confidence            345667788889999988876  456788999998875332   234568899999999999999999999998899999


Q ss_pred             EEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||+++++|.+++..   ....+++.....++.||+.||+.++
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH  123 (267)
T cd08229          80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH  123 (267)
T ss_pred             EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   2345789999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.44  E-value=1e-12  Score=99.83  Aligned_cols=115  Identities=14%  Similarity=0.020  Sum_probs=94.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.+.+.++.|++|.++...  ....++.+|+|.+.....   .....+..|+.++..+.|+|++++++.+.+.+..++||
T Consensus         3 y~~~~~lG~G~fg~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVK--LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEE--ECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4556778999999998876  445678999999975432   22344778899999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++.+....+++.....++.|++.||..+++
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~  120 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ  120 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998755568898899999999999985543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.44  E-value=3e-12  Score=93.86  Aligned_cols=115  Identities=17%  Similarity=0.102  Sum_probs=97.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.+.++.|+.+.+|.+.  ...+++.+|+|.+..... .....+.+|+..++.+.|+|++++++.+...+..++++||
T Consensus         3 ~~~~~~ig~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVL--HRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             chHHHHhcCCCCeEEEEEE--EcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            4556778888888888875  445688999999976543 3355688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++......+++.....++.|+++||+..++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            99999999998754578889999999999999998776

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.44  E-value=1.3e-12  Score=96.90  Aligned_cols=108  Identities=16%  Similarity=0.042  Sum_probs=88.3

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|++|.+|.+.  ...+|+.+|+|.+......   ....+..|+.+++.++|+|++++.+.+...+..+++|||+++|+
T Consensus         2 g~G~~g~Vy~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           2 GKGGFGEVSACQ--MRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCceeEEEEE--EccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            567888888765  5567889999999764332   23456789999999999999999999988899999999999999


Q ss_pred             HHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |..++..   ....+++.....++.||+.||+..++
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~  115 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ  115 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9988753   23468899999999999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0663|consensus

Probab=99.43  E-value=3.8e-13  Score=98.82  Aligned_cols=118  Identities=18%  Similarity=0.125  Sum_probs=99.0

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC--C
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--P  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~  136 (184)
                      -.++.|...+.+.+|.+|.||.+.  +..+++.||+|.++....  ...-..++|+.++.+++|||||.+.......  +
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRak--dk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAK--DKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEec--cCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence            356677777889999999999987  778899999999987542  2233468999999999999999998876543  6


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+|+|||||+. +|..++.+-...+...+..-++.|+++|++.++
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH  194 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH  194 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh
Confidence            79999999997 899999887777888999999999999998654

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.43  E-value=1.5e-12  Score=95.23  Aligned_cols=113  Identities=19%  Similarity=0.165  Sum_probs=93.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+.+.++.|+.+.+|.+.+   ..+..+|+|.++..... ...+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~---~~~~~~~iK~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKW---RGKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HcchhhhhccCCCceEEEeEe---cCCccEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            456667788898888888652   23568999998754332 34678899999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++......+++.....++.|++.|++..+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  117 (256)
T cd05059          81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE  117 (256)
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999865556889999999999999998554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.43  E-value=1.4e-12  Score=96.69  Aligned_cols=114  Identities=14%  Similarity=0.102  Sum_probs=94.5

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .....++.|+.|.+|.+.  ...++..+++|.+..........+.+|+.+++.++|+|++++++.+...+..++++||++
T Consensus         8 ~i~~~lg~g~~g~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQ--NKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHhhcccCCCeEEEEEE--ECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            344567788888888765  445677889999876554445678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|++..++.+....+++..+..++.|+++||+.+++
T Consensus        86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~  121 (282)
T cd06643          86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE  121 (282)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887655568999999999999999986544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.43  E-value=1.3e-12  Score=100.76  Aligned_cols=119  Identities=14%  Similarity=0.050  Sum_probs=97.9

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....+.+...+.++.|++|.+|.+.  ...+++.+|+|.++....   .....+..|..+++.++||||+++++.+..++
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEE--ECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            3445677888889999999999876  556788999999975332   22345678999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|||+++|+|.+++...  .+++.....++.||+.||...++
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~  160 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHS  160 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999764  36788888899999999985543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.43  E-value=1.4e-12  Score=103.64  Aligned_cols=118  Identities=14%  Similarity=0.071  Sum_probs=95.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeec-CcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKE-GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ...|.+.+.++.|++|.+|.+.  .... +..||+|.+..........+.+|+.+++.++||||+++++.+...+..|+|
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~--~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv  143 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVAT--RGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI  143 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEE--EcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence            3346777888999999998875  2333 678899987654444345677899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++...   ...+++.....++.||+.||+..++
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~  187 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS  187 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999988642   3457888899999999999996544

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.43  E-value=1.8e-12  Score=94.93  Aligned_cols=109  Identities=18%  Similarity=0.177  Sum_probs=87.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      ++.|++|.+|.+.+.....+..||+|.++.... ...+.+.+|+.+++.++|+|++++++.+. .+..+++|||+++|+|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence            466778888876533333456799999976543 23456889999999999999999999875 4578999999999999


Q ss_pred             HHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         151 QDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       151 ~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++......+++..+..++.|+++||+..+
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  112 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLE  112 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999765557899999999999999998543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.43  E-value=1.8e-12  Score=94.91  Aligned_cols=115  Identities=21%  Similarity=0.143  Sum_probs=97.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..|.+.+.++.|+.+.+|.+..  . .+..+|+|.++.........+..|+.+++.++|+|++++++.+...+..+++||
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~--~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLW--K-NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEe--c-CCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            3466778889999999998762  2 278999999987665456678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++.+. ...+++.+...++.|++.|+..++
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  121 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE  121 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999864 345789999999999999998654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.42  E-value=2.2e-12  Score=93.98  Aligned_cols=114  Identities=12%  Similarity=0.069  Sum_probs=94.1

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+.++.|+.+.+|.+.  ...++..+++|.++....  .....+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           3 EILNKIGKGSFGVVFKVV--RKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             eEeEEecCCCCeEEEEEE--EcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            444667778888888876  445688999999875432  3356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++... ...+++.....++.|++.||...++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~  119 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS  119 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999764 4568889999999999999986543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0193|consensus

Probab=99.42  E-value=3.5e-13  Score=105.49  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=94.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+.+.+.++.|.+|.||.+.    +.| .||||.++....  +..+.|.+|+..+++-+|.||+-+.|+|..++. .||
T Consensus       392 ~ev~l~~rIGsGsFGtV~Rg~----whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi  465 (678)
T KOG0193|consen  392 EEVLLGERIGSGSFGTVYRGR----WHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII  465 (678)
T ss_pred             HHhhccceeccccccceeecc----ccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence            345566778888888888754    565 699999987654  446789999999999999999999999987766 999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +.+|+|-+|+.+|+-.+..++..+...|++|||+||.-++
T Consensus       466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH  505 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH  505 (678)
T ss_pred             ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh
Confidence            9999999999999876667889999999999999998544

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.42  E-value=1.8e-12  Score=95.45  Aligned_cols=113  Identities=21%  Similarity=0.292  Sum_probs=93.2

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch----------hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI----------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~----------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ...+.++.|+.+.+|.+.  ...+|..+|+|.++....          ...+.+..|+.+++.++|+|++++++.+..++
T Consensus         4 ~~~~~lg~g~~~~vy~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           4 VKGELIGKGTYGRVYLAL--NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             eecceecccCceEEEEEe--ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            345678889999999876  456788999999864211          11345778999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++||+++|+|.+++.+.. .+++..+..++.||+.||...++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~  126 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHS  126 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999998754 67888999999999999986654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=2.1e-12  Score=95.79  Aligned_cols=116  Identities=16%  Similarity=0.137  Sum_probs=96.6

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .+.+...+.++.|++|.+|...  ....|..+|+|.+..... .....+.+|+.++..++|+|++++++.+...+..+++
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVK--HIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEE--EcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence            3456677888999999998875  445688999999875432 3356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||+++|+|.+++.+.+ .+++.....++.|++.||...+
T Consensus        82 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH  120 (284)
T cd06620          82 MEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLY  120 (284)
T ss_pred             EecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987644 5789999999999999987654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=2.7e-12  Score=95.28  Aligned_cols=114  Identities=14%  Similarity=0.069  Sum_probs=94.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.+.++.|+.|.+|.+.  ....|..+|+|.++.... .....+.+|+.++..++|+|++++++.+...+..++++||
T Consensus         3 ~~~~~~ig~g~~g~v~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVL--HRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             hhhhhhhcccCCeEEEEEE--EcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            4556778889999988876  445688999999875422 2245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE--QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~--~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|..++...  ...+++.....++.|++.||..++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH  119 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK  119 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999988764  236789999999999999998665

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.42  E-value=2.2e-12  Score=96.41  Aligned_cols=114  Identities=15%  Similarity=0.197  Sum_probs=97.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..|.....++.++.+.+|.+.  +...|+.|++|.+..........+.+|+..++.++|+|++++++.+...+..++++|
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAI--DVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEE--EcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            446666778888888888876  556789999999976554445678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++.+.  .+++.++..++.|++.||+..+
T Consensus        97 ~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH  132 (296)
T cd06655          97 YLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH  132 (296)
T ss_pred             ecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999988754  4789999999999999998554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.42  E-value=1.8e-12  Score=94.72  Aligned_cols=114  Identities=15%  Similarity=0.089  Sum_probs=95.2

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.++++.+|.+.  ...++..+|+|.+.....   .....+.+|+..+++++|||++++++.+..++..++++
T Consensus         2 y~~~~~i~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQ--KRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             ceEEEEeccCCCceEEEEE--EccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence            3455677888888888875  445688999999986432   23457889999999999999999999999899999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+.+++|.+++... ..+++.....++.|+++||+.+++
T Consensus        80 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~  118 (258)
T cd05578          80 DLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHS  118 (258)
T ss_pred             eCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999765 368899999999999999986543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.42  E-value=2.8e-12  Score=95.01  Aligned_cols=114  Identities=18%  Similarity=0.169  Sum_probs=95.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |.+...++.|+.+.+|.+.  ....|..||+|.+.....  .....+.+|+.+++.++|+|++++++.+..++..++++|
T Consensus         2 y~~~~~l~~g~~~~v~~~~--~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAK--DRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             ceEEeecccCCCcEEEEEE--ECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence            3445667888888888876  445688999999976542  234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+ +++|.+++......+++.++..++.||++||+..++
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  117 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA  117 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99 999999997665678999999999999999986654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.41  E-value=2e-12  Score=95.22  Aligned_cols=111  Identities=19%  Similarity=0.260  Sum_probs=87.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      ++.|++|.+|.+...+...+..+|+|.++.... .....+.+|+.+++.++|+|++++++.+......+++|||+++|+|
T Consensus         3 lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   82 (269)
T cd05087           3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDL   82 (269)
T ss_pred             ccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcH
Confidence            577888888887533334456899999876542 2234688899999999999999999999888899999999999999


Q ss_pred             HHHHhhcC----CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         151 QDILENEQ----FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       151 ~~~l~~~~----~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++....    ...++.....++.|+++||+..++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (269)
T cd05087          83 KGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK  118 (269)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            99997532    235667788899999999986543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.41  E-value=2.6e-12  Score=96.12  Aligned_cols=117  Identities=17%  Similarity=0.114  Sum_probs=96.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ++.|...+.++.|+.|.+|.+.  ...++..||+|.++.... .....+.+|+.+++.++|+||+++++.+...+..+++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv   82 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGR--SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV   82 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEE--EcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence            4556666778889999999876  445788999999975432 2234577899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||++ +++.+++......+++.....++.|+++||+..++
T Consensus        83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~  122 (301)
T cd07873          83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR  122 (301)
T ss_pred             Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99998 58999887665568899999999999999986654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.41  E-value=2.8e-12  Score=94.03  Aligned_cols=116  Identities=14%  Similarity=0.141  Sum_probs=96.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|.+.+.++.|+.+.+|.+.  ...+|+.+|+|.++....   .....+.+|+.+++.++|+|++++++.+...+..++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAI--CLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCceEEEEEE--EcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            346677788899999999876  445788999999875332   224568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||+++|+|..++.+   ....+++.+...++.|+++||+.++
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  123 (267)
T cd08224          80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH  123 (267)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864   2345788999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.41  E-value=2e-12  Score=96.63  Aligned_cols=114  Identities=12%  Similarity=0.159  Sum_probs=95.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.....++.|+++.+|.+.  ...++..+++|.+..........+.+|+.+++.+.|+|++++.+.+..+...++|+|
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~--~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEE--ECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            345555678888888888875  456788999999987655445678899999999999999999999998899999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++.+.  .+++.+...++.|++.||+..+
T Consensus        98 ~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH  133 (296)
T cd06654          98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH  133 (296)
T ss_pred             ccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999998653  4788899999999999998554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.41  E-value=2.5e-12  Score=94.50  Aligned_cols=116  Identities=17%  Similarity=0.185  Sum_probs=95.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecC---cEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEG---NKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.++..+.++.|+.|.+|.+.  ....+   ..+|+|.++.... ...+.+..|+.++..++|+|++++.+.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~--~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGI--LKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             HHceEeeEecCCCCccEEEEE--EecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence            345666789999999998875  22233   3789999876432 33566889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||+++|+|.+++......+++.+...++.|++.|++..+
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH  124 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS  124 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876557899999999999999998554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.41  E-value=2.9e-12  Score=93.52  Aligned_cols=113  Identities=22%  Similarity=0.219  Sum_probs=95.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+.+.++.|+.|.+|.+.    ..|+.||+|.++.... ..+.+.+|+.+++.++|+|++++++.+...+..+++||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~----~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   80 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGD----YRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE   80 (256)
T ss_pred             hhccceeeeecCCCceEEEEE----ecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence            345666778888888888764    5689999999986644 35678899999999999999999999988899999999


Q ss_pred             ecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++++|.+++.... ..+++.....++.|++.|++..+
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh  119 (256)
T cd05039          81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE  119 (256)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999997643 35889999999999999998544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.41  E-value=2.9e-12  Score=93.38  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=95.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|...+.++.++.+.+|.+.  ....+..+++|.++....  .+.+.+|+..++.++|+|++++.+.+......|+++|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAI--HKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEE--EcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            345666778888888888875  334578999999976533  5678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |+++++|.+++......+++.....++.|+++||+..
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~l  115 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYL  115 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999987666789999999999999999844

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.41  E-value=2.3e-12  Score=96.39  Aligned_cols=114  Identities=13%  Similarity=0.161  Sum_probs=96.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..|...+.++.|+.+.+|.+.  ...+++.||+|.+........+.+.+|+.+++.++|+|++++++.+..++..++++|
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAI--DIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEE--ECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            456666778889888888876  556789999999986554445668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++++|.+++.+.  .+++.++..++.|++.||+..+
T Consensus        97 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH  132 (297)
T cd06656          97 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH  132 (297)
T ss_pred             ccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999998653  4788899999999999998554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.41  E-value=2.8e-12  Score=96.32  Aligned_cols=117  Identities=15%  Similarity=0.115  Sum_probs=96.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .+.|...+.++.|++|.+|.+.  ...++..||+|.++.... .....+.+|+.+++.++|+|++++++.+...+..+++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   82 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGR--SKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV   82 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEE--ecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence            3456666788999999999876  455788999999975433 2234577899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++ ++.+++......+++.....++.|++.||+..++
T Consensus        83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~  122 (309)
T cd07872          83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR  122 (309)
T ss_pred             EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999985 8888887665567888899999999999986554

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.41  E-value=2.7e-12  Score=93.99  Aligned_cols=115  Identities=18%  Similarity=0.153  Sum_probs=95.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+.+.++.|+.+.+|.+.   ...++.||+|.++..... .+.+.+|+.+++.++|+|++++++.+...+..++++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~---~~~~~~v~iK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGL---WNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             hheeeEEEecccCCccEEEEE---ecCCeEEEEEeeCCCccc-HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            446667888899999998865   234568999999765432 4568899999999999999999999998999999999


Q ss_pred             ecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++++|.+++.... ..+++.....++.|++.|++..++
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  121 (261)
T cd05068          82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA  121 (261)
T ss_pred             cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999997643 467899999999999999986543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.41  E-value=3.4e-12  Score=93.38  Aligned_cols=114  Identities=19%  Similarity=0.164  Sum_probs=97.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.+.++.++.+.++.+.  ...+++.+++|.+..... .....+.+|+..+..++|+|++++++.+...+..++++||
T Consensus         3 ~~~~~~i~~g~~~~v~~~~--~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVR--HKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             ceeeeeeeecCCeEEEEEE--EcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            4555778888888888876  445789999999987644 3356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++... ..+++.....++.|+++|++..++
T Consensus        81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~  117 (264)
T cd06623          81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHT  117 (264)
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999765 368899999999999999997775

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.41  E-value=3.6e-12  Score=92.91  Aligned_cols=112  Identities=18%  Similarity=0.212  Sum_probs=92.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ...+.++.++.+.+|.+.  ....+..|++|.+.....     ...+.+.+|+.+++.++|+|++++.+.+...+..+++
T Consensus         3 ~~~~~ig~g~~~~vy~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           3 RKGELLGSGSFGSVYEGL--NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             cccceeeecCCceEEEEE--EcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            344667888888888876  334688999999875432     2345688999999999999999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||+++++|.+++.+.. .+++.....++.|+++|++..+
T Consensus        81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH  119 (258)
T cd06632          81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH  119 (258)
T ss_pred             EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654 5788999999999999998554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.41  E-value=3.1e-12  Score=95.70  Aligned_cols=114  Identities=15%  Similarity=0.143  Sum_probs=94.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.....++.|++|.+|.+.  +...+..||+|.++.........+.+|+..+..+.|||++++++.+..++..++++|
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAR--EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEE--EcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            334444567888888888765  556788999999976544445668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++++|..++...  .+++.....++.|++.||+..+
T Consensus        99 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH  134 (297)
T cd06659          99 FLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLH  134 (297)
T ss_pred             cCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999987653  4789999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0589|consensus

Probab=99.41  E-value=1.4e-12  Score=99.93  Aligned_cols=117  Identities=12%  Similarity=0.179  Sum_probs=98.7

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc-EE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH-CC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~-~~  139 (184)
                      .+.+...+.++.|++|+.++..  +...+..+++|.+...+.  ...+...+|+.+++++.||||+.+.+.+...+. ++
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvr--hk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~   80 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVR--HKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC   80 (426)
T ss_pred             cchhhhhhhcCccccchhhhhh--hccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence            4556677889999999988876  556778999999987654  234467899999999999999999999998887 99


Q ss_pred             EEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+|+||+||++.+.+...+ ..+++..+..++.|++.|+.-.+
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH  123 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH  123 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998654 67899999999999999987443

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.41  E-value=2.8e-12  Score=93.87  Aligned_cols=116  Identities=22%  Similarity=0.209  Sum_probs=95.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.+.++.|+.|.+|.+.   ...+..||+|.+...... .+.+..|+.+++.++|+|++++++.+...+..++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~---~~~~~~v~iK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGY---YNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEE---ecCCceEEEEEccCCchh-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            4556777888999999999875   235678999998764432 467889999999999999999999999889999999


Q ss_pred             eecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++... ...+++..+..++.|+++||+.+++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~  121 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER  121 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999754 3457888899999999999986543

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.40  E-value=2e-12  Score=97.87  Aligned_cols=111  Identities=20%  Similarity=0.186  Sum_probs=88.5

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHH---HcCCCcchhhhheeeecCCcEEEE
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRL---KDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l---~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +...++.|+.|.+|.+.  ...+|+.||+|.++....   ...+.+..|..++   +.++||||+++++++...+..|+|
T Consensus         3 i~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           3 CLAVLGRGHFGKVLLAE--YKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             EEEEEeecCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            44667888899998876  455788999999986532   2234455665554   567899999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|..++...  .+++.....++.|++.||+..++
T Consensus        81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~  119 (324)
T cd05589          81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHE  119 (324)
T ss_pred             EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999888653  58899999999999999986543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.40  E-value=2.7e-12  Score=96.92  Aligned_cols=109  Identities=16%  Similarity=0.090  Sum_probs=89.1

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...++..||+|.++....   .....+..|..++..+ .|||++++++.+...+..+++|||++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           2 VLGKGSFGKVLLAE--LKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            46778888888875  445678999999986532   2234567788888877 69999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.+.. .+++.+...++.|++.||+.+++
T Consensus        80 ~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~  114 (318)
T cd05570          80 GGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHE  114 (318)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999987654 58899999999999999986543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.40  E-value=2.8e-12  Score=95.72  Aligned_cols=109  Identities=16%  Similarity=0.177  Sum_probs=92.1

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      ..++.|+++.+|.+.  ...++..||+|.++.........+.+|+..++.++|+|++++++.+..++..++++||+++++
T Consensus        28 ~~lg~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~  105 (292)
T cd06658          28 IKIGEGSTGIVCIAT--EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA  105 (292)
T ss_pred             hcccCCCCeEEEEEE--ECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence            557788888888765  456788999999876554445668899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++...  .+++.+...++.||+.||+..++
T Consensus       106 L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~  136 (292)
T cd06658         106 LTDIVTHT--RMNEEQIATVCLSVLRALSYLHN  136 (292)
T ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99988643  47889999999999999986654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.40  E-value=2.7e-12  Score=97.01  Aligned_cols=109  Identities=17%  Similarity=0.139  Sum_probs=88.9

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+++.||+|.++....   .....+..|..++..+ .|||++++++++...+..|++|||++
T Consensus         2 ~lg~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           2 VLGKGSFGKVMLAR--LKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             eeeeCCCeEEEEEE--EcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence            36778888888876  556788999999986432   2234566788888766 69999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|.+++.... .+++.....++.|++.||+..++
T Consensus        80 ~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~  114 (320)
T cd05590          80 GGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHD  114 (320)
T ss_pred             CchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654 57899999999999999985543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=3.6e-12  Score=93.32  Aligned_cols=114  Identities=20%  Similarity=0.234  Sum_probs=94.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+...+.++.|+.+.+|.+.  ...++..+|+|.+.....     .....+.+|+.+++.++|+|++++++.+...+..+
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~--~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCY--DVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             cccccceecCCCceEEEEEE--EcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence            35566788889999988876  456788999999875422     12346788999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++||+++++|.+++.... .+++.....++.|++.||+..+
T Consensus        81 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH  121 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH  121 (263)
T ss_pred             EEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997654 5788888999999999998543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.40  E-value=2.7e-12  Score=95.43  Aligned_cols=114  Identities=15%  Similarity=0.006  Sum_probs=93.4

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ...+.++.|++|.+|.+.  ...+++.+|+|.+......   ....+.+|+.+++.++|++++.+.+.+.+.+..+++||
T Consensus         3 ~~~~~ig~G~~g~v~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           3 RQYRVLGKGGFGEVCACQ--VRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             eeeEEeecCCCeEEEEEE--EcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            344668889999998876  5557889999998764332   12346789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++... ...+++.+...++.|++.||+..++
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~  120 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ  120 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988643 3358899999999999999986654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.40  E-value=2.5e-12  Score=97.34  Aligned_cols=112  Identities=21%  Similarity=0.099  Sum_probs=89.9

Q ss_pred             hhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          70 SLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.++.|++|.+|..... +...++.||+|.++....    .....+..|+.+++.++||||+++++.+...+..|++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            35677888888876421 234678999999986432    2234567899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++.+.+ .+.+.....++.|++.||+..++
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~  118 (323)
T cd05584          82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQ  118 (323)
T ss_pred             CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999997654 56788888899999999986543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.40  E-value=4.2e-12  Score=92.32  Aligned_cols=109  Identities=24%  Similarity=0.268  Sum_probs=90.3

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      .++.|+.+.+|.+.   ...+..+|+|.++.... .....+.+|+.++..++|+|++++++.+...+..+++|||+++|+
T Consensus         2 ~ig~g~~g~vy~~~---~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           2 LLGKGNFGEVFKGT---LKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             ccCCCCCceEEEEE---ecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            46778888888764   33577899999876532 224468899999999999999999999999899999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++......+++.....++.|++.||...++
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  111 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLES  111 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999997655567899999999999999985543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.40  E-value=2.6e-12  Score=96.29  Aligned_cols=121  Identities=22%  Similarity=0.172  Sum_probs=96.7

Q ss_pred             Cccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ..+.+.+.+.++.|+.|.+|.+...   ....+..+|+|.++.... ...+.+.+|+.+++.+ +|+|++++++.+...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            4455677788899999988876421   122355899999876432 3345688999999999 7999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++||+++|+|.+++.... ..+++.+...++.|++.||+..++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  159 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS  159 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997543 347999999999999999986654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.40  E-value=3.3e-12  Score=93.25  Aligned_cols=108  Identities=20%  Similarity=0.235  Sum_probs=86.7

Q ss_pred             hhhhhcccceeeecceeeecC----------cEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          71 LMHDIVKFNGYLKTKELLKEG----------NKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g----------~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .++.|+++.+|.+...  ..+          ..+++|.++..... ...+.+|+.+++.++|+|++++++.+.. +..++
T Consensus         2 ~lg~G~~~~v~~~~~~--~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l   77 (259)
T cd05037           2 HLGQGTFTNIYKGVLR--VQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM   77 (259)
T ss_pred             cccccccceEEEEEEe--ccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence            4567788888876522  222          35788887755433 5678899999999999999999999887 77899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|.+++......+++..+..++.||+.||+.+++
T Consensus        78 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~  119 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED  119 (259)
T ss_pred             EEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999998765568899999999999999986543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.40  E-value=3.4e-12  Score=94.35  Aligned_cols=119  Identities=18%  Similarity=0.214  Sum_probs=96.4

Q ss_pred             cccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+.+.++.|+.+.+|.+....   ...+..||+|.++..... ..+.+.+|+.++..+.|+|++++++.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            446667888999999999875221   134578999999865443 4567899999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ-------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~-------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++...+             ..+++.+...++.|++.|++.+++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~  140 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS  140 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999997532             346788899999999999986553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.40  E-value=3.4e-12  Score=94.85  Aligned_cols=113  Identities=16%  Similarity=0.013  Sum_probs=93.3

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ....++.|++|.+|.+.  ...+++.+|+|.++.....   ....+.+|+.+++.++|+|++.+.+.+...+..++++||
T Consensus         4 ~~~~lg~G~~g~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           4 QYRVLGKGGFGEVCACQ--VRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             EEEEEecCCCeEEEEEE--ECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            34668889999988876  5567889999999765432   234467899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++... ...+++.....++.|++.||..+++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~  120 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR  120 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999888653 3468999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0586|consensus

Probab=99.40  E-value=2e-12  Score=101.34  Aligned_cols=116  Identities=18%  Similarity=0.172  Sum_probs=97.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ....+.+...++.|.++.|.++.  ...++..||+|.+++...  ...+.+.+|+++|..++||||+++++....+..+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~--~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLAR--HILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeE--ecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            44556777788888888888876  777899999999987654  33456889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +||||+.+|.+++++.+++ .+.+.....+..|+..+++-.
T Consensus       132 lV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYc  171 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYC  171 (596)
T ss_pred             EEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHH
Confidence            9999999999999999876 455577777889999988743

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=3.4e-12  Score=94.71  Aligned_cols=116  Identities=21%  Similarity=0.200  Sum_probs=93.6

Q ss_pred             cccchhhhhhcccceeeecce--eeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCL  140 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~l  140 (184)
                      +.....++.|+.|.+|.+.+.  +...+..||+|.++... ......+.+|+.+++.+.|+|++++.+.+...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            445566888999988876421  34567899999997653 23345788999999999999999999988764  67899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++.+....+++..+..++.|++.||+..+
T Consensus        86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH  126 (284)
T cd05079          86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG  126 (284)
T ss_pred             EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999765556899999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.40  E-value=3.1e-12  Score=97.04  Aligned_cols=109  Identities=16%  Similarity=0.097  Sum_probs=89.0

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+++.+|+|.++....   .....+..|..++..+ +||||+++++++...+..+++|||++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           2 VIGRGSYAKVLLVR--LKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            46778888888876  456788999999986532   2234567788888766 79999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.... .+++.....++.|++.||+.+++
T Consensus        80 ~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~  114 (329)
T cd05618          80 GGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE  114 (329)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887654 58899999999999999985543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.40  E-value=4.2e-12  Score=92.64  Aligned_cols=114  Identities=13%  Similarity=0.092  Sum_probs=93.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.+.++.|++|.++...  ...++..+|+|.++... ....+.+..|+.+++.++|+|++++.+.+.+.+..++++||
T Consensus         2 y~~~~~lg~g~~g~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQ--HVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             ceEEEEeeccCCeEEEEEE--EcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            3445678888888888876  55678899999986432 23355678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|++.+++... ...+++.....++.|++.||...+
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  117 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH  117 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999988753 345788889999999999998544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.40  E-value=3.3e-12  Score=94.37  Aligned_cols=113  Identities=17%  Similarity=0.142  Sum_probs=92.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      |...+.++.|+.+.+|.+.  ....+..||+|.++.... .....+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus         6 y~~~~~l~~g~~~~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGI--DNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEE--EcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            4445667888888888875  445678999999875432 3345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++...  .+++.....++.|+++|++..++
T Consensus        84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~  119 (277)
T cd06642          84 LGGGSALDLLKPG--PLEETYIATILREILKGLDYLHS  119 (277)
T ss_pred             cCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999988653  47888899999999999986553

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG2052|consensus

Probab=99.40  E-value=1.4e-12  Score=98.94  Aligned_cols=107  Identities=20%  Similarity=0.161  Sum_probs=86.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc--CCCcchhhhheeeecC----CcEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD--LHHDHLVKFIGACLDP----PHCC  139 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~ni~~l~~~~~~~----~~~~  139 (184)
                      ..+.+.++.|.+|.|+.    |.|+|..||||++....   ..++.+|.++.+.  ++|+||+.+++.=...    ..+|
T Consensus       213 I~L~e~IGkGRyGEVwr----G~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWR----GRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             eEEEEEecCccccceee----ccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            45566677777666655    67999999999998754   4567788888776  5999999998864332    3689


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|++|-+.|||+++|...  .++....+++++.+|.|||-++
T Consensus       286 LvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH  325 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLH  325 (513)
T ss_pred             EeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHH
Confidence            999999999999999873  5888999999999999999654

>KOG3653|consensus

Probab=99.40  E-value=2.3e-12  Score=98.43  Aligned_cols=112  Identities=21%  Similarity=0.196  Sum_probs=93.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc--CCCcchhhhheeeecCC---
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD--LHHDHLVKFIGACLDPP---  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~ni~~l~~~~~~~~---  136 (184)
                      .++...+.++++.|.+|.||++.    ..++.||||.+....   .+.|.+|-.+...  +.|+||+++++.-...+   
T Consensus       208 ~l~pl~l~eli~~Grfg~V~Kaq----L~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQ----LDNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR  280 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhh----ccCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence            35566777889999988888764    778999999998754   5567777777664  58999999998765544   


Q ss_pred             -cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 -HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 -~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ..++|++|-+.|+|.++|+.+-  .+|....+++..+++|||.+|.
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHe  325 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHE  325 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcc
Confidence             7899999999999999998754  7999999999999999998764

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.40  E-value=3.4e-12  Score=94.40  Aligned_cols=117  Identities=21%  Similarity=0.185  Sum_probs=94.8

Q ss_pred             ccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~  139 (184)
                      .+.+.+.++.|+.+.+|.+.+.  +...+..+|+|.++..... ....+..|+..++.+.|+|++++.+++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            3455567888888888887532  1234779999999865443 45678999999999999999999998876  56789


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++||+++|+|.+++......+++.....++.|++.||+..+
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH  126 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG  126 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876556899999999999999998554

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.39  E-value=3.4e-12  Score=96.47  Aligned_cols=109  Identities=17%  Similarity=0.100  Sum_probs=88.6

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ....++.||+|.++....   .....+..|..++..+ +||||+++++.+...+..|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           2 VLGKGSFGKVMLAE--LKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             ccccCCCeEEEEEE--ECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence            46778888898876  445678999999986532   2234566788888765 79999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.... .+++.....++.|+++||+..++
T Consensus        80 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~  114 (321)
T cd05591          80 GGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHR  114 (321)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654 57888889999999999986553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.39  E-value=3e-12  Score=96.52  Aligned_cols=118  Identities=18%  Similarity=0.160  Sum_probs=94.1

Q ss_pred             cccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..|.....++.|++|.+|++.+.  +......||+|.++.... ...+.+..|+.+++.++|+||++++|.+... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            34566688999999999987632  112233589999975432 3356788999999999999999999988764 5689


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|++.+++......+++.....++.||+.||+.+++
T Consensus        86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~  127 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE  127 (316)
T ss_pred             eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998766668899999999999999996654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=4.6e-12  Score=93.46  Aligned_cols=113  Identities=18%  Similarity=0.192  Sum_probs=94.4

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      |.....++.++.+.+|.+.  ...++..+|+|.++... ......+.+|+.+++.++|+|++++.+.+......++++||
T Consensus         3 y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAI--DKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEE--ECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            4455667888888888876  45578899999997653 23345678999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++...  .+++.....++.|++.||+..++
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~  116 (274)
T cd06609          81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHE  116 (274)
T ss_pred             eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999764  57899999999999999986554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.39  E-value=3.5e-12  Score=95.67  Aligned_cols=113  Identities=15%  Similarity=0.186  Sum_probs=93.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |...+.++.|+.+.+|++.  ....++.|++|.++....   .....+.+|+.+++.++|+|++++++.+..++..+++|
T Consensus         3 y~~~~~l~~g~~~~v~~~~--~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           3 FETIKLISNGAYGAVYLVR--HKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             ceEeeEeecCCCeeEEEEE--ECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4455677888888888876  556788999999986543   22456778999999999999999999999889999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++...+ .+++.....++.|++.||+..+
T Consensus        81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH  118 (305)
T cd05609          81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH  118 (305)
T ss_pred             ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 5788888899999999998554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.39  E-value=3.9e-12  Score=94.05  Aligned_cols=112  Identities=15%  Similarity=0.110  Sum_probs=93.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ++....++.++.+.+|.+.  ...++..+|+|.++.... .....+.+|+.+++.+.|+|++++++.+.+.+..++++||
T Consensus         6 y~~~~~lg~g~~~~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             hhhhhhcccCCCeEEEEEE--EccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            4445668888888888876  445788999999875432 3356688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|+|.+++...  .+++.+...++.|++.||+..+
T Consensus        84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh  118 (277)
T cd06640          84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH  118 (277)
T ss_pred             CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999998753  4788888999999999998554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.39  E-value=3.3e-12  Score=95.35  Aligned_cols=115  Identities=14%  Similarity=0.173  Sum_probs=94.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+...+.++.|+++.+|.+.  ...++..+|+|.++.......+.+..|+.+++.++|||++++++.+...+..|+++|
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAI--DVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEE--EcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            345555667888888888765  445678999999875544445668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++.+.  .+++..+..++.|++.||+..++
T Consensus        97 ~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~  133 (293)
T cd06647          97 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS  133 (293)
T ss_pred             cCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999764  36788889999999999985543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.39  E-value=5.4e-12  Score=93.33  Aligned_cols=118  Identities=19%  Similarity=0.191  Sum_probs=94.4

Q ss_pred             cccccchhhhhhcccceeeecceeee--cCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLK--EGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+...+.++.|++|.+|.+......  ....+|+|.++.... .....+.+|+..+..+.|+|++++++.+.. +..++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            34556678889999999887622111  123689998876543 334668899999999999999999999887 78899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|.+++.+....+++.....++.|++.||+.+++
T Consensus        86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~  127 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE  127 (279)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998766668999999999999999996654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.39  E-value=3.7e-12  Score=96.22  Aligned_cols=109  Identities=18%  Similarity=0.098  Sum_probs=86.7

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHH-HHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELK-RLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~-~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|++.  ....|..+|+|.+.....   .....+..|.. +++.++|+||+++++.+.+.+..|++|||++
T Consensus         2 ~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           2 VIGKGSFGKVLLAK--RKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             eeeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            46778888899876  556788999999976432   12334555554 5788999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|...+.... .+++.....++.||++||+..++
T Consensus        80 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~  114 (321)
T cd05603          80 GGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHS  114 (321)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887644 57788888899999999986543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0574|consensus

Probab=99.39  E-value=9e-13  Score=96.00  Aligned_cols=112  Identities=14%  Similarity=0.165  Sum_probs=98.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|++.+.+++|.+|+|+++.  +..+|..+|+|.+....  ..++...|+.+|++++.+.+|+++|.+.....+|+||||
T Consensus        34 VFDi~~KLGEGSYGSV~KAI--H~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAI--HRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHH--HhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            35666778899999999987  66789999999987653  357788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |.-|++.+.++-.+..+.+..+..++++.++||.-+
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YL  145 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYL  145 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHH
Confidence            999999999998777899999999999999998743

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.39  E-value=5.3e-12  Score=91.99  Aligned_cols=114  Identities=16%  Similarity=0.105  Sum_probs=94.4

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |...+.++.|+.+.+|.+.  +..++..+|+|.+.....  .....+..|+.+++.++|+|++++++.+...+..++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCR--RKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             ceEEEEecccCceEEEEEE--EcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            3445677888888888876  455788999999976533  235568899999999999999999999888899999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++++|.+++... ...+++.....++.|+++||+.++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  118 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH  118 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999764 345789999999999999998554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.39  E-value=4.6e-12  Score=93.92  Aligned_cols=121  Identities=19%  Similarity=0.146  Sum_probs=96.1

Q ss_pred             Cccccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +++.+.+.+.++.|+++.+|.+...  +...+..+++|.++.... .....+.+|+.+++.++|+|++++++.+...+..
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   82 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV   82 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence            3456677788899999999986521  223567899999975432 3345688999999999999999999999988999


Q ss_pred             EEEEeecCCCCHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENE----------------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~----------------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|||+++|+|.+++...                ...+++.+...++.|++.||+..++
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  142 (283)
T cd05090          83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS  142 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998532                1246788899999999999986654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.39  E-value=3.9e-12  Score=94.61  Aligned_cols=117  Identities=17%  Similarity=0.095  Sum_probs=95.6

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ++.|...+.++.|+.+.+|.+.  ...+++.||+|.++.... .....+.+|+.+++.++|+|++++++.+...+..++|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGR--SKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEE--EcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            3456666778889888888876  445688999999975432 2234567899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||+.+ +|.+++.+....+++.....++.|+++||+..++
T Consensus        82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~  121 (291)
T cd07844          82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ  121 (291)
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999985 9999887765578899999999999999986553

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.39  E-value=4.4e-12  Score=96.73  Aligned_cols=95  Identities=23%  Similarity=0.272  Sum_probs=75.5

Q ss_pred             Cccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeec-C
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLD-P  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~-~  135 (184)
                      ..+.|.+.+.++.|++|.+|.+.+.   ....++.||+|.++.... .....+.+|+.++..+ +|+|++++++.+.. .
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            4456778889999999999987632   234678999999976432 2345678999999999 68999999998765 4


Q ss_pred             CcEEEEEeecCCCCHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN  156 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~  156 (184)
                      ...+++|||+++|+|.+++..
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHh
Confidence            568899999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.39  E-value=3.8e-12  Score=96.04  Aligned_cols=109  Identities=17%  Similarity=0.101  Sum_probs=87.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...++..||+|.++....   ........|..++.. ++||||+++++.+.+.+..+++|||++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           2 MLGKGSFGKVFLAE--LKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             eeeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            36778888888876  445678999999986532   223445667777775 589999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|.+++.... .+++.+...++.|++.||+.+++
T Consensus        80 ~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~  114 (316)
T cd05619          80 GGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHS  114 (316)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999997643 57888899999999999986554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.38  E-value=4e-12  Score=95.93  Aligned_cols=109  Identities=17%  Similarity=0.115  Sum_probs=86.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.||.+.  ...+++.||+|.++....   ........|..++.. ..||||+++++.+...+..+++|||++
T Consensus         2 ~lG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           2 VLGKGSFGKVMLAE--LKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            36778888999876  445678999999986532   223345566666654 489999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.... .+++.....++.|++.||+.+++
T Consensus        80 gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~  114 (316)
T cd05592          80 GGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHK  114 (316)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654 57888899999999999986554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.38  E-value=4.4e-12  Score=96.02  Aligned_cols=109  Identities=16%  Similarity=0.088  Sum_probs=87.1

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHH-HHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELK-RLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~-~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+|+.+|+|.++....   .....+..|.. +++.++||||+++++.+...+..|++|||++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           2 VIGKGSFGKVLLAK--RKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             ceeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence            46778888888876  556789999999976432   22334455554 4677999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.... .+++.....++.||+.||+..++
T Consensus        80 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~  114 (325)
T cd05604          80 GGELFFHLQRER-SFPEPRARFYAAEIASALGYLHS  114 (325)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887644 67899999999999999985543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.38  E-value=4.7e-12  Score=93.65  Aligned_cols=119  Identities=16%  Similarity=0.083  Sum_probs=95.2

Q ss_pred             cccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+.+.+.++.|+.+.+|.+.....   ..+..||+|.++.... .....+..|+.+++.++|+|++++++.+.+.+..+
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            4466667889999999998762211   1567899998875432 23456889999999999999999999988888899


Q ss_pred             EEEeecCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++....      ..+++.+...++.||+.||+.+++
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  134 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE  134 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997543      257889999999999999986543

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.38  E-value=4.6e-12  Score=93.02  Aligned_cols=112  Identities=23%  Similarity=0.371  Sum_probs=91.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---------hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      .+...++.|+.+.+|.+.  ....+..+|+|.+......         ..+.+.+|+.+++.++|+|++++++.+...+.
T Consensus         3 ~~~~~ig~g~~~~v~~a~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           3 IKGALIGSGSFGSVYLGM--NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             cccceeecCCCeEEEEEE--ecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            344667888888888876  4456789999988653221         12457789999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+++++|.+++...+ .+++.....++.|++.||+.++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH  123 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH  123 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997654 5788889999999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.38  E-value=4.6e-12  Score=92.45  Aligned_cols=115  Identities=12%  Similarity=0.149  Sum_probs=94.2

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |+..+.++.|+.|.++...  ....|+.+|+|.+.....  ....++.+|+..++.++|+|++++.+.+...+..++++|
T Consensus         2 y~~~~~lg~g~~g~~~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVK--SKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             ceEEEEeccCCceEEEEEE--EcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            3455678888888888765  455788999999975432  234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++++|.+++... ...+++.+...++.|++.||+..++
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  119 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD  119 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999998754 3357889999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.38  E-value=2.1e-12  Score=110.56  Aligned_cols=103  Identities=20%  Similarity=0.258  Sum_probs=87.0

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      ...++.|++|.+|.+.  ....+..||+|.++.....    ...|+..+++++||||++++|+|.+.+..++||||+++|
T Consensus       695 ~~~ig~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        695 ENVISRGKKGASYKGK--SIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             ccEEccCCCeeEEEEE--ECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            3567888888888875  4467889999998754321    234578899999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.++++.    ++|..+..++.|||+||+..|
T Consensus       769 ~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH  797 (968)
T PLN00113        769 NLSEVLRN----LSWERRRKIAIGIAKALRFLH  797 (968)
T ss_pred             cHHHHHhc----CCHHHHHHHHHHHHHHHHHhc
Confidence            99999963    789999999999999999877

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.38  E-value=4.1e-12  Score=94.14  Aligned_cols=114  Identities=20%  Similarity=0.181  Sum_probs=92.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |+....++.++.+.+|.+.  ...+|+.||+|.+.....  ...+.+.+|+.+++.+.|+|++++++.+...+..++++|
T Consensus         3 y~~~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCR--NRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             eeeeeeecccCCeEEEEEE--ECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            4555667888888888876  445688999999875432  223557899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++++.+..++.... .+++..+..++.|++.||+.+++
T Consensus        81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~  118 (286)
T cd07847          81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHK  118 (286)
T ss_pred             ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999988887765433 58899999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.38  E-value=3.7e-12  Score=106.97  Aligned_cols=121  Identities=14%  Similarity=0.178  Sum_probs=99.7

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec--C
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD--P  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~  135 (184)
                      ...++.|.+...++.|++|.||++.  ....+..+|+|.++....  .....+..|+.++..+.||||+++++.+..  .
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAk--dk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVK--HKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEE--ECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            3455678888889999999999876  556778999999975433  234568899999999999999999998754  4


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+|+||||+++|+|.++|...   ...+++..+..|+.||+.||+.+++
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs  136 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN  136 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            5689999999999999999752   2468999999999999999998775

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.38  E-value=5.5e-12  Score=92.19  Aligned_cols=106  Identities=21%  Similarity=0.209  Sum_probs=88.2

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|+.+.+|.+.  ...+|+.+++|.++....   .....+.+|+.++..++|+|++++++.+...+..|+++||+++++
T Consensus         2 g~g~~~~vy~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           2 SKGAYGRVFLAK--KKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCceEEEEEE--ECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence            456677777765  334588999999976543   335567889999999999999999999998899999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+++.+.+ .+++..+..++.|+++||+..+
T Consensus        80 L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH  110 (265)
T cd05579          80 LASLLENVG-SLDEDVARIYIAEIVLALEYLH  110 (265)
T ss_pred             HHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999998755 6889999999999999998554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.38  E-value=3.6e-12  Score=105.00  Aligned_cols=117  Identities=14%  Similarity=0.114  Sum_probs=97.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ++.|.+...++.|+++.+|.+.  ....++.||+|.++....   .....+..|+.++..++|+||+++++.+...+..|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~--~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGR--KKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEE--ECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE
Confidence            4566777888999999999876  445688999999976432   22456788999999999999999999998889999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||||+.+|+|.+++...+ .+++.....++.||+.||+.+++
T Consensus        81 lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~  122 (669)
T cd05610          81 LVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHR  122 (669)
T ss_pred             EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999997644 57888899999999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1025|consensus

Probab=99.38  E-value=5.3e-13  Score=107.98  Aligned_cols=110  Identities=21%  Similarity=0.156  Sum_probs=92.7

Q ss_pred             cchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          68 KNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ....++.|++|.+|.+.|=  +..-.-+||+|++..... ....+++.|.-.|.+++|||+++++|.|.... +.||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            3456888999999988741  222234899999976544 44678999999999999999999999998655 8899999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      ++.|+|.++++.++..+..+..+.++.|||+||.
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~  812 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMK  812 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence            9999999999988888899999999999999997

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.38  E-value=6.3e-12  Score=93.07  Aligned_cols=120  Identities=20%  Similarity=0.196  Sum_probs=95.4

Q ss_pred             Cccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      .++.+.+.+.++.|+.|.+|.+...+   ......+|+|.++.... .....+.+|+..+..++|+|++++++.+...+.
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP   82 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence            34556777889999999999875221   12336799999975433 334568899999999999999999999998889


Q ss_pred             EEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+++|+|.+++....               ..+++.....++.|+++||+..+
T Consensus        83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH  141 (283)
T cd05048          83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS  141 (283)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997531               34778889999999999998554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.38  E-value=3.6e-12  Score=97.54  Aligned_cols=114  Identities=16%  Similarity=0.122  Sum_probs=92.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .++.+...+.++.|++|.+|.+.  ...+|+.||+|.+..... .....+.+|+.+++.++|+||+++++.+...+..++
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  149 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVI--HRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV  149 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEE--ECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence            34556667789999999999876  445688999999975432 334568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|....     ..++.....++.||+.||+.+++
T Consensus       150 v~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~  186 (353)
T PLN00034        150 LLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHR  186 (353)
T ss_pred             EEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999986532     34677788899999999986543

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.38  E-value=3.9e-12  Score=96.24  Aligned_cols=114  Identities=16%  Similarity=0.027  Sum_probs=91.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCc-chhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHD-HLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~-ni~~l~~~~~~~~~~~lv  141 (184)
                      |.+.+.++.|++|.+|++.  ...+++.||+|.++....   .....+..|..++..+.|+ +++.+++++...+..|++
T Consensus         2 y~~~~~lg~G~~g~Vy~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAE--RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   79 (324)
T ss_pred             ceEEEEEeeccCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence            3455778889999999876  445678999999986432   2345577888899988765 577888888888999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++.... .+++.....++.||+.||+..++
T Consensus        80 ~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~  119 (324)
T cd05587          80 MEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHS  119 (324)
T ss_pred             EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654 57889999999999999985543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.38  E-value=5.5e-12  Score=92.10  Aligned_cols=111  Identities=21%  Similarity=0.133  Sum_probs=90.3

Q ss_pred             hhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .++.|+.+.+|.+.+.. ......+|+|.++.... ...+.+.+|+.+++.++|+|++++++.+.. ...++++||+++|
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~   80 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG   80 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence            35678888888876322 11223699999987765 556678999999999999999999999887 8899999999999


Q ss_pred             CHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         149 SLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       149 sl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|.+++.+.. ..+++.....++.|+++||+..++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~  115 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES  115 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh
Confidence            9999998754 467899999999999999986554

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.38  E-value=4.2e-12  Score=95.18  Aligned_cols=119  Identities=23%  Similarity=0.245  Sum_probs=94.2

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCc--EEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGN--KVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.+.+.+.++.|++|.+|.+.  ...++.  .+|+|.++.... .....+.+|+.++..+ +|+|++++++.+...+.
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~a~--~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~   82 (303)
T cd05088           5 EWNDIKFQDVIGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   82 (303)
T ss_pred             chhhceeeeeecCCCCceEEEEE--EccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence            44566777889999999999876  223444  457777764322 2345678899999999 89999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .|+++||+++|+|.+++....               ..+++.+...++.|++.|++..++
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~  142 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ  142 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999997432               257888999999999999986554

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1187|consensus

Probab=99.38  E-value=5e-14  Score=107.67  Aligned_cols=133  Identities=25%  Similarity=0.309  Sum_probs=97.1

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCC-ceeEEeeecCCCchhhhhhhccc-Cccccccchhhhhhcccceeeecceee
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMHDIVKFNGYLKTKELL   88 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~-~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (184)
                      |.+ |++++.+++|+|+|+++|||.+.+ +.++|+||+++|+|++.|+.... .++|-....+....+.|..|+|.    
T Consensus       118 F~~-Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~----  192 (361)
T KOG1187|consen  118 FLN-EVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHE----  192 (361)
T ss_pred             HHH-HHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHcc----
Confidence            666 999999999999999999999988 49999999999999999998765 77888888888888888888875    


Q ss_pred             ecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Ccc-hhhhheeee-cCCcEEEEEeecCCCCH
Q psy8884          89 KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDH-LVKFIGACL-DPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        89 ~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~n-i~~l~~~~~-~~~~~~lv~e~~~~gsl  150 (184)
                      ....++.++.++++++...++|..++....... .|. ....  ... .+..-|+.+||...|.+
T Consensus       193 ~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~--~~~~~gt~gY~~PEy~~~g~l  255 (361)
T KOG1187|consen  193 GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV--STTVMGTFGYLAPEYASTGKL  255 (361)
T ss_pred             CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccce--eeecCCCCccCChhhhccCCc
Confidence            233478999999998866666666554433221 111 0000  000 33444777777765543

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.38  E-value=6.5e-12  Score=91.66  Aligned_cols=114  Identities=19%  Similarity=0.210  Sum_probs=94.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.+.+.++.|+.|.+|.+.+   ..+..+|+|.++..... ...+..|+..++.+.|+|++++++.+......++++|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~---~~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYW---LEKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEE---eCCCeEEEEECCCCCCC-HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            3456667788899999888652   24678999998754332 4568899999999999999999999988889999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++......+++.....++.|++.|++.++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  117 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE  117 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876556788999999999999998544

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.38  E-value=5.6e-12  Score=93.34  Aligned_cols=108  Identities=19%  Similarity=0.094  Sum_probs=87.3

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|++|.+|...  ....|+.+|+|.+......   .......|+.+++.++|||++++.+.+...+..+++|||+++|+
T Consensus         2 g~G~~g~Vy~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           2 GKGGFGEVCAVQ--VKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCceEEEEEE--EccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            567888888765  4456899999999754321   13345679999999999999999999999999999999999999


Q ss_pred             HHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++... ...+++.....++.|++.||+..++
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  113 (277)
T cd05607          80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHS  113 (277)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99888643 3457888899999999999986553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.38  E-value=3.9e-12  Score=106.24  Aligned_cols=116  Identities=19%  Similarity=0.076  Sum_probs=94.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|...+.++.|++|.+|.+.  ...+|+.||+|.++....   .....+.+|+.+++.++|||++++++.+.+++..+++
T Consensus         3 rYeIi~~LGkGgfG~VYlA~--d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAY--DPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEE--ECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            45666788999999999876  556789999999975422   2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhc----------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENE----------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~----------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++...          ...+++.....++.||++||+..++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs  131 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS  131 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998642          1234566788999999999985543

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.38  E-value=4.7e-12  Score=95.80  Aligned_cols=108  Identities=18%  Similarity=0.111  Sum_probs=86.4

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHH-HHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELK-RLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~-~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+|+.||+|.+.....   .....+..|.. +++.++||||+++++.+...+..+++|||++
T Consensus         2 ~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           2 VIGKGSFGKVLLAK--HKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            46778888888876  556789999999976432   12234445544 4678999999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|..++.... .+++.....++.||++||...+
T Consensus        80 ~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  113 (323)
T cd05575          80 GGELFFHLQRER-SFPEPRARFYAAEIASALGYLH  113 (323)
T ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999997654 5788888999999999998544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0592|consensus

Probab=99.38  E-value=1.1e-12  Score=101.56  Aligned_cols=119  Identities=18%  Similarity=0.124  Sum_probs=101.8

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ......|.+.+++|.|.+..|+++.  ...+++.+|+|++.+.-+-   ...-+..|-..|..+ .||.|++|+..|.+.
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~--~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAR--EKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE  146 (604)
T ss_pred             cCChhhcchhheeccccceeEEEee--ecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc
Confidence            3456778999999999999999998  6779999999999876441   123356788888888 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+|+|+||+++|+|.++|++-+ .+++.....++.+|+.|+...|
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH  191 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLH  191 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998865 6889999999999999998544

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.38  E-value=4.5e-12  Score=96.10  Aligned_cols=109  Identities=16%  Similarity=0.096  Sum_probs=89.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+++.+|+|.++....   .....+..|..++..+ .|+|++.+++++...+..++||||++
T Consensus         2 ~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           2 VIGRGSYAKVLLVR--LKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            46778888888875  456788999999986533   2244577888888887 69999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++...+ .+++..+..++.|++.||+..++
T Consensus        80 ~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~  114 (327)
T cd05617          80 GGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHE  114 (327)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999887644 58899999999999999985543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.37  E-value=7e-12  Score=93.06  Aligned_cols=117  Identities=18%  Similarity=0.165  Sum_probs=97.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.....++.++.+.+|.+.  ....+..+++|.++.... ....+..|+..++.++|+|++++++.+...+..++++
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKAT--DRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEE--EccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            3446666778888888888765  333578999999986543 3556889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++++|.+++......+++..+..++.|++.||+..++
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~  134 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS  134 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999998765468999999999999999996543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.37  E-value=4.5e-12  Score=96.20  Aligned_cols=113  Identities=17%  Similarity=0.151  Sum_probs=89.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----CcE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PHC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~~  138 (184)
                      |.+.+.++.|++|.+|.+.  ...+|..||+|.++...  ......+.+|+.+++.++||||+++++++...     ...
T Consensus         2 y~i~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAI--DTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             eEEEEEEeecCCeEEEEEE--ECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            4455778889999999876  55678999999987532  12244678999999999999999999887543     247


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++|||+. ++|.+++.... .+++.....++.||++||+..++
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~  121 (338)
T cd07859          80 YVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHT  121 (338)
T ss_pred             EEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999996 68999887644 58899999999999999986543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.37  E-value=7.3e-12  Score=91.69  Aligned_cols=113  Identities=20%  Similarity=0.271  Sum_probs=94.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |...+.++.|+.+.+|.+.  ....+..+++|.++.....  ....+..|+.+++.++|+|++++++.+...+..++++|
T Consensus         2 y~~~~~lg~G~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAV--NLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             ceeeeEeecCCCcEEEEEE--ECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            3445667888888888765  4456889999999865442  45678899999999999999999999988899999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++++|.+++.... .+++.....++.|++.||+..+
T Consensus        80 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh  116 (264)
T cd06626          80 YCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH  116 (264)
T ss_pred             cCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH
Confidence            999999999997654 4788888999999999998554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.37  E-value=4.1e-12  Score=94.18  Aligned_cols=114  Identities=18%  Similarity=0.114  Sum_probs=92.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +...+.++.++.+.+|.+.  ....++.+|+|.+.....  ...+.+.+|+.+++.++|+|++++++.+.+++..++++|
T Consensus         3 y~~~~~lg~g~~~~vy~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           3 YENLGLVGEGSYGMVMKCK--HKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             eeEeeeeccCCCeEEEEEE--ECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            4555778888888888875  344688999999865332  224567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++++++..+..... .+++.+...++.||++||+.+++
T Consensus        81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~  118 (286)
T cd07846          81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHS  118 (286)
T ss_pred             cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999998888765433 48899999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.37  E-value=6.6e-12  Score=92.38  Aligned_cols=111  Identities=18%  Similarity=0.273  Sum_probs=85.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      ++.|++|.+|.+..........+++|.+..... .....+.+|+..++.++|+||+++++.+...+..+++|||+++|+|
T Consensus         3 lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L   82 (269)
T cd05042           3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDL   82 (269)
T ss_pred             CCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcH
Confidence            567888888876421112345788888765432 2345678899999999999999999999999999999999999999


Q ss_pred             HHHHhhcC----CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         151 QDILENEQ----FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       151 ~~~l~~~~----~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++....    ...++.....++.||+.|++..++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  118 (269)
T cd05042          83 KNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ  118 (269)
T ss_pred             HHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            99997643    223577788999999999996554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.37  E-value=6.9e-12  Score=91.38  Aligned_cols=115  Identities=23%  Similarity=0.228  Sum_probs=93.2

Q ss_pred             cchhhhhhcccceeeecceee--ecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          68 KNSLMHDIVKFNGYLKTKELL--KEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~--~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.++.|+.|.+|.......  ..+..+|+|.++..... ....+..|+..+..++|+|++++++.+...+..+++|||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            446678888888888762211  12388999999766543 456788999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFK-LEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~-l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|.+++...... +++.+...++.|++.|++..++
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~  121 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES  121 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999765433 8999999999999999986543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.37  E-value=6.2e-12  Score=92.99  Aligned_cols=111  Identities=17%  Similarity=0.116  Sum_probs=91.8

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ...+.++.|+++.+|.+.  ...++..+|+|.++.... .....+.+|+..+..++|+|++++++.+...+..++++||+
T Consensus         7 ~~~~~ig~G~~~~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           7 TKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhheeEeecCCeEEEEEE--ECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            344567888888888865  445688999999875432 23456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|++.+++...  .+++.....++.|++.|+...+
T Consensus        85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh  118 (277)
T cd06641          85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLH  118 (277)
T ss_pred             CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc
Confidence            999999998653  4789999999999999998554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0594|consensus

Probab=99.37  E-value=4.3e-12  Score=93.69  Aligned_cols=117  Identities=16%  Similarity=0.163  Sum_probs=98.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcc-hhhhheeeecCC---
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDH-LVKFIGACLDPP---  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~n-i~~l~~~~~~~~---  136 (184)
                      ...+...+.+++|.++.||.+.  ...+|+.||+|.++.....  ......+|+.++..++|+| |+++++.+.+.+   
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar--~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKAR--SKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEE--EecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence            3445566779999999999987  7788999999999876442  3455689999999999999 999999988876   


Q ss_pred             ---cEEEEEeecCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 ---HCCLLTEYCPKGSLQDILENEQ---FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ---~~~lv~e~~~~gsl~~~l~~~~---~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                         .+++|+||++. +|..++....   ..++....+.+++||+.||+..|+
T Consensus        88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~  138 (323)
T KOG0594|consen   88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS  138 (323)
T ss_pred             ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence               78999999987 8999998755   467888999999999999996554

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.37  E-value=7.6e-12  Score=91.23  Aligned_cols=113  Identities=13%  Similarity=0.136  Sum_probs=93.0

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.++.+.+|.+.  ....|..+|+|.+.....  .....+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           3 EIIKKIGEGSFGKIYLAK--AKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             eEEEEecCCCcceEEEEE--EcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            445667788888888876  455688999999976432  2345677999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++... ...+++.....++.|+++||+.++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  118 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH  118 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999754 335789999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.37  E-value=6.1e-12  Score=92.60  Aligned_cols=117  Identities=17%  Similarity=0.164  Sum_probs=92.6

Q ss_pred             ccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.++.|+.|.+|.+.+... .....|++|...... ....+.+.+|+.+++.+.|+|++++++.+.+ +..+++|
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence            355667788899999888752211 123478999887554 3345678899999999999999999998765 5578999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++......+++..+..++.|++.||+.+++
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~  125 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES  125 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999998765568999999999999999986654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=8.9e-12  Score=93.84  Aligned_cols=114  Identities=21%  Similarity=0.231  Sum_probs=94.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.....++.|+.+.+|.+.  ....+..+|+|.+......   ....+..|+.++..++|+|++++++.+...+..++++
T Consensus         3 y~~~~~ig~g~~g~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVR--LKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             eEEeeeecCCccEEEEEEE--EcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            4455678888888998876  4446889999999865432   3456788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+.+++|.+++... ...+++.....++.|+++||+.++
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH  120 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH  120 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence            999999999998754 346889999999999999998654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.36  E-value=6e-12  Score=95.23  Aligned_cols=114  Identities=14%  Similarity=0.017  Sum_probs=91.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv  141 (184)
                      |.....++.|++|.+|++.  ...+|+.||+|.++....   .....+..|..++..+. |++++++.+++...+..|+|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAE--RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             ceEEEEEEecCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            3445678899999999876  556788999999986432   22345677888888876 56778888888888999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|..++.... .+++.+...++.|++.||+..++
T Consensus        80 ~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~  119 (323)
T cd05615          80 MEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHR  119 (323)
T ss_pred             EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987654 58899999999999999985543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.36  E-value=1e-11  Score=90.57  Aligned_cols=111  Identities=22%  Similarity=0.220  Sum_probs=91.7

Q ss_pred             hhhhhcccceeeecceee-ecCcEEEEeEeeccchhh-hHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRIDL-TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~~~-~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .++.|+.|.+|.+..... ..+..+++|.++...... ...+.+|+..+..++|+|++++++.+......++++||+++|
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG   81 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence            356778888888762211 237899999998765432 567889999999999999999999999989999999999999


Q ss_pred             CHHHHHhhc--------CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENE--------QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~--------~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.+++...        ...+++.....++.|+++||+..+
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH  122 (262)
T cd00192          82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA  122 (262)
T ss_pred             cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999875        357899999999999999998554

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.36  E-value=6.4e-12  Score=94.80  Aligned_cols=109  Identities=15%  Similarity=0.115  Sum_probs=87.8

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ...+|..||+|.++....   ........|..++.. .+|+|++++++.+...+..|+||||++
T Consensus         2 ~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           2 VLGKGSFGKVLLAE--LKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            46778888888876  456788999999986532   223445667777765 489999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|..++.... .+++.+...++.|+++||+..++
T Consensus        80 ~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~  114 (316)
T cd05620          80 GGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHS  114 (316)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654 57888899999999999985543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.36  E-value=8.2e-12  Score=92.87  Aligned_cols=119  Identities=20%  Similarity=0.243  Sum_probs=95.3

Q ss_pred             cccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.+...++.|+++.+|......   ...+..+|+|.++.........+..|+.++..++|+|++++++.+...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            345666778889988888764111   12345689999876554446678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQ------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++|+|.+++...+            ..+++.+...++.|++.||+..++
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~  138 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS  138 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999997432            247899999999999999985543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.36  E-value=6.6e-12  Score=92.80  Aligned_cols=119  Identities=14%  Similarity=0.099  Sum_probs=93.5

Q ss_pred             cccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.++....++.|+.+.+|.+...+.   ..+..+|+|.++.... .....+.+|+.+++.++|+|++++++.+..+...+
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~   85 (277)
T cd05062           6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   85 (277)
T ss_pred             HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence            3456667788899999887653321   2356899999865332 23456889999999999999999999999889999


Q ss_pred             EEEeecCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ---------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~---------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++.+..         ..+++.....++.|+++||+..++
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  137 (277)
T cd05062          86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA  137 (277)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997532         235677888999999999986654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.36  E-value=9.1e-12  Score=91.42  Aligned_cols=115  Identities=20%  Similarity=0.207  Sum_probs=91.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecC--Cc
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PH  137 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~  137 (184)
                      .|...+.++.|++|.+|.+.  ...+|..||+|.++....     .....+.+|+.+++.+.|+|++++++++.++  ..
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~--~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCY--DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             cceEeeEEecCCceEEEEEE--EcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence            35566778888888888765  445688999999864321     2245678899999999999999999987653  46


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++||+++|+|.+++.+.. .+++.....++.|++.||+..++
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~  124 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHS  124 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999997654 47888889999999999986543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0584|consensus

Probab=99.36  E-value=1.2e-12  Score=102.89  Aligned_cols=116  Identities=17%  Similarity=0.184  Sum_probs=97.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc--
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH--  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~--  137 (184)
                      ....+.+.++.|++-.||++.  +...|..||+-.++-...    ...+.|..|+.+++.|+|+||++++.++.+...  
T Consensus        40 Ry~k~~evLGrGafKtVYka~--De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   40 RYLKFDEVLGRGAFKTVYKAF--DEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             ceeehhhhcccccceeeeecc--ccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence            335667788888888888887  678888999777765433    335779999999999999999999999887654  


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +-+++|.+..|+|..|+++.+ .++..+...||+||++||..+++
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs  161 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHS  161 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhc
Confidence            779999999999999999876 57899999999999999998775

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.36  E-value=1e-11  Score=90.91  Aligned_cols=115  Identities=25%  Similarity=0.280  Sum_probs=95.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.+.++.|+.+.+|.+.   ...+..+|+|.++..... ...+.+|+.+++.++|+|++++++.+......++++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~---~~~~~~~~vK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGT---WNGTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEE---EcCCceEEEEEecCCccC-HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            4556677888889999888865   234578999999865432 456889999999999999999999998888999999


Q ss_pred             eecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++++|.+++.... ..+++.....++.|++.|++..+
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh  120 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE  120 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997643 46789999999999999998543

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.36  E-value=1e-11  Score=92.03  Aligned_cols=117  Identities=21%  Similarity=0.180  Sum_probs=91.1

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+...+.++.|+++.+|.+.+  ...+.    ++++|.+..... ....++..|+..+..+.|+||+++++++. ...
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~--~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~   82 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIW--IPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GAS   82 (279)
T ss_pred             HhhceeccccCccCCcceEEEEE--cCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCc
Confidence            34556668899999999998762  22333    578888764322 22356777888899999999999999875 455


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++++||+++|+|.+++......+++.....++.||+.||+..++
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE  127 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999998766678999999999999999996654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.35  E-value=1e-11  Score=90.99  Aligned_cols=107  Identities=19%  Similarity=0.162  Sum_probs=88.5

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|+.+.+|.+.  ...++..+|+|.+.....   ...+.+.+|+.+++.++|+|++++++.+.+++..++++||+++|+
T Consensus         2 g~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           2 GVGGFGRVELVK--VKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCceEEEEEE--ECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            456677777765  344588999999976432   234568899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++.+.. .+++..+..++.|+++||+..++
T Consensus        80 L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~  111 (262)
T cd05572          80 LWTILRDRG-LFDEYTARFYIACVVLAFEYLHN  111 (262)
T ss_pred             HHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh
Confidence            999997654 57889999999999999986544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.35  E-value=9.5e-12  Score=92.66  Aligned_cols=118  Identities=22%  Similarity=0.237  Sum_probs=94.8

Q ss_pred             cccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.+...++.|+++.+|.+...+   ...+..+++|.++.......+.+.+|+..++.++|+|++++++.+...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            345566778888888888765221   12345688999887665555678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++....               ..+++..+..++.||+.|++..+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  140 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA  140 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999997532               23788999999999999998554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.35  E-value=7.8e-12  Score=92.22  Aligned_cols=119  Identities=18%  Similarity=0.229  Sum_probs=94.8

Q ss_pred             cccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+.....++.|++|.+|.+....   ......+++|.+...... ....+.+|+.+++.++|+|++++++.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            345556678889999988875321   123567999998765433 4567889999999999999999999998888999


Q ss_pred             EEEeecCCCCHHHHHhhcC--------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ--------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~--------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++....        ..+++..+..++.|++.||+.+++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~  135 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN  135 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999997533        157899999999999999986543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.35  E-value=1.1e-11  Score=90.61  Aligned_cols=109  Identities=19%  Similarity=0.214  Sum_probs=88.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      ++.|++|.+|.+.+....++..+|+|.++....  ...+.+..|+.+++.+.|+|++++++.+. .+..+++|||+++|+
T Consensus         3 lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~   81 (257)
T cd05116           3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGP   81 (257)
T ss_pred             CCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCc
Confidence            567888888887544455678999999875432  33567889999999999999999998875 456789999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++.... .+++.....++.|++.||...++
T Consensus        82 L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~  113 (257)
T cd05116          82 LNKFLQKNK-HVTEKNITELVHQVSMGMKYLEE  113 (257)
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999997644 57899999999999999986543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.35  E-value=1e-11  Score=91.96  Aligned_cols=113  Identities=16%  Similarity=0.172  Sum_probs=91.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ...+.++.++.+.+|.+.  ...+|..||+|.++..... ....+..|+.+++.++|+|++++++.+...+..++++||+
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           3 KQLEKLGEGTYATVYKGR--NRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             eEeeeeccCCceEEEEEE--ECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            445667788888888876  4456889999999765332 2445678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++ ++.+++....  ..+++.+...++.|+++||+..++
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  118 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE  118 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            85 8888886543  458899999999999999986543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.35  E-value=9.7e-12  Score=92.80  Aligned_cols=118  Identities=18%  Similarity=0.211  Sum_probs=92.6

Q ss_pred             cccccchhhhhhcccceeeecceee------------ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhhe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL------------KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIG  130 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~  130 (184)
                      ..+.+.+.++.|++|.+|.+...+.            .+...||+|.++.... .....+.+|+.++..++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            3566677889999999987652211            1223589999876432 33456889999999999999999999


Q ss_pred             eeecCCcEEEEEeecCCCCHHHHHhhcC-----------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         131 ACLDPPHCCLLTEYCPKGSLQDILENEQ-----------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       131 ~~~~~~~~~lv~e~~~~gsl~~~l~~~~-----------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+...+..+++|||+++++|.+++....           ..+++..++.++.|++.||+..+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  146 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA  146 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999986432           23678888999999999998554

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.34  E-value=1.3e-11  Score=91.39  Aligned_cols=118  Identities=19%  Similarity=0.197  Sum_probs=95.3

Q ss_pred             ccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .+.+...++.|++|.+|.+...   ....+..+|+|.++.........+.+|+.+++.++|+|++++++.+...+..+++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (280)
T cd05092           6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV   85 (280)
T ss_pred             hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence            4556677888999998876411   1224568999998866555566789999999999999999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQ--------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~--------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||+++|+|.+++....              ..+++..+..++.|++.|++.+++
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~  140 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS  140 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997543              247889999999999999985543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.34  E-value=1.1e-11  Score=91.85  Aligned_cols=110  Identities=15%  Similarity=0.128  Sum_probs=90.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+.+.++.|+.+.+|.+.  +..++..+|+|.+.... ......+..|+.++..++|||++++++.+...+..++++||
T Consensus         3 ~~~~~~lg~g~~~~v~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAY--HLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             chheeeeccCCCeEEEEEE--EcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            4455678888888888876  55678899999987542 23345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|++..+.     .+++.....++.|++.||+..++
T Consensus        81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~  113 (279)
T cd06619          81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWS  113 (279)
T ss_pred             CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999986542     35788888999999999986554

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0585|consensus

Probab=99.34  E-value=4.2e-12  Score=97.19  Aligned_cols=116  Identities=22%  Similarity=0.195  Sum_probs=92.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--------------hhhHHHHHHHHHHHcCCCcchhh
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------------DLTRPLLLELKRLKDLHHDHLVK  127 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------------~~~~~~~~e~~~l~~l~h~ni~~  127 (184)
                      .++.|.+..-++.|.+|.|-++.  ..-.++.||+|++.+...              ...+.+.+|+.+|+++.|+|||+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar--~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLAR--DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEe--ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            56778887778888888887776  667899999999975321              12356889999999999999999


Q ss_pred             hheeeecC--CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         128 FIGACLDP--PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       128 l~~~~~~~--~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |+++..++  +.+|||+|||..|.+...-.. ...+++.+..++.+++..||.-+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYL  226 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYL  226 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHH
Confidence            99998775  689999999999986553322 22378899999999999999833

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.34  E-value=7.2e-12  Score=92.84  Aligned_cols=113  Identities=17%  Similarity=0.183  Sum_probs=91.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.|+.+.+|.+.  ...+|..+|+|.++....  .....+.+|+.+++.++|+|++++++.+.+.+..++++||
T Consensus         3 ~~~~~l~~g~~~~vy~~~--~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           3 EKLEKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             eeEEEecccCCeEEEEEE--ECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            344567778888888876  445788999999975432  2234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++ ++.+++.+....+++.....++.||++||+.+++
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~  117 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS  117 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            984 7888887655568999999999999999986554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.34  E-value=1.2e-11  Score=91.63  Aligned_cols=113  Identities=16%  Similarity=0.153  Sum_probs=91.1

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.++.+.+|.+.  ...++..||+|.++....  .....+.+|+.+++.++|+|++++++.+..++..++++||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           3 TKIEKIGEGTYGVVYKGR--NKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             eEeeEecccCceEEEEEE--ECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            344567788888888875  445688999999875432  2245678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENE--QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~--~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++ |++.+++...  +..+++.....++.|+++||+..++
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~  119 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS  119 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence            98 5888888643  2468899999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.34  E-value=1.3e-11  Score=90.52  Aligned_cols=111  Identities=21%  Similarity=0.269  Sum_probs=91.1

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ...+.++.|+++.+|.+.   ...|..+|+|.++....      .....+.+|+..++.++|+|++++.+.+.+.+..++
T Consensus         3 ~~~~~ig~g~~~~v~~~~---~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           3 TKGEVLGKGAYGTVYCGL---TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             cccceEeccCCeEEEEEE---EcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            445667888888888864   34678999999875421      123457889999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||+++|+|.+++.+.. .+++.....++.|++.||+..+
T Consensus        80 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  119 (265)
T cd06631          80 FMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH  119 (265)
T ss_pred             EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999997644 5788888999999999998654

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.34  E-value=1.6e-11  Score=89.34  Aligned_cols=108  Identities=24%  Similarity=0.254  Sum_probs=90.0

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      .++.|+.|.+|.+.  ... ++.||+|.++..... ....+.+|+.+++.+.|+|++++++.+...+..++++||+++++
T Consensus         2 ~lg~g~~g~v~~~~--~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           2 KIGKGNFGDVYKGV--LKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             ccccCCCceEEEEE--EeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            35677888888765  223 899999998765443 45678899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+++.+....+++.....++.|++.|++..+
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH  110 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE  110 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999775556788999999999999998544

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.34  E-value=1.3e-11  Score=91.79  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=93.9

Q ss_pred             cccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+.....++.|++|.+|.+...+   ...+..+|+|.++.... .....+.+|+.+++.+.|+|++++++.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            345566778889999988875222   12467899999876432 33456889999999999999999999999889999


Q ss_pred             EEEeecCCCCHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ---------------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~---------------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++....                     ..+++.+.+.++.|++.||+..++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~  148 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE  148 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999997421                     236778889999999999986543

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.33  E-value=1e-11  Score=93.88  Aligned_cols=114  Identities=14%  Similarity=0.025  Sum_probs=90.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      |.+...++.|++|.+|++.  ...++..+|+|.++....   ........|..++..+ .|++++.+++++...+..++|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAE--RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV   79 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence            3455678889999999876  455678999999986432   1233456677777776 578899999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|..++.... .+++..+..++.|++.||+..++
T Consensus        80 ~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~  119 (323)
T cd05616          80 MEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHS  119 (323)
T ss_pred             EcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987654 57889999999999999986543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG2345|consensus

Probab=99.33  E-value=3.8e-12  Score=90.13  Aligned_cols=118  Identities=14%  Similarity=0.057  Sum_probs=101.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----CcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~~  138 (184)
                      +.|.+...+++||+.-+++..  +..++..+|+|.+.....+..+..++|+...++++|||+++++......     ...
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~--~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVK--GLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             ceEEEeeeecCCCceeeeeec--ccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            457788889999988888877  8889999999999988877778889999999999999999998876543     359


Q ss_pred             EEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccCC
Q psy8884         139 CLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIHP  183 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~~  183 (184)
                      |++.+|...|+|.+.+..   ++..+++.+.+.++.+|++||...+.+
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~  146 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK  146 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999874   345789999999999999999866653

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.33  E-value=1.5e-11  Score=91.45  Aligned_cols=120  Identities=14%  Similarity=0.058  Sum_probs=92.9

Q ss_pred             ccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .+.+.+.+.++.|+.|.+|.+.....   ..+..||+|.++.... .....+.+|+..++.++|+|++++++.+..++..
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            34566778899999999998642221   2345899999875432 2234578899999999999999999999988999


Q ss_pred             EEEEeecCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQ---------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~---------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|||+++|+|.+++.+..         ...++.....++.|++.||+.+++
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  137 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA  137 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999997521         234566788899999999986654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.33  E-value=1.2e-11  Score=93.88  Aligned_cols=116  Identities=14%  Similarity=0.043  Sum_probs=92.6

Q ss_pred             cccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      |.+.+.++.|++|.+|.+... +..++..||+|.++....    .....+..|+.++..+ .|++++++++.+...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            345577888999999876421 234688999999976432    2234577899999999 5899999999999889999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++.... .+++.....++.||+.||+..++
T Consensus        82 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~  123 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHK  123 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997644 57889999999999999986543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.33  E-value=1.6e-11  Score=90.00  Aligned_cols=114  Identities=18%  Similarity=0.162  Sum_probs=94.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      |++.+.++.|+.+.+|.+.  ....+..+++|.+..... .....+.+|+..++.++|+|++++++.+...+..++++|+
T Consensus         3 y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           3 YELIEVIGVGATAVVYAAI--CLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             ceeeeeecCCCCeEEEEEE--EcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4555667888888888775  344778999999975432 2356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++....  ..+++.....++.|++.||+..+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh  119 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH  119 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999997642  36789999999999999998554

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.33  E-value=4.6e-12  Score=92.49  Aligned_cols=112  Identities=25%  Similarity=0.252  Sum_probs=93.7

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh--hHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL--TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~--~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+.++.|++|.+|...  ....++.+|+|.+.......  ......|+..+..++|+||+++.+.+...+..+++||+
T Consensus         2 ~~~~~lg~G~~g~v~~~~--~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAK--NKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEESSEEEEEEE--ETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             EEeEEEEeCCCEEEEEEE--ECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence            345678889999999877  55677799999999876532  22345699999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++.... .+++..+..++.|+++||+.++
T Consensus        80 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh  115 (260)
T PF00069_consen   80 CPGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLH  115 (260)
T ss_dssp             ETTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccc-cccccccccccccccccccccc
Confidence            99999999998433 5789999999999999998554

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG4279|consensus

Probab=99.33  E-value=1.3e-12  Score=104.37  Aligned_cols=108  Identities=18%  Similarity=0.201  Sum_probs=92.6

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      .++.|.+|.||-+.  +..+...+|+|.+...+....+-+..|+.+.+.++|.|||+++|++..++++-+.||-++||||
T Consensus       582 VLGKGTYG~VYA~R--D~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAAR--DMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EeecCceeEEEeec--cccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            35666677777655  5566678999999887776677788999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCC--CHHHHHHHHHHHHHHhhhc
Q psy8884         151 QDILENEQFKL--EPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       151 ~~~l~~~~~~l--~~~~~~~i~~qi~~gl~~~  180 (184)
                      .++|+..+.++  .+.+.-.+..||++||.-+
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence            99999887777  6788888999999999743

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.33  E-value=1.9e-11  Score=90.88  Aligned_cols=114  Identities=21%  Similarity=0.219  Sum_probs=90.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~lv~  142 (184)
                      +...+.++.|+.+.+|.+.  ...+++.+|+|.+..... .....+.+|+.+++.++|+||+++++.+...  +..+++|
T Consensus         3 ~~~~~~lg~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCR--LKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             eEEEEEeccCCceEEEEEE--ECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            4445667888888888876  444688999999975432 3355688999999999999999999988653  4689999


Q ss_pred             eecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++..   ....+++.....++.|++.||+..+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH  122 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH  122 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999988753   2345788889999999999998554

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.33  E-value=2.3e-11  Score=88.52  Aligned_cols=113  Identities=16%  Similarity=0.164  Sum_probs=94.3

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.|+.+.++...  ...++..+++|.+.....  .....+..|+..++.++|+|++++.+.+...+..++++||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           3 EIIKQIGKGSFGKVYLVR--RKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             eEEeeeccCCCeEEEEEE--EcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            344667788888888876  444688999999986543  3456688999999999999999999999888999999999


Q ss_pred             cCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++...   ...+++.....++.|+++||+..+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh  120 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH  120 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999764   357899999999999999998544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=1.6e-11  Score=90.71  Aligned_cols=112  Identities=16%  Similarity=0.222  Sum_probs=92.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC---CcchhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH---HDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~---h~ni~~l~~~~~~~~~~~lv  141 (184)
                      |+..+.++.++.+.+|.+.  ....+..+|+|.++.... .....+.+|+.+++.+.   |+|++++++.+...+..+++
T Consensus         3 y~~~~~l~~g~~g~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGK--HVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhheeccCCceEEEEE--EcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            4455678889999999876  456788999999875432 33456778998888886   99999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++++|.+++...  .+++.....++.|+++||...+
T Consensus        81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh  118 (277)
T cd06917          81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH  118 (277)
T ss_pred             EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998654  5789999999999999998544

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.32  E-value=1.2e-11  Score=91.32  Aligned_cols=113  Identities=16%  Similarity=0.160  Sum_probs=94.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv  141 (184)
                      |.+.+.++.++.+.+|.+.  ...+|..+|+|.+.....   .....+..|..+++.+. |+|++++++.+...+..+++
T Consensus         3 y~~~~~lg~g~~~~vy~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAK--EKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             ceEeeeecCCCceEEEEEE--EcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4555678889999999876  445789999999976432   22456788999999998 99999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++++++|.+++.+.+ .+++.....++.|++.||+.++
T Consensus        81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh  119 (280)
T cd05581          81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH  119 (280)
T ss_pred             EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998754 6899999999999999998543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.32  E-value=1.9e-11  Score=89.98  Aligned_cols=110  Identities=18%  Similarity=0.205  Sum_probs=83.3

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      ++.|++|.+|++..........+++|.++.... .....+.+|+..++.++|||++++++.+......+++|||+++|+|
T Consensus         3 lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   82 (268)
T cd05086           3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDL   82 (268)
T ss_pred             CCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcH
Confidence            567888888876411111223556776664432 3356788999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC---CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         151 QDILENEQ---FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       151 ~~~l~~~~---~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++.+..   ...++.....++.||++||+..+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  116 (268)
T cd05086          83 KSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH  116 (268)
T ss_pred             HHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence            99997542   23566777889999999998554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.32  E-value=1.6e-11  Score=91.43  Aligned_cols=116  Identities=18%  Similarity=0.144  Sum_probs=94.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~  139 (184)
                      +.|.....++.++.+.+|.+.  ...++..+++|.++.....  ....+.+|+.+++.+.|||++++.+.+...  +..+
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRAR--DKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEE--ECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            456666788889988888876  3345789999999865432  233467899999999999999999988776  8899


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+.+ +|.+++......+++.....++.||+.||+.+++
T Consensus        83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  124 (293)
T cd07843          83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD  124 (293)
T ss_pred             EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999985 8999887655568999999999999999996654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.32  E-value=1.6e-11  Score=91.72  Aligned_cols=118  Identities=16%  Similarity=0.196  Sum_probs=93.0

Q ss_pred             cccccchhhhhhcccceeeeccee--------------eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhh
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL--------------LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKF  128 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l  128 (184)
                      +.|++.+.++.|+.|.+|......              ..++..+|+|.++.... .....+.+|+.+++.++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            346777888999999998753211              12344789999976432 334678899999999999999999


Q ss_pred             heeeecCCcEEEEEeecCCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         129 IGACLDPPHCCLLTEYCPKGSLQDILENEQ----------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       129 ~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~----------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++++...+..+++|||+++|+|.+++.+..          ..+++.+...++.|++.||+..+
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  147 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS  147 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999997532          23567789999999999998544

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.32  E-value=1.8e-11  Score=91.52  Aligned_cols=118  Identities=20%  Similarity=0.159  Sum_probs=91.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.++.|++|.++.+..........+++|.++... ....+.+.+|+.++.++ +|||++++++.+...+..++++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~   82 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI   82 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence            456677899999999998752221122357888887432 23345688999999999 7999999999998888999999


Q ss_pred             eecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++....               ..+++.....++.|++.||+.+++
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~  137 (297)
T cd05089          83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE  137 (297)
T ss_pred             EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997532               247788999999999999986543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.32  E-value=2.8e-11  Score=91.04  Aligned_cols=95  Identities=13%  Similarity=0.150  Sum_probs=80.9

Q ss_pred             eeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhc-CCCCCH
Q psy8884          87 LLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-QFKLEP  163 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~  163 (184)
                      +..+++.||+|.++...  ......+..|+.+++.++|+||+++++.+...+..++++||+++|++.+++.+. ...+++
T Consensus        21 ~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~  100 (314)
T cd08216          21 HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPE  100 (314)
T ss_pred             ecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCH
Confidence            55689999999997642  233557889999999999999999999999999999999999999999999864 345788


Q ss_pred             HHHHHHHHHHHHHhhhcc
Q psy8884         164 MFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       164 ~~~~~i~~qi~~gl~~~~  181 (184)
                      .....++.|+++||+.++
T Consensus       101 ~~~~~~~~~l~~~L~~LH  118 (314)
T cd08216         101 LAIAFILKDVLNALDYIH  118 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            889999999999998544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.32  E-value=1.7e-11  Score=92.75  Aligned_cols=108  Identities=18%  Similarity=0.069  Sum_probs=84.7

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHH-HHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELK-RLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~-~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ....++.+|+|.++....   .....+..|.. +++.+.|+||+++++.+...+..|++|||++
T Consensus         2 ~lg~G~fg~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           2 VIGKGSFGKVLLAR--HKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             eeeeCCCeEEEEEE--ECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence            46778888888876  555678999999986432   11223444443 5678899999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|.+++.... .+.+.....++.||++||+..+
T Consensus        80 ~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH  113 (325)
T cd05602          80 GGELFYHLQRER-CFLEPRARFYAAEIASALGYLH  113 (325)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999997654 5677788889999999998544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.32  E-value=2.3e-11  Score=89.95  Aligned_cols=108  Identities=16%  Similarity=0.009  Sum_probs=88.0

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|++|.+|.+.  ...+|+.+|+|.+.....   .....+..|+.+++.++|||++++++.+...+..|+++||+++++
T Consensus         2 g~g~~g~vy~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           2 GKGGFGEVCACQ--VKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCceeEEEEE--EcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            567778888765  445688999999975432   223456789999999999999999999998899999999999999


Q ss_pred             HHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++.+.. ..+++.....++.|++.||...++
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~  113 (277)
T cd05577          80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ  113 (277)
T ss_pred             HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999997643 357899999999999999985543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.32  E-value=2.1e-11  Score=90.75  Aligned_cols=120  Identities=18%  Similarity=0.200  Sum_probs=94.2

Q ss_pred             ccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      .+.+...+.++.|++|.+|.+.....   .....+|+|.++.... .....+.+|+.++..+ +|+|++++++.+...+.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            34566667889999999988753221   2235789999875432 2345688899999999 79999999999998899


Q ss_pred             EEEEEeecCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENE---------------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~---------------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++|+|..++...               ...+++..+..++.|++.||+-+++
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~  150 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS  150 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999642               2457888999999999999985543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.32  E-value=1.7e-11  Score=94.48  Aligned_cols=113  Identities=16%  Similarity=0.120  Sum_probs=90.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-----cE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----HC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-----~~  138 (184)
                      +...+.++.|++|.+|.+.  ...+|+.||+|.+....  ......+.+|+.+++.++|+||+++++.+...+     ..
T Consensus         2 ~~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVT--DPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CcccceeeeCCCEEEEEEE--ECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence            3455678889999999876  45678999999986532  223456789999999999999999999988766     78


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++||+. +++.+.+.... .+++.....++.||+.||+.+++
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~  121 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHS  121 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999997 47888876543 68899999999999999986543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0694|consensus

Probab=99.32  E-value=4.2e-12  Score=100.75  Aligned_cols=119  Identities=18%  Similarity=0.137  Sum_probs=99.1

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...++.|.+...++.|.+|.|++..  ...+++.+|||++++..+   +..+....|-+++... +||.++.++.++.+.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae--~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAE--LKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK  441 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEE--EcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence            5677888898999999999999987  556788999999998876   3455677888887776 599999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+||||+.||++..+.+  ...+++.....++..|+.||..++.
T Consensus       442 ~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~  486 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHE  486 (694)
T ss_pred             CeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999443332  2368888888899999999987653

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.31  E-value=2.5e-11  Score=89.21  Aligned_cols=114  Identities=20%  Similarity=0.232  Sum_probs=91.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~  138 (184)
                      |...+.++.|+.|.+|.+.  ...++..+++|.++....     .....+.+|+.+++.++|+|++++++.+..  ....
T Consensus         4 ~~~~~~lg~g~~g~vy~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCY--DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             ccccceecCCCCEEEEEEE--EcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4556778889999888876  556788999999864321     223457889999999999999999998765  3568


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+++++|.+++.+.. .+++.....++.|++.||+.+++
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~  124 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHS  124 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999997654 47888899999999999986543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.31  E-value=1.5e-11  Score=95.48  Aligned_cols=111  Identities=11%  Similarity=0.006  Sum_probs=92.9

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ....|...+.++.|++|.+|.+.  +..+++.||+|....      ..+.+|+.+++.++||||+++++.+......+++
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~--d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv  161 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACI--DNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI  161 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEE--ECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence            34557777889999999999887  667889999997542      3467899999999999999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|++. ++|.+++.... .+++...+.++.||++||+..++
T Consensus       162 ~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~  200 (391)
T PHA03212        162 LPRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHE  200 (391)
T ss_pred             EecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99986 68988887644 57899999999999999996543

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.31  E-value=2.7e-11  Score=88.52  Aligned_cols=113  Identities=14%  Similarity=0.192  Sum_probs=91.0

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEEEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCCLLT  142 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~lv~  142 (184)
                      .....++.|+.+.+|.+.  ...+|..+|+|.++....  ...+.+..|+.+++.++|+|++++++.+..  ....++++
T Consensus         3 ~~~~~lg~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           3 EVLETIGKGSFGTVRKVR--RKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             eeeeeeccCCCeEEEEee--ecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            344567788888888876  556788999999875433  234567889999999999999999987654  45689999


Q ss_pred             eecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++++|.+++...   ...+++.....++.|+++||+..+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  122 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH  122 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999753   456889999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.31  E-value=2.4e-11  Score=90.65  Aligned_cols=109  Identities=15%  Similarity=0.163  Sum_probs=90.7

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      ..++.|+.|.+|.+.  ...+|..+|+|.+..........+.+|+.+++.++|+|++++++.+..++..+++|||+++++
T Consensus        26 ~~lg~g~~g~v~~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (292)
T cd06657          26 IKIGEGSTGIVCIAT--VKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  103 (292)
T ss_pred             HHcCCCCCeEEEEEE--EcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence            557788888888765  445788999999865443345568899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+++...  .+++.....++.|++.||+..++
T Consensus       104 L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~  134 (292)
T cd06657         104 LTDIVTHT--RMNEEQIAAVCLAVLKALSVLHA  134 (292)
T ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99987643  47888899999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.31  E-value=2.5e-11  Score=90.41  Aligned_cols=118  Identities=19%  Similarity=0.196  Sum_probs=94.2

Q ss_pred             cccccchhhhhhcccceeeeccee--------------eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhh
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL--------------LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKF  128 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l  128 (184)
                      ..+.+.+.++.|++|.+|.+....              ...+..||+|.+..... .....+.+|+.+++.++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            445666788889999888765211              11235789999876532 345678899999999999999999


Q ss_pred             heeeecCCcEEEEEeecCCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         129 IGACLDPPHCCLLTEYCPKGSLQDILENEQ----------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       129 ~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~----------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++.+...+..++++||+++++|.+++.+..          ..+++.....++.|+++||+.++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH  147 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE  147 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999998899999999999999999997543          25789999999999999998554

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.31  E-value=3.2e-11  Score=89.21  Aligned_cols=116  Identities=17%  Similarity=0.181  Sum_probs=92.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +.+...+.++.|++|.+|.+.+  ..+|.    +||+|.++.... .....+.+|+.++..+.|+|++++++.+.. ...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~--~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIW--IPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV   83 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEE--ecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence            4556668889999999998762  22333    589999875432 335568889999999999999999998865 457


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+++|++.+++......+++.+.+.++.|++.||+..++
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~  127 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE  127 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999998755568899999999999999996654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.31  E-value=2.5e-11  Score=88.89  Aligned_cols=114  Identities=23%  Similarity=0.230  Sum_probs=92.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+...++.|+.|.+|++.   ...++.+|+|.+...... ...+.+|+.+++.++|+|++++++.+. .+..++++|
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~---~~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGY---YNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE   80 (260)
T ss_pred             HHceeeeeeccCccceEEeee---cCCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence            345566778999999999875   345789999999865433 456889999999999999999998764 567899999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++... +..+++.+...++.|++.||+.+++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~  120 (260)
T cd05067          81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER  120 (260)
T ss_pred             cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            99999999998753 3467889999999999999986653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0577|consensus

Probab=99.31  E-value=2.1e-12  Score=101.48  Aligned_cols=110  Identities=21%  Similarity=0.238  Sum_probs=94.1

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .-++-|.+|-||.+.  +..+...||+|.+.-+..   +..++...|+..++++.|||++.+.|+|......|+|||||-
T Consensus        32 rEIGHGSFGAVYfAr--d~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl  109 (948)
T KOG0577|consen   32 REIGHGSFGAVYFAR--DVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL  109 (948)
T ss_pred             HHhcCCccceeEEee--ccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh
Confidence            346778888899887  778889999999976543   446778999999999999999999999999999999999998


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      | |-.+++.-...++.+..+.-|+.+.+.||+-++|
T Consensus       110 G-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS  144 (948)
T KOG0577|consen  110 G-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS  144 (948)
T ss_pred             c-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence            6 8888887666678889999999999999996665

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.30  E-value=2.1e-11  Score=90.37  Aligned_cols=116  Identities=20%  Similarity=0.204  Sum_probs=91.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeee-----cCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACL-----DPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~-----~~~~  137 (184)
                      +.+.+.+.++.|+++.+|.+.  ...+++.+|+|.++.... ....+.+|+.++..+ +|+|++++++.+.     .++.
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~--~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVL--NKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEE--ECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            345566778889999888876  556788999999875432 235577899999998 6999999999874     3456


Q ss_pred             EEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++|+|.+++..   ....+++.....++.|+++||...++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  142 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV  142 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh
Confidence            8999999999999998763   23457888899999999999986553

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=2.3e-11  Score=92.22  Aligned_cols=108  Identities=15%  Similarity=0.014  Sum_probs=84.9

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcC---CCcchhhhheeeecCCcEEEEEeec
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDL---HHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l---~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ++.|++|.+|.+.  ...+|..||+|.+......   .......|..++...   .||||++++..+...+..|++|||+
T Consensus         1 lG~G~~g~Vy~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVR--KKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEE--ECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            3567888888876  5567899999999754321   122344566666554   7999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|+|..++.+.. .+++.....++.||++||+..++
T Consensus        79 ~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~  114 (330)
T cd05586          79 SGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHK  114 (330)
T ss_pred             CCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987644 57899999999999999985543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.30  E-value=2.6e-11  Score=89.35  Aligned_cols=110  Identities=25%  Similarity=0.270  Sum_probs=86.8

Q ss_pred             hhhhhcccceeeecceeeecCc--EEEEeEeeccc-hhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGN--KVAIKNLKKSR-IDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~--~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|++|.+|.+.  ....+.  .+++|.++... ......+..|+.++..+ .|||++++++.+...+..+++|||++
T Consensus         2 ~lg~g~~g~v~~~~--~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           2 VIGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             cCCCCCCceEEEEE--EcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            46778888888875  223333  57888887533 23345688999999999 79999999999998889999999999


Q ss_pred             CCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|.+++....               ..+++.+...++.|++.||+..++
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~  130 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ  130 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999997532               246788999999999999985543

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.30  E-value=3.1e-11  Score=89.70  Aligned_cols=110  Identities=15%  Similarity=0.141  Sum_probs=91.7

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      ...++.|+.+.+|.+.  ....+..+++|.++.......+.+.+|+.+++.+.|+|++++++.+..++..++++||++++
T Consensus        24 ~~~lg~g~~g~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          24 FVKIGEGSTGIVCIAT--DKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             ceEeccCCCeEEEEEE--ECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            3567788888888765  44567899999987554444556789999999999999999999999899999999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|.+++...  .+++.....++.|++.||+..++
T Consensus       102 ~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~  133 (285)
T cd06648         102 ALTDIVTHT--RMNEEQIATVCLAVLKALSFLHA  133 (285)
T ss_pred             CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999773  57888999999999999985543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.30  E-value=1.7e-11  Score=90.85  Aligned_cols=114  Identities=20%  Similarity=0.113  Sum_probs=91.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |.+.+.++.|+.+.+|.+.  ...+++.||+|.++....  .....+.+|+.+++.++|+|++++.+.+..++..++++|
T Consensus         3 y~~~~~i~~g~~~~v~~~~--~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCR--NKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             eeEEEEecccCCeeEEEEE--eCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            4556677888888888875  444678999999875432  334678899999999999999999999999899999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++++.+..+..+ ...+++.+...++.||+.||+.+++
T Consensus        81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~  118 (288)
T cd07833          81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHS  118 (288)
T ss_pred             cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9998766665544 3458899999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=4.1e-11  Score=87.97  Aligned_cols=115  Identities=22%  Similarity=0.251  Sum_probs=92.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeecc-----chhhhHHHHHHHHHHHcCCCcchhhhheeeecC--Cc
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS-----RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PH  137 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~  137 (184)
                      .|.+.+.++.|+.|.+|.+.  ...++..+|+|.+...     .......+.+|+.+++.++|+|++++++.+.+.  ..
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCY--DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEE--EcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence            35566788889999999876  5567889999987532     112345688899999999999999999988664  45


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++++||+++++|.+++.+.. .+++.....++.|++.||..+++
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~  124 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHS  124 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999997644 47888899999999999986643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.30  E-value=2.5e-11  Score=89.91  Aligned_cols=113  Identities=15%  Similarity=0.133  Sum_probs=91.1

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +....++.|+.+.+|.+.  ...+|..+|+|.++....  .....+.+|+.+++.++|+|++++++.+...+..+++|||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           3 QKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             eeeeeecCCCceEEEEEE--ECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            444567778888888876  445788999999875432  2235688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +. +++..++... ...+++.....++.|+++||+.+++
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~  118 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS  118 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            96 5888888653 3467899999999999999986554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.30  E-value=2.3e-11  Score=91.35  Aligned_cols=119  Identities=19%  Similarity=0.204  Sum_probs=94.8

Q ss_pred             cccccchhhhhhcccceeeecceee-----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL-----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      +.+.+.+.++.|++|.+|.+...+.     ..+..+|+|.++.... .....+..|+.++..+ +|+|++++++.+...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            5577778899999999998753221     1235799999986432 2345678899999999 7999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..|+++||+++|+|.+++....               ..+++.+.+.++.|++.||+.+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~  158 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS  158 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997532               247888999999999999986553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=3.9e-11  Score=87.19  Aligned_cols=112  Identities=21%  Similarity=0.265  Sum_probs=93.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.++.+.+|.+.  ....++.+++|.+.....  .....+.+|+.++..++|+|++++.+.+...+..++++||
T Consensus         3 ~~~~~l~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           3 QLGDLIGRGAFGVVYKGL--NLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             eeeeEEcccCCeEEEEEE--EcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            445667788888888865  445678999999987654  3456788999999999999999999999888999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++... ..+++..+..++.|++.|+...+
T Consensus        81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH  116 (254)
T cd06627          81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH  116 (254)
T ss_pred             CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999765 36889999999999999997543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.30  E-value=3.3e-11  Score=88.94  Aligned_cols=119  Identities=15%  Similarity=0.080  Sum_probs=94.2

Q ss_pred             cccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+.+...++.|+.|.+|.+.....   ..+..+|+|.+..... .....+.+|+.++..+.|+|++++++.+......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            4456667888899999988653221   2346899999875432 33456889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ---------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~---------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++....         ..+++.....++.|++.||+..++
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  137 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA  137 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999996421         236788899999999999986554

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.30  E-value=2.4e-11  Score=91.08  Aligned_cols=120  Identities=18%  Similarity=0.172  Sum_probs=94.7

Q ss_pred             Cccccccchhhhhhcccceeeeccee-----eecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcC-CCcchhhhheeeec
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL-----LKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDL-HHDHLVKFIGACLD  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~  134 (184)
                      ..+.+.+...++.|++|.+|.+...+     ...+..+|+|.++... ......+.+|+.++..+ +|+||+++++.+..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            44556677889999999999775221     1234579999987542 23346688999999999 89999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ....+++|||+++|+|.+++.+..               ..+++.++..++.||++||+..+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  154 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA  154 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999997531               24678889999999999998554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.29  E-value=3.3e-11  Score=87.63  Aligned_cols=113  Identities=20%  Similarity=0.204  Sum_probs=94.0

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEEEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLLT  142 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~lv~  142 (184)
                      ...+.++.++.+.+|.+.  ...++..+++|.++....  ...+.+.+|+..++.++|+|++++.+.+...  +..++++
T Consensus         3 ~~~~~i~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           3 TRGELLGRGSFGSVYLAL--DKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             eeeeEeeecCceEEEEEE--ECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            344667788888888875  334688999999976543  3356788999999999999999999998887  8899999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++++|.+++.+.. .+++..+..++.|+++||+.+++
T Consensus        81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~  119 (260)
T cd06606          81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS  119 (260)
T ss_pred             EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998765 78899999999999999986543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.29  E-value=3.5e-11  Score=91.22  Aligned_cols=105  Identities=10%  Similarity=0.060  Sum_probs=85.8

Q ss_pred             cccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHH
Q psy8884          76 VKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDI  153 (184)
Q Consensus        76 ~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~  153 (184)
                      +.+.+|.+.  +...|+.||+|.++....  ...+.+.+|+.+++.++|+||+++++.+..++..++++||+.+|++.++
T Consensus        12 ~~~~v~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~   89 (328)
T cd08226          12 NLTSVYLAR--HTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSL   89 (328)
T ss_pred             CceeEEEEE--EcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHH
Confidence            445566654  556789999999875432  2245678899999999999999999999999999999999999999999


Q ss_pred             Hhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         154 LENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       154 l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +... ...+++.....++.|++.||+..++
T Consensus        90 l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~  119 (328)
T cd08226          90 LKTYFPEGMSEALIGNILFGALRGLNYLHQ  119 (328)
T ss_pred             HHhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8764 2357889999999999999986554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.29  E-value=3.7e-11  Score=90.66  Aligned_cols=114  Identities=20%  Similarity=0.225  Sum_probs=92.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |.....++.|+++.+|.+.  ...++..+|+|.+.....   .....+..|+..++.++|+|++++++.+...+..++++
T Consensus        27 f~~~~~lg~G~~~~v~~~~--~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          27 FTDLREIGHGSFGAVYFAR--DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhheeccCCCeEEEEEE--EcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            5555678888888888865  445688999999875432   22446788999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+. |++.+.+......+++.++..++.|++.||+..++
T Consensus       105 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  143 (317)
T cd06635         105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS  143 (317)
T ss_pred             eCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9997 48888887655568999999999999999986553

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.29  E-value=4.4e-11  Score=86.59  Aligned_cols=113  Identities=20%  Similarity=0.233  Sum_probs=94.5

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      ....++.++.+.+|...  ....+..+++|.+..........+.+|+..++.+.|+|++++.+.+...+..++++||+++
T Consensus         4 ~~~~l~~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           4 ILEKIGKGGFGEVYKAR--HKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             eeeeeccCCceEEEEEE--ECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            34557777888888765  3346889999999876544456788999999999999999999999988999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|.+++......+++.....++.|+++||+..++
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~  116 (253)
T cd05122          82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS  116 (253)
T ss_pred             CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence            99999998764568999999999999999986554

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.29  E-value=2.5e-11  Score=90.69  Aligned_cols=117  Identities=17%  Similarity=0.160  Sum_probs=92.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----  136 (184)
                      .+.|++...++.|+.+.+|.+.  ....|+.||+|.++....  .....+.+|+.+++.++|||++++++.+.+.+    
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKAR--DKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEE--ECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3456667778888888998876  445688999999975432  22345678999999999999999999887644    


Q ss_pred             ------cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 ------HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ------~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                            ..++++||+++ ++...+......+++.+...++.||+.||+.+++
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  134 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK  134 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                  78999999986 7777777655568999999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.29  E-value=3.6e-11  Score=88.51  Aligned_cols=114  Identities=19%  Similarity=0.236  Sum_probs=90.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecC------CcE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDP------PHC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~------~~~  138 (184)
                      |...+.++.|++|.+|.+.  ....+..+|+|.++.... ....+..|+.++..+ .|+|++++.+.+...      +..
T Consensus         8 y~~~~~lg~g~~g~vy~~~--~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           8 FELVELVGNGTYGQVYKGR--HVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhHHHheeecCCeEEEEEE--EcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            4555678888888888875  445678999999875432 245678899999888 699999999987642      458


Q ss_pred             EEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++||+++|+|.+++... ...+++.....++.|++.||+.+++
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~  129 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ  129 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999864 3467899999999999999986654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.29  E-value=2.6e-11  Score=91.03  Aligned_cols=116  Identities=21%  Similarity=0.228  Sum_probs=93.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..|.....++.|+.+.+|.+.  ....|+.||+|.+.....   .....+.+|+.+++.++|||++++.+.+.+.+..++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFAR--DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEE--EcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            345666778888888888765  345688999999874432   234568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+. |++.+++......+++..+..++.|++.||...++
T Consensus        93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~  133 (307)
T cd06607          93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS  133 (307)
T ss_pred             EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999997 57888776555568999999999999999985543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.29  E-value=4.5e-11  Score=87.30  Aligned_cols=114  Identities=22%  Similarity=0.195  Sum_probs=92.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeee-cCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL-DPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~-~~~~~~lv  141 (184)
                      .+.+.+.+.++.|+.+.+|.+    ...|..+|+|.++....  .+.+.+|+.+++.++|+|++++++.+. ..+..+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~----~~~~~~~~~k~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLG----DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEE----EEcCCcEEEEEeCCCch--HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            345666788888988888875    35688999999875432  456889999999999999999998754 45678999


Q ss_pred             EeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||+++|+|.+++.+.. ..+++.....++.|++.||+..++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  120 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA  120 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999997643 347889999999999999986543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.29  E-value=3.7e-11  Score=87.97  Aligned_cols=114  Identities=23%  Similarity=0.223  Sum_probs=92.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.+.++.|+.+.+|.+.   ...+..+|+|.++.... ....+.+|+.+++.++|+|++++.+.+.. ...++++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~---~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             ccceeEEeEecCccceEEEEEE---ecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            3456677888889988888764   33456799998875432 24568899999999999999999998877 7789999


Q ss_pred             eecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.+. ...+++..+..++.|++.||..++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH  119 (260)
T cd05073          80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE  119 (260)
T ss_pred             EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999763 345788889999999999998544

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.29  E-value=3.4e-11  Score=89.59  Aligned_cols=115  Identities=15%  Similarity=0.076  Sum_probs=91.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|+.+.+|.+.  ...+|..+|+|.++..... ....+.+|+.+++.++|+|++++.+.+..++..++++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGI--SRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEE--EcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            345566778888888888865  4556889999999754322 2335678999999999999999999999888999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+. +++.+.+......+++.....++.|+++||+..+
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH  120 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH  120 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9996 6787777654446778888899999999998654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.28  E-value=4.9e-11  Score=88.71  Aligned_cols=116  Identities=17%  Similarity=0.092  Sum_probs=92.3

Q ss_pred             cccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+...++.|+.|.+|.+... +..+|..||+|.++....    ...+.+..|+.++..+ +|+||+++++.+......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            345567888888888876521 224788999999976432    2245577899999999 5899999999998888999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++.... .+++.....++.|+++||+..++
T Consensus        82 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~  123 (290)
T cd05613          82 LILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHK  123 (290)
T ss_pred             EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999997654 57888889999999999986554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.28  E-value=4.7e-11  Score=88.40  Aligned_cols=112  Identities=16%  Similarity=0.177  Sum_probs=90.7

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ..+.++.++.+.+|.+.  ...+|..||+|.+.....  .....+.+|+..++.++|+|++++++.+.+.+..++++||+
T Consensus         3 ~~~~l~~g~~~~vy~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           3 KVEKIGEGTYGVVYKAR--DKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             hheEecCCCCeEEEEEE--EcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            34557778888888865  445789999999875432  22356788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      + +++.+++.... ..+++..+..++.|+++||+.+++
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~  117 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS  117 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            5 68999887543 357899999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.28  E-value=4.5e-11  Score=87.37  Aligned_cols=109  Identities=20%  Similarity=0.210  Sum_probs=87.3

Q ss_pred             hhhhhcccceeeecceeee-cCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLK-EGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .++.|++|.++.+.+.... .+..+|+|.++.... .....+.+|+.+++.+.|+|++++++.+. .+..++++||+++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~   80 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG   80 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence            3667888888876532221 336899999986554 23556889999999999999999999775 55689999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.+++.+.. .+++..+..++.|++.||+..+
T Consensus        81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh  112 (257)
T cd05060          81 PLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE  112 (257)
T ss_pred             cHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence            9999998655 6789999999999999998554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG4236|consensus

Probab=99.28  E-value=1.6e-11  Score=95.47  Aligned_cols=110  Identities=21%  Similarity=0.178  Sum_probs=92.6

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .+.++.|.+|.+|.+.  ...+|+.||||++++....  ....+.+|+.+++++.||.||.+...|++++.+++|||-+.
T Consensus       569 devLGSGQFG~VYgg~--hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGK--HRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             HhhccCCcceeeecce--ecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            3567778888888765  6678999999999876542  24568899999999999999999999999999999999998


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |..|...|..+...+++.....++.||+.||--+
T Consensus       647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~L  680 (888)
T KOG4236|consen  647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYL  680 (888)
T ss_pred             chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHh
Confidence            8767777777777899999999999999998643

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.28  E-value=3.1e-11  Score=89.96  Aligned_cols=115  Identities=13%  Similarity=0.148  Sum_probs=91.1

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .|...+.++.++.+.+|.+.  ...+|+.||+|.++....  .....+.+|+.+++.++|+|++++++.+...+..++++
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKAR--DRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEE--ecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            45566677888888888865  455788999999875432  22356778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||++ +++.+.+.... ..+++.....++.||+.||+.+++
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~  120 (294)
T PLN00009         81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS  120 (294)
T ss_pred             eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            9996 47888776533 235778888999999999986654

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.28  E-value=5.3e-11  Score=87.51  Aligned_cols=115  Identities=17%  Similarity=0.194  Sum_probs=92.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP------  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~------  136 (184)
                      +.|.+...++.++.+.+|.+.  ....+..+++|.++..... ...+.+|+.+++.+ .|+|++++++.+....      
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKAR--HKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             hheeheeeecCCCCeEEEEEE--ECCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            456667778888888888875  4446789999998865432 45688999999998 7999999999987644      


Q ss_pred             cEEEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..++++||+++++|.+++...   +..+++.....++.|+++||...+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH  130 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH  130 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            489999999999999988642   346889999999999999998554

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.28  E-value=4.3e-11  Score=87.32  Aligned_cols=115  Identities=14%  Similarity=0.076  Sum_probs=91.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~lv~  142 (184)
                      |.+.+.++.|+.+.+|...  ....++.+|+|.++....  ...+.+..|+.+++.++|+|++++.+.+.. ....++++
T Consensus         2 y~~~~~lg~g~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVR--HRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             ceEEEEecCCCCeEEEEEE--EcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            3455667888888888876  455678999999975432  234567889999999999999999887764 44678999


Q ss_pred             eecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||++++++.+++... ...+++.+...++.|++.|++..++
T Consensus        80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~  120 (257)
T cd08223          80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE  120 (257)
T ss_pred             cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999764 3457899999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0201|consensus

Probab=99.28  E-value=1.2e-12  Score=98.95  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=99.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      |+..+.++.|.+|.||++.  +..+++.||+|+++.... ...++..+|+.++.+++++||.+++|++..+..+|++|||
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~--d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAI--DNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccchhccccccceeeeee--eccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4555889999999999988  777889999999997654 4467789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+|++.++|+.+. .+++....-++++++.|+..+++
T Consensus        93 ~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~  129 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHS  129 (467)
T ss_pred             hcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhh
Confidence            99999999998755 44777888899999999986654

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.28  E-value=5e-11  Score=87.49  Aligned_cols=114  Identities=24%  Similarity=0.236  Sum_probs=90.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.+.+.++.|+++.+|.+.  . .....||+|.++.... ....+.+|+.+++.++|+|++++++.+. .+..+++||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~--~-~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e   80 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGT--W-NGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE   80 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEE--e-cCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence            345666778889999988875  2 2234699999986443 2356889999999999999999998764 456799999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++.+. ...+++.....++.|+++||+..++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~  120 (262)
T cd05071          81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER  120 (262)
T ss_pred             cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999764 3357889999999999999985543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.27  E-value=4e-11  Score=88.75  Aligned_cols=110  Identities=16%  Similarity=0.173  Sum_probs=90.2

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEEEEEee
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLLTEY  144 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~lv~e~  144 (184)
                      ...++.|+.+.+|++.  ....++.+|+|.++...  ......+.+|+.+++.+.|+|++++++.+...  +..++++||
T Consensus         4 ~~~l~~g~~~~vy~~~--~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           4 IAQIGEGTYGQVYKAR--NKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eEEeccCCCeEEEEEE--ECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            3556778888888876  34467899999998763  23345678899999999999999999999877  789999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++ ++.+++......+++.....++.|+++||+.++
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH  117 (287)
T cd07840          82 MDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH  117 (287)
T ss_pred             ccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            985 899888765457899999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.27  E-value=4.8e-11  Score=88.79  Aligned_cols=117  Identities=23%  Similarity=0.176  Sum_probs=91.4

Q ss_pred             cccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+...++.|++|.+|++....   ......+++|.+..... .....+.+|+.+++.+.||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            3455778889999988875221   12335788998875432 2345688999999999999999999999988999999


Q ss_pred             EeecCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQ-----------------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||+.+|+|.+++....                       ..+++.+...++.|++.||+.+++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~  145 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE  145 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999986421                       246788899999999999986543

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.27  E-value=4.6e-11  Score=88.55  Aligned_cols=114  Identities=25%  Similarity=0.227  Sum_probs=90.0

Q ss_pred             ccchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCCLL  141 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~lv  141 (184)
                      .....++.|++|.++...+.  ....+..||+|.++.... .....+.+|+.+++.++|+|++++.+.+...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            44567888888888764321  224577899999986533 2345688999999999999999999987653  468899


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++...  .+++.++..++.|++.||+..++
T Consensus        87 ~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~  125 (283)
T cd05080          87 MEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHS  125 (283)
T ss_pred             ecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999764  48899999999999999986543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.27  E-value=5.5e-11  Score=89.11  Aligned_cols=115  Identities=21%  Similarity=0.271  Sum_probs=90.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+...+.++.|++|.+|.+.  ....|.    .+|+|.+..... .....+.+|+.+++.+.|+|++++++.+... ..+
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~--~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           8 ELKRVKVLGSGAFGTVYKGI--WVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hceeccccccCCCccEEEEE--EecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            34555778999999999875  222333    678998876433 2234678999999999999999999988654 467


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|++.+++......+++.....++.|++.||+..++
T Consensus        85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~  127 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE  127 (303)
T ss_pred             eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998765568899999999999999986543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.27  E-value=6.4e-11  Score=86.71  Aligned_cols=114  Identities=24%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+.+.++.|+.+.+|.+.   ...+..+|+|.++..... .+.+.+|+.+++.++|+|++++++.+. .+..+++||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~---~~~~~~~~~k~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e   80 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGT---WNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             HHhhhhheeccccCceEEEEE---ecCCceeEEEEecCCCCC-HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence            345566778889999888864   234568999999865432 456889999999999999999998775 466899999


Q ss_pred             ecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++... ...+++.++..++.|++.||+..++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~  120 (260)
T cd05070          81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER  120 (260)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999764 3357899999999999999986543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.27  E-value=6.9e-11  Score=85.81  Aligned_cols=106  Identities=22%  Similarity=0.140  Sum_probs=88.2

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      +.|+.+.+|...  ....++.+|+|.++.....   ....+..|+.+++.+.|+|++++++.+..++..+++|||+++++
T Consensus         2 g~G~~~~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           2 GKGSFGKVLLVR--KKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCceEEEEEE--ECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            456777788765  3446889999999865432   34567889999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+++.... .+++.....++.|+++|+...+
T Consensus        80 L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh  110 (250)
T cd05123          80 LFSHLSKEG-RFSEERARFYAAEIVLALEYLH  110 (250)
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999998654 5789999999999999998544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.27  E-value=4.9e-11  Score=88.24  Aligned_cols=114  Identities=11%  Similarity=0.058  Sum_probs=88.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHH-HHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKR-LKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~-l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |...+.++.|++|.+|++.  ...+|..||+|.++.... .....+..|... ++..+|+|++++++.+...+..++++|
T Consensus         3 ~~~~~~ig~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMR--HVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             ceEEEEecccCCeEEEEEE--EcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            4555778889999999876  556789999999976532 223345556654 666789999999999998899999999


Q ss_pred             ecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++ |+|.+++..   ....+++.....++.||+.||+.+++
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  121 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS  121 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            997 588887764   23467899999999999999987664

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.26  E-value=5.4e-11  Score=86.63  Aligned_cols=113  Identities=14%  Similarity=0.141  Sum_probs=91.8

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      ...+.++.++.+.+|...  ...++..+++|.++....  .....+..|+.+++.++|+|++++.+.+......++++||
T Consensus         3 ~~~~~i~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           3 KVLKKLGKGSYGSVYKVK--RLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             eEeeeecCCCceeEEEEE--ECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            445667778888888765  445778999999986532  2345677899999999999999999998888999999999


Q ss_pred             cCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|.+++.+.   ...+++.....++.|+++||+..+
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh  120 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH  120 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999998752   245788999999999999998543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0662|consensus

Probab=99.26  E-value=2e-11  Score=82.98  Aligned_cols=112  Identities=17%  Similarity=0.166  Sum_probs=94.9

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.-+.+++|.+|.++++.  ...+++.||+|..+....  ....+.++|+-+++.++|.||++++....+...+-+|+||
T Consensus         5 dkmekigegtygtvfkar--n~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    5 DKMEKIGEGTYGTVFKAR--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             HHHHhhcCCcceeeEecc--cCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            344778899999999876  566788999999986543  2356678999999999999999999998888899999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.. +|..+....+..++.+....++.|+++||++-+
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch  118 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH  118 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh
Confidence            987 788888877778999999999999999998544

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.26  E-value=6e-11  Score=89.08  Aligned_cols=118  Identities=18%  Similarity=0.174  Sum_probs=93.7

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecC--Cc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDP--PH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~  137 (184)
                      ..+.|...+.++.|+.+.+|.+.  ...+|..||+|.++.....  ....+.+|+.+++.++|+|++++++.+...  +.
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRAR--DTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEE--ECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence            44566777888899999998876  4457889999999754321  223456899999999999999999988654  56


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++++||+.+ ++.+++......+++.+...++.|+++||+..++
T Consensus        83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~  126 (309)
T cd07845          83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE  126 (309)
T ss_pred             EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8999999975 8888887655568999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.26  E-value=4.8e-11  Score=89.89  Aligned_cols=120  Identities=17%  Similarity=0.148  Sum_probs=93.8

Q ss_pred             ccccccchhhhhhcccceeeeccee-----eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKEL-----LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      .+.+.+...++.|+.|.+|.+...+     ......+|+|.++.... .....+..|+.++..+ +|+||+++++++...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            3456677889999999998865211     12345789999875432 3345688899999999 699999999999988


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..++++||+++|+|.+++....               ..+++.+...++.|++.||...++
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~  152 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES  152 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999997531               347888899999999999986543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.26  E-value=2.9e-11  Score=88.89  Aligned_cols=112  Identities=20%  Similarity=0.191  Sum_probs=87.3

Q ss_pred             hhhhhcccceeeecceee----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          71 LMHDIVKFNGYLKTKELL----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      .++.|+.|.+|.+.....    ..+..+|+|.+..... .....+.+|+.+++.++|+||+++++.+...+..++++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            356778888887652211    1235789998865432 33556889999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENE------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|+|.+++.+.      ...+++.++..++.|++.||+..++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  124 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ  124 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh
Confidence            999999999742      2346788899999999999986543

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0579|consensus

Probab=99.26  E-value=5.5e-12  Score=99.99  Aligned_cols=113  Identities=15%  Similarity=0.061  Sum_probs=97.1

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      +..-++.|++|.||.++  ...++...|.|++.....+..++++-|+.++..++||+|+++++.|...+.+|+..|||.|
T Consensus        36 IiGELGDGAFGKVyKA~--nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   36 IIGELGDGAFGKVYKAV--NKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHhhhcCccchhhhhhh--cccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            33445667788888877  4455667788888877666688899999999999999999999999989999999999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |-+...+-.-+..+.+.++..+|+|++.||-.++|
T Consensus       114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs  148 (1187)
T KOG0579|consen  114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHS  148 (1187)
T ss_pred             chHhHHHHHhccccchHHHHHHHHHHHHHHHHHhh
Confidence            99999988877789999999999999999987765

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.26  E-value=7.4e-11  Score=87.67  Aligned_cols=116  Identities=16%  Similarity=0.068  Sum_probs=92.2

Q ss_pred             cccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch----hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.+.+.++.|+.+.+|.....+ ...+..+|+|.++....    .....+..|+.++..+ +|+|++++.+.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            3445678888888888765221 23567899999985432    2244577899999999 5999999999998889999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++.... .+++.....++.|+++||+..++
T Consensus        82 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~  123 (288)
T cd05583          82 LILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQ  123 (288)
T ss_pred             EEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987643 57888899999999999986543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0200|consensus

Probab=99.26  E-value=6.2e-11  Score=96.66  Aligned_cols=114  Identities=22%  Similarity=0.193  Sum_probs=94.7

Q ss_pred             ccchhhhhhcccceeeecceeeec-----CcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKE-----GNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~-----g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+.+.++.|.+|.++.+...+...     ...||||.++.... ...+.+..|+.+|+.+ .|+|++.+.|+|...+..+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            455678889999988876333222     45899999986543 4467789999999998 5999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhc
Q psy8884         140 LLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ++.||+..|+|..+|+..+               ..+...+++.++.|||.||..+
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L  434 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL  434 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998766               3488899999999999999854

>KOG0612|consensus

Probab=99.26  E-value=7.1e-12  Score=104.31  Aligned_cols=118  Identities=16%  Similarity=0.024  Sum_probs=101.4

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|.+..++|.|++|.|.+..  ...+++.+|.|.+..+.+.   ...-|..|-.+|..-+.++|+.++..|.+...
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr--~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~  149 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVR--HKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY  149 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEE--eeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence            455678888999999999999887  6678999999999987652   24457778888888899999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+||||++||+|..+|.+.. .+++.....+...|..||+..|
T Consensus       150 LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH  192 (1317)
T KOG0612|consen  150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH  192 (1317)
T ss_pred             eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998876 7888888888889998888544

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.25  E-value=7.9e-11  Score=86.20  Aligned_cols=112  Identities=16%  Similarity=0.124  Sum_probs=85.8

Q ss_pred             hhhhhcccceeeeccee-eecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEEEEeecCC
Q psy8884          71 LMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCLLTEYCPK  147 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~lv~e~~~~  147 (184)
                      .++.|++|.+|.+.... ...+..+|+|.+.... ......+..|+.+++.++|||++++++.+.. ++..++++||+.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            45778888888765211 1134579999986432 2335678889999999999999999997653 5568899999999


Q ss_pred             CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|.+++.+.....++.....++.|+++|++..++
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  116 (262)
T cd05058          82 GDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS  116 (262)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999998655456778888999999999986543

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.25  E-value=6.8e-11  Score=86.26  Aligned_cols=112  Identities=20%  Similarity=0.185  Sum_probs=91.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.+.+.++.|+.|.+|.+    ...++.+|+|.++...  ....+.+|+.++..++|+|++++.+.+.. +..+++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~----~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e   78 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQG----EYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVME   78 (254)
T ss_pred             HHceeeeeeccCCCCceEec----ccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEE
Confidence            44566778888988888864    4678899999987542  24568899999999999999999998765 45799999


Q ss_pred             ecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|+|.+++.... ..+++.....++.|++.|++..++
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (254)
T cd05083          79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES  118 (254)
T ss_pred             CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999997643 357888999999999999985543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.25  E-value=4.5e-11  Score=94.47  Aligned_cols=109  Identities=10%  Similarity=-0.022  Sum_probs=90.0

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|.+...++.|++|.||.+.  ....+..||+|....      ..+.+|+.+++.++|+||+++++.+...+..++++|+
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~--~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESS--HPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEE--ECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45666778888999999876  445678999996432      2356899999999999999999999888899999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +. |+|.+++......+++.++..++.|+++||+.+++
T Consensus       242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~  278 (461)
T PHA03211        242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHG  278 (461)
T ss_pred             cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            95 68999887655578999999999999999986553

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=9.2e-11  Score=85.80  Aligned_cols=109  Identities=16%  Similarity=0.073  Sum_probs=84.3

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHH-HHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKR-LKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~-l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.|+.+.+|.+.  ....|+.||+|.++.....   ....+..|... .....|+|++++++.+...+..|+++||++
T Consensus         3 ~l~~g~~~~v~~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           3 PISKGAFGSVYLAK--KRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             cCCcCCCeeEEEEE--ecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            35667888888876  4456889999999764321   12234445444 345589999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|.+++.... .+++.....++.|+++||...++
T Consensus        81 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~  115 (260)
T cd05611          81 GGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQ  115 (260)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999997654 57889999999999999986553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.24  E-value=7.5e-11  Score=89.60  Aligned_cols=117  Identities=19%  Similarity=0.182  Sum_probs=92.3

Q ss_pred             ccccchhhhhhcccceeeecceee-----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELL-----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      .+.+...++.|++|.+|.+.+.+.     ..+..+|+|.++.... .....+.+|+.++..+ .|+||+++++.+...+.
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            456677899999999988753211     1233789998875432 2356788999999999 79999999999998899


Q ss_pred             EEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+++|+|.+++....               ..+++.++..++.|++.||+.++
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH  151 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA  151 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997532               24678888999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.24  E-value=8.6e-11  Score=89.26  Aligned_cols=111  Identities=14%  Similarity=0.145  Sum_probs=90.6

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh--------------hHHHHHHHHHHHcCCCcchhhhheeee
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL--------------TRPLLLELKRLKDLHHDHLVKFIGACL  133 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~--------------~~~~~~e~~~l~~l~h~ni~~l~~~~~  133 (184)
                      +...++.|+++.+|.+.  ....++.||+|.++......              ...+.+|+.+++.++|+|++++++.+.
T Consensus        13 ~~~~ig~G~~g~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   90 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAY--DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV   90 (335)
T ss_pred             hhhcccCCCceeEEEEE--ECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe
Confidence            45678889999999876  55678899999987543211              124678999999999999999999999


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+..+++|||+. |++.+++.... .+++.....++.|++.||+.+++
T Consensus        91 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~  137 (335)
T PTZ00024         91 EGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHK  137 (335)
T ss_pred             cCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999997 58999887543 57889999999999999986654

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.24  E-value=9.4e-11  Score=89.30  Aligned_cols=118  Identities=21%  Similarity=0.185  Sum_probs=92.5

Q ss_pred             cccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeec-CCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLD-PPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~-~~~  137 (184)
                      +.|.+.+.++.|++|.+|.+...   ...+++.||+|.++.... ...+.+..|+.++..+ +|+||+++++.+.. ...
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            36777788999999999987522   223467899999975432 2245677899999999 79999999998765 467


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-----------------------------------------------------------
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-----------------------------------------------------------  158 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-----------------------------------------------------------  158 (184)
                      +++++||+++|+|.+++....                                                           
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            889999999999999986421                                                           


Q ss_pred             -CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         159 -FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       159 -~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ..+++..+..++.||++||+..+
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH  190 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLA  190 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHH
Confidence             25788899999999999998544

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.24  E-value=1.4e-10  Score=85.18  Aligned_cols=115  Identities=10%  Similarity=0.078  Sum_probs=90.0

Q ss_pred             cccchhhhhhcccceeeecceeee-cCcEEEEeEeeccch----------hhhHHHHHHHHHHHc-CCCcchhhhheeee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLK-EGNKVAIKNLKKSRI----------DLTRPLLLELKRLKD-LHHDHLVKFIGACL  133 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~vavK~l~~~~~----------~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~  133 (184)
                      |+..+.++.|+.+.+|.+.  ... .+..+|+|.+.....          ....++..|+.++.. ++|+|++++++.+.
T Consensus         2 y~~~~~ig~G~~~~v~~~~--~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   79 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVR--KKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL   79 (269)
T ss_pred             chhhhhhcCCCCceEEEEE--EcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence            4556778889999988876  223 467899999864321          123446678887765 79999999999999


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+..++++||+++++|.+++..   ....+++..+..++.|++.||+.+++
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999998853   34467889999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.24  E-value=1.1e-10  Score=85.79  Aligned_cols=116  Identities=18%  Similarity=0.149  Sum_probs=89.0

Q ss_pred             ccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc------
Q psy8884          67 FKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH------  137 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~------  137 (184)
                      .+.+.++.|++|.+|.+.... ...+..||+|.++....  .....+.+|+..++.++|+|++++++.+...+.      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            345678889999888765211 11347899999986432  234568899999999999999999998765443      


Q ss_pred             EEEEEeecCCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENE-----QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~-----~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++++||+++|+|..++...     ...+++.....++.|++.||+..++
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~  131 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN  131 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh
Confidence            79999999999999998542     2357889999999999999985543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.23  E-value=1e-10  Score=86.01  Aligned_cols=115  Identities=17%  Similarity=0.138  Sum_probs=86.7

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeec------CCcEE
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLD------PPHCC  139 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~------~~~~~  139 (184)
                      +.+.++.|++|.+|.+..........+|+|.++...  ....+.+..|+.+++.++|+|++++++.+..      ....+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            456788899999988752222222378999987642  2335668889999999999999999987643      23568


Q ss_pred             EEEeecCCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILEN-----EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~-----~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+++|+|.+++..     ....+++.....++.|++.||+..++
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  130 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS  130 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988743     22347899999999999999996654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.23  E-value=1e-10  Score=86.40  Aligned_cols=111  Identities=18%  Similarity=0.079  Sum_probs=87.3

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC-CcchhhhheeeecC--CcEEEEEe
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH-HDHLVKFIGACLDP--PHCCLLTE  143 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~--~~~~lv~e  143 (184)
                      +.+.++.|+.+.+|.+.  ...++..+|+|.++.... ........|+..+..+. |+|++++++.+.++  +..++++|
T Consensus         3 ~~~~lg~g~~~~v~~~~--~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQ--SRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             eEeeccccccceEEEEE--EcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            34557778888888876  455788999999875422 12223457888888885 99999999999887  88999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |++ |++.+.+.+....+++.+...++.|++.||+.++
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH  117 (282)
T cd07831          81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH  117 (282)
T ss_pred             cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            997 5888888765557899999999999999998654

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.23  E-value=8.1e-11  Score=88.16  Aligned_cols=117  Identities=19%  Similarity=0.181  Sum_probs=91.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----  136 (184)
                      .+.|.....++.|+.+.+|.+.  ...+++.||+|.+.....  .....+.+|+.+++.++|||++++++.+...+    
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~--~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKAR--HKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEE--ECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            3456666778888888888876  455789999999865432  22334568999999999999999999876543    


Q ss_pred             ----cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 ----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ----~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                          ..++++||+.+ ++.+++......+++.+...++.||++||+.+++
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~  137 (310)
T cd07865          89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR  137 (310)
T ss_pred             CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence                35999999975 8888887655568899999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.23  E-value=1.2e-10  Score=85.33  Aligned_cols=113  Identities=23%  Similarity=0.208  Sum_probs=89.0

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .+.+...++.|+.+.+|.+..   ..+..+|+|.+..... ..+.+.+|+.+++.++|+|++++++.+. .+..+++|||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~---~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTW---NGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF   81 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEE---cCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence            355567788898888887642   2335799998875432 2456889999999999999999988775 4668999999


Q ss_pred             cCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+|.+++... ...+++..+..++.|++.||+..++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~  120 (260)
T cd05069          82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER  120 (260)
T ss_pred             CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999764 3357889999999999999986543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.23  E-value=8.7e-11  Score=93.83  Aligned_cols=118  Identities=10%  Similarity=0.050  Sum_probs=94.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----  136 (184)
                      ...|.+.+.++.|++|.+|.+.  ...+|+.||+|.++....  .....+.+|+..+..+.|+|+++++..+...+    
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAK--RVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEE--EcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3567788899999999999876  556789999999976543  23455778999999999999999887665322    


Q ss_pred             ----cEEEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 ----HCCLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ----~~~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                          .++++|||+++|+|.+++...   ...+++.....++.|+++||+..++
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~  161 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS  161 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                368999999999999999743   2457888899999999999996654

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.23  E-value=1.4e-10  Score=85.84  Aligned_cols=120  Identities=15%  Similarity=0.085  Sum_probs=93.8

Q ss_pred             ccccccchhhhhhcccceeeecceee--ecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELL--KEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~  138 (184)
                      .+.+.+.+.++.|++|.+|.+.....  ..+..|++|.++... ......+.+|+.+++.+.|+|++++++.+.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            34566778899999999998762210  125789999987542 2335668899999999999999999998765 5778


Q ss_pred             EEEEeecCCCCHHHHHhhcC-------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQ-------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~-------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|+++|+|.+++....       ..+++.....++.|++.||+.+++
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~  135 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK  135 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997532       357899999999999999985543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.23  E-value=1.3e-10  Score=86.07  Aligned_cols=120  Identities=18%  Similarity=0.139  Sum_probs=93.2

Q ss_pred             ccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ...+.+.+.++.|+++.+|.+...+   ...+..||+|.++.... .....+..|+.++..++|+||+++++.+...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            3445666778888888888865211   12356899999985432 2345688899999999999999999999998999


Q ss_pred             EEEEeecCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENE---------------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~---------------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+++++|.+++...               ...+++.....++.|+++||+..++
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~  142 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS  142 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998531               1246788889999999999985543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0587|consensus

Probab=99.23  E-value=7e-11  Score=96.24  Aligned_cols=115  Identities=20%  Similarity=0.252  Sum_probs=94.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeec-----CCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLD-----PPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~-----~~~  137 (184)
                      +.+.+.+.++.|.++.+|...  +...++.+|+|.+..... ..++...|..+++.. .|||++.++|++..     ++.
T Consensus        19 d~~ei~evig~Gtygkv~k~k--~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGR--HVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CccEEEEEEeeccceeEEEEe--eeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            456677888899999999876  778889999998876432 245567788888876 69999999998764     578


Q ss_pred             EEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|||||.+||..+++++- +..++|..+..|++.++.|+.-++
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH  140 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH  140 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999863 567899999999999999998554

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.23  E-value=1.5e-10  Score=85.68  Aligned_cols=108  Identities=15%  Similarity=0.023  Sum_probs=83.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccchhh---hHHHHHHH---HHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL---TRPLLLEL---KRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~---~~~~~~e~---~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ++.|++|.+|.+.  +..+++.||+|.+.......   ...+..|.   ..++...|++++.+.+.+...+..++++||+
T Consensus         2 ig~g~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           2 IGRGGFGEVYGCR--KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             cccCCCeEEEEEE--EecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence            5678888888765  55678899999987643211   11233333   3455568999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|+|.+++.... .+++..+..++.|+++||+.+++
T Consensus        80 ~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~  115 (278)
T cd05606          80 NGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHN  115 (278)
T ss_pred             CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999887644 68999999999999999986654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=8e-11  Score=90.35  Aligned_cols=109  Identities=11%  Similarity=0.036  Sum_probs=90.0

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|.....++.|++|.+|.+.  ....+..||+|......      ...|+.+++.++|+||+++++.+...+..++++|+
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~--~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVAT--KPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEE--ECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            46667788899999999876  44457789999754332      34688999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +. |++.+++......+++..+..++.||+.||+.+++
T Consensus       139 ~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  175 (357)
T PHA03209        139 YS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHA  175 (357)
T ss_pred             cC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            86 58999887766678999999999999999986543

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.22  E-value=1.1e-10  Score=86.88  Aligned_cols=114  Identities=16%  Similarity=0.072  Sum_probs=89.6

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCc-----
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPH-----  137 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~-----  137 (184)
                      |+..+.++.|++|.+|.+.  ...+|+.||+|.++....  .....+.+|+.+++.+. |+|++++++.+...+.     
T Consensus         3 y~~~~~lg~g~~g~vy~~~--~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKAR--DKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             ceEeeEecccCCeEEEEEE--ECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4556778889999998876  445788999999875432  22456788999999995 6999999998876555     


Q ss_pred             EEEEEeecCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENE----QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~----~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .|++|||+++ ++.+++...    ...+++.....++.||++||+.+++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~  128 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK  128 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999996 788888643    2357899999999999999986654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.22  E-value=1.2e-10  Score=86.60  Aligned_cols=117  Identities=19%  Similarity=0.195  Sum_probs=92.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecC-----C
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDP-----P  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~-----~  136 (184)
                      .+.|...+.++.++.+.+|.+.  ....++.+|+|.+..... ....+.+|+.++..+ +|+|++++++.+...     +
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~--~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVT--NKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEE--ECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            3456677788888888888875  445788999999875432 235577888899888 799999999987643     3


Q ss_pred             cEEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++||+++|+|.+++..   ....+++.....++.|++.||...++
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  146 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN  146 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            58999999999999998863   23467899999999999999986543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0033|consensus

Probab=99.22  E-value=2.1e-12  Score=91.57  Aligned_cols=111  Identities=10%  Similarity=-0.011  Sum_probs=91.3

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+++.+.++.|.+..++...  ...+|+.+|+|.+.....  ...+++.+|+++.+.++||||+++..++......|+|+
T Consensus        12 ~y~l~e~igkG~FSvVrRc~--~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   12 NYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             hhhHHHHHccCchHHHHHHH--hccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45666778878777777665  557888999888865433  24667889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      |++.||+|..-+-.. ...++...-++++||+++|.
T Consensus        90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~  124 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALA  124 (355)
T ss_pred             ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            999999998877553 45678888899999999997

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.22  E-value=1.1e-10  Score=86.31  Aligned_cols=110  Identities=22%  Similarity=0.241  Sum_probs=90.7

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      ...++.++.+.+|.+.  ...+++.+|+|.++...  ....+.+..|+.+++.++|+|++++++.+...+..++++||++
T Consensus         4 ~~~ig~g~~~~vy~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           4 LEKLGEGTYGVVYKAR--DKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             ehcccccCcceEEEee--ecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            3556777888888765  44568899999998653  2334567789999999999999999999998899999999998


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ++|.+++.+....+++..+..++.|++.||+..+
T Consensus        82 -~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH  115 (282)
T cd07829          82 -MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH  115 (282)
T ss_pred             -cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence             5899999876446899999999999999998554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.22  E-value=1.5e-10  Score=85.84  Aligned_cols=108  Identities=16%  Similarity=0.042  Sum_probs=82.8

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccchh--h-hHHHHHHHH---HHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--L-TRPLLLELK---RLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~-~~~~~~e~~---~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ++.|++|.+|.+.  ...++..+|+|.++.....  . ...+..|..   ++....|+|++.+.+.+...+..+++|||+
T Consensus         2 lg~G~~g~Vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           2 IGRGGFGEVYGCR--KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             cccCCCeEEEEEE--ECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence            5678888888876  4456889999999764321  1 122334433   334457999999999998889999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|+|.+++.... .+++.....++.|++.||+..++
T Consensus        80 ~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~  115 (279)
T cd05633          80 NGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHN  115 (279)
T ss_pred             CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987654 58999999999999999985543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.21  E-value=1.5e-10  Score=85.24  Aligned_cols=103  Identities=14%  Similarity=0.033  Sum_probs=81.4

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      ++.|++|.++...  ...++..+|+|.++.......     |...... .+|+|++++++.+...+..+++|||+++|+|
T Consensus        24 lg~g~~g~v~~~~--~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L   96 (267)
T PHA03390         24 LIDGKFGKVSVLK--HKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDL   96 (267)
T ss_pred             ecCCCceEEEEEE--EcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcH
Confidence            4788888888876  556788999999876533211     1211221 2799999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         151 QDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       151 ~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++.... .+++.+...++.|+++||+..++
T Consensus        97 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~  127 (267)
T PHA03390         97 FDLLKKEG-KLSEAEVKKIIRQLVEALNDLHK  127 (267)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99998765 68999999999999999986554

>KOG0195|consensus

Probab=99.21  E-value=5.3e-12  Score=90.92  Aligned_cols=98  Identities=20%  Similarity=0.342  Sum_probs=84.2

Q ss_pred             ceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhc-CCCC
Q psy8884          85 KELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-QFKL  161 (184)
Q Consensus        85 ~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~-~~~l  161 (184)
                      |++.+.|..++.|.++....  ...++|..|...++-..||||..++|.|.+++.+.++..||+.|||+..|... ....
T Consensus       207 wrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvv  286 (448)
T KOG0195|consen  207 WRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVV  286 (448)
T ss_pred             ccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEE
Confidence            34668888899999876543  34677999999999999999999999999999999999999999999999865 3456


Q ss_pred             CHHHHHHHHHHHHHHhhhccC
Q psy8884         162 EPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       162 ~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+..+++.+||+||++++|
T Consensus       287 d~sqav~faldiargmaflhs  307 (448)
T KOG0195|consen  287 DHSQAVRFALDIARGMAFLHS  307 (448)
T ss_pred             ecchHHHHHHHHHhhHHHHhh
Confidence            788899999999999998765

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.20  E-value=1.4e-10  Score=84.89  Aligned_cols=115  Identities=21%  Similarity=0.170  Sum_probs=88.2

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      |.+.+.++.|+.|.+|.+.  ....+..+++|.++....     .....+..|+.+++.++|||++++++.+.+.+..++
T Consensus         2 y~i~~~ig~g~~g~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVK--DKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             ceeeeeecCCCCceEEEEE--ecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence            3455678889999988875  333445566666654221     123346678889999999999999999988889999


Q ss_pred             EEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||+++++|.+++..   ....+++.+...++.|+++||..+++
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  124 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ  124 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864   23468899999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.20  E-value=1.3e-10  Score=86.00  Aligned_cols=112  Identities=21%  Similarity=0.180  Sum_probs=88.7

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEeec
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      +.+.++.++.+.+|.+.  ....++.|++|.+..... .......+|+..+..+. |+|++++++.+...+..+++|||+
T Consensus         3 ~~~~ig~g~~g~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           3 VIKQLGDGTFGSVYLAR--NKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             eheeeccCCceEEEEEE--ECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            44567788888888875  334578899999875432 11223457888999998 999999999999999999999999


Q ss_pred             CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       +|++.+++.... ..+++..+..++.|++.||..+++
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~  117 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK  117 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence             789999887653 467999999999999999986543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.20  E-value=1.7e-10  Score=86.72  Aligned_cols=113  Identities=18%  Similarity=0.240  Sum_probs=89.4

Q ss_pred             ccchhhhhhcccceeeecceeee--cCcEEEEeEeeccc---hhhhHHHHHHHHHHHcCCCcchhhhheeeecC--CcEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLK--EGNKVAIKNLKKSR---IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--PHCC  139 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~~~~  139 (184)
                      .+...++.|+.+.+|.+.  ...  .+..||+|.+....   ........+|+.++..++|||++++++.+...  +..+
T Consensus         3 ~~~~~ig~g~~g~v~~~~--~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           3 EIEGCIGRGTYGRVYKAK--RKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             eEEEEeccCCcEEEEEEE--ecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            444667888888888876  334  68899999998743   23345678899999999999999999999887  7899


Q ss_pred             EEEeecCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENE----QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~----~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+||+++ ++.+++...    ...+++.....++.|++.||+..++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  126 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS  126 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh
Confidence            99999985 677766532    2357888999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.20  E-value=1.5e-10  Score=85.61  Aligned_cols=111  Identities=19%  Similarity=0.179  Sum_probs=90.4

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .+.++.++.+.+|.+.  ....|+.+++|.++.....  ....+..|+..++.++|+|++++++.+..++..++++||++
T Consensus         4 ~~~i~~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           4 LGKIGEGTYGVVYKAR--DKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ceeeecCCCceEEEEE--cCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            3456778888888765  3446889999998765432  34567889999999999999999999999999999999998


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      + ++.+.+......+++.++..++.|+++||+.+++
T Consensus        82 ~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~  116 (283)
T cd05118          82 T-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS  116 (283)
T ss_pred             C-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5 8888887755578899999999999999986543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.20  E-value=2.3e-10  Score=86.21  Aligned_cols=109  Identities=22%  Similarity=0.248  Sum_probs=89.2

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      +.++.|+.|.+|.+.  ...+|..+++|.+.....   .....+..|+.+++.++|+|++++++.+.+.+..|+++||+.
T Consensus        27 ~~lg~g~~g~v~~~~--~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  104 (313)
T cd06633          27 HEIGHGSFGAVYFAT--NSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL  104 (313)
T ss_pred             eeeccCCCeEEEEEE--ECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence            447778888888875  456788999999975432   223467889999999999999999999999999999999996


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       |++.+++......+++.+...++.|++.|++.++
T Consensus       105 -~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH  138 (313)
T cd06633         105 -GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH  138 (313)
T ss_pred             -CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence             5788888765556889999999999999998554

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0608|consensus

Probab=99.20  E-value=2.1e-11  Score=96.60  Aligned_cols=127  Identities=14%  Similarity=0.111  Sum_probs=102.0

Q ss_pred             CCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh---hHHHHHHHHHHHcCCCcch
Q psy8884          49 KGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL---TRPLLLELKRLKDLHHDHL  125 (184)
Q Consensus        49 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~---~~~~~~e~~~l~~l~h~ni  125 (184)
                      +.|-...|.+...+...|.....++.|++|.|.+..  .+.+...+|.|.+++.+...   ...+..|..+|...+.++|
T Consensus       614 KESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~--KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WV  691 (1034)
T KOG0608|consen  614 KESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVR--KVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWV  691 (1034)
T ss_pred             hhhhHHHHHHhhccccceEEEeeecccccceeEEEe--ecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcce
Confidence            444455667777777778777889999999999876  55667789999998876533   3446789999999999999


Q ss_pred             hhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         126 VKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       126 ~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      |+|+..|.+.+.+|+||+|++||++..+|.+.+. +++.....++..+..|+.
T Consensus       692 VrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAie  743 (1034)
T KOG0608|consen  692 VRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIE  743 (1034)
T ss_pred             EEEEEEeccCCceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999988774 455555556667777766

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=1.1e-10  Score=90.73  Aligned_cols=111  Identities=14%  Similarity=0.041  Sum_probs=90.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|.+...++.|++|.+|.+...+...+..||+|.+....     ...+|+.+++.++|+||+++++.+...+..+++||+
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~  167 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK  167 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence            366667788899999998754344556789999886532     346899999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +. +++.+++... ..+++..+..++.||+.||+.+++
T Consensus       168 ~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH~  203 (392)
T PHA03207        168 YK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLHG  203 (392)
T ss_pred             cC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            86 5888888543 468999999999999999986553

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.19  E-value=2.8e-10  Score=85.51  Aligned_cols=114  Identities=20%  Similarity=0.230  Sum_probs=91.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      ++....++.++.|.+|.+.  ...++..+|+|.+.....   .....+..|+.+++.++|+|++++.+++...+..++++
T Consensus        17 ~~~~~~lg~g~~g~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          17 FSDLREIGHGSFGAVYFAR--DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHheeeCCCEEEEEEE--EcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            4444667788888888876  445678999999874322   22446778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+. |++.+++......+++..+..++.|++.||..+++
T Consensus        95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~  133 (308)
T cd06634          95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS  133 (308)
T ss_pred             EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9997 58888876555568899999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0576|consensus

Probab=99.19  E-value=4.7e-12  Score=100.38  Aligned_cols=118  Identities=19%  Similarity=0.150  Sum_probs=101.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.|.+...++.+.+|.+|+..  ++.+++..|+|.++............|+.+++..+|+||+.++|.+...+..|+.
T Consensus        13 P~ddyellqrvgsgTygdvyKaR--d~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKAR--DKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             CccchhheeeecCCcccchhhhc--ccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            34556666778899999999987  8889999999999987655566677899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||.+|+|.+...-- ..+++.++...++..++|++.+++
T Consensus        91 MEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs  130 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHS  130 (829)
T ss_pred             EEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhc
Confidence            9999999998876543 368999999999999999997664

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.19  E-value=2.4e-10  Score=84.66  Aligned_cols=116  Identities=19%  Similarity=0.226  Sum_probs=91.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeec------CC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLD------PP  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~------~~  136 (184)
                      ..++..+.++.|+++.+|.+.  ....+..+|+|.+..... ....+..|+.++..+ +|+|++++++.+..      .+
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~--~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGR--HVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEE--EcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            445666778889888898876  445778999999865432 234577888888888 69999999998753      45


Q ss_pred             cEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|||+++|+|.+++... ...+++.....++.|+++||+.+++
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~  139 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA  139 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999753 3457888889999999999986654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.18  E-value=1.4e-10  Score=87.82  Aligned_cols=113  Identities=16%  Similarity=0.140  Sum_probs=92.0

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-----cE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----HC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-----~~  138 (184)
                      |.+...++.++.+.+|++.  ...++..+|+|.+....  ....+.+..|+..++.++|+|++++.+.+...+     ..
T Consensus         2 y~i~~~ig~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAV--DKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             ceeeeeecCCCCeEEEEEE--eCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            4455778888888888876  44568899999987643  233567889999999999999999999887765     78


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++|||+++ ++.+++.+.. .+++.....++.|+++||+.+++
T Consensus        80 ~lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~  121 (330)
T cd07834          80 YIVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHS  121 (330)
T ss_pred             EEEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999985 8888887654 68899999999999999986654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.18  E-value=1.5e-10  Score=87.97  Aligned_cols=114  Identities=16%  Similarity=0.098  Sum_probs=89.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec----CCcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~~  138 (184)
                      .|...+.++.|+.+.+|.+.  ...+|..||+|.+.....  .....+..|+.+++.++|+||+++++.+..    ....
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~--~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAI--DTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEE--EcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            34455667888888888776  556789999999875422  334567789999999999999999987653    3568


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+. |++.+++.... .+++.....++.||+.||+.+++
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~  125 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHS  125 (334)
T ss_pred             EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999996 58988886544 58999999999999999986654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.17  E-value=2e-10  Score=87.50  Aligned_cols=114  Identities=17%  Similarity=0.108  Sum_probs=89.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP------  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------  135 (184)
                      +.|.....++.|++|.+|.+.  ...++..||+|.++....  .....+.+|+.+++.++|+||+++++++...      
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAY--DTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhheecccCCCeEEEEEE--ECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            446666788999999998876  556788999999975432  2244577899999999999999999877532      


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ...+++++++ +++|..++...  .+++.....++.|+++||+.+++
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  136 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHS  136 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            4578999987 67898887643  48899999999999999986543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.17  E-value=2.3e-10  Score=87.00  Aligned_cols=114  Identities=15%  Similarity=0.096  Sum_probs=89.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeecc--chhhhHHHHHHHHHHHcC-CCcchhhhheeeecC--CcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS--RIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDP--PHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~--~~~  138 (184)
                      +.|.+.+.++.|+.+.+|.+.  ...+|..+|+|.+...  .......+.+|+.++..+ +|+||+++++.+...  ...
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~--~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAI--DRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEE--EcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            456677888889888888875  4456789999988643  222344577899999999 999999999987643  468


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||++ ++|..++...  .+++.....++.||+.||+.+++
T Consensus        85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~  125 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHS  125 (337)
T ss_pred             EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999998 4899888764  57888889999999999986654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.17  E-value=2.3e-10  Score=87.32  Aligned_cols=112  Identities=16%  Similarity=0.114  Sum_probs=89.6

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC---------
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP---------  135 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~---------  135 (184)
                      .|...+.++.|+++.+|.+.  ...+|..||+|.+..........+.+|+.+++.++|+|++++++.+...         
T Consensus         6 ~y~~~~~Lg~g~~g~vy~~~--~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           6 RYMDLRPLGCGSNGLVFSAV--DSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             ceEEEEEecCCCCEEEEEEE--ECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            35556778888888888876  5567889999999776555456688999999999999999998765543         


Q ss_pred             -----CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 -----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 -----~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                           ...++++||++ +++.+++...  .+++.....++.||++||..++
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH  131 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH  131 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence                 35789999998 5888888643  4788999999999999998554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.17  E-value=4.3e-10  Score=83.95  Aligned_cols=118  Identities=13%  Similarity=0.109  Sum_probs=92.2

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+...+.++.|+.+.+|.+.  ...++..+|+|.++.... .....+..|+..+... .|+|++++++.+.+....+
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~   90 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMR--FKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF   90 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEE--ECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence            45566777888889888888875  334588999999976433 2344566777766666 4999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++||+.+ ++..++......+++.....++.|+++||+..++
T Consensus        91 ~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          91 ICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             EEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999864 7777776544578899999999999999997664

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.16  E-value=2.8e-10  Score=86.82  Aligned_cols=114  Identities=16%  Similarity=0.103  Sum_probs=89.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC-----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-----  136 (184)
                      +.|.....++.|+.|.+|.+.  ....|..||+|.++....  .....+..|+.+++.++|+||+++.+.+...+     
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSAL--DRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEE--ECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            346666778899999998876  455788999999864322  22445778999999999999999999887543     


Q ss_pred             -cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 -HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 -~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ..++++||+ ++++.+++...  .+++.....++.|+++||+.+++
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~  136 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHA  136 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence             358999998 67898888653  47899999999999999986543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.16  E-value=3.2e-10  Score=86.04  Aligned_cols=113  Identities=19%  Similarity=0.114  Sum_probs=89.5

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~lv  141 (184)
                      .|.....++.++.+.+|.+.  ...++..+|+|.+.....  .....+..|+.+++.++|||++++.+++.. .+..+++
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSAR--DQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             ceEEEEeecccCCeEEEEEE--ECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence            45666778889999998876  566789999998864322  234567789999999999999999998865 5678999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||+. +++..++...  .+++.....++.|+++||+..++
T Consensus        89 ~e~~~-~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~  126 (328)
T cd07856          89 TELLG-TDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHS  126 (328)
T ss_pred             eehhc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99984 5888888653  36778888899999999986654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.16  E-value=2.7e-10  Score=87.45  Aligned_cols=114  Identities=14%  Similarity=0.066  Sum_probs=89.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|...+.++.|++|.+|.+.  +...|..||+|.++....  .....+.+|+.+++.++||||+++++.+...     
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEE--EcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            3456677889999999999876  556789999999975422  2345678899999999999999999987643     


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ...|++|||+.+ ++...+..   .+++.....++.|+++||+.+++
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~  141 (359)
T cd07876          98 FQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS  141 (359)
T ss_pred             cceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence             247999999986 56666543   36788888999999999986554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.16  E-value=2.5e-10  Score=90.00  Aligned_cols=112  Identities=13%  Similarity=0.100  Sum_probs=86.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC--------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--------  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--------  135 (184)
                      ..|...+.++.|++|.||.+.  ...++..||+|.+....    ....+|+.+++.++|+|++++.+.+...        
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~--~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAI--CIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEE--ECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            457777889999999999876  55678899999886532    2245799999999999999998765321        


Q ss_pred             CcEEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++|||+++ ++.+++..   ....+++.....++.||+.||+.+++
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~  188 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS  188 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            246799999986 67776653   34468899999999999999986554

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.15  E-value=3.7e-10  Score=85.86  Aligned_cols=113  Identities=15%  Similarity=0.132  Sum_probs=89.5

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----CcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~~  138 (184)
                      .|.+.+.++.|+.+.+|.+.  ...+|..||+|.++.... .....+..|+.+++.++|+|++++++.+...     ...
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSAT--HKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEE--EcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46666788889988888876  556789999999975322 2345677899999999999999999876543     357


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+.+ ++..++...  .+++.....++.|+++||+.+++
T Consensus        84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~  124 (336)
T cd07849          84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHS  124 (336)
T ss_pred             EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999975 888877543  47889999999999999986654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.14  E-value=4.1e-10  Score=85.71  Aligned_cols=113  Identities=15%  Similarity=0.077  Sum_probs=89.5

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----CcE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PHC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~~  138 (184)
                      |.....++.|+.+.+|.+.  ...++..||+|.++...  ......+.+|+.+++.++|+|++++.+.+...     ...
T Consensus         7 y~~~~~lg~G~~~~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAK--NSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             eeEEEEeccCCCeEEEEEE--ecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            4555678888888888876  56678999999987532  22244567899999999999999999877643     348


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||+. ++|.+++...+ .+++.....++.|++.||..+++
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~  126 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHS  126 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999997 68988887644 68899999999999999986654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.14  E-value=5.7e-10  Score=82.94  Aligned_cols=114  Identities=14%  Similarity=0.110  Sum_probs=84.9

Q ss_pred             cccchhhhhhcccceeeecceee-ecCcEEEEeEeeccchh--hhHHHHHHHHHHHcC---CCcchhhhheeee-----c
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRID--LTRPLLLELKRLKDL---HHDHLVKFIGACL-----D  134 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l---~h~ni~~l~~~~~-----~  134 (184)
                      |.+.+.++.|++|.+|.+.  .. ..+..||+|.++.....  ....+.+|+.+++.+   .||||+++++.+.     .
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           3 YECVAEIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             cceeeEeccCCCeEEEEEE--EcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            4555678889999999875  32 24678999998754321  233456677766655   7999999999875     2


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ....++++||++ |++.+++... ...+++..+..++.|+++||+..++
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~  128 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS  128 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456899999997 5899988753 3457899999999999999986553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.14  E-value=4.4e-10  Score=81.33  Aligned_cols=100  Identities=11%  Similarity=-0.040  Sum_probs=80.2

Q ss_pred             hcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHH
Q psy8884          75 IVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL  154 (184)
Q Consensus        75 ~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l  154 (184)
                      |..+.++...  +..+++.+|+|.++....     +..|...+....|||++++++.+...+..+++|||+++|+|.+++
T Consensus         4 g~~~~v~~~~--~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVM--DTRTQQTFILKGLRKSSE-----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEE--EccCCcEEEEEeecchhh-----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            4556677766  667889999999976532     234444555567999999999999999999999999999999999


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         155 ENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       155 ~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+.. .+++.....++.|+++||+..++
T Consensus        77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~  103 (237)
T cd05576          77 SKFL-NIPEECVKRWAAEMVVALDALHR  103 (237)
T ss_pred             HHhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            7644 58899999999999999986543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.14  E-value=8.8e-10  Score=78.51  Aligned_cols=112  Identities=27%  Similarity=0.289  Sum_probs=91.5

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecC
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      +...++.++.+.+|...  ....+..+++|.+...... ....+.+|+..+..++|+|++++++.+...+..++++|+++
T Consensus         3 ~~~~i~~g~~~~v~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        3 LGKKLGEGAFGKVYLAR--DKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             eeeEeecCCCeEEEEEE--EcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            34556777778888765  3335789999999876543 46678899999999999999999999988899999999999


Q ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|.+++......+++.....++.+++.+++..+
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  115 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH  115 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999765433788999999999999987543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.12  E-value=7.1e-10  Score=83.55  Aligned_cols=110  Identities=16%  Similarity=0.158  Sum_probs=85.2

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEEEEEeecCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCCLLTEYCPK  147 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~lv~e~~~~  147 (184)
                      ..++.|++|.||.+.......+..+|+|.++....  .....+|+.+++.++||||+++++.+..  ....++++||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            45788999999987633334567899999875432  3456789999999999999999998754  4568899999875


Q ss_pred             CCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENE--------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~--------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ++.+++...        ...+++.....++.||+.||+.+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~  126 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA  126 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh
Confidence             788887532        2247888899999999999986554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.12  E-value=7.5e-10  Score=85.13  Aligned_cols=114  Identities=12%  Similarity=0.047  Sum_probs=89.6

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|...+.++.|++|.+|.+.  ....++.||+|.+.....  .....+.+|+.+++.++|+|++++++.+...     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEE--ECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            3456677889999999998876  556788999999975422  2345678899999999999999999877543     


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ...|+||||+++ ++...+..   .+++.....++.|+++||+..++
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~  144 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS  144 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence             357999999976 67777753   36788889999999999996654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.11  E-value=7.4e-10  Score=82.99  Aligned_cols=117  Identities=21%  Similarity=0.190  Sum_probs=91.7

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--hhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|.....++.++.+.+|.+.  ...++..+|+|.+......  ....+.+|+.+++.++|+||+++++.+...     
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKAR--QIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEE--ECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence            4567777888999999999876  4456889999998754321  234567899999999999999999876543     


Q ss_pred             ---CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 ---PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ---~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                         ..+++++||+.+ ++...+......+++.....++.|+++||+..++
T Consensus        85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~  133 (311)
T cd07866          85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE  133 (311)
T ss_pred             ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence               346999999876 6777776555578999999999999999986543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0660|consensus

Probab=99.11  E-value=2e-10  Score=85.14  Aligned_cols=110  Identities=17%  Similarity=0.120  Sum_probs=90.2

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeec--cchhhhHHHHHHHHHHHcCCCcchhhhheeeec-----CCcEEEE
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKK--SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD-----PPHCCLL  141 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-----~~~~~lv  141 (184)
                      .+.+|.|++|.|+.+.  ...+|..||+|.+..  .+....+.-.+|+.+++.++|+||+.+...+..     -+.+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~--~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV  104 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAK--DKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV  104 (359)
T ss_pred             cccccCcceeeEEEEE--EcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence            4678889999888876  677889999999973  344446678899999999999999999887765     2579999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|+|+. +|...++.+. .++......++.|+++||.-.+|
T Consensus       105 ~elMet-DL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHS  143 (359)
T KOG0660|consen  105 FELMET-DLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHS  143 (359)
T ss_pred             hhHHhh-HHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhc
Confidence            999965 8999987654 58889999999999999985544

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.10  E-value=1.2e-09  Score=80.41  Aligned_cols=115  Identities=18%  Similarity=0.108  Sum_probs=87.3

Q ss_pred             cchhhhhhcccceeeecce-eeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC------cE
Q psy8884          68 KNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP------HC  138 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~------~~  138 (184)
                      +.+.++.|+++.+|.+... ...++..+|+|.++....  ...+.+.+|+.+++.++|||++++++.+...+      ..
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   82 (273)
T cd05074           3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP   82 (273)
T ss_pred             chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence            4466888999988887522 223578999999976432  23456889999999999999999999775432      34


Q ss_pred             EEEEeecCCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENE-----QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~-----~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++|+.+|++..++...     ...+++.....++.|++.||+.+++
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~  131 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS  131 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            7889999999999887532     1246888899999999999986554

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.09  E-value=9.4e-10  Score=82.80  Aligned_cols=110  Identities=16%  Similarity=0.168  Sum_probs=84.5

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEEEEEeecCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCCLLTEYCPK  147 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~lv~e~~~~  147 (184)
                      ..++.|++|.+|.+.......+..+|+|.++....  ...+.+|+.+++.++|||++++++.+..  ....++++||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            35788899999987633333567899999876432  3457789999999999999999998754  4678999999875


Q ss_pred             CCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         148 GSLQDILENE--------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       148 gsl~~~l~~~--------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ++.+++...        ...+++.....++.||+.||+..++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~  126 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA  126 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence             777777521        2247888899999999999986654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.09  E-value=6.5e-10  Score=85.18  Aligned_cols=114  Identities=13%  Similarity=0.058  Sum_probs=88.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|...+.++.|++|.+|.+.  ....++.+|+|.++....  .....+.+|+.+++.++|+||+++++.+...     
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEE--ecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3456667789999999998876  456788999999975422  2345677899999999999999999987543     


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       ...+++|||+++ ++...+..   .+++.....++.|+++||+.+++
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~  137 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS  137 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHh
Confidence             357999999976 56666643   47788888999999999986554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.08  E-value=9.2e-10  Score=81.70  Aligned_cols=114  Identities=18%  Similarity=0.127  Sum_probs=85.2

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC---CCcchhhhheeeec-----C
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL---HHDHLVKFIGACLD-----P  135 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~ni~~l~~~~~~-----~  135 (184)
                      |...+.++.|++|.+|.+.  ...+|+.||+|.++....  .......+|+.++..+   +|+||+++++.+..     .
T Consensus         2 y~~~~~lg~g~~g~v~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKAR--DPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             ceEeeEEeecCCeEEEEEE--ECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            3445667889999999876  556788999999975432  1223455676666554   79999999988754     2


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ...++++||+++ ++.+++... ...+++.....++.|++.||...++
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  126 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA  126 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            457999999985 888888753 3357899999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0690|consensus

Probab=99.08  E-value=1.3e-10  Score=85.68  Aligned_cols=120  Identities=18%  Similarity=0.055  Sum_probs=100.4

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....+.|++..+++.|.+|.|.+..  ...+++.+|+|.+++.-+-   ....-+.|-++++...||.+..+..+|+..+
T Consensus       164 kvTm~dFdfLKvLGkGTFGKVIL~r--EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  164 KVTMEDFDFLKVLGKGTFGKVILCR--EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD  241 (516)
T ss_pred             eeccchhhHHHHhcCCccceEEEEe--ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence            3467778888999999999999887  6678999999999987552   2334568889999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++||||+.||.|+-.|.+.+ .+++.....+-..|..||.-++|
T Consensus       242 rlCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs  286 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHS  286 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhh
Confidence            9999999999999999998765 45666666788889988886665

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.08  E-value=1.1e-09  Score=81.09  Aligned_cols=112  Identities=21%  Similarity=0.208  Sum_probs=85.2

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC---CCcchhhhheeeecCCc-----
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL---HHDHLVKFIGACLDPPH-----  137 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~ni~~l~~~~~~~~~-----  137 (184)
                      ..+.++.++.+.+|++.  ....+..+|+|.++....  .....+.+|+.++..+   .|+|++++.+.+...+.     
T Consensus         3 ~~~~l~~g~~~~v~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           3 ELAEIGEGAYGTVYKAR--DLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             EEEEecccCceEEEEEE--ECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            34567778888888876  334688999999975432  1233455677666554   69999999999987766     


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++++||+.+ ++.+++.... ..+++.+...++.|+++||+.+++
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~  125 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS  125 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999985 8988887643 358999999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.08  E-value=1.8e-09  Score=77.51  Aligned_cols=102  Identities=27%  Similarity=0.313  Sum_probs=84.4

Q ss_pred             ccceeeecceeeecCcEEEEeEeeccchhh-hHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHh
Q psy8884          77 KFNGYLKTKELLKEGNKVAIKNLKKSRIDL-TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE  155 (184)
Q Consensus        77 ~~~~~~~~~~~~~~g~~vavK~l~~~~~~~-~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~  155 (184)
                      .|.+|.+.  ...+|..+++|.+....... .+.+.+|+..++.++|+|++++.+.+......++++||+++++|.+++.
T Consensus         2 ~g~v~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        2 FGKVYLAR--DKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             ceEEEEEE--ECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            34566654  33357899999998765433 5678899999999999999999999998889999999999999999997


Q ss_pred             hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         156 NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       156 ~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ... .+++.....++.+++++++..+
T Consensus        80 ~~~-~~~~~~~~~~~~~l~~~l~~lh  104 (244)
T smart00220       80 KRG-RLSEDEARFYARQILSALEYLH  104 (244)
T ss_pred             hcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            654 3788999999999999998554

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.07  E-value=1.3e-09  Score=83.48  Aligned_cols=113  Identities=13%  Similarity=0.088  Sum_probs=88.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP------  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------  135 (184)
                      +.|...+.++.|+.+.++.+.  ...+|..||+|.++...  ......+.+|+.+++.++|+|++++++++...      
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAY--DTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEE--ECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            345666778889998888876  55678999999986532  22345677899999999999999999887643      


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ...|+++||+.+ ++.+.+...   ++......++.|++.||+.+++
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~  136 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHS  136 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHh
Confidence            357999999975 888887642   7888889999999999985543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.06  E-value=1.3e-09  Score=83.33  Aligned_cols=114  Identities=18%  Similarity=0.121  Sum_probs=88.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP------  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------  135 (184)
                      +.|...+.++.|+.|.+|.+.  ...+|..||+|.++....  .....+.+|+.++..++|+||+++.+.+...      
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   94 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEE--EcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence            456666778889999888875  456788999999975322  2245577899999999999999999887542      


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+++++++ +++|.+++...  .+++.....++.|+++||+..++
T Consensus        95 ~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  138 (345)
T cd07877          95 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS  138 (345)
T ss_pred             ccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467888876 67998887653  47889999999999999986553

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.06  E-value=1.2e-09  Score=83.37  Aligned_cols=113  Identities=19%  Similarity=0.124  Sum_probs=88.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCc-----
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH-----  137 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~-----  137 (184)
                      .|.....++.|+.+.+|.+.  ...++..||+|.+....  ......+.+|+.+++.+.|+|++++.+.+...+.     
T Consensus        16 ~y~~~~~ig~g~~g~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          16 RYQNLSPVGSGAYGQVCSAF--DTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             ceEEEEEeccCCceEEEEEE--ECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45566778888888888876  44568899999987532  2234557789999999999999999987765544     


Q ss_pred             -EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 -CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 -~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                       .++++||+ +++|.+++...  .+++.....++.|+++||+..++
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~  136 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHS  136 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence             89999998 56999988753  58899999999999999986543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0667|consensus

Probab=99.05  E-value=6.9e-10  Score=87.83  Aligned_cols=113  Identities=18%  Similarity=0.156  Sum_probs=94.1

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-C-----cchhhhheeeecCCcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-H-----DHLVKFIGACLDPPHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h-----~ni~~l~~~~~~~~~~  138 (184)
                      .|...++++.|.+|+|..+.  +..+++.||+|+++.... ....-..|+.++..++ |     -|+|+++++|...++.
T Consensus       187 rY~V~e~LGkGtFGQVvk~~--d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAY--DHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEecccccceeEEEE--ecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            35667899999999999987  677899999999997643 2344567888888875 3     3799999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||.|.+.. +|+++|+.+. .+++......++.||+.||..+.
T Consensus       264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~  306 (586)
T KOG0667|consen  264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH  306 (586)
T ss_pred             eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999887 8999999753 46888999999999999998653

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.04  E-value=1.7e-09  Score=80.32  Aligned_cols=114  Identities=13%  Similarity=0.054  Sum_probs=87.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+...+.++.|+.|.+|...  ...++..+|+|.+..... .....+..|+..+.++. |+|++++++.+..++..++++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKML--HKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEE--ECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            34445678888888888765  556788999999875432 33456788999999986 999999999998888999999


Q ss_pred             eecCCCCHHHHHh----hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILE----NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~----~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+.. ++.++..    .....+++.....++.|++.||+..+
T Consensus        83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh  124 (288)
T cd06616          83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK  124 (288)
T ss_pred             ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99875 5554332    12346889999999999999998654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0599|consensus

Probab=99.04  E-value=3.6e-10  Score=81.59  Aligned_cols=108  Identities=14%  Similarity=0.160  Sum_probs=85.2

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEE
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~  139 (184)
                      .++++.+....+-...  ...+|...|+|.+.....        ...++-.+|+.+++++ .||+|+++..++.++.+++
T Consensus        22 keilgrgvss~vrRci--~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~F   99 (411)
T KOG0599|consen   22 KEILGRGVSSVVRRCI--HKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVF   99 (411)
T ss_pred             HHHhcccchhhhhhhh--hcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhh
Confidence            3555555554444443  456788999999975321        2244567899999997 6999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhh
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      +|.|.|+.|.|+++|.+. ..+++.....||+|+.+|+..
T Consensus       100 lVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVey  138 (411)
T KOG0599|consen  100 LVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEY  138 (411)
T ss_pred             hhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHH
Confidence            999999999999999764 468899999999999999873

>KOG0666|consensus

Probab=99.03  E-value=1.9e-10  Score=84.29  Aligned_cols=118  Identities=14%  Similarity=0.117  Sum_probs=91.2

Q ss_pred             cccccchhhhhhcccceeeecceeee--cCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLK--EGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~  138 (184)
                      ..|+....++.|.+|.||+++.....  +.+.+|+|.++.+..  ....+..+|+.+++.++|+|++.+...+.. ...+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            34455566778888889988632222  244789999987633  335667899999999999999999988877 6789


Q ss_pred             EEEEeecCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENE----QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~----~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++++||.+. +|+..++-+    ...++......|+.||+.|++-+++
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~  150 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS  150 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh
Confidence            999999997 899998743    2457888999999999999985543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.01  E-value=5.9e-09  Score=73.05  Aligned_cols=107  Identities=33%  Similarity=0.343  Sum_probs=87.3

Q ss_pred             hhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHH
Q psy8884          73 HDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ  151 (184)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~  151 (184)
                      +.|..+.+|...  ....+..+++|.+...... ....+.+|+..++.+.|++++++++.+......++++|++++++|.
T Consensus         2 ~~g~~~~v~~~~--~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           2 GEGGFGTVYLAR--DKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CcCCceEEEEEE--ecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            456666777664  2234889999999876542 2456889999999999999999999998888999999999999999


Q ss_pred             HHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         152 DILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       152 ~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++......+++..+..++.+++++++..+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  109 (215)
T cd00180          80 DLLKENEGKLSEDEILRILLQILEGLEYLH  109 (215)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999875345789999999999999998554

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1151|consensus

Probab=98.99  E-value=1.1e-09  Score=84.02  Aligned_cols=112  Identities=19%  Similarity=0.171  Sum_probs=92.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hh----hHHHHHHHHHHHcCCCcchhhhheeee-cC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DL----TRPLLLELKRLKDLHHDHLVKFIGACL-DP  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~----~~~~~~e~~~l~~l~h~ni~~l~~~~~-~~  135 (184)
                      +.|.+..+++.||+..||++.  +++..+.||+|.-.....   +.    .+...+|..+.+.++||.||+++.++. +.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAF--Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAF--DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhc--ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            345667889999999999988  788889999998754322   11    223568999999999999999999875 56


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +.++-|.|||+|.+|.-||+.+. .+++.....|+.||..||.
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~  582 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALK  582 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHH
Confidence            78899999999999999998766 6889999999999999997

>KOG1152|consensus

Probab=98.96  E-value=2.9e-09  Score=83.81  Aligned_cols=115  Identities=17%  Similarity=0.091  Sum_probs=92.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh--------hHHHHHHHHHHHcCC---Ccchhhhheeee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL--------TRPLLLELKRLKDLH---HDHLVKFIGACL  133 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~--------~~~~~~e~~~l~~l~---h~ni~~l~~~~~  133 (184)
                      .|+...-++.|++|.|.+++  ...+...|++|.+.++.+..        ....-.|+.+|..++   |+||++++.+|+
T Consensus       562 ~yttlq~lG~GAyGkV~lai--~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAI--HKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             cceeeeeccccccceEEEee--ecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            35555668899999999987  44557799999998876532        122457999999997   999999999999


Q ss_pred             cCCcEEEEEee-cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 DPPHCCLLTEY-CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~~~~~~lv~e~-~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+..|++||- -++-+|++++..+. .+++....-|..||+-|++.+++
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~  688 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHD  688 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccc
Confidence            99999999995 45668999997654 68899999999999999986653

>KOG0658|consensus

Probab=98.96  E-value=4.5e-10  Score=83.51  Aligned_cols=109  Identities=16%  Similarity=0.114  Sum_probs=84.2

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC--C---cEEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--P---HCCLL  141 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--~---~~~lv  141 (184)
                      .-.++++.|.+|.||.+.  ...+++.||+|..-.....    -.+|+.+|+.++|||||++.-+|...  +   ...+|
T Consensus        27 ~~~~liG~GsFg~Vyq~~--~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   27 EAVRLIGSGSFGVVYQAK--LRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EeeEEEeecccceEEEEE--EcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            344678889999999886  4556889999998765331    24799999999999999998877642  2   34489


Q ss_pred             EeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||++. +|.++++.   .+..++.....-++.||++||+-+++
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence            999998 89999984   24567777778899999999995443

>KOG0192|consensus

Probab=98.96  E-value=5.5e-10  Score=85.35  Aligned_cols=89  Identities=35%  Similarity=0.583  Sum_probs=72.3

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCC-ceeEEeeecCCCchhhhhhhc-ccCccccccchhhhhhcccceeeeccee
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~-~~~~~~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      -|.+ |+.+|.+++|+|||+|.|+|.+++ .+++|+||+++|++.+.++.. ...++......+....+.|..|+|.   
T Consensus        85 ~f~~-E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---  160 (362)
T KOG0192|consen   85 AFRR-EASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---  160 (362)
T ss_pred             HHHH-HHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---
Confidence            4555 999999999999999999999988 799999999999999999883 4456655656677778888888875   


Q ss_pred             eecCcEEEEeEeeccchh
Q psy8884          88 LKEGNKVAIKNLKKSRID  105 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~~  105 (184)
                        .+. +++..+++.+..
T Consensus       161 --~~~-iIHrDLK~~NiL  175 (362)
T KOG0192|consen  161 --EGP-IIHRDLKSDNIL  175 (362)
T ss_pred             --CCC-eeecccChhhEE
Confidence              112 788888877664

>KOG0604|consensus

Probab=98.95  E-value=5.2e-10  Score=81.60  Aligned_cols=111  Identities=14%  Similarity=0.061  Sum_probs=85.1

Q ss_pred             cccccc-hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHH-HcCCCcchhhhheeeec----CCc
Q psy8884          64 EPMFKN-SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRL-KDLHHDHLVKFIGACLD----PPH  137 (184)
Q Consensus        64 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l-~~l~h~ni~~l~~~~~~----~~~  137 (184)
                      +.|.+. ..++.|.+|.|....  ...+++++|+|++..+     ..-.+|+++. ....|+|||.++..|..    ...
T Consensus        61 edY~is~qvLG~GinGkV~~C~--~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCV--HKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             hhheehhhhhccccCCceEEEE--eccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            334433 567778788777666  5668889999998754     3346777764 44579999998887654    456


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +.+|||+|+||+|+..+.+.+ ..+++.+.-.|++||+.|+.-++
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH  178 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH  178 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999998754 46899999999999999998544

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.94  E-value=9.7e-09  Score=77.99  Aligned_cols=114  Identities=17%  Similarity=0.056  Sum_probs=84.8

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC-CCcchhhhheeeec----CCcE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL-HHDHLVKFIGACLD----PPHC  138 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~----~~~~  138 (184)
                      |.+.+.++.|+++.+|.+.......+..+|+|.++....  ...+.+.+|+.++..+ .|+||+++++.+..    ....
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            345567788888888887632212277999999875321  2245678899999998 59999999886432    2457


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++++|+. ++|.+++.... .+++.....++.||+.||...+
T Consensus        82 ~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  122 (332)
T cd07857          82 YLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH  122 (332)
T ss_pred             EEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            89999887 58999886543 6789999999999999998554

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PTZ00284 protein kinase; Provisional

Probab=98.93  E-value=6.8e-09  Score=82.48  Aligned_cols=114  Identities=12%  Similarity=0.033  Sum_probs=84.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC------cchhhhheeeecC-C
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH------DHLVKFIGACLDP-P  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h------~ni~~l~~~~~~~-~  136 (184)
                      ..|.+.+.++.|++|.||++.  ....++.||+|.++.... .......|+.++..+.|      .+++.+..++... .
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~--~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAW--DRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEE--EcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            456777789999999999876  556788999999975321 12334556666665544      4577777777654 5


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|+++ +++|.+++.+.+ .+++..+..++.||+.||+.+++
T Consensus       206 ~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~  249 (467)
T PTZ00284        206 HMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHT  249 (467)
T ss_pred             eEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            688999987 668998887654 58899999999999999987664

>KOG4645|consensus

Probab=98.93  E-value=2.9e-10  Score=96.13  Aligned_cols=108  Identities=21%  Similarity=0.321  Sum_probs=91.6

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ....++.|.+|.||.++  ...+|...|+|.++-...  .....+..|..++..++|||+|+.+|.-...+.++|.||||
T Consensus      1239 rg~~Ig~G~fG~VYtav--N~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAV--NLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             cccccCCcceeeeEEee--cCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            44678888899999988  778899999999875543  23445678999999999999999999988899999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      .+|+|.+++...+ -.++.....+..|++.|++
T Consensus      1317 ~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla 1348 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLA 1348 (1509)
T ss_pred             ccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHH
Confidence            9999999998654 4677777888999999998

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.92  E-value=8.3e-09  Score=78.72  Aligned_cols=112  Identities=17%  Similarity=0.129  Sum_probs=85.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC------C
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP------P  136 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------~  136 (184)
                      .|.....++.|++|.+|.+.  ...+|..||+|.++....  .....+.+|+.+++.+.|+|++++.+++...      .
T Consensus        16 ~y~~~~~ig~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          16 RYTSLKQVGSGAYGSVCSAI--DKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ceEEEEEeeecCCeEEEEEE--eCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            45556778888888888876  456789999999875321  2234578899999999999999999987654      2


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++||+.. ++..++.   ..+++.....++.|+++||+..++
T Consensus        94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~  135 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHS  135 (342)
T ss_pred             eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46899999875 6666552   257888899999999999986543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.86  E-value=2.7e-08  Score=79.30  Aligned_cols=124  Identities=9%  Similarity=0.063  Sum_probs=84.5

Q ss_pred             cccCccccccchhhhhhcccceeeecce--------------eeecCcEEEEeEeeccchhhhHH--------------H
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKE--------------LLKEGNKVAIKNLKKSRIDLTRP--------------L  110 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~g~~vavK~l~~~~~~~~~~--------------~  110 (184)
                      ..+..+.|...+.+++|++|.||.+...              ....++.||+|.++.......++              .
T Consensus       140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~  219 (507)
T PLN03224        140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG  219 (507)
T ss_pred             CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence            3456778888899999999999986420              11345689999987543222222              3


Q ss_pred             HHHHHHHHcCCCcch-----hhhheeeec--------CCcEEEEEeecCCCCHHHHHhhcC-------------------
Q psy8884         111 LLELKRLKDLHHDHL-----VKFIGACLD--------PPHCCLLTEYCPKGSLQDILENEQ-------------------  158 (184)
Q Consensus       111 ~~e~~~l~~l~h~ni-----~~l~~~~~~--------~~~~~lv~e~~~~gsl~~~l~~~~-------------------  158 (184)
                      ..|+..+..+.|.++     +++.++|..        .+..++|+||+++|+|.+++....                   
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~  299 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD  299 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence            346666666666543     566666542        346899999999999999886421                   


Q ss_pred             ----CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         159 ----FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       159 ----~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                          ..+++..+..++.|+++||+..++
T Consensus       300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~  327 (507)
T PLN03224        300 NMPQDKRDINVIKGVMRQVLTGLRKLHR  327 (507)
T ss_pred             hcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence                123566788899999999985543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.85  E-value=1.3e-08  Score=71.33  Aligned_cols=105  Identities=17%  Similarity=0.019  Sum_probs=72.6

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhh---------hH-----------------HHHHHHHHHHcCCCc
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL---------TR-----------------PLLLELKRLKDLHHD  123 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~---------~~-----------------~~~~e~~~l~~l~h~  123 (184)
                      ..++.|+.+.+|.+.  .. +|+.||+|+++......         ..                 ....|...+..+.++
T Consensus         3 ~~ig~G~~~~Vy~a~--~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05147           3 GCISTGKEANVYHAT--TA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA   79 (190)
T ss_pred             CccccccceEEEEEE--CC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence            567889999999986  32 79999999998653210         01                 123488888888777


Q ss_pred             chhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         124 HLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       124 ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ++...... ...+ .++||||++++++....... ..++......++.|++.+|+..
T Consensus        80 ~v~~p~~~-~~~~-~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l  133 (190)
T cd05147          80 GIPCPEPI-LLKS-HVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRIL  133 (190)
T ss_pred             CCCCCcEE-EecC-CEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHH
Confidence            65332222 1122 38999999998776553332 3578888999999999999854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.85  E-value=1.5e-08  Score=77.68  Aligned_cols=107  Identities=10%  Similarity=-0.064  Sum_probs=75.7

Q ss_pred             ccccccchhhhhhcccceeeecceeee-cCcEEEEeEeeccc-----hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLK-EGNKVAIKNLKKSR-----IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      .+.|.+.+.++.|++|.||.+.  ... .+..+|+|.+....     ......+.+|+.++..+.|+|+++.+..   .+
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~--~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGY--FAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEE--EcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            3457778889999999999875  222 56778999875331     1224568899999999999999853322   24


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..|++|||+++++|.. +..    ..   ...++.|+++||+..|+
T Consensus        92 ~~~LVmE~~~G~~L~~-~~~----~~---~~~~~~~i~~aL~~lH~  129 (365)
T PRK09188         92 KDGLVRGWTEGVPLHL-ARP----HG---DPAWFRSAHRALRDLHR  129 (365)
T ss_pred             CcEEEEEccCCCCHHH-hCc----cc---hHHHHHHHHHHHHHHHH
Confidence            5799999999999863 211    11   13577889999886554

>KOG0595|consensus

Probab=98.84  E-value=1.8e-09  Score=81.43  Aligned_cols=83  Identities=24%  Similarity=0.457  Sum_probs=67.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|+++|++++|+|||.++.++.+++.+++|||||.+|++.+++++.. .++.-....++...+.+..+++.       +.
T Consensus        58 ~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~-------~~  129 (429)
T KOG0595|consen   58 SEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHE-------NN  129 (429)
T ss_pred             HHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-------CC
Confidence            49999999999999999999999999999999999999999999865 44444455666666666656543       56


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      +.++.+|++++
T Consensus       130 IiHRDLKPQNi  140 (429)
T KOG0595|consen  130 IIHRDLKPQNI  140 (429)
T ss_pred             eeeccCCcceE
Confidence            77777877765

>KOG0197|consensus

Probab=98.80  E-value=2.1e-09  Score=83.26  Aligned_cols=76  Identities=32%  Similarity=0.440  Sum_probs=62.5

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh-cccCccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN-EQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.|.+ |..+|++|.|+|+|+++|+|......++|+||+++|+|.++|.. ....++.-.+..+......|+.|+..
T Consensus       245 ~~~f~~-Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes  321 (468)
T KOG0197|consen  245 PEAFLR-EAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES  321 (468)
T ss_pred             hhHHHH-HHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence            467777 99999999999999999999998889999999999999999987 33344444555666677777777764

>KOG1035|consensus

Probab=98.78  E-value=9.4e-09  Score=86.79  Aligned_cols=66  Identities=21%  Similarity=0.153  Sum_probs=53.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhhee
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGA  131 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~  131 (184)
                      ..|...+++|.||+|.|++..  ....|..+|+|.+.... ........+|+.++++++|||||+++..
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVR--NKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysA  545 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVR--NKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSA  545 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEe--ecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehh
Confidence            345556789999999999987  78889999999997653 2334567899999999999999988764

>PRK10345 hypothetical protein; Provisional

Probab=98.76  E-value=6.9e-08  Score=68.64  Aligned_cols=100  Identities=13%  Similarity=0.136  Sum_probs=72.9

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-----CCcchhhhheeeecCC---cEE-
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-----HHDHLVKFIGACLDPP---HCC-  139 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~l~~~~~~~~---~~~-  139 (184)
                      ...++.|+.+.||.+.    ..+.. ++|.+..........+.+|+..++.+     .||||++++|++.++.   .++ 
T Consensus         7 ~~~LG~G~~~~Vy~hp----~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          7 QSPLGTGRHRKCYAHP----EDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cceecCCCceEEEECC----CCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            3668888888888532    33444 68888765443456789999999999     6799999999998763   334 


Q ss_pred             EEEee--cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHh
Q psy8884         140 LLTEY--CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNR  177 (184)
Q Consensus       140 lv~e~--~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl  177 (184)
                      +++||  +.+|+|.+++++..  +++.  ..++.|++.++
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l  117 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKL  117 (210)
T ss_pred             EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHH
Confidence            78999  66899999997643  4554  34567777666

>KOG0986|consensus

Probab=98.76  E-value=4.3e-09  Score=80.72  Aligned_cols=120  Identities=14%  Similarity=0.015  Sum_probs=100.0

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh---hHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL---TRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~---~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...++|....+++.|++|.|+-.+  ...+|+.+|.|.+....+..   ..-.++|-.++..++.+.||.+...|.+.+.
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acq--vraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQ--VRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             ccccceeeeEEEecccccceeEEE--EecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            355667777889999999999887  56789999999997655422   2335688889999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|+..|.||+|.-.|.+.+ ..+++.....++.+|+.||.-+++
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~  305 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR  305 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh
Confidence            999999999999999887653 578999999999999999985443

>KOG0696|consensus

Probab=98.71  E-value=6.5e-09  Score=79.14  Aligned_cols=117  Identities=15%  Similarity=0.008  Sum_probs=91.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcC-CCcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~  138 (184)
                      ...|.+...++.|.+|.+.++.  ...+.+.+|+|+++..-+-   ..+--..|-+++... +.|.+++++.++.+-+.+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLae--rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL  425 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAE--RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL  425 (683)
T ss_pred             ecccceEEEeccCccceeeeec--ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence            3445666778889999888876  3445678999999876541   222234566677666 467889999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+||||+.||+|.-.+..-+ .+.+.....++..||-||.++++
T Consensus       426 yFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~  468 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHS  468 (683)
T ss_pred             eeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhc
Confidence            99999999999999988755 56778888899999999988765

>KOG1027|consensus

Probab=98.70  E-value=1.7e-08  Score=82.26  Aligned_cols=107  Identities=19%  Similarity=0.199  Sum_probs=79.5

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecC
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      -.++++.|..|.+   +++|.|.|+.||||.+-.+...   -..+|+..++.. .||||+++++.-.+.++.|++.|.|.
T Consensus       513 ~~eilG~Gs~Gt~---Vf~G~ye~R~VAVKrll~e~~~---~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  513 PKEILGYGSNGTV---VFRGVYEGREVAVKRLLEEFFD---FAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             cHHHcccCCCCcE---EEEEeeCCceehHHHHhhHhHH---HHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            3455555555542   2347899999999998765432   346899999988 59999999998888999999999998


Q ss_pred             CCCHHHHHhhcC--CCC-CHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENEQ--FKL-EPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~~--~~l-~~~~~~~i~~qi~~gl~~~~  181 (184)
                      . +|.+++....  ... .-.....++.|+++|||-++
T Consensus       587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH  623 (903)
T KOG1027|consen  587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH  623 (903)
T ss_pred             h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH
Confidence            7 9999998741  111 11344678899999999544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.69  E-value=1.5e-07  Score=66.07  Aligned_cols=105  Identities=17%  Similarity=0.089  Sum_probs=72.8

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhh--------------------------hHHHHHHHHHHHcCCCc
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL--------------------------TRPLLLELKRLKDLHHD  123 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~--------------------------~~~~~~e~~~l~~l~h~  123 (184)
                      ..++.|+.+.+|.+.  .. +|+.||+|.++......                          ...+..|...+..+.|+
T Consensus         3 ~~ig~G~~~~Vy~a~--~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           3 GCISTGKEANVYHAR--TG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             ceeecCCCcEEEEEE--cC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            467889999999886  33 79999999998652110                          11235688888888888


Q ss_pred             chhhhheeeecCCcEEEEEeecCCCCHHHH-HhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         124 HLVKFIGACLDPPHCCLLTEYCPKGSLQDI-LENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       124 ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~-l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++.........  ..+++|||++++++... +..  ..++......++.|++.++...+
T Consensus        80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH  134 (190)
T cd05145          80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY  134 (190)
T ss_pred             CCCCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH
Confidence            86443332222  24899999999865443 433  24677888899999999987554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG4721|consensus

Probab=98.68  E-value=6.5e-09  Score=81.97  Aligned_cols=72  Identities=24%  Similarity=0.516  Sum_probs=57.6

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTK   85 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
                      .+.++-|++|+|+||..|.|+|...+-.||+||||+.|.|..+|...+.-...+ +.......+.|+.|++..
T Consensus       160 ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~l-lv~Wsk~IA~GM~YLH~h  231 (904)
T KOG4721|consen  160 ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSL-LVDWSKGIAGGMNYLHLH  231 (904)
T ss_pred             hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHH-HHHHHHHhhhhhHHHHHh
Confidence            346777999999999999999999999999999999999999998766433332 234456677788888763

>KOG0669|consensus

Probab=98.68  E-value=3.6e-09  Score=75.69  Aligned_cols=111  Identities=19%  Similarity=0.226  Sum_probs=88.1

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeec--------CCc
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLD--------PPH  137 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--------~~~  137 (184)
                      ....++.|.+|.||++.  ....|++||+|..--.+  ......-.+|+.++..+.|+|++.+++.|..        ...
T Consensus        21 k~~kigqGtfgeVFkAr--~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFKAR--SKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHhcCCchHHHHHHHh--hcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            33567788888899887  56678889987764332  2234456899999999999999999988764        235


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|+++|+. +|..+|.+....++...+.+++.++.+||-..+
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH  141 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH  141 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence            8999999997 899999887778899999999999999987443

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.67  E-value=5.3e-08  Score=78.12  Aligned_cols=116  Identities=10%  Similarity=-0.004  Sum_probs=79.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEe------------------EeeccchhhhHHHHHHHHHHHcCCCcch
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIK------------------NLKKSRIDLTRPLLLELKRLKDLHHDHL  125 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK------------------~l~~~~~~~~~~~~~e~~~l~~l~h~ni  125 (184)
                      ..|.+...++.|++|.||++..+. ..+...+.|                  .++.. ......+.+|+.+++.++|+||
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRA-STEEAEARRGVNSTNQGKPKCERLIAKRVKAG-SRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEec-cchhhhhhhccccccccchhhhhhHhHHhhcc-hHHHHHHHHHHHHHHhCCCCCc
Confidence            456777888999999999764211 111111111                  11111 1224457899999999999999


Q ss_pred             hhhheeeecCCcEEEEEeecCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         126 VKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ----FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       126 ~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~----~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++++...+..|++++++.+ ++.+++....    ......+...++.|++.||..+++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~  285 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD  285 (501)
T ss_pred             CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999864 7777775432    122345567899999999986543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.65  E-value=1.8e-07  Score=66.47  Aligned_cols=102  Identities=16%  Similarity=0.050  Sum_probs=76.7

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchh--------hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .++.|+.+.+|.+.    +.|..+++|...+....        ....+.+|+..+..+.|+++......+...+..+++|
T Consensus         3 ~l~~G~~~~vy~~~----~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          3 LIKRGAEAEIYLGD----FLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             ccccCceEEEEEEe----eCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence            45778888888754    57889999987643211        1235778999999999998877666666677789999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|++|.+.+....    + ....++.+++.+|+..+
T Consensus        79 e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH  112 (211)
T PRK14879         79 EYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLH  112 (211)
T ss_pred             EEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH
Confidence            9999999999986532    2 67788899998887544

>KOG0614|consensus

Probab=98.60  E-value=9e-09  Score=80.11  Aligned_cols=116  Identities=18%  Similarity=0.113  Sum_probs=93.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcE--EEEeEeeccchh---hhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK--VAIKNLKKSRID---LTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      .+..+.....++.|++|.|-+..    .+++.  +|+|++++..+.   ..+....|-.+|.+++.+.|++++-+|.+..
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~----~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k  493 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVK----VNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK  493 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEE----ecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence            44555566678888888877754    34444  799999876652   2345778999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+|+.||-|-||.++..|++.+ .++......++..+.+|++-+++
T Consensus       494 yvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~  538 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHR  538 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHh
Confidence            9999999999999999998866 57777778888889999885543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.57  E-value=2.8e-07  Score=64.88  Aligned_cols=99  Identities=16%  Similarity=0.056  Sum_probs=70.2

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ++.|+.+.+|.+.    +.|..+++|.......        .....+.+|+.++..+.|+++......+...+..+++||
T Consensus         2 ig~G~~~~vy~~~----~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         2 IAKGAEAIIYLGD----FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCceEEEEEee----cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence            5667778888764    6778999998654321        112456789999999988775544444455666799999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++++++.+.+.....        .++.+++.+|+..++
T Consensus        78 ~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~  108 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND--------ELLREIGRLVGKLHK  108 (199)
T ss_pred             EECCccHHHHHhhcHH--------HHHHHHHHHHHHHHH
Confidence            9999999998754321        678888888875443

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0695|consensus

Probab=98.52  E-value=8.8e-08  Score=71.36  Aligned_cols=118  Identities=14%  Similarity=0.072  Sum_probs=89.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      .+..|.+...++.|.+..+.+..  ...+.+.+|+|++++.-.   +....+..|-.+..+. +||.++-++.++.+...
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~--~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVR--LKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccceeeeeecCcchhhhhhee--hcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            34445555666666665555554  456788999999987643   2344556666666554 79999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|.||++||+|.-.+.+.+ .++++....+...|+-||..+++
T Consensus       326 lffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~  369 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHE  369 (593)
T ss_pred             EEEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhh
Confidence            999999999999998887665 57888888888999999887654

>KOG1026|consensus

Probab=98.52  E-value=3.2e-08  Score=80.75  Aligned_cols=77  Identities=26%  Similarity=0.422  Sum_probs=61.4

Q ss_pred             CcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccC-------------ccccccchhhh
Q psy8884           7 GRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFK-------------LEPMFKNSLMH   73 (184)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~-------------~~~~~~~~~~~   73 (184)
                      .+.-|-| |.+.+..+.|+|||+|+|+|.+++..+++.|||..|+|.++|.-..+.             +....+..+..
T Consensus       532 ~~~dF~R-EaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~  610 (774)
T KOG1026|consen  532 ARQDFRR-EAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIAT  610 (774)
T ss_pred             HHHHHHH-HHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHH
Confidence            3556777 999999999999999999999999999999999999999988743221             33334455666


Q ss_pred             hhcccceeeec
Q psy8884          74 DIVKFNGYLKT   84 (184)
Q Consensus        74 ~~~~~~~~~~~   84 (184)
                      ..+.|+.|+..
T Consensus       611 QIAaGM~YLs~  621 (774)
T KOG1026|consen  611 QIAAGMEYLSS  621 (774)
T ss_pred             HHHHHHHHHHh
Confidence            77788888764

>KOG0194|consensus

Probab=98.47  E-value=9.4e-08  Score=74.99  Aligned_cols=70  Identities=26%  Similarity=0.388  Sum_probs=58.0

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      |-.+|.++.|+|+|+++|++....+.++++|+|++|+|.++|....-.+............+.|..|++.
T Consensus       211 EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~  280 (474)
T KOG0194|consen  211 EARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS  280 (474)
T ss_pred             HHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence            7888999999999999999999999999999999999999998765445555555566666666767664

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.43  E-value=1.8e-06  Score=62.05  Aligned_cols=86  Identities=13%  Similarity=0.064  Sum_probs=64.5

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhh---HH------HHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLT---RP------LLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~---~~------~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .+....+++.++++.+++..   . .+..+|+|.+++......   ..      +.+|+..+.++.|+++......+...
T Consensus        32 ~y~~~~~l~~~~f~~v~l~~---~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         32 NIKTIKVFRNIDDTKVSLID---T-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             ceEEEEEecCCCceEEEEEe---c-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            45566778889999999753   2 577899999986543221   12      57898899999999998887664432


Q ss_pred             --------CcEEEEEeecCCCCHHHHH
Q psy8884         136 --------PHCCLLTEYCPKGSLQDIL  154 (184)
Q Consensus       136 --------~~~~lv~e~~~~gsl~~~l  154 (184)
                              +..+++|||++|.+|.+..
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhh
Confidence                    3578999999999998863

>KOG1290|consensus

Probab=98.40  E-value=1.2e-06  Score=68.05  Aligned_cols=117  Identities=15%  Similarity=0.075  Sum_probs=88.5

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-----Cc---chhhhheee
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-----HD---HLVKFIGAC  132 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----h~---ni~~l~~~~  132 (184)
                      |.-..|....-++.|.+..||++-  +....+.||+|+.+....- .+.-.-|+.++++++     |+   .||+|+..|
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLaw--Dtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F  151 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAW--DTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF  151 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEe--eccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence            333456666778888888888876  6778889999999975432 455678888888762     33   478888877


Q ss_pred             ec----CCcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         133 LD----PPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       133 ~~----~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .-    +.++++|+|++.. +|..+|... ...++.....+|++||+.||.-++
T Consensus       152 khsGpNG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH  204 (590)
T KOG1290|consen  152 KHSGPNGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLH  204 (590)
T ss_pred             eecCCCCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            53    5689999998754 788888754 567899999999999999998554

>KOG0611|consensus

Probab=98.40  E-value=7.9e-08  Score=73.25  Aligned_cols=86  Identities=20%  Similarity=0.329  Sum_probs=62.4

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeec
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      -.|.|+++|+.|+|+||..+.-++...+...++|||..+|.+.|++..... +..-.-..+.........|.+.      
T Consensus        99 hIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHk------  171 (668)
T KOG0611|consen   99 HIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHK------  171 (668)
T ss_pred             HHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhh------
Confidence            457799999999999999999999999999999999999999999886542 2222222333333333334432      


Q ss_pred             CcEEEEeEeeccch
Q psy8884          91 GNKVAIKNLKKSRI  104 (184)
Q Consensus        91 g~~vavK~l~~~~~  104 (184)
                       ..|+++.++..++
T Consensus       172 -nrVvHRDLKLENI  184 (668)
T KOG0611|consen  172 -NRVVHRDLKLENI  184 (668)
T ss_pred             -ccceecccchhhe
Confidence             4677777776665

>KOG0668|consensus

Probab=98.39  E-value=4.4e-07  Score=64.35  Aligned_cols=108  Identities=15%  Similarity=0.129  Sum_probs=82.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecC--CcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDP--PHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~--~~~~l  140 (184)
                      +.+.+...++.|....+|-+.  ...++.++++|.+++-.   .....+|+.++..+. ||||++++....++  ....+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~--~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGI--NITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             chHHHHHHHcCccHhhHhccc--ccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            445555556666666677655  56788899999999865   345779999999996 99999999988775  45679


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +.||+.+-+...+..    .++...+..++.++++||..-
T Consensus       113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyC  148 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYC  148 (338)
T ss_pred             HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHH
Confidence            999999987666543    356667778889999998743

>KOG1345|consensus

Probab=98.38  E-value=9.6e-07  Score=64.11  Aligned_cols=114  Identities=11%  Similarity=0.121  Sum_probs=88.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhhe-eeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIG-ACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~-~~~~~~~~~lv  141 (184)
                      +.|.+...+++|.+|...++.  +..+...+++|.+..... ...+|.+|..---.+ .|.||+.-+. .|++.+...++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~e--Hr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAE--HRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhHHHHhcccceeeEEeee--ccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            456777888889888888776  566778999999876432 256788887655555 5889887664 56777888899


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||++.|+|.+-+...  ++.+.....++.|++.|+..-+|
T Consensus       101 qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMHs  139 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMHS  139 (378)
T ss_pred             eccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhhc
Confidence            9999999998877553  47788889999999999986554

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.38  E-value=2.8e-06  Score=68.84  Aligned_cols=102  Identities=17%  Similarity=0.062  Sum_probs=73.1

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccc--h------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--I------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.++.|+++.+|++.    +.+..+++|......  .      .....+.+|+.++..++|++++.....+...+..+
T Consensus       337 ~~~~iG~G~~g~Vy~~~----~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        337 PDHLIGKGAEADIKKGE----YLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             ccceeccCCcEEEEEEe----ecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            34677888888888753    445555555432211  1      11345789999999999999887766666667789


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++++|.+++.         ....++.|++++|+..++
T Consensus       413 lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~  446 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHK  446 (535)
T ss_pred             EEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHh
Confidence            9999999999999875         245688889988885543

>KOG1006|consensus

Probab=98.35  E-value=4.7e-07  Score=65.51  Aligned_cols=113  Identities=15%  Similarity=0.184  Sum_probs=77.9

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~  138 (184)
                      |..+.+.-.+.++.|.+|.|.+-.  ....|+..|||.++..+. ...+.++.|.....+ -+-||||+++|.+-.....
T Consensus        61 F~~~~Lqdlg~iG~G~fG~V~KM~--hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc  138 (361)
T KOG1006|consen   61 FTSDNLQDLGEIGNGAFGTVNKML--HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC  138 (361)
T ss_pred             cccchHHHHHHhcCCcchhhhhhh--cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence            334444444667778888877755  667899999999998776 335568888876554 5789999999999888899


Q ss_pred             EEEEeecCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHH
Q psy8884         139 CLLTEYCPKGSLQDILEN----EQFKLEPMFKNSLMNKAAFN  176 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~----~~~~l~~~~~~~i~~qi~~g  176 (184)
                      |+.||.|+- |+..+.+.    ....+++.-+-+|......|
T Consensus       139 WiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~A  179 (361)
T KOG1006|consen  139 WICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDA  179 (361)
T ss_pred             eeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhH
Confidence            999999986 66655542    12345555443443333333

>KOG1094|consensus

Probab=98.29  E-value=6.9e-08  Score=76.41  Aligned_cols=76  Identities=26%  Similarity=0.501  Sum_probs=59.4

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCc-cccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKL-EPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      +..|.+ |+.+|.+|+||||+++.|+|...+..++++||+.+|.+.++|...+... +......+....+.|..|+..
T Consensus       579 r~~F~k-EIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes  655 (807)
T KOG1094|consen  579 RNDFLK-EIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES  655 (807)
T ss_pred             HHHHHH-HHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence            566777 9999999999999999999999999999999999999999988764332 333333455556666666543

>KOG1095|consensus

Probab=98.28  E-value=3.1e-07  Score=77.61  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=64.4

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc------ccCccccccchhhhhhccccee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE------QFKLEPMFKNSLMHDIVKFNGY   81 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~   81 (184)
                      ...|.+ |-.+|+++.|+|+++++|+|.+....++++|||.+|+|..+++..      ...+...++..+....+.|+.|
T Consensus       739 ~~~Fl~-Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~Y  817 (1025)
T KOG1095|consen  739 VSDFLK-EALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNY  817 (1025)
T ss_pred             HHHHHH-HHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHH
Confidence            445777 888999999999999999999999999999999999999999987      4555556666777778888888


Q ss_pred             eec
Q psy8884          82 LKT   84 (184)
Q Consensus        82 ~~~   84 (184)
                      +..
T Consensus       818 Le~  820 (1025)
T KOG1095|consen  818 LES  820 (1025)
T ss_pred             HHh
Confidence            765

>KOG0193|consensus

Probab=98.27  E-value=2e-07  Score=73.90  Aligned_cols=74  Identities=27%  Similarity=0.529  Sum_probs=63.7

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      +.|. +|+.++++.+|.||+-|+|+|..++. ++++.+|.+.+|...++-.+-.++......+......|+.|++.
T Consensus       433 qaFK-nEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA  506 (678)
T KOG0193|consen  433 QAFK-NEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA  506 (678)
T ss_pred             HHHH-HHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence            3444 49999999999999999999999886 99999999999999999776566666677788888999999886

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.23  E-value=8.4e-06  Score=66.41  Aligned_cols=118  Identities=14%  Similarity=0.164  Sum_probs=74.8

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeec----CcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhhee---
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE----GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGA---  131 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~---  131 (184)
                      ..+..+.|.+...++.|++|.||++.  ...+    +..||+|.+.....  .+.+..+  .+....+.++..+...   
T Consensus       127 ~~~~~~~y~l~~~LG~G~FG~VYka~--~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        127 PSFKKDDFVLGKKLGEGAFGVVYKAS--LVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLE  200 (566)
T ss_pred             CCCccCCeEEeEEEeeCCCeEEEEEE--EcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence            34466778888899999999999986  3344    78999998865322  1111111  1222223333322221   


Q ss_pred             ---eecCCcEEEEEeecCCCCHHHHHhhcCCC-------------------CCHHHHHHHHHHHHHHhhhccC
Q psy8884         132 ---CLDPPHCCLLTEYCPKGSLQDILENEQFK-------------------LEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       132 ---~~~~~~~~lv~e~~~~gsl~~~l~~~~~~-------------------l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                         ....+..++++||+.+|+|.+++......                   ........++.|++.||+-.++
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~  273 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS  273 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence               23456789999999999999998754211                   1123455789999999985554

>KOG0615|consensus

Probab=98.23  E-value=7e-07  Score=68.01  Aligned_cols=51  Identities=24%  Similarity=0.281  Sum_probs=45.7

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .++++|+++|++|+|||||++.+++.++...++|+||+.+|.+.+.+-...
T Consensus       221 ~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk  271 (475)
T KOG0615|consen  221 RDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANK  271 (475)
T ss_pred             hhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhcc
Confidence            345689999999999999999999999999999999999999999876543

>smart00090 RIO RIO-like kinase

Probab=98.20  E-value=7e-06  Score=59.59  Aligned_cols=110  Identities=14%  Similarity=0.023  Sum_probs=72.4

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------------------------hhHHHHHHHHHHHcCC
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------------------------LTRPLLLELKRLKDLH  121 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------------------------~~~~~~~e~~~l~~l~  121 (184)
                      +.+.+.++.|+.+.+|.+.. ...+|+.||+|.++.....                        ....+..|...+..+.
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~-~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       30 SAIGGCISTGKEANVYHALD-FDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             HHhCCeeccCcceeEEEEEe-cCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45667788899998888630 1247899999999854210                        0122457888888886


Q ss_pred             Ccc--hhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         122 HDH--LVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       122 h~n--i~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..  +.+.+.   . ...++||||++++++........ .++......++.||+.+++..+
T Consensus       109 ~~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH  165 (237)
T smart00090      109 EAGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLY  165 (237)
T ss_pred             hcCCCCCeeeE---e-cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHH
Confidence            533  222222   1 23489999999988876553322 3455566789999999987543

>KOG4250|consensus

Probab=98.19  E-value=6.4e-07  Score=72.23  Aligned_cols=89  Identities=27%  Similarity=0.398  Sum_probs=64.6

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCC------CceeEEeeecCCCchhhhhhhcc--cCccccccchhhhhhcccc
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDP------PHCCLLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMHDIVKFN   79 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~------~~~~~~~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~   79 (184)
                      ++.-.+ ||+++++++|+|||++.++-.+.      ....++||||++|++...+..++  ..+....+..++.....+.
T Consensus        55 ~e~~~~-EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al  133 (732)
T KOG4250|consen   55 RERWCR-EIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSAL  133 (732)
T ss_pred             HHHHHH-HHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHH
Confidence            344556 99999999999999999886553      35799999999999999998754  2456666666666666666


Q ss_pred             eeeecceeeecCcEEEEeEeeccch
Q psy8884          80 GYLKTKELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        80 ~~~~~~~~~~~g~~vavK~l~~~~~  104 (184)
                      .+++.       ..++++.+|+.++
T Consensus       134 ~~LrE-------n~IvHRDlKP~NI  151 (732)
T KOG4250|consen  134 RHLRE-------NGIVHRDLKPGNI  151 (732)
T ss_pred             HHHHH-------cCceeccCCCCcE
Confidence            66653       3455555555543

>KOG0581|consensus

Probab=98.17  E-value=5.2e-07  Score=67.61  Aligned_cols=88  Identities=22%  Similarity=0.348  Sum_probs=65.3

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCC-ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~-~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      ....| |++++.+..|+|+|.+.|.|.+.. ...++||||.+||+.+++.... .+..-.+..+..+.-.|..|++    
T Consensus       122 ~Qi~r-El~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh----  195 (364)
T KOG0581|consen  122 KQILR-ELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLH----  195 (364)
T ss_pred             HHHHH-HHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh----
Confidence            34456 999999999999999999999988 4999999999999999887542 2333334444444445555654    


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                        ....+.++.+|+++.
T Consensus       196 --~~~~IIHRDIKPsNl  210 (364)
T KOG0581|consen  196 --EERKIIHRDIKPSNL  210 (364)
T ss_pred             --hccCeeeccCCHHHe
Confidence              236778888888765

>KOG4278|consensus

Probab=98.16  E-value=1e-06  Score=70.73  Aligned_cols=51  Identities=27%  Similarity=0.548  Sum_probs=46.0

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      +-|.. |..+|..++|+|+|+++|+|+..+..+|++|||+.|+|.|+|...+
T Consensus       308 eEFLk-EAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  308 EEFLK-EAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             HHHHH-HHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhc
Confidence            45666 8889999999999999999999999999999999999999987643

>KOG0671|consensus

Probab=98.16  E-value=3.2e-06  Score=63.87  Aligned_cols=116  Identities=13%  Similarity=0.005  Sum_probs=87.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC--cc----hhhhheeeecCC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH--DH----LVKFIGACLDPP  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h--~n----i~~l~~~~~~~~  136 (184)
                      .+.+.+-.++++|.+|.+....  +..++..||+|+++.-.. -.+.-.-|+.++.++.+  |+    ++.+.+.+.-.+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~--D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECW--DRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             ccceehhhhhcCCcccceEEEe--ecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            3456677889999998877664  333488999999986432 14456778888988832  22    456666677789


Q ss_pred             cEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.++|.|.+. -|++++|+++ ...++-.+...++.|++++++.+++
T Consensus       165 hiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~  210 (415)
T KOG0671|consen  165 HICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD  210 (415)
T ss_pred             ceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh
Confidence            9999999764 3899999874 4567889999999999999997654

>KOG0984|consensus

Probab=98.16  E-value=6.3e-06  Score=57.73  Aligned_cols=109  Identities=12%  Similarity=0.082  Sum_probs=82.6

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEeecCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTEYCPK  147 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e~~~~  147 (184)
                      +-++.|+.|.+-.-  +..++|...|+|.++..-. ......+.|+.+... ...|.++.++|.+.+...+|+.||.|..
T Consensus        52 ~elGrGayG~vekm--rh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t  129 (282)
T KOG0984|consen   52 EELGRGAYGVVEKM--RHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT  129 (282)
T ss_pred             hhhcCCccchhhhe--eeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence            44556666655443  3789999999999986533 334567788877554 4789999999999889999999999986


Q ss_pred             CCHHHHHh---hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         148 GSLQDILE---NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       148 gsl~~~l~---~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       |+..+-+   +.+..+++..+=+|+..|..||..++
T Consensus       130 -Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~  165 (282)
T KOG0984|consen  130 -SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH  165 (282)
T ss_pred             -hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH
Confidence             7766554   24567889888899999999987543

>KOG0596|consensus

Probab=98.11  E-value=9.3e-06  Score=64.25  Aligned_cols=110  Identities=11%  Similarity=0.016  Sum_probs=79.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeecc--chhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS--RIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|++.+.++.||...||+...   .....+|+|.+...  +......|.+|+..|.+++ |.+|++++.+-...+.+|+|
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~---s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLN---SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeec---CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            355667788888888887651   12245666665432  2344677999999999994 89999999998889999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      |||-+. +|...|++...-++.-.+..+-.|++.++.
T Consensus       439 mE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~  474 (677)
T KOG0596|consen  439 MECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVK  474 (677)
T ss_pred             eecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHH
Confidence            998665 899999876544442245566777777765

>KOG0575|consensus

Probab=98.09  E-value=2.3e-06  Score=67.90  Aligned_cols=72  Identities=24%  Similarity=0.374  Sum_probs=56.8

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      ..+|+++-++|+|+|||++.+++.|....+++.|+|++|++...+.+.. .+.......++...-.|..|++.
T Consensus        65 v~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk-~ltEpEary~l~QIv~GlkYLH~  136 (592)
T KOG0575|consen   65 VLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRK-PLTEPEARYFLRQIVEGLKYLHS  136 (592)
T ss_pred             HHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcC-CCCcHHHHHHHHHHHHHHHHHHh
Confidence            3459999999999999999999999999999999999999999888543 33333444455556666667664

>KOG0196|consensus

Probab=98.09  E-value=1.1e-06  Score=71.87  Aligned_cols=76  Identities=18%  Similarity=0.337  Sum_probs=67.1

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      +--|.. |..+|.+..|+||.++.|+.+.....++++|||.+|+|..+|...+-.+....+-..+...+.|+.|+..
T Consensus       674 rrdFL~-EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsd  749 (996)
T KOG0196|consen  674 RRDFLS-EASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSD  749 (996)
T ss_pred             Hhhhhh-hhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhh
Confidence            566777 8999999999999999999999999999999999999999999887777777777778888888877754

>KOG1023|consensus

Probab=98.08  E-value=7.7e-06  Score=64.61  Aligned_cols=67  Identities=40%  Similarity=0.651  Sum_probs=61.7

Q ss_pred             HHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccCC
Q psy8884         117 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHP  183 (184)
Q Consensus       117 l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~~  183 (184)
                      |+.+.|.|+.+++|.+.+++..+++++||..|+|.+.+......+++.....++++|++||+..+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s   67 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS   67 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC
Confidence            3568899999999999999999999999999999999998888899999999999999999987754

>KOG0198|consensus

Probab=98.08  E-value=7.2e-07  Score=66.84  Aligned_cols=72  Identities=24%  Similarity=0.390  Sum_probs=51.9

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCC--ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~--~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ...|+.+|.+++|+|||+..|......  .+++.+||+++|++.+.+.+....+..-.........-.|..|++
T Consensus        61 l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH  134 (313)
T KOG0198|consen   61 LEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH  134 (313)
T ss_pred             HHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            356999999999999999999854544  599999999999999998875433333333333434444455555

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.07  E-value=4e-05  Score=57.25  Aligned_cols=115  Identities=10%  Similarity=-0.010  Sum_probs=73.6

Q ss_pred             cccccchhhhhhcccceeeecceeeec---CcEEEEeEeeccchhh-h----------HHHHHHHHHHHcCCCcchhhhh
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKE---GNKVAIKNLKKSRIDL-T----------RPLLLELKRLKDLHHDHLVKFI  129 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~vavK~l~~~~~~~-~----------~~~~~e~~~l~~l~h~ni~~l~  129 (184)
                      ..|.+.+.++.|++|.||.+..  ...   +..+|+|.....+... .          .....+...+..+.|+|+++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~--~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQC--ASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEE--cCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            3567778899999999998762  222   4466666543322110 0          1112333445677999999999


Q ss_pred             eeeecCC----cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         130 GACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       130 ~~~~~~~----~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++....    ..+++++++.. ++.+.+.... ..++..+..++.|+++||+..++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~  144 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHE  144 (294)
T ss_pred             EeeeEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHh
Confidence            8765432    34677777654 5666665432 35678888999999999986544

>KOG1024|consensus

Probab=98.06  E-value=5.6e-06  Score=63.08  Aligned_cols=119  Identities=14%  Similarity=0.058  Sum_probs=91.2

Q ss_pred             ccccccchhhhhhcccceeeeccee--eecC-cEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeec-CCc
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKEL--LKEG-NKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLD-PPH  137 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~  137 (184)
                      ...+....+..+|.+|.+|.+.|..  .+++ +.|-+|.++..... ....++.|...+..+.|||+.+..+.+.. .+.
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            3446677889999999999886653  2333 35567777765432 24567889999999999999999987654 577


Q ss_pred             EEEEEeecCCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILEN-------EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~-------~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++.+.++.-|+|..+|..       ....+...+...++.|++.||+-.+
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh  413 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH  413 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999972       2345677889999999999998544

>KOG0983|consensus

Probab=98.02  E-value=5.7e-06  Score=60.29  Aligned_cols=114  Identities=9%  Similarity=0.108  Sum_probs=83.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~  139 (184)
                      +++.+...+.++.|.-|.|+...  ...+|...|||.+.... .+..+..+..+.++.... .|.||+.+|+|.....++
T Consensus        90 dindl~~l~dlGsGtcG~V~k~~--~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~  167 (391)
T KOG0983|consen   90 DINDLENLGDLGSGTCGQVWKMR--FRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF  167 (391)
T ss_pred             ChHHhhhHHhhcCCCccceEEEE--EcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence            33444444556666666666654  34567899999998754 345566777777777664 899999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +.||.|.. .+..+++.-...+++..+=++...+.+||.
T Consensus       168 IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~  205 (391)
T KOG0983|consen  168 ICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALY  205 (391)
T ss_pred             HHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHH
Confidence            99998865 455666655567888888888888888876

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.01  E-value=2.4e-06  Score=62.68  Aligned_cols=74  Identities=31%  Similarity=0.553  Sum_probs=53.2

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc-ccCccccccchhhhhhcccceeee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      +.|.+ ++..+.+++|+|++++.|+|.+.+...+++|||+.|++.+.+... ...++......+......+..|++
T Consensus        46 ~~~~~-e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh  120 (259)
T PF07714_consen   46 EEFLN-EIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH  120 (259)
T ss_dssp             HHHHH-HHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeee-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            44555 899999999999999999999888899999999999999999876 334444444444444554444444

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.01  E-value=2.9e-05  Score=51.51  Aligned_cols=98  Identities=14%  Similarity=0.049  Sum_probs=69.6

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC--cchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH--DHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h--~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .++.|..+.+|...    ..+..+++|..+....  ...+..|...+..+.+  ..++++++.....+..++++||++++
T Consensus         5 ~i~~g~~~~v~~~~----~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           5 LLKGGLTNRVYLLG----TKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             ecccccccceEEEE----ecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            35556666666654    3447899999876533  4568889999998876  47788877777667899999999988


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++..+        +......++.+++++++..+.
T Consensus        79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~  104 (155)
T cd05120          79 TLDEV--------SEEEKEDIAEQLAELLAKLHQ  104 (155)
T ss_pred             ecccC--------CHHHHHHHHHHHHHHHHHHhC
Confidence            76543        345556677778877775543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0603|consensus

Probab=98.00  E-value=6.6e-06  Score=65.75  Aligned_cols=109  Identities=11%  Similarity=-0.123  Sum_probs=77.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc-CCCcchhhhheeeecCCcEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD-LHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~-l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      .+.+..-++.+..+.+-...  ...+++..++|.+.....    +...|+.++.. -.|+|++++.+.+.++-..|+|||
T Consensus       323 ~y~~~~~~~~gs~s~~~~~~--~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  323 SYEFREELGEGSFSAVKYCE--SSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             hhccccccCCCCccceeeee--ccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            34443334444444444443  456778889999987622    23355544444 479999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+.+|.+.+.+...+..  ...+..|+.+++.++..+|
T Consensus       397 ~l~g~ell~ri~~~~~~--~~e~~~w~~~lv~Av~~LH  432 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEF--CSEASQWAAELVSAVDYLH  432 (612)
T ss_pred             hccccHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHH
Confidence            99999999988765532  3667789999999988544

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.97  E-value=3.6e-06  Score=62.24  Aligned_cols=69  Identities=19%  Similarity=0.341  Sum_probs=49.2

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      +...++++.|+|++++.|+|.+....++++|||++|++.+.+......++.-....+......+..+++
T Consensus        66 ~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (274)
T cd05076          66 TASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE  134 (274)
T ss_pred             HHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            566788999999999999999999999999999999998887654323332222233334444444444

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=97.97  E-value=5.3e-06  Score=60.99  Aligned_cols=48  Identities=23%  Similarity=0.465  Sum_probs=43.2

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ |+.++.++.|+|++++.|++.+.+..++++||+++|++.+.+...
T Consensus        53 ~~~-e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (266)
T cd05064          53 FLA-EALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKH  100 (266)
T ss_pred             HHH-HHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhC
Confidence            344 899999999999999999999999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0664|consensus

Probab=97.92  E-value=1.1e-06  Score=63.87  Aligned_cols=109  Identities=16%  Similarity=0.158  Sum_probs=80.7

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeecc--chhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----CcEEEEE
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS--RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PHCCLLT  142 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~~~lv~  142 (184)
                      .-++-|++|-+|-..  +-..|+.||.|.+..-  +......+.+|+.++...+|.|+...+.....+     +.+|+++
T Consensus        59 RPIGYGAFGVVWsVT--DPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T  136 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVT--DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT  136 (449)
T ss_pred             CcccccceeEEEecc--CCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence            345667776666554  4456889999988643  223456788999999999999999988876544     3477888


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |.+.. +|...+-+ ...++......+..||++||.-++|
T Consensus       137 ELmQS-DLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHs  174 (449)
T KOG0664|consen  137 ELMQS-DLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHT  174 (449)
T ss_pred             HHHHh-hhhheecc-CCCCCcchhhhhHHHHHhhhHHHhh
Confidence            88876 67776654 4468888889999999999985544

>KOG0589|consensus

Probab=97.90  E-value=4.6e-06  Score=64.66  Aligned_cols=50  Identities=20%  Similarity=0.482  Sum_probs=44.8

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCc-eeEEeeecCCCchhhhhhhcc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPH-CCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~-~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ....|+++++++.|||++.....+.+.+. .+++|+||.+|++.+.+...+
T Consensus        49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK   99 (426)
T ss_pred             HHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh
Confidence            45669999999999999999999999887 999999999999998887654

>KOG1023|consensus

Probab=97.87  E-value=5.8e-06  Score=65.28  Aligned_cols=72  Identities=44%  Similarity=0.696  Sum_probs=61.4

Q ss_pred             hhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeec
Q psy8884          19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        19 l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      |.++.|.|+.+|+|.|.+++..+.+++||.+|+++|.+.+.....+++....++.....|..|++.....++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~h   72 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYH   72 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceee
Confidence            467899999999999999999999999999999999999988899998887887777777777776433333

>KOG1167|consensus

Probab=97.85  E-value=6.6e-05  Score=57.43  Aligned_cols=111  Identities=14%  Similarity=0.106  Sum_probs=88.1

Q ss_pred             cccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+...+.+++|.+..++...... ...+..||+|.+.....  .....+|++.+..+ .+.||+++.+++..++.+.+|
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            345556778888888888876211 22677999999987543  34578999999998 588999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +||.+.-+..+++..    ++..+...+++.+..||+..
T Consensus       114 lp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~  148 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHL  148 (418)
T ss_pred             ecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhh
Confidence            999999988888865    55677888999999999843

>KOG0580|consensus

Probab=97.84  E-value=3.1e-06  Score=60.27  Aligned_cols=90  Identities=16%  Similarity=0.308  Sum_probs=63.8

Q ss_pred             CcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc-Cccccccchhhhhhcccceeeecc
Q psy8884           7 GRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMHDIVKFNGYLKTK   85 (184)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
                      -+++..| |+++-+.|+|+||.++.|++.+....+++.||.++|++...|..... .++.-.-...+.+.+....|.+. 
T Consensus        65 v~~qlrR-EiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~-  142 (281)
T KOG0580|consen   65 VEHQLRR-EIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL-  142 (281)
T ss_pred             chhhhhh-eeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc-
Confidence            3555566 99999999999999999999999999999999999999988874322 22222222344444444445443 


Q ss_pred             eeeecCcEEEEeEeeccch
Q psy8884          86 ELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        86 ~~~~~g~~vavK~l~~~~~  104 (184)
                            +.|..+.+++.+.
T Consensus       143 ------k~VIhRdiKpenl  155 (281)
T KOG0580|consen  143 ------KRVIHRDIKPENL  155 (281)
T ss_pred             ------CCcccCCCCHHHh
Confidence                  5666666666543

>KOG0670|consensus

Probab=97.83  E-value=7.1e-05  Score=59.19  Aligned_cols=103  Identities=20%  Similarity=0.175  Sum_probs=73.8

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC------cchhhhheeeecCCcEEEEEeec
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH------DHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h------~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      .+.|-++.|..+.  +...|..||||+|+..... ...-+.|+++|.+|..      -+.++++-.|.-.+++|||+|-+
T Consensus       440 ~GkGvFs~Vvra~--D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L  516 (752)
T KOG0670|consen  440 TGKGVFSTVVRAR--DQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL  516 (752)
T ss_pred             cccceeeeeeecc--ccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh
Confidence            3334333444433  4556889999999865432 3455789999998832      35788888888899999999987


Q ss_pred             CCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHhh
Q psy8884         146 PKGSLQDILENE--QFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       146 ~~gsl~~~l~~~--~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      .. +|.++|++-  ..++...+...++.|+.-||.
T Consensus       517 sl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALk  550 (752)
T KOG0670|consen  517 SL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALK  550 (752)
T ss_pred             hc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHH
Confidence            76 899999863  345666777778888877765

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.82  E-value=7.6e-06  Score=65.42  Aligned_cols=50  Identities=18%  Similarity=0.261  Sum_probs=44.6

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      ..+.+.|+..+..+.|+|++++.++|.+.+..++++|||++|++.+.+..
T Consensus       109 ~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~  158 (478)
T PTZ00267        109 AAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQ  158 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHH
Confidence            34556699999999999999999999999999999999999999887754

>KOG1166|consensus

Probab=97.78  E-value=6e-05  Score=64.08  Aligned_cols=115  Identities=17%  Similarity=0.147  Sum_probs=82.1

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC---CcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH---HDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~---h~ni~~l~~~~~~~~~~~  139 (184)
                      ...+.+...++.|++|.||.+.   ..+|+.||+|.=++.+.+.   |.-...++.+|+   -+.+..+..++...+..+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~---~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVAT---HSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             ceeEEEEeeeccccceEEEEee---cCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            3446677889999999999986   2339999999998876643   222223344443   234555556666678889


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh---------hccCCC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV---------LRIHPR  184 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~---------~~~~~~  184 (184)
                      +|+||.+.|+|.+++... ..+++.....+..|++.-+.         +||.|+
T Consensus       771 lv~ey~~~Gtlld~~N~~-~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPD  823 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTN-KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPD  823 (974)
T ss_pred             eeeeccccccHHHhhccC-CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcc
Confidence            999999999999999743 46888888888877776554         677774

>KOG0578|consensus

Probab=97.77  E-value=8.2e-06  Score=64.38  Aligned_cols=91  Identities=19%  Similarity=0.374  Sum_probs=66.5

Q ss_pred             ccCcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           5 DVGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.+.-..-+|+.+|+..+|+|+|+++..+...+..-++|||+.+|++.|.+....  ++...+..+..+.-.+..|+|.
T Consensus       310 ~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~  387 (550)
T KOG0578|consen  310 KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHA  387 (550)
T ss_pred             cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHh
Confidence            33333444459999999999999999999998899999999999999999887653  4444555555555555556553


Q ss_pred             ceeeecCcEEEEeEeeccch
Q psy8884          85 KELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        85 ~~~~~~g~~vavK~l~~~~~  104 (184)
                             +.+++..++..++
T Consensus       388 -------~gIiHrDIKSDnI  400 (550)
T KOG0578|consen  388 -------RGIIHRDIKSDNI  400 (550)
T ss_pred             -------cceeeecccccee
Confidence                   5566666665544

>KOG0583|consensus

Probab=97.76  E-value=1.6e-05  Score=61.48  Aligned_cols=83  Identities=19%  Similarity=0.408  Sum_probs=61.7

Q ss_pred             hhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      .|+.++..+. |+||+++.-+...+...++++|||.+|.+.+.+.+. ..+..-....+..+...+..|++.       .
T Consensus        68 rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~-g~l~E~~ar~~F~Qlisav~y~H~-------~  139 (370)
T KOG0583|consen   68 REISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNK-GRLKEDEARKYFRQLISAVAYCHS-------R  139 (370)
T ss_pred             HHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHh-------C
Confidence            4999999998 999999999999999999999999999999998873 333333333444444444445543       4


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      -++++.+|+++.
T Consensus       140 gi~HRDLK~ENi  151 (370)
T KOG0583|consen  140 GIVHRDLKPENI  151 (370)
T ss_pred             CEeeCCCCHHHE
Confidence            567777777665

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=97.75  E-value=2e-05  Score=57.85  Aligned_cols=69  Identities=17%  Similarity=0.348  Sum_probs=49.3

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ++..+.++.|+|++++.++|.+....++++||++.|++...+......+..-....+......+..+++
T Consensus        54 ~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  122 (262)
T cd05077          54 TASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE  122 (262)
T ss_pred             HHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            567888999999999999999998999999999999998877654323333223333334444444544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=97.70  E-value=2.8e-05  Score=57.07  Aligned_cols=47  Identities=19%  Similarity=0.391  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        54 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  100 (267)
T cd05066          54 SEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHD  100 (267)
T ss_pred             HHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcC
Confidence            38889999999999999999999899999999999999998887543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=97.69  E-value=2.1e-05  Score=59.70  Aligned_cols=48  Identities=17%  Similarity=0.317  Sum_probs=42.9

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      +...|+.+++.+.|+|++++.++|.+.+..++++|||++|++.+.+..
T Consensus        45 ~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (327)
T cd08227          45 FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT   92 (327)
T ss_pred             HHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh
Confidence            444588889999999999999999999999999999999999988754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=97.68  E-value=2.7e-05  Score=56.76  Aligned_cols=49  Identities=24%  Similarity=0.461  Sum_probs=43.5

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      -|.+ |+.+++++.|+|++++.++|.+....++++||+++|++.+.+...
T Consensus        45 ~~~~-e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~   93 (256)
T cd05114          45 DFIE-EAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR   93 (256)
T ss_pred             HHHH-HHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhC
Confidence            3444 899999999999999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.67  E-value=0.00062  Score=50.49  Aligned_cols=105  Identities=23%  Similarity=0.185  Sum_probs=80.6

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHHHHcCCCc-chhhhheeeecCCcEEEEEeecC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKRLKDLHHD-HLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~-ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      .++.++++.++...    .. ..+++|.+......   ....+.+|..++..+.|+ +++++...+......+++++++.
T Consensus         7 ~l~~g~~~~v~~~~----~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           7 KLGEGSFGEVYLAR----DR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             eecCCCCeEEEEEE----ec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            34455555555543    12 78899999765432   366788999999999988 79999998877677899999999


Q ss_pred             CCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhc
Q psy8884         147 KGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       147 ~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ++++.+++....  ..+.......++.|++.++...
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  117 (384)
T COG0515          82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL  117 (384)
T ss_pred             CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            999997776543  2578888999999999997643

>KOG0586|consensus

Probab=97.67  E-value=9e-06  Score=64.73  Aligned_cols=51  Identities=24%  Similarity=0.278  Sum_probs=45.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKL   63 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~   63 (184)
                      ..|+++|..+.|+|||+++++.......++|+||+.+|.+++++.+.....
T Consensus       103 ~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~  153 (596)
T KOG0586|consen  103 GREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMK  153 (596)
T ss_pred             HHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccch
Confidence            349999999999999999999999999999999999999999998765433

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=97.66  E-value=2.4e-05  Score=67.71  Aligned_cols=66  Identities=26%  Similarity=0.424  Sum_probs=50.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .++..+.+++|+|+++++|+|.+....++++|||++|++.+.++.    +++.....+......+..|+|
T Consensus       732 ~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH  797 (968)
T PLN00113        732 SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLH  797 (968)
T ss_pred             HHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhc
Confidence            468889999999999999999999999999999999999998864    222233344444444455555

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.64  E-value=0.0002  Score=50.42  Aligned_cols=99  Identities=18%  Similarity=0.085  Sum_probs=63.3

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh----------------------hhHHHHHHHHHHHcCCCc
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID----------------------LTRPLLLELKRLKDLHHD  123 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~----------------------~~~~~~~e~~~l~~l~h~  123 (184)
                      +...+.++.|+.+.+|.+..   .+|+.||+|.++.....                      .......|...+..+.|+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   93 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALD---PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE   93 (198)
T ss_pred             hhcCCccccCcceEEEEEEc---CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence            34457788898888887752   36899999987653210                      011255678888888776


Q ss_pred             c--hhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         124 H--LVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       124 n--i~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      +  +...++    ....+++|||++++++......       .....++.+++.++.
T Consensus        94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~  139 (198)
T cd05144          94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIV  139 (198)
T ss_pred             CCCCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHH
Confidence            4  333222    2445899999999998765421       223456666666665

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.64  E-value=0.00016  Score=51.48  Aligned_cols=106  Identities=18%  Similarity=0.164  Sum_probs=72.1

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCc--chhhhheeeecC---CcEEEEEeec
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHD--HLVKFIGACLDP---PHCCLLTEYC  145 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~--ni~~l~~~~~~~---~~~~lv~e~~  145 (184)
                      ++.|....+|...   ...|..+++|....... .....+..|..++..+.+.  ++.+++......   +..+++|||+
T Consensus         6 l~~G~~n~~~~v~---~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           6 LSGGQSNLTYLLT---AGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             cCCCccceEEEEE---ecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            3445555666653   22257899998765432 1345678899999888653  345566555443   2568999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++++.+.+..  ..++..+...++.++++.|+..++
T Consensus        83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            99887775532  246778888899999999987664

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.59  E-value=3.6e-05  Score=56.04  Aligned_cols=49  Identities=31%  Similarity=0.554  Sum_probs=42.1

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|.+ ++.+++++.|+|++++.|+|.. +..++++||+++|++.+.+....
T Consensus        47 ~~~~-e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          47 AFFE-TASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREK   95 (259)
T ss_pred             HHHH-HHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhc
Confidence            3444 7889999999999999999988 77899999999999999887543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PHA02988 hypothetical protein; Provisional

Probab=97.59  E-value=6.6e-05  Score=55.85  Aligned_cols=46  Identities=28%  Similarity=0.686  Sum_probs=40.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.|++.+    ....++++|||++|++.+.+...
T Consensus        67 ~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  116 (283)
T PHA02988         67 NEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE  116 (283)
T ss_pred             HHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC
Confidence            49999999999999999999877    34678999999999999988754

>KOG1164|consensus

Probab=97.59  E-value=0.00046  Score=52.44  Aligned_cols=111  Identities=15%  Similarity=0.024  Sum_probs=81.1

Q ss_pred             ccccchhhhhhcccceeeecceeeec-CcEEEEeEeeccchhhhHHHHHHHHHHHcCCC----cchhhhheee-ecCCcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKE-GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH----DHLVKFIGAC-LDPPHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h----~ni~~l~~~~-~~~~~~  138 (184)
                      .+.+...++.|++|.+|.+.  .... ...+|+|.-..........+..|..++..+..    +.+..++... ....+-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~--~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVS--DKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEE--ecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            56777889999999999876  2222 35788888776533222256677777777762    4566666666 356778


Q ss_pred             EEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhh
Q psy8884         139 CLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~  178 (184)
                      ++||+.+ |.+|.++.+... ..++..+.+.++.|++.+|.
T Consensus        97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~  136 (322)
T KOG1164|consen   97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALE  136 (322)
T ss_pred             EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHH
Confidence            9999866 458999886543 67889999999999999987

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=97.59  E-value=5.3e-05  Score=55.35  Aligned_cols=48  Identities=27%  Similarity=0.538  Sum_probs=42.6

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ |+.++.++.|+|++++.++|.+....++++||++.|++.+.+...
T Consensus        46 ~~~-e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~   93 (256)
T cd05113          46 FIE-EAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH   93 (256)
T ss_pred             HHH-HHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc
Confidence            444 889999999999999999999988899999999999999888653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.57  E-value=3.9e-05  Score=56.04  Aligned_cols=49  Identities=29%  Similarity=0.432  Sum_probs=42.5

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKL   63 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~   63 (184)
                      +...+..+.|+|++++.+.+.+++..++++|||+.|++.+.+......+
T Consensus        49 e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~   97 (258)
T cd05078          49 AASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLI   97 (258)
T ss_pred             HHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCC
Confidence            6778889999999999999999888999999999999999887654333

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=97.56  E-value=4.9e-05  Score=55.20  Aligned_cols=47  Identities=23%  Similarity=0.424  Sum_probs=42.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+..+.++.|+|++++.++|.+....++++||++++++.+.+....
T Consensus        42 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   88 (252)
T cd05084          42 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG   88 (252)
T ss_pred             HHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCC
Confidence            38889999999999999999999999999999999999998886543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=97.56  E-value=3.9e-05  Score=57.98  Aligned_cols=46  Identities=22%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++|||++|++.+.+...
T Consensus        47 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   92 (318)
T cd05582          47 MERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE   92 (318)
T ss_pred             HHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc
Confidence            4788999999999999999999999999999999999998887653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=97.53  E-value=4.7e-05  Score=58.24  Aligned_cols=46  Identities=20%  Similarity=0.268  Sum_probs=42.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++..+.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        80 ~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~  125 (340)
T PTZ00426         80 SERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN  125 (340)
T ss_pred             HHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc
Confidence            3888999999999999999999999999999999999998888654

>KOG0600|consensus

Probab=97.52  E-value=6.9e-05  Score=58.78  Aligned_cols=76  Identities=16%  Similarity=0.202  Sum_probs=52.8

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .-+|...|+.+|++|.|+||+++.+..++.  ...++|.|||+. +|.-.+.+....+..-.+..++...-.|..|+|.
T Consensus       159 ~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~  236 (560)
T KOG0600|consen  159 FPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS  236 (560)
T ss_pred             chHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh
Confidence            445666699999999999999999999887  679999999965 4444455554444444444455555444545443

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.51  E-value=5.8e-05  Score=58.42  Aligned_cols=47  Identities=19%  Similarity=0.207  Sum_probs=42.3

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        49 ~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~   95 (377)
T cd05629          49 KAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY   95 (377)
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhc
Confidence            34888999999999999999999999999999999999998887653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=97.51  E-value=5.1e-05  Score=56.84  Aligned_cols=47  Identities=28%  Similarity=0.687  Sum_probs=42.2

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      |.+ |+.++.++.|+|++++.++|.+....++++||+++|++.+.+..
T Consensus        66 ~~~-E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          66 FLK-EVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSS  112 (304)
T ss_pred             HHH-HHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            444 88999999999999999999998889999999999999888754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0597|consensus

Probab=97.51  E-value=1.1e-05  Score=64.32  Aligned_cols=48  Identities=25%  Similarity=0.412  Sum_probs=43.0

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .++|++++++++|+||+.++..+.+..+..+|+|||.+ ++..++...+
T Consensus        48 l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~   95 (808)
T KOG0597|consen   48 LRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDG   95 (808)
T ss_pred             HHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhcc
Confidence            56799999999999999999999999999999999955 9988887654

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.51  E-value=5.2e-05  Score=58.34  Aligned_cols=47  Identities=21%  Similarity=0.275  Sum_probs=42.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++..+.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        49 ~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~   95 (364)
T cd05599          49 RAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK   95 (364)
T ss_pred             HHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHc
Confidence            45889999999999999999999999999999999999999888654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=97.51  E-value=7.9e-05  Score=54.70  Aligned_cols=46  Identities=24%  Similarity=0.668  Sum_probs=42.1

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+..+..+.|+|++++.+.|.+....++++||++.|++.+.+....
T Consensus        45 e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~   90 (269)
T cd05042          45 EVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNR   90 (269)
T ss_pred             HHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhcc
Confidence            8888999999999999999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=97.50  E-value=0.00012  Score=57.30  Aligned_cols=48  Identities=27%  Similarity=0.562  Sum_probs=42.8

Q ss_pred             chhhhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      +.+ |+.++.++. |+|++++.|+|.+.+..++++|||++|++.+.+...
T Consensus        87 ~~~-Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105          87 LMS-ELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             HHH-HHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHh
Confidence            444 889999996 999999999999999999999999999999888653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=97.49  E-value=6.6e-05  Score=58.26  Aligned_cols=48  Identities=17%  Similarity=0.280  Sum_probs=43.0

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|..++.++.|+|++++.+++.+....++++|||++|++.+.+.+..
T Consensus        49 ~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~   96 (381)
T cd05626          49 KAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME   96 (381)
T ss_pred             HHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC
Confidence            348889999999999999999999999999999999999988876543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=97.49  E-value=8.6e-05  Score=53.81  Aligned_cols=47  Identities=26%  Similarity=0.502  Sum_probs=42.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+..+.++.|+|++++.++|.+....++++||++++++.+.+....
T Consensus        41 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   87 (250)
T cd05085          41 SEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKK   87 (250)
T ss_pred             HHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcC
Confidence            48889999999999999999999889999999999999988876543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=97.48  E-value=0.00011  Score=53.68  Aligned_cols=45  Identities=22%  Similarity=0.406  Sum_probs=39.0

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+.+++++.|+|++++.++|.. +..++++||++++++.+.+....
T Consensus        45 E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~   89 (257)
T cd05115          45 EAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKK   89 (257)
T ss_pred             HHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCC
Confidence            7899999999999999999854 56889999999999998886543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=97.47  E-value=6.1e-05  Score=56.77  Aligned_cols=46  Identities=17%  Similarity=0.197  Sum_probs=41.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        42 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~   87 (312)
T cd05585          42 AERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQRE   87 (312)
T ss_pred             HHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhc
Confidence            3788899999999999999999999999999999999998887653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=97.47  E-value=7.1e-05  Score=54.85  Aligned_cols=46  Identities=20%  Similarity=0.419  Sum_probs=41.9

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+..+.++.|+|++++.+.+.+....++++||++++++.+.+....
T Consensus        55 e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~  100 (266)
T cd05033          55 EASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLREND  100 (266)
T ss_pred             HHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhcc
Confidence            8889999999999999999999888999999999999999886543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=97.46  E-value=9.4e-05  Score=54.35  Aligned_cols=44  Identities=27%  Similarity=0.633  Sum_probs=40.9

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      |...+.++.|+|++++.|+|.+....++++||+++|++.+.+..
T Consensus        45 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   88 (269)
T cd05087          45 EAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRS   88 (269)
T ss_pred             HHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHH
Confidence            88899999999999999999998889999999999999988865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=97.46  E-value=6.7e-05  Score=57.02  Aligned_cols=46  Identities=22%  Similarity=0.291  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        67 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  112 (329)
T PTZ00263         67 QEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA  112 (329)
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc
Confidence            4888999999999999999999999999999999999998887654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=97.44  E-value=7.8e-05  Score=57.69  Aligned_cols=47  Identities=17%  Similarity=0.265  Sum_probs=42.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+.+.+.+..++++|||++|++.+.+....
T Consensus        50 ~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~   96 (376)
T cd05598          50 AERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG   96 (376)
T ss_pred             HHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC
Confidence            48899999999999999999999999999999999999999886543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.44  E-value=8.9e-05  Score=54.41  Aligned_cols=46  Identities=22%  Similarity=0.382  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.+++|+|++++.++|.+.+..++++||++++++.+.+...
T Consensus        54 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (268)
T cd06624          54 EEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK   99 (268)
T ss_pred             HHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHh
Confidence            4889999999999999999999999999999999999999988754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=97.43  E-value=0.00013  Score=53.53  Aligned_cols=47  Identities=15%  Similarity=0.378  Sum_probs=42.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+..+.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        54 ~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  100 (269)
T cd05065          54 SEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQND  100 (269)
T ss_pred             HHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCC
Confidence            38888999999999999999999888999999999999988876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=97.43  E-value=6.2e-05  Score=56.12  Aligned_cols=47  Identities=26%  Similarity=0.388  Sum_probs=42.4

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||+++|++.+.+...
T Consensus        49 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   95 (291)
T cd05612          49 HNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS   95 (291)
T ss_pred             HHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHc
Confidence            34889999999999999999999999999999999999998887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=97.42  E-value=8.9e-05  Score=54.52  Aligned_cols=48  Identities=27%  Similarity=0.558  Sum_probs=42.3

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ +...+..+.|+|++++.+.|.+....++++|||+.|++.+.+...
T Consensus        42 ~~~-e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   89 (268)
T cd05086          42 FLQ-QGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQE   89 (268)
T ss_pred             HHH-HHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhh
Confidence            444 677888999999999999999998999999999999999888754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=97.42  E-value=9.5e-05  Score=53.91  Aligned_cols=49  Identities=27%  Similarity=0.516  Sum_probs=43.2

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |.+ |+.++.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        46 ~~~-e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   94 (256)
T cd05059          46 FIE-EAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERK   94 (256)
T ss_pred             HHH-HHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcc
Confidence            444 8889999999999999999999888999999999999999886543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.42  E-value=8.1e-05  Score=57.74  Aligned_cols=48  Identities=17%  Similarity=0.288  Sum_probs=43.0

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ...|..++.++.|+|++++.+.+.+....++++|||++|++.+.+.+.
T Consensus        48 ~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~   95 (382)
T cd05625          48 VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM   95 (382)
T ss_pred             HHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc
Confidence            345888999999999999999999999999999999999998887654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG1165|consensus

Probab=97.41  E-value=0.0008  Score=50.68  Aligned_cols=109  Identities=13%  Similarity=-0.029  Sum_probs=79.6

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      .|.....++.|.+|..+.+.  .+++++.||+|.=....  ....+.-|.+..+.+. -+.|...+.+-..+-.=.+|+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~--Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGK--NLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeeccc--ccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            46677889999999888876  89999999999754322  1344566777777765 4666665544444444468999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      .+. -||+++....+..++....+.++.|++.-+.
T Consensus       105 LLG-PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie  138 (449)
T KOG1165|consen  105 LLG-PSLEDLFDLCGRRFSVKTVAMIAKQMITRIE  138 (449)
T ss_pred             hhC-cCHHHHHHHhcCcccHHhHHHHHHHHHHHHH
Confidence            764 5999999888778899999999998876655

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.41  E-value=7.2e-05  Score=55.25  Aligned_cols=48  Identities=23%  Similarity=0.407  Sum_probs=42.9

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ |++++.++.|+|++++.+.+.+....++++||++++++.+.+...
T Consensus        49 ~~~-e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (280)
T cd06611          49 FMV-EIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLEL   96 (280)
T ss_pred             HHH-HHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHh
Confidence            444 889999999999999999999999999999999999998887654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=97.40  E-value=9.5e-05  Score=56.05  Aligned_cols=46  Identities=26%  Similarity=0.287  Sum_probs=41.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++.|+|++++.+++.+....++++||+++|++.+.+...
T Consensus        44 ~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~   89 (323)
T cd05595          44 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE   89 (323)
T ss_pred             HHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHc
Confidence            3788899999999999999999999999999999999998777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=97.40  E-value=0.00011  Score=55.94  Aligned_cols=46  Identities=26%  Similarity=0.293  Sum_probs=41.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++..+.|+|++++.+++.+.+..++++||+++|++.+.+...
T Consensus        44 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~   89 (328)
T cd05593          44 TESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE   89 (328)
T ss_pred             HHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhc
Confidence            3778899999999999999999999999999999999998877654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=97.39  E-value=7.7e-05  Score=56.51  Aligned_cols=48  Identities=27%  Similarity=0.266  Sum_probs=42.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++..+.|+|++++.+++.+.+..++++||++++++.+.+....
T Consensus        48 ~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   95 (323)
T cd05584          48 KAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG   95 (323)
T ss_pred             HHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC
Confidence            358889999999999999999999999999999999999988876543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=97.39  E-value=0.00011  Score=53.56  Aligned_cols=46  Identities=20%  Similarity=0.339  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.+++++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        48 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~   93 (256)
T cd08221          48 NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQ   93 (256)
T ss_pred             HHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhc
Confidence            4889999999999999999999999999999999999999888654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=97.37  E-value=0.00012  Score=55.77  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=41.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|..++..+.|+|++++.+++.+....++++||+++|++.+.+..
T Consensus        50 ~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (331)
T cd05597          50 EERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             HHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH
Confidence            377888899999999999999999999999999999999988865

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG4257|consensus

Probab=97.37  E-value=4.5e-05  Score=61.57  Aligned_cols=57  Identities=25%  Similarity=0.577  Sum_probs=48.4

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCcccc
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPM   66 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~   66 (184)
                      .+.|.. |-.+|+++.|+||++++|+|.+.+ .-++||.++.|.+..+|+...-.++..
T Consensus       435 tekflq-Ea~iMrnfdHphIikLIGv~~e~P-~WivmEL~~~GELr~yLq~nk~sL~l~  491 (974)
T KOG4257|consen  435 TEKFLQ-EASIMRNFDHPHIIKLIGVCVEQP-MWIVMELAPLGELREYLQQNKDSLPLR  491 (974)
T ss_pred             HHHHHH-HHHHHHhCCCcchhheeeeeeccc-eeEEEecccchhHHHHHHhccccchHH
Confidence            566777 889999999999999999999966 899999999999999998765444443

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=97.37  E-value=0.00015  Score=53.23  Aligned_cols=46  Identities=17%  Similarity=0.384  Sum_probs=41.8

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+..+.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        56 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  101 (268)
T cd05063          56 EASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHD  101 (268)
T ss_pred             HHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcC
Confidence            7888999999999999999999999999999999999988886543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.36  E-value=0.0011  Score=53.79  Aligned_cols=31  Identities=16%  Similarity=0.177  Sum_probs=23.0

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeecc
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKS  102 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~  102 (184)
                      +-++++..++|+.+.  ...+|+.||||++++.
T Consensus       125 ~PlasaSiaQVh~A~--l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        125 KPLASASIAQVHFAR--LKDNGREVVVKVLRPD  155 (537)
T ss_pred             hhhcCCCccEEEEEE--ECCCCCEEEEEEeCcc
Confidence            456778888888875  2224899999999865

>KOG0585|consensus

Probab=97.35  E-value=0.00014  Score=56.86  Aligned_cols=44  Identities=39%  Similarity=0.563  Sum_probs=37.5

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhh
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQD   54 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~   54 (184)
                      -++.|+.+|+++.|+|+|+++-+--++  ...++|.|||.+|....
T Consensus       154 kv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w  199 (576)
T KOG0585|consen  154 KVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW  199 (576)
T ss_pred             HHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCcccc
Confidence            356699999999999999999987664  56899999999988754

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.34  E-value=0.00013  Score=55.51  Aligned_cols=46  Identities=22%  Similarity=0.311  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||+++|++.+.+...
T Consensus        52 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (331)
T cd06649          52 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA   97 (331)
T ss_pred             HHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHc
Confidence            3889999999999999999999999999999999999999888654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1989|consensus

Probab=97.34  E-value=8e-05  Score=61.51  Aligned_cols=48  Identities=31%  Similarity=0.442  Sum_probs=39.5

Q ss_pred             chhhhhhhhhhcC-CCCcceeeccccC-------CCceeEEeeecCCCchhhhhhh
Q psy8884          11 FVPTAFYKLKDLH-HDHLVKFIGACLD-------PPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        11 ~~~~~~~~l~~l~-h~n~~~~~g~~~~-------~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      ..+.|+++|++|+ |+|||.+++.+..       ..+.+++||||++|++-|++..
T Consensus        80 ~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen   80 AVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             HHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHH
Confidence            4567999999996 9999999984322       2468999999999999998874

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=97.34  E-value=0.00018  Score=53.17  Aligned_cols=68  Identities=26%  Similarity=0.490  Sum_probs=48.7

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      |...+.++.|+|++++.++|.+ +..++++||++.|++.+.+......+.......+......+..+++
T Consensus        59 e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH  126 (279)
T cd05057          59 EAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE  126 (279)
T ss_pred             HHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999999988 6789999999999999988764433333333333333333333333

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0032|consensus

Probab=97.34  E-value=0.00013  Score=56.70  Aligned_cols=49  Identities=29%  Similarity=0.408  Sum_probs=44.9

Q ss_pred             chhhhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..+.|+.+|+++. |+|++.+.+.+.+....++++|+|.+|.+.+.+...
T Consensus        81 ~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen   81 DVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK  130 (382)
T ss_pred             HHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc
Confidence            4566999999998 999999999999999999999999999999987765

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=97.32  E-value=0.00013  Score=55.23  Aligned_cols=46  Identities=24%  Similarity=0.278  Sum_probs=41.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++.|+|++++.+++.+....++++||+++|++.+.+...
T Consensus        44 ~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   89 (323)
T cd05571          44 TESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE   89 (323)
T ss_pred             HHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc
Confidence            3788899999999999999999999999999999999998877653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=97.32  E-value=0.00014  Score=55.96  Aligned_cols=48  Identities=19%  Similarity=0.253  Sum_probs=42.7

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .+.|..++.++.|+|++++.+.+.+....++++|||++|++.+.+...
T Consensus        48 ~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~   95 (363)
T cd05628          48 IRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK   95 (363)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhc
Confidence            345888899999999999999999999999999999999999888654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=97.31  E-value=0.00017  Score=53.83  Aligned_cols=46  Identities=22%  Similarity=0.617  Sum_probs=42.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++......++++|||+++++.+.+...
T Consensus        66 ~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          66 KEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             HHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            3899999999999999999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=97.31  E-value=0.00011  Score=55.98  Aligned_cols=46  Identities=30%  Similarity=0.361  Sum_probs=42.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        50 ~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~   95 (333)
T cd05600          50 TERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL   95 (333)
T ss_pred             HHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc
Confidence            3788899999999999999999999999999999999999988654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0574|consensus

Probab=97.30  E-value=4.8e-05  Score=56.31  Aligned_cols=71  Identities=21%  Similarity=0.385  Sum_probs=57.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .|+++++++..+++|+.+|.+....+.-+|||||-.||..|.+...+-.+..-.+..++..+-.|..|++.
T Consensus        77 KEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~  147 (502)
T KOG0574|consen   77 KEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD  147 (502)
T ss_pred             HHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH
Confidence            48899999999999999999999999999999999999999887655555555555556555555556554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	184
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-05

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 20  KDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFN 79
           +   H+++V F+GAC+ PPH  ++T  C   +L  ++ + +  L+      +  +IVK  
Sbjct: 84  RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 80  GYLKTKELL 88
           GYL  K +L
Sbjct: 144 GYLHAKGIL 152

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL--ENEQFKLEPMFKNSLMHDIV 76
           +K L H ++V F+GA   PP+  ++TEY  +GSL  +L     + +L+   + S+ +D+ 
Sbjct: 88  MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 77  KFNGYLKTK 85
           K   YL  +
Sbjct: 148 KGMNYLHNR 156

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL--ENEQFKLEPMFKNSLMHDIV 76
           +K L H ++V F+GA   PP+  ++TEY  +GSL  +L     + +L+   + S+ +D+ 
Sbjct: 88  MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 77  KFNGYLKTK 85
           K   YL  +
Sbjct: 148 KGMNYLHNR 156

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	184
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-13
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	9e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-10
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-10
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	7e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-10
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-10
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	6e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	9e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-05
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	7e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	9e-04

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKR----LKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           G++VA+K  +    +     +  +++       L H +++   G CL  P+ CL+ E+  
Sbjct: 30  GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89

Query: 147 KGSLQDILENEQFKLE 162
            G L  +L  ++   +
Sbjct: 90  GGPLNRVLSGKRIPPD 105

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
              L H +++   G CL  P+ CL+ E+   G L  +L  ++   +
Sbjct: 60  FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD 105

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 76.6 bits (189), Expect = 3e-17
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 92  NKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
            +VAI+ +   R +    +    E+   +   H+++V F+GAC+ PPH  ++T  C   +
Sbjct: 56  GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115

Query: 150 LQDILENEQFKLEP 163
           L  ++ + +  L+ 
Sbjct: 116 LYSVVRDAKIVLDV 129

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 72.4 bits (178), Expect = 1e-15
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
            +   H+++V F+GAC+ PPH  ++T  C   +L  ++ + +  L+      +  +IVK 
Sbjct: 83  YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142

Query: 79  NGYL----------KTKELLKEGNKVAI 96
            GYL          K+K +  +  KV I
Sbjct: 143 MGYLHAKGILHKDLKSKNVFYDNGKVVI 170

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 75.8 bits (187), Expect = 5e-17
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKR----LKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           G+ VA+K L +   D     + E  R    +K L H ++V F+GA   PP+  ++TEY  
Sbjct: 60  GSDVAVKILMEQ--DFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117

Query: 147 KGSLQDILENEQFKLE 162
           +GSL  +L     + +
Sbjct: 118 RGSLYRLLHKSGAREQ 133

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 68.1 bits (167), Expect = 3e-14
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL--ENEQFKLEPMFKNSLMHDIV 76
           +K L H ++V F+GA   PP+  ++TEY  +GSL  +L     + +L+   + S+ +D+ 
Sbjct: 88  MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147

Query: 77  K 77
           K
Sbjct: 148 K 148

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 91  GNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCCLLTEYCP 146
           GN + +K LK        +R    E  RL+   H +++  +GAC  PP  H  L+T + P
Sbjct: 33  GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92

Query: 147 KGSLQDIL-ENEQFKLEP 163
            GSL ++L E   F ++ 
Sbjct: 93  YGSLYNVLHEGTNFVVDQ 110

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 64.6 bits (158), Expect = 5e-13
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 16  FYKLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDIL-ENEQFKLEPMFKNSLM 72
             +L+   H +++  +GAC  PP  H  L+T + P GSL ++L E   F ++        
Sbjct: 58  CPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA 117

Query: 73  HDIVK 77
            D+ +
Sbjct: 118 LDMAR 122

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLL-------ELKRLKDLHHDHLVKFIGACLDPPHCCLLTE 143
            + VAIK+L     +    ++        E+  + +L+H ++VK  G   +PP   ++ E
Sbjct: 44  KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101

Query: 144 YCPKGSLQDILENEQFKLEP 163
           + P G L   L ++   ++ 
Sbjct: 102 FVPCGDLYHRLLDKAHPIKW 121

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 67.7 bits (166), Expect = 3e-14
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           + +L+H ++VK  G   +PP   ++ E+ P G L   L ++   ++   K  LM DI  
Sbjct: 77  MSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 71.2 bits (175), Expect = 3e-15
 Identities = 19/71 (26%), Positives = 36/71 (50%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G  + +K L +   +  R  L E+K ++ L H +++KFIG          +TEY   G+L
Sbjct: 35  GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94

Query: 151 QDILENEQFKL 161
           + I+++   + 
Sbjct: 95  RGIIKSMDSQY 105

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 63.9 bits (156), Expect = 9e-13
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDI 75
           ++ L H +++KFIG          +TEY   G+L+ I+++   +     + S   DI
Sbjct: 61  MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 70.4 bits (173), Expect = 4e-15
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 92  NKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
             VA+K L  +       +    E+  L+   H +++ F+G     P   ++T++C   S
Sbjct: 47  GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSS 105

Query: 150 LQDILENEQFKLEP 163
           L   L   + K E 
Sbjct: 106 LYHHLHASETKFEM 119

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L+   H +++ F+G     P   ++T++C   SL   L   + K E      +     + 
Sbjct: 74  LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132

Query: 79  NGYL 82
             YL
Sbjct: 133 MDYL 136

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 67.1 bits (164), Expect = 9e-14
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 14  TAFYKLKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKN 69
           T  Y+   + H++++ FI A +          L+T+Y   GSL D L++     + M K 
Sbjct: 80  TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK- 138

Query: 70  SLMHDIVK 77
            L +  V 
Sbjct: 139 -LAYSSVS 145

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 64.8 bits (158), Expect = 6e-13
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP----PHCCLLTEYCP 146
           G KVA+K    +          E+ +   + H++++ FI A +          L+T+Y  
Sbjct: 60  GEKVAVKVFFTTEEASWF-RETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118

Query: 147 KGSLQDILENEQFKLEPMFK 166
            GSL D L++     + M K
Sbjct: 119 NGSLYDYLKSTTLDAKSMLK 138

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 65.8 bits (161), Expect = 2e-13
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
              VAIK ++       +  ++EL++L  ++H ++VK  GACL+P   CL+ EY   GSL
Sbjct: 31  AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 86

Query: 151 QDILENEQ 158
            ++L   +
Sbjct: 87  YNVLHGAE 94

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL--ENEQFKLEPMFKNSLMHDIV 76
           L  ++H ++VK  GACL+P   CL+ EY   GSL ++L               S      
Sbjct: 55  LSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112

Query: 77  K 77
           +
Sbjct: 113 Q 113

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 65.2 bits (159), Expect = 4e-13
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 9/95 (9%)

Query: 17  YKLKDLHHDHLVKFIGACLDPP-----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSL 71
           Y++  + HD++ +FI               L+ EY P GSL   L           +  L
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR--L 116

Query: 72  MHDIVKFNGYLKTKELLKEGNKVAI--KNLKKSRI 104
            H + +   YL T+    +  K AI  ++L    +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 8/82 (9%)

Query: 91  GNKVAIKNLKK-SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----HCCLLTEY 144
              VA+K     +R +        + R+  + HD++ +FI               L+ EY
Sbjct: 36  ERPVAVKVFSFANRQNFIN--EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93

Query: 145 CPKGSLQDILENEQFKLEPMFK 166
            P GSL   L           +
Sbjct: 94  YPNGSLXKYLSLHTSDWVSSCR 115

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 64.8 bits (158), Expect = 5e-13
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 14  TAFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKN 69
              Y+   L H++++ FI A            L+++Y   GSL D L      +E M K 
Sbjct: 85  AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK- 143

Query: 70  SLMHDIVK 77
            L      
Sbjct: 144 -LALSTAS 150

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 63.3 bits (154), Expect = 2e-12
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHCCLLTEYCP 146
           G +VA+K               E+ +   L H++++ FI A            L+++Y  
Sbjct: 65  GEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123

Query: 147 KGSLQDILENEQFKLEPMFK 166
            GSL D L      +E M K
Sbjct: 124 HGSLFDYLNRYTVTVEGMIK 143

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 64.6 bits (158), Expect = 6e-13
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC--CLLTEYCP 146
             G  VA+K L+ S  +  R    E++ LK L HD++VK+ G C         L+ EY P
Sbjct: 37  NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96

Query: 147 KGSLQDILENEQFKLEP 163
            GSL+D L+  + +++ 
Sbjct: 97  YGSLRDYLQKHKERIDH 113

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPHC--CLLTEYCPKGSLQDILENEQFKLEP 65
           LK L HD++VK+ G C         L+ EY P GSL+D L+  + +++ 
Sbjct: 65  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 64.7 bits (158), Expect = 6e-13
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC--CLLTEYCP 146
             G  VA+K L+ S  +  R    E++ LK L HD++VK+ G C         L+ EY P
Sbjct: 68  NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127

Query: 147 KGSLQDILENEQFKLEP 163
            GSL+D L+  + +++ 
Sbjct: 128 YGSLRDYLQKHKERIDH 144

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPHC--CLLTEYCPKGSLQDILENEQFKLEP 65
           LK L HD++VK+ G C         L+ EY P GSL+D L+  + +++ 
Sbjct: 96  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 64.3 bits (157), Expect = 6e-13
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 17  YKLKDLHHDHLVKFIGACL----DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLM 72
           Y    L H++++ FI + +          L+T Y   GSL D L+          +  ++
Sbjct: 54  YNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IV 111

Query: 73  HDIVK 77
             I  
Sbjct: 112 LSIAS 116

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 61.2 bits (149), Expect = 9e-12
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL----DPPHCCLLTEYCP 146
           G  VA+K    SR + +     EL     L H++++ FI + +          L+T Y  
Sbjct: 31  GENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89

Query: 147 KGSLQDILENEQFKLEPMFK 166
            GSL D L+          +
Sbjct: 90  MGSLYDYLQLTTLDTVSCLR 109

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC--CLLTEYCP 146
             G  VA+K L+ S  D  R    E++ LK LH D +VK+ G    P      L+ EY P
Sbjct: 50  NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 109

Query: 147 KGSLQDILENEQFKLEP 163
            G L+D L+  + +L+ 
Sbjct: 110 SGCLRDFLQRHRARLDA 126

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPHC--CLLTEYCPKGSLQDILENEQFKLEP 65
           LK LH D +VK+ G    P      L+ EY P G L+D L+  + +L+ 
Sbjct: 78  LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA 126

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 64.4 bits (157), Expect = 9e-13
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 17  YKLKDLHHDHLVKFIGACLDPPH----CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLM 72
           Y L  + H+++++FIGA            L+T +  KGSL D L+        +    + 
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCH--IA 127

Query: 73  HDIVK 77
             + +
Sbjct: 128 ETMAR 132

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH----CCLLTEYCP 146
              VA+K          +    E+  L  + H+++++FIGA            L+T +  
Sbjct: 47  NEYVAVKIFPIQDKQSWQ-NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105

Query: 147 KGSLQDILENEQFKLEPMFK 166
           KGSL D L+        +  
Sbjct: 106 KGSLSDFLKANVVSWNELCH 125

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 61.5 bits (150), Expect = 8e-12
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            VA+K LK++        LL E   LK ++H H++K  GAC       L+ EY   GSL+
Sbjct: 55  TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114

Query: 152 DIL 154
             L
Sbjct: 115 GFL 117

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           LK ++H H++K  GAC       L+ EY   GSL+  L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              K    VA+K LK+  +++    L E   +K++ H +LV+ +G C   P   ++TE+ 
Sbjct: 240 VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298

Query: 146 PKGSLQDIL 154
             G+L D L
Sbjct: 299 TYGNLLDYL 307

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K++ H +LV+ +G C   P   ++TE+   G+L D L
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 89  KEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPH--CCLLTEYC 145
             G  VA+K LK       R     E+  L+ L+H+H++K+ G C D       L+ EY 
Sbjct: 58  GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117

Query: 146 PKGSLQDILENEQFKL 161
           P GSL+D L      L
Sbjct: 118 PLGSLRDYLPRHSIGL 133

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 49.6 bits (119), Expect = 8e-08
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPH--CCLLTEYCPKGSLQDILENEQFKL 63
           L+ L+H+H++K+ G C D       L+ EY P GSL+D L      L
Sbjct: 87  LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL 133

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 78  FNGYLKTKELLKEGN--KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP 135
           F G  +      + +  +V +K L K+  + +         +  L H HLV   G C+  
Sbjct: 25  FKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84

Query: 136 PHCCLLTEYCPKGSLQDILENEQFKLEPM 164
               L+ E+   GSL   L+  +  +  +
Sbjct: 85  DENILVQEFVKFGSLDTYLKKNKNCINIL 113

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDI 75
           +  L H HLV   G C+      L+ E+   GSL   L+  +  +  ++K  +   +
Sbjct: 66  MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
                +KVAIK +++  +      + E + +  L H  LV+  G CL+    CL+TE+  
Sbjct: 28  YWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86

Query: 147 KGSLQDILENEQFKLEP 163
            G L D L  ++     
Sbjct: 87  HGCLSDYLRTQRGLFAA 103

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  L H  LV+  G CL+    CL+TE+   G L D L  ++     
Sbjct: 57  MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA 103

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 89  KEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHC--CLLTEYC 145
             G +VA+K+LK          L  E++ L++L+H+++VK+ G C +       L+ E+ 
Sbjct: 48  NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107

Query: 146 PKGSLQDILENEQFKLEP 163
           P GSL++ L   + K+  
Sbjct: 108 PSGSLKEYLPKNKNKINL 125

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPHC--CLLTEYCPKGSLQDILENEQFKLEP 65
           L++L+H+++VK+ G C +       L+ E+ P GSL++ L   + K+  
Sbjct: 77  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL 125

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.1 bits (144), Expect = 4e-11
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL-DPPHCCLLTEYCPKGS 149
           GNKVA+K +K       +  L E   +  L H +LV+ +G  + +     ++TEY  KGS
Sbjct: 44  GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101

Query: 150 LQDIL 154
           L D L
Sbjct: 102 LVDYL 106

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 19  LKDLHHDHLVKFIGACL-DPPHCCLLTEYCPKGSLQDIL 56
           +  L H +LV+ +G  + +     ++TEY  KGSL D L
Sbjct: 68  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 58.9 bits (143), Expect = 7e-11
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           +VA+K LK+      R  L+ ELK +  L  H+++V  +GAC       L+ EYC  G L
Sbjct: 77  QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136

Query: 151 QDIL 154
            + L
Sbjct: 137 LNYL 140

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL---ENEQFKLEPMFKNSLMHD 74
           +  L  H+++V  +GAC       L+ EYC  G L + L     +  + E  ++N    +
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161

Query: 75  IVKFNGYLKTKELLK 89
             +    L  ++LL 
Sbjct: 162 EEEDLNVLTFEDLLC 176

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 58.8 bits (143), Expect = 7e-11
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 24/136 (17%)

Query: 38  PHCCLLTEYCPKGSLQD--ILENEQFKLEPMFKNSLMHDI-------VKFNGYLKTKELL 88
           P          +   +D  +L +E   L           I       V F+G L+     
Sbjct: 91  PLTKKSGVVLHRAVPKDKWVLNHEDLVLG--------EQIGRGNFGEV-FSGRLRADNT- 140

Query: 89  KEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
                VA+K+ +++     +   L E + LK   H ++V+ IG C       ++ E    
Sbjct: 141 ----LVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196

Query: 148 GSLQDILENEQFKLEP 163
           G     L  E  +L  
Sbjct: 197 GDFLTFLRTEGARLRV 212

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 13/57 (22%), Positives = 21/57 (36%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDI 75
           LK   H ++V+ IG C       ++ E    G     L  E  +L       ++ D 
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 58.9 bits (143), Expect = 8e-11
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL-DPPHCCLLTEYCPKGS 149
           GNKVA+K +K       +  L E   +  L H +LV+ +G  + +     ++TEY  KGS
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273

Query: 150 LQDIL 154
           L D L
Sbjct: 274 LVDYL 278

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 19  LKDLHHDHLVKFIGACL-DPPHCCLLTEYCPKGSLQDIL 56
           +  L H +LV+ +G  + +     ++TEY  KGSL D L
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           KVA+K LK +     +  L+ ELK +  L  H+++V  +GAC       ++TEYC  G L
Sbjct: 78  KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137

Query: 151 QDIL 154
            + L
Sbjct: 138 LNFL 141

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +  L  H+++V  +GAC       ++TEYC  G L + L
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
            VA+K LK S     R  L+ ELK L  L +H ++V  +GAC       ++TEYC  G L
Sbjct: 55  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114

Query: 151 QDIL 154
            + L
Sbjct: 115 LNFL 118

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           L  L +H ++V  +GAC       ++TEYC  G L + L
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 58.6 bits (142), Expect = 9e-11
 Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 29/130 (22%)

Query: 38  PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN----- 92
             C  L+  C     Q   E + +++                  LK ++ L  G      
Sbjct: 160 GLCQKLSVPCMSSKPQKPWEKDAWEIPR--------------ESLKLEKKLGAGQFGEVW 205

Query: 93  --------KVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
                   KVA+K +K   + +    L E   +K L HD LVK        P   ++TE+
Sbjct: 206 MATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEF 263

Query: 145 CPKGSLQDIL 154
             KGSL D L
Sbjct: 264 MAKGSLLDFL 273

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K L HD LVK        P   ++TE+  KGSL D L
Sbjct: 237 MKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFL 273

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDP- 135
           ++G    +   +   + AIK+L +          L E   ++ L+H +++  IG  L P 
Sbjct: 38  YHGEYIDQA--QNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE 95

Query: 136 PHCCLLTEYCPKGSLQDILENEQFKL 161
               +L  Y   G L   + + Q   
Sbjct: 96  GLPHVLLPYMCHGDLLQFIRSPQRNP 121

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 19  LKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQFKL 63
           ++ L+H +++  IG  L P     +L  Y   G L   + + Q   
Sbjct: 76  MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP 121

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 22/80 (27%), Positives = 33/80 (41%)

Query: 85  KELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           K +L++G KVA+K               E++ L    H HLV  IG C +     L+ +Y
Sbjct: 57  KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

Query: 145 CPKGSLQDILENEQFKLEPM 164
              G+L+  L         M
Sbjct: 117 MENGNLKRHLYGSDLPTMSM 136

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 13/45 (28%), Positives = 18/45 (40%)

Query: 22  LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPM 66
             H HLV  IG C +     L+ +Y   G+L+  L         M
Sbjct: 92  CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            V IK ++      +   +   +  +  L H H+V+ +G C       L+T+Y P GSL 
Sbjct: 44  PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLL 102

Query: 152 DILENEQFKLEP 163
           D +   +  L P
Sbjct: 103 DHVRQHRGALGP 114

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  L H H+V+ +G C       L+T+Y P GSL D +   +  L P
Sbjct: 69  IGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP 114

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
            VA+K LK    +     L+ E++ +K +  H +++  +GAC       ++ EY  KG+L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174

Query: 151 QDIL 154
           ++ L
Sbjct: 175 REYL 178

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K +  H +++  +GAC       ++ EY  KG+L++ L
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRP--LLLELKRLKDLHHDHLVKFIGACLDPPH 137
           GY + K   K    VA+K LK    D      LL E   ++ L + ++V+ IG C     
Sbjct: 36  GYYQMK---KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW 92

Query: 138 CCLLTEYCPKGSLQDIL-ENEQFKLE 162
             L+ E    G L   L +N   K +
Sbjct: 93  -MLVMEMAELGPLNKYLQQNRHVKDK 117

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL-ENEQFKLE 64
           ++ L + ++V+ IG C       L+ E    G L   L +N   K +
Sbjct: 72  MQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK 117

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
             AIK +K+            EL+ L  L HH +++  +GAC    +  L  EY P G+L
Sbjct: 54  DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113

Query: 151 QDIL 154
            D L
Sbjct: 114 LDFL 117

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           L  L HH +++  +GAC    +  L  EY P G+L D L
Sbjct: 79  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 23/77 (29%), Positives = 33/77 (42%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH 137
           F          K+   VA+K LK   +   +    E + L +L H+H+VKF G C D   
Sbjct: 32  FLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 91

Query: 138 CCLLTEYCPKGSLQDIL 154
             ++ EY   G L   L
Sbjct: 92  LIMVFEYMKHGDLNKFL 108

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 44.5 bits (106), Expect = 6e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           L +L H+H+VKF G C D     ++ EY   G L   L
Sbjct: 71  LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
             G L+     +    VAIK LK    +  R   L E   +    H ++++  G      
Sbjct: 66  CYGRLRVPG--QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              ++TEY   GSL   L     +   
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTI 150

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +    H ++++  G         ++TEY   GSL   L     +   
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              K    VA+K LK+  +++    L E   +K++ H +LV+ +G C   P   ++TE+ 
Sbjct: 33  VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91

Query: 146 PKGSLQDIL 154
             G+L D L
Sbjct: 92  TYGNLLDYL 100

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K++ H +LV+ +G C   P   ++TE+   G+L D L
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRPL---LLELKRLKDLHHDHLVKFIGACLDPP 136
           G         +   VA+K LK   +     +   + E+  +  L H +L++  G  L PP
Sbjct: 37  GEWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP 94

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              ++TE  P GSL D L   Q     
Sbjct: 95  -MKMVTELAPLGSLLDRLRKHQGHFLL 120

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  L H +L++  G  L PP   ++TE  P GSL D L   Q     
Sbjct: 75  MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL 120

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            VAIK L+++        +L E   +  + + H+ + +G CL      L+T+  P G L 
Sbjct: 46  PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104

Query: 152 DILENEQFKLEP 163
           D +   +  +  
Sbjct: 105 DYVREHKDNIGS 116

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  + + H+ + +G CL      L+T+  P G L D +   +  +  
Sbjct: 71  MASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGS 116

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
             +    VAIK +K+  +      + E K + +L H+ LV+  G C       ++TEY  
Sbjct: 44  KWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102

Query: 147 KGSLQDILENEQFKLEP 163
            G L + L   + + + 
Sbjct: 103 NGCLLNYLREMRHRFQT 119

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           + +L H+ LV+  G C       ++TEY   G L + L   + + + 
Sbjct: 73  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT 119

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
             K    VA+K +K+  +        E + +  L H  LVKF G C       ++TEY  
Sbjct: 28  KWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86

Query: 147 KGSLQDILENEQFKLEP 163
            G L + L +    LEP
Sbjct: 87  NGCLLNYLRSHGKGLEP 103

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 17/47 (36%), Positives = 22/47 (46%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  L H  LVKF G C       ++TEY   G L + L +    LEP
Sbjct: 57  MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP 103

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G +          +VA+K L +   +      L+E   +   +H ++V+ IG  L   
Sbjct: 47  YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106

Query: 137 HCCLLTEYCPKGSLQDIL 154
              +L E    G L+  L
Sbjct: 107 PRFILMELMAGGDLKSFL 124

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +   +H ++V+ IG  L      +L E    G L+  L
Sbjct: 87  ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
            VA+K LK    +     L+ E++ +K +  H +++  +GAC       ++ EY  KG+L
Sbjct: 69  TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128

Query: 151 QDIL 154
           ++ L
Sbjct: 129 REYL 132

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K +  H +++  +GAC       ++ EY  KG+L++ L
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G+L      ++   VAIK LK       R     E      L H ++V  +G      
Sbjct: 26  YKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 85

Query: 137 HCCLLTEYCPKGSLQDIL 154
              ++  YC  G L + L
Sbjct: 86  PLSMIFSYCSHGDLHEFL 103

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 9/38 (23%), Positives = 15/38 (39%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
              L H ++V  +G         ++  YC  G L + L
Sbjct: 66  RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHC 138
           G   + E       VAIK  K    D  R   L E   ++   H H+VK IG   + P  
Sbjct: 34  GIYMSPE--NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV- 90

Query: 139 CLLTEYCPKGSLQDILENEQFKLEP 163
            ++ E C  G L+  L+  ++ L+ 
Sbjct: 91  WIIMELCTLGELRSFLQVRKYSLDL 115

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           ++   H H+VK IG   + P   ++ E C  G L+  L+  ++ L+ 
Sbjct: 70  MRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL 115

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
             G  + +   K+   VAIK LK+         ++ E + +  L + ++V+ IG C    
Sbjct: 27  RQGVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA 83

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              L+ E    G L   L  ++ ++  
Sbjct: 84  L-MLVMEMAGGGPLHKFLVGKREEIPV 109

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +  L + ++V+ IG C       L+ E    G L   L  ++ ++       L+H +   
Sbjct: 64  MHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122

Query: 79  NGYLKTK 85
             YL+ K
Sbjct: 123 MKYLEEK 129

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 56.5 bits (136), Expect = 4e-10
 Identities = 17/90 (18%), Positives = 28/90 (31%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC 139
                    K   K  +K  K +           ++RLK       +KF  A L      
Sbjct: 84  ATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143

Query: 140 LLTEYCPKGSLQDILENEQFKLEPMFKNSL 169
           L+ E    G+L + +   +   E +    L
Sbjct: 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGL 173

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 4/75 (5%)

Query: 18  KLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSL----MH 73
           +LK       +KF  A L      L+ E    G+L + +   +   E +    L      
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 74  DIVKFNGYLKTKELL 88
            ++     +   E++
Sbjct: 180 RMLYMIEQVHDCEII 194

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 56.8 bits (137), Expect = 4e-10
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHC 138
           G   + E       VAIK  K    D  R   L E   ++   H H+VK IG   + P  
Sbjct: 409 GIYMSPE--NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV- 465

Query: 139 CLLTEYCPKGSLQDILENEQFKLEP 163
            ++ E C  G L+  L+  +F L+ 
Sbjct: 466 WIIMELCTLGELRSFLQVRKFSLDL 490

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           ++   H H+VK IG   + P   ++ E C  G L+  L+  +F L+ 
Sbjct: 445 MRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL 490

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 56.2 bits (136), Expect = 4e-10
 Identities = 19/75 (25%), Positives = 38/75 (50%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           L    ++AIK + +     ++PL  E+   K L H ++V+++G+  +     +  E  P 
Sbjct: 44  LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103

Query: 148 GSLQDILENEQFKLE 162
           GSL  +L ++   L+
Sbjct: 104 GSLSALLRSKWGPLK 118

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
            K L H ++V+++G+  +     +  E  P GSL  +L ++   L+
Sbjct: 73  HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 56.6 bits (137), Expect = 4e-10
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            VA+K LK+      +     E   + +  + ++VK +G C      CLL EY   G L 
Sbjct: 79  MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138

Query: 152 DIL 154
           + L
Sbjct: 139 EFL 141

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           + +  + ++VK +G C      CLL EY   G L + L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G LKT    KE   VAIK LK    +  R   L E   +    H ++++  G      
Sbjct: 61  YKGMLKTSSGKKE-VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              ++TEY   G+L   L  +  +   
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSV 146

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +    H ++++  G         ++TEY   G+L   L  +  +   
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV 146

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G     +   E   VA+K  KK      +   + E   +K+L H H+VK IG   + P
Sbjct: 29  YEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 86

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              ++ E  P G L   LE  +  L+ 
Sbjct: 87  T-WIIMELYPYGELGHYLERNKNSLKV 112

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 44.1 bits (105), Expect = 6e-06
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +K+L H H+VK IG   + P   ++ E  P G L   LE  +  L+ 
Sbjct: 67  MKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKV 112

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           KVA+K LK    +     L+ E++ +K +  H +++  +GAC       ++ EY  KG+L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162

Query: 151 QDIL 154
           ++ L
Sbjct: 163 REYL 166

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 19  LKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K +  H +++  +GAC       ++ EY  KG+L++ L
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G  K     +   +VAIK + ++     R   L E   +K+ +  H+V+ +G      
Sbjct: 42  YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101

Query: 137 HCCLLTEYCPKGSLQDIL 154
              ++ E   +G L+  L
Sbjct: 102 PTLVIMELMTRGDLKSYL 119

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +K+ +  H+V+ +G         ++ E   +G L+  L
Sbjct: 82  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 56.4 bits (136), Expect = 5e-10
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
                 +VAIK LK   +      L E + +K L H+ LV+      + P   ++TEY  
Sbjct: 287 TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMS 344

Query: 147 KGSLQDILENEQ 158
           KGSL D L+ E 
Sbjct: 345 KGSLLDFLKGET 356

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 8   RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ 60
            + F+  A   +K L H+ LV+      + P   ++TEY  KGSL D L+ E 
Sbjct: 306 PEAFLQEAQV-MKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGET 356

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 56.2 bits (136), Expect = 6e-10
 Identities = 20/77 (25%), Positives = 32/77 (41%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH 137
           F          ++   VA+K LK++     +    E + L  L H H+V+F G C +   
Sbjct: 58  FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117

Query: 138 CCLLTEYCPKGSLQDIL 154
             ++ EY   G L   L
Sbjct: 118 LLMVFEYMRHGDLNRFL 134

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           L  L H H+V+F G C +     ++ EY   G L   L
Sbjct: 97  LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 56.2 bits (136), Expect = 6e-10
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
           + G +          +VA+K L +   +      L+E   +   +H ++V+ IG  L   
Sbjct: 88  YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147

Query: 137 HCCLLTEYCPKGSLQDIL 154
              +L E    G L+  L
Sbjct: 148 PRFILLELMAGGDLKSFL 165

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +   +H ++V+ IG  L      +L E    G L+  L
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
                 KVA+K+LK+  +      L E   +K L H  LV+        P   ++TEY  
Sbjct: 33  YYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYME 90

Query: 147 KGSLQDIL 154
            GSL D L
Sbjct: 91  NGSLVDFL 98

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 19 LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
          +K L H  LV+        P   ++TEY   GSL D L
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL 98

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 55.9 bits (135), Expect = 9e-10
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 87  LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
                 +VAIK LK   +      L E + +K L H+ LV+      + P   ++TEY  
Sbjct: 204 TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMS 261

Query: 147 KGSLQDIL 154
           KGSL D L
Sbjct: 262 KGSLLDFL 269

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 8   RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
            + F+  A   +K L H+ LV+      + P   ++TEY  KGSL D L
Sbjct: 223 PEAFLQEAQV-MKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL 269

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.3 bits (133), Expect = 1e-09
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 80  GYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHC 138
           G  + +   K+   VAIK LK+         ++ E + +  L + ++V+ IG C      
Sbjct: 355 GVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL- 410

Query: 139 CLLTEYCPKGSLQDILENEQFKLEP 163
            L+ E    G L   L  ++ ++  
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPV 435

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDI 75
           +  L + ++V+ IG C       L+ E    G L   L  ++ ++       L+H +
Sbjct: 390 MHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 445

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 93  KVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            VAIK L+++        +L E   +  + + H+ + +G CL      L+T+  P G L 
Sbjct: 46  PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 104

Query: 152 DILENEQFKLEP 163
           D +   +  +  
Sbjct: 105 DYVREHKDNIGS 116

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  + + H+ + +G CL      L+T+  P G L D +   +  +  
Sbjct: 71  MASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGS 116

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDPP 136
            +G LK     K+   VAIK LK    +  R   L E   +    H ++++  G      
Sbjct: 62  CSGRLKLPS--KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEP 163
              ++TEY   GSL   L     +   
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV 146

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           +    H ++++  G         ++TEY   GSL   L     +   
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G + A+K     ++ L    + EL     L    +V   GA  + P   +  E    GSL
Sbjct: 83  GFQCAVK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137

Query: 151 QDILEN 156
             +++ 
Sbjct: 138 GQLIKQ 143

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 9/40 (22%), Positives = 15/40 (37%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
              L    +V   GA  + P   +  E    GSL  +++ 
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ 143

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDL-HHDHLVKFIGACLDP 135
                   +       VA+K LK+         L+ ELK L  + HH ++V  +GAC  P
Sbjct: 44  IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103

Query: 136 -PHCCLLTEYCPKGSLQDIL 154
                ++ E+C  G+L   L
Sbjct: 104 GGPLMVIVEFCKFGNLSTYL 123

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 19  LKDL-HHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIV 76
           L  + HH ++V  +GAC  P     ++ E+C  G+L   L ++       F    +    
Sbjct: 84  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK----RNEFVPYKVAPED 139

Query: 77  KFNGYLKTKELLKEGNKVA 95
            +  +L  + L+    +VA
Sbjct: 140 LYKDFLTLEHLICYSFQVA 158

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP--LLLELKRLKDLHHDHLVKFIGACLD- 134
               LK ++      KVA+K LK   I  +     L E   +K+  H H+ K +G  L  
Sbjct: 40  REAQLKQED--GSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97

Query: 135 -----PPHCCLLTEYCPKGSLQDIL 154
                 P   ++  +   G L   L
Sbjct: 98  RAKGRLPIPMVILPFMKHGDLHAFL 122

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 8/66 (12%)

Query: 19  LKDLHHDHLVKFIGACLD------PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLM 72
           +K+  H H+ K +G  L        P   ++  +   G L   L   +    P   N  +
Sbjct: 79  MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP--FNLPL 136

Query: 73  HDIVKF 78
             +V+F
Sbjct: 137 QTLVRF 142

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDP- 135
           ++G L   +   +    A+K+L +          L E   +KD  H +++  +G CL   
Sbjct: 42  YHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 99

Query: 136 PHCCLLTEYCPKGSLQDILENEQFKL 161
               ++  Y   G L++ + NE    
Sbjct: 100 GSPLVVLPYMKHGDLRNFIRNETHNP 125

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 19  LKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQFKL 63
           +KD  H +++  +G CL       ++  Y   G L++ + NE    
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 125

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 53.6 bits (129), Expect = 4e-09
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP-LLLELKRLKDLHHDHLVKFIGACLDP- 135
           ++G L   +   +    A+K+L +          L E   +KD  H +++  +G CL   
Sbjct: 106 YHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 163

Query: 136 PHCCLLTEYCPKGSLQDILENEQFKL 161
               ++  Y   G L++ + NE    
Sbjct: 164 GSPLVVLPYMKHGDLRNFIRNETHNP 189

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 19  LKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQFKL 63
           +KD  H +++  +G CL       ++  Y   G L++ + NE    
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 189

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKK--SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD- 134
             G LK ++      KVA+K +K   S        L E   +KD  H ++++ +G C++ 
Sbjct: 51  MEGNLKQED--GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108

Query: 135 ----PPHCCLLTEYCPKGSLQDILENEQFKLEP 163
                P   ++  +   G L   L   + +  P
Sbjct: 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP 141

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 19  LKDLHHDHLVKFIGACLD-----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMH 73
           +KD  H ++++ +G C++      P   ++  +   G L   L   + +  P  K+  + 
Sbjct: 90  MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP--KHIPLQ 147

Query: 74  DIVKF 78
            ++KF
Sbjct: 148 TLLKF 152

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----HCCLLTE 143
           L +G+  A+K +             E    +  +H ++++ +  CL          LL  
Sbjct: 51  LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110

Query: 144 YCPKGSLQDILENEQFKLEPM 164
           +  +G+L + +E  + K   +
Sbjct: 111 FFKRGTLWNEIERLKDKGNFL 131

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 19  LKDLHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPM 66
            +  +H ++++ +  CL          LL  +  +G+L + +E  + K   +
Sbjct: 80  HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 90  EGNKVAIKNLKKSRID----LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
               VA+K L          L +    E+K +    H++LV+ +G   D    CL+  Y 
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112

Query: 146 PKGSLQDIL 154
           P GSL D L
Sbjct: 113 PNGSLLDRL 121

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
           +    H++LV+ +G   D    CL+  Y P GSL D L
Sbjct: 84  MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 88  LKEGNKVAIKNLK-KSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           L +G  VA+K LK +           E++ +    H +L++  G C+ P    L+  Y  
Sbjct: 51  LADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA 110

Query: 147 KGSLQDIL 154
            GS+   L
Sbjct: 111 NGSVASCL 118

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 22  LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL 56
             H +L++  G C+ P    L+  Y   GS+   L
Sbjct: 84  AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 89  KEGNKVAIKNLKKSRIDL--TRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           ++G +  IK +  SR+          E+  L ++ H ++V++  +  +     ++ +YC 
Sbjct: 47  EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106

Query: 147 KGSLQDILENEQFKLEP 163
            G L   +  ++  L  
Sbjct: 107 GGDLFKRINAQKGVLFQ 123

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 8/47 (17%), Positives = 22/47 (46%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP 65
           L ++ H ++V++  +  +     ++ +YC  G L   +  ++  L  
Sbjct: 77  LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 14/89 (15%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC---------- 138
            +    AIK ++ +   L+  +L E+  L  L+H ++V++  A L+  +           
Sbjct: 29  LDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87

Query: 139 ---CLLTEYCPKGSLQDILENEQFKLEPM 164
               +  EYC  G+L D++ +E    +  
Sbjct: 88  STLFIQMEYCENGTLYDLIHSENLNQQRD 116

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 49.5 bits (118), Expect = 1e-07
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKS-RIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDP 135
                   +       VA+K LK+       R L+ ELK L  + HH ++V  +GAC  P
Sbjct: 39  IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98

Query: 136 PH-CCLLTEYCPKGSLQDILENEQFKLEP 163
                ++ E+C  G+L   L +++ +  P
Sbjct: 99  GGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 23  HHDHLVKFIGACLDPPH-CCLLTEYCPKGSLQDILENEQFKLEP 65
           HH ++V  +GAC  P     ++ E+C  G+L   L +++ +  P
Sbjct: 84  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 89  KEGNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHCCLLT 142
           +   +VA      +K      +    E + LK L H ++V+F  +            L+T
Sbjct: 49  ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108

Query: 143 EYCPKGSLQDILEN 156
           E    G+L+  L+ 
Sbjct: 109 ELMTSGTLKTYLKR 122

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 19  LKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILEN 58
           LK L H ++V+F  +            L+TE    G+L+  L+ 
Sbjct: 79  LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR 122

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 16/72 (22%), Positives = 32/72 (44%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G   A K ++    +     ++E++ L    H ++VK +GA        ++ E+CP G++
Sbjct: 44  GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103

Query: 151 QDILENEQFKLE 162
             I+      L 
Sbjct: 104 DAIMLELDRGLT 115

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
           L    H ++VK +GA        ++ E+CP G++  I+      L 
Sbjct: 70  LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT 115

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.4 bits (115), Expect = 3e-07
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 91  GNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           G  V ++  NL+    ++   L  EL   K  +H ++V +    +      ++T +   G
Sbjct: 52  GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111

Query: 149 SLQDILEN 156
           S +D++  
Sbjct: 112 SAKDLICT 119

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN 58
            K  +H ++V +    +      ++T +   GS +D++  
Sbjct: 80  SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT 119

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 13/88 (14%)

Query: 89  KEGNKVAIKNLKKSRIDLTR-PLLLELKRLKDLHHDHLVKFIGACLDPPHC--------- 138
            +    AIK ++    +L R  ++ E+K L  L H  +V++  A L+             
Sbjct: 28  VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87

Query: 139 ---CLLTEYCPKGSLQDILENEQFKLEP 163
               +  + C K +L+D +       E 
Sbjct: 88  VYLYIQMQLCRKENLKDWMNGRCTIEER 115

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 88  LKEGNKVAIKNLKKSRIDLT--RPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEY 144
             +G   AIK  KK        +  L E+     L  H H+V++  A  +  H  +  EY
Sbjct: 33  RLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY 92

Query: 145 CPKGSLQDILENEQFKLEPM 164
           C  GSL D +      +   
Sbjct: 93  CNGGSLADAISENYRIMSYF 112

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 22  LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPM 66
             H H+V++  A  +  H  +  EYC  GSL D +      +   
Sbjct: 68  GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 112

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 91  GNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
               A K + KS +        + +E+   + L H H+V F G   D     ++ E C +
Sbjct: 40  KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99

Query: 148 GSLQDIL 154
            SL ++ 
Sbjct: 100 RSLLELH 106

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 13/70 (18%), Positives = 33/70 (47%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G +VAI+ +   +      ++ E+  +++  + ++V ++ + L      ++ EY   GSL
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Query: 151 QDILENEQFK 160
            D++      
Sbjct: 105 TDVVTETCMD 114

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFK 62
           +++  + ++V ++ + L      ++ EY   GSL D++      
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD 114

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 16/70 (22%), Positives = 32/70 (45%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G +VA+K +   +      L  E+  ++D  H ++V+   + L      +L E+   G+L
Sbjct: 70  GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129

Query: 151 QDILENEQFK 160
            DI+   +  
Sbjct: 130 TDIVSQVRLN 139

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFK 62
           ++D  H ++V+   + L      +L E+   G+L DI+   +  
Sbjct: 96  MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLN 139

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 91  GNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
               A K + KS +        + +E+   + L H H+V F G   D     ++ E C +
Sbjct: 66  KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125

Query: 148 GSLQDIL 154
            SL ++ 
Sbjct: 126 RSLLELH 132

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 88  LKEGNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
             +  KVAIK  NL+K +  +   LL E++ +   HH ++V +  + +      L+ +  
Sbjct: 37  APKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 95

Query: 146 PKGSLQDIL 154
             GS+ DI+
Sbjct: 96  SGGSVLDII 104

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 91  GNKVAIK--NLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
              VAIK  +L+++  ++   +  E+  L      ++ K+ G+ L      ++ EY   G
Sbjct: 47  QKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105

Query: 149 SLQDILENEQFK 160
           S  D+LE     
Sbjct: 106 SALDLLEPGPLD 117

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFK 62
           L      ++ K+ G+ L      ++ EY   GS  D+LE     
Sbjct: 74  LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD 117

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGA--CLDPPHCCLLTEYCPK 147
           G+  AIK            + + E + LK L+H ++VK           H  L+ E+CP 
Sbjct: 34  GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93

Query: 148 GSLQDILE 155
           GSL  +LE
Sbjct: 94  GSLYTVLE 101

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 13/85 (15%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRP--------LLLELKRLKDLHHDHLVKFIGACLDPPHCC 139
           L +G  VA+K     ++ +            + E+  LK L+H +++K+  + ++     
Sbjct: 54  LLDGVPVALK-----KVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108

Query: 140 LLTEYCPKGSLQDILENEQFKLEPM 164
           ++ E    G L  ++++ + +   +
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLI 133

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 8/48 (16%), Positives = 25/48 (52%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPM 66
           LK L+H +++K+  + ++     ++ E    G L  ++++ + +   +
Sbjct: 86  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
             + A K + K  ++       E++ +K L H ++++      D     L+ E C  G L
Sbjct: 34  RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93

Query: 151 QD-ILENEQF 159
            + ++    F
Sbjct: 94  FERVVHKRVF 103

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           GN  A K +          +  E++ +  L H  LV    A  D     ++ E+   G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241

Query: 151 QDILENEQFKL 161
            + + +E  K+
Sbjct: 242 FEKVADEHNKM 252

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPK 147
            +G  VA+K +     D+    L+E+K L +   H +++++  +        +  E C  
Sbjct: 37  FQGRPVAVKRMLIDFCDI---ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92

Query: 148 GSLQDILENEQFKLEPMFKNS 168
            +LQD++E++    E +    
Sbjct: 93  LNLQDLVESKNVSDENLKLQK 113

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 89  KEGNKVAIKNLKKSRIDL--TRPLLLELKRLKDLHHDHLVKFIGACLDPPHC--CLLTEY 144
            +G  +  K L    +     + L+ E+  L++L H ++V++    +D  +    ++ EY
Sbjct: 29  SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88

Query: 145 CPKGSLQDILENEQFKLEPM 164
           C  G L  ++     + + +
Sbjct: 89  CEGGDLASVITKGTKERQYL 108

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 91  GNKVAIKNLKKSRIDLT---RPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           G  VAIK     ++ +    + ++ E+  ++     H+VK+ G+        ++ EYC  
Sbjct: 54  GQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108

Query: 148 GSLQDILENEQFKLE 162
           GS+ DI+      L 
Sbjct: 109 GSVSDIIRLRNKTLT 123

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
           ++     H+VK+ G+        ++ EYC  GS+ DI+      L 
Sbjct: 78  MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT 123

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 44.5 bits (105), Expect = 5e-06
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGA--CLDPPHCCLLTEYCPK 147
           G+  AIK            + + E + LK L+H ++VK           H  L+ E+CP 
Sbjct: 34  GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93

Query: 148 GSLQDILE 155
           GSL  +LE
Sbjct: 94  GSLYTVLE 101

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC---------- 138
            +G    IK +K +     R    E+K L  L H ++V + G      +           
Sbjct: 34  IDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89

Query: 139 ------CLLTEYCPKGSLQDILENEQFKL 161
                  +  E+C KG+L+  +E  + + 
Sbjct: 90  SKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 84  TKELLKEGNKV-AIKNLKKSRIDLT------RPLLLELKRLKDLHHDHLVKFIGACLDPP 136
            K   K    V A K      I L         ++ EL+ L + +  ++V F GA     
Sbjct: 50  FKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 104

Query: 137 HCCLLTEYCPKGSLQDIL 154
              +  E+   GSL  +L
Sbjct: 105 EISICMEHMDGGSLDQVL 122

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L + +  ++V F GA        +  E+   GSL  +L+      E +    +   ++K 
Sbjct: 85  LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG 143

Query: 79  NGYLKTK 85
             YL+ K
Sbjct: 144 LTYLREK 150

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 43.9 bits (104), Expect = 9e-06
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 91  GNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           G + A+K + K ++        LL E++ LK L H +++K      D  +  L+ E    
Sbjct: 51  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110

Query: 148 GSLQD-ILENEQF 159
           G L D I+  ++F
Sbjct: 111 GELFDEIISRKRF 123

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLL--ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
             + AIK ++K+ +  +    L  E+  LK L H +++K      D  +  L+ E    G
Sbjct: 62  HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121

Query: 149 SLQD-ILENEQF 159
            L D I+   +F
Sbjct: 122 ELFDEIIHRMKF 133

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 91  GNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
             + A+K + K+      T  +L E++ LK L H +++K      D     ++ E    G
Sbjct: 47  QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106

Query: 149 SLQD-ILENEQF 159
            L D I++ ++F
Sbjct: 107 ELFDEIIKRKRF 118

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPK 147
            +   VA+K +             E++ L++   H +++++     D     +  E C  
Sbjct: 46  FDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101

Query: 148 GSLQDILENEQFKLE 162
            +LQ+ +E + F   
Sbjct: 102 ATLQEYVEQKDFAHL 116

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 91  GNKVAIKNLKKSRIDLTRP-----LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
               AIK + K++I    P     +  E++ +K LHH ++ +      D  + CL+ E C
Sbjct: 51  RAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110

Query: 146 PKGSLQD 152
             G L D
Sbjct: 111 HGGHLLD 117

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH--------C 138
           +  G + A+K L  +  +  R ++ E+  +K L  H ++V+F  A               
Sbjct: 50  VGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109

Query: 139 CLLTEYCPKGSLQDILENEQFK 160
            LLTE C  G L + L+  + +
Sbjct: 110 LLLTELCK-GQLVEFLKKMESR 130

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 91  GNKVAIKNLK---KSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
              VAIK +    K   +  + ++ E++ L+ L H + +++ G  L      L+ EYC  
Sbjct: 79  SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137

Query: 148 GSLQDILENEQFKLE 162
           GS  D+LE  +  L+
Sbjct: 138 GSASDLLEVHKKPLQ 152

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 14/83 (16%)

Query: 91  GNKVAIKNLKKSRIDLTRP-------------LLLELKRLKDLHHDHLVKFIGACLDPPH 137
            ++ AIK +KKS+ D  R              +  E+  LK L H +++K      D  +
Sbjct: 61  HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120

Query: 138 CCLLTEYCPKGSLQD-ILENEQF 159
             L+TE+   G L + I+   +F
Sbjct: 121 FYLVTEFYEGGELFEQIINRHKF 143

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 17/75 (22%), Positives = 23/75 (30%), Gaps = 4/75 (5%)

Query: 91  GNKVAIKNLKKSRIDLT--RPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPK 147
           G   A+K               L E+   + +  H   V+   A  +     L TE C  
Sbjct: 82  GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140

Query: 148 GSLQDILENEQFKLE 162
            SLQ   E     L 
Sbjct: 141 PSLQQHCEAWGASLP 155

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G   A+K +KKS       L  E+  LK + H+++V          H  L+ +    G L
Sbjct: 34  GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93

Query: 151 QD-ILENEQF 159
            D ILE   +
Sbjct: 94  FDRILERGVY 103

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G K+A K +K   +     +  E+  +  L H +L++   A        L+ EY   G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173

Query: 151 QD 152
            D
Sbjct: 174 FD 175

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 91  GNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
             + A+K + K+      T  +L E++ LK L H +++K      D     ++ E    G
Sbjct: 47  QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106

Query: 149 SLQD-ILENEQF 159
            L D I++ ++F
Sbjct: 107 ELFDEIIKRKRF 118

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 91  GNKVAIKNLKKSRIDLTRP------LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           G + A K +KK R+  +R       +  E+  L+++ H +++       +     L+ E 
Sbjct: 30  GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89

Query: 145 CPKGSLQD-ILENEQF 159
              G L D + E E  
Sbjct: 90  VSGGELFDFLAEKESL 105

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.2 bits (96), Expect = 9e-05
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 91  GNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFI------GACLDPPHCCLLTE 143
           G +VAIK  ++           LE++ +K L+H ++V                   L  E
Sbjct: 39  GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98

Query: 144 YCPKGSLQDIL 154
           YC  G L+  L
Sbjct: 99  YCEGGDLRKYL 109

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 91  GNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           G +VAIK + K  +    + + +  E+K    L H  +++      D  +  L+ E C  
Sbjct: 36  GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95

Query: 148 GSLQDIL 154
           G +   L
Sbjct: 96  GEMNRYL 102

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 7/62 (11%), Positives = 19/62 (30%), Gaps = 1/62 (1%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
                 K +K    D    +  E+  L    H +++    +        ++ E+     +
Sbjct: 30  KKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88

Query: 151 QD 152
            +
Sbjct: 89  FE 90

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
              VA+K +++        +  E+   + L H ++V+F    L P H  ++ EY   G L
Sbjct: 45  KELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103

Query: 151 QD 152
            +
Sbjct: 104 YE 105

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 91  GNKVAIKNLKKSRIDLTRP------LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           G + A K +KK R   +R       +  E+  LK++ H +++       +     L+ E 
Sbjct: 36  GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95

Query: 145 CPKGSLQD-ILENEQF 159
              G L D + E E  
Sbjct: 96  VAGGELFDFLAEKESL 111

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
           G +  IK + K R  +    +  E++ LK L H +++K      D  +  ++ E C  G 
Sbjct: 47  GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106

Query: 150 LQD-ILENEQFK 160
           L + I+  +   
Sbjct: 107 LLERIVSAQARG 118

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 17/104 (16%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLLE-------------LKR----LKDLHHDHLVKFIGA 131
           K+    A+K  +KS ++  R                   K     + D+ +++ +   G 
Sbjct: 52  KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111

Query: 132 CLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAF 175
             +     ++ EY    S+    E      +       +     
Sbjct: 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRP--LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           G + A K +   ++       L  E +  + L H ++V+   +  +     L+ +    G
Sbjct: 31  GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90

Query: 149 SLQD-ILENEQF 159
            L + I+  E +
Sbjct: 91  ELFEDIVAREFY 102

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 91  GNKVAIKNLKKSRIDLTRP------LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           G + A K +KK +   +R       +  E+  L+ + H +++       +     L+ E 
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96

Query: 145 CPKGSLQD-ILENEQF 159
              G L D + + E  
Sbjct: 97  VSGGELFDFLAQKESL 112

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 91  GNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
              VA+K +   R  D    +  E+   K L+H+++VKF G   +     L  EYC  G 
Sbjct: 32  EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91

Query: 150 LQDILEN 156
           L D +E 
Sbjct: 92  LFDRIEP 98

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 91  GNKVAIKNLKKSRIDLT------RPLLLELK-RLKDLHHDHLVKFIGACLDPPHCCLLTE 143
           G  +A+K     RI  T      + LL++L   ++ +     V F GA        +  E
Sbjct: 32  GQIMAVK-----RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86

Query: 144 YCPKGSLQDILENEQFKLEPM 164
                SL    +    K + +
Sbjct: 87  LMD-TSLDKFYKQVIDKGQTI 106

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 91  GNKVAIKNLKKSRIDLT--RPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG 148
           G +VAIK + K++++ T  + L  E++ +K L+H ++VK            L+ EY   G
Sbjct: 40  GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99

Query: 149 SLQDIL 154
            + D L
Sbjct: 100 EVFDYL 105

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 91  GNKVAIKNLKKSRIDLTRP------LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           G + A K +KK +   +R       +  E+  L+ + H +++       +     L+ E 
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96

Query: 145 CPKGSLQD-ILENEQF 159
              G L D + + E  
Sbjct: 97  VSGGELFDFLAQKESL 112

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 89  KEGNKVAIKNLKKSRID--LTRPLLLELKRLKDL--HHDHLVKFIGACLDPPHCCLLTEY 144
           ++    AIK +     D         E+  L  L  H D +++     +   +  ++ E 
Sbjct: 50  EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 109

Query: 145 CPKGSLQDILENEQ 158
                L   L+ ++
Sbjct: 110 G-NIDLNSWLKKKK 122

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 12/79 (15%)

Query: 91  GNKVAIK--NLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT----- 142
           G   AIK  ++     +    +  E+  LK   HH ++  + GA +      +       
Sbjct: 49  GQLAAIKVMDVTGDEEEE---IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 105

Query: 143 -EYCPKGSLQDILENEQFK 160
            E+C  GS+ D+++N +  
Sbjct: 106 MEFCGAGSVTDLIKNTKGN 124

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 14/62 (22%), Positives = 21/62 (33%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
           G     K +          +  E+  +  LHH  L+    A  D     L+ E+   G L
Sbjct: 76  GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135

Query: 151 QD 152
            D
Sbjct: 136 FD 137

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 91  GNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
              VA+K +   R  D    +  E+   K L+H+++VKF G   +     L  EYC  G 
Sbjct: 32  EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91

Query: 150 LQDILEN 156
           L D +E 
Sbjct: 92  LFDRIEP 98

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 89  KEGNKVAIKNLKKSRID--LTRPLLLELKRLKDL--HHDHLVKFIGACLDPPHCCLLTEY 144
           ++    AIK +     D         E+  L  L  H D +++     +   +  ++ E 
Sbjct: 31  EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 90

Query: 145 CPKGSLQDILENEQ 158
                L   L+ ++
Sbjct: 91  G-NIDLNSWLKKKK 103

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRL-KDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS 149
             + A+K + KS+ D T     E++ L +   H +++       D  +  ++TE    G 
Sbjct: 47  NMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102

Query: 150 LQD-ILENEQF 159
           L D IL  + F
Sbjct: 103 LLDKILRQKFF 113

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLE-----------LKRLKDLHHDHLVKFIGACLDPPHCC 139
           G++ A+K ++ +   L+   L E           L+++    H H++  I +        
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG--HPHIITLIDSYESSSFMF 176

Query: 140 LLTEYCPKGSLQD-ILENEQF 159
           L+ +   KG L D + E    
Sbjct: 177 LVFDLMRKGELFDYLTEKVAL 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	184
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.86
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.84
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.83
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.81
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.81
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.81
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.8
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.79
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.79
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.78
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.76
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.76
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.75
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.75
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.74
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.7
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.69
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.69
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.68
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.66
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.65
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.64
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.63
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.63
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.63
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.63
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.62
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.62
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.62
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.62
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.61
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.61
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.61
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.61
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.61
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.61
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.61
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.61
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.61
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.6
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.6
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.6
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.59
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.59
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.59
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.59
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.59
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.59
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.59
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.59
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.59
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.58
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.58
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.58
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.58
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.58
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.58
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.58
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.58
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.58
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.58
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.58
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.58
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.57
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.57
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.57
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.57
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.57
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.57
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.57
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.57
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.56
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.56
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.56
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.56
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.56
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.56
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.56
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.56
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.56
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.55
3uqc_A	286	Probable conserved transmembrane protein; structur	99.55
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.55
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.55
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.55
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.55
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.55
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.55
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.54
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.54
3bhy_A	283	Death-associated protein kinase 3; death associate	99.54
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.54
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.54
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.54
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.54
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.54
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.54
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.54
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.54
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.54
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.54
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.54
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.53
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.53
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.53
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.53
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.53
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.53
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.53
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.53
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.53
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.53
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.53
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.53
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.53
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.53
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.52
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.52
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.52
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.52
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.52
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.52
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.52
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.52
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.52
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.52
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.52
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.52
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.51
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.51
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.51
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.51
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.51
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.51
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.51
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.51
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.51
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.51
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.51
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.51
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.51
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.51
3niz_A	311	Rhodanese family protein; structural genomics, str	99.5
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.5
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.5
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.5
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.5
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.49
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.49
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.48
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.48
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.48
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.48
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.48
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.48
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.48
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.47
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.47
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.47
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.47
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.46
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.46
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.46
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.46
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.46
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.46
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.45
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.45
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.45
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.45
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.45
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.45
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.44
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.44
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.44
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.44
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.44
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.44
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.44
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.44
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.44
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.44
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.44
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.43
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.43
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.43
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.43
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.43
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.43
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.43
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.42
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.42
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.42
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.42
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.42
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.41
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.41
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.41
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.41
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.41
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.41
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.4
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.4
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.39
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.39
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.39
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.39
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.37
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.37
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.37
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.37
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.36
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.36
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.36
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.36
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.36
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.35
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.35
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.35
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.35
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.35
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.34
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.34
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.34
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.34
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.34
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.33
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.33
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.32
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.32
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.31
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.3
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.3
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.3
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.29
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.28
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.27
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.27
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.26
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.26
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.25
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.24
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.23
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.2
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.19
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.07
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.04
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.99
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.87
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.7
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.69
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.68
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.65
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.64
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.57
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.53
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.52
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	98.51
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.48
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.37
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.32
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.3
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.26
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.15
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.03
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.02
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.95
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.91
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.9
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.9
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.86
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.84
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	97.83
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	97.82
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.82
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	97.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.79
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	97.79
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.78
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.78
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.77
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.77
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.76
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.76
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.74
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.74
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.74
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.74
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.73
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.72
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.72
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.72
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.72
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.71
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.71
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.7
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.69
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.69
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	97.68
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.67
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	97.67
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.67
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	97.67
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	97.66
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	97.66
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.65
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.65
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	97.63
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	97.62
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.61
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.61
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.61
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.61
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.6
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.6
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.59
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.59
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.59
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.59
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.59
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	97.58
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	97.56
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.56
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.56
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.55
3niz_A	311	Rhodanese family protein; structural genomics, str	97.55
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.55
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.54
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.54
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.54
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	97.54
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.54
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	97.54
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.53
3bhy_A	283	Death-associated protein kinase 3; death associate	97.53
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	97.53
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	97.53
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	97.52
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.52
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.52
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	97.52
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.52
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	97.51
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.51
3uqc_A	286	Probable conserved transmembrane protein; structur	97.51
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	97.51
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	97.5
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.5
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.5
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	97.49
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.49
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	97.48
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.47
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.47
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	97.47
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	97.46
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.46
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	97.45
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	97.45
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.44
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	97.44
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.44
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.44
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.44
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.43
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	97.43
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.42
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.42
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	97.42
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.42
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	97.42
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.41
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	97.4
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	97.4
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.36
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.36
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	97.35
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	97.34
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.33
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.33
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.32
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.31
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.3
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	97.3
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	97.3
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.3
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	97.29
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.29
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	97.28
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	97.27
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.26
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.25
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	97.25
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	97.25
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	97.25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.24
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.24
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	97.24
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.23
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	97.22
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.21
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	97.21
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	97.21
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.21
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.19
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	97.18
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	97.18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.17
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.15
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	97.15
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.15
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	97.14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	97.13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	97.13
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.12
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	97.09
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	97.02
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	97.02
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.99
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.97
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	96.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	96.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	96.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	96.96
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	96.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	96.92
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.91
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	96.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	96.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.81
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	96.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	96.81
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	96.78
3q4u_A	301	Activin receptor type-1; structural genomics conso	96.77
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.75
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.72
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	96.69
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	96.68
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.67
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.66
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	96.62
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.6
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	96.6
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	96.55
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.47
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.38
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	96.38
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.34
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.32
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.3
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.29
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	96.24
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.22
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.17
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.17
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	96.14
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	96.13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.1
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.07
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	96.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	95.99
3an0_A	340	Dual specificity mitogen-activated protein kinase;	95.88
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	95.85
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	95.75
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	95.74
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	95.74
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	95.64
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.57
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	95.54
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	95.53
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	95.53
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	95.51
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	95.45
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.36

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.86  E-value=1.2e-21  Score=145.32  Aligned_cols=121  Identities=21%  Similarity=0.242  Sum_probs=100.2

Q ss_pred             Cccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ..+.+.+.+.++.|++|.||++.+.+   ..++..||+|.++.......++|.+|+.++++++||||++++|+|.+++..
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            34567777889999999999986332   235779999999876655567899999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQ------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+|||||++|+|.++|++.+            ..+++.+++.++.|||+||+-+++
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  146 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS  146 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999997532            468999999999999999996654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.85  E-value=3.3e-21  Score=144.69  Aligned_cols=120  Identities=19%  Similarity=0.179  Sum_probs=101.0

Q ss_pred             ccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+.+.+.+.++.|++|.||++.+.+   ..++..||||.++.......++|.+|+.++++++||||++++|+|.+++..|
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3456667789999999999986432   2457899999998766666778999999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ--------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~--------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||||++|+|.+++++..              ..+++.+++.++.|||+||+-+++
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  176 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG  176 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999997532              358999999999999999996654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.84  E-value=1.2e-20  Score=140.46  Aligned_cols=122  Identities=20%  Similarity=0.141  Sum_probs=98.8

Q ss_pred             cCccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      .....+.+.+.++.|++|.||++.+.+   ...++.||||.++.... ...+.|.+|+.++++++||||++++|+|.+++
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  102 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ  102 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence            345556677889999999999986432   23567999999976533 33567999999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENE---------------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~---------------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++|||||++|+|.++|...               ...+++.+++.++.|||+||+-+++
T Consensus       103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  163 (308)
T 4gt4_A          103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS  163 (308)
T ss_dssp             SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999643               2358999999999999999995544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.83  E-value=3.1e-20  Score=140.04  Aligned_cols=117  Identities=13%  Similarity=0.160  Sum_probs=95.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ++.|.+.+.++.|++|.||++.  ...+|+.||+|.++....  ...+.+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi  100 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVK--STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI  100 (350)
T ss_dssp             CCCEEEEEEC------CEEEEE--ETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEE--ECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence            4668888899999999999987  567799999999986543  335678999999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||||++|+|.++|... ...+++.+...++.||+.||+-++
T Consensus       101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH  142 (350)
T 4b9d_A          101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH  142 (350)
T ss_dssp             EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999754 345789999999999999998544

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.81  E-value=4e-20  Score=137.30  Aligned_cols=117  Identities=15%  Similarity=0.085  Sum_probs=102.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ..+.|.+.+.++.|++|.||++.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~--~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  107 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL  107 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEecccCeEEEEEE--ECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            44668888999999999999987  667899999999986543   2346688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+|||||++|+|.+++.+.+ .+++.+...++.||+.||+-.|
T Consensus       108 yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH  149 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH  149 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998754 6899999999999999998544

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.81  E-value=3.9e-20  Score=139.29  Aligned_cols=114  Identities=14%  Similarity=0.140  Sum_probs=100.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..|+..+.++.|++|.||++.  ...+|+.||+|.++.......+.+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~--~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE  151 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIAT--VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  151 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             HhcEEeEEeecCcCeEEEEEE--ECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            346666779999999999987  556799999999987655556678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|+|.+++.+.  .+++.+...++.||+.||+-.+
T Consensus       152 y~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH  187 (346)
T 4fih_A          152 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH  187 (346)
T ss_dssp             CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999764  4899999999999999998544

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=134.58  Aligned_cols=115  Identities=16%  Similarity=0.141  Sum_probs=96.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+.+.+.++.|++|.||++.    +. ..||||+++....  ...+.|.+|+.++++++||||++++|++.. +.++
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~----~~-~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~  107 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGK----WH-GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA  107 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEE----SS-SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEE----EC-CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence            34556777889999999999875    23 3699999975432  345679999999999999999999998764 5689


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||||++|+|.++|......+++.++..++.|||+||+-+++
T Consensus       108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~  150 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA  150 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998766679999999999999999996654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.80  E-value=8.3e-20  Score=140.71  Aligned_cols=114  Identities=14%  Similarity=0.140  Sum_probs=100.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..|...+.+|.|++|.||++.  ...+|+.||+|.++.......+.+.+|+.+|+.++||||+++++++.+.+.+|+|||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~--~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIAT--VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEE--ECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence            346677789999999999987  566799999999987655556678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|+|.+++...  .+++.+...++.||+.||+.+|
T Consensus       229 y~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH  264 (423)
T 4fie_A          229 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH  264 (423)
T ss_dssp             CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999764  4899999999999999999544

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.79  E-value=2.7e-19  Score=131.94  Aligned_cols=113  Identities=16%  Similarity=0.084  Sum_probs=95.4

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec----CCcEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHCCL  140 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~~~l  140 (184)
                      .+.+.++.|++|.||++.  ...++..||+|.+.....  ...+.+.+|+.+++.++||||+++++++.+    .+.+|+
T Consensus        29 ~~~~~iG~G~fg~Vy~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEE--ECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            455668999999999986  556788999999976543  335678999999999999999999998865    356899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||||++|+|.+++.+.+ .+++.....++.||++||+.+|+
T Consensus       107 vmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~  147 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT  147 (290)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998754 68999999999999999997664

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.79  E-value=1.8e-19  Score=135.20  Aligned_cols=113  Identities=15%  Similarity=0.052  Sum_probs=98.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+++...+.++.|++|.||++.  ...+|+.||+|.++....     ..+|+.+++.++||||+++++++.+++.+|+|
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~--~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMK--DKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEE--ECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            34567777889999999999987  567799999999986532     24799999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||++|+|.++|++.+ .+++.....++.||+.||+-+|+
T Consensus       129 mEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~  168 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT  168 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998755 68999999999999999996553

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.78  E-value=4.4e-19  Score=129.84  Aligned_cols=116  Identities=16%  Similarity=0.155  Sum_probs=94.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.++.|++|.||++.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++++.+.+.+
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEE--CTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            45678888999999999999986  556799999999976543   2345688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+||||+ +|+|.+++.+.+ .+++.+...++.||+.||+-.+
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH  129 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH  129 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999 679999998754 6899999999999999998443

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.76  E-value=2.7e-19  Score=132.72  Aligned_cols=119  Identities=16%  Similarity=0.034  Sum_probs=94.9

Q ss_pred             Cccccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +.+.|.+.+.++.|++|.||++... +..+++.||+|.++....  .....+.+|+.+++.++||||+++++++.+++.+
T Consensus        22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred             CccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            4466888899999999999987511 123578999999986543  2244678899999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+|||||++|+|.+++.+.+ .+++.+...++.||+.||+-.+
T Consensus       102 ~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH  143 (304)
T 3ubd_A          102 YLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH  143 (304)
T ss_dssp             EEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998755 6899999999999999998544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.76  E-value=2e-18  Score=128.38  Aligned_cols=110  Identities=17%  Similarity=0.078  Sum_probs=89.7

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC----cEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----HCCLL  141 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----~~~lv  141 (184)
                      +.+.+.++.|++|.||++.    ++|+.||||.++..... ...+..|+..+..++||||++++|++..++    .+|+|
T Consensus         5 i~L~~~iG~G~fG~Vy~~~----~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGK----WRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEE----ETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEE----ECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            5566789999999999864    68999999999765422 222345666677889999999999987643    57999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||++|+|.++|+..  .+++..+..++.|+|+||+-+|+
T Consensus        80 ~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~  118 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM  118 (303)
T ss_dssp             EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred             ecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864  48899999999999999997764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.75  E-value=2.6e-18  Score=137.67  Aligned_cols=117  Identities=16%  Similarity=0.065  Sum_probs=102.8

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      ++.|.+.+.++.|++|.||++.  ...+|+.||+|.++.......+.+.+|+.+|+.++||||+++++++.+.+.+|++|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~--~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~  233 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVT--ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  233 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEE--ECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            3567778889999999999886  56689999999998766555667889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||++|+|.++|.+....+++.+...++.||++||..+|
T Consensus       234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH  272 (573)
T 3uto_A          234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH  272 (573)
T ss_dssp             ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999766557899999999999999998543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.75  E-value=3.1e-18  Score=126.99  Aligned_cols=115  Identities=15%  Similarity=0.076  Sum_probs=92.0

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC-------
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-------  136 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-------  136 (184)
                      .|.+.+.++.|++|.||.+.  ...+|+.||+|.++.... ...+.+.+|+.+++.++||||+++++++...+       
T Consensus         6 dy~~~~~lG~G~fg~V~~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAK--NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEE--ETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hCEEeeEEecCCCeEEEEEE--ECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            35666889999999999986  556789999999976543 33567899999999999999999999886543       


Q ss_pred             -----cEEEEEeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 -----HCCLLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 -----~~~lv~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                           .+|++||||++|+|.+++....  ...++.....++.||++||+-.|
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH  135 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH  135 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence                 3799999999999999998643  23456778899999999998544

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.74  E-value=2.8e-18  Score=129.89  Aligned_cols=122  Identities=20%  Similarity=0.148  Sum_probs=98.2

Q ss_pred             cCccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCC-cchhhhheeeec-
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHH-DHLVKFIGACLD-  134 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h-~ni~~l~~~~~~-  134 (184)
                      ...+.+.+.+.++.|++|.||.+.+.+   ...++.||+|.++.... ...+.+.+|+.++.++.| |||++++|+|.. 
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~  140 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  140 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence            345667888899999999999986332   22346899999986543 335679999999999975 899999999876 


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++.+++|||||++|+|.++|++..               ..+++..+..++.|||+||+-+++
T Consensus       141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~  203 (353)
T 4ase_A          141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS  203 (353)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh
Confidence            467899999999999999997532               347899999999999999985544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.70  E-value=5.2e-17  Score=128.25  Aligned_cols=117  Identities=19%  Similarity=0.242  Sum_probs=99.8

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ....+.+.+.++.|++|.||.+.  ....+..||+|.++..... .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~--~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGV--WKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEE--EGGGTEEEEEEECCSSSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEE--EcCCCeEEEEEEecCcccc-hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            44567778889999999999876  3345789999999865433 56799999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++... ...+++..+..++.||++||+.++
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH  335 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE  335 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864 346889999999999999998543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.69  E-value=6.2e-17  Score=124.38  Aligned_cols=114  Identities=15%  Similarity=0.062  Sum_probs=95.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec------C
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD------P  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~------~  135 (184)
                      +.|.+.+.+|.|++|.||++.  ...+|+.||+|.++....  ...+.+.+|+.+|+.++||||+++++++..      .
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~--~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSAR--RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CCeEEEEEEecccCeEEEEEE--ECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            357788899999999999987  667899999999975432  334568899999999999999999998653      3


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +.+|+|||||+ |+|.+++.+.+ .+++.....++.||+.||+..|
T Consensus       132 ~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH  175 (398)
T 4b99_A          132 KSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH  175 (398)
T ss_dssp             CCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            67899999996 67999997654 6899999999999999998554

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.69  E-value=8.7e-17  Score=129.76  Aligned_cols=120  Identities=13%  Similarity=0.021  Sum_probs=100.4

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHH---HHHHHHcCCCcchhhhheeee
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLL---ELKRLKDLHHDHLVKFIGACL  133 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~---e~~~l~~l~h~ni~~l~~~~~  133 (184)
                      .+.++.|.+...+|.|++|.||++.  ...+|+.||+|+++.....   .......   ++.+++.++||||+++++++.
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~--~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~  262 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCR--KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH  262 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred             CCchHHeEEEEEEecccCeEEEEEE--ECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence            4678889999999999999999987  5678999999999865431   1222333   356677889999999999999


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+.+|+|||||+||+|..+|.+.+ .+++.....++.||+.||+-+|+
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~  310 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN  310 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998755 68999999999999999995543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.68  E-value=1.6e-16  Score=118.09  Aligned_cols=118  Identities=19%  Similarity=0.225  Sum_probs=103.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+...+.++.|++|.+|.+.  ...++..||+|.+..........+.+|+.++..++||||+++++++.+.+..++|
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~--~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   85 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVT--HRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI   85 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEE--ETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ChhHeeccceecCCCCEEEEEEE--ECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence            45667778889999999999876  4456889999998766555567899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++......+++.++..++.|+++||+..+
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  125 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH  125 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999886667899999999999999998544

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.66  E-value=4.1e-16  Score=117.12  Aligned_cols=120  Identities=19%  Similarity=0.164  Sum_probs=102.3

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....+..|.+.+.++.|++|.||.+.  ...+|+.||+|.++....  ...+.+.+|+.+++.++||||+++++.+...+
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   87 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLAR--HILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK   87 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34456678888999999999999876  557899999999976533  33556889999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|.+++...+ .+++.....++.|+++||+..+
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH  131 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH  131 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997654 5889999999999999998443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.65  E-value=1.3e-15  Score=111.97  Aligned_cols=118  Identities=19%  Similarity=0.220  Sum_probs=101.2

Q ss_pred             CccccccchhhhhhcccceeeecceeeecC-------cEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEG-------NKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~  134 (184)
                      ..+.+.+.+.++.|++|.+|.+.  ....+       ..||+|.++.......+.+.+|+.+++.++||||+++++.+..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE--EEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             chhHeeeeeeeccCCCceEEEEE--EecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            44567777889999999999886  33333       5799999987665556789999999999999999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++..+++|||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH  130 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE  130 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999877666899999999999999998543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.64  E-value=3.5e-16  Score=122.18  Aligned_cols=114  Identities=22%  Similarity=0.225  Sum_probs=96.8

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-cEE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCC  139 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-~~~  139 (184)
                      ...+.+.+.+.++.|++|.||.+.    +.|+.||+|.++...  ..+.+.+|+.+++.++||||+++++.+...+ ..+
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~----~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  263 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGD----YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY  263 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEE----ETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEE----ecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence            345667778889999999998754    678899999998654  3567999999999999999999999987654 799


Q ss_pred             EEEeecCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHhhhc
Q psy8884         140 LLTEYCPKGSLQDILENEQF-KLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~-~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +||||+++|+|.+++...+. .+++..+..++.||++||+.+
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L  305 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL  305 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999986543 468999999999999999844

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.63  E-value=9.3e-16  Score=117.07  Aligned_cols=111  Identities=17%  Similarity=0.131  Sum_probs=92.9

Q ss_pred             chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          69 NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .+.++.|++|.||.+.  ...+|..||+|.++.......+.+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus        94 ~~~lG~G~~g~Vy~a~--~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCE--ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEECC-----CEEEEE--ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ceEEecCcCEEEEEEE--EcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            4568999999999876  45678999999998766555677899999999999999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.+++......+++.....++.||++||+..+
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  204 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMH  204 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999876667899999999999999998543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.63  E-value=4.4e-16  Score=118.94  Aligned_cols=118  Identities=19%  Similarity=0.217  Sum_probs=99.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.+.+.+.++.|++|.||.+.  ...++..||+|.++.... .....+.+|+.+++.++||||+++++.+...+..++
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGR--LRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEE--EecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            34556777889999999999876  334688999999986432 234568899999999999999999999999899999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||||+++|+|.+++...+..+++..+..++.||++||+.++
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH  230 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE  230 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876667899999999999999998543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.63  E-value=1.5e-15  Score=112.49  Aligned_cols=115  Identities=12%  Similarity=0.152  Sum_probs=100.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      ...|...+.++.|++|.||.+.  ...+|+.||+|.+........+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEE--BTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEE--ECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence            4456777889999999999876  55678999999998765555667889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.+.  .+++.....++.|++.||+..+
T Consensus        97 e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH  133 (297)
T 3fxz_A           97 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH  133 (297)
T ss_dssp             ECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999764  4789999999999999998543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.63  E-value=3.8e-16  Score=122.04  Aligned_cols=165  Identities=24%  Similarity=0.249  Sum_probs=115.8

Q ss_pred             cCcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhh-hhhhcc--cCccccccchhhhhhcccceee
Q psy8884           6 VGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD-ILENEQ--FKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~-~l~~~~--~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      ++..+..+..|.++.++...+.....|.|..      +...|+...+.. .+....  ...+.+.+.+.++.|++|.||.
T Consensus       129 g~~~~~~~~~F~Sl~~Li~~y~~~~~~l~~~------l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~  202 (452)
T 1fmk_A          129 GGFYITSRTQFNSLQQLVAYYSKHADGLCHR------LTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM  202 (452)
T ss_dssp             SCEESSTTSEESSHHHHHHHHTTCCTTSSSC------CCEECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEE
T ss_pred             CCEEEecCcccCCHHHHHHHhhhccccchhh------ccccccccccccCCCCccccccChhHceeeeeecCCCCeEEEE
Confidence            3344444456666666654444444444432      333344332211 111222  2345577778899999999998


Q ss_pred             ecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhc-CCCC
Q psy8884          83 KTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-QFKL  161 (184)
Q Consensus        83 ~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~-~~~l  161 (184)
                      +.+   ..+..||+|.++..... .+.+.+|+.+++.++||||+++++.+.. +..++||||+++|+|.+++... +..+
T Consensus       203 ~~~---~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~  277 (452)
T 1fmk_A          203 GTW---NGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL  277 (452)
T ss_dssp             EEE---TTTEEEEEEECCTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTC
T ss_pred             EEE---CCCceEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCC
Confidence            752   23467999999875432 4678999999999999999999999876 7789999999999999999753 3458


Q ss_pred             CHHHHHHHHHHHHHHhhhcc
Q psy8884         162 EPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       162 ~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++..+..++.||+.||+.++
T Consensus       278 ~~~~~~~i~~qi~~~l~~LH  297 (452)
T 1fmk_A          278 RLPQLVDMAAQIASGMAYVE  297 (452)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999998443

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.62  E-value=1.4e-15  Score=116.11  Aligned_cols=121  Identities=17%  Similarity=0.163  Sum_probs=100.5

Q ss_pred             cCccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .....+.+.+.++.|++|.||.+.... ...+..||+|.++.... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            345667788899999999999875211 12466899999986532 3356789999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||||+++|+|.+++...+..+++.++..++.||++||+.++
T Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  164 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS  164 (373)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876667899999999999999998544

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.62  E-value=1.9e-15  Score=112.97  Aligned_cols=118  Identities=15%  Similarity=0.119  Sum_probs=100.9

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..++.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   ...+.+.+|..++..+.||||+++++++.+.+.
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~   80 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIR--SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ   80 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCE
Confidence            355677888899999999999876  456789999999986533   234567889999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|++|||+++|+|.+++.... .+++.....++.||+.||+.++
T Consensus        81 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  123 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH  123 (318)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998754 5889999999999999998554

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.62  E-value=1.5e-15  Score=116.49  Aligned_cols=117  Identities=15%  Similarity=0.028  Sum_probs=101.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+|+.+|+|.+..........+.+|+.++..++||||+++++.+.+.+..+++|
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCV--EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEE--ECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            3457777889999999999876  45578899999998765444567889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++......+++.....++.||+.||+.++
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  166 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH  166 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876557899999999999999998543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.61  E-value=2.1e-15  Score=113.62  Aligned_cols=117  Identities=18%  Similarity=0.075  Sum_probs=100.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.++.|++|.||++.  ...+|+.||+|.++....   .....+.+|..++..++||||+++++.+.+.+..
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   80 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEE
Confidence            45667788889999999999876  556789999999986532   2345688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+||||+++|+|..++...+ .+++.....++.||+.||+.++
T Consensus        81 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  122 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH  122 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998654 5889999999999999998543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.61  E-value=2.1e-15  Score=113.01  Aligned_cols=120  Identities=17%  Similarity=0.168  Sum_probs=100.7

Q ss_pred             ccCccccccchhhhhhcccceeeecceeee---cCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLK---EGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +.....|.+.+.++.|++|.||.+.  ...   .+..||+|.++.... .....+.+|+.+++.++||||+++++++.+.
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~--~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  122 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGR--LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG  122 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEE--ECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEE--EecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3455677888899999999999876  222   344699999986532 3356789999999999999999999999998


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..++||||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH  168 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS  168 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999876667899999999999999998543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=2.2e-15  Score=112.76  Aligned_cols=115  Identities=9%  Similarity=-0.067  Sum_probs=98.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.|++|.+|.+.  ...++..+|+|.++.... ....+.+|+.+++.++||||+++++.+.+.+..+++||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCV--ETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hceEeeeEEecCCCeEEEEEE--ECCCCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            456677889999999999876  455788999999975532 24568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++......+++.....++.||++||+..+
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  119 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH  119 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876657899999999999999998543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.61  E-value=2.1e-15  Score=114.63  Aligned_cols=115  Identities=14%  Similarity=0.048  Sum_probs=98.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|..||+|.++.....      ..+.+.+|+.++..+.||||+++++.+.+.+.
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~--~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCR--EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hceEEeeEEeeCcCEEEEEEE--ECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            346777889999999999876  5567899999999865432      24578899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++||||+++|+|.+++.... .+++.....++.||+.||...+
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH  132 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH  132 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997644 6899999999999999998543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.61  E-value=4.9e-16  Score=121.47  Aligned_cols=115  Identities=23%  Similarity=0.210  Sum_probs=95.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+.+.+.++.|++|.||.+.+   ..+..||+|.++.... ..+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEE---TTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             chHHeEEEEEcccCCceEEEEEEE---CCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            445677778899999999998752   2467899999986543 3567999999999999999999999886 5678999


Q ss_pred             EeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++... ...+++..+..++.||+.||+.++
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH  301 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE  301 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999854 235788899999999999998543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.61  E-value=2.2e-15  Score=109.51  Aligned_cols=119  Identities=20%  Similarity=0.268  Sum_probs=100.8

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC--
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP--  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--  135 (184)
                      ....+.+.+.+.++.|++|.+|.+.    ..+..||+|.++....  ...+.+.+|+.+++.++||||+++++++.++  
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGR----WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEE----ETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEE----ECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC
Confidence            3456677888899999999999865    5689999999986542  3355789999999999999999999999876  


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~-~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+++|||+++|+|.+++..... .+++..+..++.|+++||+..++
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  129 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT  129 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            788999999999999999987543 58999999999999999997664

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.61  E-value=4.5e-15  Score=108.11  Aligned_cols=116  Identities=18%  Similarity=0.189  Sum_probs=99.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+.+.+.++.|++|.+|.+.   ...+..||+|.++..... .+.+.+|+.++..++||||+++++.+.+.+..+++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGY---WLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   83 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEE---ETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             ChhhceeeheecCCCccEEEEEE---ecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence            34567777889999999999875   225778999999865432 45688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH  123 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE  123 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876667899999999999999998543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.61  E-value=1.7e-15  Score=111.72  Aligned_cols=121  Identities=22%  Similarity=0.245  Sum_probs=101.1

Q ss_pred             cCccccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec--CC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD--PP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~  136 (184)
                      +..+.+.+.+.++.|++|.+|.+.+.  ...+++.||+|.++.......+.+.+|+.++..++||||+++++.+..  ..
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            44566778888999999999987522  234688999999987665556778999999999999999999998854  35


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  131 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG  131 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh
Confidence            689999999999999999876666899999999999999998554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.61  E-value=2e-15  Score=116.58  Aligned_cols=121  Identities=12%  Similarity=0.020  Sum_probs=102.8

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .....+.|...+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|..++..++|+||+++++++.+.
T Consensus        56 ~~~~~~~f~~~~~lG~G~fG~V~~~~--~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           56 VRLQRDDFEILKVIGRGAFSEVAVVK--MKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE  133 (412)
T ss_dssp             HSCCGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             ccCChhhEEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            34556778888899999999999876  445789999999986432   2234578999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|.+++.+.+..+++.....++.||+.||+.++
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH  179 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH  179 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999876557899999999999999998544

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.60  E-value=3.9e-15  Score=113.12  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=100.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.|.+.+.++.|++|.||.+.  ...+++.||+|.+..... ....+.+|+..++.++||||+++++++.+++..++|
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMR--DKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEE--ETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEE--ECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            34567788889999999999876  556789999999986543 245688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++...+ .+++.....++.|++.||+..+
T Consensus        95 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH  133 (361)
T 3uc3_A           95 MEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH  133 (361)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654 5899999999999999998544

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.60  E-value=4.8e-16  Score=123.82  Aligned_cols=165  Identities=24%  Similarity=0.249  Sum_probs=116.0

Q ss_pred             cCcccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhh-hhhhcc--cCccccccchhhhhhcccceee
Q psy8884           6 VGRQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQD-ILENEQ--FKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~-~l~~~~--~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      ++..+..+..|.++.+|...+.....|.|..      +...|+...+.. .+....  ...+.+.+.+.++.|++|.||.
T Consensus       212 g~~~i~~~~~F~SL~eLv~~y~~~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~  285 (535)
T 2h8h_A          212 GGFYITSRTQFNSLQQLVAYYSKHADGLCHR------LTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM  285 (535)
T ss_dssp             SCEEEETTEEESSHHHHHHHHHHCCTTSSSC------CCEECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSEEEEE
T ss_pred             CcEEeeccccccChHHhheeeccccCccccc------cccccccccccccccCccceecchhhhhhheecccCCCeEEEE
Confidence            3344444556667777655554444455432      233343322211 111122  2345577778899999999998


Q ss_pred             ecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhc-CCCC
Q psy8884          83 KTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE-QFKL  161 (184)
Q Consensus        83 ~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~-~~~l  161 (184)
                      +.+   ..+..||+|.++..... .+.+.+|+.+++.++|+||+++++.+.. +..++||||+++|+|.+++... ...+
T Consensus       286 ~~~---~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l  360 (535)
T 2h8h_A          286 GTW---NGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL  360 (535)
T ss_dssp             EEE---TTTEEEEEEEECTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTC
T ss_pred             EEE---CCCceEEEEEeCCCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCC
Confidence            752   23467999999875432 4678999999999999999999999876 6789999999999999999753 3458


Q ss_pred             CHHHHHHHHHHHHHHhhhcc
Q psy8884         162 EPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       162 ~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++..+..++.||++||+.++
T Consensus       361 ~~~~~~~i~~qi~~~L~~LH  380 (535)
T 2h8h_A          361 RLPQLVDMAAQIASGMAYVE  380 (535)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999998543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.60  E-value=3.3e-15  Score=114.38  Aligned_cols=120  Identities=13%  Similarity=0.090  Sum_probs=103.0

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .....+.|.+...++.|++|.||.+.  ...+++.||+|.++....   .....+.+|+.++..++||||+++++++.+.
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~--~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   87 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQ--KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE   87 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            44567788888999999999999876  556788999999976542   2345688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+.+|+|..++.... .+++.....++.||+.||+.++
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH  132 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ  132 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 6899999999999999998544

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.59  E-value=4.5e-15  Score=113.03  Aligned_cols=122  Identities=16%  Similarity=0.080  Sum_probs=99.4

Q ss_pred             ccCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +...+.+.+.+.++.|++|.||.+.+.   ....+..||+|.++.... .....+.+|+.++..++||||+++++.+...
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  146 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  146 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            344566778888999999999987643   234577999999975432 3345688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQ------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..++||||+++|+|.+++....      ..+++..+..++.||++||+.++
T Consensus       147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  198 (367)
T 3l9p_A          147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE  198 (367)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998643      35889999999999999998544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.59  E-value=6.2e-15  Score=109.73  Aligned_cols=117  Identities=22%  Similarity=0.238  Sum_probs=98.8

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ....+.+.+.++.|++|.||.+.    ..|..||+|.+.....  .....+.+|+.+++.++||||+++++.+...+..+
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAE----WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS  110 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE----ETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred             ChhHceeeeEeecCCCeEEEEEE----ECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence            34567777889999999998864    5789999999976543  33457889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++....  ..+++..+..++.|+++||+.+++
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  155 (309)
T 3p86_A          111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN  155 (309)
T ss_dssp             EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999998643  238899999999999999986654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.59  E-value=3.6e-15  Score=116.00  Aligned_cols=119  Identities=14%  Similarity=0.023  Sum_probs=101.0

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|.+.+.++.|++|.||++.  ...+++.||+|.++....   .....+.+|..++..++||||+++++++.+.+.
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~--~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~  148 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVK--LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN  148 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEE--EcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence            445678888899999999999876  445678999999986433   123348899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|+||||+++|+|.+++.+....+++.....++.||+.||+.++
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH  192 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH  192 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999875557899999999999999998543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.59  E-value=4.9e-15  Score=109.48  Aligned_cols=115  Identities=17%  Similarity=0.069  Sum_probs=98.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|.+.+.++.|++|.+|.+.  ....+..||+|.+.....   .....+.+|+..+..++||||+++++.+...+..++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--ETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEE--ECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            446777889999999999876  556789999999865322   335678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++...+ .+++.....++.|+++||+..+
T Consensus        89 v~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  128 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH  128 (294)
T ss_dssp             EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998654 6899999999999999998543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.59  E-value=4.7e-15  Score=111.12  Aligned_cols=115  Identities=15%  Similarity=0.084  Sum_probs=97.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      +.|...+.++.|++|.||.+.  ...+|..||+|.++.....      ..+.+.+|+.++..++||||+++++.+...+.
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCR--EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEE--ETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cceEeceEEeeCCCeEEEEEE--ECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            346677889999999999876  4557899999999765331      24568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++.... .+++.....++.||+.||+..+
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH  131 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH  131 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997644 6899999999999999998544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.59  E-value=5.5e-15  Score=111.90  Aligned_cols=118  Identities=16%  Similarity=0.115  Sum_probs=101.2

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..++.|...+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.++..+.||||+++++.+.+.+.
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  115 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEE--ECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            356778888899999999999876  455789999999986543   234568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|+||||+++|+|.+++.+.+ .+++.....++.||+.||+.++
T Consensus       116 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  158 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH  158 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998754 5889999999999999998543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.59  E-value=4.7e-15  Score=112.63  Aligned_cols=112  Identities=17%  Similarity=0.077  Sum_probs=93.7

Q ss_pred             cccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.||++..+ ...+++.||+|.+.....  ...+.+|+.++..+ .||||+++++++.+.+.+|+|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            45788889999999999987521 123567999999876532  34578899999988 699999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++.    .+++.+...++.|++.||+..|
T Consensus        99 mE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH  134 (361)
T 4f9c_A           99 MPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH  134 (361)
T ss_dssp             EECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999984    3789999999999999998443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.59  E-value=2e-15  Score=114.22  Aligned_cols=116  Identities=12%  Similarity=0.015  Sum_probs=97.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-----hhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-----LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-----~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.||+|.++.....     ..+.+.+|+.++..++||||+++++.+.+.+..
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCI--NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cceEEeeEEeeCCCEEEEEEE--ECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            456777889999999999876  5567899999999754321     246688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+||||+++|+|.+.+...   ...+++.....++.||++||+..+
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH  147 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH  147 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999888643   235789999999999999998543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.59  E-value=7.1e-15  Score=106.93  Aligned_cols=116  Identities=22%  Similarity=0.211  Sum_probs=98.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+.+.+.++.|++|.+|.+.   ...+..||+|.++..... ...+.+|+.++..++||||+++++.+...+..+++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGK---WKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE---ETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEE---ecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence            44567777889999999999864   234568999999865433 45688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++...+..+++..+..++.|+++||+..+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  121 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE  121 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876666899999999999999998543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.58  E-value=5e-15  Score=112.57  Aligned_cols=115  Identities=10%  Similarity=0.004  Sum_probs=98.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|..||+|.++....  ...+.+.+|+.+++.++||||+++++.+.+.+..|+|
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEE--ECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            346777889999999999876  455789999999986543  2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++.... .+++.....++.||++||+..+
T Consensus       107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH  145 (362)
T 2bdw_A          107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH  145 (362)
T ss_dssp             ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997654 6889999999999999998443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.58  E-value=7.6e-15  Score=112.41  Aligned_cols=118  Identities=11%  Similarity=0.065  Sum_probs=99.7

Q ss_pred             Cccccccchhhhhh--cccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDI--VKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.|.+.+.++.|  ++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++++.+.+.
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLAR--YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEE--ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEE--EcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            34567777889989  888899876  455789999999986543  334567889999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++||||+++|+|.+++... ...+++..+..++.||+.||+.++
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH  145 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH  145 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999864 246899999999999999998443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.58  E-value=5.1e-15  Score=110.74  Aligned_cols=112  Identities=16%  Similarity=0.131  Sum_probs=96.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeec
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      +.....++.|++|.||.+.  ...+|+.||+|.++.......+.+.+|+.+++.++||||+++++.+...+..+++|||+
T Consensus        47 ~~~~~~lg~G~~g~V~~a~--~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  124 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAR--EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL  124 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhccEEeccCCCeEEEEEE--ECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence            4445678889999999876  44578999999998765555667889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         146 PKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|+|.+++...  .+++..+..++.|+++||+..+
T Consensus       125 ~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH  158 (321)
T 2c30_A          125 QGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH  158 (321)
T ss_dssp             CSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999998753  4889999999999999998543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.58  E-value=5.5e-15  Score=108.07  Aligned_cols=118  Identities=19%  Similarity=0.211  Sum_probs=101.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++.+.+.+..
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAE--SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred             ccccceeeeeecCCCceEEEEEE--EccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence            45567788889999999999876  456789999999976533   2246788999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++++||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  129 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH  129 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876567899999999999999998543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.58  E-value=3.9e-15  Score=116.90  Aligned_cols=119  Identities=19%  Similarity=0.226  Sum_probs=102.2

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....+.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++.+...+
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~   89 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGK--HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS   89 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEE--ETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            3456778888999999999999876  556789999999986543   23456889999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..++||||+++|+|.+++...+ .+++.....++.||+.||+..+
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH  133 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH  133 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997644 6899999999999999998544

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.58  E-value=6.4e-15  Score=107.69  Aligned_cols=114  Identities=12%  Similarity=0.086  Sum_probs=98.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|.+.+.++.|++|.+|.+.  ...++..+|+|.+........+.+.+|+.+++.++||||+++++.+.+.+..+++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~--~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hEEeeeEEeecCCEEEEEEE--eCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            46677888999999999876  4456779999999876555567789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|+|.+++.... .+++.....++.|++.||+..+
T Consensus        88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH  123 (277)
T 3f3z_A           88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH  123 (277)
T ss_dssp             CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999987654 5889999999999999998443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.58  E-value=6.8e-15  Score=114.69  Aligned_cols=114  Identities=11%  Similarity=0.010  Sum_probs=96.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.+|+|.++....  ...+.+.+|+.+++.++||||+++++.+.+.+..|++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~--~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCV--KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEE--ETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEE--ECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            346677889999999999876  556789999999986543  2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |||+++|+|.+.+.... .+++.....++.||++||+..
T Consensus        89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~l  126 (444)
T 3soa_A           89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHC  126 (444)
T ss_dssp             ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998754 689999999999999999843

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.58  E-value=8.2e-15  Score=109.33  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=97.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC--cEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~--~~~  139 (184)
                      ...|.+.+.++.|++|.||.+.  ...+|+.||+|.++.... ...+.+.+|+.+++.++||||+++++.+...+  ..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGR--HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEE--ECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            3457777889999999999876  445688999999986543 33566789999999999999999999887654  789


Q ss_pred             EEEeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||+++|+|.+++....  ..+++..+..++.|+++||+.++
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  129 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998643  23899999999999999998543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.58  E-value=6.5e-15  Score=111.63  Aligned_cols=119  Identities=14%  Similarity=0.121  Sum_probs=98.8

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...++.|.+...++.|++|.||++.  ...+|+.||+|.++....   .....+..|..++..+ .||||+++++++.+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLAR--VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP   96 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEE--EcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence            4566778888999999999999876  455788999999986532   2345577899999987 799999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|..++.+.+ .+++.....++.||+.||+.++
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  141 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH  141 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998754 5899999999999999998543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.58  E-value=9.7e-15  Score=110.34  Aligned_cols=118  Identities=15%  Similarity=0.085  Sum_probs=99.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ..++.|.+.+.++.|++|.||.+.  ...+++.||+|.++....   .....+.+|..++..+ +||||+++++++.+.+
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVR--LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES   83 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CchhheEEEEEEEecCCeEEEEEE--ECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC
Confidence            356678888899999999999876  445688999999986543   2345577899999887 8999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|.+++.+.+ .+++.....++.||+.||+.++
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH  127 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH  127 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998654 5899999999999999998543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.58  E-value=9.5e-15  Score=108.68  Aligned_cols=113  Identities=12%  Similarity=0.088  Sum_probs=95.9

Q ss_pred             ccc-chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEe
Q psy8884          66 MFK-NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        66 ~~~-~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      |.+ .+.++.|++|.+|.+.  ...+++.||+|.++.........+.+|+.++.++ .||||+++++.+...+..++|||
T Consensus        14 y~i~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCI--NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEE--CSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCceecCCceEEEEEEE--EcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            444 3678899999999876  5567899999999876544466788999999885 79999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++.... .+++.....++.||++||+..+
T Consensus        92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH  128 (316)
T 2ac3_A           92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH  128 (316)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999998654 5889999999999999998543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.58  E-value=7e-15  Score=108.67  Aligned_cols=117  Identities=16%  Similarity=0.134  Sum_probs=97.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...+|..||+|.+..........+.+|+.++..++||||+++++.+...+..+++|
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEE--ETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             ccceeecceeccCCCeEEEEEE--EcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            3456777889999999999876  44568899999998765555677899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  134 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH  134 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999875557899999999999999998543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.57  E-value=1.3e-14  Score=106.41  Aligned_cols=117  Identities=16%  Similarity=0.170  Sum_probs=96.5

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ...+.+.+.+.++.|++|.+|.+.   ...+..||+|.++..... .+.+.+|+.++..++|+||+++++.+...+..++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGK---WRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEE---ETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEE---EcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence            345567777889999999998874   234668999999865433 4568899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  137 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE  137 (283)
T ss_dssp             EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999875557899999999999999998543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.57  E-value=2.7e-15  Score=112.36  Aligned_cols=116  Identities=21%  Similarity=0.162  Sum_probs=96.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+++.||+|.++.... ...+.+.+|+.+++.++||||+++++.+.+++..+++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEE--ECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            3557777889999999999876  556789999999976543 2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++.... .+++.....++.|++.||+..+
T Consensus        84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH  122 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH  122 (323)
T ss_dssp             EECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997643 5899999999999999998543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.57  E-value=4.5e-15  Score=114.56  Aligned_cols=118  Identities=14%  Similarity=0.051  Sum_probs=99.9

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....+.|.+.+.++.|++|.||++.  ...+++.||+|.++....   .....+.+|..++..++||||+++++++.+.+
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~--~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEE--ECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            3456678888899999999999876  445788999999976432   22345789999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|.+++.+.  .+++.....++.||+.||+.++
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH  185 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH  185 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999764  4789999999999999998543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.57  E-value=1.7e-14  Score=105.87  Aligned_cols=117  Identities=19%  Similarity=0.239  Sum_probs=100.0

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ...+.+.+.+.++.|++|.+|.+.  ....+..||+|.++.... ..+.+.+|+.+++.++||||+++++.+.+.+..++
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   86 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGV--WKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   86 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEE--EGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeE--ecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence            345667788889999999999976  445688999999986543 35678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         141 LTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +|||+++|+|.+++... ...+++..+..++.|++.||+..
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  127 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL  127 (288)
T ss_dssp             EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH
Confidence            99999999999999864 34589999999999999999844

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.57  E-value=1.4e-14  Score=107.15  Aligned_cols=122  Identities=20%  Similarity=0.203  Sum_probs=97.9

Q ss_pred             ccCccccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC-
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-  135 (184)
                      .+....+...+.++.|++|.+|.+.+.  +...++.||+|.++.... .....+.+|+.++..++|+||+++++.+... 
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG   96 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence            344555777788999999999987521  245788999999986543 3346788999999999999999999998876 


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       +..+++|||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  143 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG  143 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh
Confidence             6789999999999999999766667899999999999999998544

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.57  E-value=1.3e-14  Score=109.01  Aligned_cols=122  Identities=18%  Similarity=0.183  Sum_probs=100.5

Q ss_pred             ccCccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ....+.|.+.+.++.|++|.+|.+...+.   ..+..||+|.++.... .....+.+|+.+++.++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            44566778888899999999998762211   2347899999986533 3356789999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQ-----------------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++....                       ..+++.++..++.||++||+..+
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH  191 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS  191 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999997632                       46889999999999999998544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.57  E-value=1.3e-14  Score=110.60  Aligned_cols=121  Identities=19%  Similarity=0.207  Sum_probs=98.7

Q ss_pred             cCccccccchhhhhhcccceeeecceee-----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeee
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELL-----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACL  133 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~  133 (184)
                      +..+.|.+.+.++.|++|.||.+...+.     ..+..||+|.++.... .....+.+|+.++..+ +||||+++++++.
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  157 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  157 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence            3456677888899999999998762211     2345799999986533 3356789999999999 8999999999999


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+..|+||||+++|+|.+++....               ..+++..+..++.||++||+.++
T Consensus       158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  220 (370)
T 2psq_A          158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA  220 (370)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998643               24788999999999999998543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.57  E-value=1.1e-14  Score=108.42  Aligned_cols=117  Identities=14%  Similarity=0.035  Sum_probs=96.8

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeee----cCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL----DPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~----~~~~~  138 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...+|+.||+|.+........+.+.+|+.+++.++||||+++++++.    .....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVE--GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEE--ETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEE--ecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            3457778889999999999876  55678999999997665555677889999999999999999999886    34578


Q ss_pred             EEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++++||+++|+|.+++..   ....+++..+..++.|+++||+.++
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  151 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH  151 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999975   3456899999999999999998543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.56  E-value=1.9e-14  Score=105.72  Aligned_cols=118  Identities=20%  Similarity=0.174  Sum_probs=98.3

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-------hhHHHHHHHHHHHcCCCcchhhhheeee
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-------LTRPLLLELKRLKDLHHDHLVKFIGACL  133 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~l~~~~~  133 (184)
                      ...+.+.+.+.++.|++|.+|.+.  ...+++.||+|.+......       ..+.+.+|+.++..++||||+++++.+.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGR--LVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEE--ETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             hhhccceehhccccCCceeEEEEE--EcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            345667788889999999999876  4457889999999754321       1267889999999999999999999987


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..  +++|||+++|+|.+.+......+++.....++.|++.||+..++
T Consensus        94 ~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~  140 (287)
T 4f0f_A           94 NPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN  140 (287)
T ss_dssp             TTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh
Confidence            655  79999999999999998766678999999999999999986554

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.56  E-value=1.3e-14  Score=108.59  Aligned_cols=120  Identities=23%  Similarity=0.190  Sum_probs=100.1

Q ss_pred             Cccccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeee--cCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL--DPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~--~~~~  137 (184)
                      ..+.|.+.+.++.|++|.+|.+.+.  +...+..||+|.++.......+.+.+|+.+++.++|+||+++++.+.  ..+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence            3456777788999999999987522  23467899999998776555677899999999999999999999876  4567


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++......+++..+..++.|++.||+.++
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  144 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG  144 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999875556899999999999999998544

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.56  E-value=1.1e-14  Score=106.49  Aligned_cols=121  Identities=20%  Similarity=0.210  Sum_probs=102.9

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ..+.++.|.+.+.++.|++|.+|.+.  ....+..||+|.+.....   .....+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   81 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAR--EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA   81 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEE--EccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC
Confidence            45677888888999999999999876  455678999999976433   2245688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+++|||+++|+|.+++.... .+++.....++.|++.||+..++
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~  127 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS  127 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999997654 58899999999999999985543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.56  E-value=8.8e-15  Score=110.59  Aligned_cols=119  Identities=17%  Similarity=0.157  Sum_probs=98.6

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ....+.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   .....+..|..++..+ .||||+++++++.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAE--FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK   90 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEE--ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC
Confidence            3456778888999999999999986  445788999999986532   2345577888888876 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|.+++...+ .+++.....++.||+.||+.++
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  135 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH  135 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 5889999999999999998544

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.56  E-value=1e-14  Score=108.01  Aligned_cols=114  Identities=16%  Similarity=0.120  Sum_probs=94.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.........+.+|+.++..++||||+++++.+...+..+++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVK--QRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceeeeeccCCCCceEEEEE--ECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            346677889999999999876  455789999999987654445668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      |+++|+|.+++...+ .+++.....++.|++.||+..
T Consensus        87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l  122 (304)
T 2jam_A           87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYL  122 (304)
T ss_dssp             CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999997654 578999999999999999844

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.56  E-value=1.7e-14  Score=104.70  Aligned_cols=116  Identities=19%  Similarity=0.203  Sum_probs=98.7

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+.+.+.++.|++|.+|.+.   ...+..||+|.++..... .+.+.+|+.++..++||||+++++.+...+..+++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGY---WLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   81 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE---ETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             chhheeeeeEecCCCceeEEEEE---ecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence            34566777889999999999875   225678999999865432 46788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  121 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE  121 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876667899999999999999998543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.56  E-value=1.5e-14  Score=108.22  Aligned_cols=122  Identities=23%  Similarity=0.254  Sum_probs=100.4

Q ss_pred             ccCccccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC--
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP--  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~--  135 (184)
                      .+....+.+.+.++.|++|.+|.+.+.  ...+|+.||+|.++.......+.+.+|+.+++.++|+||+++++.+...  
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  116 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR  116 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence            345566778888999999999886521  2346889999999876555567789999999999999999999988664  


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus       117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  162 (326)
T 2w1i_A          117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG  162 (326)
T ss_dssp             -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3789999999999999999877667899999999999999998543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.56  E-value=1.5e-14  Score=108.13  Aligned_cols=116  Identities=16%  Similarity=0.097  Sum_probs=92.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP------  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~------  136 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.++.... ...+.+.+|+.+++.++||||+++++.+...+      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAK--NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEE--ETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEE--EcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            346667889999999999876  455789999999985443 33567899999999999999999999875533      


Q ss_pred             ---------------------------------------------------cEEEEEeecCCCCHHHHHhhcC--CCCCH
Q psy8884         137 ---------------------------------------------------HCCLLTEYCPKGSLQDILENEQ--FKLEP  163 (184)
Q Consensus       137 ---------------------------------------------------~~~lv~e~~~~gsl~~~l~~~~--~~l~~  163 (184)
                                                                         ..+++|||+++|+|.+++....  ...++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                               2799999999999999998643  23466


Q ss_pred             HHHHHHHHHHHHHhhhcc
Q psy8884         164 MFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       164 ~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+..++.||+.||+..+
T Consensus       164 ~~~~~i~~qi~~aL~~LH  181 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLH  181 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            778899999999998543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.56  E-value=1.4e-14  Score=108.36  Aligned_cols=114  Identities=18%  Similarity=0.105  Sum_probs=95.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC----c
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----H  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----~  137 (184)
                      ..+.|.+.+.++.|++|.||.+.    ..++.||+|.++..... ......|+.++..++||||+++++.+....    .
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQ----LLNEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEE----ETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             chhhchhhheecccCceEEEEEE----ECCCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence            45667888899999999999864    56899999999765432 334567888999999999999999988744    3


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++||||+++|+|.+++....  +++..+..++.|+++||+..++
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~  139 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHE  139 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHh
Confidence            699999999999999997643  8899999999999999987664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.55  E-value=1.2e-14  Score=111.75  Aligned_cols=118  Identities=14%  Similarity=0.083  Sum_probs=99.1

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ..++.|.+...++.|++|.||++.  ...+++.||+|+++....   .....+..|..++..+ +||||+++++++.+.+
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~--~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVR--LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES  126 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC
Confidence            456778888999999999999876  445688999999986543   2244577888888876 8999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|..++.+.+ .+++.....++.||+.||+.++
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH  170 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH  170 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998654 6899999999999999998543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.55  E-value=1e-14  Score=107.41  Aligned_cols=113  Identities=12%  Similarity=0.089  Sum_probs=94.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|.+.+.++.|++|.+|.+.  ....|+.||+|.++....   .....+.+|+..+..+.|+||+++++++...+..|+
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEE--ETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEE--ecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            457777889999999999876  445689999999986533   234678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||||+++|+|.++++..   ........++.|+++||+..+
T Consensus       109 v~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH  146 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH  146 (286)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH
Confidence            99999999999999643   355667889999999998544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.55  E-value=1.7e-14  Score=105.83  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=101.4

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ..+..+.|.+.+.++.|++|.+|.+.  ...++..||+|.+.....   .....+.+|+.++..++|+|++++++.+.+.
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   86 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAR--EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR   86 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             cchhhhhceeeheecCCCCeEEEEEE--EcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC
Confidence            44567788888999999999999876  445678999999976532   2245688999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++.... .+++.....++.|+++||+..+
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  131 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH  131 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 5889999999999999998554

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.55  E-value=7.8e-15  Score=109.53  Aligned_cols=117  Identities=21%  Similarity=0.193  Sum_probs=99.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.|.....++.|++|.+|.+.   ...|..||+|.+........+.+.+|+.+++.++||||+++++.+...+..+++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~---~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  113 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGV---LRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI  113 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEE---CTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred             HHhccCccceeecCCCeeEEEEE---ECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            34567777889999999999875   235889999998876555567789999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQ---FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~---~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++....   ..+++..+..++.|+++||+.++
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  156 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH  156 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999997542   35889999999999999998544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.55  E-value=1.8e-14  Score=105.13  Aligned_cols=118  Identities=20%  Similarity=0.235  Sum_probs=100.0

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++....   .....+.+|+..++.++||||+++++.+...+.
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   85 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGE--HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD   85 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEE--ECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence            355667888889999999999876  445789999999976532   234578899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++++|.+++.... .+++.....++.|+++||+..+
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  128 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH  128 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997654 5789999999999999998543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.55  E-value=2e-14  Score=114.92  Aligned_cols=121  Identities=13%  Similarity=-0.003  Sum_probs=101.9

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .....+.|.....++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.++..++||||+++++++.+.
T Consensus       179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~--~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~  256 (576)
T 2acx_A          179 QPVTKNTFRQYRVLGKGGFGEVCACQ--VRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK  256 (576)
T ss_dssp             SCCCGGGEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cCccccceEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC
Confidence            33566778888899999999999876  445789999999986543   2245578999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|.+++...+ ..+++.....++.||+.||+.++
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH  303 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH  303 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999997643 35899999999999999998543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.55  E-value=1.4e-14  Score=108.22  Aligned_cols=115  Identities=14%  Similarity=0.046  Sum_probs=97.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|..||+|.++.....      ..+.+.+|+.++..+.||||+++++.+...+.
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCR--EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccEEEeeEeeecCCEEEEEEE--ECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            346677889999999999876  4557889999999865331      24568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++.... .+++.....++.|++.||+..+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH  132 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH  132 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997644 6789999999999999998543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.55  E-value=1.8e-14  Score=105.85  Aligned_cols=116  Identities=17%  Similarity=0.148  Sum_probs=98.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ....+..+|+|.+..... ...+.+.+|+.+++.++||||+++++.+.+.+..+++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVE--ERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEE--EccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            446677889999999999876  456788999999986543 23567889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++...   ...+++..+..++.|+++||+.++
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  141 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH  141 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999998642   356899999999999999998543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.54  E-value=1.9e-14  Score=116.30  Aligned_cols=110  Identities=18%  Similarity=0.150  Sum_probs=92.0

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGS  149 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~gs  149 (184)
                      .++.|++|.||.+.+.....+..||+|.++.... ...+.+.+|+.+++.++||||+++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            5788899999987633333456899999986533 345679999999999999999999999876 66999999999999


Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         150 LQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       150 l~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |.+++......+++..+..++.||++||+.++
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH  453 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE  453 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999876667899999999999999998543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.54  E-value=1.7e-14  Score=108.12  Aligned_cols=120  Identities=20%  Similarity=0.071  Sum_probs=94.2

Q ss_pred             cCccccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ...+.|.+.+.++.|++|.||.+... +..+|+.||+|.++....    .....+.+|+.+++.++||||+++++.+...
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   93 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG   93 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence            45567888899999999999986511 124788999999986532    2244577899999999999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|++|||+++|+|.+++...+ .+++.....++.||+.||+..+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH  138 (327)
T 3a62_A           94 GKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH  138 (327)
T ss_dssp             SCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 5788999999999999998443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.54  E-value=2.5e-14  Score=104.77  Aligned_cols=114  Identities=14%  Similarity=0.094  Sum_probs=96.6

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.....      ..+.+.+|+.+++.++||||+++++.+...+..
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCR--QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhHHhhcccCceEEEEEE--EcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            45667788899999999876  4456889999999765321      246788999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++++|.+++.+.. .+++..+..++.|++.||+..+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH  125 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH  125 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997644 6899999999999999998543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=2.8e-14  Score=104.91  Aligned_cols=116  Identities=17%  Similarity=0.150  Sum_probs=94.0

Q ss_pred             ccccch-hhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          65 PMFKNS-LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        65 ~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+ .++.|++|.+|.+.......+..||+|.++.... ...+.+.+|+.++..++||||+++++.+. .+..+++|
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~   88 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVM   88 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEE
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEE
Confidence            344444 7888999999987643344678899999987533 34567889999999999999999999984 56789999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  127 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE  127 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876667899999999999999998543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.54  E-value=1.9e-14  Score=113.51  Aligned_cols=115  Identities=18%  Similarity=0.106  Sum_probs=94.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.||.+.  ...++..+|+|.++....  .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCR--DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEE--ETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEE--ECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            346777889999999999876  555788999999986542  2356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+.+.... .+++.....++.||++||+..+
T Consensus       115 ~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH  153 (494)
T 3lij_A          115 MECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH  153 (494)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887654 5889999999999999998544

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.54  E-value=2.4e-14  Score=113.22  Aligned_cols=115  Identities=22%  Similarity=0.226  Sum_probs=95.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-------------hhhHHHHHHHHHHHcCCCcchhhhhe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-------------DLTRPLLLELKRLKDLHHDHLVKFIG  130 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-------------~~~~~~~~e~~~l~~l~h~ni~~l~~  130 (184)
                      +.|...+.++.|++|.||.+.  ...++..||+|.++....             ...+.+.+|+.+++.++||||+++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCK--EKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEE--ETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cceEEEeEecccCCeEEEEEE--ECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            457777889999999999876  455788999999976432             12456889999999999999999999


Q ss_pred             eeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         131 ACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       131 ~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+..+
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH  163 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH  163 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999997654 5899999999999999998543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.54  E-value=3.6e-14  Score=106.17  Aligned_cols=121  Identities=16%  Similarity=0.078  Sum_probs=96.0

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ...+.|.+.+.++.|++|.+|.+...   ....+..||+|.+..... .....+.+|+.+++.+.||||+++++.+...+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            34566778888999999999987633   234677999999975432 33556889999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++|+|.+++....      ..+++..+..++.|+++||+.++
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH  157 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE  157 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998643      34788999999999999998543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.54  E-value=2.1e-14  Score=105.16  Aligned_cols=116  Identities=19%  Similarity=0.145  Sum_probs=97.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|...+.++.|++|.+|.+.  ...+++.||+|.++....  .....+.+|+..+..+ .||||+++++.+...+..++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCV--KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEE--EcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            346667889999999999876  445789999999986432  3355678899999998 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++...   ...+++..+..++.||++||+..+
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH  132 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH  132 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999754   246899999999999999998543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=3.4e-14  Score=106.72  Aligned_cols=121  Identities=16%  Similarity=0.135  Sum_probs=98.9

Q ss_pred             cCccccccchhhhhhcccceeeecceee--ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELL--KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      .....+...+.++.|++|.||.+.....  ..+..||+|.++.... .....+.+|+.++..++||||+++++.+...+.
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  120 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP  120 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence            3455677778899999999998752211  1234699999986532 334568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++......+++..+..++.|+++||+.++
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  164 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA  164 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876667899999999999999998543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.54  E-value=1.4e-14  Score=109.06  Aligned_cols=115  Identities=19%  Similarity=0.246  Sum_probs=98.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++.+.+++..
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   84 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLAT--HYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI   84 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            45667888899999999999876  556789999999976432   2245688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +++|||+ +|++.+++.... .+++.....++.||+.||+..
T Consensus        85 ~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L  124 (336)
T 3h4j_B           85 VMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYC  124 (336)
T ss_dssp             EEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999 689999887654 589999999999999999843

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.54  E-value=1.7e-14  Score=110.87  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=97.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC--cEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~--~~~  139 (184)
                      ...|.+.+.++.|++|.||.+.  ...+|+.||+|.++.... ...+.+.+|+.+++.++||||+++++.+...+  ..+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGR--HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEE--ECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            3457778889999999999876  445689999999986543 33566789999999999999999999987654  789


Q ss_pred             EEEeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||+++|+|.+++....  ..+++..+..++.||+.||+.++
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  129 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997643  23899999999999999998543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.54  E-value=3.6e-14  Score=106.27  Aligned_cols=106  Identities=17%  Similarity=0.081  Sum_probs=91.9

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      +.++.|++|.||.+.  ...+|+.||+|.++...   ...+.+|+..+..+. ||||+++++++.+.+..++||||+++|
T Consensus        17 ~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCV--HKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEE--ETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEE--ECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            568889999999876  45578999999997643   345778999999997 999999999999999999999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.+++.... .+++.....++.|++.||+..+
T Consensus        92 ~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH  123 (325)
T 3kn6_A           92 ELFERIKKKK-HFSETEASYIMRKLVSAVSHMH  123 (325)
T ss_dssp             BHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999998754 6899999999999999998544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.54  E-value=1.4e-14  Score=109.56  Aligned_cols=113  Identities=16%  Similarity=0.052  Sum_probs=90.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.|++|.||.+.  ...+++.||+|.++...  ..+.+.+|+.++..+.||||+++++.+..++..+++||
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCK--QKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CcEEEeeEEeeCCCEEEEEEE--ECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            446777889999999999876  44467899999998653  24557789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++...+ .+++.....++.|+++||+..+
T Consensus       129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH  165 (349)
T 2w4o_A          129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH  165 (349)
T ss_dssp             CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999997654 5889999999999999998443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.54  E-value=6.6e-15  Score=114.76  Aligned_cols=118  Identities=19%  Similarity=0.072  Sum_probs=93.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ..+.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++.+...+..
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVK--EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEE--EcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence            45667788889999999999876  556789999999986532   2345577899999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||||+++|+|.+++.... .+++.....++.||+.||+.+++
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~  266 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS  266 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999997654 68899999999999999997664

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.53  E-value=2.9e-14  Score=105.06  Aligned_cols=115  Identities=16%  Similarity=0.160  Sum_probs=95.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++.+.+.+..+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEE--ECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence            456677889999999999876  455788999999986543  2346688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++ ++.+.+......+++.....++.|++.||+..+
T Consensus        80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH  118 (292)
T 3o0g_A           80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH  118 (292)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999986 667766665557899999999999999998544

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.53  E-value=1.9e-14  Score=113.28  Aligned_cols=115  Identities=15%  Similarity=0.094  Sum_probs=98.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.||.+.  ...+++.||+|.++....  .....+.+|+.+++.++||||+++++++.+.+..+++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEE--ETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEE--ECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            446677889999999999876  455789999999975432  2356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+.+.... .+++.....++.||+.||+..+
T Consensus       100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH  138 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH  138 (486)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987654 6899999999999999998543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.53  E-value=2.5e-14  Score=104.14  Aligned_cols=114  Identities=18%  Similarity=0.246  Sum_probs=92.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.+...+.++.|++|.+|.+.    ..|..||+|.++....    ...+.+.+|+.+++.++||||+++++.+...+.
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAF----WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN   80 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEE----ETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred             chhheeeeeeeccCCCeEEEEEE----EcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            45667788889999999999864    5689999999976432    224568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++...  .+++.....++.|+++||+..+
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH  122 (271)
T 3dtc_A           81 LCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH  122 (271)
T ss_dssp             CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998643  5889999999999999998654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.53  E-value=3.7e-14  Score=103.91  Aligned_cols=115  Identities=10%  Similarity=0.004  Sum_probs=97.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|..||+|.++....  .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEE--EcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            456677889999999999876  455688999999976543  2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+.+.... .+++.....++.|++.||+..+
T Consensus        84 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH  122 (284)
T 3kk8_A           84 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH  122 (284)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887654 5889999999999999998543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.53  E-value=2.1e-14  Score=112.94  Aligned_cols=115  Identities=17%  Similarity=0.139  Sum_probs=98.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.+.....   .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCK--DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEE--ECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            446677889999999999876  556789999999975432   335678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+.+|+|.+++.... .+++.....++.||+.||+..+
T Consensus       104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH  143 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH  143 (484)
T ss_dssp             EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999997654 5889999999999999998543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.53  E-value=2.7e-14  Score=105.15  Aligned_cols=116  Identities=17%  Similarity=0.170  Sum_probs=95.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.....++.|++|.+|.+.  ...++..||+|.++.......+.+.+|+.+++.++||||+++++.+...+..+++||
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   99 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGR--DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME   99 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEE--ETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cCCCCcEEEeecCcEEEEEEE--ECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence            334444578999999999876  455788999999987655556778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++....  ..+++..+..++.|++.||+..+
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  139 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH  139 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH
Confidence            999999999998653  34568888999999999998543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.53  E-value=2e-14  Score=108.93  Aligned_cols=119  Identities=14%  Similarity=0.049  Sum_probs=98.9

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...++.|.+...++.|++|.||++.  ...+|+.||+|.++....   .....+..|..++..+ .||+|+++++++.+.
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~   93 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSE--RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM   93 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEE--ETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC
Confidence            3466778888999999999999876  445678999999986533   2345678899999887 799999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|.+++...+ .+++.....++.||+.||..++
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  138 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ  138 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 5889999999999999998544

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.53  E-value=4e-14  Score=112.67  Aligned_cols=119  Identities=13%  Similarity=0.043  Sum_probs=100.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ...+.|.....++.|++|.||.+.  ...+|+.||+|.++....   .....+..|..++..++||||+++++++.+.+.
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~--~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~  259 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQ--MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD  259 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEE--ECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE
Confidence            455677777889999999999876  445789999999986543   224568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|+||||+++|+|..++...   ...+++.....++.||+.||..++
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH  306 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH  306 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999753   346889999999999999998543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.53  E-value=3.1e-14  Score=107.92  Aligned_cols=118  Identities=15%  Similarity=0.082  Sum_probs=100.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ...+.|...+.++.|++|.||.+.  ...++..||+|.++.... .....+.+|+.++..++||||+++++.+...+..+
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  107 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVS--HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS  107 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             cccccceeeeeecCCCCeEEEEEE--ECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence            345667788889999999999876  445688999999986532 33567889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||+++|+|.+++.... .+++.....++.|++.||+..+
T Consensus       108 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh  148 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR  148 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998654 5889999999999999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.53  E-value=4.4e-14  Score=103.50  Aligned_cols=120  Identities=17%  Similarity=0.147  Sum_probs=96.6

Q ss_pred             cCccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ...+.|.+.+.++.|++|.||.+.... ...+..||+|.++.... ...+.+.+|+..++.++||||+++++.+. .+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence            345667788889999999999876221 12355799999876432 33567889999999999999999999874 5678


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  133 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE  133 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876667899999999999999998543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.53  E-value=6.1e-14  Score=104.09  Aligned_cols=118  Identities=14%  Similarity=0.132  Sum_probs=97.9

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc---hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR---IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .+..|.+.+.++.|++|.+|.+.  ...+|..||+|.++...   ......+.+|+.+++.++|+||+++++.+...+..
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAA--CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEE--ETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEEEeecCCCCceEEEEE--EcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            45667888889999999999876  45678999999998633   23356688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++..   ....+++..+..++.|+++||+..+
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  153 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH  153 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999974   2446889999999999999998543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.53  E-value=7.6e-14  Score=104.43  Aligned_cols=119  Identities=23%  Similarity=0.255  Sum_probs=96.9

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEE--EEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKV--AIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v--avK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ...+.|.+.+.++.|++|.+|.+.  ...+|..+  |+|.++.... .....+.+|+.++..+ .||||+++++.+...+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   99 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEE--EEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             ccHHHccceeeeecCCCceEEEEE--EccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence            355667788899999999999986  44566644  9999875432 3355688999999999 8999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++|+|.+++....               ..+++..+..++.|+++||+.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  159 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS  159 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997643               36889999999999999998544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.53  E-value=2.9e-14  Score=105.94  Aligned_cols=118  Identities=12%  Similarity=-0.006  Sum_probs=99.1

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..++.|.+.+.++.|++|.+|.+.  ...+++.||+|.++....   .....+.+|+.++..++||||+++++++...+.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAE--DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEE--ETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEE--EcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            356778888999999999999876  445788999999976532   224668899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+++++|.+++.... .+++.....++.|+++||+..+
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH  151 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH  151 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998654 5889999999999999998543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.53  E-value=3.9e-14  Score=105.14  Aligned_cols=121  Identities=23%  Similarity=0.177  Sum_probs=98.9

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      +..+.+.+.+.++.|++|.+|.+...   +...+..||+|.++.... ...+.+.+|+.+++.++||||+++++.+...+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            34566777788999999999987521   123457899999986432 33567889999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-----------------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++|+|.+++....                       ..+++..+..++.||++||+..+
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  167 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA  167 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998643                       23788999999999999998544

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.52  E-value=1.9e-14  Score=106.27  Aligned_cols=118  Identities=14%  Similarity=0.132  Sum_probs=84.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.|.+.+.++.|+.|.+|.+.  ...++..||+|.++.... .....+.+|+..+..++||||+++++.+...+..++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAY--CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEE--C----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             chhhhhhhheeccccceEEEEEE--ECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            45567788899999999999876  455788999999976532 334567899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILEN-------EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~-------~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++..       ....+++..+..++.||+.||+..+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  138 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH  138 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999974       2345889999999999999998543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.52  E-value=2.2e-14  Score=108.50  Aligned_cols=97  Identities=25%  Similarity=0.318  Sum_probs=78.2

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...+.|.+.+.++.|++|.||.+.+.   ...+++.||+|.++.... .....+.+|+.++..+ +||||+++++.+...
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            34566788889999999999987532   223567999999986533 3346789999999999 789999999998875


Q ss_pred             C-cEEEEEeecCCCCHHHHHhhc
Q psy8884         136 P-HCCLLTEYCPKGSLQDILENE  157 (184)
Q Consensus       136 ~-~~~lv~e~~~~gsl~~~l~~~  157 (184)
                      + ..+++|||+++|+|.+++...
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTT
T ss_pred             CCceEEEEEecCCCcHHHHHHhc
Confidence            4 489999999999999999764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.52  E-value=4.3e-14  Score=105.46  Aligned_cols=115  Identities=14%  Similarity=0.125  Sum_probs=85.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.++.... .....+.+|+.+++.++||||+++++.+...+..++||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             --------------CEEEEEE--CSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEE--ECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            456677889999999999876  456789999999976543 23467889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQ-----FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~-----~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++ |+|.+++....     ..+++..+..++.||++||+..+
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH  125 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH  125 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999 59999987532     35889999999999999998543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.52  E-value=2.9e-14  Score=106.52  Aligned_cols=118  Identities=19%  Similarity=0.209  Sum_probs=97.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ..+.|...+.++.|++|.||.+.   ...|+.||+|.++..... ....+.+|+.++..+.||||+++++++..++..++
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l  104 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGR---LADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL  104 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEEC---CSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred             HhhccccceeEecCCCcEEEEEE---ecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence            34567777889999999999875   335889999999865432 23468899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQ---FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~---~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|||+++|+|.+++....   ..+++..+..++.|++.||+..++
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  149 (326)
T 3uim_A          105 VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD  149 (326)
T ss_dssp             EEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998642   348999999999999999986653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.52  E-value=6.4e-14  Score=103.24  Aligned_cols=117  Identities=15%  Similarity=0.139  Sum_probs=98.8

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ....|...+.++.|++|.+|.+.  ...+++.+|+|.+.....   ...+.+.+|+.+++.+.|+||+++++.+...+..
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   90 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEIS--DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV   90 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEeecCCEEEEEEE--ECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence            34567778889999999999876  445688999999976532   3355688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++++|.+++.... .+++.....++.|+++||+..+
T Consensus        91 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH  132 (294)
T 2rku_A           91 FVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH  132 (294)
T ss_dssp             EEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999887644 6889999999999999998543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.52  E-value=2.5e-14  Score=107.29  Aligned_cols=117  Identities=13%  Similarity=0.148  Sum_probs=96.8

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ..++.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAI--DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEE--ETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEE--ECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence            356778888999999999999876  556789999999976543  2244577999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||||+++ +|.+++.... .+++..+..++.||+.||+.++
T Consensus       109 ~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH  149 (329)
T 3gbz_A          109 HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH  149 (329)
T ss_dssp             EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999985 9999998754 5889999999999999998544

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.52  E-value=2.5e-14  Score=105.47  Aligned_cols=114  Identities=17%  Similarity=0.189  Sum_probs=94.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec----------
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD----------  134 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----------  134 (184)
                      .|...+.++.|++|.+|.+.  ...+|+.||+|.++... .....+.+|+.+++.++|||++++++.+..          
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cchhhheeccCCcEEEEEEE--EcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            45666788999999999876  45578999999997543 335678899999999999999999988754          


Q ss_pred             ---CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 ---PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ---~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                         .+..+++|||+++|+|.+++......+++.....++.|+++||+..+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH  133 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH  133 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH
Confidence               35689999999999999999876667788999999999999998543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=4e-14  Score=106.55  Aligned_cols=121  Identities=22%  Similarity=0.175  Sum_probs=96.7

Q ss_pred             cCccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...+.+.+.+.++.|++|.||.+...+   ...+..||+|.++.... .....+.+|+.++..+ .||||+++++.+...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            445667888899999999999876211   12456899999985432 3456789999999999 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCC----------------------CCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQF----------------------KLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~----------------------~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++.....                      .+++..+..++.||++||+.++
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  189 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE  189 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999986432                      3788999999999999998544

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.52  E-value=7.4e-15  Score=109.26  Aligned_cols=116  Identities=16%  Similarity=0.100  Sum_probs=96.1

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC---
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP---  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~---  136 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...+++.||+|.++....   .....+.+|+.++..++||||+++++.+...+   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLAR--DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred             cCcEEEEEEEccCCCEEEEEEE--ECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence            3457778889999999999876  556789999999986532   23456889999999999999999999877643   


Q ss_pred             -cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 -HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 -~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ..|+||||+++|+|.+++...+ .+++.....++.|++.||+..+
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  133 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH  133 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence             3499999999999999998654 5889999999999999998543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.52  E-value=4.7e-14  Score=104.81  Aligned_cols=114  Identities=18%  Similarity=0.195  Sum_probs=93.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|...+.++.|++|.+|.+.  ...+|+.||+|.++...  ....+.+|+.++..+.||||+++++.+...+..+++||
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAI--HKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             -CEEEEEECC----CEEEEEE--ETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhhhheeeccCCCeEEEEEE--ECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            456677889999999999876  44568899999998643  24668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++......+++.....++.|++.||+..+
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  142 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH  142 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999855557899999999999999998543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.52  E-value=3.4e-14  Score=107.48  Aligned_cols=114  Identities=20%  Similarity=0.224  Sum_probs=95.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .|...+.++.|++|.+|.+.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFAR--DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEE--EccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35566778999999999876  556789999999975432   2345688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+. |++.+++......+++..+..++.|+++||+..+
T Consensus       133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  171 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH  171 (348)
T ss_dssp             EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99998 6888888765567899999999999999998543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.51  E-value=1.5e-14  Score=106.94  Aligned_cols=117  Identities=15%  Similarity=0.069  Sum_probs=93.1

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--------------------------hhHHHHHHH
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--------------------------LTRPLLLEL  114 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--------------------------~~~~~~~e~  114 (184)
                      ..++.|.+.+.++.|++|.||.+.  ...+|+.||+|.++.....                          ..+.+.+|+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   87 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAY--NENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI   87 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEE--ETTTTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEE--ECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence            345677888899999999999876  5567889999999764321                          124578999


Q ss_pred             HHHHcCCCcchhhhheeeec--CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         115 KRLKDLHHDHLVKFIGACLD--PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       115 ~~l~~l~h~ni~~l~~~~~~--~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++.++||||+++++.+.+  .+..+++|||+++|+|.+++..  ..+++.....++.||++||+..+
T Consensus        88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH  154 (298)
T 2zv2_A           88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH  154 (298)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999886  5678999999999999886543  35899999999999999998543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.51  E-value=8.1e-14  Score=105.85  Aligned_cols=118  Identities=14%  Similarity=0.114  Sum_probs=95.4

Q ss_pred             Cccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC---CcchhhhheeeecC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH---HDHLVKFIGACLDP  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~---h~ni~~l~~~~~~~  135 (184)
                      ..+.|.+.+.++.|++|.||.+...   ....++.||+|.++...   ..++..|...+..+.   |+|++++++.+...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            3455777788999999999998421   35678899999998654   345677777777776   89999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILEN----EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~----~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..++||||+++|+|.+++..    ....+++..+..++.||++||+.+++
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~  190 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD  190 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999974    23468999999999999999995543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.51  E-value=6.5e-14  Score=105.25  Aligned_cols=117  Identities=15%  Similarity=0.139  Sum_probs=99.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ....|...+.++.|++|.+|.+.  ...+++.+|+|.+.....   ...+.+.+|+.+++.+.|+||+++++.+.+.+..
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  116 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEIS--DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV  116 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence            34567778889999999999876  445688999999976532   3356688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++++|.+++.... .+++..+..++.|+++||+..+
T Consensus       117 ~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH  158 (335)
T 2owb_A          117 FVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH  158 (335)
T ss_dssp             EEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987644 6889999999999999998543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.51  E-value=5.2e-14  Score=103.50  Aligned_cols=114  Identities=17%  Similarity=0.149  Sum_probs=96.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.++.|++|.||.+.  . ..|+.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~--~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQ--N-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEE--E-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEE--c-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEE
Confidence            346667889999999999875  2 4688999999975433  2346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++ +|.+++......+++.....++.|+++||+..+
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  117 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH  117 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            999986 899999876567899999999999999998544

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.51  E-value=3.7e-14  Score=106.27  Aligned_cols=113  Identities=14%  Similarity=-0.089  Sum_probs=96.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.+.....  ...+.+|+.+++.+ .|+||+++++++...+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGK--NLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEE--ETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEE--ECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            346677889999999999876  557889999999875432  34588999999999 9999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+ +|+|.+++......+++..+..++.|++.||+.++
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  122 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH  122 (330)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999 89999999876557899999999999999998543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.51  E-value=2.3e-14  Score=104.51  Aligned_cols=115  Identities=21%  Similarity=0.158  Sum_probs=97.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|+.|.+|.+.  ...+++.||+|.++.... ...+.+.+|+.+++.++||||+++++.+...+..++++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEE--ECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            446677889999999999876  445788999999976543 33567889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.... .+++.....++.|+++||+..+
T Consensus        85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH  122 (276)
T 2yex_A           85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH  122 (276)
T ss_dssp             ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987543 5889999999999999998543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.51  E-value=3.8e-14  Score=105.15  Aligned_cols=121  Identities=24%  Similarity=0.186  Sum_probs=99.5

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...+.+.+.+.++.|++|.+|.+...   ....+..||+|.++.... ...+.+.+|+.++..+ +||||+++++.+..+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   99 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence            34566778888999999999987521   123467999999986543 3356788999999999 999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCC-----------------CCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQF-----------------KLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~-----------------~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++.....                 .+++..+..++.|+++||+..+
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  162 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA  162 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999986432                 3789999999999999998544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.51  E-value=2.7e-14  Score=109.00  Aligned_cols=119  Identities=17%  Similarity=0.028  Sum_probs=92.7

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHHHHHH-HHcCCCcchhhhheeeecC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLLELKR-LKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~e~~~-l~~l~h~ni~~l~~~~~~~  135 (184)
                      ....+.|.+.+.++.|++|.||++.  ...++..||+|.++.....   ....+..|..+ ++.++||||+++++++.+.
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~--~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~  111 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLAR--HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA  111 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEE--ETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEE--EcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC
Confidence            3456778888999999999999876  4556889999999875432   23345666665 5678999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+++|+|.+++.+.+ .+++.....++.||+.||+.++
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  156 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH  156 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998654 5788889999999999998543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.51  E-value=7.2e-14  Score=104.87  Aligned_cols=120  Identities=18%  Similarity=0.176  Sum_probs=96.7

Q ss_pred             Cccccccchhhhhhcccceeeeccee-----eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeec
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL-----LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLD  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~  134 (184)
                      ..+.+.+.+.++.|++|.||.+...+     ...+..||+|.++.... .....+.+|+.++..+ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            44667788889999999999875221     13567899999986533 3356788999999999 89999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+..++||||+++|+|.+++....               ..+++..+..++.||++||+..+
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  174 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA  174 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998643               23788999999999999998543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.51  E-value=4.2e-14  Score=104.99  Aligned_cols=115  Identities=19%  Similarity=0.161  Sum_probs=96.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.++.|++|.+|.+.  ...+|+.||+|.+.....  .....+.+|+.++..++||||+++++.+...+..+++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCR--NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEE--eCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            346667889999999999876  445688999999865433  2345678999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||++++++.+++.... .+++.....++.|+++||+..+
T Consensus        81 ~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH  119 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH  119 (311)
T ss_dssp             EECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999998887544 5889999999999999998543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.51  E-value=6.1e-14  Score=103.43  Aligned_cols=116  Identities=15%  Similarity=0.080  Sum_probs=97.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---------hhhHHHHHHHHHHHcCC-Ccchhhhheee
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---------DLTRPLLLELKRLKDLH-HDHLVKFIGAC  132 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---------~~~~~~~~e~~~l~~l~-h~ni~~l~~~~  132 (184)
                      .+.|...+.++.|+.|.+|.+.  ...+|+.||+|.++....         ...+.+.+|+.++..+. ||||+++++.+
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCI--HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhccceeeeecCCCceEEEEEE--EcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            4567777889999999999876  445788999999976431         22456789999999995 99999999999


Q ss_pred             ecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         133 LDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       133 ~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ...+..+++|||+++|+|.+++.... .+++.....++.|++.||+..+
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  141 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH  141 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998653 6889999999999999998543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.51  E-value=2.2e-14  Score=108.31  Aligned_cols=111  Identities=13%  Similarity=0.001  Sum_probs=93.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.....    ..+|+.++..+ .||||+++++++.+.+..|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCI--HKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEE--ECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            446777889999999999876  4557889999999865432    34677777777 7999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++...+ .+++.....++.||+.||+..+
T Consensus        96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH  133 (342)
T 2qr7_A           96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH  133 (342)
T ss_dssp             CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654 6899999999999999998543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.51  E-value=4e-14  Score=103.50  Aligned_cols=117  Identities=15%  Similarity=0.181  Sum_probs=96.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeee--cCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACL--DPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~--~~~~~  138 (184)
                      .+.|...+.++.|++|.+|.+.  ...+|+.||+|.++....  ...+.+.+|+.+++.++||||+++++.+.  ..+..
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIR--RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             hhheeeehhccCCCCcEEEEEE--ECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            4567777889999999999876  445789999999986532  33566889999999999999999999874  35789


Q ss_pred             EEEEeecCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~---~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++...   ...+++..+..++.|++.||+..+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  128 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH  128 (279)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999753   234899999999999999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.51  E-value=7.4e-14  Score=104.68  Aligned_cols=117  Identities=19%  Similarity=0.138  Sum_probs=98.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .++.|...+.++.|++|.+|.+.  ...+|+.||+|.+.....  .....+.+|+.++..++||||+++++.+...+..+
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  100 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCR--NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY  100 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEE--ETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEE--ECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence            45667888899999999999876  445688999999875433  23455789999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||++++++.+++.... .+++..+..++.|++.||+.++
T Consensus       101 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH  141 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH  141 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999998888766543 5899999999999999998443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.50  E-value=7.3e-14  Score=103.96  Aligned_cols=116  Identities=18%  Similarity=0.179  Sum_probs=96.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      -.+.|...+.++.|++|.||.+.  . ..|+.||+|.++....  .....+.+|+.+++.++||||+++++.+.+.+..+
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~--~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   95 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAK--D-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT   95 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEE--E-TTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEE--E-CCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence            45677888899999999999876  2 3588999999975433  22456889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||+++ ++.+.+......+++.....++.|++.||+.++
T Consensus        96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH  136 (311)
T 3niz_A           96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH  136 (311)
T ss_dssp             EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999985 888888876667899999999999999998543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.50  E-value=6.1e-14  Score=103.23  Aligned_cols=118  Identities=18%  Similarity=0.169  Sum_probs=94.1

Q ss_pred             Cccccccch-hhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNS-LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ....+.+.+ .++.|++|.+|.+.+.....+..||+|.++....  ...+.+.+|+.+++.++||||+++++.+ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            344566666 8899999999987533344578999999986533  2356788999999999999999999998 56778


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++.... .+++.....++.|+++||+.++
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH  134 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE  134 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998754 5889999999999999998543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.50  E-value=8e-14  Score=102.43  Aligned_cols=115  Identities=15%  Similarity=0.097  Sum_probs=97.8

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .+.|.+.+.++.|+.|.+|.+.  ...+++.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..++
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~--~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEE--EcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            3457777889999999999876  445788999999976433  335678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ++||+++++|.+++.... .+++..+..++.|++.||+.+
T Consensus        99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L  137 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM  137 (287)
T ss_dssp             EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999887654 588999999999999999854

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.50  E-value=1.9e-14  Score=108.44  Aligned_cols=117  Identities=12%  Similarity=0.083  Sum_probs=99.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhh---h--------------HHHHHHHHHHHcCCCcc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDL---T--------------RPLLLELKRLKDLHHDH  124 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~---~--------------~~~~~e~~~l~~l~h~n  124 (184)
                      ..+.|.+.+.++.|++|.+|.+.    .+|+.||+|.+.......   .              ..+.+|+.++..++|||
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~  104 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCE----KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY  104 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEE----ETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred             ccCceEEEEEEcCCCCeEEEEEE----cCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence            45667888889999999999875    389999999998653321   1              77899999999999999


Q ss_pred             hhhhheeeecCCcEEEEEeecCCCCHHHH------Hhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         125 LVKFIGACLDPPHCCLLTEYCPKGSLQDI------LENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       125 i~~l~~~~~~~~~~~lv~e~~~~gsl~~~------l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++++.+...+..+++|||+++|+|.++      +... ...+++..+..++.|++.||+..++
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  169 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN  169 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998      6542 4568999999999999999987664

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.50  E-value=1e-13  Score=103.40  Aligned_cols=120  Identities=14%  Similarity=0.095  Sum_probs=98.1

Q ss_pred             Cccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.+.+.+.++.|++|.+|.+...+.   ..+..||+|.++.... .....+.+|+.+++.+.|+||+++++.+.+.+.
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~  102 (322)
T 1p4o_A           23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP  102 (322)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence            345677788899999999998763322   3467899999976433 334568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ---------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~---------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++....         ..+++..+..++.|++.||+..+
T Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  155 (322)
T 1p4o_A          103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN  155 (322)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997532         34688999999999999998543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.50  E-value=1.1e-13  Score=105.92  Aligned_cols=120  Identities=20%  Similarity=0.214  Sum_probs=97.8

Q ss_pred             Cccccccchhhhhhcccceeeecceee-----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeec
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL-----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLD  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~  134 (184)
                      ..+.+.+.+.++.|++|.||.+...+.     ..+..||+|.++.... .....+.+|+.++..+ +||||+++++.+..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            345677778899999999998762111     2235799999986533 3356788999999999 89999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+..++||||+++|+|.+++....               ..+++..+..++.||+.||+.++
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  208 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA  208 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998643               34899999999999999998543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.49  E-value=8.4e-14  Score=103.02  Aligned_cols=114  Identities=18%  Similarity=0.121  Sum_probs=96.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|++|.+|.+.  ...+++.||+|.++.... .....+.+|+.++..+.|+||+++++.+...+..+++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEE--ECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            346667789999999999875  445788999999986543 33567889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++...  .+++.....++.|++.||+..+
T Consensus       100 e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH  136 (303)
T 3a7i_A          100 EYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH  136 (303)
T ss_dssp             ECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999753  5889999999999999998543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.49  E-value=1.3e-13  Score=101.43  Aligned_cols=116  Identities=16%  Similarity=0.080  Sum_probs=95.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec----CCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~  137 (184)
                      ..+.+...++.|++|.+|.+.  ...++..||+|.++....  ...+.+.+|+.+++.++||||+++++.+..    ...
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~--~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred             eeEEeeeeccCCCCeEEEEeE--ecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence            345666778999999999876  455788999999986543  335678899999999999999999998764    356


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++|+|.+++.... .+++..+..++.|++.||+..++
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~  147 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT  147 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHc
Confidence            899999999999999998644 58899999999999999986654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.48  E-value=1.6e-13  Score=101.94  Aligned_cols=113  Identities=20%  Similarity=0.278  Sum_probs=94.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+.+.+.+.++.|++|.+|.+.    ..++.||+|.++...  ..+.+.+|+..++.++||||+++++.+.  +..+++
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv   77 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAK----WRAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV   77 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEE----ETTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEE
T ss_pred             CHhHeeeeeEeecCCCceEEEEE----ECCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEE
Confidence            44567777889999999998864    568899999997543  3467889999999999999999999876  457999


Q ss_pred             EeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++....  ..+++.....++.|+++||+.+++
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  120 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS  120 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998643  246788899999999999987665

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.48  E-value=1.1e-13  Score=103.18  Aligned_cols=119  Identities=20%  Similarity=0.185  Sum_probs=88.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecC---cEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEG---NKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      ...+.|.+.+.++.|++|.+|.+.  ....+   ..||+|.++....  ...+.+.+|+.+++.++||||+++++++...
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQ--LKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEE--C-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             cChhHeEEeceecccCCeEEEEEE--EcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            344567788899999999999876  22233   3899999986532  3356789999999999999999999998876


Q ss_pred             CcE------EEEEeecCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHC------CLLTEYCPKGSLQDILENEQ-----FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~------~lv~e~~~~gsl~~~l~~~~-----~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..      ++++||+++|+|.+++....     ..+++..+..++.|+++||+..+
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH  154 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS  154 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            554      99999999999999996432     25889999999999999998543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.48  E-value=8.1e-14  Score=104.42  Aligned_cols=121  Identities=22%  Similarity=0.210  Sum_probs=98.0

Q ss_pred             cCccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      ...+.+.+.+.++.|++|.||.+....   ...+..||+|.++.... .....+.+|+.++..+ .||||+++++++...
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            445667888899999999999876211   12335899999986533 3356788999999999 899999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE-------------QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~-------------~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++...             ...+++..+..++.|++.||+..+
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  181 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA  181 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999753             234788999999999999998544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.48  E-value=4.9e-14  Score=109.08  Aligned_cols=114  Identities=16%  Similarity=0.100  Sum_probs=92.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--------hhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--------LTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +.|.+.+.++.|++|.||.+.  ...+++.||+|.+......        ....+.+|+.+++.++||||+++++++.. 
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAF--ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             ccEEEEeEEeeCCCeEEEEEE--ECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            346667779999999999876  5567889999999764321        12347899999999999999999998764 


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++.... .+++.....++.|++.||+.++
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH  256 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH  256 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            55799999999999999887644 6899999999999999998544

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.48  E-value=1.1e-13  Score=103.59  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=91.6

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ..+.|...+.++.|++|.||.+.  ...++.    +||+|.++.... .....+.+|+.+++.++||||+++++++..++
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   90 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGL--WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEE--ECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred             CHHHcccceEEeeCCCeEEEEEE--EcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence            34556777889999999999876  222333    578888865433 33567899999999999999999999998754


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       .++++||+.+|+|.+++......+++..+..++.||+.||+.++
T Consensus        91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH  134 (327)
T 3poz_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE  134 (327)
T ss_dssp             -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence             78999999999999999886667899999999999999998544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.48  E-value=3.1e-13  Score=100.42  Aligned_cols=124  Identities=14%  Similarity=0.128  Sum_probs=93.5

Q ss_pred             cccCccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      -....+.+.+.+.++.|++|.+|.+.... ..++..||+|.++....  .....+.+|+.+++.++||||+++++++...
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            33455677888889999999999875211 11345899999986532  3346688999999999999999999998765


Q ss_pred             C-----cEEEEEeecCCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 P-----HCCLLTEYCPKGSLQDILEN-----EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~-----~~~lv~e~~~~gsl~~~l~~-----~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +     ..++++||+++|+|.+++..     ....+++..+..++.|+++||+..++
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  165 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN  165 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence            4     45999999999999999953     23468999999999999999995543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.48  E-value=3.8e-14  Score=106.63  Aligned_cols=115  Identities=18%  Similarity=0.169  Sum_probs=93.6

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .|.+.+.++.|++|.+|.+.  ...++..||+|.++....     ...+.+.+|+.+++.++||||+++++.+.+.+..+
T Consensus        27 ~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           27 KYHLKGAIGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             heeecceeeecCCeEEEEEE--ECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            35667889999999999876  456788999999976432     33567889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhc---------------------------------------CCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         140 LLTEYCPKGSLQDILENE---------------------------------------QFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~---------------------------------------~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +||||+++|+|.+++...                                       ...+++.....++.||++||+..
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999998521                                       11235667888999999999854


Q ss_pred             c
Q psy8884         181 I  181 (184)
Q Consensus       181 ~  181 (184)
                      +
T Consensus       185 H  185 (345)
T 3hko_A          185 H  185 (345)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=2.2e-13  Score=100.32  Aligned_cols=115  Identities=17%  Similarity=0.087  Sum_probs=92.3

Q ss_pred             ccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE-EEEEe
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC-CLLTE  143 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~-~lv~e  143 (184)
                      ...+.++.|++|.||.+..... ..+..+|+|.++.... ...+.+.+|+.+++.++||||+++++++.+.+.. ++++|
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            3457799999999998752111 1223799999976433 3356788999999999999999999999876555 99999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+.+|+|.+++......+++..+..++.|++.||+..+
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  141 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA  141 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876667889999999999999998543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.47  E-value=1.5e-13  Score=111.57  Aligned_cols=109  Identities=19%  Similarity=0.173  Sum_probs=90.3

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .++.|++|.||.+.+.....++.||+|.++....  ...+.+.+|+.++..++||||+++++++.. +..++||||+++|
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g  454 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG  454 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence            5788888889887533344567999999986543  235679999999999999999999999864 5689999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|.+++.... .+++..+..++.||+.||+.++
T Consensus       455 ~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH  486 (635)
T 4fl3_A          455 PLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE  486 (635)
T ss_dssp             EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999997654 6889999999999999998543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.47  E-value=8.5e-14  Score=103.94  Aligned_cols=114  Identities=18%  Similarity=0.113  Sum_probs=91.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+++.||+|.++....        .....+.+|+.+++.++||||+++++++...
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAF--ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hceeEeeEEecCCCEEEEEEE--EcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            346677889999999999876  445688999999975432        1233578999999999999999999998765


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      + .+++|||+++|+|.+++.... .+++.....++.||++||+.++
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH  131 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH  131 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            4 899999999999999987644 6889999999999999998544

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.47  E-value=2.4e-13  Score=101.37  Aligned_cols=115  Identities=23%  Similarity=0.200  Sum_probs=94.1

Q ss_pred             ccccchhhhhhcccceeeecce--eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKE--LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~~  139 (184)
                      .+...+.++.|++|.||++.+.  ...+|+.||+|.++.... .....+.+|+.+++.++||||+++++++.+  ....+
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            3467788999999999775432  345788999999986533 335668899999999999999999999887  46789


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||+++|+|.+++....  +++..+..++.|++.||+.++
T Consensus       112 lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH  151 (318)
T 3lxp_A          112 LVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH  151 (318)
T ss_dssp             EEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997654  889999999999999998543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.46  E-value=3.1e-14  Score=106.56  Aligned_cols=115  Identities=17%  Similarity=0.111  Sum_probs=93.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|...+.++.|++|.||.+.  ...+++.||+|.++..... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGK--SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEE--ECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            456677889999999999876  4457889999999764432 1224557999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++ |++.+++...+..+++.....++.|++.||+..+
T Consensus        80 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  117 (324)
T 3mtl_A           80 EYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH  117 (324)
T ss_dssp             ECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9998 5899999877667899999999999999998543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.46  E-value=1.8e-13  Score=100.20  Aligned_cols=119  Identities=22%  Similarity=0.192  Sum_probs=95.9

Q ss_pred             Cccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+.+.+.++.|++|.+|.+.... ...+..||+|.++... ....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            44567778889999999999875221 1123469999998653 2345678899999999999999999998765 4568


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||+++|+|.+++......+++.....++.|+++||+..+
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  130 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE  130 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876667899999999999999998544

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.46  E-value=1.7e-13  Score=101.03  Aligned_cols=116  Identities=16%  Similarity=0.157  Sum_probs=93.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      ++.|...+.++.|++|.+|.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL   79 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEE--EcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEE
Confidence            3556777889999999999876  445789999999976432  234678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+. |+|.+++.... ..+++.....++.|+++||+..+
T Consensus        80 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  120 (299)
T 2r3i_A           80 VFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH  120 (299)
T ss_dssp             EEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            999998 59999997643 45789999999999999998543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.46  E-value=2.2e-13  Score=101.22  Aligned_cols=113  Identities=17%  Similarity=0.104  Sum_probs=88.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeee----------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL----------  133 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~----------  133 (184)
                      +.|...+.++.|++|.+|.+.  ...+|+.||+|.+........+.+.+|+.+++.++||||+++++.+.          
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAV--DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TTEEEEEECC-----CEEEEE--ETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             CceeEEEEeccCCCeEEEEEE--ECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            346667889999999999876  44568899999998766555677899999999999999999988763          


Q ss_pred             ----cCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         134 ----DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       134 ----~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                          ..+..+++|||++ |+|.+++.+.  .+++.....++.|+++||+.++
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH  137 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH  137 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH
Confidence                3467899999998 6999999653  4788999999999999998543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.46  E-value=9.6e-14  Score=104.42  Aligned_cols=115  Identities=13%  Similarity=0.108  Sum_probs=96.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--------hhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--------LTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--------~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.++.....        ....+.+|+.+++.++||||+++++++...
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAV--DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEE--ETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cceEEEeEEEecCCEEEEEEE--ECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            456777889999999999886  5567899999999865321        233567899999999999999999999999


Q ss_pred             CcEEEEEeecCCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKG-SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~g-sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+.+| +|.+++.... .+++..+..++.|++.||+..+
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH  147 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR  147 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999777 9999997654 5899999999999999998543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.45  E-value=2.3e-13  Score=103.44  Aligned_cols=113  Identities=16%  Similarity=0.132  Sum_probs=93.7

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      .|...+.++.|+.|.||.+.  ...+|+.||+|+++....        ...+.+.+|+.++..+ .||||+++++.+...
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~--~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCV--HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hcccceEEecCCCEEEEEEE--ECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            35555778889999999876  334689999999976431        1234577899999998 799999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +..+++|||+++|+|.+++.... .+++.....++.||+.||...
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L  216 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFL  216 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998643 689999999999999999843

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.45  E-value=2.6e-13  Score=110.78  Aligned_cols=117  Identities=15%  Similarity=0.041  Sum_probs=98.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      .++.|.+...++.|++|.||++.  ...+++.||+|.++....   .....+..|..++..+ .|++|+.+++++.+.+.
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~--~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSE--RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEE--ESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             cccceEEEEEEccCCCEEEEEEE--ECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            45667788889999999999876  455788999999986532   3355678899999887 79999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+||||+++|+|..++...+ .+++..+..++.||+.||+.++
T Consensus       417 ~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  459 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ  459 (674)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998754 5899999999999999998543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.45  E-value=3e-13  Score=99.77  Aligned_cols=118  Identities=17%  Similarity=0.092  Sum_probs=93.5

Q ss_pred             cccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeee-cCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACL-DPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~-~~~~~~l  140 (184)
                      ..+.+.+.++.|++|.+|.+.... ......+|+|.++.... ...+.+.+|+.+++.++||||+++++.+. ..+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            346667889999999999875211 11234689999876432 34567889999999999999999999854 4567899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+++|+|.+++......+++..+..++.|+++||+..+
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH  145 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA  145 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876667899999999999999998543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.45  E-value=2.2e-13  Score=101.34  Aligned_cols=115  Identities=16%  Similarity=0.019  Sum_probs=91.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~l  140 (184)
                      +.|...+.++.|++|.||++.  ...+|+.||+|.+.....  ........|+..+..+ .|+||+++++++.+.+..++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l  134 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVR--SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL  134 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE--ETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeheeccCCCeEEEEEE--ECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence            446677789999999999876  445789999999865422  2233455565555554 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|||+ +|+|.+++...+..+++..+..++.||+.||+.++
T Consensus       135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  174 (311)
T 3p1a_A          135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH  174 (311)
T ss_dssp             EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999 66999998876667999999999999999998544

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.45  E-value=1.5e-13  Score=100.51  Aligned_cols=115  Identities=22%  Similarity=0.213  Sum_probs=94.4

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC-CcEE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-PHCC  139 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-~~~~  139 (184)
                      ...+.+.+.+.++.|+.|.+|.+.    ..|..||+|.++...  ..+.+.+|+.++..++|||++++++.+... +..+
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGD----YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEE----ETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCE
T ss_pred             CChhhceEEeEEecCCCceEEEEE----EcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceE
Confidence            345678888899999999999764    578999999998643  356788999999999999999999986554 5789


Q ss_pred             EEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++||+++|+|.+++.... ..+++..+..++.|+++||+..+
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH  134 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE  134 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997643 23788999999999999998543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.45  E-value=3.6e-13  Score=99.33  Aligned_cols=110  Identities=17%  Similarity=0.166  Sum_probs=89.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc--CCCcchhhhheeeec----CC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD--LHHDHLVKFIGACLD----PP  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~ni~~l~~~~~~----~~  136 (184)
                      .+.|.+.+.++.|++|.+|.+.    .+|+.||+|.++...   ...+..|..++..  ++||||+++++.+..    .+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGS----WQGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEE----ETTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEE----ECCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence            3456777889999999999764    589999999997653   3345566666665  799999999988654    35


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++|+|.++++..  .+++.....++.|+++||+..+
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999653  5889999999999999999877

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.44  E-value=4.5e-13  Score=99.22  Aligned_cols=110  Identities=24%  Similarity=0.218  Sum_probs=92.1

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccc----hhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR----IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~----~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      ..+.++.|++|.+|.+.    ..+..||+|.+....    ....+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus        35 ~~~~lg~G~~g~Vy~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGY----VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TCCEEEECSSEEEEEEE----SSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cCCccccCCCeEEEEEE----ECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            33678889888888764    478899999997532    1235678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENE--QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~--~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++...  ...+++..+..++.|++.||+..+
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  150 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH  150 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999743  345899999999999999998543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.44  E-value=3.8e-13  Score=99.09  Aligned_cols=114  Identities=15%  Similarity=-0.057  Sum_probs=97.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++....  ...+.+|+..+..+ .|+|++++++++......+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGT--NLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEE--ETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEE--ECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            456777889999999999876  556789999999875432  34578899999999 7999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+ +|+|.+++...+..+++..+..++.||+.||+..++
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~  124 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE  124 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999 999999998766568999999999999999985543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.44  E-value=2.2e-13  Score=99.66  Aligned_cols=111  Identities=19%  Similarity=0.199  Sum_probs=91.5

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec----------
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD----------  134 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----------  134 (184)
                      .|...+.++.|++|.+|.+.  ...+|+.||+|.++...    ..+.+|+.++..++||||+++++++..          
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAK--HRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEE--ETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccceeeeeccCCceEEEEEE--EcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            35666788999999999876  44468999999998653    346789999999999999999998753          


Q ss_pred             ------CCcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 ------PPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ------~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                            ....+++|||+++|+|.+++... ...+++..+..++.|++.||+..+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  139 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH  139 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                  34579999999999999999754 346889999999999999998543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.44  E-value=3e-13  Score=99.49  Aligned_cols=115  Identities=17%  Similarity=0.132  Sum_probs=92.4

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .....+.+.+.++.|++|.||.+.     ....+|+|.++....  ...+.+.+|+.+++.++|+||+++++++ ..+..
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~   94 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL   94 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEE-----SSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred             cCccceeeeeEecCCCCeEEEEEE-----EcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence            344567778889999999999864     234699999976532  3356788999999999999999999865 45678


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH  137 (289)
T 3og7_A           95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH  137 (289)
T ss_dssp             EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999776667899999999999999998543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.44  E-value=4.3e-14  Score=106.17  Aligned_cols=114  Identities=13%  Similarity=0.030  Sum_probs=91.2

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcCC------------
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDLH------------  121 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~------------  121 (184)
                      ..+.|...+.++.|++|.||.+.    .+|+.||+|.++....        ...+.+.+|+.+++.++            
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~----~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~n   93 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTI----ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEG   93 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEE----ETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCC
T ss_pred             ccccchheeeecccCceEEEEEE----eCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCc
Confidence            34567777889999999999875    4789999999986532        12366888999888876            


Q ss_pred             --------------Ccchhhhheeeec-------------CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHH
Q psy8884         122 --------------HDHLVKFIGACLD-------------PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAA  174 (184)
Q Consensus       122 --------------h~ni~~l~~~~~~-------------~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~  174 (184)
                                    ||||+++++.+.+             .+..|+||||+++|++.+.+.+  ..+++.....++.||+
T Consensus        94 iv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           94 FIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLT  171 (336)
T ss_dssp             BCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHH
T ss_pred             hhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHH
Confidence                          7777777777665             6889999999999987777754  3578999999999999


Q ss_pred             HHhhhcc
Q psy8884         175 FNRVLRI  181 (184)
Q Consensus       175 ~gl~~~~  181 (184)
                      .||+..+
T Consensus       172 ~aL~~lH  178 (336)
T 2vuw_A          172 ASLAVAE  178 (336)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=3e-13  Score=103.19  Aligned_cols=116  Identities=17%  Similarity=0.116  Sum_probs=92.3

Q ss_pred             cccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~lv~  142 (184)
                      +.+.+.++.|++|.||.+..... ..+..||+|.++.... .....+.+|+.+++.++||||+++++.+.. .+..+++|
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            45567899999999998752110 1124689999875432 345678999999999999999999998654 46789999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++......+++..+..++.||++||+.++
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  209 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA  209 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876667889999999999999998543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.44  E-value=3.7e-13  Score=105.21  Aligned_cols=114  Identities=16%  Similarity=0.113  Sum_probs=86.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeec-----CC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLD-----PP  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-----~~  136 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.||+|.+....  ......+.+|+.+++.++|+||+++++++..     ..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAY--DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             TTEEECCC-------CEEEEE--ECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CCeEEeeEeeecCCeEEEEEE--ECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            557888899999999999986  56678999999997532  2335678899999999999999999999844     35


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+|+||||+. |+|.+++.... .+++..+..++.||+.||+..+
T Consensus       131 ~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH  173 (458)
T 3rp9_A          131 ELYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH  173 (458)
T ss_dssp             CEEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            6899999975 68999987643 6899999999999999998544

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=1.3e-13  Score=104.00  Aligned_cols=117  Identities=18%  Similarity=0.203  Sum_probs=92.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ..+.|...+.++.|++|.+|.+.  ...+|+.||+|.++....     .....+.+|+.+++.++||||+++++.+...+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEE--CSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HhcccEEEeEEeecCCEEEEEEE--ECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            34567777889999999999876  445689999999975432     12346789999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+++ ++..++......+++..+..++.|+++||+..+
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  129 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH  129 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999996 899998876667888899999999999998543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.44  E-value=4.8e-13  Score=103.89  Aligned_cols=115  Identities=13%  Similarity=0.131  Sum_probs=95.8

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+|+.||+|.++...  ......+.+|+.+++.++|+||+++++.+...     
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAY--DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEE--ETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             cCCEEEEEEEeecCCEEEEEEE--ECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            3567788899999999999986  55678899999997542  23356788999999999999999999998765     


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..|+||||+. |+|.+++.... .+++.....++.||++||+..+
T Consensus       103 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH  146 (432)
T 3n9x_A          103 DELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH  146 (432)
T ss_dssp             CCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            56999999987 59999997643 6899999999999999998543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.44  E-value=7.4e-13  Score=99.43  Aligned_cols=109  Identities=18%  Similarity=0.145  Sum_probs=92.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc--CCCcchhhhheeeecCC----c
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD--LHHDHLVKFIGACLDPP----H  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~ni~~l~~~~~~~~----~  137 (184)
                      +.|.+.+.++.|++|.+|.+.    .+|+.||+|.++...   ...+.+|..++..  ++||||+++++.+...+    .
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~----~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGK----WRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEE----ETTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             ccEEEEeeecCCCCcEEEEEE----EcCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            456777889999999998864    578999999997543   3456788888877  79999999999988765    7


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++.+.  .+++..+..++.|++.||+..+
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999764  4789999999999999999876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.44  E-value=3e-13  Score=98.86  Aligned_cols=114  Identities=22%  Similarity=0.217  Sum_probs=93.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.+.++.|++|.+|.+.   ...+..||+|.++.... ..+.+.+|+.+++.++||||+++++.+. .+..+++|
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~---~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEE---ETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEE---EcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence            3567777889999999999875   23456899999976543 2567889999999999999999999876 45689999


Q ss_pred             eecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+++|+|.+++.... ..+++..+..++.|+++||+..+
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  126 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE  126 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997542 35889999999999999998543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.43  E-value=3.3e-13  Score=100.74  Aligned_cols=116  Identities=19%  Similarity=0.215  Sum_probs=96.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeec------C
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLD------P  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~------~  135 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.... ....+.+|+..+..+ .||||+++++.+..      .
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGR--HVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             CCcEEEEEEeccCCCEEEEEEE--ECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            4556777889999999999876  445788999999976532 356788999999998 79999999999876      4


Q ss_pred             CcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+++|+|.+++... ...+++.....++.||+.||+..+
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH  146 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999864 346889999999999999998544

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.43  E-value=2e-13  Score=101.41  Aligned_cols=121  Identities=21%  Similarity=0.206  Sum_probs=96.8

Q ss_pred             cCccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~  135 (184)
                      +..+.|.+.+.++.|++|.+|.+...   ....++.||+|.++.... .....+.+|+.++..+ +||||+++++.+...
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            34566788888999999999987522   123567999999986543 3345688999999999 789999999998765


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCC---------------CCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQF---------------KLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~---------------~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ...+++|||+++|+|.+++.....               .+++..+..++.|+++||+..+
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  165 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA  165 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence             458999999999999999986542               2788999999999999998544

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=1.6e-13  Score=104.01  Aligned_cols=120  Identities=18%  Similarity=0.101  Sum_probs=98.3

Q ss_pred             cCccccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcC-CCcchhhhheeeec
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDL-HHDHLVKFIGACLD  134 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~  134 (184)
                      ...+.|.+.+.++.|++|.||.+... +..+|+.||+|.++....    .....+.+|+.++..+ .|+||+++++.+..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  130 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  130 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence            34567888889999999999987521 124788999999976432    2245567899999998 69999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+..++||||+++|+|.+++.... .+++..+..++.||++||+.++
T Consensus       131 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH  176 (355)
T 1vzo_A          131 ETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH  176 (355)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998654 5889999999999999998543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.43  E-value=1.3e-13  Score=103.22  Aligned_cols=118  Identities=22%  Similarity=0.223  Sum_probs=94.4

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      +..+.|...+.++.|++|.||.+.  ...++.    +||+|.+..... .....+.+|+.+++.++||||+++++++. .
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   86 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGV--WIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-G   86 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEE--ECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-B
T ss_pred             cCHhHceeeeeeeecCCceEEEEE--EcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-C
Confidence            345567777889999999999976  333444    488888764432 23455778999999999999999999886 4


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..++++||+++|+|.+++......+++..+..++.|++.||+..+
T Consensus        87 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  132 (325)
T 3kex_A           87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE  132 (325)
T ss_dssp             SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH
Confidence            6689999999999999999876557889999999999999998543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.43  E-value=4.8e-13  Score=101.00  Aligned_cols=117  Identities=20%  Similarity=0.194  Sum_probs=95.9

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec-----
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD-----  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-----  134 (184)
                      ..+.|...+.++.|++|.||.+.  ...+|+.||+|.+.....  .....+.+|+.+++.++||||+++++.+..     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKAR--HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEE--ETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             cccceeEEEEEecCCCcEEEEEE--ECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            34567788889999999999886  456789999999865533  234567899999999999999999998876     


Q ss_pred             ---CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 ---PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ---~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                         .+..++||||+++ ++.+.+......+++..+..++.|++.||+.++
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH  141 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH  141 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence               3468999999985 788888766557899999999999999998543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.43  E-value=5.5e-13  Score=100.95  Aligned_cols=115  Identities=17%  Similarity=0.117  Sum_probs=95.6

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-----CcchhhhheeeecCCc
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-----HDHLVKFIGACLDPPH  137 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----h~ni~~l~~~~~~~~~  137 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+++.||+|.++... .....+..|..++..+.     |+||+++++.+...+.
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQ--HIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             cCEEEEEEEEcccCCeEEEEEE--ECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            3457777889999999999876  44578899999997543 22455678888998886     9999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+ +|+|.+++.... ..+++..+..++.||+.||+..+
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  154 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR  154 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999 889999998653 35889999999999999998554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.42  E-value=6.9e-13  Score=97.32  Aligned_cols=118  Identities=11%  Similarity=0.008  Sum_probs=92.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.|...+.++.|++|.+|.+.  ...+|+.||+|.++....  .....+..+...++.+.||||+++++.+...+..+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMR--HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEE--ecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            34567777889999999999876  456789999999976532  22233444555578889999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++ ++.+++..   ....+++..+..++.|++.||+..++
T Consensus        83 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (290)
T 3fme_A           83 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS  127 (290)
T ss_dssp             EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            99999985 88887754   34578999999999999999986653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.42  E-value=6e-14  Score=104.43  Aligned_cols=119  Identities=18%  Similarity=0.291  Sum_probs=98.7

Q ss_pred             hhcccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec
Q psy8884          57 ENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD  134 (184)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~  134 (184)
                      .......+.+...+.++.|++|.+|.+.    .. ..+|+|.++....  ...+.+.+|+.+++.++|+||+++++.+..
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~----~~-~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGR----WH-GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS  100 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEE----ES-SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEE----Ec-CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            3344566778888999999999999864    23 3599999975432  224457789999999999999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      .+..++++||+++|+|.+++...+..+++..+..++.||+.||+..
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l  146 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL  146 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999987666788999999999999999844

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.42  E-value=6.3e-13  Score=99.58  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=95.1

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCc----EEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGN----KVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ....|...+.++.|++|.||.+.  ...++.    +||+|.++.... .....+.+|+.++..++||||+++++.+..++
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGL--WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEE--ECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             CHhHceEEEEeeeCCCeEEEEEE--EcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            34557777889999999999876  333444    467887765432 34567889999999999999999999988654


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       .+++++|+.+|+|.+++......+++..+..++.|++.||+..+
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  134 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE  134 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence             78999999999999999876667899999999999999998544

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.42  E-value=1e-12  Score=98.46  Aligned_cols=110  Identities=18%  Similarity=0.201  Sum_probs=89.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHc--CCCcchhhhheeeecC----Cc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKD--LHHDHLVKFIGACLDP----PH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~ni~~l~~~~~~~----~~  137 (184)
                      +.|.+.+.++.|++|.||.+.    .+|+.||+|.+....   ...+..|..++..  +.|+||+++++.+...    +.
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~----~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGK----WRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEE----ETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             cceEEEeEeecCCCeEEEEEE----ECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            457777889999999998864    568999999997543   2334455555554  4999999999998876    67


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++|+|.++++..  .+++..+..++.|++.||+..++
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~  152 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHT  152 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999764  48899999999999999987664

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=5e-13  Score=101.71  Aligned_cols=113  Identities=16%  Similarity=0.088  Sum_probs=87.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC-----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-----  136 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.+....  ......+.+|+.+++.++||||+++++++...+     
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             SSEEEEEEC------CEEEEE--ETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ceEEEeEEeeecCCeEEEEEE--ECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            456777889999999999876  55678999999996532  233556889999999999999999999987653     


Q ss_pred             -cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 -HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 -~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ..|++|||+ +++|.+++...  .+++.....++.||++||+..+
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH  145 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH  145 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence             469999999 78999999763  4889999999999999998543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.41  E-value=5.1e-13  Score=101.19  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=94.2

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----------hhhHHHHHHHHHHHcCCCcchhhhhe
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----------DLTRPLLLELKRLKDLHHDHLVKFIG  130 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----------~~~~~~~~e~~~l~~l~h~ni~~l~~  130 (184)
                      ..+.|.+.+.++.|++|.+|.+.   ...|..||+|.+.....           ...+.+.+|+.++..++||||+++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGV---DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEE---CTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             hccceEEeEEeccCCCEEEEEEE---CCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            34567788899999999999875   24588999999965322           11367889999999999999999999


Q ss_pred             eeec-----CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         131 ACLD-----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       131 ~~~~-----~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+..     ....+++|||+. |++.+++......+++..+..++.||+.||+.++
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  151 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH  151 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            8843     346899999998 5899988876667899999999999999998543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.41  E-value=3e-13  Score=103.20  Aligned_cols=115  Identities=11%  Similarity=0.038  Sum_probs=86.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHH---HHHHcCCCcchhhhh-------e
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLEL---KRLKDLHHDHLVKFI-------G  130 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~---~~l~~l~h~ni~~l~-------~  130 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   ...+.+.+|+   ..++.+.||||++++       +
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEAT--DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEE--C-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             ceEEEcceeecCCCEEEEEEE--ECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            456777889999999999876  456789999999985422   3356788999   556666899999998       4


Q ss_pred             eeecCC-----------------cEEEEEeecCCCCHHHHHhhcCC------CCCHHHHHHHHHHHHHHhhhcc
Q psy8884         131 ACLDPP-----------------HCCLLTEYCPKGSLQDILENEQF------KLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       131 ~~~~~~-----------------~~~lv~e~~~~gsl~~~l~~~~~------~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+.+++                 ..|++|||+ +|+|.+++.....      .+++..+..++.||++||+.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  223 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH  223 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            444332                 388999999 5899999986431      2235788889999999998543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.41  E-value=5.1e-13  Score=99.90  Aligned_cols=116  Identities=19%  Similarity=0.182  Sum_probs=94.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Ccchhhhheeee--------c
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACL--------D  134 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~--------~  134 (184)
                      ..|.+.+.++.|++|.+|.+.  ...+|+.||+|.+..........+.+|+..+..+. ||||+++++.+.        .
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQ--DVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEE--ETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             ceEEEEEEEccCCceEEEEEE--ECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            356777889999999999876  44578899999997665555667889999999996 999999999884        3


Q ss_pred             CCcEEEEEeecCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 PPHCCLLTEYCPKGSLQDILEN--EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~--~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ....++++||+. |+|.+++..  ....+++..+..++.||+.||+.+++
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~  154 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR  154 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            345899999997 699998865  33468999999999999999987654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.41  E-value=9.5e-13  Score=98.40  Aligned_cols=110  Identities=13%  Similarity=0.068  Sum_probs=93.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Ccchhhhheeeec--CCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLD--PPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~--~~~~~  139 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+++.||+|.++...   ...+.+|+.++..+. |+||+++++.+..  ....+
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAI--NITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             CCceEEEEEecccCCeEEEEEE--ECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            4567788889999999999876  55678999999998644   456889999999997 9999999999987  56789


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|||+++++|.+++..    +++.....++.|++.||+.++
T Consensus       110 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH  147 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH  147 (330)
T ss_dssp             EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998853    788899999999999998543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.41  E-value=9.4e-13  Score=107.21  Aligned_cols=119  Identities=18%  Similarity=0.153  Sum_probs=96.0

Q ss_pred             Cccccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+.+.+.++.|++|.||.+.+.. ...+..||+|.++.... ...+.+.+|+.+++.++||||+++++++. .+..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            34556777889999999999875221 12345799999876432 33567899999999999999999999885 46689


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||+++|+|.+++......+++..+..++.|++.||+.++
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  508 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE  508 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876667899999999999999998543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.40  E-value=1e-12  Score=96.47  Aligned_cols=119  Identities=20%  Similarity=0.140  Sum_probs=87.8

Q ss_pred             Cccccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.|.+.+.++.|++|.+|.+.+... ..+..||+|.++....   ...+.+.+|+.++..++||||+++++.+..++ 
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence            345677778899999999998752110 1123689999986532   33567889999999999999999999987654 


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+++|+|.+++......+++.....++.|+++||+..+
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  138 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE  138 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999876557899999999999999998544

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.40  E-value=7.5e-13  Score=97.84  Aligned_cols=111  Identities=10%  Similarity=0.025  Sum_probs=90.0

Q ss_pred             cccccc-hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHH-HcCCCcchhhhheeeec----CCc
Q psy8884          64 EPMFKN-SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRL-KDLHHDHLVKFIGACLD----PPH  137 (184)
Q Consensus        64 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l-~~l~h~ni~~l~~~~~~----~~~  137 (184)
                      +.+... +.++.|++|.+|.+.  ...+++.||+|.++..     ..+.+|+..+ +...||||+++++.+..    ...
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIF--NKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEE--EcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            334444 678899999999876  4567889999999753     3456788777 66799999999998876    567


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++|+|.+++.... ..+++..+..++.|++.||+..+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  134 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999998653 36899999999999999998544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.39  E-value=5.2e-13  Score=102.76  Aligned_cols=111  Identities=10%  Similarity=0.025  Sum_probs=87.9

Q ss_pred             cccccc-hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHH-HcCCCcchhhhheeeec----CCc
Q psy8884          64 EPMFKN-SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRL-KDLHHDHLVKFIGACLD----PPH  137 (184)
Q Consensus        64 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l-~~l~h~ni~~l~~~~~~----~~~  137 (184)
                      +.+... +.++.|++|.||.+.  ...+|+.||+|.++..     ..+.+|+.++ +..+|+||+++++.+..    .+.
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~--~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIF--NKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeccceeeeccCeEEEEEE--ECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            334443 578899999999876  5567889999999743     3456787776 45689999999998764    567


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+||||+++|+|.+++.... ..+++..+..++.||+.||+.++
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999998643 35899999999999999998544

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.39  E-value=7e-13  Score=98.02  Aligned_cols=115  Identities=14%  Similarity=0.165  Sum_probs=91.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCCcchhhhheeee--cCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACL--DPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h~ni~~l~~~~~--~~~~  137 (184)
                      +.|.+.+.++.|++|.+|.+.  ...++..+|+|.++....    .....+.+|+.+++.++|+||+++++.+.  ..+.
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEE--BTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cceeEeeEEecCCCeEEEEEE--ECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            456777889999999999876  445788999999986532    23466889999999999999999999884  4568


Q ss_pred             EEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+++| +.+++... ...+++.....++.|+++||+..+
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            89999999987 77777643 346889999999999999998543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.39  E-value=9.3e-13  Score=98.70  Aligned_cols=115  Identities=17%  Similarity=0.129  Sum_probs=89.4

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHH--HHcCCCcchhhhheeeec--
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKR--LKDLHHDHLVKFIGACLD--  134 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~--l~~l~h~ni~~l~~~~~~--  134 (184)
                      ....++.|.+.+.++.|++|.||.+    ..+++.||+|.++....   ..+..|..+  +..+.|+||+++++.+..  
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~----~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKG----SLDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEE----EETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             CCcChHHhheeeecccCCCeEEEEE----EECCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccc
Confidence            3456778888899999999999986    46889999999986542   334444444  456899999999875432  


Q ss_pred             ---CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 ---PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ---~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                         ....++||||+++|+|.+++....  .++.....++.||++||+..++
T Consensus        81 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~  129 (336)
T 3g2f_A           81 ADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHT  129 (336)
T ss_dssp             TTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHh
Confidence               335789999999999999997654  4888899999999999997664

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.39  E-value=1.3e-12  Score=100.03  Aligned_cols=113  Identities=14%  Similarity=0.119  Sum_probs=85.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCC-CcchhhhheeeecCC--cE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPP--HC  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~--~~  138 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.||+|.+....  ......+.+|+.++..+. |+||+++++++...+  .+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSI--DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             TTEEEEEC-------CEEEEE--ETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             CceEEEEEeeeCCCeEEEEEE--ECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            456777889999999999876  55678999999986532  233556789999999997 999999999987543  78


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+||||++ |+|..++...  .+++.....++.|++.||+..+
T Consensus        87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH  126 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH  126 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999998 5899999764  5789999999999999998544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.38  E-value=3.2e-13  Score=110.44  Aligned_cols=113  Identities=15%  Similarity=0.024  Sum_probs=90.7

Q ss_pred             cccccchhhhhhcccceeeecceeee-cCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLK-EGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH----  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~----  137 (184)
                      +.|.+...++.|++|.||.+.  ... +|+.||+|.+..... .....+.+|+.++..++||||+++++++...+.    
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~--~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLAL--DRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--EGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEE--EcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            567788889999999999875  322 578999999875432 335568899999999999999999999887654    


Q ss_pred             -EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 -CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 -~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       .|+||||+++|+|.+++..   .+++.++..++.||++||+..+
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH  199 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH  199 (681)
T ss_dssp             EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH
Confidence             7999999999999988754   5899999999999999998543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.37  E-value=2.6e-13  Score=110.01  Aligned_cols=118  Identities=18%  Similarity=0.082  Sum_probs=94.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc-hhhhHHHHHHHHHHHcCCCcchhhhheeeec------
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLD------  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~------  134 (184)
                      ..+.|.+.+.++.|++|.+|.+.  ...+|..||+|.++... ......+.+|+.++..++||||+++++++..      
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~--~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWI--HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCC--CTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEE--ECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            34567788899999999999876  45678999999997642 2335678899999999999999999888655      


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ--FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~--~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+..+++|||+++|+|.+++....  ..+++..+..++.|++.||+..+
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH  138 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH  138 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            677899999999999999998643  25788889999999999998543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.37  E-value=7.9e-13  Score=98.98  Aligned_cols=110  Identities=15%  Similarity=0.032  Sum_probs=92.2

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEeecC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYCP  146 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~~~  146 (184)
                      +.++.|++|.+|.+.  ...+|+.||+|.++....  .....+.+|+.++..+. ||||+++++.+...+..+++|||++
T Consensus        35 ~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~  112 (327)
T 3lm5_A           35 KELGRGKFAVVRQCI--SKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAA  112 (327)
T ss_dssp             EEEEEETTEEEEEEE--ETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             ceeCCCCCeEEEEEE--ECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecC
Confidence            678889999999876  455689999999986543  23567889999999984 6999999999999999999999999


Q ss_pred             CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         147 KGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       147 ~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|+|.+++... ...+++..+..++.|++.||+.++
T Consensus       113 ~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH  148 (327)
T 3lm5_A          113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH  148 (327)
T ss_dssp             TEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999998643 346899999999999999998543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.37  E-value=1.7e-12  Score=98.54  Aligned_cols=113  Identities=12%  Similarity=0.044  Sum_probs=93.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----Cc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~  137 (184)
                      +.|...+.++.|++|.||.+.  ...++..||+|.++.... .....+.+|+.++..++||||+++++.+...     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEE--ECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            457788889999999999876  556788999999985433 3346788999999999999999999988654     46


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+.+ +|.+++...  .+++..+..++.|++.||+.++
T Consensus       105 ~~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH  145 (364)
T 3qyz_A          105 VYIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH  145 (364)
T ss_dssp             EEEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            8999999984 899999764  4889999999999999998543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.37  E-value=1.5e-12  Score=98.14  Aligned_cols=113  Identities=15%  Similarity=0.111  Sum_probs=92.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----Cc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----PH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~~  137 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.... .....+.+|+.+++.++||||+++++.+...     ..
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSAT--HKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cceEEeeEEcCCCCeEEEEEE--ECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            456777889999999999876  445688999999975433 3355678999999999999999999887653     67


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++++||+. |+|.+++...  .+++..+..++.|++.||+..+
T Consensus        89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH  129 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH  129 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            899999998 5899998763  5889999999999999998544

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.36  E-value=2e-12  Score=97.46  Aligned_cols=113  Identities=12%  Similarity=0.073  Sum_probs=94.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCC--cchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHH--DHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h--~ni~~l~~~~~~~~~~~  139 (184)
                      ..|.+.+.++.|++|.||.+.   ...+..||+|.++....  .....+.+|+.++..+.|  +||+++++++...+..+
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVL---NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEE---CTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEE---eCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            456777889999999999875   24578999999976433  334678899999999976  99999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++|| +.+|+|.+++.... .+++..+..++.||++||+..+
T Consensus        86 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH  125 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH  125 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999 57789999998754 6889999999999999998544

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.36  E-value=1e-12  Score=99.30  Aligned_cols=112  Identities=13%  Similarity=-0.052  Sum_probs=88.2

Q ss_pred             cccccchhhhhhcccceeeecceeee------cCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhh---------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLK------EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKF---------  128 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l---------  128 (184)
                      +.|.+.+.++.|++|.+|.+......      .++.||+|.++..     ..+.+|+.++..++|||++++         
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            56778888999999999988622111      4789999999754     357899999999999999984         


Q ss_pred             ------heeeec-CCcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         129 ------IGACLD-PPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       129 ------~~~~~~-~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                            ++++.. .+..+++|||+ +|+|.+++... ...+++..+..++.||+.||+..+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  176 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH  176 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                  445444 67889999999 99999999865 346899999999999999998543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.36  E-value=1.6e-12  Score=101.86  Aligned_cols=113  Identities=13%  Similarity=0.057  Sum_probs=91.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC-----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----  135 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----  135 (184)
                      .+.|...+.++.|++|.||.+.  ...+|+.||+|.+....  ......+.+|+.+++.++||||+++++.+...     
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEE--ETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             cCCeEEEEEeecCCCeEEEEEE--ECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            3557777889999999999876  55678999999997642  23356688999999999999999999998654     


Q ss_pred             -CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 -PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 -~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       ..+|+||||++++ +.+.+..   .+++..+..++.||+.||+..+
T Consensus       139 ~~~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~lH  181 (464)
T 3ttj_A          139 FQDVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLH  181 (464)
T ss_dssp             CCEEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHHH
Confidence             3579999999875 6666643   4789999999999999998544

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.36  E-value=3.2e-12  Score=94.92  Aligned_cols=119  Identities=12%  Similarity=0.032  Sum_probs=86.6

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-h-hHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-L-TRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~-~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      ..++.|...+.++.|++|.+|.+.  ...+|+.||+|.++..... . ...+..+..+++.+.||||+++++++...+..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~   99 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMR--FRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV   99 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEE--ETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhhccccccceeeecCCeeEEEEE--EecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence            355677777889999999999876  4446889999999865432 2 22344455568888999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|||+ ++.+..+.......+++.....++.|+++||+..++
T Consensus       100 ~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  142 (318)
T 2dyl_A          100 FIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE  142 (318)
T ss_dssp             EEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999 455555555445578999999999999999986653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.36  E-value=1.2e-12  Score=98.77  Aligned_cols=115  Identities=11%  Similarity=-0.095  Sum_probs=88.0

Q ss_pred             ccccccchhhhhhcccceeeecceeee---cCcEEEEeEeeccchh-----------hhHHHHHHHHHHHcCCCcchhhh
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLK---EGNKVAIKNLKKSRID-----------LTRPLLLELKRLKDLHHDHLVKF  128 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~vavK~l~~~~~~-----------~~~~~~~e~~~l~~l~h~ni~~l  128 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...   .+..+|+|.+......           ....+.+|+..+..+.|+||+++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAF--PTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             SCEEEEEEEC------CEEEEE--ESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             CceEEEEeeEeecCCeEEEEEE--ecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            3567788899999999999876  322   6779999999764321           12346678889999999999999


Q ss_pred             heeeec----CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         129 IGACLD----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       129 ~~~~~~----~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++.+..    .+..+++|||+ +|+|.+++...+ .+++..+..++.||+.||+.++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH  168 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH  168 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999877    67899999999 999999998655 6899999999999999998543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.35  E-value=1.4e-12  Score=99.33  Aligned_cols=113  Identities=19%  Similarity=0.140  Sum_probs=85.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecC------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDP------  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------  135 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.+....  ......+.+|+.+++.++||||+++++.+...      
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             TTEEEEEECC----CCEEEEE--ETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CceEEeeEEeecCCeEEEEEE--ECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            456777889999999999876  55678999999997532  23356688999999999999999999988654      


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ...++++|++ +++|.+++...  .+++..+..++.||++||+..+
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH  149 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH  149 (367)
T ss_dssp             CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            5689999998 67999988753  5889999999999999998543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.35  E-value=2.2e-12  Score=103.42  Aligned_cols=91  Identities=13%  Similarity=0.011  Sum_probs=76.0

Q ss_pred             eeecCcEEEEeEeeccch----------hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeecCCCCHHHHHh
Q psy8884          87 LLKEGNKVAIKNLKKSRI----------DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE  155 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~~----------~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~  155 (184)
                      ..|.|+.+++|.+.....          ...++|.+|+.+|+++ .|+||+++++++.+.+..||||||++||+|.++|.
T Consensus       255 r~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~  334 (569)
T 4azs_A          255 RYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA  334 (569)
T ss_dssp             EEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH
T ss_pred             cccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH
Confidence            567899999999975421          1245689999999999 69999999999999999999999999999999998


Q ss_pred             hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         156 NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       156 ~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+ .++..   .|+.||++||+..|
T Consensus       335 ~~~-~l~~~---~I~~QIl~AL~ylH  356 (569)
T 4azs_A          335 AGE-EIDRE---KILGSLLRSLAALE  356 (569)
T ss_dssp             TTC-CCCHH---HHHHHHHHHHHHHH
T ss_pred             hCC-CCCHH---HHHHHHHHHHHHHH
Confidence            755 45654   48899999998443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.35  E-value=2.3e-12  Score=98.51  Aligned_cols=111  Identities=13%  Similarity=0.058  Sum_probs=88.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec---------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD---------  134 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~---------  134 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.+......    ..+|+.+++.++|+||+++++++..         
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~--~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVF--DIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEE--ETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             ceEEEEEEEEeccCEEEEEEE--ECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            457777889999999999876  5567899999999754322    2479999999999999999998743         


Q ss_pred             -----------------------------CCcEEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 -----------------------------PPHCCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 -----------------------------~~~~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                                                   ....++||||++ |+|.+.+..   ....+++..+..++.||++||+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                         234889999999 488877763   3456899999999999999998544

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.35  E-value=5.9e-13  Score=103.45  Aligned_cols=110  Identities=13%  Similarity=0.161  Sum_probs=89.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      .|...+.++.|++|.|+..   +..+|+.||+|.+.....   ..+.+|+.+++.+ +||||+++++.+.+.+..|++||
T Consensus        25 ~y~~~~~LG~G~~G~V~~~---~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYR---GMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEE---EESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCeeecCcCEEEEEE---EEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            4666688999999986643   567899999999976442   2356899999998 79999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+. |+|.+++........+.....++.||++||+.++
T Consensus        99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  135 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH  135 (432)
T ss_dssp             CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH
Confidence            997 5999999876545555566789999999998443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.35  E-value=1.5e-12  Score=98.89  Aligned_cols=118  Identities=11%  Similarity=-0.051  Sum_probs=91.5

Q ss_pred             ccccccchhhhhhcccceeeecce---eeecCcEEEEeEeeccchh-----------hhHHHHHHHHHHHcCCCcchhhh
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKE---LLKEGNKVAIKNLKKSRID-----------LTRPLLLELKRLKDLHHDHLVKF  128 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~vavK~l~~~~~~-----------~~~~~~~e~~~l~~l~h~ni~~l  128 (184)
                      ...|.+.+.++.|++|.||.+...   ....++.||+|.+......           .......|+..+..+.|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            346778889999999999998632   1224689999998765421           11234456667788899999999


Q ss_pred             heeeecC----CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         129 IGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       129 ~~~~~~~----~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++++...    ...+++|||+ +|+|.+++......+++..+..++.||+.||+.++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH  169 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH  169 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9988764    4589999999 99999999876667999999999999999998544

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.34  E-value=2.9e-12  Score=98.28  Aligned_cols=113  Identities=12%  Similarity=0.069  Sum_probs=93.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCC--CcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLH--HDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~--h~ni~~l~~~~~~~~~~~  139 (184)
                      ..|.+.+.++.|++|.||.+.  . ..++.||+|.++....  .....+.+|+.++..+.  |+||+++++++...+..+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~--~-~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~  132 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVL--N-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  132 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEE--C-TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             CceEEEEEEccCCCeEEEEEE--c-CCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence            347777889999999999875  2 2488999999976432  33567889999999996  599999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||| +.+|+|.+++.... .+++..+..++.||+.||+..+
T Consensus       133 lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH  172 (390)
T 2zmd_A          133 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH  172 (390)
T ss_dssp             EEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999 67889999998755 6788889999999999998544

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.34  E-value=2.9e-12  Score=94.97  Aligned_cols=115  Identities=17%  Similarity=0.116  Sum_probs=90.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-----hhhHHHHHHHHHHHcC---CCcchhhhheeeecC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDL---HHDHLVKFIGACLDP  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l---~h~ni~~l~~~~~~~  135 (184)
                      +.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....     .....+.+|+.+++.+   .||||+++++.+...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEE--CTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEE--ECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            456777889999999999876  556789999999975432     1234566777777665   599999999998765


Q ss_pred             C-----cEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 P-----HCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~-----~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .     ..+++|||+. |+|.+++.... ..+++..+..++.|++.||+.++
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH  137 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH  137 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4     4799999998 59999998653 34899999999999999998543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.34  E-value=4.2e-13  Score=99.62  Aligned_cols=116  Identities=15%  Similarity=0.054  Sum_probs=88.6

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcC----CCcchhhhheee
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDL----HHDHLVKFIGAC  132 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l----~h~ni~~l~~~~  132 (184)
                      .+.|.+.+.++.|++|.+|.+.  ...+++.||+|.++.....      ....+.+|+..+..+    .|+||+++++.+
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGH--RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEE--CTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhceEEeeEEEcCCCEEEEEEE--EccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457778889999999999875  4457889999999765331      123355788888888    899999999999


Q ss_pred             ecCCcEEEEEee-cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         133 LDPPHCCLLTEY-CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       133 ~~~~~~~lv~e~-~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ...+..++++|+ +.+++|.+++.... .+++..+..++.||++||+..+
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  156 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH  156 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            988899999999 78999999998654 5899999999999999998543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.34  E-value=9e-13  Score=100.06  Aligned_cols=120  Identities=13%  Similarity=0.131  Sum_probs=96.5

Q ss_pred             cccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-----------Ccchhh
Q psy8884          59 EQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-----------HDHLVK  127 (184)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----------h~ni~~  127 (184)
                      ..+....|.+.+.++.|++|.||.+.  ...+++.||+|.++.... ....+.+|+.++..+.           |+||++
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           14 EPYKDARYILVRKLGWGHFSTVWLAK--DMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             CEETTTTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             CcccCCeEEEEEeeeecCCeEEEEEE--ecCCCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            34455678888999999999999876  556789999999986432 2456778888888775           889999


Q ss_pred             hheeeecCC----cEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         128 FIGACLDPP----HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       128 l~~~~~~~~----~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++.+...+    ..++++|++ +|+|.+++... ...+++..+..++.||+.||+.+++
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~  149 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR  149 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            999887543    789999999 88999999863 3458899999999999999986654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.34  E-value=3.3e-12  Score=97.25  Aligned_cols=113  Identities=12%  Similarity=0.047  Sum_probs=92.0

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccc--hhhhHHHHHHHHHHHcCCCcchhhhheeeecCC----
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSR--IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----  136 (184)
                      .+.|...+.++.|++|.||.+.  ...+++.||+|.++...  ......+.+|+.+++.++||||+++++.+...+    
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred             hhheeEeeeeEecCCEEEEEEE--ECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence            3457777889999999999876  45678899999997542  233456889999999999999999999987654    


Q ss_pred             --cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 --HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 --~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                        ..++||||+++ ++.+.+..   .+++.....++.||+.||+..+
T Consensus       102 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH  144 (371)
T 2xrw_A          102 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH  144 (371)
T ss_dssp             CCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH
Confidence              68999999985 78888853   4789999999999999998543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.33  E-value=4.8e-12  Score=94.55  Aligned_cols=118  Identities=13%  Similarity=0.095  Sum_probs=92.7

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHH-HHHcCCCcchhhhheeeecCCcE
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELK-RLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~-~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      +..+.+...+.++.|++|.+|.+.  ...+|+.||+|.++.... .....+..|.. +++.+.||||+++++++...+..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~   96 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMV--HKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDC   96 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEE--ETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEE--EcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCce
Confidence            455667777889999999999876  445688999999986532 22344555655 67778999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILEN----EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~----~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++ ++.+++..    ....+++.....++.|++.||...+
T Consensus        97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  142 (327)
T 3aln_A           97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK  142 (327)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh
Confidence            999999996 78887763    2446889999999999999998554

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.33  E-value=4.3e-12  Score=93.33  Aligned_cols=113  Identities=18%  Similarity=0.022  Sum_probs=92.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheee-ecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGAC-LDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~-~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+|+.||+|.+.....  ...+.+|+.++..+.|++++..+..+ ...+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGT--DIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--ETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEE--EcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            456777889999999999876  556789999999876432  34588999999999998877766655 4567789999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+ +|+|.+++......+++..+..++.|++.||+.++
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  122 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH  122 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            999 89999999865567899999999999999998543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.32  E-value=2e-12  Score=98.87  Aligned_cols=115  Identities=14%  Similarity=0.073  Sum_probs=91.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC--------Ccchhhhheeee--
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH--------HDHLVKFIGACL--  133 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~--------h~ni~~l~~~~~--  133 (184)
                      +.|.+.+.++.|++|.||.+.  ...+++.||+|.++... ...+.+.+|+.++..+.        |+||+++++.+.  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSW--DIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEE--ecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            457777889999999999876  55678899999998643 23456788999988875        788999999887  


Q ss_pred             --cCCcEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 --DPPHCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 --~~~~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                        .....++||||+ +|++.+.+... ...+++..+..++.||+.||+..++
T Consensus       114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~  164 (397)
T 1wak_A          114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT  164 (397)
T ss_dssp             ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              556889999999 55666666543 3568999999999999999987653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.32  E-value=3.8e-12  Score=96.91  Aligned_cols=112  Identities=15%  Similarity=0.117  Sum_probs=92.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE---
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC---  138 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~---  138 (184)
                      +.|...+.++.|++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..   
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAI--DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccEEEEeEEecCCCeEEEEEE--ECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            456777889999999999876  556789999999976432  2356788999999999999999999999876654   


Q ss_pred             ---EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 ---CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ---~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                         +++|||+. |+|.+++..   .+++..+..++.|++.||+.++
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH  161 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH  161 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH
Confidence               99999998 588887743   4889999999999999998543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.31  E-value=5.3e-12  Score=92.78  Aligned_cols=113  Identities=18%  Similarity=0.022  Sum_probs=90.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheee-ecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGAC-LDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~-~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.+|.+.  ...+++.||+|.+.....  ...+.+|+.++..+.|++++..+..+ ...+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGT--DIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEE--ETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEE--EcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            346777889999999999876  556788999998765432  33578899999999998877766655 5567889999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+ +|+|.+++......+++..+..++.|++.||+..+
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  122 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH  122 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999 89999999866567899999999999999998544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.30  E-value=3.2e-12  Score=98.40  Aligned_cols=109  Identities=17%  Similarity=0.161  Sum_probs=82.0

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeee--cCCcEEEEEeecCC
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL--DPPHCCLLTEYCPK  147 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~--~~~~~~lv~e~~~~  147 (184)
                      ..++.|++|.||.+.......+..||+|.++....  ...+.+|+.+++.++||||+++++.+.  .....+++|||+.+
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            46889999999987633334678999999976532  346789999999999999999999985  46789999999985


Q ss_pred             CCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         148 GSLQDILENE--------QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       148 gsl~~~l~~~--------~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       +|.+++...        ...+++..+..++.||+.||+.++
T Consensus       105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH  145 (405)
T 3rgf_A          105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH  145 (405)
T ss_dssp             -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence             788887632        124889999999999999998544

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.30  E-value=5.2e-12  Score=94.91  Aligned_cols=112  Identities=12%  Similarity=-0.012  Sum_probs=85.7

Q ss_pred             ccccc-chhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec----CCcE
Q psy8884          64 EPMFK-NSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHC  138 (184)
Q Consensus        64 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~~  138 (184)
                      +.|.+ .+.++.|++|.||.+.  ...+|+.||+|.+......    .......+..+.|+|++++++.+..    ....
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECF--HRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEE--ECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            34455 3568999999999876  4556899999999764221    1222234567799999999998875    4458


Q ss_pred             EEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|||+++|+|.+++.... ..+++.++..++.|+++||+.++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH  145 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH  145 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998653 46899999999999999998543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.30  E-value=3.4e-12  Score=96.44  Aligned_cols=112  Identities=16%  Similarity=0.123  Sum_probs=91.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH----  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~----  137 (184)
                      +.|.....++.|++|.+|.+.  ...+|+.||+|.+.....  .....+.+|+.+++.++||||+++++.+...+.    
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAI--DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             ceEEEeeeEecCCCeEEEEEE--ECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            456677889999999999876  556789999999975432  234568899999999999999999999887654    


Q ss_pred             --EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 --CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 --~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                        .+++|||+. |+|.+++..   .+++..+..++.||++||+.++
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH  143 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH  143 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence              499999998 588877643   4889999999999999998543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.29  E-value=6.5e-12  Score=93.91  Aligned_cols=114  Identities=12%  Similarity=0.028  Sum_probs=92.3

Q ss_pred             cccccchhhhhhcccceeeeccee-eecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcc------hhhhheeeecCC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKEL-LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDH------LVKFIGACLDPP  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n------i~~l~~~~~~~~  136 (184)
                      +.|.+.+.++.|++|.+|.+.  . ...++.||+|.++... ...+.+.+|+.++..+.|++      ++++++.+...+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECI--DHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--ETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             CceEEEEEEecCCCeEEEEEE--ecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            457777889999999999875  2 3467899999997643 22456778888888876665      889999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++|||+ +|+|.+++.... ..+++..+..++.|+++||+..+
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH  135 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH  135 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            999999999 889999997653 35789999999999999998544

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.28  E-value=1.2e-11  Score=95.95  Aligned_cols=114  Identities=11%  Similarity=0.023  Sum_probs=92.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC------CCcchhhhheeeecCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL------HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l------~h~ni~~l~~~~~~~~~  137 (184)
                      ..|.+.+.++.|++|.||.+.  ...+++.||+|.++.... ....+..|+.++..+      .|+||+++++.+...+.
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~--~~~~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEE--ETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             CcEEEEEEcccCccEEEEEEE--ECCCCcEEEEEEECCccc-hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            346777889999999999876  555688999999986532 234566777777665      67799999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+. |+|.+++.... ..+++..+..++.||+.||+.++
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH  217 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH  217 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999997 58999987653 45899999999999999998543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.27  E-value=7.1e-12  Score=93.42  Aligned_cols=115  Identities=14%  Similarity=0.101  Sum_probs=89.7

Q ss_pred             cccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch--hhhHHHHHHHHHHHcC---CCcchhhhheeee----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDL---HHDHLVKFIGACL----  133 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~ni~~l~~~~~----  133 (184)
                      +.|.+.+.++.|++|.+|.+.  .. ..|+.||+|.++....  .....+.+|+.+++.+   .||||+++++.+.    
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE--ETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             hceeeeeeecccccEEEEEEE--ecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            456777889999999999875  32 3578999999976432  1233566777776655   8999999999886    


Q ss_pred             -cCCcEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         134 -DPPHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       134 -~~~~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       .....++++||+. |+|.+++.... ..+++..+..++.|+++||+..+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH  137 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH  137 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence             4567899999998 69999997643 35899999999999999998543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.27  E-value=9.9e-12  Score=96.58  Aligned_cols=108  Identities=17%  Similarity=0.150  Sum_probs=83.3

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcC-CCcchhhhheeeecCCcEEEEEeec
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYC  145 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~~~lv~e~~  145 (184)
                      ...+.++.|++|.++..   +..+|+.||+|.+....   .+.+.+|+.++..+ +||||+++++.+.+.+..+++|||+
T Consensus        18 ~~~~~LG~G~~g~V~~~---~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQ---GSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             EEEEEEEECSTTCEEEE---EESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eccCeEeeCCCeEEEEE---EEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            34567889999988753   56789999999987643   34567899999876 8999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCC------CHHHHHHHHHHHHHHhhhcc
Q psy8884         146 PKGSLQDILENEQFKL------EPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       146 ~~gsl~~~l~~~~~~l------~~~~~~~i~~qi~~gl~~~~  181 (184)
                      . |+|.+++.......      ++.....++.||+.||+.++
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  132 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH  132 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence            6 69999998643211      22234679999999998544

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.26  E-value=1.2e-11  Score=91.90  Aligned_cols=114  Identities=11%  Similarity=0.066  Sum_probs=94.2

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCC--CcchhhhheeeecCCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLH--HDHLVKFIGACLDPPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~--h~ni~~l~~~~~~~~~~  138 (184)
                      -..|.+.+.++.|++|.+|.+..   ..++.||+|.++....  .....+.+|+.++..+.  |+|++++++.+...+..
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLN---EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEC---TTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEc---CCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            34577778899999999998752   3488999999975432  33567889999999997  59999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++|| +.+|+|.+++.... .+++..+..++.|+++||+.++
T Consensus       104 ~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH  144 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH  144 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999 67789999998754 6789999999999999998543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.26  E-value=4.7e-12  Score=94.51  Aligned_cols=116  Identities=16%  Similarity=0.110  Sum_probs=96.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCC--Ccchhhhheeee
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLH--HDHLVKFIGACL  133 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~--h~ni~~l~~~~~  133 (184)
                      -.+.|.+.+.++.|++|.+|.+.  ...+|+.||+|.++.....      ....+.+|+.++..+.  |+|++++++.+.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGI--RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEE--ETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             ccCceEEEEEEeeCCCeEEEEEE--ECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34567888899999999999876  4557889999999865431      2245668999999986  599999999999


Q ss_pred             cCCcEEEEEeecCC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         134 DPPHCCLLTEYCPK-GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       134 ~~~~~~lv~e~~~~-gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      .++..++++|++.+ ++|.+++.... .+++.....++.||++||+..
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L  165 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHC  165 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999986 89999998644 688999999999999999844

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.25  E-value=2.4e-11  Score=95.61  Aligned_cols=113  Identities=17%  Similarity=0.012  Sum_probs=91.0

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchh-hhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLV-KFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~-~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.++.|++|.||.+.  ....++.||+|.++....  ...+..|+.++..+.|++.+ .+..++...+..+++|
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~--~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGT--NIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEE--ETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEE--ECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            456777889999999999876  456789999998875432  33578899999999875544 4555556678889999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||+ +|+|.+++......+++..+..++.||+.||+.++
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH  120 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH  120 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999 89999999865567899999999999999998543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.24  E-value=2.2e-11  Score=92.00  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=80.7

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCc----
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH----  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~----  137 (184)
                      .++.|.+.+.++.|++|.||.+.  ...+|..||+|.+..... .......++..+..++||||+++++++...+.    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGK--EKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHTTEEEC----------CEEEE--ETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hccceEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            45678888999999999999876  445688999999865432 23456677888888999999999998865332    


Q ss_pred             ---EEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 ---CCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ---~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                         .+++|||+++ ++...+..   ....+++.....++.|++.||+..+
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence               7899999997 55554432   3446788999999999999998666

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.23  E-value=1e-11  Score=94.50  Aligned_cols=113  Identities=10%  Similarity=-0.103  Sum_probs=75.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHH---HHHHcCCCcchhhhhee-------
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLEL---KRLKDLHHDHLVKFIGA-------  131 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~---~~l~~l~h~ni~~l~~~-------  131 (184)
                      .|...+.++.|++|.||.+.  ...+|+.||+|.++....   ...+.+..|+   ..++. .|||+++++..       
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVR--DVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             eeeeeeeccCCCCEEEEEEE--ECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            46677889999999999876  456789999999987543   2344566774   45555 79998875532       


Q ss_pred             eecC-----------------CcEEEEEeecCCCCHHHHHhhcCCCCCHHHH------HHHHHHHHHHhhhcc
Q psy8884         132 CLDP-----------------PHCCLLTEYCPKGSLQDILENEQFKLEPMFK------NSLMNKAAFNRVLRI  181 (184)
Q Consensus       132 ~~~~-----------------~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~------~~i~~qi~~gl~~~~  181 (184)
                      +..+                 +..++||||++ |+|.+++...+..+++..+      ..++.||++||+.++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH  211 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ  211 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence            2221                 33799999999 8999999875444566666      788899999998543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.20  E-value=4.2e-11  Score=91.48  Aligned_cols=115  Identities=18%  Similarity=0.156  Sum_probs=92.5

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Cc-----chhhhheeeecCC
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HD-----HLVKFIGACLDPP  136 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~-----ni~~l~~~~~~~~  136 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+++.||+|.++... .....+..|+.++..+. |+     +++++.+.+...+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAY--DRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE--ETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeeEEEEEEEeecCCEEEEEEE--EcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            4567778889999999999876  45578899999998543 22455667888877764 44     4888889998899


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..++||||+.+ +|.+++.... ..+++.....++.|++.||+.++
T Consensus       130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH  174 (382)
T 2vx3_A          130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA  174 (382)
T ss_dssp             EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99999999974 9999998653 45899999999999999999765

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.19  E-value=1.8e-11  Score=94.74  Aligned_cols=112  Identities=15%  Similarity=0.132  Sum_probs=87.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecC------Cc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP------PH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~------~~  137 (184)
                      ..|...+.++.|++|.||.+.  ...+|+.||+|.+.....    ...+|+.+++.++|+||+++++++...      ..
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~--~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAK--LCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEE--ECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            346677889999999999876  445689999999875432    234799999999999999999887431      23


Q ss_pred             EEEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++|||+++ ++.+.+..   ....+++.....++.||++||+.+++
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  174 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS  174 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            6799999996 66666642   34568999999999999999996543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.19  E-value=3.2e-11  Score=90.73  Aligned_cols=115  Identities=12%  Similarity=0.009  Sum_probs=90.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecC-cEEEEeEeeccchhhhHHHHHHHHHHHcCCCcc------hhhhheeeecCC
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEG-NKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDH------LVKFIGACLDPP  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n------i~~l~~~~~~~~  136 (184)
                      +.|.+.+.++.|++|.+|.+.  ....+ ..||+|.++... .....+.+|+.++..+.|++      ++.+.+.+...+
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~--~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECL--DHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE--ETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ccEEEEEEeeccCCeEEEEEE--ecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            457777889999999999875  33344 689999998643 23456778999998887766      788888888889


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|||+ +|++.+++.... ..+++..+..++.||+.||+..++
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~  141 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE  141 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999 567777776543 468999999999999999985543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.07  E-value=2.4e-10  Score=87.65  Aligned_cols=111  Identities=14%  Similarity=0.072  Sum_probs=82.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC------c
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP------H  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~------~  137 (184)
                      ..|.....++.|++|.||.+.   ...+..+|+|.+......    ..+|+.+++.++||||+++++++...+      .
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~---~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAK---LVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEE---ETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEE---ECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            457777889999999999875   223456888888654321    237999999999999999999885433      3


Q ss_pred             EEEEEeecCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILE--NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~--~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .++||||++++.+.....  .....+++.....++.||++||+..+
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  158 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH  158 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            789999999754333322  22456889999999999999998544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.04  E-value=2.5e-10  Score=91.00  Aligned_cols=99  Identities=12%  Similarity=-0.087  Sum_probs=73.6

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccch--------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.++.|++|.+|.+    ...+..+++|.......        ...+.+.+|+.+++.++||||+++...+...+..|++
T Consensus       342 ~~LG~G~fg~Vy~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          342 HLIGKGAEADIKRD----SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ------CCEEEEEE----ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CEEeeCCCEEEEEE----EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            56788888888875    46788999998754322        1134578999999999999999666666677778999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++..         ...++.|+++||...+
T Consensus       418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH  448 (540)
T 3en9_A          418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH  448 (540)
T ss_dssp             EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH
Confidence            999999999999865         4578999999998443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.99  E-value=7.2e-11  Score=87.41  Aligned_cols=88  Identities=23%  Similarity=0.361  Sum_probs=64.7

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc------------cCccccccchhhhhhc
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ------------FKLEPMFKNSLMHDIV   76 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~------------~~~~~~~~~~~~~~~~   76 (184)
                      ..|.+ |+.++++++|+|||+++|+|.+++..+++||||++|+|.+.++...            ..+.+-....+.....
T Consensus        60 ~~f~~-E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia  138 (299)
T 4asz_A           60 KDFHR-EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA  138 (299)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence            34555 9999999999999999999999999999999999999999987532            2344444445566666


Q ss_pred             ccceeeecceeeecCcEEEEeEeeccch
Q psy8884          77 KFNGYLKTKELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        77 ~~~~~~~~~~~~~~g~~vavK~l~~~~~  104 (184)
                      .|..|++.       ..++++.+++.++
T Consensus       139 ~gl~yLH~-------~~iiHRDlKp~NI  159 (299)
T 4asz_A          139 AGMVYLAS-------QHFVHRDLATRNC  159 (299)
T ss_dssp             HHHHHHHH-------TTCCCSCCSGGGE
T ss_pred             HHHHHHHh-------CCcccCccCHhhE
Confidence            66767764       2344455554443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.95  E-value=1.3e-10  Score=87.13  Aligned_cols=75  Identities=24%  Similarity=0.298  Sum_probs=57.5

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc--------------Cccccccchhhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF--------------KLEPMFKNSLMHD   74 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~--------------~~~~~~~~~~~~~   74 (184)
                      ..|.+ |+.++++++|+|||+++|+|.+.+..+++||||++|+|.+.++....              .+.+-....+...
T Consensus        88 ~~f~~-E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  166 (329)
T 4aoj_A           88 QDFQR-EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ  166 (329)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHH
Confidence            34555 99999999999999999999999999999999999999999876432              1233333345555


Q ss_pred             hcccceeeec
Q psy8884          75 IVKFNGYLKT   84 (184)
Q Consensus        75 ~~~~~~~~~~   84 (184)
                      ...|..|++.
T Consensus       167 ia~gl~yLH~  176 (329)
T 4aoj_A          167 VAAGMVYLAG  176 (329)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            6666666654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.94  E-value=1.1e-10  Score=86.80  Aligned_cols=88  Identities=23%  Similarity=0.329  Sum_probs=64.6

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc---------------Cccccccchhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF---------------KLEPMFKNSLMH   73 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~---------------~~~~~~~~~~~~   73 (184)
                      ..|.+ |+.++.+++|+|||+++|+|.+.+..++|+|||++|+|.+++.....               .+++.....+..
T Consensus        74 ~~f~~-E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  152 (308)
T 4gt4_A           74 EEFRH-EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA  152 (308)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHH
Confidence            34555 99999999999999999999999999999999999999999865321               233333345566


Q ss_pred             hhcccceeeecceeeecCcEEEEeEeeccch
Q psy8884          74 DIVKFNGYLKTKELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        74 ~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~  104 (184)
                      ....|..|++.       ..++++.+++.++
T Consensus       153 qia~gl~yLH~-------~~iiHRDLK~~NI  176 (308)
T 4gt4_A          153 QIAAGMEYLSS-------HHVVHKDLATRNV  176 (308)
T ss_dssp             HHHHHHHHHHH-------TTCCCSCCSGGGE
T ss_pred             HHHHHHHHHHh-------CCCCCCCccccce
Confidence            66667777764       2345555555554

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.93  E-value=1.5e-10  Score=85.87  Aligned_cols=74  Identities=19%  Similarity=0.303  Sum_probs=59.8

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      ..|.+ |+.++++++|+|||+++|+|.++ ..++|||||++|+|.+.++.....+++.....+......|..|++.
T Consensus        77 ~~f~~-E~~il~~l~HpNIV~l~g~~~~~-~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~  150 (307)
T 3omv_A           77 QAFRN-EVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA  150 (307)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECSS-SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEEEEEECC-eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34555 99999999999999999999764 5889999999999999998765556666666667777777777765

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.87  E-value=2e-09  Score=79.00  Aligned_cols=98  Identities=11%  Similarity=-0.032  Sum_probs=72.2

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch------------------hhhHHHHHHHHHHHcCCCcchhhhh
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI------------------DLTRPLLLELKRLKDLHHDHLVKFI  129 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~e~~~l~~l~h~ni~~l~  129 (184)
                      +.+.++.|+.|.+|.+.  . .+|+.||+|.++....                  .....+.+|+.++..+.  | +++.
T Consensus        94 ~~~~iG~G~~g~Vy~~~--~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCY--S-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             EEEEEEECSSEEEEEEE--E-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             ecCEeccCCCceEEEEE--e-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            34778889999999876  3 5688999999975322                  12346889999999998  4 6666


Q ss_pred             eeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         130 GACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       130 ~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      +.+.. +..++||||+++|+|.+ +..       .....++.|+++||+..
T Consensus       168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~l  209 (282)
T 1zar_A          168 KVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKF  209 (282)
T ss_dssp             CEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHH
T ss_pred             eEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHH
Confidence            65543 55699999999999988 422       12346899999999844

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.70  E-value=3.1e-09  Score=79.74  Aligned_cols=73  Identities=19%  Similarity=0.212  Sum_probs=55.5

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      +...|+.++++++|+|||++++++.+.+..+++||||++|+|.+.+.... .++......++.....+..|+|.
T Consensus        96 ~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~  168 (336)
T 4g3f_A           96 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT  168 (336)
T ss_dssp             CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            33459999999999999999999999999999999999999999987643 23333333444455555555553

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.69  E-value=2.1e-09  Score=81.03  Aligned_cols=88  Identities=13%  Similarity=0.206  Sum_probs=61.1

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc-cCccccccchhhhhhcccceeeeccee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      +.+.+ |+.++++++|+|||++++++.+.+..+++||||++|+|.+.+.... ..++......++.....+..|++.   
T Consensus        68 ~~~~~-E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---  143 (350)
T 4b9d_A           68 EESRR-EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---  143 (350)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHH-HHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence            34444 9999999999999999999999999999999999999999987543 223332333344444444555553   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..++++.+|++++
T Consensus       144 ----~~IiHRDlKp~NI  156 (350)
T 4b9d_A          144 ----RKILHRDIKSQNI  156 (350)
T ss_dssp             ----TTCEETTCCGGGE
T ss_pred             ----CCeeeccCCHHHE
Confidence                2344555555443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.68  E-value=3.8e-09  Score=79.56  Aligned_cols=88  Identities=16%  Similarity=0.300  Sum_probs=66.4

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      .+.+.+ |+.++++++|+|||++++++.+.+..+++||||++|++.+.+.+..  +..-....+......+..|++.   
T Consensus       115 ~~~~~~-Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH~---  188 (346)
T 4fih_A          115 RELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHA---  188 (346)
T ss_dssp             GGGGHH-HHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHH-HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHH---
Confidence            344444 9999999999999999999999999999999999999999887653  3333333445555555556654   


Q ss_pred             eecCcEEEEeEeeccchh
Q psy8884          88 LKEGNKVAIKNLKKSRID  105 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~~  105 (184)
                          ..++++.+|++++.
T Consensus       189 ----~~IiHRDlKp~NIL  202 (346)
T 4fih_A          189 ----QGVIHRDIKSDSIL  202 (346)
T ss_dssp             ----TTEECCCCSGGGEE
T ss_pred             ----CCcccccCCHHHEE
Confidence                44777788877763

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.65  E-value=5.3e-09  Score=80.74  Aligned_cols=88  Identities=16%  Similarity=0.300  Sum_probs=66.5

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      .+.+.+ |+.+|.+++|+|||++++++.+.+..+++||||++|+|.+.+....  +..-....+......+..|+|.   
T Consensus       192 ~~~~~~-Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH~---  265 (423)
T 4fie_A          192 RELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHA---  265 (423)
T ss_dssp             GGGHHH-HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHH-HHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHH---
Confidence            344444 9999999999999999999999999999999999999999887654  3333344455555555666654   


Q ss_pred             eecCcEEEEeEeeccchh
Q psy8884          88 LKEGNKVAIKNLKKSRID  105 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~~  105 (184)
                          ..++++.+|++++.
T Consensus       266 ----~~IiHRDiKp~NIL  279 (423)
T 4fie_A          266 ----QGVIHRDIKSDSIL  279 (423)
T ss_dssp             ----TTEECCCCSTTTEE
T ss_pred             ----CCeecccCCHHHEE
Confidence                44777778877763

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.64  E-value=2e-09  Score=79.25  Aligned_cols=89  Identities=24%  Similarity=0.265  Sum_probs=63.6

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTK   85 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
                      .|.+ |+.++++++|+|||+++++|.+    ....+++||||++|+|.+.+.+.. .++.-....+......+..|+|. 
T Consensus        71 ~~~~-E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~-  147 (290)
T 3fpq_A           71 RFKE-EAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT-  147 (290)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHH-HHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH-
Confidence            3555 9999999999999999999854    244789999999999999987643 23333333445555555666653 


Q ss_pred             eeeecCcEEEEeEeeccchh
Q psy8884          86 ELLKEGNKVAIKNLKKSRID  105 (184)
Q Consensus        86 ~~~~~g~~vavK~l~~~~~~  105 (184)
                          .|..++++.+|+.++.
T Consensus       148 ----~~~~IiHRDlKp~NIL  163 (290)
T 3fpq_A          148 ----RTPPIIHRDLKCDNIF  163 (290)
T ss_dssp             ----SSSCCCCCCCCGGGEE
T ss_pred             ----CCCCEEecccChhhee
Confidence                3345778888887763

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.57  E-value=1.1e-08  Score=75.99  Aligned_cols=85  Identities=19%  Similarity=0.227  Sum_probs=62.7

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecC
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEG   91 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   91 (184)
                      ...|+.+++++.|+||+++++++.+....+++||||++|+|.+.+.... .++......++.....+..|+|.       
T Consensus        79 ~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~-------  150 (311)
T 4aw0_A           79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG-------  150 (311)
T ss_dssp             HHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-------
Confidence            3459999999999999999999999999999999999999999987643 23333333344444444555553       


Q ss_pred             cEEEEeEeeccch
Q psy8884          92 NKVAIKNLKKSRI  104 (184)
Q Consensus        92 ~~vavK~l~~~~~  104 (184)
                      ..++++.+|++++
T Consensus       151 ~~IiHRDlKPeNI  163 (311)
T 4aw0_A          151 KGIIHRDLKPENI  163 (311)
T ss_dssp             TTEECSCCSGGGE
T ss_pred             CCCccCCCCHHHe
Confidence            4467777777665

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.53  E-value=9.6e-08  Score=73.68  Aligned_cols=115  Identities=12%  Similarity=0.001  Sum_probs=78.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCC-cchhhhhee--------
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHH-DHLVKFIGA--------  131 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h-~ni~~l~~~--------  131 (184)
                      ..+...+.++.|++|.||.+.  ...+|+.||+|+++....   ...+.+.+|+.++..+.| +|.......        
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~--~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEAT--DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             eeEEEecccccCCCEEEEEEE--ecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            346677889999999999986  556689999999984332   235678899999999977 332211111        


Q ss_pred             -------------eec-----CCcEEEEEeecCCCCHHHHHh------hcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         132 -------------CLD-----PPHCCLLTEYCPKGSLQDILE------NEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       132 -------------~~~-----~~~~~lv~e~~~~gsl~~~l~------~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                                   +..     ....+++|++ .+|+|.+++.      .....+++..+..++.||++||+.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  228 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH  228 (413)
T ss_dssp             EEECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                         011     1235666665 4579999885      22345678889999999999998544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.52  E-value=1.5e-08  Score=75.13  Aligned_cols=90  Identities=21%  Similarity=0.204  Sum_probs=60.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCC----ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecce-e
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKE-L   87 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   87 (184)
                      ..|+..+.+++|+|+++++|+|.+..    ..++|||||++|+|.+.+++...  .+-....+......|..|++... .
T Consensus        45 e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l--~~~~~~~i~~~ia~gl~ylH~~~~~  122 (303)
T 3hmm_A           45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV--TVEGMIKLALSTASGLAHLHMEIVG  122 (303)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCB--CHHHHHHHHHHHHHHHHHHHCCBCS
T ss_pred             HHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            44777788999999999999998653    46899999999999999987543  23233344445555666665310 0


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                      ......++++.+++.++
T Consensus       123 ~~~~~~IiHRDlKp~NI  139 (303)
T 3hmm_A          123 TQGKPAIAHRDLKSKNI  139 (303)
T ss_dssp             TTCBCCEECSCCCGGGE
T ss_pred             ccCCCCEeeccCCcccE
Confidence            01123566777776665

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=98.51  E-value=5.1e-09  Score=77.58  Aligned_cols=71  Identities=15%  Similarity=0.108  Sum_probs=50.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      ..|+.++.+++|+||+++.+++.+.+..+++||||++|+|.+.+.... .+.......+......+..|+|.
T Consensus        74 ~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~  144 (304)
T 3ubd_A           74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS  144 (304)
T ss_dssp             ----CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            349999999999999999999999999999999999999999987643 23333333344444444445543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.48  E-value=1.8e-08  Score=76.24  Aligned_cols=48  Identities=25%  Similarity=0.557  Sum_probs=41.1

Q ss_pred             chhhhhhhhhhcCC-CCcceeeccccCC-CceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHH-DHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h-~n~~~~~g~~~~~-~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ |+.++.++.| +|||+++|+|.+. ...++++|||++|+|.+.++..
T Consensus       114 ~~~-E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          114 LMS-ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             HHH-HHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             HHH-HHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            444 8999999976 7999999999775 4689999999999999999753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.37  E-value=6.7e-08  Score=69.89  Aligned_cols=105  Identities=12%  Similarity=0.073  Sum_probs=70.2

Q ss_pred             ccchhhhhhcccceeeecceeeecCcE--EEEeEeeccchh------------------------hhHHHHHHHHHHHcC
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNK--VAIKNLKKSRID------------------------LTRPLLLELKRLKDL  120 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~--vavK~l~~~~~~------------------------~~~~~~~e~~~l~~l  120 (184)
                      .+...++.|+.|.||.+.  ....|+.  ||+|.++.....                        ....+.+|...+..+
T Consensus        50 ~i~~~ig~G~~g~Vy~a~--~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           50 AMGGVISTGKEANVFYAD--GVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEECSSEEEEEEE--EEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceEEEEEEE--EcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            455678889999999876  3357888  999997653211                        012577899999998


Q ss_pred             CCcch--hhhheeeecCCcEEEEEeecCC-C----CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         121 HHDHL--VKFIGACLDPPHCCLLTEYCPK-G----SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       121 ~h~ni--~~l~~~~~~~~~~~lv~e~~~~-g----sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|+++  ...+..    +..++||||+.+ |    +|.+....    .++.....++.|++.||+..+
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHH
Confidence            87764  222221    346899999942 4    66665432    223456788899999988655

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.32  E-value=6.1e-08  Score=70.81  Aligned_cols=83  Identities=18%  Similarity=0.316  Sum_probs=58.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.++++++|+||+++.+++.+.+..+++|||| .|++.+.+.... .++......+......+..|++.       .
T Consensus        61 ~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~-------~  131 (275)
T 3hyh_A           61 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR-------H  131 (275)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-------C
Confidence            34999999999999999999999999999999999 688988876543 33333333444445455555553       2


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.+|++++
T Consensus       132 ~IiHRDiKP~NI  143 (275)
T 3hyh_A          132 KIVHRDLKPENL  143 (275)
T ss_dssp             TCCCCCCCTTTE
T ss_pred             CcccccCChHHe
Confidence            355555555544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.30  E-value=1.8e-07  Score=75.06  Aligned_cols=85  Identities=20%  Similarity=0.217  Sum_probs=59.2

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.+|.+++|+||+++.+++.+....+++||||++|+|.+.+......+.......++.....+..|+|.       .
T Consensus       202 ~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~-------~  274 (573)
T 3uto_A          202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE-------N  274 (573)
T ss_dssp             HHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-------C
Confidence            349999999999999999999999999999999999999999886543333333333344444444444443       2


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.+++.++
T Consensus       275 ~iiHRDlKp~Ni  286 (573)
T 3uto_A          275 NYVHLDLKPENI  286 (573)
T ss_dssp             TEECCCCCGGGE
T ss_pred             CeeeccCChhhc
Confidence            344555555443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.26  E-value=1.2e-07  Score=70.10  Aligned_cols=50  Identities=20%  Similarity=0.359  Sum_probs=41.7

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCC------------ceeEEeeecCCCchhhhhhhcc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPP------------HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~------------~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .+.+ |+.++++++|+||+++++++.+.+            ..+++||||++|++.+.+....
T Consensus        49 ~~~~-E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~  110 (299)
T 4g31_A           49 KVMR-EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC  110 (299)
T ss_dssp             HHHH-HHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCC
T ss_pred             HHHH-HHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcC
Confidence            3444 999999999999999999986543            3689999999999999987643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.15  E-value=6e-07  Score=68.32  Aligned_cols=72  Identities=22%  Similarity=0.331  Sum_probs=52.7

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceee
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      .|.+ |+.++.++.|+|++++.|+|.+.+..++++|||++|++.+.+......+.......+......+..++
T Consensus       158 ~~~~-E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L  229 (377)
T 3cbl_A          158 KFLQ-EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL  229 (377)
T ss_dssp             TTTH-HHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4555 99999999999999999999998899999999999999998876543333333333333333333333

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.14  E-value=1.1e-06  Score=67.07  Aligned_cols=103  Identities=9%  Similarity=-0.026  Sum_probs=64.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh--------------hhHHHHHHHHHHHcCCCcchhhhhee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID--------------LTRPLLLELKRLKDLHHDHLVKFIGA  131 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~--------------~~~~~~~e~~~l~~l~h~ni~~l~~~  131 (184)
                      +.+...++.|+.+.||.+.   ...|+.||+|.++.....              ....+..+..+.....|+|+.+++..
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~---d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVA---DEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEE---CTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCEeeeCCceEEEEEE---CCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            5667789999999999875   246899999998653210              11223444444445567777776543


Q ss_pred             eecCC------cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhh
Q psy8884         132 CLDPP------HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRV  178 (184)
Q Consensus       132 ~~~~~------~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~  178 (184)
                      .....      .-++||||++++++..+...       .....+..|++.+|.
T Consensus       174 gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~  219 (397)
T 4gyi_A          174 GFPVPEPIAQSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALIL  219 (397)
T ss_dssp             TCSCCCEEEEETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHH
T ss_pred             CCCCCeeeeccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHH
Confidence            22211      12699999999887654321       123456788888887

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.12  E-value=5.4e-07  Score=68.53  Aligned_cols=71  Identities=18%  Similarity=0.343  Sum_probs=52.5

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceee
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      |.+ |+.++.++.|+|++++.++|.+....++++|||++|++.+.+......+.......+......+..++
T Consensus        93 ~~~-E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L  163 (373)
T 2qol_A           93 FLG-EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL  163 (373)
T ss_dssp             HHH-HHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            444 89999999999999999999999999999999999999999876543444333333333333333333

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.08  E-value=5.8e-07  Score=66.95  Aligned_cols=71  Identities=11%  Similarity=0.162  Sum_probs=53.3

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++..+.|+|++++.+++.+....++++|||++|++.+.+......++......++.....+..+++
T Consensus        49 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  119 (321)
T 1tki_A           49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH  119 (321)
T ss_dssp             HHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34999999999999999999999999999999999999999988765434444333344444444444443

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.06  E-value=1e-06  Score=64.98  Aligned_cols=72  Identities=25%  Similarity=0.385  Sum_probs=53.2

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      |.+ |+.++.++.|+|+++++++|.+....++++|||++|++.+.+......+.......+......+..+++
T Consensus        54 ~~~-E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  125 (310)
T 3s95_A           54 FLK-EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH  125 (310)
T ss_dssp             HHH-HHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            444 999999999999999999999999999999999999999998864434443333333333333333433

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.03  E-value=1.2e-06  Score=65.29  Aligned_cols=55  Identities=18%  Similarity=0.329  Sum_probs=46.2

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|.+ |+.++.++.|+|++++.++|.+....++++|||++|++.+.+......+..
T Consensus        96 ~~~~-E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  150 (325)
T 3kul_A           96 DFLS-EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI  150 (325)
T ss_dssp             HHHH-HHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCH
T ss_pred             HHHH-HHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCH
Confidence            3444 899999999999999999999988899999999999999998654333433

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.02  E-value=1.8e-06  Score=68.05  Aligned_cols=49  Identities=29%  Similarity=0.602  Sum_probs=44.3

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      ..|.+ |+.++.++.|+|+++++|+|.+.+..++++|||++|++.+.+..
T Consensus       261 ~~~~~-E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  309 (495)
T 1opk_A          261 EEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  309 (495)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HHHHH-HHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHh
Confidence            34555 99999999999999999999999999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.00  E-value=1.2e-06  Score=63.80  Aligned_cols=47  Identities=30%  Similarity=0.440  Sum_probs=43.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+.+..++++|||++|++.+.+....
T Consensus        61 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  107 (289)
T 4fvq_A           61 EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK  107 (289)
T ss_dssp             HHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG
T ss_pred             HHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC
Confidence            38899999999999999999999999999999999999999987654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.00  E-value=1.7e-06  Score=65.77  Aligned_cols=69  Identities=20%  Similarity=0.289  Sum_probs=51.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||+++++.+.+......+.......++.....+..++
T Consensus       135 ~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L  203 (373)
T 2x4f_A          135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM  203 (373)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999999999999999999999999888865543444433333333333333333

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.95  E-value=3e-06  Score=64.82  Aligned_cols=71  Identities=20%  Similarity=0.258  Sum_probs=52.6

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++.++.|+|++++.+++.+....++++|||++|++.+.+......+.......++.....+..+++
T Consensus        96 ~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  166 (387)
T 1kob_A           96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH  166 (387)
T ss_dssp             HHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34999999999999999999999999999999999999999988765433443333334434333333443

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.91  E-value=2.8e-06  Score=69.10  Aligned_cols=83  Identities=13%  Similarity=0.064  Sum_probs=59.2

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcEE
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKV   94 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v   94 (184)
                      ++.++..+.|+|||++.+++.+....++|||||++|+|.+.+.... .++.-....+......+..|+|.       ..+
T Consensus       242 ~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~-------~gI  313 (689)
T 3v5w_A          242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN-------RFV  313 (689)
T ss_dssp             HHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHT-------TTE
T ss_pred             HHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH-------CCc
Confidence            3566778899999999999999999999999999999999987643 22222222334444444445553       457


Q ss_pred             EEeEeeccchh
Q psy8884          95 AIKNLKKSRID  105 (184)
Q Consensus        95 avK~l~~~~~~  105 (184)
                      +++.+++.++.
T Consensus       314 iHRDLKPeNIL  324 (689)
T 3v5w_A          314 VYRDLKPANIL  324 (689)
T ss_dssp             ECCCCSGGGEE
T ss_pred             cccCCchHHeE
Confidence            77777777653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.91  E-value=2.8e-06  Score=68.20  Aligned_cols=69  Identities=12%  Similarity=0.085  Sum_probs=52.7

Q ss_pred             chhhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          11 FVPTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        11 ~~~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      |.+ |+++|.++ .|+|++++++++.+....++|||||++++|.+.+..... +   +..+++.....+..|.|.
T Consensus       288 ~~~-E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~-l---~~~~I~~QIl~AL~ylH~  357 (569)
T 4azs_A          288 LHN-EIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE-I---DREKILGSLLRSLAALEK  357 (569)
T ss_dssp             HHH-HHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC-C---CHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC-C---CHHHHHHHHHHHHHHHHH
Confidence            444 99999999 799999999999999999999999999999999876542 2   222344444444445543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.90  E-value=2.3e-06  Score=61.81  Aligned_cols=47  Identities=30%  Similarity=0.595  Sum_probs=43.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        54 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  100 (269)
T 4hcu_A           54 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR  100 (269)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTT
T ss_pred             HHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcC
Confidence            49999999999999999999999999999999999999999886544

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.90  E-value=4.6e-06  Score=60.09  Aligned_cols=47  Identities=30%  Similarity=0.489  Sum_probs=43.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||+++++.+.+....
T Consensus        52 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   98 (268)
T 3sxs_A           52 QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG   98 (268)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHG
T ss_pred             HHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcC
Confidence            48999999999999999999999999999999999999999887644

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.86  E-value=5.7e-06  Score=64.30  Aligned_cols=48  Identities=17%  Similarity=0.128  Sum_probs=43.9

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .+.|..++.++.|+|++++.++|.+....++++|||++|++.+.+...
T Consensus       121 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~  168 (437)
T 4aw2_A          121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF  168 (437)
T ss_dssp             HHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHc
Confidence            445899999999999999999999999999999999999999998763

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.84  E-value=3.4e-06  Score=64.78  Aligned_cols=82  Identities=16%  Similarity=0.260  Sum_probs=55.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccC------CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD------PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      .|+.+|.++.|+||+++.+++.+      ....+++||||. |++.+.+.... .+..-....++.....+..|+|.   
T Consensus       102 ~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~---  176 (398)
T 4b99_A          102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS---  176 (398)
T ss_dssp             HHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---
Confidence            39999999999999999998754      356899999995 77888876543 33333333445555555556554   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..++++.+|+.++
T Consensus       177 ----~~iiHRDlKP~NI  189 (398)
T 4b99_A          177 ----AQVIHRDLKPSNL  189 (398)
T ss_dssp             ----TTCBCCCCCGGGE
T ss_pred             ----CcCcCCCcCcccc
Confidence                3345556665554

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=97.83  E-value=5.5e-06  Score=64.55  Aligned_cols=51  Identities=31%  Similarity=0.540  Sum_probs=43.6

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCC-ceeEEeeecCCCchhhhhhhcc
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~-~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|.+ |+.++.++.|+|+++++++|.+.. ..++++|||++|++.+.+....
T Consensus       231 ~~~~~-E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  282 (450)
T 1k9a_A          231 QAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG  282 (450)
T ss_dssp             HHHHH-HHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHC
T ss_pred             HHHHH-HHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcC
Confidence            34455 999999999999999999987765 6899999999999999987643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=97.82  E-value=6.6e-06  Score=62.31  Aligned_cols=47  Identities=17%  Similarity=0.300  Sum_probs=43.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        63 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  109 (361)
T 2yab_A           63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK  109 (361)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTC
T ss_pred             HHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhc
Confidence            34999999999999999999999999999999999999999988654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.82  E-value=3.1e-05  Score=55.67  Aligned_cols=107  Identities=11%  Similarity=-0.103  Sum_probs=69.9

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEee
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +.+......+....+|...    ..+..+++|............+.+|...++.+. +..+.++++.+...+..|++|||
T Consensus        16 ~~~~~~~~g~s~~~v~~~~----~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLV----GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEE----CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             ceeEeeccCCCCCeEEEEE----CCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            3333333333334455542    346799999987643222345888999998874 56677888888878889999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|.++.+.+..      ......++.+++++|+..++
T Consensus        92 i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           92 ADGVLCSEEYED------EQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             CSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCeehhhccCC------cccHHHHHHHHHHHHHHHhC
Confidence            999998776321      11223566777777776554

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=97.80  E-value=6.4e-06  Score=62.77  Aligned_cols=48  Identities=15%  Similarity=0.271  Sum_probs=43.4

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ...|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        73 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B           73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhh
Confidence            334999999999999999999999999999999999999999988754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.79  E-value=3.9e-06  Score=67.94  Aligned_cols=73  Identities=19%  Similarity=0.304  Sum_probs=52.4

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|.+ |+.++.++.|+|+++++|+|.+ +..++++|||++|++.+.+......+.......+......+..|++
T Consensus       381 ~~~~~-E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH  453 (613)
T 2ozo_A          381 EEMMR-EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE  453 (613)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34455 9999999999999999999977 4589999999999999988755433444333344444444444443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=97.79  E-value=8.5e-06  Score=61.83  Aligned_cols=46  Identities=24%  Similarity=0.572  Sum_probs=42.5

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|+++++++|.+.+..++++|||++|++.+.+...
T Consensus       135 ~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          135 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             HHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhh
Confidence            389999999 8999999999999999999999999999999988764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.78  E-value=8.7e-06  Score=60.63  Aligned_cols=46  Identities=20%  Similarity=0.338  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        63 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  108 (326)
T 2y0a_A           63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK  108 (326)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTS
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhc
Confidence            4999999999999999999999999999999999999999988653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.78  E-value=4.3e-06  Score=60.17  Aligned_cols=49  Identities=33%  Similarity=0.657  Sum_probs=43.1

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhhhhhhcc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |.+ |+.++.++.|+|++++.++|.+.  ...++++|||++|++.+.+....
T Consensus        54 ~~~-E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  104 (271)
T 3kmu_A           54 FNE-ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT  104 (271)
T ss_dssp             HHH-HGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCS
T ss_pred             HHH-HHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcc
Confidence            444 89999999999999999999887  67899999999999999987643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.77  E-value=4.6e-06  Score=62.27  Aligned_cols=52  Identities=15%  Similarity=0.287  Sum_probs=44.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+......+..
T Consensus        95 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  146 (333)
T 1mqb_A           95 GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV  146 (333)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCH
T ss_pred             HHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCH
Confidence            3889999999999999999999999999999999999999988764433333

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.77  E-value=6.2e-06  Score=60.58  Aligned_cols=48  Identities=17%  Similarity=0.347  Sum_probs=43.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++.++.|+|++++.+++.+.+..++++|||++|++.+.+....
T Consensus        65 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  112 (297)
T 3fxz_A           65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC  112 (297)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC
T ss_pred             HHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcC
Confidence            348999999999999999999999999999999999999999887653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.76  E-value=1.1e-05  Score=59.76  Aligned_cols=47  Identities=30%  Similarity=0.441  Sum_probs=43.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+.+..++++|||++|++.+.+....
T Consensus        84 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  130 (321)
T 2qkw_B           84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD  130 (321)
T ss_dssp             HHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSC
T ss_pred             HHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccC
Confidence            48999999999999999999999999999999999999999886543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.76  E-value=5.8e-06  Score=61.67  Aligned_cols=46  Identities=26%  Similarity=0.517  Sum_probs=42.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||++|++.+.+...
T Consensus        99 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A           99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHh
Confidence            3899999999999999999999999999999999999999988753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.74  E-value=9.3e-06  Score=60.69  Aligned_cols=47  Identities=28%  Similarity=0.581  Sum_probs=42.9

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++ .|+|++++.++|.+.+..++++|||++|++.+.+....
T Consensus        97 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A           97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             HHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhcc
Confidence            489999999 89999999999999999999999999999999887643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.74  E-value=6.1e-06  Score=62.55  Aligned_cols=46  Identities=17%  Similarity=0.206  Sum_probs=41.3

Q ss_pred             hhhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhh
Q psy8884          12 VPTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        12 ~~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~   57 (184)
                      ...|+.++..+ .|+|++++..++.+.+..+++||||++|++.+.+.
T Consensus        66 ~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN  112 (361)
T ss_dssp             HHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc
Confidence            34588999988 69999999999999999999999999999998875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.74  E-value=5.4e-06  Score=61.23  Aligned_cols=56  Identities=25%  Similarity=0.652  Sum_probs=47.1

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      ..+.+ |+.++.++.|+|++++.+++.+.+..++++|||+++++.+.+......++.
T Consensus        74 ~~~~~-e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~  129 (319)
T 2y4i_B           74 KAFKR-EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV  129 (319)
T ss_dssp             CCCCT-TGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCS
T ss_pred             HHHHH-HHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCH
Confidence            44455 999999999999999999999999999999999999999988765433333

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.74  E-value=9.5e-06  Score=62.57  Aligned_cols=48  Identities=19%  Similarity=0.113  Sum_probs=43.6

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .+.|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus       108 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~  155 (412)
T 2vd5_A          108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF  155 (412)
T ss_dssp             HHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhc
Confidence            345889999999999999999999999999999999999999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.73  E-value=5.5e-06  Score=61.29  Aligned_cols=46  Identities=35%  Similarity=0.643  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++|||++|++.+.+...
T Consensus        83 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  128 (309)
T 3p86_A           83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS  128 (309)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHST
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhc
Confidence            3899999999999999999999999999999999999999988754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.72  E-value=6.7e-06  Score=59.73  Aligned_cols=47  Identities=26%  Similarity=0.491  Sum_probs=43.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||+++++.+.+....
T Consensus        68 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (283)
T 3gen_A           68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR  114 (283)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGG
T ss_pred             HHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhc
Confidence            48999999999999999999999999999999999999999887633

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.72  E-value=6.9e-06  Score=61.83  Aligned_cols=46  Identities=13%  Similarity=0.109  Sum_probs=41.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      ..|+.++.++.|+|++++++++.+....++++|||+++++.+.+..
T Consensus        74 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A           74 KREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK  119 (351)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHH
Confidence            3499999999999999999999999999999999999999877654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.72  E-value=5.4e-06  Score=59.61  Aligned_cols=47  Identities=32%  Similarity=0.628  Sum_probs=43.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+....
T Consensus        52 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   98 (267)
T 3t9t_A           52 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR   98 (267)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTT
T ss_pred             HHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCc
Confidence            48999999999999999999999999999999999999999887643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.72  E-value=5.5e-06  Score=62.77  Aligned_cols=47  Identities=21%  Similarity=0.396  Sum_probs=42.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++++++.+....++++|||++|++.+.+....
T Consensus       123 ~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  169 (367)
T 3l9p_A          123 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR  169 (367)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHS
T ss_pred             HHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhc
Confidence            38889999999999999999999988999999999999999887643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.71  E-value=1.4e-05  Score=59.28  Aligned_cols=47  Identities=23%  Similarity=0.426  Sum_probs=43.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.++|.+....++++|||++|++.+.+...
T Consensus        75 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 3uim_A           75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER  121 (326)
T ss_dssp             HHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCC
T ss_pred             HHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhc
Confidence            44999999999999999999999999999999999999999988754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.71  E-value=9.2e-06  Score=63.98  Aligned_cols=46  Identities=24%  Similarity=0.253  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++..+.|+|+++++++|.+....++++|||++|++.+.+...
T Consensus        85 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~  130 (494)
T 3lij_A           85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR  130 (494)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHc
Confidence            4999999999999999999999999999999999999998877643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.69  E-value=8.6e-06  Score=61.63  Aligned_cols=46  Identities=13%  Similarity=0.207  Sum_probs=42.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        77 ~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  122 (362)
T 2bdw_A           77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR  122 (362)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHc
Confidence            4999999999999999999999999999999999999998877654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.69  E-value=1.4e-05  Score=58.78  Aligned_cols=46  Identities=35%  Similarity=0.631  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        75 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  120 (314)
T 2ivs_A           75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES  120 (314)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHH
Confidence            4899999999999999999999999999999999999999988754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=97.68  E-value=1.3e-05  Score=63.30  Aligned_cols=46  Identities=26%  Similarity=0.385  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||++|++.+.+...
T Consensus        95 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  140 (504)
T 3q5i_A           95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR  140 (504)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc
Confidence            4899999999999999999999999999999999999998877654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.67  E-value=6.7e-06  Score=62.53  Aligned_cols=50  Identities=24%  Similarity=0.465  Sum_probs=41.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccC-CCceeEEeeecCCCchhhhhhhcccCc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD-PPHCCLLTEYCPKGSLQDILENEQFKL   63 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~-~~~~~~~~e~~~~~~l~~~l~~~~~~~   63 (184)
                      .|+.++.++.|+|++++.++|.+ .+..++++|||++|++.+.+......+
T Consensus       139 ~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~  189 (373)
T 3c1x_A          139 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP  189 (373)
T ss_dssp             HHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCC
T ss_pred             HHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCC
Confidence            38889999999999999999865 456889999999999999987654333

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=97.67  E-value=1.3e-05  Score=59.72  Aligned_cols=47  Identities=32%  Similarity=0.476  Sum_probs=42.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++..+.|+|++++++++.+....++++|||++|++.+.+...
T Consensus        53 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (323)
T 3tki_A           53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD   99 (323)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTT
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhc
Confidence            34999999999999999999999999999999999999999888654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.67  E-value=1.3e-05  Score=58.11  Aligned_cols=48  Identities=19%  Similarity=0.290  Sum_probs=43.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||++.+++.+.+....
T Consensus        59 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  106 (278)
T 3cok_A           59 QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV  106 (278)
T ss_dssp             HHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCS
T ss_pred             HHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhcc
Confidence            348899999999999999999999999999999999999998887643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=97.67  E-value=7.8e-06  Score=61.05  Aligned_cols=46  Identities=24%  Similarity=0.320  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        63 ~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  108 (328)
T 3fe3_A           63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH  108 (328)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHc
Confidence            3899999999999999999999999999999999999999887654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=97.66  E-value=1.2e-05  Score=61.95  Aligned_cols=49  Identities=18%  Similarity=0.194  Sum_probs=44.1

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ...|..++..+.|+|++++.++|.+....++++|||++|++.+.+.+..
T Consensus       116 ~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~  164 (410)
T 3v8s_A          116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD  164 (410)
T ss_dssp             HHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCC
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCC
Confidence            3448999999999999999999999999999999999999999887654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=97.66  E-value=1.6e-05  Score=58.28  Aligned_cols=48  Identities=29%  Similarity=0.588  Sum_probs=41.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++.++.|+|++++.+++.+.  ...++++||++++++.+.+....
T Consensus        71 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  120 (302)
T 4e5w_A           71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK  120 (302)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc
Confidence            3489999999999999999999876  56789999999999999886543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.65  E-value=7.5e-06  Score=63.81  Aligned_cols=48  Identities=31%  Similarity=0.535  Sum_probs=42.1

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      +.|.+ |+.++.++.|+|+++++++|.+ +..++++|||++|++.+.+..
T Consensus       224 ~~~~~-E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          224 EAFLQ-EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  271 (452)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSH
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHh
Confidence            34555 9999999999999999999987 568999999999999998875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.65  E-value=3.8e-06  Score=61.43  Aligned_cols=52  Identities=35%  Similarity=0.639  Sum_probs=42.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|+.++.++.|+|++++.++|.+.  ...++++|||++|++.+.+......++.
T Consensus        60 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  113 (295)
T 3ugc_A           60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH  113 (295)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCH
Confidence            489999999999999999998653  4578999999999999988765433333

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=97.63  E-value=1e-05  Score=61.12  Aligned_cols=47  Identities=26%  Similarity=0.504  Sum_probs=42.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+..+.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        64 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  110 (361)
T 3uc3_A           64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA  110 (361)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhc
Confidence            34899999999999999999999999999999999999998887653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=97.62  E-value=1.8e-05  Score=58.77  Aligned_cols=47  Identities=17%  Similarity=0.345  Sum_probs=42.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++..+.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        54 ~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  100 (318)
T 1fot_A           54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS  100 (318)
T ss_dssp             HHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHT
T ss_pred             HHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHc
Confidence            34888899999999999999999999999999999999999988754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.61  E-value=1e-05  Score=59.33  Aligned_cols=46  Identities=20%  Similarity=0.307  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++.|+|++++.+++.+.+..++++|||+++++.+.+...
T Consensus        60 ~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~  105 (294)
T 4eqm_A           60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH  105 (294)
T ss_dssp             HHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhc
Confidence            3889999999999999999999999999999999999999988754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.61  E-value=1e-05  Score=60.83  Aligned_cols=46  Identities=24%  Similarity=0.300  Sum_probs=41.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.++|.+....++++||+++|++.+.+...
T Consensus        97 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  142 (349)
T 2w4o_A           97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK  142 (349)
T ss_dssp             --CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhc
Confidence            4999999999999999999999999999999999999998887654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.61  E-value=1.7e-05  Score=58.91  Aligned_cols=46  Identities=33%  Similarity=0.581  Sum_probs=40.1

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCc----eeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPH----CCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~----~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+.++.++.|+|++++++++.+...    .++++|||++|++.+.+....
T Consensus        68 E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  117 (322)
T 3soc_A           68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV  117 (322)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC
T ss_pred             HHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcC
Confidence            7788999999999999999987543    699999999999999987654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.61  E-value=2e-05  Score=57.01  Aligned_cols=46  Identities=20%  Similarity=0.382  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||+++++.+.+...
T Consensus        55 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  100 (277)
T 3f3z_A           55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK  100 (277)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHc
Confidence            4899999999999999999999999999999999999998877654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.60  E-value=1.5e-05  Score=59.26  Aligned_cols=46  Identities=22%  Similarity=0.345  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.++|.+....++++||++++++.+.+...
T Consensus        91 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  136 (321)
T 2c30_A           91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV  136 (321)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC
T ss_pred             HHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc
Confidence            4999999999999999999999999999999999999999988754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.60  E-value=2.1e-05  Score=58.52  Aligned_cols=47  Identities=23%  Similarity=0.283  Sum_probs=42.4

Q ss_pred             hhhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+..+..+. |+|++++.+++.+....++++|||++|++.+.+...
T Consensus        53 ~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (325)
T 3kn6_A           53 QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK  100 (325)
T ss_dssp             HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhc
Confidence            34888899997 999999999999999999999999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.59  E-value=2.3e-05  Score=57.98  Aligned_cols=46  Identities=37%  Similarity=0.644  Sum_probs=40.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC--ceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~--~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+..  ..++++|||+++++.+.+...
T Consensus        56 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP  103 (319)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSG
T ss_pred             HHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHh
Confidence            4899999999999999999987654  679999999999999988754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.59  E-value=1.7e-05  Score=58.86  Aligned_cols=46  Identities=33%  Similarity=0.587  Sum_probs=42.3

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.+++.+.+..++++|||++|++.+.+...
T Consensus        74 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  120 (327)
T 1fvr_A           74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS  120 (327)
T ss_dssp             HHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTT
T ss_pred             HHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhc
Confidence            389999999 8999999999999999999999999999999988754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.59  E-value=1.2e-05  Score=62.57  Aligned_cols=47  Identities=15%  Similarity=0.211  Sum_probs=42.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+....
T Consensus        59 ~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~  105 (444)
T 3soa_A           59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE  105 (444)
T ss_dssp             HHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCS
T ss_pred             HHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcC
Confidence            49999999999999999999999999999999999999988876543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.59  E-value=1.6e-05  Score=59.10  Aligned_cols=46  Identities=28%  Similarity=0.629  Sum_probs=42.1

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.++|.+.+..++++|||++|++.+.+...
T Consensus        98 ~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A           98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHh
Confidence            489999999 8999999999999999999999999999999988653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.59  E-value=1.8e-05  Score=62.09  Aligned_cols=47  Identities=23%  Similarity=0.408  Sum_probs=42.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++..+.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        64 ~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  110 (476)
T 2y94_A           64 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN  110 (476)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSS
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhc
Confidence            34899999999999999999999999999999999999999988653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=97.58  E-value=1.5e-05  Score=60.61  Aligned_cols=47  Identities=23%  Similarity=0.580  Sum_probs=42.9

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++ .|+|++++.++|.+.+..++++|||++|++.+.+....
T Consensus       123 ~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             HHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhc
Confidence            488999999 99999999999999999999999999999999887643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=97.56  E-value=1.3e-05  Score=59.02  Aligned_cols=46  Identities=30%  Similarity=0.542  Sum_probs=42.5

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.++|.+.+..++++|||+.|++.+.+...
T Consensus        75 ~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A           75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             HHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhc
Confidence            489999999 9999999999999999999999999999999988754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.56  E-value=1e-05  Score=60.88  Aligned_cols=68  Identities=26%  Similarity=0.423  Sum_probs=47.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||+ |++.+.+......+.......+......+..++
T Consensus       103 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L  170 (348)
T 1u5q_A          103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL  170 (348)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999997 777777654333333333333333333333333

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.56  E-value=1.3e-05  Score=58.70  Aligned_cols=47  Identities=23%  Similarity=0.465  Sum_probs=41.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++|||+++++.+.+....
T Consensus        65 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~  111 (302)
T 2j7t_A           65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD  111 (302)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHT
T ss_pred             HHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhc
Confidence            38899999999999999999999999999999999999988876533

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.55  E-value=7e-06  Score=65.36  Aligned_cols=48  Identities=31%  Similarity=0.535  Sum_probs=42.2

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      +.|.+ |+.++.++.|+|+++++++|.+ ...++++|||++|++.+.+..
T Consensus       307 ~~~~~-E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          307 EAFLQ-EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSH
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhh
Confidence            34555 9999999999999999999987 568999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=97.55  E-value=2.6e-05  Score=57.57  Aligned_cols=69  Identities=17%  Similarity=0.249  Sum_probs=48.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+ |++.+.+......+.......+......+..+++
T Consensus        68 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH  136 (311)
T 3niz_A           68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH  136 (311)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            49999999999999999999999999999999997 5777766554333333333333333333333433

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.55  E-value=1.4e-05  Score=58.03  Aligned_cols=50  Identities=24%  Similarity=0.577  Sum_probs=41.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE   64 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~   64 (184)
                      .|+.++.++.|+|++++.+++.+ +..++++||++.+++.+.+......++
T Consensus        65 ~e~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~  114 (281)
T 1mp8_A           65 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD  114 (281)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECS-SSCEEEEECCTTEEHHHHHHHTTTTSC
T ss_pred             HHHHHHHhCCCCccceEEEEEcc-CccEEEEecCCCCCHHHHHHhcCCCCC
Confidence            38899999999999999999855 558899999999999998876543333

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.54  E-value=2.9e-05  Score=57.65  Aligned_cols=47  Identities=38%  Similarity=0.680  Sum_probs=40.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC--ceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~--~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+.+  ..++++||++++++.+.+....
T Consensus        91 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  139 (326)
T 2w1i_A           91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK  139 (326)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHST
T ss_pred             HHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc
Confidence            4899999999999999999987654  6799999999999999887654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.54  E-value=2.5e-05  Score=57.83  Aligned_cols=46  Identities=17%  Similarity=0.311  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        64 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (321)
T 2a2a_A           64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK  109 (321)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTC
T ss_pred             HHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhc
Confidence            4899999999999999999999999999999999999999988653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.54  E-value=2.3e-05  Score=57.03  Aligned_cols=46  Identities=22%  Similarity=0.411  Sum_probs=40.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++ +.+..++++||++++++.+.+....
T Consensus        59 ~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~  104 (287)
T 1u59_A           59 REAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR  104 (287)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCT
T ss_pred             HHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCC
Confidence            389999999999999999999 4456899999999999999886543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=97.54  E-value=2.4e-05  Score=58.15  Aligned_cols=45  Identities=31%  Similarity=0.609  Sum_probs=39.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++.|+|+++++++|.+ +..++++||+++|++.+.+...
T Consensus        64 ~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           64 DHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECB-SSEEEEEECCTTCBSHHHHHSS
T ss_pred             HHHHHHhcCCCCCcCeEEEEEcC-CccEEEEEeCCCCCHHHHHHHc
Confidence            38889999999999999999875 5588999999999999988764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.54  E-value=3.5e-05  Score=56.58  Aligned_cols=45  Identities=31%  Similarity=0.530  Sum_probs=41.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+..
T Consensus        79 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (307)
T 2nru_A           79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC  123 (307)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             HHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence            489999999999999999999999999999999999999988764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=97.54  E-value=2.2e-05  Score=59.92  Aligned_cols=46  Identities=17%  Similarity=0.256  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        64 ~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  109 (384)
T 4fr4_A           64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN  109 (384)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTT
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhc
Confidence            4899999999999999999999999999999999999999888754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.53  E-value=9.2e-06  Score=63.32  Aligned_cols=49  Identities=33%  Similarity=0.546  Sum_probs=41.8

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      +.|.+ |+.++.++.|+|++++.++|.+ +..++++|||++|++.+.+...
T Consensus       228 ~~~~~-E~~~l~~l~h~~iv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          228 EAFLA-EANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHHSH
T ss_pred             HHHHH-HHHHHhhCCCCCEeeEEEEEeC-CccEEEEeecCCCcHHHHHHhc
Confidence            34445 9999999999999999999874 5689999999999999998743

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.53  E-value=3e-05  Score=56.22  Aligned_cols=46  Identities=17%  Similarity=0.347  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++.+++.+.+...
T Consensus        57 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  102 (283)
T 3bhy_A           57 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK  102 (283)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhc
Confidence            4899999999999999999999999999999999999999988653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=97.53  E-value=1.7e-05  Score=58.90  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=42.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+....
T Consensus        82 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  128 (327)
T 2yfx_A           82 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR  128 (327)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTS
T ss_pred             HHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhc
Confidence            38889999999999999999999988999999999999999887643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=97.53  E-value=2.1e-05  Score=57.95  Aligned_cols=46  Identities=24%  Similarity=0.514  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+.+++.+.+...
T Consensus        73 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  118 (314)
T 3com_A           73 KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR  118 (314)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhc
Confidence            4899999999999999999999989999999999999999988643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=97.52  E-value=1.8e-05  Score=58.86  Aligned_cols=69  Identities=22%  Similarity=0.416  Sum_probs=49.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|+++++++|.+.. .+++++|++.|++.+.+......+.......+......+..+++
T Consensus        66 ~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH  134 (327)
T 3poz_A           66 DEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE  134 (327)
T ss_dssp             HHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            3899999999999999999998865 77899999999999988765434443333333333333333333

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.52  E-value=1.4e-05  Score=62.71  Aligned_cols=46  Identities=22%  Similarity=0.288  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        70 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  115 (486)
T 3mwu_A           70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR  115 (486)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhc
Confidence            4999999999999999999999999999999999999998877643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.52  E-value=2.6e-05  Score=59.65  Aligned_cols=46  Identities=37%  Similarity=0.644  Sum_probs=40.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC--ceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~--~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+..  ..++++|||++|++.+.+...
T Consensus        56 ~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP  103 (396)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSG
T ss_pred             HHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhh
Confidence            4999999999999999999987654  679999999999999988754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=97.52  E-value=3e-05  Score=58.45  Aligned_cols=46  Identities=20%  Similarity=0.210  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        90 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  135 (350)
T 1rdq_E           90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI  135 (350)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc
Confidence            4888999999999999999999999999999999999999988753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.52  E-value=1.7e-05  Score=59.60  Aligned_cols=46  Identities=28%  Similarity=0.614  Sum_probs=40.5

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCc-eeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPH-CCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~-~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|+++++++|.+.+. .++++|||++|++.+.+...
T Consensus        74 ~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           74 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             HHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence            499999999 78999999999988654 89999999999999988764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=97.51  E-value=1.5e-05  Score=59.39  Aligned_cols=47  Identities=28%  Similarity=0.302  Sum_probs=41.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++++++.+.+..++++|||+++++.+.+...
T Consensus        69 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  115 (327)
T 3a62_A           69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE  115 (327)
T ss_dssp             --HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhC
Confidence            34899999999999999999999999999999999999998888754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.51  E-value=3.1e-05  Score=57.48  Aligned_cols=48  Identities=33%  Similarity=0.561  Sum_probs=41.1

Q ss_pred             hhhhhhhhhcCCCCcceeecccc--CCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACL--DPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~--~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++.++.|+|++++.+++.  +....++++|||+++++.+.+....
T Consensus        72 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  121 (327)
T 3lxl_A           72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR  121 (327)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG
T ss_pred             HHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc
Confidence            34999999999999999999886  4456889999999999999887643

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.51  E-value=1.1e-05  Score=59.09  Aligned_cols=49  Identities=12%  Similarity=0.247  Sum_probs=43.3

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|.+ |+..+.++.|+|++++++++.+.+..++++|||+++++.+.+...
T Consensus        77 ~~~~-e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~  125 (286)
T 3uqc_A           77 ETLS-RTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS  125 (286)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC
T ss_pred             HHHH-HHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC
Confidence            3444 888999999999999999999999999999999999999988653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=97.51  E-value=3.5e-05  Score=57.37  Aligned_cols=46  Identities=24%  Similarity=0.572  Sum_probs=42.2

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.++|.+....++++|||++|++.+.+...
T Consensus        89 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  135 (334)
T 2pvf_A           89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  135 (334)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTT
T ss_pred             HHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHh
Confidence            488899999 8999999999999999999999999999999988754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=97.50  E-value=3e-05  Score=58.17  Aligned_cols=47  Identities=17%  Similarity=0.199  Sum_probs=41.9

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        63 ~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ  110 (342)
T ss_dssp             HHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc
Confidence            3488888888 7999999999999999999999999999999887654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.50  E-value=1.2e-05  Score=58.46  Aligned_cols=45  Identities=29%  Similarity=0.597  Sum_probs=42.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+..
T Consensus        58 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  102 (288)
T 3kfa_A           58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  102 (288)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence            389999999999999999999999999999999999999998865

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=97.49  E-value=2e-05  Score=57.46  Aligned_cols=45  Identities=22%  Similarity=0.370  Sum_probs=41.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+..
T Consensus        69 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (285)
T 3is5_A           69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS  113 (285)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHH
T ss_pred             HHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHh
Confidence            489999999999999999999999999999999999999887754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.49  E-value=2.2e-05  Score=64.04  Aligned_cols=54  Identities=26%  Similarity=0.575  Sum_probs=43.9

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|.+ |+.++.++.|+|+++++|+|.+ +..++++|||+.|++.+.+......++.
T Consensus       437 ~~~~-E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~  490 (656)
T 2j0j_A          437 KFLQ-EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL  490 (656)
T ss_dssp             HHHH-HHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHTTTTCCH
T ss_pred             HHHH-HHHHHHhCCCCCCCeEEEEEec-CceEEEEEcCCCCcHHHHHHhccCCCCH
Confidence            3444 8899999999999999999965 4588999999999999998765444433

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=97.48  E-value=2.3e-05  Score=58.77  Aligned_cols=47  Identities=26%  Similarity=0.268  Sum_probs=42.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        53 ~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~   99 (337)
T 1o6l_A           53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE   99 (337)
T ss_dssp             HHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhc
Confidence            34888999999999999999999999999999999999998887654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.47  E-value=2.4e-05  Score=57.80  Aligned_cols=45  Identities=18%  Similarity=0.387  Sum_probs=41.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||++|++.+.+..
T Consensus        77 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             HHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHH
Confidence            489999999999999999999999999999999999999998865

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.47  E-value=2.3e-05  Score=61.52  Aligned_cols=46  Identities=24%  Similarity=0.245  Sum_probs=42.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++++++.+....++++|||++|++.+.+...
T Consensus        75 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  120 (484)
T 3nyv_A           75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR  120 (484)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTC
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhc
Confidence            4999999999999999999999999999999999999998887654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=97.47  E-value=2.9e-05  Score=56.81  Aligned_cols=45  Identities=22%  Similarity=0.334  Sum_probs=39.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccC--CCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD--PPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~--~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+  ....++++|||+.+++.+.+..
T Consensus        85 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  131 (298)
T 2zv2_A           85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL  131 (298)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc
Confidence            49999999999999999999976  5678999999999999876544

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=97.46  E-value=2.2e-05  Score=57.19  Aligned_cols=69  Identities=20%  Similarity=0.262  Sum_probs=48.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||++. ++.+.+......+.......++.....+..+++
T Consensus        49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  117 (288)
T 1ob3_A           49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH  117 (288)
T ss_dssp             HHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999999999999999999974 787777654333333333333333333333443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.46  E-value=3.2e-05  Score=56.00  Aligned_cols=83  Identities=23%  Similarity=0.387  Sum_probs=57.3

Q ss_pred             hhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc---cCccccccchhhhhhcccceeeecceeeec
Q psy8884          15 AFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ---FKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        15 ~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      |+..+.++ .|+|++++.+++.+.+..++++|||+++++.+.+....   ..++......+......+..+++.      
T Consensus        60 e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~------  133 (289)
T 1x8b_A           60 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS------  133 (289)
T ss_dssp             HHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh------
Confidence            77778888 99999999999999999999999999999999887532   122333333444444444444443      


Q ss_pred             CcEEEEeEeeccch
Q psy8884          91 GNKVAIKNLKKSRI  104 (184)
Q Consensus        91 g~~vavK~l~~~~~  104 (184)
                       ..+++..+++.++
T Consensus       134 -~~ivH~Dikp~NI  146 (289)
T 1x8b_A          134 -MSLVHMDIKPSNI  146 (289)
T ss_dssp             -TTEECSCCSGGGE
T ss_pred             -CCEeecCCCHHHE
Confidence             2355556666554

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=97.45  E-value=4.3e-05  Score=55.74  Aligned_cols=46  Identities=24%  Similarity=0.392  Sum_probs=41.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||++++++.+.+...
T Consensus        64 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  109 (294)
T 2rku_A           64 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR  109 (294)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhc
Confidence            3888999999999999999999999999999999999998877653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=97.45  E-value=3.4e-05  Score=57.26  Aligned_cols=48  Identities=23%  Similarity=0.288  Sum_probs=41.3

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      +.+ |+.++.++.|+|++++.+++.+....++++|||+ |++.+.+....
T Consensus        47 ~~~-E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~   94 (324)
T 3mtl_A           47 AIR-EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG   94 (324)
T ss_dssp             CCC-CHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTT
T ss_pred             HHH-HHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcC
Confidence            344 9999999999999999999999999999999997 68877776543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.44  E-value=1.6e-05  Score=64.55  Aligned_cols=71  Identities=20%  Similarity=0.325  Sum_probs=49.7

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .+.+ |+.++.++.|+|+++++++|.+ +..++++|||++|++.+.+.... .+.......+......+..|++
T Consensus       416 ~~~~-E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH  486 (635)
T 4fl3_A          416 ELLA-EANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE  486 (635)
T ss_dssp             HHHH-HHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            3444 8999999999999999999965 45789999999999999887543 2333333334444444444443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=97.44  E-value=4.4e-05  Score=57.05  Aligned_cols=49  Identities=14%  Similarity=0.205  Sum_probs=42.7

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCC-chhhhhhhc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG-SLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~-~l~~~l~~~   59 (184)
                      .+.+ |+.++.++.|+|++++.+++.+.+..++++||+..| ++.+.+...
T Consensus        75 ~~~~-E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~  124 (335)
T 3dls_A           75 KVTL-EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH  124 (335)
T ss_dssp             EEEH-HHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTC
T ss_pred             HHHH-HHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhc
Confidence            3444 999999999999999999999999999999999887 888877654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.44  E-value=4e-05  Score=55.69  Aligned_cols=50  Identities=24%  Similarity=0.506  Sum_probs=41.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|+.++.++.|+|++++.+++.+..  ++++||++.|++.+.+......+..
T Consensus        72 ~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~  121 (287)
T 4f0f_A           72 REVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW  121 (287)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCH
T ss_pred             HHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccH
Confidence            3899999999999999999997766  6899999999998887654433433

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.44  E-value=2.6e-05  Score=56.93  Aligned_cols=47  Identities=23%  Similarity=0.400  Sum_probs=40.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCce-eEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHC-CLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~-~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+.... ++++||+.+|++.+.+....
T Consensus        71 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~  118 (298)
T 3pls_A           71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ  118 (298)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTT
T ss_pred             HHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccc
Confidence            388999999999999999999876554 89999999999999887644

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.44  E-value=3.9e-05  Score=56.80  Aligned_cols=45  Identities=16%  Similarity=0.359  Sum_probs=40.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++|||+ |++.+.+...
T Consensus        52 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~   96 (317)
T 2pmi_A           52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSR   96 (317)
T ss_dssp             HHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHH
T ss_pred             HHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhc
Confidence            39999999999999999999999999999999998 6888777643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.43  E-value=4.8e-05  Score=56.26  Aligned_cols=47  Identities=23%  Similarity=0.451  Sum_probs=40.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC-------------------------------------------------------
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP-------------------------------------------------------   38 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~-------------------------------------------------------   38 (184)
                      .|+.++.++.|+|+++++++|.+.+                                                       
T Consensus        53 ~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (332)
T 3qd2_B           53 REVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP  132 (332)
T ss_dssp             HHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------------------------C
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCC
Confidence            4999999999999999999986543                                                       


Q ss_pred             --ceeEEeeecCCCchhhhhhhcc
Q psy8884          39 --HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        39 --~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                        ..++++|||+++++.+.+....
T Consensus       133 ~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B          133 KVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             CCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             CceEEEEEEecCCCCHHHHHhccc
Confidence              2789999999999999887643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=97.43  E-value=4.5e-05  Score=56.89  Aligned_cols=46  Identities=24%  Similarity=0.392  Sum_probs=41.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        90 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  135 (335)
T 2owb_A           90 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR  135 (335)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhcc
Confidence            3889999999999999999999999999999999999998877653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.42  E-value=2.8e-05  Score=56.35  Aligned_cols=45  Identities=31%  Similarity=0.510  Sum_probs=39.5

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |+.++.++.|+|++++.+++.+. ..++++||++++++.+.+....
T Consensus        63 E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~  107 (281)
T 3cc6_A           63 EAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNK  107 (281)
T ss_dssp             HHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHT
T ss_pred             HHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhcc
Confidence            88999999999999999998764 4689999999999999887644

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.42  E-value=4.3e-05  Score=57.63  Aligned_cols=83  Identities=13%  Similarity=0.139  Sum_probs=56.9

Q ss_pred             hhhhhhhcC---CCCcceeeccccCCCceeEEeeecCCCchhhhhhhc----ccCccccccchhhhhhcccceeeeccee
Q psy8884          15 AFYKLKDLH---HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE----QFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus        15 ~~~~l~~l~---h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      +...+..+.   |+|++.+.+++.+.+..++++|||++|++.+.+...    ...+.......+......+..|+|.   
T Consensus       114 e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---  190 (365)
T 3e7e_A          114 GTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---  190 (365)
T ss_dssp             HHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---
Confidence            555555555   999999999999999999999999999999998742    2233333344445455555555543   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..+++..+++.++
T Consensus       191 ----~~ivHrDiKp~NI  203 (365)
T 3e7e_A          191 ----CEIIHGDIKPDNF  203 (365)
T ss_dssp             ----TTEECCCCSGGGE
T ss_pred             ----CCeecCCCCHHHE
Confidence                3356666666655

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=97.42  E-value=4e-05  Score=55.47  Aligned_cols=47  Identities=21%  Similarity=0.366  Sum_probs=42.4

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||++.+++.+.+...
T Consensus        57 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~  103 (279)
T 3fdn_A           57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL  103 (279)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhc
Confidence            34899999999999999999999999999999999999998887653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.42  E-value=3.2e-05  Score=56.54  Aligned_cols=47  Identities=26%  Similarity=0.506  Sum_probs=40.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccC-CCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD-PPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~-~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|..++.++.|+|++++.++|.+ ....++++|||++|++.+.+....
T Consensus        75 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~  122 (298)
T 3f66_A           75 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET  122 (298)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTT
T ss_pred             HHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcc
Confidence            48899999999999999999754 457789999999999999987544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=97.42  E-value=4.1e-05  Score=55.56  Aligned_cols=47  Identities=19%  Similarity=0.355  Sum_probs=42.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        62 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  108 (284)
T 2vgo_A           62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH  108 (284)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhc
Confidence            34899999999999999999999999999999999999998887654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.41  E-value=5.4e-05  Score=56.27  Aligned_cols=70  Identities=11%  Similarity=0.028  Sum_probs=52.0

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++.++ .|+|++++.+++.+....++++||+ ++++.+.+......+.......+......+..+++
T Consensus        52 ~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  122 (330)
T 2izr_A           52 HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH  122 (330)
T ss_dssp             HHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3499999999 9999999999999999999999999 99999988754333333333344444444444544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=97.40  E-value=5.3e-05  Score=60.81  Aligned_cols=47  Identities=15%  Similarity=0.111  Sum_probs=42.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus       232 ~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~  278 (576)
T 2acx_A          232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM  278 (576)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhc
Confidence            34899999999999999999999999999999999999999887654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=97.40  E-value=2.5e-05  Score=57.58  Aligned_cols=46  Identities=15%  Similarity=0.164  Sum_probs=41.3

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.+++.+.+..++++|||++|++.+.+...
T Consensus        59 ~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  105 (316)
T 2ac3_A           59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR  105 (316)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc
Confidence            388888885 7999999999999999999999999999999988754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.36  E-value=6.1e-05  Score=54.72  Aligned_cols=46  Identities=35%  Similarity=0.617  Sum_probs=40.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+.. .++++||++.+++.+.+....
T Consensus        70 ~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~  115 (291)
T 1u46_A           70 REVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ  115 (291)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHG
T ss_pred             HHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhcc
Confidence            4889999999999999999998865 889999999999998887543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.36  E-value=5.7e-05  Score=54.72  Aligned_cols=46  Identities=13%  Similarity=0.207  Sum_probs=41.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        54 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~   99 (284)
T 3kk8_A           54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR   99 (284)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhc
Confidence            4889999999999999999999999999999999999998776654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=97.35  E-value=3.4e-05  Score=58.07  Aligned_cols=46  Identities=22%  Similarity=0.310  Sum_probs=42.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        80 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  125 (360)
T 3eqc_A           80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA  125 (360)
T ss_dssp             HHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHc
Confidence            4899999999999999999999999999999999999999988754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=97.34  E-value=3e-05  Score=56.69  Aligned_cols=45  Identities=18%  Similarity=0.344  Sum_probs=38.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+..+.++.|+|++++.+++.+.+..++++||++++++.+.+..
T Consensus        62 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             ----CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHH
T ss_pred             HHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHH
Confidence            388889999999999999999999999999999999999988764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.33  E-value=4.9e-05  Score=55.34  Aligned_cols=46  Identities=24%  Similarity=0.449  Sum_probs=42.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||++++++.+.+...
T Consensus        68 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (295)
T 2clq_A           68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK  113 (295)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHT
T ss_pred             HHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhh
Confidence            4899999999999999999999999999999999999999988754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.33  E-value=2.5e-05  Score=56.99  Aligned_cols=47  Identities=28%  Similarity=0.578  Sum_probs=40.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccC-------------CCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD-------------PPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~-------------~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.++|.+             ....++++|||++|++.+.+....
T Consensus        51 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  110 (303)
T 1zy4_A           51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN  110 (303)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC
T ss_pred             HHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc
Confidence            48899999999999999998754             345789999999999999987644

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.32  E-value=4.2e-05  Score=56.11  Aligned_cols=47  Identities=19%  Similarity=0.309  Sum_probs=42.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++|||+++++.+.+...
T Consensus        54 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (304)
T 2jam_A           54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER  100 (304)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHc
Confidence            34999999999999999999999999999999999999998877643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.31  E-value=6.3e-05  Score=54.21  Aligned_cols=47  Identities=32%  Similarity=0.476  Sum_probs=42.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        53 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (276)
T 2yex_A           53 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD   99 (276)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTT
T ss_pred             HHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhc
Confidence            34889999999999999999999999999999999999998887643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.30  E-value=5.9e-05  Score=55.02  Aligned_cols=69  Identities=20%  Similarity=0.403  Sum_probs=46.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+. ++.+.+......++......+......+..+++
T Consensus        50 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH  118 (292)
T 3o0g_A           50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH  118 (292)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999975 554444433223333333333333333333433

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=97.30  E-value=5.5e-05  Score=58.02  Aligned_cols=48  Identities=19%  Similarity=0.232  Sum_probs=42.0

Q ss_pred             hhhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          12 VPTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        12 ~~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ...|..++.++ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        99 ~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~  147 (396)
T 4dc2_A           99 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ  147 (396)
T ss_dssp             HHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHc
Confidence            34578888877 8999999999999999999999999999998887754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=97.30  E-value=5.2e-05  Score=56.98  Aligned_cols=47  Identities=17%  Similarity=0.212  Sum_probs=41.6

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|..++.++ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        57 ~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  104 (345)
T 3a8x_A           57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ  104 (345)
T ss_dssp             HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc
Confidence            3478888887 8999999999999999999999999999999888653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.30  E-value=4.6e-05  Score=58.78  Aligned_cols=46  Identities=22%  Similarity=0.229  Sum_probs=39.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+ +..++++|||++|++.+.+...
T Consensus       188 ~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~  233 (419)
T 3i6u_A          188 ETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGN  233 (419)
T ss_dssp             HHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSS
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhcc
Confidence            349999999999999999999855 4578999999999998887654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=97.29  E-value=8.1e-05  Score=55.04  Aligned_cols=47  Identities=36%  Similarity=0.661  Sum_probs=41.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC--CceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++.+.  ...++++|||+.|++.+.+....
T Consensus        82 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  130 (318)
T 3lxp_A           82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS  130 (318)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC
T ss_pred             HHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC
Confidence            499999999999999999999774  56789999999999999887654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.29  E-value=0.00017  Score=53.75  Aligned_cols=44  Identities=32%  Similarity=0.540  Sum_probs=41.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++.++.|+|++++.++|.+....++++|||++|++.+.+.
T Consensus        77 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A           77 TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEE
T ss_pred             HHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHH
Confidence            39999999999999999999999999999999999999998875

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=97.28  E-value=7.7e-05  Score=54.41  Aligned_cols=46  Identities=17%  Similarity=0.284  Sum_probs=41.6

Q ss_pred             hhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++. |+|++++.+++.+....++++||++++++.+.+...
T Consensus        72 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  118 (298)
T 1phk_A           72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK  118 (298)
T ss_dssp             HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhcc
Confidence            3888899995 999999999999999999999999999999988753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=97.27  E-value=5.4e-05  Score=55.65  Aligned_cols=45  Identities=24%  Similarity=0.387  Sum_probs=40.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||+++++.+.+..
T Consensus        51 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   95 (311)
T 4agu_A           51 REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY   95 (311)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHT
T ss_pred             HHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhh
Confidence            489999999999999999999999999999999999888877654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.26  E-value=6.9e-05  Score=55.22  Aligned_cols=45  Identities=18%  Similarity=0.387  Sum_probs=39.4

Q ss_pred             hhhhhhhhcCCCCcceeecccc----CCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACL----DPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~----~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.    .....++++|||+.|++.+.+..
T Consensus        75 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A           75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHH
T ss_pred             HHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHH
Confidence            4899999999999999999986    33468899999999999988875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.25  E-value=7.9e-05  Score=54.28  Aligned_cols=45  Identities=22%  Similarity=0.450  Sum_probs=39.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++ +.+..++++||++.+++.+.+...
T Consensus        67 ~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~  111 (291)
T 1xbb_A           67 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN  111 (291)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHC
T ss_pred             HHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhC
Confidence            389999999999999999999 556689999999999999988754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=97.25  E-value=4.9e-05  Score=56.54  Aligned_cols=48  Identities=17%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .+.+ |+.++.++.|+|++++.+++.+....++++|||+ |++.+.+...
T Consensus        79 ~~~~-E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  126 (329)
T 3gbz_A           79 TAIR-EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKN  126 (329)
T ss_dssp             -CHH-HHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHC
T ss_pred             hHHH-HHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhc
Confidence            3444 9999999999999999999999999999999997 5888877654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=97.25  E-value=0.00011  Score=58.71  Aligned_cols=46  Identities=17%  Similarity=0.189  Sum_probs=42.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus       234 ~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~  279 (543)
T 3c4z_A          234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV  279 (543)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTS
T ss_pred             HHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHh
Confidence            4889999999999999999999999999999999999999887653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=97.25  E-value=6.5e-05  Score=56.66  Aligned_cols=46  Identities=17%  Similarity=0.213  Sum_probs=40.9

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++..+ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        72 ~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  118 (353)
T 3txo_A           72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS  118 (353)
T ss_dssp             HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc
Confidence            477788887 6999999999999999999999999999999888654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.24  E-value=9.4e-05  Score=54.73  Aligned_cols=46  Identities=22%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+.. .++++||++++++.+.+...
T Consensus        63 ~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~  108 (322)
T 2ycf_A           63 ETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGN  108 (322)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTT
T ss_pred             HHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhcc
Confidence            34999999999999999999987655 89999999999998877643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.24  E-value=5.5e-05  Score=61.94  Aligned_cols=45  Identities=16%  Similarity=0.162  Sum_probs=36.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCc-----eeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPH-----CCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~-----~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|..++.++.|+|+++++++|.+...     .++++|||+++++.+.+..
T Consensus       128 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          128 AERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             HHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C
T ss_pred             HHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC
Confidence            48999999999999999999987655     6999999999999876654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=97.24  E-value=5.7e-05  Score=54.48  Aligned_cols=46  Identities=24%  Similarity=0.419  Sum_probs=42.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        60 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  105 (276)
T 2h6d_A           60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH  105 (276)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhcc
Confidence            4888999999999999999999999999999999999999888654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.23  E-value=4.4e-05  Score=56.49  Aligned_cols=46  Identities=20%  Similarity=0.376  Sum_probs=38.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCce------eEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHC------CLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~------~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....      ++++|||++|++.+.+...
T Consensus        74 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~  125 (323)
T 3qup_A           74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS  125 (323)
T ss_dssp             HHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhh
Confidence            389999999999999999999876554      8999999999999887643

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=97.22  E-value=9.8e-05  Score=55.13  Aligned_cols=45  Identities=13%  Similarity=0.228  Sum_probs=41.2

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhh
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDI   55 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~   55 (184)
                      .+.+ |+.++.++.|+|++++.+++.+.+..++++|||++|++.+.
T Consensus        89 ~~~~-E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X           89 DFKN-ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             HHHH-HHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             HHHH-HHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHH
Confidence            3444 99999999999999999999999999999999999999887

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.21  E-value=7.1e-05  Score=56.06  Aligned_cols=68  Identities=18%  Similarity=0.306  Sum_probs=48.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL   82 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (184)
                      .|+.++.++.|+|++++++++.+....++++|||.+ ++.+.+......+.......+......+..++
T Consensus        61 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  128 (346)
T 1ua2_A           61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL  128 (346)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999975 77777765443333333333333333333333

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=97.21  E-value=6.9e-05  Score=56.34  Aligned_cols=46  Identities=15%  Similarity=0.129  Sum_probs=40.8

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++..+ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        66 ~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  112 (345)
T 1xjd_A           66 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC  112 (345)
T ss_dssp             HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc
Confidence            477777776 8999999999999999999999999999999888753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=97.21  E-value=5.6e-05  Score=58.57  Aligned_cols=70  Identities=16%  Similarity=0.254  Sum_probs=50.2

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++.++ .|+|++++++++.+....++++|||. |++.+.+..............++.....+..+++
T Consensus        65 ~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH  135 (432)
T 3p23_A           65 DREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH  135 (432)
T ss_dssp             HHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH
Confidence            3489999999 79999999999999999999999996 6898888765543333222233434444444444

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.19  E-value=7.9e-05  Score=53.88  Aligned_cols=44  Identities=30%  Similarity=0.489  Sum_probs=39.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+. ..++++||++++++.+.+..
T Consensus        57 ~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           57 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT  100 (279)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHTTS
T ss_pred             HHHHHHHhCCCcCcceEEEEEcCC-CcEEEEecCCCCCHHHHHhc
Confidence            489999999999999999998754 58899999999999998864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=97.18  E-value=4.8e-05  Score=57.38  Aligned_cols=69  Identities=16%  Similarity=0.209  Sum_probs=48.7

Q ss_pred             hhhhhhhcCCCCcceeeccccCC----CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      ++..+..+.|+|+++++++|.+.    ...++++||| ++++.+.+......+.......+......+..+++.
T Consensus        98 e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~  170 (364)
T 3op5_A           98 KWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE  170 (364)
T ss_dssp             HHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45566778899999999999774    4479999999 999999887654344444444555555555555543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=97.18  E-value=6.5e-05  Score=56.55  Aligned_cols=46  Identities=22%  Similarity=0.215  Sum_probs=41.6

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus       107 ~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  153 (355)
T 1vzo_A          107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR  153 (355)
T ss_dssp             CHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHc
Confidence            388999999 6999999999999989999999999999999988754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.17  E-value=5.6e-05  Score=55.07  Aligned_cols=50  Identities=24%  Similarity=0.447  Sum_probs=39.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE   64 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~   64 (184)
                      .|+.++.++.|+|++++.+++.+ +..++++|||+++++.+.+......+.
T Consensus        69 ~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~  118 (289)
T 3og7_A           69 NEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFE  118 (289)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEEHHHHHTTC---CC
T ss_pred             HHHHHHHhCCCCcEEEEEeeccC-CccEEEEEecCCCcHHHHHhhccCCCC
Confidence            48999999999999999997654 558999999999999988865443333

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.17  E-value=0.00032  Score=50.39  Aligned_cols=48  Identities=25%  Similarity=0.574  Sum_probs=41.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ..|+.++.++.|+|++++.++|.+.+..++++||++++++.+.+.+..
T Consensus        54 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  101 (271)
T 3dtc_A           54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR  101 (271)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSSC
T ss_pred             HHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcCC
Confidence            348899999999999999999999999999999999999988876543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.15  E-value=6.6e-05  Score=55.19  Aligned_cols=47  Identities=28%  Similarity=0.614  Sum_probs=40.4

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCC-ceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~-~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++ .|+|++++.++|.+.+ ..++++|||++|++.+.+....
T Consensus        79 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred             HHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence            488899999 7899999999987754 4899999999999999887643

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.15  E-value=9.3e-05  Score=53.50  Aligned_cols=47  Identities=23%  Similarity=0.432  Sum_probs=39.6

Q ss_pred             hhhhhhhhhcCCCCcceeeccccC----------------CCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLD----------------PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~----------------~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+                ....++++|||+.+++.+.+...
T Consensus        52 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (284)
T 2a19_B           52 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR  114 (284)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred             HHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhc
Confidence            349999999999999999998754                34478999999999999988653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=97.15  E-value=9e-05  Score=54.45  Aligned_cols=45  Identities=18%  Similarity=0.411  Sum_probs=41.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||++.+++.+.+..
T Consensus        81 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A           81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH  125 (310)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHH
Confidence            489999999999999999999999999999999999999888764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.15  E-value=5.5e-05  Score=56.67  Aligned_cols=46  Identities=26%  Similarity=0.440  Sum_probs=40.6

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++..+.|+|++++.+++.+....++++||+ .|++.+.+...
T Consensus        57 ~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~  102 (336)
T 3h4j_B           57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEK  102 (336)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHc
Confidence            34899999999999999999999999999999999 78888776543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=97.14  E-value=7.2e-05  Score=54.39  Aligned_cols=46  Identities=22%  Similarity=0.288  Sum_probs=41.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        70 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  115 (287)
T 2wei_A           70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR  115 (287)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             HHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhc
Confidence            4899999999999999999999999999999999999998877543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=97.13  E-value=0.00012  Score=53.58  Aligned_cols=47  Identities=23%  Similarity=0.343  Sum_probs=42.5

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++.+++.+....++++||++++++.+.+...
T Consensus        68 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  114 (303)
T 3a7i_A           68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG  114 (303)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS
T ss_pred             HHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC
Confidence            34889999999999999999999999999999999999999988654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=97.13  E-value=7.7e-05  Score=55.48  Aligned_cols=50  Identities=22%  Similarity=0.500  Sum_probs=41.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE   64 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~   64 (184)
                      .|+.++.++.|+|+++++++|.+.. .+++++|++.|++.+.+......+.
T Consensus        66 ~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~  115 (327)
T 3lzb_A           66 DEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG  115 (327)
T ss_dssp             HHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCC
T ss_pred             HHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCC
Confidence            3899999999999999999998865 7888999999999998876443333

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.12  E-value=6.5e-05  Score=55.33  Aligned_cols=46  Identities=11%  Similarity=-0.014  Sum_probs=42.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++.|+|++++.+++.+.+..++++||++++++.+.+...
T Consensus        83 ~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  128 (309)
T 2h34_A           83 REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQ  128 (309)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHH
T ss_pred             HHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhc
Confidence            4889999999999999999999999999999999999999988754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.09  E-value=2.7e-05  Score=57.42  Aligned_cols=47  Identities=19%  Similarity=0.225  Sum_probs=39.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCc----eeEEeeecCCCchhhhhhhc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPH----CCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~----~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ..|+.++.++.|+|++++++++.+...    .++++|||+++++.+.+...
T Consensus        60 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~  110 (311)
T 3ork_A           60 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE  110 (311)
T ss_dssp             HHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc
Confidence            348899999999999999999866543    38999999999999988754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=97.09  E-value=6.8e-05  Score=54.16  Aligned_cols=46  Identities=20%  Similarity=0.526  Sum_probs=40.0

Q ss_pred             hhhhhhhhcCCCCcceeecccc--CCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACL--DPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~--~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.  +....++++||++++++.+.+...
T Consensus        54 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  101 (279)
T 2w5a_A           54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG  101 (279)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhh
Confidence            4899999999999999999884  356789999999999999988753

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.06  E-value=6.9e-05  Score=59.75  Aligned_cols=46  Identities=11%  Similarity=-0.000  Sum_probs=40.3

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      ..|+.++.++.|+|++++..++.+....++++|||+++++.+.+..
T Consensus       387 ~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          387 AREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED  432 (540)
T ss_dssp             HHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT
T ss_pred             HHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH
Confidence            4499999999999999777777777778999999999999998876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.05  E-value=0.00025  Score=51.60  Aligned_cols=70  Identities=13%  Similarity=0.034  Sum_probs=51.6

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++..+ .|+|++++.+++.+....++++||+ ++++.+.+......+.......+......+..+++
T Consensus        53 ~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  123 (298)
T 1csn_A           53 RDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH  123 (298)
T ss_dssp             HHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4489999999 7999999999999999999999999 99999998764433444334344444444444444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=97.02  E-value=5.4e-05  Score=54.77  Aligned_cols=46  Identities=30%  Similarity=0.517  Sum_probs=39.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-CceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+. +..++++||++++++.+.+...
T Consensus        63 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (278)
T 1byg_A           63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR  109 (278)
T ss_dssp             HTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence            389999999999999999997664 4689999999999999888653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=97.02  E-value=0.00035  Score=51.88  Aligned_cols=46  Identities=26%  Similarity=0.371  Sum_probs=39.1

Q ss_pred             hhhhhhh--cCCCCcceeeccccCCC----ceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKD--LHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~--l~h~n~~~~~g~~~~~~----~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      |.+++..  +.|+|++++++++.+..    ..++++||++.|++.+.+.+..
T Consensus        84 e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  135 (342)
T 1b6c_B           84 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT  135 (342)
T ss_dssp             HHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCC
T ss_pred             HHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccC
Confidence            6666666  79999999999998865    7899999999999999987643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.00  E-value=0.00012  Score=53.32  Aligned_cols=46  Identities=26%  Similarity=0.347  Sum_probs=39.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+    ....++++||++++++.+.+...
T Consensus        74 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  123 (290)
T 1t4h_A           74 EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF  123 (290)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc
Confidence            38999999999999999998754    35589999999999999988753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.99  E-value=0.00015  Score=54.62  Aligned_cols=46  Identities=13%  Similarity=0.071  Sum_probs=40.8

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++..+ .|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        69 ~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  115 (353)
T 2i0e_A           69 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV  115 (353)
T ss_dssp             HHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc
Confidence            477778877 7999999999999999999999999999999888753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.97  E-value=9.6e-05  Score=54.93  Aligned_cols=45  Identities=24%  Similarity=0.389  Sum_probs=40.3

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.++|.+....++++||++++++.+....
T Consensus        73 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  117 (331)
T 4aaa_A           73 REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF  117 (331)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHS
T ss_pred             HHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhh
Confidence            489999999999999999999999999999999998888776543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=96.97  E-value=0.00011  Score=55.02  Aligned_cols=67  Identities=16%  Similarity=0.124  Sum_probs=47.9

Q ss_pred             hhhhhhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ++..+..+.|+|++++.+++.+    ....++++||| ++++.+.+.... .+.......+......+..+++
T Consensus        98 e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH  168 (345)
T 2v62_A           98 KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH  168 (345)
T ss_dssp             HHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            6677888899999999999977    67899999999 999999887543 3333333344444444444444

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=96.96  E-value=0.00022  Score=52.52  Aligned_cols=82  Identities=20%  Similarity=0.121  Sum_probs=54.4

Q ss_pred             hhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          15 AFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        15 ~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      +...+.++ .|+|++++.++|.+....++++||| .+++.+.+......+++.....++.....+..+++.       ..
T Consensus       106 e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-------~~  177 (311)
T 3p1a_A          106 EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS-------QG  177 (311)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH-------TT
T ss_pred             HHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-------CC
Confidence            33344444 8999999999999999999999999 678888776654444444444455555555555543       23


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      +++..+++.++
T Consensus       178 ivH~Dikp~NI  188 (311)
T 3p1a_A          178 LVHLDVKPANI  188 (311)
T ss_dssp             EECCCCSGGGE
T ss_pred             EecCCCCHHHE
Confidence            55555665554

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=96.96  E-value=0.00016  Score=59.09  Aligned_cols=45  Identities=24%  Similarity=0.281  Sum_probs=40.2

Q ss_pred             hhhhhhhcCCCCcceeeccccC------CCceeEEeeecCCCchhhhhhhc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLD------PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~------~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |+.++.++.|+|++++.+++.+      ....++++|||++|++.+.+...
T Consensus        62 Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~  112 (676)
T 3qa8_A           62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF  112 (676)
T ss_dssp             HHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSS
T ss_pred             HHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhc
Confidence            8999999999999999999866      56789999999999999988753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=96.96  E-value=0.00066  Score=49.88  Aligned_cols=46  Identities=39%  Similarity=0.844  Sum_probs=40.0

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |.+ |+.++.++.|+|++++.++|.+.  .++++||+++|++.+.+...
T Consensus        48 ~~~-E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~   93 (307)
T 2eva_A           48 FIV-ELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGA   93 (307)
T ss_dssp             HHH-HHHHHHHCCCTTBCCEEEBCTTT--TEEEEECCTTCBHHHHHHCS
T ss_pred             HHH-HHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcCCCCCHHHHHhcc
Confidence            444 89999999999999999998753  68999999999999988754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.95  E-value=0.0021  Score=48.29  Aligned_cols=104  Identities=12%  Similarity=0.117  Sum_probs=66.8

Q ss_pred             hhhhcccceeeecceeeecCcEEEEeEee--ccch-hhhHHHHHHHHHHHcCCC--cchhhhheeeecC---CcEEEEEe
Q psy8884          72 MHDIVKFNGYLKTKELLKEGNKVAIKNLK--KSRI-DLTRPLLLELKRLKDLHH--DHLVKFIGACLDP---PHCCLLTE  143 (184)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~g~~vavK~l~--~~~~-~~~~~~~~e~~~l~~l~h--~ni~~l~~~~~~~---~~~~lv~e  143 (184)
                      +..|....+|...    ..+..+++|...  .... .....+.+|..+++.+..  ..+.+++..+.+.   +..+++||
T Consensus        46 l~~G~sn~~y~v~----~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           46 FKGGQSNPTFKLV----TPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             CCC-CCSCEEEEE----CSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             cCCcccceEEEEE----ECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            4445555566543    335678888876  4321 223457789999988863  4567777777665   34799999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |++|..+.+..   ...++..++..++.++++.|+..++
T Consensus       122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            99998764311   1236677888899999999987654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.94  E-value=0.00025  Score=53.57  Aligned_cols=46  Identities=22%  Similarity=0.348  Sum_probs=41.5

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++ .|+|++++.+++......++++||++++++.+.+...
T Consensus       148 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~  194 (365)
T 2y7j_A          148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK  194 (365)
T ss_dssp             HHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc
Confidence            488889999 7999999999999999999999999999999887653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=96.92  E-value=0.00016  Score=54.30  Aligned_cols=51  Identities=16%  Similarity=0.337  Sum_probs=39.5

Q ss_pred             hhhhhhhhcCCCCcceeeccccC-----CCceeEEeeecCCCchhhhhhhcccCccc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD-----PPHCCLLTEYCPKGSLQDILENEQFKLEP   65 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~-----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~   65 (184)
                      .|+.++.++.|+|++++.+++.+     ....++++|||. |++.+.+......+..
T Consensus        78 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~  133 (362)
T 3pg1_A           78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISP  133 (362)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCH
T ss_pred             HHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCH
Confidence            49999999999999999999843     345799999997 6787777654433333

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=96.92  E-value=0.00018  Score=52.85  Aligned_cols=45  Identities=18%  Similarity=0.442  Sum_probs=37.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC-----ceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP-----HCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~-----~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++.|+|++++.++|.+..     ..++++||++.|++.+.+..
T Consensus        85 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~  134 (313)
T 3brb_A           85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY  134 (313)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHH
T ss_pred             HHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHH
Confidence            3889999999999999999997754     35999999999999988743

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.91  E-value=0.00029  Score=52.24  Aligned_cols=46  Identities=28%  Similarity=0.520  Sum_probs=37.4

Q ss_pred             hhhhhhhcCCCCcceeeccccCC----CceeEEeeecCCCchhhhhhhcc
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~----~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      ++.....+.|+|++++.+++.+.    ...++++|||++|++.+.+....
T Consensus        81 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  130 (337)
T 3mdy_A           81 EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT  130 (337)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCC
T ss_pred             HHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccC
Confidence            33334445999999999999876    67899999999999999987653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=96.89  E-value=0.00014  Score=53.04  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=40.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.+.+..++++||+. +++.+.+...
T Consensus        51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~   95 (299)
T 2r3i_A           51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS   95 (299)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHT
T ss_pred             HHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhh
Confidence            38999999999999999999999999999999997 6888877654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=96.89  E-value=0.00028  Score=52.83  Aligned_cols=69  Identities=20%  Similarity=0.319  Sum_probs=45.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC--------CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP--------PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~--------~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.++|.+.        ...++++|||. |++.+.+......+.......+......+..+++
T Consensus        65 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH  141 (351)
T 3mi9_A           65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH  141 (351)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999998763        45789999997 4666665544333333333334443433344443

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=96.82  E-value=0.00017  Score=54.78  Aligned_cols=45  Identities=22%  Similarity=0.233  Sum_probs=37.6

Q ss_pred             hhhh-hhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          15 AFYK-LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        15 ~~~~-l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      |..+ +..+.|+|++++.+++.+....++++|||++|++.+.+...
T Consensus        88 e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  133 (373)
T 2r5t_A           88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE  133 (373)
T ss_dssp             ---CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc
Confidence            3444 56789999999999999999999999999999999888754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=96.81  E-value=0.00024  Score=55.08  Aligned_cols=46  Identities=24%  Similarity=0.270  Sum_probs=39.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|..++.++.|+|++++.++|.+.+..++++|||++|++.+.+...
T Consensus       197 ~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  242 (446)
T 4ejn_A          197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE  242 (446)
T ss_dssp             ----CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHH
T ss_pred             HHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhc
Confidence            3788899999999999999999999999999999999998888654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=96.81  E-value=0.00028  Score=51.65  Aligned_cols=46  Identities=11%  Similarity=0.163  Sum_probs=38.5

Q ss_pred             hhhhhh-hhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKL-KDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l-~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+ ..+.|+|++++.+++.+    ....++++|||++|++.+.+...
T Consensus        59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (299)
T 3m2w_A           59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR  109 (299)
T ss_dssp             HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHC
T ss_pred             HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhc
Confidence            477777 55589999999999876    56789999999999999988764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=96.81  E-value=0.00029  Score=54.50  Aligned_cols=46  Identities=17%  Similarity=0.322  Sum_probs=39.8

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++ .|+|++++.+++.+....++++|||. |++.+.+....
T Consensus        57 ~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~  103 (434)
T 2rio_A           57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKN  103 (434)
T ss_dssp             HHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC-
T ss_pred             HHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccC
Confidence            488889887 89999999999999999999999995 79999887643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.78  E-value=0.00016  Score=53.43  Aligned_cols=46  Identities=28%  Similarity=0.611  Sum_probs=39.9

Q ss_pred             hhhhhhhhc-CCCCcceeeccccC------CCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLD------PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~------~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++ .|+|++++.+++.+      ....++++|||+.|++.+.+...
T Consensus        69 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             HHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             HHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhc
Confidence            488899999 79999999999976      45689999999999999988753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=96.78  E-value=0.00023  Score=54.51  Aligned_cols=71  Identities=13%  Similarity=0.115  Sum_probs=46.6

Q ss_pred             hhhhhhhhh-cCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhcc-cCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKD-LHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~-l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      +.|+.++.+ ..|+|++++++++..    ....++++|||++|++.+.+.... ..+.......++.....+..|++
T Consensus       102 ~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A          102 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            347777644 489999999998754    456899999999999999887542 12333333344444444444444

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=96.77  E-value=0.00054  Score=49.88  Aligned_cols=67  Identities=22%  Similarity=0.284  Sum_probs=44.4

Q ss_pred             hhhhhhh--cCCCCcceeeccccCC----CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLKD--LHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~~--l~h~n~~~~~g~~~~~----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      +.+++..  +.|+|++++++++.+.    ...++++|||++|++.+.+....  ++......+......+..+++
T Consensus        50 e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           50 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             HHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCC--BCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcc--cCHHHHHHHHHHHHHHHHHHH
Confidence            4444444  8999999999997553    45789999999999999986543  333333334444444444444

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.75  E-value=0.0023  Score=45.39  Aligned_cols=90  Identities=14%  Similarity=0.008  Sum_probs=57.5

Q ss_pred             ccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcc--hhhhheeeecCCcEEEEEeecCCCCHHHHH
Q psy8884          77 KFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDH--LVKFIGACLDPPHCCLLTEYCPKGSLQDIL  154 (184)
Q Consensus        77 ~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n--i~~l~~~~~~~~~~~lv~e~~~~gsl~~~l  154 (184)
                      ...+|...   ...|..+++|......   ...+.+|...++.+.+.+  +.++++....++..+++|||++|.++.  .
T Consensus        33 ~~~v~~~~---~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~  104 (264)
T 1nd4_A           33 DAAVFRLS---AQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S  104 (264)
T ss_dssp             SCEEEEEE---CTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred             CceEEEEe---cCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence            34555542   2346679999976542   245678888888875444  455777777777789999999998874  2


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         155 ENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       155 ~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .    ..+.   ..++.++++.|+..+
T Consensus       105 ~----~~~~---~~~~~~l~~~l~~lh  124 (264)
T 1nd4_A          105 S----HLAP---AEKVSIMADAMRRLH  124 (264)
T ss_dssp             S----CCCH---HHHHHHHHHHHHHHT
T ss_pred             C----cCCH---hHHHHHHHHHHHHHh
Confidence            1    1122   245566666666544

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.72  E-value=0.00038  Score=52.25  Aligned_cols=83  Identities=23%  Similarity=0.320  Sum_probs=56.1

Q ss_pred             hhhhhhhhcC-----CCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc-Cccccccchhhhhhcccceeeeccee
Q psy8884          14 TAFYKLKDLH-----HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus        14 ~~~~~l~~l~-----h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      .|..++.++.     |+|++++.+++.+.+..++++||| ++++.+.+..... .+.......+......+..+++.   
T Consensus        80 ~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---  155 (360)
T 3llt_A           80 IEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---  155 (360)
T ss_dssp             HHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence            3777888886     999999999999999999999999 8999988876432 23322333334444444445443   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..+++..+++.++
T Consensus       156 ----~~ivHrDlkp~NI  168 (360)
T 3llt_A          156 ----MSLTHTDLKPENI  168 (360)
T ss_dssp             ----TTEECSCCSGGGE
T ss_pred             ----CCeeeCCCCcccE
Confidence                2355556665554

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=96.69  E-value=0.00041  Score=50.67  Aligned_cols=43  Identities=21%  Similarity=0.549  Sum_probs=33.9

Q ss_pred             hhhhhhhhcCCCCcceeeccc--cCCCceeEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGAC--LDPPHCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~--~~~~~~~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++.++.|+|++++.+++  .+....++++|||+.+ +.+.+.
T Consensus        55 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~   99 (305)
T 2wtk_C           55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD   99 (305)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHH
T ss_pred             HHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHH
Confidence            489999999999999999998  4456789999999876 555544

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=96.68  E-value=0.00068  Score=50.10  Aligned_cols=45  Identities=11%  Similarity=0.203  Sum_probs=39.2

Q ss_pred             hhhhhhhhcC-CCCcceeeccccC--CCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACLD--PPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~~--~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++. |+|++++.+++.+  ....++++||++++++.+.+..
T Consensus        79 ~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  126 (330)
T 3nsz_A           79 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT  126 (330)
T ss_dssp             HHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG
T ss_pred             HHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh
Confidence            4899999997 9999999999987  5678999999999999887653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.67  E-value=0.00058  Score=50.63  Aligned_cols=47  Identities=28%  Similarity=0.435  Sum_probs=35.8

Q ss_pred             hhhhhhhcCCCCcceeeccc-----cCCCceeEEeeecCCCchhhhhhhccc
Q psy8884          15 AFYKLKDLHHDHLVKFIGAC-----LDPPHCCLLTEYCPKGSLQDILENEQF   61 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~-----~~~~~~~~~~e~~~~~~l~~~l~~~~~   61 (184)
                      ++..+..+.|+|++++++.+     .+....++++|||++|++.+.+.....
T Consensus        57 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~  108 (336)
T 3g2f_A           57 NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS  108 (336)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCB
T ss_pred             HHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhccc
Confidence            44456678999999999743     223356899999999999999876543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.66  E-value=0.00065  Score=52.52  Aligned_cols=68  Identities=9%  Similarity=0.212  Sum_probs=46.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-----CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.+++.+.     ...++++|||. |++.+.+.... .+.......++.....+..+++
T Consensus        74 ~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH  146 (432)
T 3n9x_A           74 REITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH  146 (432)
T ss_dssp             HHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999776     56899999986 68888776542 2333233333333333343443

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=96.62  E-value=0.00075  Score=55.27  Aligned_cols=83  Identities=12%  Similarity=0.095  Sum_probs=55.4

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      .|..++..+ .|+|++.+.+++.+....++++|||++|++.+.+.... .+.......+......+..|++.       .
T Consensus       390 ~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~-------~  461 (674)
T 3pfq_A          390 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS-------K  461 (674)
T ss_dssp             HHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh-------C
Confidence            367777777 79999999999999999999999999999999887643 22222222333344444445443       2


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .+++..++++++
T Consensus       462 gIiHrDLKp~NI  473 (674)
T 3pfq_A          462 GIIYRDLKLDNV  473 (674)
T ss_dssp             SEECCCCCSTTE
T ss_pred             CeEeccCChhhE
Confidence            345555555544

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.60  E-value=0.00071  Score=50.18  Aligned_cols=45  Identities=11%  Similarity=0.145  Sum_probs=39.9

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+.++.++ .|+|++++.+++.+....++++|||++|++.+.+..
T Consensus        77 ~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  122 (327)
T 3lm5_A           77 HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP  122 (327)
T ss_dssp             HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSS
T ss_pred             HHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHH
Confidence            388888888 469999999999999999999999999999888754

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=96.60  E-value=0.0006  Score=51.75  Aligned_cols=43  Identities=21%  Similarity=0.409  Sum_probs=35.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC--------------------------------------CceeEEeeecCCCchhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP--------------------------------------PHCCLLTEYCPKGSLQDI   55 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~--------------------------------------~~~~~~~e~~~~~~l~~~   55 (184)
                      .|+.++..+.|+|++++.+++.+.                                      ...++++|||+ |++.+.
T Consensus        49 ~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~  127 (383)
T 3eb0_A           49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKV  127 (383)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHH
T ss_pred             HHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHH
Confidence            499999999999999999998442                                      33789999998 577666


Q ss_pred             hh
Q psy8884          56 LE   57 (184)
Q Consensus        56 l~   57 (184)
                      +.
T Consensus       128 l~  129 (383)
T 3eb0_A          128 LK  129 (383)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=96.55  E-value=9.6e-05  Score=55.05  Aligned_cols=45  Identities=9%  Similarity=0.068  Sum_probs=26.4

Q ss_pred             CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          37 PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        37 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ....++++|||+.|++.+.+.+..  ++......+......+..+++
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~~~--~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRTKL--SSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTTTC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCeEEEEEEecCCCccHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH
Confidence            678999999999997766664432  222233334444444444444

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.47  E-value=0.00064  Score=52.86  Aligned_cols=68  Identities=16%  Similarity=0.311  Sum_probs=45.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-----CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++++++...     ...++++||+ .+++.+.+.... .+.......++.....+..|++
T Consensus       101 ~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH  173 (458)
T 3rp9_A          101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH  173 (458)
T ss_dssp             HHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            399999999999999999999543     4689999998 577877776532 2333233333333333344444

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.38  E-value=0.0008  Score=50.85  Aligned_cols=45  Identities=13%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC------ceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP------HCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~------~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++....      ..++++||+ .+++.+.+...
T Consensus        73 ~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~  123 (367)
T 1cm8_A           73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE  123 (367)
T ss_dssp             HHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC
T ss_pred             HHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcC
Confidence            4899999999999999999987753      359999999 78888887654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=96.38  E-value=0.00063  Score=49.93  Aligned_cols=46  Identities=15%  Similarity=0.169  Sum_probs=36.3

Q ss_pred             hhhhhhhhc----CCCCcceeeccccCCCceeEEeee-cCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL----HHDHLVKFIGACLDPPHCCLLTEY-CPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l----~h~n~~~~~g~~~~~~~~~~~~e~-~~~~~l~~~l~~~   59 (184)
                      .|+.++.++    .|+|++++.+++.+....++++|+ +.++++.+.+...
T Consensus        83 ~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~  133 (312)
T 2iwi_A           83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK  133 (312)
T ss_dssp             HHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHH
T ss_pred             HHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc
Confidence            488899998    899999999999998889999999 7889999888754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.34  E-value=0.00075  Score=51.45  Aligned_cols=46  Identities=15%  Similarity=0.307  Sum_probs=39.7

Q ss_pred             hhhhhhhhcC--CCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLH--HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~--h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.  |+|++++.+++.+.+..++++| +.++++.+.+....
T Consensus       103 ~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~  150 (390)
T 2zmd_A          103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK  150 (390)
T ss_dssp             HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS
T ss_pred             HHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC
Confidence            4899999996  4999999999999999999999 67889988887643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.32  E-value=0.00067  Score=50.66  Aligned_cols=45  Identities=16%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             hhhhhhhhcCC--CCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHH--DHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h--~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|  +|++++.+++.+....++++| +.++++.+.+...
T Consensus        56 ~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~  102 (343)
T 3dbq_A           56 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK  102 (343)
T ss_dssp             HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHS
T ss_pred             HHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhc
Confidence            48999999987  899999999999999999999 5688998888764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.30  E-value=0.0013  Score=50.02  Aligned_cols=45  Identities=16%  Similarity=0.368  Sum_probs=37.1

Q ss_pred             hhhhhhhhcC-CCCcceeeccccCC--CceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACLDP--PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~~~--~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++. |+|++++++++...  ...++++|||. +++.+.+...
T Consensus        57 ~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  104 (388)
T 3oz6_A           57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN  104 (388)
T ss_dssp             HHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT
T ss_pred             HHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC
Confidence            3888899997 99999999998654  36899999997 6888777654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.29  E-value=0.00089  Score=49.07  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=37.3

Q ss_pred             hhhhhhhhcCCCCcceeecccc--------------CCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACL--------------DPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~--------------~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++.              +....++++||+. |++.+.+...
T Consensus        57 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  115 (320)
T 2i6l_A           57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG  115 (320)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC
T ss_pred             HHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcC
Confidence            4899999999999999988763              4466899999997 7888887654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=96.24  E-value=0.00076  Score=51.48  Aligned_cols=41  Identities=15%  Similarity=0.245  Sum_probs=33.2

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCc------eeEEeeecCCCchh
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPH------CCLLTEYCPKGSLQ   53 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~------~~~~~e~~~~~~l~   53 (184)
                      ..|+.++..+.|+|++++.+++.+...      .++++|||+.+...
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  126 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR  126 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHH
Confidence            349999999999999999999855432      78999999865443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.17  E-value=0.00033  Score=52.47  Aligned_cols=45  Identities=16%  Similarity=0.050  Sum_probs=37.1

Q ss_pred             hhhhhhhhcCCCCcce---------------eeccccC-CCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVK---------------FIGACLD-PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~---------------~~g~~~~-~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|+++               +.+++.+ ....++++||| +++|.+.+...
T Consensus        91 ~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A           91 NEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred             HHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence            4899999999999987               4555554 57789999999 99999998764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.17  E-value=0.0011  Score=48.03  Aligned_cols=43  Identities=16%  Similarity=0.206  Sum_probs=35.3

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      +...+..+.|+|++++.+++.+.+..++++|||+ |++.+.+..
T Consensus        56 ~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~   98 (290)
T 3fme_A           56 LDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQ   98 (290)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHH
T ss_pred             HHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHH
Confidence            3344777899999999999999999999999997 577666543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.17  E-value=0.0017  Score=48.43  Aligned_cols=45  Identities=11%  Similarity=0.283  Sum_probs=38.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-----CceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-----PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-----~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++...     ...++++||+. +++.+.+...
T Consensus        58 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  107 (353)
T 2b9h_A           58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ  107 (353)
T ss_dssp             HHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC
T ss_pred             HHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhc
Confidence            489999999999999999988764     66899999996 6888877654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=96.14  E-value=0.0011  Score=48.96  Aligned_cols=44  Identities=32%  Similarity=0.532  Sum_probs=35.6

Q ss_pred             hhhhhhhhcC-CCCcceeecccc--------CCCceeEEeeecCCCchhhhhhh
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACL--------DPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~--------~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|+..+.++. |+|++++.+++.        +....++++|||. |++.+.+..
T Consensus        74 ~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A           74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             HHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHH
T ss_pred             HHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHH
Confidence            4888899996 999999999983        3445799999995 788887754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=96.13  E-value=0.00076  Score=51.56  Aligned_cols=43  Identities=21%  Similarity=0.366  Sum_probs=36.0

Q ss_pred             hhhhhhhhcCCCCcceeecccc--CCCceeEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACL--DPPHCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~--~~~~~~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++.++.|+|++++.+++.  +....++++|||. |++.+.+.
T Consensus        67 ~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  111 (405)
T 3rgf_A           67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIK  111 (405)
T ss_dssp             HHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHH
T ss_pred             HHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHH
Confidence            4999999999999999999994  4678999999996 56666554

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.10  E-value=0.0012  Score=48.60  Aligned_cols=45  Identities=20%  Similarity=0.341  Sum_probs=36.4

Q ss_pred             hhhhhhhhc---CCCCcceeecccc-----CCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL---HHDHLVKFIGACL-----DPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l---~h~n~~~~~g~~~-----~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++..+   .|+|++++.++|.     +....++++||+. |++.+.+...
T Consensus        60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  112 (326)
T 1blx_A           60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKV  112 (326)
T ss_dssp             HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHS
T ss_pred             HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhc
Confidence            377777666   8999999999987     5567899999997 6888877653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.07  E-value=0.0019  Score=46.82  Aligned_cols=70  Identities=14%  Similarity=0.070  Sum_probs=46.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccc-cCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGAC-LDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|..++..+.|++++..++.| .+....++++||+ ++++.+.+......+.......+......+..+++
T Consensus        52 ~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  122 (296)
T 4hgt_A           52 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH  122 (296)
T ss_dssp             HHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3489999999988877777666 5566789999999 99999988744333433333344444444444443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=96.00  E-value=0.0013  Score=49.61  Aligned_cols=43  Identities=9%  Similarity=0.281  Sum_probs=35.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC------ceeEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP------HCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~------~~~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++..+.|+|++++.+++.+..      ..++++|||. |++.+.+.
T Consensus        73 ~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  121 (371)
T 2xrw_A           73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ  121 (371)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH
T ss_pred             HHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHh
Confidence            4889999999999999999987654      6799999997 46666654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=95.99  E-value=0.0023  Score=46.42  Aligned_cols=70  Identities=14%  Similarity=0.070  Sum_probs=45.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccc-cCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGAC-LDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..|+.++..+.|++++..++.| .+....++++||+ .+++.+.+......++......+......+..+++
T Consensus        52 ~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH  122 (296)
T 3uzp_A           52 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH  122 (296)
T ss_dssp             HHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3489999999998877666666 4566779999999 89999988743333333333333333333333443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=95.85  E-value=0.0016  Score=47.64  Aligned_cols=46  Identities=20%  Similarity=0.373  Sum_probs=36.1

Q ss_pred             hhhhhhhhcC---CCCcceeeccccCCC-----ceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLH---HDHLVKFIGACLDPP-----HCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~---h~n~~~~~g~~~~~~-----~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+..+.++.   |+|+++++++|.+..     ..++++||+. +++.+.+....
T Consensus        60 ~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~  113 (308)
T 3g33_A           60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAP  113 (308)
T ss_dssp             HHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCC
T ss_pred             HHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhcc
Confidence            3777766665   999999999997754     4789999996 68888876543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=95.75  E-value=0.0031  Score=47.44  Aligned_cols=46  Identities=11%  Similarity=0.261  Sum_probs=38.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-----CceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-----PHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-----~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|++++.+++...     ...++++||+. |++.+.+....
T Consensus        74 ~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~~  124 (364)
T 3qyz_A           74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH  124 (364)
T ss_dssp             HHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHCC
T ss_pred             HHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhCC
Confidence            489999999999999999998664     36899999996 68888776543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=95.74  E-value=0.0016  Score=48.67  Aligned_cols=43  Identities=16%  Similarity=0.371  Sum_probs=35.8

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCc------eeEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPH------CCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~------~~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++.++.|+|++++.+++.+...      .++++||+. +++.+.+.
T Consensus        72 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A           72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT
T ss_pred             HHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhc
Confidence            38889999999999999999987654      499999997 67776654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=95.74  E-value=0.0016  Score=49.20  Aligned_cols=43  Identities=16%  Similarity=0.366  Sum_probs=36.1

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCce------eEEeeecCCCchhhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHC------CLLTEYCPKGSLQDILE   57 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~------~~~~e~~~~~~l~~~l~   57 (184)
                      .|+.++.++.|+|++++.+++.+....      ++++||+. +++.+.+.
T Consensus        90 ~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A           90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT
T ss_pred             HHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh
Confidence            488999999999999999999887654      99999997 67766653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=95.64  E-value=0.0022  Score=49.41  Aligned_cols=43  Identities=14%  Similarity=0.261  Sum_probs=32.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCC------CceeEEeeecCCCchhhhh
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDP------PHCCLLTEYCPKGSLQDIL   56 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~------~~~~~~~e~~~~~~l~~~l   56 (184)
                      ..|+.++.++.|+|++++.++|.+.      ...++++||++. .+.+.+
T Consensus        95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  143 (420)
T 1j1b_A           95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA  143 (420)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHH
T ss_pred             HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHH
Confidence            3499999999999999999988442      236789999975 444443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.57  E-value=0.034  Score=39.70  Aligned_cols=84  Identities=19%  Similarity=0.085  Sum_probs=56.6

Q ss_pred             cCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHH
Q psy8884          90 EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNS  168 (184)
Q Consensus        90 ~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~  168 (184)
                      .+..+.+|.-....   ...+.+|...++.+. +-.+.+.+..+.+++..+++||+++|.++.+......     .....
T Consensus        49 ~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~-----~~~~~  120 (272)
T 4gkh_A           49 NAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYP-----DSGEN  120 (272)
T ss_dssp             TCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHCG-----GGHHH
T ss_pred             CCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCCH-----HHHHH
Confidence            35578888866542   345778888887764 3335667777888888999999999988887664321     22334


Q ss_pred             HHHHHHHHhhhcc
Q psy8884         169 LMNKAAFNRVLRI  181 (184)
Q Consensus       169 i~~qi~~gl~~~~  181 (184)
                      ++.++++.|+..+
T Consensus       121 ~~~~l~~~L~~Lh  133 (272)
T 4gkh_A          121 IVDALAVFLRRLH  133 (272)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            5666666666544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=95.54  E-value=0.0023  Score=47.21  Aligned_cols=46  Identities=17%  Similarity=0.238  Sum_probs=38.7

Q ss_pred             hhhhhhhhcCCCC------cceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          14 TAFYKLKDLHHDH------LVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        14 ~~~~~l~~l~h~n------~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .|+.++.++.|+|      ++++.+++.+.+..++++||| .+++.+.+....
T Consensus        60 ~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~  111 (339)
T 1z57_A           60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENG  111 (339)
T ss_dssp             HHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT
T ss_pred             HHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcC
Confidence            4788888887765      899999999999999999999 889988877543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=95.53  E-value=0.0025  Score=47.41  Aligned_cols=41  Identities=12%  Similarity=0.157  Sum_probs=34.3

Q ss_pred             hhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhc
Q psy8884          19 LKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        19 l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      +..+.|+|++++.+++..    ....++++|||++|++.+.+...
T Consensus        76 ~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~  120 (336)
T 3fhr_A           76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER  120 (336)
T ss_dssp             HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC
T ss_pred             HHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhc
Confidence            566789999999999865    34478999999999999988764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=95.53  E-value=0.00095  Score=50.52  Aligned_cols=45  Identities=16%  Similarity=0.083  Sum_probs=33.7

Q ss_pred             hhh---hhhhhcCCCCcceeeccccC-------CC-----------------ceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAF---YKLKDLHHDHLVKFIGACLD-------PP-----------------HCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~---~~l~~l~h~n~~~~~g~~~~-------~~-----------------~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+   ..++++.|+|++++.+.+.+       .+                 ..++++||| .|++.+.+...
T Consensus       122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~  193 (377)
T 3byv_A          122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  193 (377)
T ss_dssp             HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH
T ss_pred             HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc
Confidence            377   66777789999999855442       21                 278999999 68999888753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=95.51  E-value=0.0017  Score=50.73  Aligned_cols=42  Identities=12%  Similarity=0.282  Sum_probs=33.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC------ceeEEeeecCCCchhhhh
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP------HCCLLTEYCPKGSLQDIL   56 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~------~~~~~~e~~~~~~l~~~l   56 (184)
                      .|+.++..+.|+|++++++++.+..      ..++++|||..+ +.+.+
T Consensus       110 ~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~  157 (464)
T 3ttj_A          110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVI  157 (464)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHH
T ss_pred             HHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHH
Confidence            3888999999999999999996643      469999999764 44444

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=95.45  E-value=0.0023  Score=48.33  Aligned_cols=45  Identities=16%  Similarity=0.339  Sum_probs=33.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC------CceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP------PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~------~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++.|+|++++.+++...      ...++++|++ .+++.+.+...
T Consensus        77 ~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~  127 (367)
T 2fst_X           77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ  127 (367)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----C
T ss_pred             HHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC
Confidence            389999999999999999998664      5579999998 67887777653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.36  E-value=0.0029  Score=46.36  Aligned_cols=40  Identities=13%  Similarity=0.165  Sum_probs=31.9

Q ss_pred             hhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhh
Q psy8884          17 YKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE   57 (184)
Q Consensus        17 ~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~   57 (184)
                      ..+..+.|+|++++.+++.+.+..++++||+ .+.+.....
T Consensus        76 ~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~  115 (318)
T 2dyl_A           76 VVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKK  115 (318)
T ss_dssp             HHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHH
T ss_pred             HHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHH
Confidence            4567789999999999999999999999999 444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	184
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-13
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-09
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-12
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-11
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-11
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-10
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-09
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	0.001
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.003
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-04

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 63.5 bits (154), Expect = 5e-13
 Identities = 16/76 (21%), Positives = 26/76 (34%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
              G     K +          +  E+  +  LHH  L+    A  D     L+ E+   
Sbjct: 51  KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 110

Query: 148 GSLQDILENEQFKLEP 163
           G L D +  E +K+  
Sbjct: 111 GELFDRIAAEDYKMSE 126

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 52.0 bits (124), Expect = 5e-09
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +  LHH  L+    A  D     L+ E+   G L D +  E +K+      + M    + 
Sbjct: 80  MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 139

Query: 79  NGYL 82
             ++
Sbjct: 140 LKHM 143

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 8e-13
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
            +    VAIK +K+  +      + E K + +L H+ LV+  G C       ++TEY   
Sbjct: 25  WRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 83

Query: 148 GSLQDILENEQFKLEPMFKNSLM 170
           G L + L   + + +      + 
Sbjct: 84  GCLLNYLREMRHRFQTQQLLEMC 106

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 14/136 (10%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           + +L H+ LV+  G C       ++TEY   G L + L   + + +      +  D+ + 
Sbjct: 53  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 112

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRL---KDLHHDHLVKFIGACLD- 134
             YL       E  +   ++L      +    ++++      + +  D     +G+    
Sbjct: 113 MEYL-------ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 165

Query: 135 ---PPHCCLLTEYCPK 147
              PP   + +++  K
Sbjct: 166 RWSPPEVLMYSKFSSK 181

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 2e-12
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
               +KVAIK +++  +      + E + +  L H  LV+  G CL+    CL+ E+   
Sbjct: 26  WLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 84

Query: 148 GSLQDILENEQFKLEPMFKNSLMNKAA 174
           G L D L  ++          +     
Sbjct: 85  GCLSDYLRTQRGLFAAETLLGMCLDVC 111

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           +  L H  LV+  G CL+    CL+ E+   G L D L  ++          +  D+ +
Sbjct: 54  MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.9 bits (147), Expect = 5e-12
 Identities = 16/76 (21%), Positives = 28/76 (36%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
              GN  A K +          +  E++ +  L H  LV    A  D     ++ E+   
Sbjct: 48  RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 107

Query: 148 GSLQDILENEQFKLEP 163
           G L + + +E  K+  
Sbjct: 108 GELFEKVADEHNKMSE 123

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           +  L H  LV    A  D     ++ E+   G L + + +E  K+        M  + K
Sbjct: 77  MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 135

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 9e-12
 Identities = 13/75 (17%), Positives = 34/75 (45%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           +  G +VAI+ +   +      ++ E+  +++  + ++V ++ + L      ++ EY   
Sbjct: 42  VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101

Query: 148 GSLQDILENEQFKLE 162
           GSL D++        
Sbjct: 102 GSLTDVVTETCMDEG 116

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 8/46 (17%), Positives = 21/46 (45%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLE 64
           +++  + ++V ++ + L      ++ EY   GSL D++        
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG 116

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
            +    VAIK + K  ++     +  E+  L  + H ++V          H  L+ +   
Sbjct: 31  KRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 90

Query: 147 KGSLQDILENEQFKLEPMFKN 167
            G L D +  + F  E     
Sbjct: 91  GGELFDRIVEKGFYTERDASR 111

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L  + H ++V          H  L+ +    G L D +  + F  E      L+  ++  
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-LIFQVLDA 119

Query: 79  NGYL 82
             YL
Sbjct: 120 VKYL 123

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 4e-11
 Identities = 13/78 (16%), Positives = 31/78 (39%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
           +  +     A K +     +     ++E+  L    H ++VK + A     +  +L E+C
Sbjct: 32  QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91

Query: 146 PKGSLQDILENEQFKLEP 163
             G++  ++   +  L  
Sbjct: 92  AGGAVDAVMLELERPLTE 109

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L    H ++VK + A     +  +L E+C  G++  ++   +  L       +    +  
Sbjct: 63  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 122

Query: 79  NGYL 82
             YL
Sbjct: 123 LNYL 126

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 5e-11
 Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
                    K +K    D    +  E+  L    H +++    +        ++ E+   
Sbjct: 27  TSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85

Query: 148 GSLQDILENEQFKLEP 163
             + + +    F+L  
Sbjct: 86  LDIFERINTSAFELNE 101

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 5e-08
 Identities = 8/64 (12%), Positives = 23/64 (35%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L    H +++    +        ++ E+     + + +    F+L      S +H + + 
Sbjct: 55  LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEA 114

Query: 79  NGYL 82
             +L
Sbjct: 115 LQFL 118

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 6e-11
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGS 149
           GNKVA+K +K       +  L E   +  L H +LV+ +G  ++      ++TEY  KGS
Sbjct: 30  GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 87

Query: 150 LQDILENEQFKLEP 163
           L D L +    +  
Sbjct: 88  LVDYLRSRGRSVLG 101

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQFKLEP 65
           +  L H +LV+ +G  ++      ++TEY  KGSL D L +    +  
Sbjct: 54  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG 101

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 9e-11
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 89  KEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
           K    VA+K L  +       +    E+  L+   H +++ F+G     P   ++T++C 
Sbjct: 28  KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCE 86

Query: 147 KGSLQDILENEQFKLEP 163
             SL   L   + K E 
Sbjct: 87  GSSLYHHLHIIETKFEM 103

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L+   H +++ F+G     P   ++T++C   SL   L   + K E +    +     + 
Sbjct: 58  LRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116

Query: 79  NGYLKTK 85
             YL  K
Sbjct: 117 MDYLHAK 123

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
                G  +A K +        R  ++ EL+ L + +  ++V F GA        +  E+
Sbjct: 26  SHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85

Query: 145 CPKGSLQDILENEQ 158
              GSL  +L+   
Sbjct: 86  MDGGSLDQVLKKAG 99

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L + +  ++V F GA        +  E+   GSL  +L+      E +    +   ++K 
Sbjct: 58  LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSIAVIKG 116

Query: 79  NGYLKTK 85
             YL+ K
Sbjct: 117 LTYLREK 123

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
                KVA+K+LK+  +      L E   +K L H  LV+        P   ++TEY   
Sbjct: 34  YNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMEN 91

Query: 148 GSLQDILENEQFKLEPMFK 166
           GSL D L+        + K
Sbjct: 92  GSLVDFLKTPSGIKLTINK 110

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 9e-06
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL-ENEQFKLEPMFKNSLMHDIVK 77
           +K L H  LV+        P   ++TEY   GSL D L      KL       +   I +
Sbjct: 62  MKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120

Query: 78  FNGYL 82
              ++
Sbjct: 121 GMAFI 125

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 3e-10
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDL-HHDHLVKFIGACLDP 135
                           VA+K LK S     R  L+ ELK L  L +H ++V  +GAC   
Sbjct: 40  VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99

Query: 136 PHCCLLTEYCPKGSLQDILENEQ 158
               ++TEYC  G L + L  ++
Sbjct: 100 GPTLVITEYCCYGDLLNFLRRKR 122

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 6e-06
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 17/77 (22%)

Query: 23  HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL-----------------ENEQFKLEP 65
           +H ++V  +GAC       ++TEYC  G L + L                 E+++  L+ 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 66  MFKNSLMHDIVKFNGYL 82
               S  + + K   +L
Sbjct: 145 EDLLSFSYQVAKGMAFL 161

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 4e-10
 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 88  LKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           ++    VAIK +  S     +  + ++ E++ L+ L H + +++ G  L      L+ EY
Sbjct: 37  VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96

Query: 145 CPKGSLQDILENEQ 158
           C   +   +  +++
Sbjct: 97  CLGSASDLLEVHKK 110

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 19/96 (19%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L+ L H + +++ G  L      L+ EYC   +   +  +++  L+ +   ++ H  ++ 
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQG 127

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLEL 114
             YL         + +  +++K   I L+ P L++L
Sbjct: 128 LAYL-------HSHNMIHRDVKAGNILLSEPGLVKL 156

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.1 bits (132), Expect = 5e-10
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              K    VA+K LK+  +++    L E   +K++ H +LV+ +G C   P   ++TE+ 
Sbjct: 37  VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 95

Query: 146 PKGSLQDILENEQFKLEP 163
             G+L D L     +   
Sbjct: 96  TYGNLLDYLRECNRQEVS 113

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 15/137 (10%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDIL-ENEQFKLEPMFKNSLMHDIVK 77
           +K++ H +LV+ +G C   P   ++TE+   G+L D L E  + ++  +    +   I  
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 126

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLT---RPLLLELKRLKDLHHDHLVKFIGACLD 134
              YL+ K           ++L      +       + +    + +  D      GA   
Sbjct: 127 AMEYLEKK-------NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179

Query: 135 P----PHCCLLTEYCPK 147
                P      ++  K
Sbjct: 180 IKWTAPESLAYNKFSIK 196

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 5e-10
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDL-HHDHLVKFIGACLDP 135
            N             +VA+K LK+      R  L+ ELK +  L  H+++V  +GAC   
Sbjct: 54  MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113

Query: 136 PHCCLLTEYCPKGSLQDILENEQFKL 161
               L+ EYC  G L + L +++ K 
Sbjct: 114 GPIYLIFEYCCYGDLLNYLRSKREKF 139

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 22  LHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKL---EPMFKNSLMHDIVKF 78
             H+++V  +GAC       L+ EYC  G L + L +++ K    E  ++N    +  + 
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 79  NGYLKTKELLK 89
              L  ++LL 
Sbjct: 158 LNVLTFEDLLC 168

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.9 bits (131), Expect = 6e-10
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 1/107 (0%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKK-SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP 136
           F          +    VA+K LK+ +  D+      E   + +  + ++VK +G C    
Sbjct: 30  FQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 89

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHP 183
             CLL EY   G L + L +          +S ++  A        P
Sbjct: 90  PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 18/129 (13%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           + +  + ++VK +G C      CLL EY   G L + L +          +S +    + 
Sbjct: 70  MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 129

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC 138
           +                        +     L +  +    + +    KF+   L   +C
Sbjct: 130 SSPGPPP------------------LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC 171

Query: 139 CLLTEYCPK 147
            +      K
Sbjct: 172 LVGENMVVK 180

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 6e-10
 Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPP 136
           + G  K     +   +VAIK + ++     R   L E   +K+ +  H+V+ +G      
Sbjct: 37  YEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 96

Query: 137 HCCLLTEYCPKGSLQDILENEQFKLEPM 164
              ++ E   +G L+  L + +  +   
Sbjct: 97  PTLVIMELMTRGDLKSYLRSLRPAMANN 124

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 8/48 (16%), Positives = 21/48 (43%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPM 66
           +K+ +  H+V+ +G         ++ E   +G L+  L + +  +   
Sbjct: 77  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 1e-09
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 81  YLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC 139
                 + K+   VAIK LK+      T  ++ E + +  L + ++V+ IG C       
Sbjct: 26  RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 84

Query: 140 LLTEYCPKGSLQDILENEQFKL 161
           L+ E    G L   L  ++ ++
Sbjct: 85  LVMEMAGGGPLHKFLVGKREEI 106

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 8/90 (8%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +  L + ++V+ IG C       L+ E    G L   L  ++ ++       L+H +   
Sbjct: 63  MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 121

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLTR 108
             YL       E      ++L    + L  
Sbjct: 122 MKYL-------EEKNFVHRDLAARNVLLVN 144

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 86  ELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT 142
              +    +A+K L K+++    +   L  E++    L H ++++  G   D     L+ 
Sbjct: 26  REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85

Query: 143 EYCPKGSLQDILEN 156
           EY P G++   L+ 
Sbjct: 86  EYAPLGTVYRELQK 99

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
              L H ++++  G   D     L+ EY P G++   L+    K +     + + ++   
Sbjct: 60  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANA 118

Query: 79  NGYL 82
             Y 
Sbjct: 119 LSYC 122

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 16/74 (21%), Positives = 22/74 (29%), Gaps = 3/74 (4%)

Query: 88  LKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
           L    + AIK L+K  I   +    +  E   +  L H   VK      D         Y
Sbjct: 30  LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 89

Query: 145 CPKGSLQDILENEQ 158
              G L   +    
Sbjct: 90  AKNGELLKYIRKIG 103

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 8/42 (19%), Positives = 10/42 (23%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ 60
           +  L H   VK      D         Y   G L   +    
Sbjct: 62  MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 91  GNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP----PHCCLLTEYCP 146
           G +VA+K               E+ +   L H++++ FI A            L+++Y  
Sbjct: 26  GEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84

Query: 147 KGSLQDILENEQFKLEPMFK 166
            GSL D L      +E M K
Sbjct: 85  HGSLFDYLNRYTVTVEGMIK 104

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 5e-07
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 8   RQVFVPTAFYKLKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKL 63
           R  F     Y+   L H++++ FI A            L+++Y   GSL D L      +
Sbjct: 40  RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV 99

Query: 64  EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAI-KNLKKSRIDLTR 108
           E M K  L         +L  + +  +G      ++LK   I + +
Sbjct: 100 EGMIK--LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 143

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 3e-09
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRP------LLLELKRLKDLHHDHLVKFIGACLDPPHCCLL 141
              G + A K +KK R   +R       +  E+  LK++ H +++       +     L+
Sbjct: 32  KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 91

Query: 142 TEYCPKGSLQDILENEQFKLEPM 164
            E    G L D L  ++   E  
Sbjct: 92  LELVAGGELFDFLAEKESLTEEE 114

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 3e-05
 Identities = 11/55 (20%), Positives = 20/55 (36%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMH 73
           LK++ H +++       +     L+ E    G L D L  ++   E      L  
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.8 bits (126), Expect = 3e-09
 Identities = 16/84 (19%), Positives = 23/84 (27%), Gaps = 6/84 (7%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLL------ELKRLKDLHHDHLVKFIGACLDPPHCC 139
                G   A+K L K RI + +   L       L  +       +V    A   P    
Sbjct: 24  RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83

Query: 140 LLTEYCPKGSLQDILENEQFKLEP 163
            + +    G L   L       E 
Sbjct: 84  FILDLMNGGDLHYHLSQHGVFSEA 107

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 1/64 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +       +V    A   P     + +    G L   L       E   +     +I+  
Sbjct: 61  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 119

Query: 79  NGYL 82
             ++
Sbjct: 120 LEHM 123

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 81  YLKTKELLKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC 138
                ++ K    VA+K LK    D  L   LL E   ++ L + ++V+ IG C +    
Sbjct: 24  KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 82

Query: 139 CLLTEYCPKGSLQDILENEQ 158
            L+ E    G L   L+  +
Sbjct: 83  MLVMEMAELGPLNKYLQQNR 102

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 6e-05
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           ++ L + ++V+ IG C +     L+ E    G L   L+  +   +      L+H +   
Sbjct: 62  MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE-LVHQVSMG 119

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLT 107
             YL       E +    ++L    + L 
Sbjct: 120 MKYL-------EESNFVHRDLAARNVLLV 141

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 6e-09
 Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 88  LKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPP--HCCLLTE 143
             +G  +  K L    +     + L+ E+  L++L H ++V++    +D       ++ E
Sbjct: 26  KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 85

Query: 144 YCPKGSLQDILENEQFKLEPM 164
           YC  G L  ++     + + +
Sbjct: 86  YCEGGDLASVITKGTKERQYL 106

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 19  LKDLHHDHLVKFIGACLDPP--HCCLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMH 73
           L++L H ++V++    +D       ++ EYC  G L  ++     E+  L+  F   +M 
Sbjct: 57  LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 116

Query: 74  DIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLT 107
            +         +     G+ V  ++LK + + L 
Sbjct: 117 QLTLALKECHRRS--DGGHTVLHRDLKPANVFLD 148

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-09
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 88  LKEGNKVAIKNLKKSR-IDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCP 146
                 VA+K +   R +D    +  E+   K L+H+++VKF G   +     L  EYC 
Sbjct: 27  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 86

Query: 147 KGSLQDILENEQFKLEPMFKN 167
            G L D +E +    EP  + 
Sbjct: 87  GGELFDRIEPDIGMPEPDAQR 107

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 6e-05
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
            K L+H+++VKF G   +     L  EYC  G L D +E +    EP  +    H ++  
Sbjct: 57  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-FFHQLMAG 115

Query: 79  NGYL 82
             YL
Sbjct: 116 VVYL 119

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 1e-08
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 93  KVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSL 150
             AIK +K+    D  R    EL+ L  L HH +++  +GAC    +  L  EY P G+L
Sbjct: 39  DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 98

Query: 151 QDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH 182
            D L   +  + +P F  +    +  +    +H
Sbjct: 99  LDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 23  HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF 61
           HH +++  +GAC    +  L  EY P G+L D L   + 
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 107

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 4/77 (5%)

Query: 86  ELLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL 141
           E  K     AIK LKK  +    D+   ++ +        H  L           +   +
Sbjct: 22  EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81

Query: 142 TEYCPKGSLQDILENEQ 158
            EY   G L   +++  
Sbjct: 82  MEYLNGGDLMYHIQSCH 98

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 3e-05
 Identities = 17/127 (13%), Positives = 36/127 (28%), Gaps = 3/127 (2%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
                H  L           +   + EY   G L   +++   K +         +I+  
Sbjct: 57  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILG 115

Query: 79  NGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC 138
             +L +K ++    K+   N+   +    +     + +   L       F G        
Sbjct: 116 LQFLHSKGIVYRDLKLD--NILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPE 173

Query: 139 CLLTEYC 145
            LL +  
Sbjct: 174 ILLGQKY 180

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 85  KELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL 141
                +   VA+K LK   +   +     + E+  +  L H +L++  G  L PP   ++
Sbjct: 30  DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMV 88

Query: 142 TEYCPKGSLQDILENEQFKLEP 163
           TE  P GSL D L   Q     
Sbjct: 89  TELAPLGSLLDRLRKHQGHFLL 110

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           +  L H +L++  G  L PP   ++TE  P GSL D L   Q        +     + +
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 85  KELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLT 142
           K+      KVA+K LK    +     L+ E++ +K +  H +++  +GAC       ++ 
Sbjct: 39  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 98

Query: 143 EYCPKGSLQDILENEQFKLEPMFKNSLMNK 172
           EY  KG+L++ L+  +        N   N 
Sbjct: 99  EYASKGNLREYLQARRPPGLEYSYNPSHNP 128

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 11/57 (19%), Positives = 25/57 (43%)

Query: 23  HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFN 79
            H +++  +GAC       ++ EY  KG+L++ L+  +        N   +   + +
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 85  KELLKEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTE 143
                    VAIK  K    D  R   L E   ++   H H+VK IG   +     ++ E
Sbjct: 29  MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME 87

Query: 144 YCPKGSLQDILENEQFKLEP 163
            C  G L+  L+  ++ L+ 
Sbjct: 88  LCTLGELRSFLQVRKYSLDL 107

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVK 77
           ++   H H+VK IG   +     ++ E C  G L+  L+  ++ L+        + +  
Sbjct: 62  MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.7 bits (118), Expect = 3e-08
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 88  LKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDP----PHCCL 140
           L+    VA+K L+               E +    L+H  +V             P   +
Sbjct: 29  LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88

Query: 141 LTEYCPKGSLQDILEN 156
           + EY    +L+DI+  
Sbjct: 89  VMEYVDGVTLRDIVHT 104

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 19  LKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHD 74
              L+H  +V             P   ++ EY    +L+DI+  E   + P     ++ D
Sbjct: 61  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIAD 119

Query: 75  IVKFNGYLKTKELLK 89
             +   +     ++ 
Sbjct: 120 ACQALNFSHQNGIIH 134

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 4e-08
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
                +VAIK LK   +      L E + +K L H+ LV+            ++TEY  K
Sbjct: 38  WNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSK 95

Query: 148 GSLQDILENEQFK 160
           GSL D L+ E  K
Sbjct: 96  GSLLDFLKGETGK 108

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 7e-08
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLT--RPLLLELKRLKDLHHDHLVKFIGACLDP----PHCC 139
              +   +VA   L+  ++  +  +    E + LK L H ++V+F  +            
Sbjct: 29  LDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 88

Query: 140 LLTEYCPKGSLQDILENEQ 158
           L+TE    G+L+  L+  +
Sbjct: 89  LVTELMTSGTLKTYLKRFK 107

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 19  LKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHD 74
           LK L H ++V+F  +            L+TE    G+L+  L+  +     + + S    
Sbjct: 62  LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLR-SWCRQ 120

Query: 75  IVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRP 109
           I+K   +L T+        +  ++LK   I +T P
Sbjct: 121 ILKGLQFLHTR-----TPPIIHRDLKCDNIFITGP 150

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 85  KELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE 143
           K   K    VAIK LK        R  L E   +    H +++   G         ++TE
Sbjct: 48  KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE 107

Query: 144 YCPKGSLQDI 153
           +   GSL   
Sbjct: 108 FMENGSLDSF 117

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (93), Expect = 6e-05
 Identities = 11/64 (17%), Positives = 22/64 (34%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +    H +++   G         ++TE+   GSL   L     +   +    ++  I   
Sbjct: 81  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140

Query: 79  NGYL 82
             YL
Sbjct: 141 MKYL 144

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 89  KEGNKVAIKNLKK-SRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-HCCLLTEYCP 146
            +    A+K+L + + I      L E   +KD  H +++  +G CL       ++  Y  
Sbjct: 53  GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112

Query: 147 KGSLQDILENEQFKLEPM 164
            G L++ + NE       
Sbjct: 113 HGDLRNFIRNETHNPTVK 130

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 3e-04
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPP-HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHD 74
           +KD  H +++  +G CL       ++  Y   G L++ + NE               
Sbjct: 82  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 5/86 (5%)

Query: 86  ELLKEGNKVAIKNLKKSRI-----DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL 140
                   VAIK +K          + R  L E+K L++L H +++  + A     +  L
Sbjct: 18  RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 77

Query: 141 LTEYCPKGSLQDILENEQFKLEPMFK 166
           + ++        I +N         K
Sbjct: 78  VFDFMETDLEVIIKDNSLVLTPSHIK 103

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 8/50 (16%), Positives = 19/50 (38%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFK 68
           L++L H +++  + A     +  L+ ++        I +N         K
Sbjct: 54  LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIK 103

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 5e-07
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 1/87 (1%)

Query: 89  KEGNKVAIKNLKKSRIDLTRPLLL-ELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPK 147
           K+   VAIK LK    +  R   L E   +    H ++++  G         ++TEY   
Sbjct: 34  KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMEN 93

Query: 148 GSLQDILENEQFKLEPMFKNSLMNKAA 174
           G+L   L  +  +   +    ++   A
Sbjct: 94  GALDKFLREKDGEFSVLQLVGMLRGIA 120

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 3e-04
 Identities = 10/63 (15%), Positives = 23/63 (36%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           +    H ++++  G         ++TEY   G+L   L  +  +   +    ++  I   
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122

Query: 79  NGY 81
             Y
Sbjct: 123 MKY 125

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 45.6 bits (107), Expect = 7e-07
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 88  LKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              G   A+K ++  + D  +    + E+  LK+L H ++VK            L+ E+ 
Sbjct: 23  NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82

Query: 146 PKGSLQDILENEQFKLEPMFKNSL 169
            +   + +   E        K+ L
Sbjct: 83  DQDLKKLLDVCEGGLESVTAKSFL 106

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 8e-07
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL------DPPHCC 139
           +L   G  VAIK + + +    R    EL+ ++ L H ++V+            D  +  
Sbjct: 40  KLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95

Query: 140 LLTEYCPKGSLQDILENEQFK 160
           L+ +Y P+   +      + K
Sbjct: 96  LVLDYVPETVYRVARHYSRAK 116

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 45.4 bits (107), Expect = 8e-07
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 10/81 (12%)

Query: 88  LKEGNKVAIKNLKKSRI---------DLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPH 137
                + A+K +  +           +L    L E+  L+ +  H ++++          
Sbjct: 25  KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 84

Query: 138 CCLLTEYCPKGSLQDILENEQ 158
             L+ +   KG L D L  + 
Sbjct: 85  FFLVFDLMKKGELFDYLTEKV 105

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 23  HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYL 82
            H ++++            L+ +   KG L D L  +    E   +  +M  +++    L
Sbjct: 68  GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICAL 126

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 86  ELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT 142
                G   A+K LKK  +           E   L  + H  +++  G   D     ++ 
Sbjct: 24  RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83

Query: 143 EYCPKGSLQDILENEQFKLEPMFK 166
           +Y   G L  +L   Q    P+ K
Sbjct: 84  DYIEGGELFSLLRKSQRFPNPVAK 107

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 19  LKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKF 78
           L  + H  +++  G   D     ++ +Y   G L  +L   Q    P+ K     ++   
Sbjct: 58  LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLA 116

Query: 79  NGYLKTK 85
             YL +K
Sbjct: 117 LEYLHSK 123

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 5e-06
 Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 88  LKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY 144
              G   A+K L+K  I   D     + E + L++  H  L     A       C + EY
Sbjct: 27  KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86

Query: 145 CPKGSLQDILENEQFKLEPMFKN 167
              G L   L  E+   E   + 
Sbjct: 87  ANGGELFFHLSRERVFTEERARF 109

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 8/77 (10%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDP----PHCCLLTE 143
            +   K A+K L+          L      +     H+V+ +    +         ++ E
Sbjct: 34  KRTQEKFALKMLQDCPKARREVELH----WRASQCPHIVRIVDVYENLYAGRKCLLIVME 89

Query: 144 YCPKGSLQDILENEQFK 160
               G L   +++   +
Sbjct: 90  CLDGGELFSRIQDRGDQ 106

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 5/48 (10%), Positives = 16/48 (33%), Gaps = 4/48 (8%)

Query: 19  LKDLHHDHLVKFIGACLDP----PHCCLLTEYCPKGSLQDILENEQFK 62
            +     H+V+ +    +         ++ E    G L   +++   +
Sbjct: 59  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 106

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRP--LLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
              G  VA+K ++        P   + E+  LK+L+H ++VK +          L+ E+ 
Sbjct: 24  KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83

Query: 146 PKGSLQDILENEQFKLEP 163
            +   + +  +    +  
Sbjct: 84  HQDLKKFMDASALTGIPL 101

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 78  FNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRL-KDLHHDHLVKFIGACLDP 135
                   +       VA+K LK+       R L+ ELK L    HH ++V  +GAC  P
Sbjct: 30  IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89

Query: 136 P-HCCLLTEYCPKGSLQDILENEQFKLEPM 164
                ++ E+C  G+L   L +++ +  P 
Sbjct: 90  GGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 119

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 93  KVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQ 151
            VAIK L+++      + +L E   +  + + H+ + +G CL      L+T+  P G L 
Sbjct: 40  PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLL 98

Query: 152 D 152
           D
Sbjct: 99  D 99

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 5e-05
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 5/80 (6%)

Query: 88  LKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC----CLLT 142
                +VAIK +         +  L E+K L    H++++        P         L 
Sbjct: 30  NVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV 89

Query: 143 EYCPKGSLQDILENEQFKLE 162
            +     L  +L+ +    +
Sbjct: 90  THLMGADLYKLLKTQHLSND 109

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 91  GNKVAIKNLKKSRI----DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPHCCLLTEYC 145
           G   A+K LKK+ I      T     E + L+ +     LV    A        L+ +Y 
Sbjct: 52  GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 111

Query: 146 PKGSLQDILENEQFKLEPM 164
             G L   L   +   E  
Sbjct: 112 NGGELFTHLSQRERFTEHE 130

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 7e-05
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 88  LKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
            +    VA+K ++    D  +    L E+  LK+L H ++V+            L+ E+C
Sbjct: 24  RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83

Query: 146 PKGSLQDILENEQFKLEPMFKN 167
            +   +            + K+
Sbjct: 84  DQDLKKYFDSCNGDLDPEIVKS 105

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH--CCLLTEYC 145
           +    KV +K LK  +    +  +  L+ L+     +++       DP      L+ E+ 
Sbjct: 57  ITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHV 114

Query: 146 PKGSLQDILEN 156
                + + + 
Sbjct: 115 NNTDFKQLYQT 125

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 88  LKEGNKVAIKNLKKSRID--LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYC 145
            + G KVAIK L +        +    EL+ LK + H++++  +            T++ 
Sbjct: 40  GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 99

Query: 146 PKGSLQDILENEQFKLEPM 164
                      +  K E +
Sbjct: 100 LVMPFMGTDLGKLMKHEKL 118

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 3/72 (4%)

Query: 88  LKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACL-DPPHCCLLTEYCP 146
           +  G +VAIK            L +E K  K +     +  I  C  +  +  ++ E   
Sbjct: 29  IAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG 86

Query: 147 KGSLQDILENEQ 158
                      +
Sbjct: 87  PSLEDLFNFCSR 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	184
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.81
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.81
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.81
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.8
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.8
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.8
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.79
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.79
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.79
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.79
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.78
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.78
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.77
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.77
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.76
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.76
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.76
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.75
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.75
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.75
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.75
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.74
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.74
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.73
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.72
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.72
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.72
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.71
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.7
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.7
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.7
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.69
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.69
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.68
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.68
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.68
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.67
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.66
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.66
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.64
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.63
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.63
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.6
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.6
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.58
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.57
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.56
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.56
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.56
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.55
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.52
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.51
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.51
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.5
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.44
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.44
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.4
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.8
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.79
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.79
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.7
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.69
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.63
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.58
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.57
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.55
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.52
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.51
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.51
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.5
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.49
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.48
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.48
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.48
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.47
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.46
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.45
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.43
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.41
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	98.4
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.38
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.37
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.35
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.34
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.32
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.31
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.3
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.29
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.18
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.18
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.18
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.1
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.08
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.07
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.06
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.98
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.94
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.85
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.79
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.74
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	97.59
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.36
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.36
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	97.36
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.25
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.16
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.04
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.01
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	96.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	96.84
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	96.82
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.6
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	96.46
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	95.99
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.88
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	85.25

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.7e-20  Score=133.33  Aligned_cols=119  Identities=20%  Similarity=0.213  Sum_probs=103.4

Q ss_pred             ccCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      ++.++.|.+.+.++.|++|.||.+.  ...+|+.||+|.+.....   .....+.+|+.+++.++||||+++++++.+++
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAR--EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT   79 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CcchhHeEEEEEEecCCCcEEEEEE--ECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC
Confidence            4567788888999999999999987  556788999999976543   23556889999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|.+++.+.+ .+++.....++.||++||+.++
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH  123 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH  123 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998654 6899999999999999998554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.7e-20  Score=135.67  Aligned_cols=115  Identities=13%  Similarity=0.070  Sum_probs=101.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      .|.+.+.+|.|++|.||++.  ...+|..||+|.++.......+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CeEEeEEEeeCCCcEEEEEE--ECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            45667789999999999986  5567889999999876655567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |++|+|.+++.+....+++.+...++.||++||..++
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH  127 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH  127 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999998766557999999999999999998543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.1e-20  Score=133.25  Aligned_cols=118  Identities=17%  Similarity=0.171  Sum_probs=96.2

Q ss_pred             cccccchh-hhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSL-MHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+.+.+. +|.|++|.||.+.+.....+..||||.++.... ...+.|.+|+.++++++||||++++|++.+ +..|+|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            34555565 899999999998654445566899999986533 345679999999999999999999999865 568999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|+|.+++...+..+++..+..++.|||+||+.+++
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~  127 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE  127 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999987766679999999999999999996544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.80  E-value=4.5e-20  Score=137.91  Aligned_cols=117  Identities=16%  Similarity=0.065  Sum_probs=103.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      ++.|.+.+.+|.|++|.||++.  ...+|+.||+|.+........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~--~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm  102 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVT--ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  102 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEE--ETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4567888899999999999986  55679999999998765555677899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||++|+|.+++.+....+++.....++.||+.||.-++
T Consensus       103 E~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH  141 (350)
T d1koaa2         103 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH  141 (350)
T ss_dssp             CCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999766557999999999999999998543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1e-19  Score=132.58  Aligned_cols=118  Identities=19%  Similarity=0.226  Sum_probs=101.4

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ..+.+.+.+.++.|++|.||.+.  ...+|+.||+|.++.... ..+.+.+|+.+++.++||||+++++++.+++..+++
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~--~~~~~~~vAvK~i~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGV--WKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   91 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEE--EGGGTEEEEEEECCTTCS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEE--ECCCCeEEEEEEECCccc-hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence            44567778889999999999986  445688999999986543 356799999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|++.+++... ...+++..+..++.|||+||+.+++
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~  133 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK  133 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999754 4578999999999999999986554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.1e-20  Score=131.30  Aligned_cols=114  Identities=18%  Similarity=0.190  Sum_probs=98.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.+.+.+.++.|++|.||++.   ..++..||+|.++.... ..+++.+|+.+++.++||||++++|++..++..++|||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~---~~~~~~vAvK~i~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E   80 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGY---WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   80 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEE---ETTTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEE---ECCCCEEEEEEECCCcC-cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence            456677889999999999875   22567899999986443 35679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+++|+|.+++......+++..+..++.|||+||+..+
T Consensus        81 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH  118 (263)
T d1sm2a_          81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE  118 (263)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh
Confidence            99999999999877667899999999999999998544

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.5e-19  Score=131.89  Aligned_cols=114  Identities=12%  Similarity=0.159  Sum_probs=100.1

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.|++|.||++.  ...+|+.||+|.++.......+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~--~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEE--BTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEE--ECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence            346777889999999999987  567799999999987655556678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|+|.+++.+.  .+++.+...++.||+.||+-++
T Consensus        98 y~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH  133 (293)
T d1yhwa1          98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH  133 (293)
T ss_dssp             CCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999988764  4899999999999999998544

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.5e-20  Score=133.97  Aligned_cols=116  Identities=21%  Similarity=0.162  Sum_probs=97.7

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      ++.|++.+.++.|++|.||.+.  ...+|+.||+|.++.... ...+.+.+|+.+++.++||||+++++++.+++..|+|
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEE
Confidence            3457777889999999999987  556789999999976543 3345689999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++.+.. .+++.+...++.||++||..++
T Consensus        82 mEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH  120 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH  120 (271)
T ss_dssp             EECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997644 6899999999999999999544

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.79  E-value=1.1e-19  Score=135.79  Aligned_cols=116  Identities=16%  Similarity=0.029  Sum_probs=102.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.+|.|++|.||++.  ...+|+.||+|.++.........+.+|+.+++.++||||+++++++.+++.+|+|||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCV--EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            457777889999999999986  556799999999987655555678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|+|.+++...+..+++.+...++.||+.||+..+
T Consensus       107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH  144 (352)
T d1koba_         107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH  144 (352)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999988776667999999999999999998543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=1.6e-19  Score=132.20  Aligned_cols=123  Identities=16%  Similarity=0.150  Sum_probs=101.3

Q ss_pred             ccCccccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          60 QFKLEPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      +...+.+.+.+.+|.|++|.||.+..... .....||+|.+..... ...+.|.+|+.++++++||||++++|++..++.
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  101 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP  101 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            34566778888999999999999762211 1223689999876433 345679999999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+++||||++|+|.+++......+++.+++.++.|||+||+.+++
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  146 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD  146 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999998766678999999999999999986554

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=1.7e-19  Score=132.57  Aligned_cols=115  Identities=14%  Similarity=0.052  Sum_probs=95.4

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh-hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      +.|.+.+.+|.|++|.||++.  ...+|+.||+|.++..... ....+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEE--ETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEE--ECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            447788899999999999986  5567899999999865432 2445779999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||++|+|.+++...+ .+++.....++.||+.||+.++
T Consensus        87 E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH  124 (307)
T d1a06a_          87 QLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLH  124 (307)
T ss_dssp             CCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhh
Confidence            9999999999997654 6899999999999999998544

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.2e-19  Score=132.75  Aligned_cols=115  Identities=10%  Similarity=-0.042  Sum_probs=100.6

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|.+.+.++.|++|.||++.  ...+|+.||+|.++..... ...+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~--~~~~~~~~AiK~i~~~~~~-~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCV--ETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECCCTHH-HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEE--ECCCCcEEEEEEEcCCccc-HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            457777889999999999986  5567899999999875433 3457899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ||++|+|.+++...+..+++.+...++.||++||.-++
T Consensus        82 ~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH  119 (321)
T d1tkia_          82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH  119 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876657899999999999999998543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.5e-19  Score=130.87  Aligned_cols=115  Identities=15%  Similarity=0.074  Sum_probs=99.7

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch------hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI------DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      +.|.+.+.+|.|++|.||++.  ...+|+.||+|.++....      ...+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~--~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCR--EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCEEEeEEEecCCCeEEEEEE--ECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            447788889999999999986  556789999999976433      124678999999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .|+|||||++|+|.+++...+ .+++.....++.|++.||+.++
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH  130 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH  130 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhh
Confidence            999999999999999998654 6899999999999999998554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.9e-19  Score=128.25  Aligned_cols=115  Identities=17%  Similarity=0.167  Sum_probs=99.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEe
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      +.|++.+.++.|++|.||++.+   .++..||+|.++..... .+++.+|+.+++.++||||++++|++.+.+.+++|||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~---~~~~~vAvK~l~~~~~~-~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKW---RGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEE---TTTEEEEEEEEESSSSC-HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEE---CCCCEEEEEEECcCcCC-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence            4567778899999999998762   25668999999875443 5679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+++|++..++......+++..+..++.|||+||+.+++
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~  118 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES  118 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence            999999999988766678999999999999999996553

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.5e-19  Score=129.12  Aligned_cols=117  Identities=15%  Similarity=0.073  Sum_probs=101.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+.|.+.+.++.|++|.||.+.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~   84 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY   84 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEE
Confidence            3568888999999999999986  556789999999986543   23456889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||||+++|+|.+++...+ .+++.....++.|++.||+-.++
T Consensus        85 ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~  126 (288)
T d1uu3a_          85 FGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG  126 (288)
T ss_dssp             EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999999988654 68999999999999999995543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.3e-19  Score=131.21  Aligned_cols=116  Identities=15%  Similarity=0.068  Sum_probs=100.4

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      .+.|...+.++.|++|.||++.  ...+|+.||+|.++.... .....+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVS--HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEE--ETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEE--ECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3456777889999999999986  556789999999976532 3356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+++|+|.+++.+.+ .+++..+..++.|+++||.-++
T Consensus        83 mEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH  121 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR  121 (322)
T ss_dssp             EECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998654 5899999999999999998655

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.6e-19  Score=127.46  Aligned_cols=117  Identities=17%  Similarity=0.206  Sum_probs=97.3

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec--CCcE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD--PPHC  138 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~--~~~~  138 (184)
                      .+.|++.+.++.|++|.||++.  ...+|+.||+|.++....  ...+.+.+|+.+++.++||||+++++++.+  .+.+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   80 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIR--RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   80 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred             chhCEEeEEEecCCCeEEEEEE--ECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence            3567778889999999999976  556789999999976543  235568899999999999999999998865  4678


Q ss_pred             EEEEeecCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILEN---EQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~---~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+|||||++|+|.+++.+   .+..+++.....++.||++||.-.+
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH  126 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH  126 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999964   2457899999999999999997654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7.3e-19  Score=127.39  Aligned_cols=110  Identities=19%  Similarity=0.173  Sum_probs=89.9

Q ss_pred             hhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEeecCCC
Q psy8884          71 LMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKG  148 (184)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~~~~g  148 (184)
                      .+|.|++|.||++.+.....++.||+|.++....  ...+.+.+|+.++++++||||++++|+|.+ +..++||||+++|
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g   92 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG   92 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence            4889999999998644444567899999975432  335679999999999999999999999865 5678999999999


Q ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         149 SLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       149 sl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +|.+++.+.. .+++..+..++.|||.||+..++
T Consensus        93 ~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~  125 (277)
T d1xbba_          93 PLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE  125 (277)
T ss_dssp             EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHh
Confidence            9999998654 68999999999999999986543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1e-18  Score=126.54  Aligned_cols=115  Identities=17%  Similarity=0.121  Sum_probs=96.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      ..+.+.+.+.++.|++|.||.+.    + +..||+|.++....  ...+.|.+|+.++++++||||+++++++.. +..+
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~----~-~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~   79 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGK----W-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA   79 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEE----S-SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEE----E-CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEE
Confidence            34556777889999999999875    2 34699999976533  345678999999999999999999998754 5689


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+++|+|.+++...+..+++..+..++.|||+||+.+++
T Consensus        80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~  122 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA  122 (276)
T ss_dssp             EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999998766679999999999999999996654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.8e-19  Score=126.92  Aligned_cols=115  Identities=22%  Similarity=0.203  Sum_probs=95.3

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCL  140 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~l  140 (184)
                      ..+.+.+.+.++.|++|.||++.    .+|..||+|.++...  ..+.+.+|+.++++++||||++++|++.+ .+.+|+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~----~~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~l   78 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGD----YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEE----ETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred             CHHHeEEeEEEecCCCeEEEEEE----ECCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEE
Confidence            45567777889999999999864    578999999997643  35678999999999999999999998865 466899


Q ss_pred             EEeecCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQ-FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~-~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||+++|+|.+++.+.. ..+++..++.++.|||+||+-+++
T Consensus        79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~  121 (262)
T d1byga_          79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG  121 (262)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc
Confidence            999999999999997543 358999999999999999996554

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.75  E-value=1.4e-18  Score=125.86  Aligned_cols=115  Identities=15%  Similarity=0.080  Sum_probs=98.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---------hhhHHHHHHHHHHHcCC-Ccchhhhheeee
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---------DLTRPLLLELKRLKDLH-HDHLVKFIGACL  133 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---------~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~  133 (184)
                      +.|++.+.++.|++|.||++.  ...+|+.||+|.++....         ...+.+.+|+.+++++. ||||+++++++.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~--~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCI--HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             ccCEEceEEecCcCeEEEEEE--ECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            356777889999999999876  556789999999976532         12345789999999997 999999999999


Q ss_pred             cCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         134 DPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       134 ~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +++.+|+||||+++|+|.++++..+ .+++.+...++.||++||+..+
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH  127 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH  127 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998655 6899999999999999999544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2e-18  Score=124.59  Aligned_cols=113  Identities=16%  Similarity=0.084  Sum_probs=94.6

Q ss_pred             ccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec----CCcEEE
Q psy8884          67 FKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD----PPHCCL  140 (184)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~----~~~~~l  140 (184)
                      .+.+.++.|++|.||.+.  ...++..||+|.++....  ...+.+.+|+.+++.++||||+++++++.+    .+.+|+
T Consensus        12 ~~~~~iG~G~fg~Vy~~~--~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EeeeEEecCcCcEEEEEE--ECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence            455568999999999986  556788999999976543  335678899999999999999999998864    356899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||+++|+|.+++.+.. .+++.....++.||++||+.+++
T Consensus        90 vmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~  130 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT  130 (270)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998654 68999999999999999986654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.6e-18  Score=125.24  Aligned_cols=115  Identities=22%  Similarity=0.216  Sum_probs=94.9

Q ss_pred             ccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      .+.+.+.+.++.|++|.||.+.   ...+..||||.++.... ..+.+.+|+.++++++||||++++|++.+ +..++||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~---~~~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~   86 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEE---ETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEE---ECCCCEEEEEEEccCcC-CHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence            3567777889999999999875   22467899999986543 25679999999999999999999998754 5679999


Q ss_pred             eecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         143 EYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       143 e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||+++|+|.+++... ...+++..++.++.|||+||..+++
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~  127 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE  127 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999988643 3358999999999999999985543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=3e-18  Score=126.31  Aligned_cols=118  Identities=15%  Similarity=0.104  Sum_probs=101.5

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.++.|++|.||++.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++++.+++..
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   79 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIR--SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   79 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEE--ECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCee
Confidence            45677888899999999999986  556789999999986432   3356788999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+||||+++|++..++.... .+++.....++.||+.||+-.++
T Consensus        80 ~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~  122 (316)
T d1fota_          80 FMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHS  122 (316)
T ss_dssp             EEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhcc
Confidence            99999999999999888655 57888888999999999996554

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.1e-18  Score=127.22  Aligned_cols=117  Identities=18%  Similarity=0.075  Sum_probs=101.7

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~  138 (184)
                      .++.|.+.+.+|.|++|.||++.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++++.+.+.+
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~--~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   80 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVR--EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccc
Confidence            46678888999999999999986  567899999999986533   2346688999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+||||+++|+|.+++.+.+ .+++.....++.||+.||.-.+
T Consensus        81 ~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH  122 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH  122 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhh
Confidence            99999999999999998755 6789999999999999998443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=1.8e-18  Score=127.13  Aligned_cols=113  Identities=16%  Similarity=0.154  Sum_probs=96.1

Q ss_pred             cccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEE
Q psy8884          66 MFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLT  142 (184)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~  142 (184)
                      |+..+.+|.|++|.||++.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFAR--DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEE--ETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEeeEEEecCCCeEEEEEE--ECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            5556778999999999986  556789999999986543   23456889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         143 EYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       143 e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||++|++..++... ..+++.++..++.||++||...+
T Consensus        95 E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH  132 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH  132 (309)
T ss_dssp             ECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999987766554 36899999999999999998544

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.5e-18  Score=124.56  Aligned_cols=119  Identities=23%  Similarity=0.224  Sum_probs=96.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCc--EEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGN--KVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~~  137 (184)
                      +.+.+.+.+.+|.|++|.||++.+  ..+|.  .||+|.++.... ...+.+.+|+.+++.+ +||||++++|++.+.+.
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~--~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~   85 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARI--KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   85 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEE--EETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEE--CCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCe
Confidence            445677888999999999999863  33444  578888865432 3456799999999998 79999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENE---------------QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~---------------~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++||||+++|+|.++|...               ...+++.++..++.|||+||...++
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~  145 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ  145 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999643               3568999999999999999985443

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.4e-18  Score=123.17  Aligned_cols=116  Identities=23%  Similarity=0.240  Sum_probs=96.9

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.+.+.+.+.++.|++|.||.+.   ...+..||+|.++..... .+.|.+|+.+++.++|+||++++|++.+ +..++|
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~---~~~~~~vAiK~l~~~~~~-~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv   89 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV   89 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEE---ETTTEEEEEEECCTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             CHHHEEEeeEEeeCCCeEEEEEE---ECCCCEEEEEEECcccCC-HHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEE
Confidence            44678888899999999999875   234568999999865432 4679999999999999999999999854 568999


Q ss_pred             EeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         142 TEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |||+++|++..++... ...+++.+++.++.|||.||+.+++
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  131 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER  131 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999988753 3468999999999999999996654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.4e-17  Score=120.94  Aligned_cols=120  Identities=15%  Similarity=0.127  Sum_probs=98.9

Q ss_pred             ccccccchhhhhhcccceeeecceeee--cCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELLK--EGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .+.+...+++|.|++|.||.+.+....  ....||+|.++.... .....|.+|+.+++.++||||++++|++.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            345677788999999999987633211  124799999976433 33456899999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++|||+.+|++.+++......+++.++..++.|||.||+.+++
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~  128 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN  128 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc
Confidence            9999999999999988776679999999999999999995543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=4.9e-18  Score=123.00  Aligned_cols=115  Identities=16%  Similarity=0.091  Sum_probs=96.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCC----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----  136 (184)
                      +.|.+.+.++.|++|.||++.  ...+|+.||+|.++....   .....+.+|+.+++.++||||+++++++...+    
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ceeEEeEEEeeCCCeEEEEEE--ECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            346777889999999999986  566799999999986533   23456889999999999999999999887543    


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..|+||||+++|+|.+++...+ .+++.+...++.||+.||+.++
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH  128 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH  128 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            3789999999999999987654 6899999999999999999554

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=9.5e-18  Score=123.77  Aligned_cols=115  Identities=17%  Similarity=0.147  Sum_probs=96.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHH-cCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLK-DLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~-~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.|.+.+.+|.|++|.||++.  ...+|+.||+|.++....   ...+.+..|..++. .++||||+++++++.+++..|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~--~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAE--FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE--ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEE--ECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCcee
Confidence            457777889999999999987  556899999999986432   22445667777665 689999999999999999999


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +||||+++|+|.+++.... .+++.+...++.||+.||+-.+
T Consensus        80 ivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH  120 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH  120 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998654 5789999999999999998443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2e-17  Score=122.29  Aligned_cols=120  Identities=22%  Similarity=0.171  Sum_probs=94.8

Q ss_pred             Cccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ..+.+.+.+.++.|++|.||.+.+.+.   .....||+|.+..... .....+.+|+.++.++ +||||+++++++.+.+
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            445678888999999999999863221   1234799999875432 3456789999999988 8999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ----------------------FKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~----------------------~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..++|||||++|+|.++|+...                      ..+++..++.++.||++||+.++
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH  181 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE  181 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997542                      24788999999999999998544

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3e-17  Score=118.53  Aligned_cols=119  Identities=17%  Similarity=0.142  Sum_probs=97.3

Q ss_pred             ccccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEE
Q psy8884          63 LEPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCL  140 (184)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~l  140 (184)
                      .+.+.+.+.++.|++|.||.+.+... ..+..||+|.++.... ...+.+.+|+.+++.++||||+++++++. .+..|+
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            45677888999999999998763211 2345789999875433 33567899999999999999999999986 467899


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||+++|++.+++......+++..+..++.||++||+..++
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  126 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES  126 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999988776678999999999999999995544

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.8e-17  Score=121.20  Aligned_cols=116  Identities=15%  Similarity=0.093  Sum_probs=94.2

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.+|.|++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++++.+++.+|+|
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEE--ECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence            467777889999999999987  556789999999976543  2356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |||+.++.+..........+++..+..++.||+.||..++
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH  119 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH  119 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh
Confidence            9999875444443444557899999999999999998544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=2.9e-17  Score=123.11  Aligned_cols=118  Identities=14%  Similarity=0.012  Sum_probs=97.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh---hhHHHHH---HHHHHHcCCCcchhhhheeeecC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID---LTRPLLL---ELKRLKDLHHDHLVKFIGACLDP  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~---~~~~~~~---e~~~l~~l~h~ni~~l~~~~~~~  135 (184)
                      .++.|.+.+.+|.|++|.||++.  ...+|+.||+|+++.....   ....+.+   ++.+++.++||||+++++++.+.
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~--~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~   79 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCR--KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP   79 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred             CHHhCeeeeEEecCCCeEEEEEE--ECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC
Confidence            45678888999999999999986  5567999999999764331   1222333   46677888999999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+|+||||+++|+|.+++.+.. .+++.....++.||+.||+-.++
T Consensus        80 ~~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~  125 (364)
T d1omwa3          80 DKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN  125 (364)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998754 57899999999999999995543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=4.4e-17  Score=121.55  Aligned_cols=118  Identities=16%  Similarity=0.115  Sum_probs=102.2

Q ss_pred             cCccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..++.|.+.+.+|.|++|.||++.  ...+|+.||+|.++....   ...+.+.+|+.+++.++||||+++++.+.+.+.
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~--~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVK--HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCccCeEEEEEeecCcCcEEEEEE--ECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccc
Confidence            346778888899999999999986  556799999999976432   234568899999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         138 CCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+++|||+.+|++..++.+.+ .+++.....++.||+.||..+|
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH  158 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH  158 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997655 6899999999999999998554

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.2e-17  Score=118.82  Aligned_cols=121  Identities=14%  Similarity=0.092  Sum_probs=99.1

Q ss_pred             Cccccccchhhhhhcccceeeecceee---ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCc
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL---KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPH  137 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~  137 (184)
                      ..+.+.+.+.+|.|++|.||.+.+.+.   ..+..||||.++.... .....+.+|+.++++++||||++++|.+...+.
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            446677788899999999999875443   2357899999975433 334568999999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         138 CCLLTEYCPKGSLQDILENEQ---------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       138 ~~lv~e~~~~gsl~~~l~~~~---------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .++||||+++|+|.+++....         ..+++..+..++.|+|+||+-+++
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~  151 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA  151 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999986421         346888999999999999985543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3e-17  Score=120.66  Aligned_cols=121  Identities=23%  Similarity=0.178  Sum_probs=100.1

Q ss_pred             Cccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecCC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDPP  136 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~~  136 (184)
                      ..+.+.+.+.+|.|++|.||.+.+.+   ...++.||+|.++.... .....+.+|+.++..+ +||||+++++++.+++
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~  100 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence            44677788899999999999986332   24567999999986543 3455788999999998 6999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-----------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-----------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-----------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++||||++|++.++++...                 ..+++..+..++.||++||+.+++
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~  163 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS  163 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999997532                 257889999999999999996543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.6e-17  Score=117.90  Aligned_cols=116  Identities=18%  Similarity=0.131  Sum_probs=93.5

Q ss_pred             cchhhhhhcccceeeecceee-ecCcEEEEeEeecc-chhhhHHHHHHHHHHHcCCCcchhhhheeeec-CCcEEEEEee
Q psy8884          68 KNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKS-RIDLTRPLLLELKRLKDLHHDHLVKFIGACLD-PPHCCLLTEY  144 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-~~~~~lv~e~  144 (184)
                      +.+.+|.|++|.||.+.+... .+...||||.++.. +....+.+.+|+.++++++||||++++|++.+ +...++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            356799999999998763211 12336899999753 33446779999999999999999999999875 4578999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccCC
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIHP  183 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~~  183 (184)
                      |++|++.+++......+++..++.++.|+|+||.-.+++
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~  149 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK  149 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc
Confidence            999999999987766788899999999999999966543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=9.1e-17  Score=117.53  Aligned_cols=122  Identities=17%  Similarity=0.169  Sum_probs=100.8

Q ss_pred             cCccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC
Q psy8884          61 FKLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP  136 (184)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~  136 (184)
                      +..+.+.+.+.++.|++|.||++.+.+   ...+..||+|.++.... ...+.+.+|+.+++.++|||++++++++...+
T Consensus        10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~   89 (301)
T d1lufa_          10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK   89 (301)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence            345667888889999999999986433   23457899999986543 33567999999999999999999999999999


Q ss_pred             cEEEEEeecCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQ-----------------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..++++||+++|+|.+++....                       ..+++..++.++.|+|.||+..++
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~  158 (301)
T d1lufa_          90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE  158 (301)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc
Confidence            9999999999999999996421                       247888999999999999986554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.2e-16  Score=116.96  Aligned_cols=111  Identities=17%  Similarity=0.078  Sum_probs=88.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeecCC----cEEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----HCCL  140 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----~~~l  140 (184)
                      .+.+.+.+|.|++|.||.+.    ++|+.||+|.++..... ......|+..+..++||||+++++++.+.+    ..|+
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~----~~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGK----WRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEE----ETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEE----ECCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            35566778999999998864    68999999999765321 112234555566789999999999987643    5789


Q ss_pred             EEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         141 LTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       141 v~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ||||+++|+|.+++++.  .+++.++..++.|+|.||+..|+
T Consensus        79 v~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~  118 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM  118 (303)
T ss_dssp             EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865  48899999999999999997654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.3e-16  Score=116.21  Aligned_cols=115  Identities=19%  Similarity=0.228  Sum_probs=93.6

Q ss_pred             ccccchhhhhhcccceeeecceeeecC----cEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEG----NKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      .|...+.+|.|++|.||.+.+  ..+|    .+||+|.++.... ...+.+.+|+.+++.++||||++++|+|.++ ..+
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~--~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~   86 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLW--IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEE--CC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred             HCEEeeEEecCCCeEEEEEEE--cCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Cee
Confidence            466778899999999998762  2333    3789999875432 3456799999999999999999999999864 578


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +++|++.+|+|.+.+......+++..++.++.|||+||+-+++
T Consensus        87 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~  129 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  129 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999998877789999999999999999996554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.5e-17  Score=116.14  Aligned_cols=118  Identities=19%  Similarity=0.127  Sum_probs=87.7

Q ss_pred             cccccchhhhhhcccceeeecceee-ecCcEEEEeEeeccch---hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELL-KEGNKVAIKNLKKSRI---DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCC  139 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~  139 (184)
                      +.|++.+.++.|++|.||++.+... .....||+|.++....   ...+.|.+|+.+++.++||||++++|.+.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            3466777899999999998752211 1123789999976533   334678999999999999999999999976 4678


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +||||+++|++.+++......+++..++.++.|||+||..+++
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  129 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES  129 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999888766679999999999999999996554

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.4e-16  Score=113.77  Aligned_cols=121  Identities=20%  Similarity=0.212  Sum_probs=93.0

Q ss_pred             Cccccccchhhhhhcccceeeecceee-----ecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeec
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELL-----KEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLD  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~  134 (184)
                      ..+.+.+.+.++.|++|.||.+...+.     .++..||+|.++.... .....+.+|...+..+ +||||++++++|.+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            346677788899999999999763221     2235799999976543 3356788888888887 79999999999999


Q ss_pred             CCcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 PPHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ~~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .+..++||||+++|++.+++....               ..+++.+++.++.|||.||.-.++
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~  153 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS  153 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999997543               347999999999999999985443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=8.2e-17  Score=117.66  Aligned_cols=109  Identities=17%  Similarity=0.167  Sum_probs=87.8

Q ss_pred             hhhhhhcccceeeecceeeecCcEEEEeEeeccchh-----hhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEEEee
Q psy8884          70 SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID-----LTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLLTEY  144 (184)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~-----~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv~e~  144 (184)
                      +++|.|++|.||++.  ...+|+.||+|.++.....     ..+.+.+|+.+++.++||||+++++++...+..|+||||
T Consensus         4 ~~lG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           4 DFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEETTEEEEEEE--CSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             eEeccCcCeEEEEEE--ECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            568899999999986  5567899999999764331     234688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         145 CPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       145 ~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +.+|++..+.. ....+++..+..++.||+.||..++
T Consensus        82 ~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH  117 (299)
T d1ua2a_          82 METDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLH  117 (299)
T ss_dssp             CSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             hcchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhh
Confidence            99987665554 3446888889999999999999544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-16  Score=118.08  Aligned_cols=112  Identities=10%  Similarity=0.021  Sum_probs=91.4

Q ss_pred             ccccccc-hhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHH-cCCCcchhhhheeeec----CC
Q psy8884          63 LEPMFKN-SLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLK-DLHHDHLVKFIGACLD----PP  136 (184)
Q Consensus        63 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~-~l~h~ni~~l~~~~~~----~~  136 (184)
                      ++.|.+. +.+|.|++|.||++.  ...+|+.||+|.++..     ..+.+|+.++. ..+||||+++++++.+    .+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~--~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIF--NKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEE--ECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            3455554 568999999999987  5667899999999753     34678888865 4589999999998865    36


Q ss_pred             cEEEEEeecCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENE-QFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~-~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      .+|+|||||++|+|.+++.+. ...+++.+...++.||+.||+..+
T Consensus        83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH  128 (335)
T d2ozaa1          83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  128 (335)
T ss_dssp             EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999864 346899999999999999998544

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.60  E-value=1e-15  Score=111.03  Aligned_cols=114  Identities=15%  Similarity=0.084  Sum_probs=94.9

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.+|.|++|.||++.  . .+|+.||+|+++....  .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~--~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQ--N-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEE--E-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CCceeccEEecCCCcEEEEEE--e-CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEE
Confidence            456667788999999999875  2 3688999999976533  2356789999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +|++.++.+..+... ...+++.....++.||+.||..++
T Consensus        79 ~e~~~~~~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH  117 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCH  117 (286)
T ss_dssp             EECCSEEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeehhhhHHHHHhh-cCCcchhhhHHHHHHHHHHHHHhc
Confidence            999988766665544 457899999999999999998554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.4e-15  Score=110.51  Aligned_cols=114  Identities=15%  Similarity=0.115  Sum_probs=97.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCCcEEEE
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPPHCCLL  141 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~~~~lv  141 (184)
                      +.|...+.++.|++|.||++.  ...+|+.||+|.++....  .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEE--ECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence            456777889999999999987  566789999999976543  2356788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhc
Q psy8884         142 TEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLR  180 (184)
Q Consensus       142 ~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~  180 (184)
                      ++++.++++..++... ..+++..+..++.|+++||+..
T Consensus        80 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~l  117 (292)
T d1unla_          80 FEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFC  117 (292)
T ss_dssp             EECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeccccccccccccc-cccchhHHHHHHHHHHHHHHHh
Confidence            9999999888877654 3678999999999999999844

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=7.2e-16  Score=111.21  Aligned_cols=115  Identities=17%  Similarity=0.121  Sum_probs=94.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchh------hhHHHHHHHHHHHcCC--CcchhhhheeeecCC
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRID------LTRPLLLELKRLKDLH--HDHLVKFIGACLDPP  136 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~------~~~~~~~e~~~l~~l~--h~ni~~l~~~~~~~~  136 (184)
                      .|.+.+.++.|++|.||.+.  ...+|+.||+|.++.....      ....+.+|+.+++.++  ||||+++++++.+++
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGI--RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             eEEEeEEEeeCCCeEEEEEE--ECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            46777889999999999986  5567899999999764321      1234678999999886  899999999999999


Q ss_pred             cEEEEEeecCC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         137 HCCLLTEYCPK-GSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       137 ~~~lv~e~~~~-gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ..+++|||+.+ +++.+++.... .+++.+...++.||++||+..++
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~  128 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN  128 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999976 67778887644 68999999999999999995544

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.5e-15  Score=110.99  Aligned_cols=114  Identities=17%  Similarity=0.078  Sum_probs=93.3

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecC-----C
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDP-----P  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~-----~  136 (184)
                      +.|...+.+|.|++|.||++.  ...+|+.||+|.++....  ...+.+.+|+.+++.++|+|++++++++...     .
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEE--ETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCeEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            347777889999999999986  667899999999976432  3345688999999999999999999988643     2


Q ss_pred             cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 ~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ..+++++++.+|+|.+++...  .+++.....++.||+.||+.++
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH  138 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH  138 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHH
Confidence            345667788999999999654  5899999999999999999544

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.3e-15  Score=109.98  Aligned_cols=113  Identities=13%  Similarity=0.016  Sum_probs=89.2

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch-hhhHHHHHHHHHHHcCCCcchhhhheeeecCC----cEE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP----HCC  139 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~----~~~  139 (184)
                      .|...+.+|.|++|.||++.  ...+|+.||+|.++.... ...+.+.+|+.+++.++|||++++++.+....    ..+
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~--~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             TEEEEEECC---CCCEEEEE--ETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CeEEEEEEeeccCeEEEEEE--ECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            46777889999999999987  567899999999976433 33567889999999999999999999987543    234


Q ss_pred             EEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         140 LLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       140 lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++++++.+|+|.+++...  .+++..+..++.|+++||+..+
T Consensus        87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH  126 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH  126 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            445667799999999764  4899999999999999999543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.8e-15  Score=110.24  Aligned_cols=113  Identities=16%  Similarity=0.090  Sum_probs=86.8

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeecCC-----
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLDPP-----  136 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~~~-----  136 (184)
                      +.|...+.+|.|++|.||++.  ...+|+.||+|.++....  ...+.+.+|+.+++.++|||++++++++...+     
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             SSEEEEEEC------CEEEEE--ETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             CcEEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            456677889999999999986  556799999999975432  33557889999999999999999999987654     


Q ss_pred             -cEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         137 -HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       137 -~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                       .+|++|||+ ++++..+++..  .+++.....++.||+.||..++
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH  138 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH  138 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHH
Confidence             579999999 45777777553  5899999999999999998544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.56  E-value=3.1e-15  Score=110.46  Aligned_cols=111  Identities=13%  Similarity=0.056  Sum_probs=93.0

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-Ccchhhhheeeec--CCcE
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLD--PPHC  138 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~--~~~~  138 (184)
                      ..+.|.+.+.++.|++|.||++.  ...+|+.||+|+++...   .+.+.+|+.++..+. ||||+++++++..  ....
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~--~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAI--NITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence            34567888889999999999987  66789999999998643   456789999999985 9999999999874  3569


Q ss_pred             EEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         139 CLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      ++||||+.+|+|..+.    ..+++..+..++.||+.||+.++
T Consensus       108 ~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH  146 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH  146 (328)
T ss_dssp             EEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999987654    25889999999999999998544

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=6.3e-15  Score=107.49  Aligned_cols=121  Identities=21%  Similarity=0.176  Sum_probs=91.9

Q ss_pred             Cccccccchhhhhhcccceeeeccee---eecCcEEEEeEeeccch-hhhHHHHHHHHHHHcC-CCcchhhhheeeecC-
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKEL---LKEGNKVAIKNLKKSRI-DLTRPLLLELKRLKDL-HHDHLVKFIGACLDP-  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~ni~~l~~~~~~~-  135 (184)
                      ..+.+.+.+.+|.|++|.||.+.+.+   ...++.||+|.++.... ...+.+..|...+.++ +|+||+.+++.+... 
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            34668888899999999999976332   23457899999986433 3355677888877776 688999999887654 


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQ---------------FKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~---------------~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +..+++||||++|+|.+++....               ..+++.+++.++.||++||+..++
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  152 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS  152 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh
Confidence            56899999999999999997532               347899999999999999985543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.5e-15  Score=108.89  Aligned_cols=119  Identities=18%  Similarity=0.104  Sum_probs=98.0

Q ss_pred             Cccccccchhhhhhcccceeeecce-eeecCcEEEEeEeeccch----hhhHHHHHHHHHHHcCCC-cchhhhheeeecC
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKE-LLKEGNKVAIKNLKKSRI----DLTRPLLLELKRLKDLHH-DHLVKFIGACLDP  135 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vavK~l~~~~~----~~~~~~~~e~~~l~~l~h-~ni~~l~~~~~~~  135 (184)
                      .++.|.+.+.++.|++|.||++... +..+|+.||+|.++....    ...+.+.+|+.++++++| |||+++++.+.+.
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            5677888899999999999987521 123688999999975432    234567899999999976 7999999999999


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      +..+++|||+.+|+|.+++...+ .+++.....++.||+.||...+
T Consensus       102 ~~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH  146 (322)
T d1vzoa_         102 TKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH  146 (322)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999998765 4678888899999999998543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.6e-14  Score=107.58  Aligned_cols=112  Identities=15%  Similarity=0.101  Sum_probs=87.8

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhheeeec------CCcE
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFIGACLD------PPHC  138 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~------~~~~  138 (184)
                      .|.....+|.|++|.||++.  ...+|+.||+|.++.....    ..+|+.+++.++|+||+++++++..      ...+
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~--~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAK--LCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEE--ECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            35556779999999999987  5567999999999765432    2479999999999999999998753      2357


Q ss_pred             EEEEeecCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         139 CLLTEYCPKGSLQDILE--NEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       139 ~lv~e~~~~gsl~~~l~--~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      ++||||+++|.+..+..  .....+++.++..++.||++||+.+++
T Consensus        95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~  140 (350)
T d1q5ka_          95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS  140 (350)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            89999998764443332  234568999999999999999996654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-14  Score=107.08  Aligned_cols=113  Identities=12%  Similarity=0.046  Sum_probs=89.5

Q ss_pred             cccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec------C
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD------P  135 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~------~  135 (184)
                      +.|...+.+|.|++|.||++.  +..+|+.||+|+++....  .....+.+|+.+++.++||||+++++++..      .
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~--d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEE--ETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             CCeEEEEEeecCcCeEEEEEE--ECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence            457777889999999999987  566799999999986533  234568899999999999999999999864      3


Q ss_pred             CcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         136 PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       136 ~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      +.+|+||||+.++ +.+.+.   ..+++.....++.||+.||+-+++
T Consensus        95 ~~~~iv~Ey~~~~-l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~  137 (355)
T d2b1pa1          95 QDVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLHS  137 (355)
T ss_dssp             CEEEEEEECCSEE-HHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEeccchH-HHHhhh---cCCCHHHHHHHHHHHHHHHHHhhh
Confidence            6789999999775 444443   257899999999999999995543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.4e-14  Score=105.15  Aligned_cols=118  Identities=18%  Similarity=0.147  Sum_probs=91.9

Q ss_pred             CccccccchhhhhhcccceeeecceeeecCcEEEEeEeeccch--hhhHHHHHHHHHHHcCCCcchhhhheeeec-----
Q psy8884          62 KLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI--DLTRPLLLELKRLKDLHHDHLVKFIGACLD-----  134 (184)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~ni~~l~~~~~~-----  134 (184)
                      .++.|++.+.+|.|++|.||.+.  ...+|+.||+|.++....  .....+.+|+.+++.++|+|++++++.+..     
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~--~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~   85 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKAR--HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   85 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEE--ETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred             ccCCEEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccc
Confidence            46778888899999999999986  556789999999865432  335678899999999999999999998765     


Q ss_pred             ---CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         135 ---PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       135 ---~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                         .+..+++|||+.++.+... ......+++.....++.||++||...++
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~-~~~~~~~~~~~~~~i~~qil~~l~~lH~  135 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYIHR  135 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHH-TCTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCceEEEEEeccCCCccchh-hhcccccccHHHHHHHHHHHHHHHHhcc
Confidence               3468999999998765544 3444568889999999999999985543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.5e-14  Score=102.63  Aligned_cols=116  Identities=13%  Similarity=0.065  Sum_probs=88.8

Q ss_pred             cccccchhhhhhcccceeeecceeeec-CcEEEEeEeeccch--hhhHHHHHHHHHHHcC---CCcchhhhheeeec---
Q psy8884          64 EPMFKNSLMHDIVKFNGYLKTKELLKE-GNKVAIKNLKKSRI--DLTRPLLLELKRLKDL---HHDHLVKFIGACLD---  134 (184)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~ni~~l~~~~~~---  134 (184)
                      +.|.+.+.++.|++|.||++.  ...+ ++.||+|.++....  .....+.+|+.+++.+   +||||+++++++..   
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~--~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE--ETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CCEEEEEEEecccCeEEEEEE--EECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            457777889999999999875  3333 56799999976433  2234566787776655   89999999998753   


Q ss_pred             --CCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         135 --PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       135 --~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                        ....++++||+.+|.+..........+++.....++.|++.||+-++
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH  133 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH  133 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence              34689999999998776666555667899999999999999998544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.44  E-value=1.9e-13  Score=99.25  Aligned_cols=113  Identities=15%  Similarity=-0.050  Sum_probs=94.4

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC-cchhhhheeeecCCcEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH-DHLVKFIGACLDPPHCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h-~ni~~l~~~~~~~~~~~lv~e  143 (184)
                      .|.+.+.++.|++|.||++.  ...+|+.||+|.++....  ...+.+|+..+..+.| +|++.+++++......++|||
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~--~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGT--NLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEE--ETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEE--ECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            46677889999999999987  566789999999865432  3456788889998876 889999999998999999999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      |+ +|+|.+++...+..+++.....++.|++.||+..++
T Consensus        82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~  119 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE  119 (293)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH
Confidence            98 679999998766678999999999999999995544

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=5e-13  Score=97.24  Aligned_cols=112  Identities=17%  Similarity=-0.018  Sum_probs=89.1

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCCCcchhhhh-eeeecCCcEEEEEe
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHHDHLVKFI-GACLDPPHCCLLTE  143 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni~~l~-~~~~~~~~~~lv~e  143 (184)
                      .|.+.+.++.|++|.||.+.  ...+|+.||+|.++....  ...+..|+.+++.+.|+|++..+ .+....+..++|||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~--~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGT--DIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEE--ETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEE--ECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            47777889999999999986  556789999999876532  34578899999999888766654 44566788899999


Q ss_pred             ecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhcc
Q psy8884         144 YCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVLRI  181 (184)
Q Consensus       144 ~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~~~  181 (184)
                      |+. |++...+......+++..+..++.|++.||+-.+
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  120 (299)
T d1ckia_          84 LLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH  120 (299)
T ss_dssp             CCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH
Confidence            985 5677777665667899999999999999998543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=3.3e-10  Score=82.11  Aligned_cols=74  Identities=16%  Similarity=0.291  Sum_probs=59.3

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      -|.+ |+.++++++|+||+++.|+|.+.+..+++||||++|++.+.+......+++.....+......|..|++.
T Consensus        73 ~~~~-E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  146 (299)
T d1jpaa_          73 DFLS-EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD  146 (299)
T ss_dssp             HHHH-HHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            4555 9999999999999999999999999999999999999999887655455555555566666666666654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=2.6e-09  Score=79.09  Aligned_cols=115  Identities=12%  Similarity=0.080  Sum_probs=84.0

Q ss_pred             ccccchhhhhhcccceeeecceeeecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-----------Ccchhhhheeee
Q psy8884          65 PMFKNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-----------HDHLVKFIGACL  133 (184)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----------h~ni~~l~~~~~  133 (184)
                      .|.+.+.++.|++|.||++.  ...+|+.||+|+++..... .+.+.+|+.+++.+.           |+||+++++.+.
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~--~~~~g~~vAvKvi~~~~~~-~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAK--DMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEE--ETTTTEEEEEEEECSCHHH-HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEE--ECCCCCEEEEEEEeccccc-hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            37777889999999999986  5678999999999865432 456778888887765           467888887765


Q ss_pred             c--CCcEEEEEeecCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHhhhccC
Q psy8884         134 D--PPHCCLLTEYCPKGSLQDILE--NEQFKLEPMFKNSLMNKAAFNRVLRIH  182 (184)
Q Consensus       134 ~--~~~~~lv~e~~~~gsl~~~l~--~~~~~l~~~~~~~i~~qi~~gl~~~~~  182 (184)
                      .  ....+++++++..+.......  .....+++.....++.||++||+.+++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~  143 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR  143 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence            3  455667777766554333322  234567888999999999999986653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=4.3e-10  Score=80.01  Aligned_cols=76  Identities=24%  Similarity=0.412  Sum_probs=57.6

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.|.+ |+.++.+++|+|++++.|+|.+.+..++++|||++|++.+.+......+.+-....+......|..|++.
T Consensus        44 ~~~~~~-E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~  119 (263)
T d1sm2a_          44 EEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE  119 (263)
T ss_dssp             HHHHHH-HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhc
Confidence            445666 9999999999999999999999999999999999999999887655444443333444445555545543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.6e-09  Score=78.02  Aligned_cols=88  Identities=19%  Similarity=0.329  Sum_probs=65.2

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELL   88 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (184)
                      ..|.+ |+.++++++|+||+++.+++.+.+..+++||||++|++.+.+.+....++......+......+..|++.    
T Consensus        54 ~~~~~-E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~----  128 (288)
T d2jfla1          54 EDYMV-EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD----  128 (288)
T ss_dssp             GGTHH-HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHH-HHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----
Confidence            34555 9999999999999999999999999999999999999999876544344444444555555555656654    


Q ss_pred             ecCcEEEEeEeeccch
Q psy8884          89 KEGNKVAIKNLKKSRI  104 (184)
Q Consensus        89 ~~g~~vavK~l~~~~~  104 (184)
                         ..++++.++++++
T Consensus       129 ---~~ivHrDiKp~NI  141 (288)
T d2jfla1         129 ---NKIIHRDLKAGNI  141 (288)
T ss_dssp             ---TTEECCCCSGGGE
T ss_pred             ---CCEEEeecChhhe
Confidence               3366666666554

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1.9e-09  Score=77.46  Aligned_cols=73  Identities=19%  Similarity=0.296  Sum_probs=55.0

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      -|.+ |+.++.+++|+|+++++|+|.++ ..+++||||++|++.+.+......++.-....+......|..|++.
T Consensus        55 ~~~~-E~~il~~l~HpnIv~l~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~  127 (285)
T d1u59a_          55 EMMR-EAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE  127 (285)
T ss_dssp             HHHH-HHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEeeEeeeeccC-eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4555 99999999999999999999764 5789999999999999876554445544444555556555555553

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=2.8e-09  Score=76.67  Aligned_cols=75  Identities=23%  Similarity=0.425  Sum_probs=56.3

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcc-cCccccccchhhhhhcccceeeec
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      +.|.+ |+.++.+++|+|+++++|+|.+++..++++|||++|++.+.+.... ..++......+......|..|+|.
T Consensus        58 ~~~~~-E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~  133 (287)
T d1opja_          58 EEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK  133 (287)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            34555 9999999999999999999999999999999999999999887532 233333333444455555556553

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.4e-09  Score=77.92  Aligned_cols=87  Identities=22%  Similarity=0.343  Sum_probs=63.3

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELL   88 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (184)
                      ..|.+ |+.++.+++|+|++++.|+|.++ ..++++|||++|++.+.+......++......+......|..|+|.    
T Consensus        49 ~~~~~-E~~~l~~l~HpnIv~~~~~~~~~-~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~----  122 (276)
T d1uwha_          49 QAFKN-EVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA----  122 (276)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECSS-SCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHH-HHHHHHhCCCCCEeeeeEEEecc-EEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc----
Confidence            34444 99999999999999999998764 5789999999999999987655455555555566666666667664    


Q ss_pred             ecCcEEEEeEeeccch
Q psy8884          89 KEGNKVAIKNLKKSRI  104 (184)
Q Consensus        89 ~~g~~vavK~l~~~~~  104 (184)
                         ..++++.+++.++
T Consensus       123 ---~~ivHrDlKp~Ni  135 (276)
T d1uwha_         123 ---KSIIHRDLKSNNI  135 (276)
T ss_dssp             ---TTCCCSCCCGGGE
T ss_pred             ---CCEeccccCHHHE
Confidence               2344555555443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=3.5e-09  Score=77.36  Aligned_cols=85  Identities=11%  Similarity=0.185  Sum_probs=62.5

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecC
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEG   91 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   91 (184)
                      ...|+.++..++|+|++++.+++.+....+++||||++|++.+.+......++......+......+..|++.       
T Consensus        48 ~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~-------  120 (321)
T d1tkia_          48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS-------  120 (321)
T ss_dssp             HHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-------
Confidence            3459999999999999999999999999999999999999999887655445544444455555555555553       


Q ss_pred             cEEEEeEeeccc
Q psy8884          92 NKVAIKNLKKSR  103 (184)
Q Consensus        92 ~~vavK~l~~~~  103 (184)
                      ..++++.+++.+
T Consensus       121 ~~iiHrDlKp~N  132 (321)
T d1tkia_         121 HNIGHFDIRPEN  132 (321)
T ss_dssp             TTEECCCCCGGG
T ss_pred             cCCCcccccccc
Confidence            234455555544

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=3.1e-09  Score=75.30  Aligned_cols=76  Identities=21%  Similarity=0.426  Sum_probs=58.0

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.|.+ |+.++.+++|+|+++++|+|.+....++++|||++|++.+.+..............+......|..|++.
T Consensus        43 ~~~~~~-Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~  118 (258)
T d1k2pa_          43 EDEFIE-EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES  118 (258)
T ss_dssp             HHHHHH-HHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence            455666 9999999999999999999999999999999999999988876655444443444445555555555553

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=6.9e-09  Score=74.20  Aligned_cols=72  Identities=19%  Similarity=0.320  Sum_probs=53.1

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .|.+ |+.++.+++|+|++++.|+|.++ ..+++||||++|++.+.+.... .+++.....+......|..|++.
T Consensus        54 ~~~~-E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~  125 (277)
T d1xbba_          54 ELLA-EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE  125 (277)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHh
Confidence            3555 99999999999999999999664 4789999999999999887643 23333344455555555555553

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=9.2e-09  Score=73.32  Aligned_cols=86  Identities=22%  Similarity=0.320  Sum_probs=63.9

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeee
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLK   89 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (184)
                      -+.+ |+.++++++|+|++++.+++.+....+++||||++|++.+.+.... .++......++.....+..|++.     
T Consensus        49 ~~~~-Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~-----  121 (271)
T d1nvra_          49 NIKK-EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHG-----  121 (271)
T ss_dssp             CHHH-HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             HHHH-HHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHH-----
Confidence            3444 9999999999999999999999999999999999999999887543 33333333455555555556553     


Q ss_pred             cCcEEEEeEeeccch
Q psy8884          90 EGNKVAIKNLKKSRI  104 (184)
Q Consensus        90 ~g~~vavK~l~~~~~  104 (184)
                        ..++++.++++++
T Consensus       122 --~~IiHrDiKp~NI  134 (271)
T d1nvra_         122 --IGITHRDIKPENL  134 (271)
T ss_dssp             --TTEECSCCCGGGE
T ss_pred             --cCCccCcccHHHE
Confidence              3467777777665

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=7.9e-09  Score=73.68  Aligned_cols=88  Identities=22%  Similarity=0.324  Sum_probs=59.7

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc-Cccccccchhhhhhcccceeeecce
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMHDIVKFNGYLKTKE   86 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   86 (184)
                      .+.|.+ |+.++.+++|+|+++++|+|.++ ..++++|||++|++.+.+..... .+++-....+......|..|++.  
T Consensus        52 ~~~~~~-E~~~l~~l~HpnIv~~~g~~~~~-~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~--  127 (272)
T d1qpca_          52 PDAFLA-EANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE--  127 (272)
T ss_dssp             HHHHHH-HHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHH-HHHHHHhCCCCCEeEEEeeeccC-CeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            344656 99999999999999999998765 47899999999999887654321 23333334455555555555553  


Q ss_pred             eeecCcEEEEeEeeccch
Q psy8884          87 LLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~~  104 (184)
                           ..++++.++++++
T Consensus       128 -----~~ivHrDiKp~NI  140 (272)
T d1qpca_         128 -----RNYIHRDLRAANI  140 (272)
T ss_dssp             -----TTEECSCCSGGGE
T ss_pred             -----CCcccCccchhhe
Confidence                 2345555555444

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=6.6e-09  Score=73.78  Aligned_cols=84  Identities=17%  Similarity=0.342  Sum_probs=60.9

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.++++++|+|++++.+++.+....+++||||++|++.+.+.... .++......+......+..|++.       .
T Consensus        54 ~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~-------~  125 (263)
T d2j4za1          54 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS-------K  125 (263)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHH-------C
Confidence            349999999999999999999999999999999999999999887543 23333343445555555555553       2


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.++++++
T Consensus       126 ~ivHrDiKp~Ni  137 (263)
T d2j4za1         126 RVIHRDIKPENL  137 (263)
T ss_dssp             TCCCCCCCGGGE
T ss_pred             Ceeeeeeccccc
Confidence            345555555554

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.50  E-value=1.4e-08  Score=74.90  Aligned_cols=85  Identities=20%  Similarity=0.217  Sum_probs=63.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.++.+++|+|++++.+++.+.+..+++||||++|++.+.+......+.......++.....+..|++.       .
T Consensus        71 ~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~-------~  143 (350)
T d1koaa2          71 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE-------N  143 (350)
T ss_dssp             HHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-------c
Confidence            349999999999999999999999999999999999999999886544344444444555555555555553       3


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.++++++
T Consensus       144 ~iiHrDiKp~NI  155 (350)
T d1koaa2         144 NYVHLDLKPENI  155 (350)
T ss_dssp             TEECCCCCGGGE
T ss_pred             CCeeeeechhHe
Confidence            455666666554

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1.6e-08  Score=72.72  Aligned_cols=83  Identities=20%  Similarity=0.295  Sum_probs=59.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|+.++++++|+|++++.+++.+....++++|||++|++.+.+.... .++......++.....+..|++.       ..
T Consensus        62 ~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~-------~~  133 (293)
T d1jksa_          62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHS-------LQ  133 (293)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH-------TT
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhh-------cc
Confidence            39999999999999999999999999999999999999999887643 33333333444444444555543       23


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      ++++.+++.++
T Consensus       134 ivHrDiKp~Ni  144 (293)
T d1jksa_         134 IAHFDLKPENI  144 (293)
T ss_dssp             EECCCCSGGGE
T ss_pred             eeecccccceE
Confidence            44555554443

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.4e-08  Score=73.12  Aligned_cols=86  Identities=15%  Similarity=0.347  Sum_probs=64.0

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELL   88 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (184)
                      +.+.+ |+.++++++|+|++++++++.+.+..+++||||++|++.+.+....  ++......+......+..|++.    
T Consensus        62 ~~~~~-E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~--l~~~~~~~i~~qi~~aL~yLH~----  134 (293)
T d1yhwa1          62 ELIIN-EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHS----  134 (293)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHH----
Confidence            34444 9999999999999999999999999999999999999998776543  3333333455555555556654    


Q ss_pred             ecCcEEEEeEeeccch
Q psy8884          89 KEGNKVAIKNLKKSRI  104 (184)
Q Consensus        89 ~~g~~vavK~l~~~~~  104 (184)
                         ..++++.++++++
T Consensus       135 ---~~iiHrDiKp~NI  147 (293)
T d1yhwa1         135 ---NQVIHRDIKSDNI  147 (293)
T ss_dssp             ---TTEECCCCSGGGE
T ss_pred             ---CCCcccCCcHHHe
Confidence               3467777777665

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=6.5e-09  Score=74.55  Aligned_cols=74  Identities=16%  Similarity=0.270  Sum_probs=57.4

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .|.+ |+.++.+++|+|++++.|+|.+....++++|||.+|++.+.+......+.+.....+......|..|++.
T Consensus        55 ~~~~-E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~  128 (283)
T d1mqba_          55 DFLG-EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN  128 (283)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc
Confidence            4555 9999999999999999999999999999999999999988776654445554444555555555556553

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.8e-08  Score=73.61  Aligned_cols=49  Identities=27%  Similarity=0.565  Sum_probs=43.9

Q ss_pred             cchhhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          10 VFVPTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .+.+ |+.++.++ +|+||++++|+|.+.+..++++|||++|++.+.+...
T Consensus        86 ~~~~-E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_          86 ALMS-ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             HHHH-HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             HHHH-HHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhc
Confidence            3444 89999998 8999999999999999999999999999999998754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.47  E-value=2e-08  Score=74.13  Aligned_cols=84  Identities=19%  Similarity=0.269  Sum_probs=61.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|+.++.++.|+||+++++++.+....+++||||++|+|.+.+......++......++.....+..|++.       ..
T Consensus        75 ~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~-------~~  147 (352)
T d1koba_          75 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-------HS  147 (352)
T ss_dssp             HHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH-------TT
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-------CC
Confidence            49999999999999999999999999999999999999988776554445444444455555555555543       23


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      ++++.+++.++
T Consensus       148 iiHRDiKp~NI  158 (352)
T d1koba_         148 IVHLDIKPENI  158 (352)
T ss_dssp             EECCCCCGGGE
T ss_pred             eeecccccccc
Confidence            45555555543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=9e-09  Score=75.15  Aligned_cols=73  Identities=18%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      ..+.+ |+.++++++|+|++++.++|.+....++++|||++|++.+.+.+.. .+.......+......+..|++
T Consensus        49 ~~~~~-Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH  121 (322)
T d1s9ja_          49 NQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR  121 (322)
T ss_dssp             HHHHH-HGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            33444 9999999999999999999999999999999999999999887543 2333333333434444444444

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.45  E-value=1.5e-08  Score=73.52  Aligned_cols=73  Identities=15%  Similarity=0.187  Sum_probs=53.5

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.+ |+.++.++.|+|++++.+++.+.+..+++||||++|+|.+.+.... .+.......+......+..|++.
T Consensus        53 ~~~~-Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~  125 (307)
T d1a06a_          53 SMEN-EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHD  125 (307)
T ss_dssp             --CH-HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhh
Confidence            3444 9999999999999999999999999999999999999999887543 23333333444444444445443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.43  E-value=1.3e-07  Score=63.57  Aligned_cols=97  Identities=12%  Similarity=-0.026  Sum_probs=67.2

Q ss_pred             cchhhhhhcccceeeecceeeecCcEEEEeEeeccch------------------hhhHHHHHHHHHHHcCCCcchhhhh
Q psy8884          68 KNSLMHDIVKFNGYLKTKELLKEGNKVAIKNLKKSRI------------------DLTRPLLLELKRLKDLHHDHLVKFI  129 (184)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~e~~~l~~l~h~ni~~l~  129 (184)
                      +...++.|++|.||.+.   ..+|+.||+|.++....                  ........|...+..+.|.+++..+
T Consensus         4 vg~~IG~G~~g~Vy~a~---~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           4 IGKLMGEGKESAVFNCY---SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             EEEEEEECSSEEEEEEE---ETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             hCCEeeeCcceEEEEEE---CCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            45678999999999875   35789999998764321                  0112344677888899999988766


Q ss_pred             eeeecCCcEEEEEeecCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHhhh
Q psy8884         130 GACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMNKAAFNRVL  179 (184)
Q Consensus       130 ~~~~~~~~~~lv~e~~~~gsl~~~l~~~~~~l~~~~~~~i~~qi~~gl~~  179 (184)
                      +...    .+++|||++++.+..        ++......++.|++++++.
T Consensus        81 ~~~~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~  118 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAK  118 (191)
T ss_dssp             EEET----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHH
T ss_pred             EecC----CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHH
Confidence            5421    279999999865432        3334456788999999883

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1e-08  Score=73.09  Aligned_cols=88  Identities=24%  Similarity=0.285  Sum_probs=61.2

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTK   85 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
                      .|.+ |+.++++++|+|++++++++.+    ....+++||||++|++.+.+.... .++......+......+..|+|. 
T Consensus        54 ~~~~-E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~-  130 (270)
T d1t4ha_          54 RFKE-EAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT-  130 (270)
T ss_dssp             HHHH-HHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHH-HHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHH-
Confidence            3444 9999999999999999999854    345789999999999999887643 23333333445555555556553 


Q ss_pred             eeeecCcEEEEeEeeccch
Q psy8884          86 ELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        86 ~~~~~g~~vavK~l~~~~~  104 (184)
                          .+..++++.++++++
T Consensus       131 ----~~~~IiHrDiKp~NI  145 (270)
T d1t4ha_         131 ----RTPPIIHRDLKCDNI  145 (270)
T ss_dssp             ----SSSCCCCSCCCGGGE
T ss_pred             ----CCCCEEeCCcChhhc
Confidence                233467777777665

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.1e-08  Score=71.80  Aligned_cols=51  Identities=31%  Similarity=0.567  Sum_probs=45.0

Q ss_pred             cccchhhhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884           8 RQVFVPTAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ...|.+ |+.++.++ +|+||++++|+|.+.+..++++|||++|++.+.++..
T Consensus        54 ~~~~~~-E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          54 HRDFAG-ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             -CHHHH-HHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTT
T ss_pred             HHHHHH-HHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhc
Confidence            445666 99999999 6999999999999999999999999999999988754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=2e-08  Score=71.42  Aligned_cols=92  Identities=20%  Similarity=0.391  Sum_probs=57.9

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccC--CCceeEEeeecCCCchhhhhhhc---ccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLD--PPHCCLLTEYCPKGSLQDILENE---QFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~--~~~~~~~~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.+ |+.++.+++|+|++++.+++.+  ....+++||||++|++.+.+...   ...++......++.....+..|+|.
T Consensus        49 ~~~~-E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~  127 (269)
T d2java1          49 MLVS-EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR  127 (269)
T ss_dssp             HHHH-HHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3444 9999999999999999999865  34578999999999999988642   2234444444555556666666653


Q ss_pred             ceeeecCcEEEEeEeeccch
Q psy8884          85 KELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        85 ~~~~~~g~~vavK~l~~~~~  104 (184)
                      .  -..+..++++.++++++
T Consensus       128 ~--~~~~~~IiHrDiKp~NI  145 (269)
T d2java1         128 R--SDGGHTVLHRDLKPANV  145 (269)
T ss_dssp             H--CC---------CCGGGE
T ss_pred             h--cCCCCCEEeCcCchhhc
Confidence            1  01123578888888776

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=2.6e-08  Score=71.50  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=59.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.++.+++|+|++++.+++.+....+++||||++|++.+.+.... .++......+......+..|++.       .
T Consensus        56 ~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~-------~  127 (288)
T d1uu3a_          56 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG-------K  127 (288)
T ss_dssp             HHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhcc-------c
Confidence            349999999999999999999999999999999999999988776543 23332333334444444445443       3


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.++++++
T Consensus       128 ~iiHrDiKp~NI  139 (288)
T d1uu3a_         128 GIIHRDLKPENI  139 (288)
T ss_dssp             TEECSCCSGGGE
T ss_pred             cEEcCcCCcccc
Confidence            355666665554

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=2.5e-08  Score=71.54  Aligned_cols=75  Identities=25%  Similarity=0.338  Sum_probs=54.6

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhccc-Cccccccchhhhhhcccceeeec
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQF-KLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .+.|.+ |+.++++++|+||++++|+|.+. ..++++|||++|++.+.+..... .+++.....+......+..+++.
T Consensus        56 ~~~~~~-E~~~l~~l~h~nIv~~~g~~~~~-~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  131 (285)
T d1fmka3          56 PEAFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER  131 (285)
T ss_dssp             HHHHHH-HHHHHHHCCCTTBCCEEEEECSS-SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHhcccCCEeEEEEEEecC-CeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh
Confidence            445666 99999999999999999999664 57899999999999888775432 24444444555555555555543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=3.1e-08  Score=71.88  Aligned_cols=73  Identities=19%  Similarity=0.308  Sum_probs=54.1

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCC-CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~-~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|.+ |+.++.+++|+|+++++|+|.+. +..++++|||++|++.+.+..............+......|..+++
T Consensus        74 ~~~~-E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH  147 (311)
T d1r0pa_          74 QFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA  147 (311)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc
Confidence            3555 99999999999999999998764 5789999999999999988766555444433344444444444444

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.7e-08  Score=71.50  Aligned_cols=75  Identities=27%  Similarity=0.377  Sum_probs=52.2

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCC-CceeEEeeecCCCchhhhhhhcc-cCccccccchhhhhhcccceeee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~-~~~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .+.|.+ |++++++++|+|+++++|+|.+. +..++++|||++|++.+.+.... ..+++.....+......+..|++
T Consensus        44 ~~~~~~-E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH  120 (262)
T d1byga_          44 AQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE  120 (262)
T ss_dssp             -HHHHH-THHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc
Confidence            344555 99999999999999999999764 45789999999999999986532 12333333344444444444544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.31  E-value=2.8e-08  Score=72.06  Aligned_cols=85  Identities=18%  Similarity=0.332  Sum_probs=59.8

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeec
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      +.+ |+.++.+++|+||+++.+++.+.+..++++|||++|++...+.... .++......+......|..|+|.      
T Consensus        62 ~~~-Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~------  133 (309)
T d1u5ra_          62 IIK-EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHS------  133 (309)
T ss_dssp             HHH-HHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHH-HHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHh------
Confidence            444 9999999999999999999999999999999999998866554332 34444444555555555656654      


Q ss_pred             CcEEEEeEeeccch
Q psy8884          91 GNKVAIKNLKKSRI  104 (184)
Q Consensus        91 g~~vavK~l~~~~~  104 (184)
                       ..++++.++++++
T Consensus       134 -~~iiHrDiKp~NI  146 (309)
T d1u5ra_         134 -HNMIHRDVKAGNI  146 (309)
T ss_dssp             -TTCBCCCCSGGGE
T ss_pred             -CCEeccCCCcceE
Confidence             2244555555544

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=8.5e-08  Score=68.25  Aligned_cols=73  Identities=26%  Similarity=0.387  Sum_probs=53.5

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      -|.+ |+.++.+++|+|++++.|+|.++ ..++++|||+.|++.+.+......+..-....+......|..|++.
T Consensus        57 ~~~~-Ei~~l~~l~H~nIv~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  129 (273)
T d1u46a_          57 DFIR-EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES  129 (273)
T ss_dssp             HHHH-HHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEEEEEEEEeec-chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            3444 89999999999999999999775 5789999999999988776544334444444555555555555553

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.8e-08  Score=69.48  Aligned_cols=74  Identities=20%  Similarity=0.415  Sum_probs=53.4

Q ss_pred             ccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884           9 QVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus         9 ~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      ..|.+ |+.++++++|+|++++.|+|.+ +..++++|||++|++.+.+......++.-....+......|..|++.
T Consensus        53 ~~~~~-E~~~l~~l~HpnIv~l~~~~~~-~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  126 (273)
T d1mp8a_          53 EKFLQ-EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES  126 (273)
T ss_dssp             HHHHH-HHHHHHTCCCTTBCCEEEEECS-SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHhCCCCCEeeEEEEEec-CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc
Confidence            34555 9999999999999999999975 55899999999999988776655444443444444444444445443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.18  E-value=2e-07  Score=66.38  Aligned_cols=71  Identities=15%  Similarity=0.219  Sum_probs=53.1

Q ss_pred             chhhhhhhhhhcC-CCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          11 FVPTAFYKLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        11 ~~~~~~~~l~~l~-h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      +.+ |+.+++++. |+|++++++++.++...+++||||++|++.+.+.... .++.-....+......+..|++
T Consensus        56 ~~~-E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH  127 (277)
T d1phka_          56 TLK-EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH  127 (277)
T ss_dssp             HHH-HHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            444 999999997 9999999999999999999999999999999987544 3333333344444444444444

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.3e-07  Score=68.61  Aligned_cols=73  Identities=21%  Similarity=0.394  Sum_probs=54.3

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeec
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKT   84 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (184)
                      .|.+ |+.++.+++|+|+++++|+|.++. .+++++||..|++.+.+......++......+......|..|++.
T Consensus        57 ~~~~-E~~~l~~l~HpnIv~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~  129 (317)
T d1xkka_          57 EILD-EAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  129 (317)
T ss_dssp             HHHH-HHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCEeeEEEEEecCC-eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3555 999999999999999999998865 677889999999988877665555544444455555555555553

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.5e-07  Score=68.08  Aligned_cols=48  Identities=19%  Similarity=0.401  Sum_probs=43.6

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhh
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILEN   58 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~   58 (184)
                      .|.+ |+.+++++.|+|++++.|+|.+.+..++++|||++|++.+.+..
T Consensus        69 ~~~~-E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_          69 EFLN-EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             HHHH-HHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HHHH-HHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHh
Confidence            3445 99999999999999999999999999999999999999988764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=4.3e-07  Score=65.87  Aligned_cols=83  Identities=17%  Similarity=0.276  Sum_probs=58.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|..++++++|+|++++.+++.+.+..+++||||++|++...+...... ..-....+......+..+++.       ..
T Consensus        53 ~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~-~~~~~~~~~~qi~~al~~lH~-------~~  124 (316)
T d1fota_          53 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-PNPVAKFYAAEVCLALEYLHS-------KD  124 (316)
T ss_dssp             HHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSC-CHHHHHHHHHHHHHHHHHHHT-------TT
T ss_pred             HHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccc-cccHHHHHHHHHHHhhhhhcc-------Cc
Confidence            4899999999999999999999999999999999999998877654422 111222233334344444443       34


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      ++++.++++++
T Consensus       125 iiHrDiKp~NI  135 (316)
T d1fota_         125 IIYRDLKPENI  135 (316)
T ss_dssp             EECCCCCGGGE
T ss_pred             EEccccCchhe
Confidence            66666666655

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=2.6e-07  Score=66.62  Aligned_cols=90  Identities=21%  Similarity=0.204  Sum_probs=57.7

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCC----ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecce-e
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKE-L   87 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   87 (184)
                      ..|+..+.+++|+||++++|+|.+..    ..++++|||++|++.+.+++....  +-....+......|..+.+... .
T Consensus        45 e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~l~--~~~~~~~~~~ia~gl~~lH~~~~~  122 (303)
T d1vjya_          45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT--VEGMIKLALSTASGLAHLHMEIVG  122 (303)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBC--HHHHHHHHHHHHHHHHHHHCCBCS
T ss_pred             HHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCCCC--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence            34667778899999999999997653    578999999999999999875432  2222233434444444443210 0


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                      ......++++.++++++
T Consensus       123 ~~~~~~IvHrDlKp~NI  139 (303)
T d1vjya_         123 TQGKPAIAHRDLKSKNI  139 (303)
T ss_dssp             TTCBCEEECSCCCGGGE
T ss_pred             hccCCCeeccccCccce
Confidence            01124566666666654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=2.7e-07  Score=66.73  Aligned_cols=46  Identities=30%  Similarity=0.542  Sum_probs=42.0

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+.++.++ .|+|++++.|+|.+.+..++++|||++|++.+.+...
T Consensus        75 ~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_          75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             HHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhc
Confidence            488999999 6999999999999999999999999999999988753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=3.6e-07  Score=66.86  Aligned_cols=84  Identities=21%  Similarity=0.247  Sum_probs=58.0

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.+++++.|+|++++.+++.+....++++|||++|++.+.+..... +..-....+......+..|++.       .
T Consensus        53 ~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~-~~e~~~~~~~~qil~al~ylH~-------~  124 (337)
T d1o6la_          53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHS-------R  124 (337)
T ss_dssp             HHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccC-CcHHHHHHHHHHHhhhhhhhhh-------c
Confidence            3499999999999999999999999999999999999999988876442 2222222333333334444443       3


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.++++++
T Consensus       125 ~iiHRDlKP~NI  136 (337)
T d1o6la_         125 DVVYRDIKLENL  136 (337)
T ss_dssp             TCBCCCCCGGGE
T ss_pred             CccccccCHHHe
Confidence            345555555544

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.1e-07  Score=66.02  Aligned_cols=89  Identities=13%  Similarity=0.196  Sum_probs=59.6

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      ...+.+ |+.++++++|+|++++.+++.++...++++|||..+............+.......+......+..|++.   
T Consensus        45 ~~~~~~-Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---  120 (298)
T d1gz8a_          45 PSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---  120 (298)
T ss_dssp             CHHHHH-HHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHH-HHHHHHhCCCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---
Confidence            344455 9999999999999999999999999999999997554433333333334444444555555555556553   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..++++.++++++
T Consensus       121 ----~~IiHrDiKpeNI  133 (298)
T d1gz8a_         121 ----HRVLHRDLKPQNL  133 (298)
T ss_dssp             ----TTCCCSCCCGGGE
T ss_pred             ----CCEEccccCchhe
Confidence                2355555655554

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=5e-07  Score=64.89  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=55.7

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|+.++++++|+|++++.+++.+....+++||||.++.+....... ..+.......+......+..|++.       ..
T Consensus        49 ~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~-------~~  120 (299)
T d1ua2a_          49 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQ-------HW  120 (299)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHH-------TT
T ss_pred             HHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhc-------cc
Confidence            3999999999999999999999999999999999887766554432 233333333444444444445443       23


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      ++++.++++++
T Consensus       121 iiHrDiKp~NI  131 (299)
T d1ua2a_         121 ILHRDLKPNNL  131 (299)
T ss_dssp             CCCCCCCGGGE
T ss_pred             eecccCCcceE
Confidence            44555555443

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.95  E-value=1e-06  Score=65.07  Aligned_cols=82  Identities=13%  Similarity=0.081  Sum_probs=55.3

Q ss_pred             hhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcEE
Q psy8884          15 AFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNKV   94 (184)
Q Consensus        15 ~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v   94 (184)
                      ++..+..+.|+|++++.+++.+.+..+++||||++|++.+.+.... .+..-....+......+..|++.       ..+
T Consensus        57 ~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~-------~~i  128 (364)
T d1omwa3          57 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN-------RFV  128 (364)
T ss_dssp             HHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH-------TTE
T ss_pred             HHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHH-------CCc
Confidence            3566777889999999999999999999999999999999887643 22222222333334444445443       334


Q ss_pred             EEeEeeccch
Q psy8884          95 AIKNLKKSRI  104 (184)
Q Consensus        95 avK~l~~~~~  104 (184)
                      +++.++++++
T Consensus       129 iHrDlKP~NI  138 (364)
T d1omwa3         129 VYRDLKPANI  138 (364)
T ss_dssp             ECCCCSGGGE
T ss_pred             cceeecccee
Confidence            5555555544

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.94  E-value=8.7e-07  Score=63.71  Aligned_cols=49  Identities=27%  Similarity=0.499  Sum_probs=44.2

Q ss_pred             cchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          10 VFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      -|.+ |+.++++++|+|++++.++|.+....++++|||++|++.+.+...
T Consensus        62 ~~~~-E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~  110 (301)
T d1lufa_          62 DFQR-EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM  110 (301)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHHH-HHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhc
Confidence            3444 999999999999999999999999999999999999999988653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=6.1e-07  Score=63.72  Aligned_cols=85  Identities=18%  Similarity=0.245  Sum_probs=57.4

Q ss_pred             chhhhhhhhhhcCCCCcceeeccccCCC----ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecce
Q psy8884          11 FVPTAFYKLKDLHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKE   86 (184)
Q Consensus        11 ~~~~~~~~l~~l~h~n~~~~~g~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (184)
                      |.+ |+.++++++|+|++++.+++.+..    ..+++||||+++++.+.+.... .++......++.....+..+++.  
T Consensus        54 ~~~-E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~--  129 (277)
T d1o6ya_          54 FRR-EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ--  129 (277)
T ss_dssp             HHH-HHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHH-HHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHh--
Confidence            444 999999999999999999986643    3789999999999988776543 23333333445555555555553  


Q ss_pred             eeecCcEEEEeEeeccch
Q psy8884          87 LLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~~  104 (184)
                           ..++++.++++++
T Consensus       130 -----~~iiHrDiKP~NI  142 (277)
T d1o6ya_         130 -----NGIIHRDVKPANI  142 (277)
T ss_dssp             -----TTEECCCCSGGGE
T ss_pred             -----CCccCccccCccc
Confidence                 2345555555543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=8.7e-07  Score=63.67  Aligned_cols=46  Identities=24%  Similarity=0.582  Sum_probs=41.3

Q ss_pred             hhhhhhhhc-CCCCcceeeccccCCCceeEEeeecCCCchhhhhhhc
Q psy8884          14 TAFYKLKDL-HHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        14 ~~~~~l~~l-~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      .|+..+.++ +|+||+++.|+|.+.+..++++|||++|++.+.+...
T Consensus        67 ~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~  113 (299)
T d1fgka_          67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR  113 (299)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTT
T ss_pred             HHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhh
Confidence            377778888 7999999999999999999999999999999988654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=9.6e-07  Score=64.50  Aligned_cols=84  Identities=13%  Similarity=0.151  Sum_probs=55.2

Q ss_pred             hhhhhhhhhc-CCCCcceeeccccC----CCceeEEeeecCCCchhhhhhhcc-cCccccccchhhhhhcccceeeecce
Q psy8884          13 PTAFYKLKDL-HHDHLVKFIGACLD----PPHCCLLTEYCPKGSLQDILENEQ-FKLEPMFKNSLMHDIVKFNGYLKTKE   86 (184)
Q Consensus        13 ~~~~~~l~~l-~h~n~~~~~g~~~~----~~~~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (184)
                      +.|+.++.++ .|+|++++++++.+    ....+++||||++|+|.+.+.... ..++......++.....+..|+|.  
T Consensus        52 ~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~--  129 (335)
T d2ozaa1          52 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--  129 (335)
T ss_dssp             HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH--
Confidence            3488887665 79999999998854    356899999999999999987542 233433344444444444545543  


Q ss_pred             eeecCcEEEEeEeeccc
Q psy8884          87 LLKEGNKVAIKNLKKSR  103 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~  103 (184)
                           ..++++.+++++
T Consensus       130 -----~~iiHRDiKp~N  141 (335)
T d2ozaa1         130 -----INIAHRDVKPEN  141 (335)
T ss_dssp             -----TTEECCCCSGGG
T ss_pred             -----cCCccccccccc
Confidence                 234445555444

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=3.1e-06  Score=62.08  Aligned_cols=83  Identities=18%  Similarity=0.210  Sum_probs=60.4

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCcE
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGNK   93 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   93 (184)
                      .|+.++.++.|+|++++.+++.+....++++|||.+|++.+.+.... .++.-....++.....+..|+|.       ..
T Consensus        90 ~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~-------~~  161 (350)
T d1rdqe_          90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-------LD  161 (350)
T ss_dssp             HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH-------TT
T ss_pred             HHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHh-------CC
Confidence            48999999999999999999999999999999999999988876543 23333333444444445555553       34


Q ss_pred             EEEeEeeccch
Q psy8884          94 VAIKNLKKSRI  104 (184)
Q Consensus        94 vavK~l~~~~~  104 (184)
                      ++++.+++.++
T Consensus       162 iiHRDIKP~NI  172 (350)
T d1rdqe_         162 LIYRDLKPENL  172 (350)
T ss_dssp             EECCCCSGGGE
T ss_pred             EecCcCCHHHc
Confidence            66666666654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=2.6e-06  Score=61.77  Aligned_cols=68  Identities=15%  Similarity=0.139  Sum_probs=47.5

Q ss_pred             hhhhhh-hcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          15 AFYKLK-DLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        15 ~~~~l~-~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      |..++. .+.|+|++++.+++.++...++++|||++|++.+.+.... .++......+......+..|++
T Consensus        52 e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH  120 (320)
T d1xjda_          52 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH  120 (320)
T ss_dssp             HHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            445454 6899999999999999999999999999999999887543 2222222233333444444444

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=97.59  E-value=4.7e-06  Score=59.22  Aligned_cols=88  Identities=18%  Similarity=0.194  Sum_probs=59.2

Q ss_pred             cccchhhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884           8 RQVFVPTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      ...+.+ |+.++++++|+|++++.+.+.+.+..+++++++..+.+....... ..++......+......+..+++.   
T Consensus        44 ~~~~~~-E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---  118 (286)
T d1ob3a_          44 PSTTIR-EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD---  118 (286)
T ss_dssp             CHHHHH-HHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHH-HHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhcc---
Confidence            334555 999999999999999999999999999999999776665554433 234444444445455555555553   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..++++.++++++
T Consensus       119 ----~~IvHrDiKp~NI  131 (286)
T d1ob3a_         119 ----RRVLHRDLKPQNL  131 (286)
T ss_dssp             ----TTCCCSCCCGGGE
T ss_pred             ----CcEEecCCCCcee
Confidence                2345555555544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=2.4e-05  Score=57.17  Aligned_cols=86  Identities=12%  Similarity=0.214  Sum_probs=54.6

Q ss_pred             hhhhhhhhhhcCCCCcceeeccccCC------CceeEEeeecCCCchhhhhh--hcccCccccccchhhhhhcccceeee
Q psy8884          12 VPTAFYKLKDLHHDHLVKFIGACLDP------PHCCLLTEYCPKGSLQDILE--NEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        12 ~~~~~~~l~~l~h~n~~~~~g~~~~~------~~~~~~~e~~~~~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .+.|+.++++++|+|++++.+++.+.      ...++++|||+.+.......  .....++......+......|..|++
T Consensus        60 ~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH  139 (350)
T d1q5ka_          60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH  139 (350)
T ss_dssp             CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34599999999999999999998543      34689999998765443332  12223333333344545555555655


Q ss_pred             cceeeecCcEEEEeEeeccch
Q psy8884          84 TKELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        84 ~~~~~~~g~~vavK~l~~~~~  104 (184)
                      .       ..++++.++++++
T Consensus       140 ~-------~~IiHrDiKp~NI  153 (350)
T d1q5ka_         140 S-------FGICHRDIKPQNL  153 (350)
T ss_dssp             T-------TTEECCCCCGGGE
T ss_pred             h-------cCCcccCCCcceE
Confidence            3       4466666666665

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=1.9e-05  Score=56.39  Aligned_cols=45  Identities=29%  Similarity=0.619  Sum_probs=37.2

Q ss_pred             hhhhhhhc-CCCCcceeeccccCC-CceeEEeeecCCCchhhhhhhc
Q psy8884          15 AFYKLKDL-HHDHLVKFIGACLDP-PHCCLLTEYCPKGSLQDILENE   59 (184)
Q Consensus        15 ~~~~l~~l-~h~n~~~~~g~~~~~-~~~~~~~e~~~~~~l~~~l~~~   59 (184)
                      ++..+.++ +|+|++.+.++|.+. ...++++|||++|++.+.+...
T Consensus        66 e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          66 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             HHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            66677777 678999999998765 4578999999999999998754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=1.9e-05  Score=55.94  Aligned_cols=84  Identities=19%  Similarity=0.336  Sum_probs=56.4

Q ss_pred             hhhhhhhhhcCCCCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecCc
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEGN   92 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   92 (184)
                      ..|+.+++++.|+|++++.++|.+....+++++++.++.+...+.... .........+......+..|++.       .
T Consensus        49 ~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH~-------~  120 (292)
T d1unla_          49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHS-------R  120 (292)
T ss_dssp             HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHH-------T
T ss_pred             HHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccccc-ccchhHHHHHHHHHHHHHHHhhc-------C
Confidence            349999999999999999999999999999999998888877665432 22222233334444444444443       2


Q ss_pred             EEEEeEeeccch
Q psy8884          93 KVAIKNLKKSRI  104 (184)
Q Consensus        93 ~vavK~l~~~~~  104 (184)
                      .++++.++++++
T Consensus       121 ~IvHrDiKP~NI  132 (292)
T d1unla_         121 NVLHRDLKPQNL  132 (292)
T ss_dssp             TEECCCCSGGGE
T ss_pred             CEeeecccCccc
Confidence            345555555443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=1.9e-05  Score=57.14  Aligned_cols=50  Identities=18%  Similarity=0.157  Sum_probs=43.5

Q ss_pred             cchhhhhhhhhhcCC-CCcceeeccccCCCceeEEeeecCCCchhhhhhhcc
Q psy8884          10 VFVPTAFYKLKDLHH-DHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQ   60 (184)
Q Consensus        10 ~~~~~~~~~l~~l~h-~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~   60 (184)
                      .+.+ |+.++.++.| +|++++.+++.+....++++|||.+|++.+.+....
T Consensus        74 ~~~~-E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~  124 (322)
T d1vzoa_          74 HTRT-ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE  124 (322)
T ss_dssp             GCCC-HHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS
T ss_pred             HHHH-HHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcc
Confidence            3444 9999999977 699999999999999999999999999998887544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=3.9e-05  Score=54.06  Aligned_cols=83  Identities=14%  Similarity=0.202  Sum_probs=54.0

Q ss_pred             hhhhhhhhcC--CCCcceeeccccCCCceeEEeeecCC-CchhhhhhhcccCccccccchhhhhhcccceeeecceeeec
Q psy8884          14 TAFYKLKDLH--HDHLVKFIGACLDPPHCCLLTEYCPK-GSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        14 ~~~~~l~~l~--h~n~~~~~g~~~~~~~~~~~~e~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      .|+.++.++.  |+|++++.+++.+....++++||+.. +++.+.+.... .++.-....+......+..+++.      
T Consensus        56 ~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~------  128 (273)
T d1xwsa_          56 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN------  128 (273)
T ss_dssp             HHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH------
Confidence            4999999997  89999999999999999999999976 46666665432 23332333334444444444443      


Q ss_pred             CcEEEEeEeeccch
Q psy8884          91 GNKVAIKNLKKSRI  104 (184)
Q Consensus        91 g~~vavK~l~~~~~  104 (184)
                       ..++++.++++++
T Consensus       129 -~~iiHrDiKp~NI  141 (273)
T d1xwsa_         129 -CGVLHRDIKDENI  141 (273)
T ss_dssp             -TTEECSCCSGGGE
T ss_pred             -CCCccccCcccce
Confidence             2345555555544

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=8e-05  Score=54.15  Aligned_cols=82  Identities=15%  Similarity=0.211  Sum_probs=56.2

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC----ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP----HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLK   89 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (184)
                      .|+.+|.++.|+|++++.++|....    ..+.+++|+.+|++.+.+....+  .......+......+..|++.     
T Consensus        55 ~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~~l--~~~~i~~i~~qil~al~yLH~-----  127 (345)
T d1pmea_          55 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHL--SNDHICYFLYQILRGLKYIHS-----  127 (345)
T ss_dssp             HHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcCCC--CHHHHHHHHHHHHHHHHHHHH-----
Confidence            3999999999999999999987643    23455677889999999876543  333333445455445555553     


Q ss_pred             cCcEEEEeEeeccch
Q psy8884          90 EGNKVAIKNLKKSRI  104 (184)
Q Consensus        90 ~g~~vavK~l~~~~~  104 (184)
                        ..++++.++++++
T Consensus       128 --~~iiHRDIKp~NI  140 (345)
T d1pmea_         128 --ANVLHRDLKPSNL  140 (345)
T ss_dssp             --TTEECCCCCGGGE
T ss_pred             --CCCcCCCCCcceE
Confidence              3466677777665

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=7.5e-05  Score=54.28  Aligned_cols=81  Identities=14%  Similarity=0.269  Sum_probs=51.9

Q ss_pred             hhhhhhhhcCCCCcceeeccccCCC------ceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeeccee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDPP------HCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKEL   87 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~~------~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (184)
                      .|+.+|.++.|+|++++.++|.+.+      ..++++||| .+++........+  +......+......+..+++.   
T Consensus        66 ~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l--~~~~~~~~~~qi~~aL~~LH~---  139 (346)
T d1cm8a_          66 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKL--GEDRIQFLVYQMLKGLRYIHA---  139 (346)
T ss_dssp             HHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHhccc--cHHHHHHHHHHHHHHHHHHHh---
Confidence            4999999999999999999997654      469999999 4566666554432  333333344444444445443   


Q ss_pred             eecCcEEEEeEeeccch
Q psy8884          88 LKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        88 ~~~g~~vavK~l~~~~~  104 (184)
                          ..++++.+++.++
T Consensus       140 ----~~IiHrDiKp~NI  152 (346)
T d1cm8a_         140 ----AGIIHRDLKPGNL  152 (346)
T ss_dssp             ----TTEECCCCCGGGE
T ss_pred             ----CCCcccccCcchh
Confidence                2345555555443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.00  E-value=9.6e-05  Score=53.26  Aligned_cols=80  Identities=14%  Similarity=0.199  Sum_probs=52.0

Q ss_pred             hhhhhhhhcC-CCCcceeeccccC--CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeec
Q psy8884          14 TAFYKLKDLH-HDHLVKFIGACLD--PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKE   90 (184)
Q Consensus        14 ~~~~~l~~l~-h~n~~~~~g~~~~--~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (184)
                      .|+.+|.++. |+|++++.+++..  ....++++|||..+++......    +.......+......+..+++.      
T Consensus        78 ~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----l~e~~i~~i~~qil~aL~~LH~------  147 (328)
T d3bqca1          78 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS------  147 (328)
T ss_dssp             HHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTTS----CCHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhcC----CCHHHHHHHHHHHHHHHHHHhh------
Confidence            4999999995 9999999999864  3568899999999998765432    2222333344444444445543      


Q ss_pred             CcEEEEeEeeccch
Q psy8884          91 GNKVAIKNLKKSRI  104 (184)
Q Consensus        91 g~~vavK~l~~~~~  104 (184)
                       ..+++..++++++
T Consensus       148 -~gIvHrDiKp~NI  160 (328)
T d3bqca1         148 -MGIMHRDVKPHNV  160 (328)
T ss_dssp             -TTEECCCCSGGGE
T ss_pred             -cccccccccccce
Confidence             2345555555544

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=8.3e-05  Score=53.00  Aligned_cols=83  Identities=16%  Similarity=0.245  Sum_probs=51.1

Q ss_pred             hhhhhhhc---CCCCcceeeccccC-----CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecce
Q psy8884          15 AFYKLKDL---HHDHLVKFIGACLD-----PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKE   86 (184)
Q Consensus        15 ~~~~l~~l---~h~n~~~~~g~~~~-----~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (184)
                      |+.+++.|   .|+|+++++++|..     ....++++|||..+.+..........++......++.....+..|++.  
T Consensus        57 E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~--  134 (305)
T d1blxa_          57 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS--  134 (305)
T ss_dssp             HHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            77776666   79999999999853     346799999998887654443333333333333445445555555553  


Q ss_pred             eeecCcEEEEeEeeccch
Q psy8884          87 LLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        87 ~~~~g~~vavK~l~~~~~  104 (184)
                           ..++++.++++++
T Consensus       135 -----~~ivHrDiKp~NI  147 (305)
T d1blxa_         135 -----HRVVHRDLKPQNI  147 (305)
T ss_dssp             -----TTCCCCCCCGGGE
T ss_pred             -----CCEEecCCCccEE
Confidence                 2345555555554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00012  Score=52.41  Aligned_cols=83  Identities=17%  Similarity=0.260  Sum_probs=51.0

Q ss_pred             hhhhhhhhcCCCCcceeeccccC--------CCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecc
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLD--------PPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTK   85 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~--------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
                      .|+.++++++|+|++++.+++.+        ....++++|||..+.+........ .........+......+..|++. 
T Consensus        58 ~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~-~~~~~~~~~i~~qil~~l~~lH~-  135 (318)
T d3blha1          58 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHR-  135 (318)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTC-CCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccc-ccccHHHHHHHHHHHHHHHHhcc-
Confidence            49999999999999999999855        345789999998776654433221 22222222333334444445443 


Q ss_pred             eeeecCcEEEEeEeeccch
Q psy8884          86 ELLKEGNKVAIKNLKKSRI  104 (184)
Q Consensus        86 ~~~~~g~~vavK~l~~~~~  104 (184)
                            ..++++.++++++
T Consensus       136 ------~~ivHrDlKp~NI  148 (318)
T d3blha1         136 ------NKILHRDMKAANV  148 (318)
T ss_dssp             ------TTEECCCCCGGGE
T ss_pred             ------CCEEecCcCchhe
Confidence                  3456666666554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=9.1e-05  Score=53.77  Aligned_cols=68  Identities=13%  Similarity=0.209  Sum_probs=46.6

Q ss_pred             hhhhhhhhcCCCCcceeeccccCC-----CceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeee
Q psy8884          14 TAFYKLKDLHHDHLVKFIGACLDP-----PHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLK   83 (184)
Q Consensus        14 ~~~~~l~~l~h~n~~~~~g~~~~~-----~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (184)
                      .|+.++.++.|+|++++.+++...     ...+++++|+.+|+|.+.+....+  +......++.....+..+++
T Consensus        66 ~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l--~e~~~~~i~~qil~aL~~LH  138 (348)
T d2gfsa1          66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIH  138 (348)
T ss_dssp             HHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccc--cHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999988543     334667788889999998876543  33333334444444444444

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.60  E-value=0.00038  Score=49.26  Aligned_cols=84  Identities=12%  Similarity=0.087  Sum_probs=57.1

Q ss_pred             hhhhhhhhhcCC-CCcceeeccccCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecC
Q psy8884          13 PTAFYKLKDLHH-DHLVKFIGACLDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEG   91 (184)
Q Consensus        13 ~~~~~~l~~l~h-~n~~~~~g~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   91 (184)
                      +.|+.++..+.| +|++.+.+++.+....++++||| .+++.+.+......+.......+......+..+++.       
T Consensus        48 ~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~-------  119 (293)
T d1csna_          48 RDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE-------  119 (293)
T ss_dssp             HHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT-------
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH-------
Confidence            448999999976 78999999999999999999999 688888877654344444343444444444444443       


Q ss_pred             cEEEEeEeeccch
Q psy8884          92 NKVAIKNLKKSRI  104 (184)
Q Consensus        92 ~~vavK~l~~~~~  104 (184)
                      ..++++.+++.++
T Consensus       120 ~giiHrDiKp~Ni  132 (293)
T d1csna_         120 KSLVYRDIKPDNF  132 (293)
T ss_dssp             TTEECCCCCGGGE
T ss_pred             CCceeccCCccce
Confidence            3355555655554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00019  Score=52.29  Aligned_cols=41  Identities=12%  Similarity=0.162  Sum_probs=33.8

Q ss_pred             hhhhhhhhhcCCCCcceeeccccC------CCceeEEeeecCCCchh
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGACLD------PPHCCLLTEYCPKGSLQ   53 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~~~------~~~~~~~~e~~~~~~l~   53 (184)
                      ..|+.++++++|+|++++.+++..      ....++++|||..+.+.
T Consensus        64 ~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~  110 (355)
T d2b1pa1          64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ  110 (355)
T ss_dssp             HHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHH
Confidence            349999999999999999999864      35789999999665443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.99  E-value=0.0012  Score=46.55  Aligned_cols=84  Identities=13%  Similarity=0.103  Sum_probs=51.1

Q ss_pred             hhhhhhhhhcCCCCcceeeccc-cCCCceeEEeeecCCCchhhhhhhcccCccccccchhhhhhcccceeeecceeeecC
Q psy8884          13 PTAFYKLKDLHHDHLVKFIGAC-LDPPHCCLLTEYCPKGSLQDILENEQFKLEPMFKNSLMHDIVKFNGYLKTKELLKEG   91 (184)
Q Consensus        13 ~~~~~~l~~l~h~n~~~~~g~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   91 (184)
                      ..|+.++.++.|+|++..+..| .+.+..++++||| .+++.+.+......++......+......+..+++.       
T Consensus        50 ~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-------  121 (299)
T d1ckia_          50 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS-------  121 (299)
T ss_dssp             HHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHH-------
Confidence            3489999999888766555444 6677888999998 455555554433334443444444444444545543       


Q ss_pred             cEEEEeEeeccch
Q psy8884          92 NKVAIKNLKKSRI  104 (184)
Q Consensus        92 ~~vavK~l~~~~~  104 (184)
                      ..++++.++++++
T Consensus       122 ~~iiHrDiKp~NI  134 (299)
T d1ckia_         122 KNFIHRDVKPDNF  134 (299)
T ss_dssp             TTEECSCCCGGGE
T ss_pred             CCeeeccCCHhhc
Confidence            3356666666654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.88  E-value=0.023  Score=38.62  Aligned_cols=67  Identities=13%  Similarity=-0.058  Sum_probs=46.3

Q ss_pred             ecCcEEEEeEeeccchhhhHHHHHHHHHHHcCC-CcchhhhheeeecCCcEEEEEeecCCCCHHHHHh
Q psy8884          89 KEGNKVAIKNLKKSRIDLTRPLLLELKRLKDLH-HDHLVKFIGACLDPPHCCLLTEYCPKGSLQDILE  155 (184)
Q Consensus        89 ~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~ni~~l~~~~~~~~~~~lv~e~~~~gsl~~~l~  155 (184)
                      ..+..+.+|............+.+|...+..+. +--+.+++.....++..+++|+++++.++.+...
T Consensus        35 ~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~  102 (263)
T d1j7la_          35 GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE  102 (263)
T ss_dssp             CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTT
T ss_pred             eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccc
Confidence            456678888876554433445677887776653 3335566666667788899999999988876543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=85.25  E-value=2.3  Score=27.91  Aligned_cols=58  Identities=17%  Similarity=0.049  Sum_probs=38.4

Q ss_pred             cCcEEEEeEeeccchhhhHHHHHHHHHHHcCCC--cchhhhheeeecCCcEEEEEeecCCCCH
Q psy8884          90 EGNKVAIKNLKKSRIDLTRPLLLELKRLKDLHH--DHLVKFIGACLDPPHCCLLTEYCPKGSL  150 (184)
Q Consensus        90 ~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h--~ni~~l~~~~~~~~~~~lv~e~~~~gsl  150 (184)
                      .+..+.+|.-....   ...+..|...++.+..  -.+.+++....+++..+++|++++|.++
T Consensus        34 ~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          34 GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             CCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            45567888766543   2235566666665532  2355667777777888999999988654