Query psy889
Match_columns 167
No_of_seqs 107 out of 1174
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 22:01:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.8 3.4E-19 1.2E-23 138.4 10.0 112 1-163 72-185 (261)
2 1vl5_A Unknown conserved prote 99.8 8.7E-19 3E-23 134.8 9.4 108 1-162 39-146 (260)
3 3dh0_A SAM dependent methyltra 99.8 5.9E-18 2E-22 126.7 10.5 110 1-161 39-148 (219)
4 1xxl_A YCGJ protein; structura 99.7 5.8E-18 2E-22 129.0 9.8 108 1-162 23-130 (239)
5 4hg2_A Methyltransferase type 99.7 1.1E-18 3.9E-23 135.2 5.8 99 2-161 42-140 (257)
6 2o57_A Putative sarcosine dime 99.7 9.9E-18 3.4E-22 131.2 10.4 109 1-161 84-192 (297)
7 1nkv_A Hypothetical protein YJ 99.7 5.8E-18 2E-22 129.5 8.7 106 1-159 38-143 (256)
8 3bus_A REBM, methyltransferase 99.7 1.3E-17 4.6E-22 128.8 9.8 108 1-160 63-170 (273)
9 3f4k_A Putative methyltransfer 99.7 2.1E-17 7.2E-22 126.5 9.8 105 1-158 48-152 (257)
10 3dlc_A Putative S-adenosyl-L-m 99.7 1.8E-17 6.1E-22 123.4 9.0 105 2-158 46-150 (219)
11 3g5t_A Trans-aconitate 3-methy 99.7 2.1E-17 7.3E-22 129.7 9.1 109 1-160 38-153 (299)
12 1pjz_A Thiopurine S-methyltran 99.7 1.1E-17 3.7E-22 124.9 6.8 116 1-158 24-142 (203)
13 2p8j_A S-adenosylmethionine-de 99.7 3.4E-17 1.2E-21 121.6 9.4 109 1-163 25-135 (209)
14 3kkz_A Uncharacterized protein 99.7 3E-17 1E-21 126.7 9.4 105 1-158 48-152 (267)
15 3ujc_A Phosphoethanolamine N-m 99.7 2E-17 6.9E-22 126.8 8.1 106 1-161 57-164 (266)
16 3vc1_A Geranyl diphosphate 2-C 99.7 4.3E-17 1.5E-21 128.8 10.2 108 1-161 119-226 (312)
17 3mgg_A Methyltransferase; NYSG 99.7 3.2E-17 1.1E-21 126.9 9.3 106 1-158 39-144 (276)
18 3dtn_A Putative methyltransfer 99.7 3.2E-17 1.1E-21 123.9 8.8 107 1-162 46-154 (234)
19 4htf_A S-adenosylmethionine-de 99.7 3.4E-17 1.2E-21 127.5 8.4 106 1-159 70-176 (285)
20 3h2b_A SAM-dependent methyltra 99.7 3E-17 1E-21 121.6 7.7 102 1-161 43-146 (203)
21 2xvm_A Tellurite resistance pr 99.7 9.1E-17 3.1E-21 118.1 9.9 104 1-159 34-139 (199)
22 3jwh_A HEN1; methyltransferase 99.7 8.7E-17 3E-21 120.5 9.8 110 1-157 31-142 (217)
23 3g5l_A Putative S-adenosylmeth 99.7 4.7E-17 1.6E-21 124.5 8.4 102 1-158 46-147 (253)
24 3hem_A Cyclopropane-fatty-acyl 99.7 1E-16 3.5E-21 126.0 10.4 106 1-161 74-188 (302)
25 3jwg_A HEN1, methyltransferase 99.7 1.3E-16 4.5E-21 119.5 10.4 110 1-157 31-142 (219)
26 1kpg_A CFA synthase;, cyclopro 99.7 1.6E-16 5.6E-21 123.7 10.9 106 1-161 66-173 (287)
27 2ex4_A Adrenal gland protein A 99.7 4.8E-17 1.6E-21 123.8 7.7 107 1-160 81-189 (241)
28 2yqz_A Hypothetical protein TT 99.7 9E-17 3.1E-21 123.1 9.0 103 1-159 41-143 (263)
29 3sm3_A SAM-dependent methyltra 99.7 1.3E-16 4.3E-21 120.1 9.7 111 1-160 32-145 (235)
30 2p7i_A Hypothetical protein; p 99.7 5.2E-17 1.8E-21 123.0 7.6 100 1-159 44-144 (250)
31 3gu3_A Methyltransferase; alph 99.7 7.6E-17 2.6E-21 125.9 8.6 105 1-158 24-128 (284)
32 3l8d_A Methyltransferase; stru 99.7 7.9E-17 2.7E-21 122.1 8.4 103 1-160 55-157 (242)
33 2p35_A Trans-aconitate 2-methy 99.7 9.2E-17 3.1E-21 122.9 8.7 101 1-159 35-135 (259)
34 3hnr_A Probable methyltransfer 99.7 1.6E-16 5.6E-21 118.9 9.8 101 1-160 47-149 (220)
35 4fsd_A Arsenic methyltransfera 99.7 1.2E-16 4.2E-21 129.9 9.7 117 1-160 85-207 (383)
36 3lcc_A Putative methyl chlorid 99.7 9.3E-17 3.2E-21 121.7 7.6 105 2-160 69-175 (235)
37 3ou2_A SAM-dependent methyltra 99.7 1.2E-16 4.2E-21 119.0 8.0 102 1-161 48-151 (218)
38 2gb4_A Thiopurine S-methyltran 99.7 1.6E-16 5.3E-21 122.8 8.1 121 1-158 70-193 (252)
39 3g07_A 7SK snRNA methylphospha 99.7 8.9E-17 3.1E-21 126.2 6.8 144 1-155 48-219 (292)
40 2fk8_A Methoxy mycolic acid sy 99.7 5.3E-16 1.8E-20 122.6 11.3 106 1-161 92-199 (318)
41 3i9f_A Putative type 11 methyl 99.7 1.8E-16 6.3E-21 114.2 7.8 99 2-162 20-118 (170)
42 2aot_A HMT, histamine N-methyl 99.7 8.3E-17 2.8E-21 126.1 6.4 112 2-159 55-175 (292)
43 3ofk_A Nodulation protein S; N 99.7 1.5E-16 5.2E-21 118.8 7.4 100 2-158 54-156 (216)
44 2vdw_A Vaccinia virus capping 99.7 1.5E-16 5.1E-21 125.9 7.6 111 1-158 50-171 (302)
45 1xtp_A LMAJ004091AAA; SGPP, st 99.7 2E-16 6.7E-21 120.7 8.0 103 1-158 95-199 (254)
46 3ccf_A Cyclopropane-fatty-acyl 99.7 2.6E-16 8.7E-21 122.3 8.6 99 1-159 59-157 (279)
47 1ve3_A Hypothetical protein PH 99.6 4.7E-16 1.6E-20 116.6 9.3 103 1-158 40-144 (227)
48 3mti_A RRNA methylase; SAM-dep 99.6 2.9E-16 9.8E-21 114.8 7.9 104 1-158 24-137 (185)
49 3ocj_A Putative exported prote 99.6 1.5E-16 5.1E-21 125.4 6.5 110 1-161 120-232 (305)
50 3thr_A Glycine N-methyltransfe 99.6 1.3E-16 4.6E-21 124.4 6.1 107 1-157 59-176 (293)
51 2kw5_A SLR1183 protein; struct 99.6 7.1E-16 2.4E-20 114.0 9.7 104 2-160 32-135 (202)
52 3ege_A Putative methyltransfer 99.6 1.8E-16 6E-21 122.3 6.6 100 1-161 36-135 (261)
53 3bkw_A MLL3908 protein, S-aden 99.6 3.5E-16 1.2E-20 118.4 7.8 102 1-158 45-146 (243)
54 3fpf_A Mtnas, putative unchara 99.6 1.1E-15 3.7E-20 120.4 10.6 100 1-157 124-223 (298)
55 3m70_A Tellurite resistance pr 99.6 1.2E-15 4.2E-20 118.7 10.2 104 1-160 122-227 (286)
56 1ri5_A MRNA capping enzyme; me 99.6 8.8E-16 3E-20 119.5 9.4 106 1-158 66-176 (298)
57 3pfg_A N-methyltransferase; N, 99.6 4.4E-16 1.5E-20 119.8 7.6 101 1-161 52-156 (263)
58 2pxx_A Uncharacterized protein 99.6 5.2E-16 1.8E-20 115.2 7.7 105 1-160 44-163 (215)
59 1zx0_A Guanidinoacetate N-meth 99.6 1.1E-16 3.8E-21 121.6 3.6 104 1-158 62-172 (236)
60 2gs9_A Hypothetical protein TT 99.6 6.6E-16 2.3E-20 114.9 7.7 98 1-159 38-135 (211)
61 3dli_A Methyltransferase; PSI- 99.6 5.5E-16 1.9E-20 117.8 7.3 97 1-159 43-143 (240)
62 3e05_A Precorrin-6Y C5,15-meth 99.6 3E-15 1E-19 111.1 11.1 103 1-158 42-144 (204)
63 3e23_A Uncharacterized protein 99.6 8.3E-16 2.8E-20 114.5 8.1 97 1-158 45-143 (211)
64 1y8c_A S-adenosylmethionine-de 99.6 1E-15 3.4E-20 115.9 8.1 100 1-156 39-142 (246)
65 3ggd_A SAM-dependent methyltra 99.6 6.9E-16 2.3E-20 117.4 7.1 104 1-161 58-168 (245)
66 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3.2E-15 1.1E-19 111.9 10.4 103 2-156 44-156 (214)
67 3bkx_A SAM-dependent methyltra 99.6 2.4E-15 8.4E-20 116.1 9.9 112 1-162 45-165 (275)
68 3i53_A O-methyltransferase; CO 99.6 3.5E-15 1.2E-19 118.8 11.0 107 1-161 171-279 (332)
69 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.9E-15 6.4E-20 113.6 8.9 103 2-156 41-153 (213)
70 3dp7_A SAM-dependent methyltra 99.6 3.5E-15 1.2E-19 120.4 10.7 108 2-162 182-293 (363)
71 3bgv_A MRNA CAP guanine-N7 met 99.6 2.5E-15 8.4E-20 118.7 9.2 113 1-159 36-158 (313)
72 3p9n_A Possible methyltransfer 99.6 2.6E-15 9E-20 110.3 8.8 105 1-158 46-155 (189)
73 3eey_A Putative rRNA methylase 99.6 2.4E-15 8.3E-20 110.8 8.5 108 1-158 24-141 (197)
74 3g2m_A PCZA361.24; SAM-depende 99.6 2.8E-15 9.5E-20 117.6 9.1 107 2-160 85-194 (299)
75 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.2E-15 4.2E-20 115.3 6.7 103 2-156 37-150 (218)
76 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.1E-15 7.3E-20 109.0 7.5 103 1-159 27-130 (178)
77 2qe6_A Uncharacterized protein 99.6 6E-15 2.1E-19 115.1 10.4 104 2-159 80-199 (274)
78 3orh_A Guanidinoacetate N-meth 99.6 6.1E-16 2.1E-20 118.0 4.3 101 2-156 63-170 (236)
79 3bxo_A N,N-dimethyltransferase 99.6 3E-15 1E-19 113.0 8.0 101 1-161 42-146 (239)
80 2a14_A Indolethylamine N-methy 99.6 8E-16 2.7E-20 118.9 4.8 134 1-158 57-199 (263)
81 2r3s_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 118.5 8.5 109 1-162 167-277 (335)
82 1xdz_A Methyltransferase GIDB; 99.6 2.3E-15 7.8E-20 114.8 7.1 100 1-156 72-174 (240)
83 3gwz_A MMCR; methyltransferase 99.6 1.1E-14 3.7E-19 117.8 11.3 108 1-162 204-313 (369)
84 1x19_A CRTF-related protein; m 99.6 1.1E-14 3.9E-19 117.0 11.2 107 1-161 192-300 (359)
85 3njr_A Precorrin-6Y methylase; 99.6 1.1E-14 3.9E-19 108.6 10.4 100 1-158 57-156 (204)
86 2avn_A Ubiquinone/menaquinone 99.6 3.9E-15 1.3E-19 114.6 7.7 99 1-159 56-155 (260)
87 1dus_A MJ0882; hypothetical pr 99.6 8E-15 2.7E-19 106.9 8.9 104 1-159 54-160 (194)
88 3e8s_A Putative SAM dependent 99.6 2.2E-15 7.4E-20 112.6 5.7 99 1-160 54-156 (227)
89 2g72_A Phenylethanolamine N-me 99.6 2.4E-15 8.1E-20 117.5 6.1 130 1-157 73-216 (289)
90 2ip2_A Probable phenazine-spec 99.6 8.5E-15 2.9E-19 116.5 9.1 107 1-161 169-277 (334)
91 3d2l_A SAM-dependent methyltra 99.6 8.2E-15 2.8E-19 110.9 8.6 99 1-156 35-137 (243)
92 3mcz_A O-methyltransferase; ad 99.6 9.2E-15 3.1E-19 117.1 8.8 110 1-162 181-293 (352)
93 3cgg_A SAM-dependent methyltra 99.5 1.6E-14 5.4E-19 105.4 8.7 99 1-158 48-149 (195)
94 1qzz_A RDMB, aclacinomycin-10- 99.5 1.6E-14 5.5E-19 116.4 9.5 103 1-157 184-288 (374)
95 2i62_A Nicotinamide N-methyltr 99.5 4E-15 1.4E-19 114.0 5.5 133 2-158 59-200 (265)
96 3g89_A Ribosomal RNA small sub 99.5 7.6E-15 2.6E-19 113.0 7.0 100 1-156 82-184 (249)
97 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.2E-14 4E-19 111.1 7.8 108 2-156 49-168 (235)
98 1jsx_A Glucose-inhibited divis 99.5 1.7E-14 5.9E-19 106.9 8.3 99 1-156 67-165 (207)
99 1nt2_A Fibrillarin-like PRE-rR 99.5 2.4E-14 8.1E-19 107.5 9.0 99 1-156 59-161 (210)
100 3iv6_A Putative Zn-dependent a 99.5 1.6E-14 5.6E-19 112.0 8.3 100 1-156 47-148 (261)
101 3fzg_A 16S rRNA methylase; met 99.5 1.7E-15 5.8E-20 112.1 2.6 102 1-156 51-152 (200)
102 3u81_A Catechol O-methyltransf 99.5 8.3E-15 2.9E-19 110.2 6.4 109 1-160 60-174 (221)
103 3lbf_A Protein-L-isoaspartate 99.5 1.4E-14 4.6E-19 107.8 7.4 97 1-157 79-175 (210)
104 3uwp_A Histone-lysine N-methyl 99.5 1.1E-14 3.9E-19 119.0 7.3 112 1-163 175-295 (438)
105 3dmg_A Probable ribosomal RNA 99.5 3E-14 1E-18 116.0 9.2 101 1-156 235-340 (381)
106 3htx_A HEN1; HEN1, small RNA m 99.5 2.3E-14 7.9E-19 125.3 8.8 113 1-159 723-837 (950)
107 1wzn_A SAM-dependent methyltra 99.5 4.5E-14 1.5E-18 107.6 9.4 99 1-155 43-144 (252)
108 3cc8_A Putative methyltransfer 99.5 2.3E-14 7.9E-19 107.1 7.4 97 1-158 34-132 (230)
109 1af7_A Chemotaxis receptor met 99.5 1.5E-14 5.1E-19 113.0 6.4 127 1-154 107-250 (274)
110 3mq2_A 16S rRNA methyltransfer 99.5 1.4E-14 4.6E-19 108.5 5.9 101 2-155 30-139 (218)
111 1vlm_A SAM-dependent methyltra 99.5 3.4E-14 1.2E-18 106.5 8.1 94 1-159 49-142 (219)
112 3q7e_A Protein arginine N-meth 99.5 4.1E-14 1.4E-18 113.8 9.0 101 1-154 68-171 (349)
113 2ift_A Putative methylase HI07 99.5 1.7E-14 5.7E-19 107.4 6.1 107 1-159 55-166 (201)
114 1tw3_A COMT, carminomycin 4-O- 99.5 5.5E-14 1.9E-18 112.8 9.2 104 1-158 185-290 (360)
115 3grz_A L11 mtase, ribosomal pr 99.5 1.8E-14 6.2E-19 106.8 6.0 102 1-160 62-163 (205)
116 1o9g_A RRNA methyltransferase; 99.5 2.4E-14 8.1E-19 109.7 6.6 45 2-57 54-100 (250)
117 3evz_A Methyltransferase; NYSG 99.5 7.1E-14 2.4E-18 105.3 9.1 122 1-157 57-180 (230)
118 4e2x_A TCAB9; kijanose, tetron 99.5 2.8E-15 9.7E-20 122.7 1.4 101 1-157 109-209 (416)
119 2fyt_A Protein arginine N-meth 99.5 5E-14 1.7E-18 112.9 8.7 100 1-153 66-168 (340)
120 1yb2_A Hypothetical protein TA 99.5 5.2E-14 1.8E-18 109.4 8.5 101 1-158 112-213 (275)
121 3lpm_A Putative methyltransfer 99.5 3.6E-14 1.2E-18 109.3 7.4 124 1-156 51-176 (259)
122 4df3_A Fibrillarin-like rRNA/T 99.5 3E-14 1E-18 108.8 6.6 101 1-156 79-182 (233)
123 2fpo_A Methylase YHHF; structu 99.5 5.3E-14 1.8E-18 104.7 7.9 104 1-158 56-162 (202)
124 3tfw_A Putative O-methyltransf 99.5 6.5E-14 2.2E-18 107.4 8.5 105 1-158 65-172 (248)
125 1ixk_A Methyltransferase; open 99.5 6.1E-14 2.1E-18 111.4 8.3 129 1-158 120-248 (315)
126 2pwy_A TRNA (adenine-N(1)-)-me 99.5 8.4E-14 2.9E-18 106.4 8.8 102 1-158 98-200 (258)
127 2yxe_A Protein-L-isoaspartate 99.5 7.9E-14 2.7E-18 104.0 8.4 100 1-157 79-178 (215)
128 3dr5_A Putative O-methyltransf 99.5 2.7E-14 9.4E-19 108.0 5.9 103 2-157 59-164 (221)
129 1dl5_A Protein-L-isoaspartate 99.5 7.4E-14 2.5E-18 110.8 8.6 100 1-157 77-176 (317)
130 1fbn_A MJ fibrillarin homologu 99.5 9.6E-14 3.3E-18 105.1 8.8 95 1-155 76-177 (230)
131 1u2z_A Histone-lysine N-methyl 99.5 1.1E-13 3.7E-18 114.2 9.8 105 1-156 244-359 (433)
132 2frn_A Hypothetical protein PH 99.5 7.9E-14 2.7E-18 108.8 8.2 102 1-159 127-228 (278)
133 3m33_A Uncharacterized protein 99.5 2.2E-14 7.6E-19 108.2 4.9 88 1-153 50-139 (226)
134 1i9g_A Hypothetical protein RV 99.5 9.2E-14 3.2E-18 107.6 8.5 103 1-158 101-205 (280)
135 3giw_A Protein of unknown func 99.5 5.4E-14 1.9E-18 109.6 7.0 109 2-161 81-205 (277)
136 3p2e_A 16S rRNA methylase; met 99.5 2.8E-14 9.4E-19 108.3 5.2 99 2-154 27-137 (225)
137 4dcm_A Ribosomal RNA large sub 99.5 1.1E-13 3.7E-18 112.5 9.0 108 1-158 224-336 (375)
138 3mb5_A SAM-dependent methyltra 99.5 1.2E-13 4.2E-18 105.6 8.5 102 1-158 95-196 (255)
139 3gdh_A Trimethylguanosine synt 99.5 1.9E-15 6.5E-20 114.8 -1.7 132 1-156 80-216 (241)
140 1p91_A Ribosomal RNA large sub 99.5 6.1E-14 2.1E-18 108.1 6.8 95 1-159 87-181 (269)
141 3lst_A CALO1 methyltransferase 99.5 5.4E-14 1.9E-18 112.8 6.6 104 2-162 187-292 (348)
142 3ntv_A MW1564 protein; rossman 99.5 6.4E-14 2.2E-18 106.3 6.5 102 1-156 73-176 (232)
143 4dzr_A Protein-(glutamine-N5) 99.5 4.9E-15 1.7E-19 109.8 0.3 129 1-158 32-166 (215)
144 3r0q_C Probable protein argini 99.5 8.3E-14 2.9E-18 113.1 7.5 102 1-156 65-169 (376)
145 2yxd_A Probable cobalt-precorr 99.5 1.6E-13 5.4E-18 99.1 8.1 97 1-158 37-133 (183)
146 2vdv_E TRNA (guanine-N(7)-)-me 99.5 2E-13 6.7E-18 104.4 8.9 45 2-57 52-96 (246)
147 3reo_A (ISO)eugenol O-methyltr 99.5 8.7E-14 3E-18 112.6 6.9 100 1-162 205-306 (368)
148 1g6q_1 HnRNP arginine N-methyl 99.5 2.1E-13 7.1E-18 108.8 8.8 101 1-154 40-143 (328)
149 2b3t_A Protein methyltransfera 99.4 1.4E-13 4.7E-18 106.9 7.5 127 1-155 111-237 (276)
150 2pjd_A Ribosomal RNA small sub 99.4 7.9E-14 2.7E-18 111.8 6.3 102 2-158 199-305 (343)
151 2esr_A Methyltransferase; stru 99.4 5.7E-14 1.9E-18 101.8 4.9 106 1-159 33-141 (177)
152 1i1n_A Protein-L-isoaspartate 99.4 2E-13 7E-18 102.6 8.0 106 1-158 79-184 (226)
153 3duw_A OMT, O-methyltransferas 99.4 1.3E-13 4.5E-18 103.4 6.8 105 1-158 60-169 (223)
154 1fp1_D Isoliquiritigenin 2'-O- 99.4 5.5E-14 1.9E-18 113.7 5.0 100 1-162 211-312 (372)
155 3tr6_A O-methyltransferase; ce 99.4 8.1E-14 2.8E-18 104.6 5.6 105 1-158 66-176 (225)
156 2fhp_A Methylase, putative; al 99.4 5.7E-14 1.9E-18 102.2 4.5 106 1-159 46-157 (187)
157 1fp2_A Isoflavone O-methyltran 99.4 1.1E-13 3.9E-18 111.0 6.6 100 1-162 190-294 (352)
158 2ozv_A Hypothetical protein AT 99.4 1.7E-13 5.9E-18 105.8 7.4 121 2-156 39-170 (260)
159 2ipx_A RRNA 2'-O-methyltransfe 99.4 3.4E-13 1.2E-17 102.0 8.9 101 1-156 79-182 (233)
160 3c3p_A Methyltransferase; NP_9 99.4 8.6E-14 3E-18 103.7 5.4 102 1-156 58-160 (210)
161 3sso_A Methyltransferase; macr 99.4 6.3E-14 2.1E-18 114.3 4.9 104 1-165 218-333 (419)
162 2gpy_A O-methyltransferase; st 99.4 1.5E-13 5.1E-18 103.9 6.7 103 1-157 56-161 (233)
163 3r3h_A O-methyltransferase, SA 99.4 2.5E-14 8.5E-19 109.6 2.3 105 1-158 62-172 (242)
164 4a6d_A Hydroxyindole O-methylt 99.4 5.9E-13 2E-17 107.2 10.3 106 2-162 182-289 (353)
165 1ws6_A Methyltransferase; stru 99.4 7.2E-14 2.5E-18 100.1 4.2 103 1-160 43-151 (171)
166 3p9c_A Caffeic acid O-methyltr 99.4 1.5E-13 5.3E-18 111.0 6.6 100 1-162 203-304 (364)
167 3a27_A TYW2, uncharacterized p 99.4 3.2E-13 1.1E-17 105.1 8.1 103 1-160 121-223 (272)
168 1l3i_A Precorrin-6Y methyltran 99.4 2.8E-13 9.6E-18 98.4 6.7 101 1-158 35-136 (192)
169 4azs_A Methyltransferase WBDD; 99.4 9.2E-14 3.1E-18 118.4 4.6 107 1-161 68-178 (569)
170 3tma_A Methyltransferase; thum 99.4 6.4E-13 2.2E-17 106.8 9.0 107 1-158 205-319 (354)
171 2nxc_A L11 mtase, ribosomal pr 99.4 2.3E-13 8E-18 104.8 6.2 101 1-160 122-222 (254)
172 2pbf_A Protein-L-isoaspartate 99.4 4E-13 1.4E-17 101.0 7.2 110 1-158 82-195 (227)
173 1vbf_A 231AA long hypothetical 99.4 2.6E-13 9E-18 102.2 6.1 96 1-158 72-167 (231)
174 3ajd_A Putative methyltransfer 99.4 2.4E-13 8.3E-18 105.8 6.1 126 1-159 85-214 (274)
175 1jg1_A PIMT;, protein-L-isoasp 99.4 6.7E-13 2.3E-17 100.6 8.3 98 1-158 93-191 (235)
176 3bzb_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 102.4 9.6 107 1-155 81-204 (281)
177 3q87_B N6 adenine specific DNA 99.4 6.3E-13 2.2E-17 96.3 7.5 94 1-160 25-127 (170)
178 1g8a_A Fibrillarin-like PRE-rR 99.4 1.3E-12 4.5E-17 98.3 9.3 99 1-155 75-177 (227)
179 1r18_A Protein-L-isoaspartate( 99.4 4.3E-13 1.5E-17 101.1 6.6 104 1-157 86-195 (227)
180 1ej0_A FTSJ; methyltransferase 99.4 3.2E-13 1.1E-17 96.6 5.5 99 1-161 24-141 (180)
181 1sui_A Caffeoyl-COA O-methyltr 99.4 2.9E-13 9.9E-18 103.9 5.6 103 1-156 81-190 (247)
182 2yxl_A PH0851 protein, 450AA l 99.4 1.3E-12 4.4E-17 108.4 9.7 114 1-159 261-392 (450)
183 1o54_A SAM-dependent O-methylt 99.4 8E-13 2.7E-17 102.6 8.0 102 1-158 114-215 (277)
184 2b25_A Hypothetical protein; s 99.4 8.9E-13 3E-17 105.1 7.3 109 1-158 107-221 (336)
185 2frx_A Hypothetical protein YE 99.4 9.8E-13 3.3E-17 110.0 7.8 129 1-158 119-248 (479)
186 2qm3_A Predicted methyltransfe 99.4 3.2E-12 1.1E-16 103.6 10.6 105 1-159 174-280 (373)
187 3cbg_A O-methyltransferase; cy 99.4 7.4E-13 2.5E-17 100.5 6.2 106 1-159 74-185 (232)
188 2plw_A Ribosomal RNA methyltra 99.4 7.5E-13 2.6E-17 97.6 6.0 114 2-159 25-157 (201)
189 2hnk_A SAM-dependent O-methylt 99.4 6.2E-13 2.1E-17 101.1 5.6 105 1-158 62-183 (239)
190 1zg3_A Isoflavanone 4'-O-methy 99.4 6.3E-13 2.2E-17 106.8 5.9 100 1-162 195-299 (358)
191 3bwc_A Spermidine synthase; SA 99.4 4.9E-13 1.7E-17 105.6 5.2 108 1-156 97-210 (304)
192 2yvl_A TRMI protein, hypotheti 99.4 3.8E-12 1.3E-16 96.6 9.9 99 1-157 93-191 (248)
193 2y1w_A Histone-arginine methyl 99.4 1.4E-12 4.7E-17 104.8 7.8 100 1-154 52-153 (348)
194 3gjy_A Spermidine synthase; AP 99.4 9.1E-13 3.1E-17 104.7 6.6 107 1-159 91-203 (317)
195 3id6_C Fibrillarin-like rRNA/T 99.3 3.5E-12 1.2E-16 97.3 9.2 99 1-155 78-180 (232)
196 3adn_A Spermidine synthase; am 99.3 1.4E-12 4.7E-17 102.8 7.2 109 1-156 85-198 (294)
197 2igt_A SAM dependent methyltra 99.3 9.4E-13 3.2E-17 105.3 6.3 110 2-159 156-275 (332)
198 3c3y_A Pfomt, O-methyltransfer 99.3 8.6E-13 3E-17 100.5 5.5 103 1-156 72-181 (237)
199 2bm8_A Cephalosporin hydroxyla 99.3 8.1E-13 2.8E-17 100.8 5.2 98 1-157 83-188 (236)
200 1nv8_A HEMK protein; class I a 99.3 2.7E-12 9.3E-17 100.5 8.3 124 1-160 125-252 (284)
201 3opn_A Putative hemolysin; str 99.3 4.1E-13 1.4E-17 102.4 3.4 97 1-155 39-136 (232)
202 3m6w_A RRNA methylase; rRNA me 99.3 7.6E-13 2.6E-17 110.1 5.1 128 1-158 103-231 (464)
203 2avd_A Catechol-O-methyltransf 99.3 9.8E-13 3.3E-17 98.9 5.1 105 1-158 71-181 (229)
204 2zfu_A Nucleomethylin, cerebra 99.3 1E-12 3.4E-17 97.9 4.7 86 1-159 69-154 (215)
205 3hp7_A Hemolysin, putative; st 99.3 1.2E-12 4E-17 103.0 4.6 98 1-155 87-184 (291)
206 2h00_A Methyltransferase 10 do 99.3 8E-13 2.7E-17 101.2 3.3 79 2-95 68-152 (254)
207 1uir_A Polyamine aminopropyltr 99.3 2.3E-12 7.7E-17 102.3 5.9 109 1-156 79-195 (314)
208 3b3j_A Histone-arginine methyl 99.3 2.4E-12 8.3E-17 107.6 6.2 100 1-154 160-261 (480)
209 3m4x_A NOL1/NOP2/SUN family pr 99.3 2E-12 7E-17 107.4 5.7 127 1-159 107-237 (456)
210 1xj5_A Spermidine synthase 1; 99.3 2.6E-12 8.8E-17 102.9 6.1 105 1-155 122-234 (334)
211 4hc4_A Protein arginine N-meth 99.3 8.6E-12 3E-16 101.3 8.6 99 2-154 86-187 (376)
212 3lec_A NADB-rossmann superfami 99.3 7.6E-12 2.6E-16 95.2 7.6 103 2-157 24-126 (230)
213 1sqg_A SUN protein, FMU protei 99.3 6.2E-12 2.1E-16 103.7 7.6 125 1-159 248-377 (429)
214 1inl_A Spermidine synthase; be 99.3 3.9E-12 1.3E-16 100.1 6.0 108 1-156 92-205 (296)
215 3kr9_A SAM-dependent methyltra 99.3 8E-12 2.7E-16 94.9 7.2 102 2-157 18-120 (225)
216 2b78_A Hypothetical protein SM 99.3 3E-12 1E-16 104.3 4.9 108 1-159 214-334 (385)
217 3gnl_A Uncharacterized protein 99.3 1.1E-11 3.8E-16 95.1 7.5 103 2-157 24-126 (244)
218 2pt6_A Spermidine synthase; tr 99.3 3.6E-12 1.2E-16 101.5 4.9 108 1-156 118-230 (321)
219 2o07_A Spermidine synthase; st 99.3 4.3E-12 1.5E-16 100.3 5.3 106 1-156 97-209 (304)
220 1iy9_A Spermidine synthase; ro 99.3 4.5E-12 1.5E-16 98.8 5.3 108 1-156 77-189 (275)
221 2b2c_A Spermidine synthase; be 99.3 2.5E-12 8.4E-17 102.2 3.9 108 1-156 110-222 (314)
222 2i7c_A Spermidine synthase; tr 99.2 4.1E-12 1.4E-16 99.4 4.8 108 1-156 80-192 (283)
223 2nyu_A Putative ribosomal RNA 99.2 8.4E-12 2.9E-16 91.4 6.0 106 1-160 24-149 (196)
224 2ld4_A Anamorsin; methyltransf 99.2 1.7E-12 5.8E-17 94.0 1.8 72 40-156 26-101 (176)
225 2as0_A Hypothetical protein PH 99.2 4.2E-12 1.5E-16 103.5 4.1 111 1-159 219-338 (396)
226 1mjf_A Spermidine synthase; sp 99.2 5.6E-12 1.9E-16 98.5 4.1 112 1-156 77-193 (281)
227 1wxx_A TT1595, hypothetical pr 99.2 4.2E-12 1.4E-16 103.2 3.2 108 2-159 212-328 (382)
228 2wa2_A Non-structural protein 99.2 1.4E-12 4.7E-17 101.9 0.3 104 1-162 84-198 (276)
229 3k6r_A Putative transferase PH 99.2 3.4E-11 1.2E-15 94.1 8.0 104 1-161 127-230 (278)
230 3v97_A Ribosomal RNA large sub 99.2 1.9E-11 6.3E-16 106.5 6.6 118 1-158 541-659 (703)
231 2oxt_A Nucleoside-2'-O-methylt 99.2 2.1E-12 7.2E-17 100.3 0.3 104 1-162 76-190 (265)
232 4dmg_A Putative uncharacterize 99.2 1.8E-11 6.2E-16 100.0 5.5 106 1-160 216-330 (393)
233 3tm4_A TRNA (guanine N2-)-meth 99.2 4.7E-11 1.6E-15 96.8 7.7 103 1-156 219-329 (373)
234 3dou_A Ribosomal RNA large sub 99.2 1.5E-11 5.2E-16 90.9 4.3 32 1-45 27-58 (191)
235 2yx1_A Hypothetical protein MJ 99.2 4.3E-11 1.5E-15 95.7 7.1 99 1-160 197-295 (336)
236 3c0k_A UPF0064 protein YCCW; P 99.2 2.5E-11 8.5E-16 99.0 5.7 117 1-159 222-342 (396)
237 1zq9_A Probable dimethyladenos 99.1 5.9E-11 2E-15 92.9 6.5 44 1-57 30-73 (285)
238 1ne2_A Hypothetical protein TA 99.1 1.2E-10 4E-15 85.9 7.3 85 1-146 53-139 (200)
239 1wy7_A Hypothetical protein PH 99.1 4E-10 1.4E-14 83.2 9.2 72 1-93 51-122 (207)
240 2f8l_A Hypothetical protein LM 99.1 1.9E-10 6.4E-15 92.1 7.8 123 2-156 133-256 (344)
241 2p41_A Type II methyltransfera 99.1 2.6E-11 9E-16 95.9 2.6 100 1-159 84-194 (305)
242 2cmg_A Spermidine synthase; tr 99.1 3.5E-11 1.2E-15 93.2 3.1 96 1-156 74-171 (262)
243 3lcv_B Sisomicin-gentamicin re 99.1 1.5E-10 5.2E-15 89.4 5.6 102 1-157 134-237 (281)
244 2b9e_A NOL1/NOP2/SUN domain fa 99.0 7.2E-10 2.5E-14 87.8 9.0 130 1-158 104-236 (309)
245 3frh_A 16S rRNA methylase; met 99.0 4.9E-10 1.7E-14 85.6 7.6 99 1-156 107-206 (253)
246 2h1r_A Dimethyladenosine trans 99.0 6.1E-10 2.1E-14 87.7 8.1 72 1-92 44-115 (299)
247 2jjq_A Uncharacterized RNA met 99.0 1.4E-09 4.8E-14 89.6 9.2 95 1-156 292-387 (425)
248 2xyq_A Putative 2'-O-methyl tr 99.0 4E-10 1.4E-14 88.5 5.3 26 135-160 150-175 (290)
249 1uwv_A 23S rRNA (uracil-5-)-me 99.0 2.2E-09 7.4E-14 88.6 9.2 58 1-76 288-345 (433)
250 2okc_A Type I restriction enzy 98.9 1.1E-09 3.7E-14 90.6 6.7 133 1-156 173-307 (445)
251 3bt7_A TRNA (uracil-5-)-methyl 98.9 4.8E-10 1.6E-14 90.7 3.5 57 2-76 216-272 (369)
252 1qam_A ERMC' methyltransferase 98.9 6.5E-10 2.2E-14 85.1 3.5 61 1-81 32-92 (244)
253 3k0b_A Predicted N6-adenine-sp 98.9 5.3E-09 1.8E-13 85.4 8.7 114 2-156 204-350 (393)
254 2dul_A N(2),N(2)-dimethylguano 98.9 1.7E-09 5.9E-14 87.8 5.2 115 1-156 49-164 (378)
255 3ldg_A Putative uncharacterize 98.9 1.3E-08 4.4E-13 82.8 10.1 114 2-156 197-343 (384)
256 3ldu_A Putative methylase; str 98.8 8.8E-09 3E-13 83.8 8.6 115 1-156 197-344 (385)
257 1yub_A Ermam, rRNA methyltrans 98.8 3.3E-11 1.1E-15 92.1 -6.2 59 2-80 32-90 (245)
258 3gru_A Dimethyladenosine trans 98.8 9.8E-09 3.3E-13 80.8 7.5 73 1-93 52-124 (295)
259 3axs_A Probable N(2),N(2)-dime 98.8 6.4E-09 2.2E-13 84.8 5.4 100 2-156 55-158 (392)
260 2qfm_A Spermine synthase; sper 98.8 3.8E-09 1.3E-13 85.1 3.7 43 1-55 190-232 (364)
261 2ih2_A Modification methylase 98.7 9.6E-09 3.3E-13 83.7 4.5 122 2-157 42-165 (421)
262 3fut_A Dimethyladenosine trans 98.7 3.6E-08 1.2E-12 76.6 7.3 72 2-94 49-121 (271)
263 3tqs_A Ribosomal RNA small sub 98.7 3E-08 1E-12 76.4 6.7 72 1-93 31-106 (255)
264 2ar0_A M.ecoki, type I restric 98.7 1.8E-08 6.3E-13 85.3 5.4 134 1-156 171-312 (541)
265 3b5i_A S-adenosyl-L-methionine 98.7 3.9E-08 1.3E-12 79.7 7.1 28 134-161 203-230 (374)
266 1m6y_A S-adenosyl-methyltransf 98.7 1.4E-08 4.9E-13 80.0 4.1 79 1-96 28-111 (301)
267 3v97_A Ribosomal RNA large sub 98.6 9.8E-08 3.4E-12 83.1 8.9 58 2-59 193-281 (703)
268 3ll7_A Putative methyltransfer 98.6 5.1E-08 1.7E-12 79.9 4.8 77 1-95 95-175 (410)
269 1wg8_A Predicted S-adenosylmet 98.5 4.5E-08 1.5E-12 76.3 4.1 74 2-97 25-103 (285)
270 2efj_A 3,7-dimethylxanthine me 98.5 3.9E-08 1.3E-12 79.9 3.2 158 1-162 54-231 (384)
271 4fzv_A Putative methyltransfer 98.5 1.8E-07 6.1E-12 75.5 6.5 135 1-159 150-287 (359)
272 3cvo_A Methyltransferase-like 98.5 7.8E-07 2.7E-11 66.2 9.2 111 1-155 32-153 (202)
273 3uzu_A Ribosomal RNA small sub 98.5 2.2E-07 7.6E-12 72.4 6.5 62 1-81 44-106 (279)
274 2r6z_A UPF0341 protein in RSP 98.5 5E-08 1.7E-12 75.3 2.3 77 1-94 85-172 (258)
275 3o4f_A Spermidine synthase; am 98.5 4.3E-07 1.5E-11 71.2 7.4 107 2-155 86-197 (294)
276 1m6e_X S-adenosyl-L-methionnin 98.4 1.3E-07 4.5E-12 76.2 2.6 155 1-162 53-215 (359)
277 3khk_A Type I restriction-modi 98.4 1.8E-06 6E-11 73.2 9.5 90 2-95 247-341 (544)
278 4gqb_A Protein arginine N-meth 98.3 9.6E-07 3.3E-11 75.9 7.2 103 2-153 360-464 (637)
279 3ua3_A Protein arginine N-meth 98.3 3.1E-07 1.1E-11 79.4 4.0 111 2-153 412-531 (745)
280 1qyr_A KSGA, high level kasuga 98.3 4.5E-07 1.5E-11 69.7 4.1 60 1-80 23-82 (252)
281 3lkd_A Type I restriction-modi 98.3 5E-06 1.7E-10 70.4 10.8 83 1-94 223-308 (542)
282 3ftd_A Dimethyladenosine trans 98.3 5.5E-07 1.9E-11 69.0 4.3 60 1-81 33-92 (249)
283 3tka_A Ribosomal RNA small sub 98.2 2.6E-07 9E-12 73.6 1.5 77 2-97 60-142 (347)
284 3evf_A RNA-directed RNA polyme 98.2 2.6E-07 9E-12 71.6 1.3 104 1-158 76-186 (277)
285 3s1s_A Restriction endonucleas 98.1 4.4E-06 1.5E-10 73.4 7.4 83 1-93 323-409 (878)
286 2oyr_A UPF0341 protein YHIQ; a 98.1 2.4E-06 8.2E-11 65.9 5.2 81 1-94 90-175 (258)
287 2qy6_A UPF0209 protein YFCK; s 98.0 5.5E-06 1.9E-10 63.8 5.4 123 2-154 63-211 (257)
288 2vz8_A Fatty acid synthase; tr 98.0 1.1E-06 3.8E-11 85.4 1.6 107 1-157 1242-1349(2512)
289 2wk1_A NOVP; transferase, O-me 97.8 2.1E-05 7.1E-10 61.3 5.2 109 2-157 109-245 (282)
290 3gcz_A Polyprotein; flavivirus 97.7 3.9E-06 1.3E-10 65.1 -1.0 34 1-45 92-125 (282)
291 2zig_A TTHA0409, putative modi 97.7 5.7E-05 2E-09 59.0 5.6 44 1-57 237-280 (297)
292 4auk_A Ribosomal RNA large sub 97.7 0.0001 3.6E-09 59.4 7.2 31 1-44 213-243 (375)
293 3c6k_A Spermine synthase; sper 97.7 7.1E-05 2.4E-09 60.6 6.2 42 2-55 208-249 (381)
294 3ufb_A Type I restriction-modi 97.5 0.0006 2E-08 57.5 9.8 88 2-94 220-313 (530)
295 3eld_A Methyltransferase; flav 97.2 7.7E-05 2.6E-09 58.3 1.3 34 1-45 83-116 (300)
296 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00018 6.2E-09 50.7 2.4 36 1-48 37-73 (153)
297 3lkz_A Non-structural protein 96.5 0.00079 2.7E-08 52.6 1.5 34 1-45 96-129 (321)
298 1i4w_A Mitochondrial replicati 96.5 0.0069 2.3E-07 48.5 6.9 57 2-77 61-117 (353)
299 2px2_A Genome polyprotein [con 96.5 0.00043 1.5E-08 53.1 -0.2 20 1-20 75-94 (269)
300 3p8z_A Mtase, non-structural p 96.4 0.00059 2E-08 51.8 0.4 33 1-44 80-112 (267)
301 3g7u_A Cytosine-specific methy 96.2 0.0095 3.3E-07 48.0 6.3 75 1-97 3-85 (376)
302 1g55_A DNA cytosine methyltran 95.6 0.009 3.1E-07 47.5 3.7 76 1-96 3-81 (343)
303 1rjd_A PPM1P, carboxy methyl t 95.5 0.074 2.5E-06 42.1 8.9 126 2-160 100-236 (334)
304 2c7p_A Modification methylase 95.5 0.055 1.9E-06 42.7 7.9 76 1-100 12-88 (327)
305 1boo_A Protein (N-4 cytosine-s 95.4 0.013 4.6E-07 46.0 4.1 44 2-58 255-298 (323)
306 3ubt_Y Modification methylase 95.3 0.022 7.7E-07 44.5 5.2 73 1-96 1-74 (331)
307 3r24_A NSP16, 2'-O-methyl tran 95.2 0.02 6.7E-07 44.9 4.4 27 135-161 196-222 (344)
308 1eg2_A Modification methylase 95.1 0.018 6.2E-07 45.3 4.0 44 2-58 245-291 (319)
309 2oo3_A Protein involved in cat 95.0 0.0082 2.8E-07 46.6 1.8 41 2-55 94-134 (283)
310 3qv2_A 5-cytosine DNA methyltr 94.4 0.061 2.1E-06 42.5 5.4 75 1-96 11-89 (327)
311 4h0n_A DNMT2; SAH binding, tra 94.4 0.045 1.6E-06 43.3 4.6 77 1-97 4-83 (333)
312 2py6_A Methyltransferase FKBM; 94.1 0.093 3.2E-06 42.6 6.1 45 2-56 229-274 (409)
313 1f8f_A Benzyl alcohol dehydrog 93.9 0.075 2.6E-06 42.2 5.0 39 2-52 193-233 (371)
314 3tos_A CALS11; methyltransfera 93.0 0.07 2.4E-06 40.8 3.3 59 101-161 158-222 (257)
315 2qrv_A DNA (cytosine-5)-methyl 92.9 0.17 5.8E-06 39.4 5.5 76 1-99 17-99 (295)
316 2uyo_A Hypothetical protein ML 92.6 0.79 2.7E-05 35.8 9.0 104 2-157 105-219 (310)
317 3fpc_A NADP-dependent alcohol 91.8 0.2 6.7E-06 39.4 4.7 39 2-52 169-209 (352)
318 3s2e_A Zinc-containing alcohol 91.4 0.19 6.3E-06 39.3 4.2 39 2-52 169-208 (340)
319 3two_A Mannitol dehydrogenase; 91.4 0.095 3.2E-06 41.2 2.5 39 2-52 179-218 (348)
320 1pqw_A Polyketide synthase; ro 91.4 0.15 5.2E-06 36.5 3.3 32 119-157 107-138 (198)
321 4ej6_A Putative zinc-binding d 91.1 0.19 6.5E-06 39.9 4.0 39 2-52 185-225 (370)
322 1pl8_A Human sorbitol dehydrog 91.0 0.26 8.8E-06 38.8 4.7 39 2-52 174-214 (356)
323 3m6i_A L-arabinitol 4-dehydrog 90.8 0.35 1.2E-05 38.1 5.2 40 2-53 182-223 (363)
324 1e3j_A NADP(H)-dependent ketos 90.4 0.57 2E-05 36.7 6.2 39 2-52 171-210 (352)
325 1zkd_A DUF185; NESG, RPR58, st 89.5 0.21 7.3E-06 40.4 3.0 77 2-90 83-165 (387)
326 4f3n_A Uncharacterized ACR, CO 89.3 0.43 1.5E-05 39.1 4.6 80 2-90 140-223 (432)
327 4dvj_A Putative zinc-dependent 89.1 0.26 9E-06 39.0 3.2 40 2-52 174-215 (363)
328 2zig_A TTHA0409, putative modi 89.0 0.18 6.1E-06 38.9 2.1 74 66-155 21-96 (297)
329 3uko_A Alcohol dehydrogenase c 88.9 0.63 2.2E-05 36.8 5.4 39 2-52 196-236 (378)
330 2fzw_A Alcohol dehydrogenase c 88.6 0.94 3.2E-05 35.7 6.2 39 2-52 193-233 (373)
331 2jhf_A Alcohol dehydrogenase E 88.1 0.9 3.1E-05 35.9 5.8 39 2-52 194-234 (374)
332 2d8a_A PH0655, probable L-thre 88.1 0.81 2.8E-05 35.8 5.4 39 2-52 170-210 (348)
333 1p0f_A NADP-dependent alcohol 87.9 0.9 3.1E-05 35.8 5.7 39 2-52 194-234 (373)
334 3uog_A Alcohol dehydrogenase; 87.8 0.55 1.9E-05 37.0 4.3 39 2-52 192-231 (363)
335 1cdo_A Alcohol dehydrogenase; 87.5 0.79 2.7E-05 36.2 5.1 39 2-52 195-235 (374)
336 1v3u_A Leukotriene B4 12- hydr 87.4 0.53 1.8E-05 36.5 3.9 32 119-157 214-245 (333)
337 3gms_A Putative NADPH:quinone 86.7 0.77 2.6E-05 35.8 4.5 39 2-52 147-187 (340)
338 3ip1_A Alcohol dehydrogenase, 86.5 2.3 7.8E-05 34.0 7.4 39 2-52 216-256 (404)
339 2km1_A Protein DRE2; yeast, an 86.5 0.26 9.1E-06 33.9 1.5 43 112-154 52-96 (136)
340 3jyn_A Quinone oxidoreductase; 86.2 1.2 4E-05 34.4 5.3 39 2-52 143-183 (325)
341 3nx4_A Putative oxidoreductase 86.2 0.5 1.7E-05 36.4 3.2 38 3-52 150-189 (324)
342 3me5_A Cytosine-specific methy 86.0 0.64 2.2E-05 38.6 3.9 42 1-54 89-130 (482)
343 2j3h_A NADP-dependent oxidored 85.8 0.63 2.1E-05 36.2 3.6 38 2-51 158-197 (345)
344 1e3i_A Alcohol dehydrogenase, 85.6 1.1 3.9E-05 35.3 5.1 39 2-52 198-238 (376)
345 1qor_A Quinone oxidoreductase; 85.6 1.2 4.2E-05 34.3 5.2 32 119-157 209-240 (327)
346 4eye_A Probable oxidoreductase 85.5 0.77 2.6E-05 35.8 4.0 39 2-52 162-202 (342)
347 4b7c_A Probable oxidoreductase 85.4 0.48 1.6E-05 36.8 2.7 37 2-50 152-190 (336)
348 2b5w_A Glucose dehydrogenase; 85.4 1.1 3.7E-05 35.2 4.8 21 137-157 254-274 (357)
349 3qwb_A Probable quinone oxidor 85.3 0.74 2.5E-05 35.7 3.8 39 2-52 151-191 (334)
350 3ius_A Uncharacterized conserv 84.4 9 0.00031 28.3 9.5 38 1-49 6-43 (286)
351 2c0c_A Zinc binding alcohol de 84.2 1.2 4.2E-05 35.0 4.6 39 2-52 166-206 (362)
352 3oig_A Enoyl-[acyl-carrier-pro 84.1 4.7 0.00016 29.8 7.7 44 3-55 10-54 (266)
353 3vyw_A MNMC2; tRNA wobble urid 84.0 1.9 6.7E-05 33.6 5.6 18 136-153 206-223 (308)
354 3ps9_A TRNA 5-methylaminomethy 83.3 0.5 1.7E-05 40.5 2.1 50 2-51 69-122 (676)
355 2zb4_A Prostaglandin reductase 80.7 1.3 4.5E-05 34.6 3.6 32 119-157 230-261 (357)
356 4a2c_A Galactitol-1-phosphate 80.3 4.6 0.00016 31.2 6.6 23 136-158 240-262 (346)
357 1yb5_A Quinone oxidoreductase; 80.3 1.6 5.5E-05 34.2 3.9 38 2-51 173-212 (351)
358 3llv_A Exopolyphosphatase-rela 80.0 3.1 0.00011 27.6 4.9 40 2-52 8-47 (141)
359 4dkj_A Cytosine-specific methy 79.8 1.3 4.6E-05 35.8 3.4 50 1-56 11-60 (403)
360 3fbg_A Putative arginate lyase 79.4 0.67 2.3E-05 36.2 1.5 19 34-52 175-193 (346)
361 2j8z_A Quinone oxidoreductase; 79.2 2.2 7.7E-05 33.3 4.5 20 138-157 243-262 (354)
362 3pvc_A TRNA 5-methylaminomethy 79.2 1.2 4E-05 38.4 3.0 50 2-51 61-111 (689)
363 1yqd_A Sinapyl alcohol dehydro 78.5 0.41 1.4E-05 37.8 -0.0 39 2-52 190-229 (366)
364 4dup_A Quinone oxidoreductase; 78.2 2 6.9E-05 33.6 3.9 39 2-52 170-210 (353)
365 2eez_A Alanine dehydrogenase; 77.7 0.84 2.9E-05 36.3 1.6 40 2-52 168-207 (369)
366 4eez_A Alcohol dehydrogenase 1 77.1 3.8 0.00013 31.7 5.2 40 2-52 166-206 (348)
367 3fwz_A Inner membrane protein 77.0 2.9 9.9E-05 28.0 4.0 40 2-52 9-48 (140)
368 2dph_A Formaldehyde dismutase; 75.3 2.9 9.9E-05 33.2 4.1 39 2-52 188-228 (398)
369 3iht_A S-adenosyl-L-methionine 75.0 3.1 0.0001 29.5 3.6 30 2-42 43-72 (174)
370 3swr_A DNA (cytosine-5)-methyl 74.8 3.2 0.00011 37.6 4.6 43 1-55 541-584 (1002)
371 3grk_A Enoyl-(acyl-carrier-pro 74.3 15 0.00053 27.6 7.9 43 2-53 33-76 (293)
372 3krt_A Crotonyl COA reductase; 73.9 5.8 0.0002 32.2 5.7 39 2-52 231-271 (456)
373 1lss_A TRK system potassium up 73.7 7 0.00024 25.4 5.2 41 1-52 5-45 (140)
374 3ggo_A Prephenate dehydrogenas 73.6 13 0.00044 28.6 7.4 40 1-51 34-75 (314)
375 1pjc_A Protein (L-alanine dehy 73.4 1.2 4E-05 35.3 1.4 42 2-54 169-210 (361)
376 1boo_A Protein (N-4 cytosine-s 72.5 1.1 3.8E-05 34.9 1.0 68 66-155 14-83 (323)
377 3k31_A Enoyl-(acyl-carrier-pro 72.2 11 0.00037 28.5 6.6 45 2-55 32-77 (296)
378 2vhw_A Alanine dehydrogenase; 72.1 1.2 4.2E-05 35.5 1.2 41 2-53 170-210 (377)
379 1m6y_A S-adenosyl-methyltransf 72.0 0.35 1.2E-05 37.6 -2.0 36 131-166 220-255 (301)
380 4ft4_B DNA (cytosine-5)-methyl 71.3 3.7 0.00012 35.9 4.1 48 1-54 213-260 (784)
381 3pi7_A NADH oxidoreductase; gr 70.3 6 0.0002 30.7 4.8 19 34-52 189-207 (349)
382 3e8x_A Putative NAD-dependent 69.8 14 0.00048 26.5 6.5 40 1-50 22-61 (236)
383 3o26_A Salutaridine reductase; 69.2 19 0.00064 26.8 7.3 43 5-56 16-58 (311)
384 3gqv_A Enoyl reductase; medium 68.9 7.9 0.00027 30.4 5.3 38 2-52 167-206 (371)
385 4fn4_A Short chain dehydrogena 68.2 22 0.00075 26.6 7.4 47 3-58 9-55 (254)
386 3l77_A Short-chain alcohol deh 68.1 23 0.00077 25.3 7.4 45 2-55 3-47 (235)
387 3abi_A Putative uncharacterize 67.9 6.6 0.00022 30.8 4.6 41 1-53 17-57 (365)
388 2gdz_A NAD+-dependent 15-hydro 66.9 17 0.00058 26.7 6.6 40 6-54 12-51 (267)
389 3tqh_A Quinone oxidoreductase; 66.4 5.9 0.0002 30.3 4.0 17 139-155 228-244 (321)
390 3l4b_C TRKA K+ channel protien 66.3 8.4 0.00029 27.6 4.6 41 1-52 1-41 (218)
391 2f1k_A Prephenate dehydrogenas 66.2 15 0.00052 27.2 6.2 40 1-51 1-40 (279)
392 3is3_A 17BETA-hydroxysteroid d 65.0 32 0.0011 25.3 7.8 42 6-56 23-65 (270)
393 1kol_A Formaldehyde dehydrogen 64.4 8.5 0.00029 30.4 4.7 39 2-52 188-228 (398)
394 3nbm_A PTS system, lactose-spe 63.7 21 0.00073 23.1 5.7 20 1-21 7-26 (108)
395 3v2g_A 3-oxoacyl-[acyl-carrier 63.4 27 0.00093 25.9 7.2 42 5-55 35-77 (271)
396 3ic5_A Putative saccharopine d 63.1 8.9 0.0003 24.0 3.8 40 1-51 6-46 (118)
397 3pk0_A Short-chain dehydrogena 63.1 29 0.00098 25.5 7.2 43 5-56 14-56 (262)
398 3av4_A DNA (cytosine-5)-methyl 63.1 7.2 0.00025 36.4 4.4 42 1-55 852-895 (1330)
399 3qiv_A Short-chain dehydrogena 62.8 32 0.0011 24.8 7.3 42 6-56 14-55 (253)
400 3h7a_A Short chain dehydrogena 62.1 24 0.00081 25.8 6.5 44 5-57 11-54 (252)
401 1uuf_A YAHK, zinc-type alcohol 61.6 9.3 0.00032 30.0 4.4 39 2-52 197-236 (369)
402 4g81_D Putative hexonate dehyd 60.5 26 0.00088 26.2 6.5 47 3-58 11-57 (255)
403 3c85_A Putative glutathione-re 59.8 11 0.00038 26.0 4.2 39 2-51 41-80 (183)
404 3ucx_A Short chain dehydrogena 59.4 41 0.0014 24.6 7.5 42 6-56 16-57 (264)
405 1fmc_A 7 alpha-hydroxysteroid 58.7 34 0.0012 24.6 6.8 41 6-55 16-56 (255)
406 4e21_A 6-phosphogluconate dehy 58.7 7.7 0.00026 30.7 3.4 40 1-51 23-62 (358)
407 3rkr_A Short chain oxidoreduct 58.4 37 0.0013 24.8 7.1 42 6-56 34-75 (262)
408 1g0o_A Trihydroxynaphthalene r 57.8 32 0.0011 25.5 6.7 32 5-45 33-64 (283)
409 3jv7_A ADH-A; dehydrogenase, n 57.7 14 0.00049 28.4 4.8 40 2-52 174-214 (345)
410 3tfo_A Putative 3-oxoacyl-(acy 57.5 40 0.0014 24.9 7.1 44 4-56 7-50 (264)
411 4fs3_A Enoyl-[acyl-carrier-pro 57.5 45 0.0015 24.4 7.4 46 3-57 9-55 (256)
412 3lyl_A 3-oxoacyl-(acyl-carrier 57.1 46 0.0016 23.8 7.3 43 6-57 10-52 (247)
413 3tjr_A Short chain dehydrogena 56.6 44 0.0015 25.1 7.4 43 6-57 36-78 (301)
414 3sju_A Keto reductase; short-c 56.4 45 0.0015 24.7 7.3 43 5-56 28-70 (279)
415 4dry_A 3-oxoacyl-[acyl-carrier 56.2 38 0.0013 25.2 6.9 43 5-56 37-79 (281)
416 3rih_A Short chain dehydrogena 56.2 29 0.00097 26.2 6.2 44 4-56 44-87 (293)
417 3imf_A Short chain dehydrogena 56.1 34 0.0011 25.0 6.5 41 6-55 11-51 (257)
418 4dcm_A Ribosomal RNA large sub 55.9 34 0.0011 27.0 6.8 96 2-156 41-136 (375)
419 3l9w_A Glutathione-regulated p 55.8 16 0.00054 29.4 4.9 41 1-52 5-45 (413)
420 3c24_A Putative oxidoreductase 55.8 32 0.0011 25.6 6.4 42 1-52 12-53 (286)
421 4fc7_A Peroxisomal 2,4-dienoyl 55.3 52 0.0018 24.3 7.5 43 4-55 30-72 (277)
422 1yb1_A 17-beta-hydroxysteroid 55.2 50 0.0017 24.2 7.4 41 6-55 36-76 (272)
423 3v8b_A Putative dehydrogenase, 54.8 47 0.0016 24.7 7.2 42 5-55 32-73 (283)
424 4egf_A L-xylulose reductase; s 54.8 44 0.0015 24.5 7.0 43 5-56 24-66 (266)
425 3awd_A GOX2181, putative polyo 54.5 54 0.0018 23.5 7.4 41 6-55 18-58 (260)
426 4g65_A TRK system potassium up 54.3 14 0.00047 30.2 4.3 43 1-54 4-46 (461)
427 3d1l_A Putative NADP oxidoredu 54.3 52 0.0018 24.0 7.3 41 1-52 11-52 (266)
428 2eih_A Alcohol dehydrogenase; 54.1 18 0.00063 27.8 4.9 39 2-52 169-209 (343)
429 3f1l_A Uncharacterized oxidore 54.0 44 0.0015 24.2 6.8 44 4-56 15-58 (252)
430 3i1j_A Oxidoreductase, short c 53.5 49 0.0017 23.6 7.0 43 6-57 19-61 (247)
431 2jah_A Clavulanic acid dehydro 53.3 59 0.002 23.4 7.4 42 5-55 11-52 (247)
432 3r1i_A Short-chain type dehydr 53.2 40 0.0014 25.0 6.5 42 6-56 37-78 (276)
433 1xu9_A Corticosteroid 11-beta- 53.0 49 0.0017 24.4 7.0 43 3-55 31-73 (286)
434 3gaf_A 7-alpha-hydroxysteroid 53.0 42 0.0014 24.5 6.6 43 5-56 16-58 (256)
435 3afn_B Carbonyl reductase; alp 52.9 36 0.0012 24.4 6.2 44 2-55 9-53 (258)
436 3o38_A Short chain dehydrogena 52.7 61 0.0021 23.5 7.4 40 8-56 29-69 (266)
437 3lf2_A Short chain oxidoreduct 52.2 63 0.0022 23.6 7.5 44 4-56 11-54 (265)
438 1rjw_A ADH-HT, alcohol dehydro 51.9 23 0.0008 27.1 5.1 39 2-52 167-206 (339)
439 4ibo_A Gluconate dehydrogenase 51.4 44 0.0015 24.7 6.5 43 5-56 30-72 (271)
440 1piw_A Hypothetical zinc-type 51.3 14 0.00047 28.7 3.8 39 2-52 182-221 (360)
441 3ioy_A Short-chain dehydrogena 51.1 51 0.0017 25.0 7.0 43 5-56 12-54 (319)
442 2hwk_A Helicase NSP2; rossman 50.7 10 0.00035 29.5 2.7 43 118-160 205-258 (320)
443 2qq5_A DHRS1, dehydrogenase/re 50.4 57 0.0019 23.7 6.9 41 6-55 10-50 (260)
444 3enk_A UDP-glucose 4-epimerase 50.4 20 0.00067 27.1 4.5 40 2-51 7-46 (341)
445 2ae2_A Protein (tropinone redu 50.2 65 0.0022 23.3 7.2 41 6-55 14-54 (260)
446 3tox_A Short chain dehydrogena 50.0 43 0.0015 24.9 6.3 42 5-55 12-53 (280)
447 2rhc_B Actinorhodin polyketide 49.5 70 0.0024 23.5 7.4 42 5-55 26-67 (277)
448 3ftp_A 3-oxoacyl-[acyl-carrier 49.1 58 0.002 24.0 6.9 45 4-57 31-75 (270)
449 3l6e_A Oxidoreductase, short-c 48.8 65 0.0022 23.1 6.9 43 3-54 5-47 (235)
450 3svt_A Short-chain type dehydr 48.7 67 0.0023 23.6 7.2 43 5-56 15-57 (281)
451 1y1p_A ARII, aldehyde reductas 48.7 67 0.0023 23.9 7.3 42 2-53 13-54 (342)
452 1ae1_A Tropinone reductase-I; 48.6 75 0.0026 23.3 7.4 41 6-55 26-66 (273)
453 1zsy_A Mitochondrial 2-enoyl t 48.3 28 0.00095 26.9 5.1 17 140-156 254-270 (357)
454 3dqp_A Oxidoreductase YLBE; al 48.3 25 0.00085 24.8 4.5 35 1-45 1-35 (219)
455 1w6u_A 2,4-dienoyl-COA reducta 48.2 67 0.0023 23.7 7.1 41 6-55 31-71 (302)
456 1zem_A Xylitol dehydrogenase; 47.9 74 0.0025 23.1 7.3 41 6-55 12-52 (262)
457 1xg5_A ARPG836; short chain de 47.8 76 0.0026 23.2 7.3 43 5-56 36-78 (279)
458 2hcy_A Alcohol dehydrogenase 1 47.5 16 0.00055 28.2 3.6 39 2-52 172-212 (347)
459 4imr_A 3-oxoacyl-(acyl-carrier 47.4 44 0.0015 24.8 5.9 44 4-56 36-79 (275)
460 1geg_A Acetoin reductase; SDR 47.4 77 0.0026 22.9 7.5 41 6-55 7-47 (256)
461 3nyw_A Putative oxidoreductase 47.0 59 0.002 23.6 6.5 43 5-56 11-53 (250)
462 3ppi_A 3-hydroxyacyl-COA dehyd 46.7 68 0.0023 23.5 6.9 40 6-54 35-74 (281)
463 3ai3_A NADPH-sorbose reductase 46.4 81 0.0028 22.8 7.2 41 6-55 12-52 (263)
464 1iy8_A Levodione reductase; ox 46.3 82 0.0028 22.9 7.3 41 6-55 18-58 (267)
465 3pxx_A Carveol dehydrogenase; 46.2 81 0.0028 23.0 7.3 42 5-55 14-67 (287)
466 3sx2_A Putative 3-ketoacyl-(ac 45.9 82 0.0028 23.0 7.3 30 5-43 17-46 (278)
467 3oj0_A Glutr, glutamyl-tRNA re 45.9 56 0.0019 21.4 5.8 42 1-53 22-63 (144)
468 3v2h_A D-beta-hydroxybutyrate 45.5 85 0.0029 23.2 7.3 42 5-55 29-71 (281)
469 3cxt_A Dehydrogenase with diff 45.3 81 0.0028 23.5 7.2 42 5-55 38-79 (291)
470 3ew7_A LMO0794 protein; Q8Y8U8 44.8 30 0.001 24.1 4.5 38 1-48 1-38 (221)
471 4b4o_A Epimerase family protei 44.8 18 0.00062 26.9 3.4 33 1-43 1-33 (298)
472 1vl5_A Unknown conserved prote 44.8 12 0.0004 27.3 2.3 30 69-98 89-118 (260)
473 3pgx_A Carveol dehydrogenase; 44.7 88 0.003 22.9 7.3 43 4-55 18-73 (280)
474 2g1u_A Hypothetical protein TM 44.5 20 0.00068 24.1 3.3 37 1-48 20-56 (155)
475 1ja9_A 4HNR, 1,3,6,8-tetrahydr 44.3 67 0.0023 23.2 6.5 43 3-55 24-67 (274)
476 2zat_A Dehydrogenase/reductase 44.1 88 0.003 22.6 7.3 41 6-55 19-59 (260)
477 3guy_A Short-chain dehydrogena 44.1 33 0.0011 24.4 4.7 44 1-53 1-44 (230)
478 1g60_A Adenine-specific methyl 43.7 8.5 0.00029 28.7 1.4 24 131-154 49-72 (260)
479 3t7c_A Carveol dehydrogenase; 43.1 97 0.0033 23.1 7.4 30 5-43 32-61 (299)
480 1mxh_A Pteridine reductase 2; 43.0 94 0.0032 22.6 7.2 41 6-55 16-57 (276)
481 1xkq_A Short-chain reductase f 42.9 90 0.0031 22.9 7.1 42 5-55 10-51 (280)
482 4fgs_A Probable dehydrogenase 42.6 77 0.0026 23.8 6.6 43 3-54 31-73 (273)
483 1vl8_A Gluconate 5-dehydrogena 42.5 97 0.0033 22.6 7.3 41 5-54 25-65 (267)
484 4hg2_A Methyltransferase type 42.5 12 0.0004 28.0 2.0 29 69-97 85-113 (257)
485 2pnf_A 3-oxoacyl-[acyl-carrier 42.5 88 0.003 22.1 6.9 40 6-54 12-51 (248)
486 3uve_A Carveol dehydrogenase ( 42.4 99 0.0034 22.7 7.3 31 4-43 14-44 (286)
487 1gu7_A Enoyl-[acyl-carrier-pro 42.4 15 0.00051 28.5 2.7 17 141-157 260-276 (364)
488 1iz0_A Quinone oxidoreductase; 42.4 16 0.00056 27.4 2.8 39 2-52 128-168 (302)
489 3t4x_A Oxidoreductase, short c 42.0 96 0.0033 22.6 7.1 42 6-56 15-56 (267)
490 1e7w_A Pteridine reductase; di 41.7 1E+02 0.0036 22.8 7.4 43 4-55 12-55 (291)
491 4eso_A Putative oxidoreductase 41.7 89 0.003 22.6 6.8 41 5-54 12-52 (255)
492 1xhl_A Short-chain dehydrogena 41.4 98 0.0034 23.1 7.2 42 5-55 30-71 (297)
493 1vj0_A Alcohol dehydrogenase, 41.4 34 0.0011 26.8 4.6 39 2-52 198-238 (380)
494 2cfc_A 2-(R)-hydroxypropyl-COM 41.2 91 0.0031 22.1 6.7 40 6-54 7-46 (250)
495 2o57_A Putative sarcosine dime 41.1 15 0.00051 27.4 2.4 31 68-98 135-165 (297)
496 4da9_A Short-chain dehydrogena 41.1 1.1E+02 0.0036 22.6 7.4 44 4-56 32-76 (280)
497 3i6i_A Putative leucoanthocyan 41.1 19 0.00064 27.5 3.0 33 2-44 12-44 (346)
498 3ek2_A Enoyl-(acyl-carrier-pro 40.7 85 0.0029 22.6 6.6 43 2-53 16-59 (271)
499 2h6e_A ADH-4, D-arabinose 1-de 40.6 35 0.0012 26.2 4.5 41 2-52 173-214 (344)
500 3h2s_A Putative NADH-flavin re 40.2 45 0.0015 23.3 4.8 38 1-48 1-38 (224)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=3.4e-19 Score=138.37 Aligned_cols=112 Identities=14% Similarity=0.195 Sum_probs=93.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+.. ++.+++|+|+|+.|++.|++++...+.
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~---------~~~~v~gvD~s~~ml~~A~~~~~~~~~--------------------- 121 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHH---------DNCKIIAIDNSPAMIERCRRHIDAYKA--------------------- 121 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCS---------SSCEEEEEESCHHHHHHHHHHHHTSCC---------------------
T ss_pred CEEEEEeCCCCHHHHHHHHhcCC---------CCCEEEEEECCHHHHHHHHHHHHhhcc---------------------
Confidence 37999999999999999987631 367899999999999999999876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+.++|..++++. .||+|++..++++++. ...+|++++++|||||.|++.+..
T Consensus 122 -------------------~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 122 -------------------PTPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp -------------------SSCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -------------------CceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 14688888998887764 5999999999998864 457899999999999999999877
Q ss_pred ccCCc
Q psy889 159 HVNNS 163 (167)
Q Consensus 159 ~~~~~ 163 (167)
..+.+
T Consensus 181 ~~~~~ 185 (261)
T 4gek_A 181 SFEDA 185 (261)
T ss_dssp CCSSH
T ss_pred CCCCH
Confidence 66543
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.77 E-value=8.7e-19 Score=134.80 Aligned_cols=108 Identities=23% Similarity=0.350 Sum_probs=94.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+.
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~--------------------- 84 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPF-------------VKKVVAFDLTEDILKVARAFIEGNGH--------------------- 84 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeCCCCHHHHHHHHh-------------CCEEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 47999999999999999874 35899999999999999998876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|.+.+++.+++||+|++..+++++++...++++++++|||||++++.+...+
T Consensus 85 --------------------~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 85 --------------------QQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp --------------------CSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred --------------------CceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 468888889888888888999999999999999999999999999999999999887665
Q ss_pred CC
Q psy889 161 NN 162 (167)
Q Consensus 161 ~~ 162 (167)
+.
T Consensus 145 ~~ 146 (260)
T 1vl5_A 145 EN 146 (260)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=5.9e-18 Score=126.70 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=97.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... +..+++++|+|+.+++.++++....+.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 87 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVG----------EKGKVYAIDVQEEMVNYAWEKVNKLGL--------------------- 87 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHT----------TTCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEEecCCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999999763 357899999999999999999877664
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|....+..+++||+|++..+++++++...++++++++|+|||.+++.++...
T Consensus 88 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 88 --------------------KNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp --------------------TTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred --------------------CcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 468888888888888888999999999999999999999999999999999999987755
Q ss_pred C
Q psy889 161 N 161 (167)
Q Consensus 161 ~ 161 (167)
.
T Consensus 148 ~ 148 (219)
T 3dh0_A 148 E 148 (219)
T ss_dssp C
T ss_pred c
Confidence 4
No 4
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.74 E-value=5.8e-18 Score=128.96 Aligned_cols=108 Identities=27% Similarity=0.390 Sum_probs=95.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+.
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 68 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPY-------------VQECIGVDATKEMVEVASSFAQEKGV--------------------- 68 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEEccCcCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999999874 45899999999999999998876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|.+.+++.+++||+|++..+++++++...++++++++|||||++++.+...+
T Consensus 69 --------------------~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 69 --------------------ENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp --------------------CSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred --------------------CCeEEEecccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 467888888888888888999999999999999999999999999999999999887765
Q ss_pred CC
Q psy889 161 NN 162 (167)
Q Consensus 161 ~~ 162 (167)
+.
T Consensus 129 ~~ 130 (239)
T 1xxl_A 129 ED 130 (239)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.74 E-value=1.1e-18 Score=135.18 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=86.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|..+..+++. +.+++|+|+|+.|++.|+++
T Consensus 42 ~vLDvGcGtG~~~~~l~~~-------------~~~v~gvD~s~~ml~~a~~~---------------------------- 80 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLAEF-------------FERVHAVDPGEAQIRQALRH---------------------------- 80 (257)
T ss_dssp EEEEESCTTTTTHHHHHTT-------------CSEEEEEESCHHHHHTCCCC----------------------------
T ss_pred CEEEEcCCCCHHHHHHHHh-------------CCEEEEEeCcHHhhhhhhhc----------------------------
Confidence 7999999999999999873 57899999999999876521
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecccC
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (167)
.++.+...+.+++++.+++||+|++..++|++ +..+++++++|+|||||.|++..+..+.
T Consensus 81 -------------------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 81 -------------------PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp -------------------TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred -------------------CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 46888899999999999999999999999877 4788999999999999999998876543
No 6
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.74 E-value=9.9e-18 Score=131.17 Aligned_cols=109 Identities=17% Similarity=0.044 Sum_probs=96.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+.
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 130 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKF------------GVSIDCLNIAPVQNKRNEEYNNQAGL--------------------- 130 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHHHh------------CCEEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 479999999999999999876 56899999999999999998876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
..++.+...|...+++.+++||+|++..+++++++...++++++++|||||++++.+....
T Consensus 131 -------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 131 -------------------ADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp -------------------TTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -------------------CcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 1468888899988888888999999999999999999999999999999999999887654
Q ss_pred C
Q psy889 161 N 161 (167)
Q Consensus 161 ~ 161 (167)
.
T Consensus 192 ~ 192 (297)
T 2o57_A 192 D 192 (297)
T ss_dssp T
T ss_pred C
Confidence 4
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=5.8e-18 Score=129.54 Aligned_cols=106 Identities=18% Similarity=0.101 Sum_probs=93.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+.
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~--------------------- 84 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDH------------GITGTGIDMSSLFTAQAKRRAEELGV--------------------- 84 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHT------------CCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCCCCHHHHHHHHhc------------CCeEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 489999999999999999876 56899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++.+...|..+.+. +++||+|++..+++++++...++++++++|||||++++.+...
T Consensus 85 -------------------~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 85 -------------------SERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp -------------------TTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred -------------------CcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 1368888888888776 7889999999999999999999999999999999999987543
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.73 E-value=1.3e-17 Score=128.76 Aligned_cols=108 Identities=27% Similarity=0.280 Sum_probs=95.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++....+.
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 109 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATAR------------DVRVTGISISRPQVNQANARATAAGL--------------------- 109 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHHS------------CCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHHhc------------CCEEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 489999999999999998865 57899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
..++.+...|...+++.+++||+|++..+++++++...++++++++|||||++++.++...
T Consensus 110 -------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 110 -------------------ANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp -------------------TTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred -------------------CcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 1468888889888888888999999999999999999999999999999999999887654
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.72 E-value=2.1e-17 Score=126.45 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=93.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +.+++|+|+|+.+++.++++....+.
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 94 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYV------------KGQITGIDLFPDFIEIFNENAVKANC--------------------- 94 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHC------------CSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CeEEEeCCCCCHHHHHHHHhC------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999999876 34899999999999999999877654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|...+++.+++||+|++..+++++ +...++++++++|||||++++.+.+
T Consensus 95 -------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 95 -------------------ADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp -------------------TTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred -------------------CCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 145888899998888888999999999999988 7899999999999999999998865
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.72 E-value=1.8e-17 Score=123.38 Aligned_cols=105 Identities=17% Similarity=0.210 Sum_probs=93.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.. +.+++++|+|+.+++.+++++...+.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~------------~~~v~~~D~s~~~~~~a~~~~~~~~~---------------------- 91 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS------------DFSIRALDFSKHMNEIALKNIADANL---------------------- 91 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS------------EEEEEEEESCHHHHHHHHHHHHHTTC----------------------
T ss_pred EEEEECCCCCHHHHHHHHcC------------CCeEEEEECCHHHHHHHHHHHHhccc----------------------
Confidence 69999999999999998862 67899999999999999999876654
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..++++.+++||+|++..+++++++...++++++++|+|||.+++.+..
T Consensus 92 ------------------~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 92 ------------------NDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp ------------------TTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------------------cCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 14688889999888888889999999999999999999999999999999999997643
No 11
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.1e-17 Score=129.68 Aligned_cols=109 Identities=11% Similarity=0.120 Sum_probs=93.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc-ccCCCCCCcccccccccccCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
.+|||+|||+|..+..+++.+. .+.+++|+|+|+.+++.++++.... +.
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------------- 87 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELK----------PFEQIIGSDLSATMIKTAEVIKEGSPDT-------------------- 87 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSS----------CCSEEEEEESCHHHHHHHHHHHHHCC-C--------------------
T ss_pred CEEEEECCCCCHHHHHHHHhCC----------CCCEEEEEeCCHHHHHHHHHHHHhccCC--------------------
Confidence 4799999999999999997652 3789999999999999999998764 11
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCc------cchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEE
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES------DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
..++.+...|.+++++.. ++||+|++..+++++ +...++++++++|+|||.|+
T Consensus 88 --------------------~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~ 146 (299)
T 3g5t_A 88 --------------------YKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIA 146 (299)
T ss_dssp --------------------CTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEE
Confidence 146888888888877665 789999999999999 99999999999999999999
Q ss_pred EEeeccc
Q psy889 154 CLEFSHV 160 (167)
Q Consensus 154 ~~~~~~~ 160 (167)
+.+++.+
T Consensus 147 i~~~~~~ 153 (299)
T 3g5t_A 147 IWGYADP 153 (299)
T ss_dssp EEEEEEE
T ss_pred EEecCCc
Confidence 9776653
No 12
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.71 E-value=1.1e-17 Score=124.94 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=84.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++. +.+++|+|+|+.|++.|+++....... . ..+
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-------------g~~V~gvD~S~~~l~~a~~~~~~~~~~------~--~~~-------- 74 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-------------GYHVVGAELSEAAVERYFTERGEQPHI------T--SQG-------- 74 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-------------CCEEEEEEECHHHHHHHHHHHCSCSEE------E--EET--------
T ss_pred CEEEEeCCCCcHhHHHHHHC-------------CCeEEEEeCCHHHHHHHHHHccCCccc------c--ccc--------
Confidence 47999999999999999873 568999999999999999875421000 0 000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-cchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-DSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+. .....++.+..+|+.+++..+ ++||+|++..++++++. ..+++++++++|||||+++++.+
T Consensus 75 --~~~-----------~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 75 --DFK-----------VYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp --TEE-----------EEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred --ccc-----------cccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 000 000146788889988887654 78999999888877753 46789999999999999555444
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
.
T Consensus 142 ~ 142 (203)
T 1pjz_A 142 E 142 (203)
T ss_dssp S
T ss_pred e
Confidence 3
No 13
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.71 E-value=3.4e-17 Score=121.58 Aligned_cols=109 Identities=18% Similarity=0.113 Sum_probs=90.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++... +.+++++|+|+.+++.++++....+
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~---------------------- 70 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVED------------GYKTYGIEISDLQLKKAENFSRENN---------------------- 70 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHT------------TCEEEEEECCHHHHHHHHHHHHHHT----------------------
T ss_pred CEEEEECCCCCHHHHHHHHhC------------CCEEEEEECCHHHHHHHHHHHHhcC----------------------
Confidence 479999999999866555432 6789999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....++.+++||+|++..+++++ .+...++++++++|||||.+++.+++
T Consensus 71 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 71 --------------------FKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp --------------------CCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------------------CceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 24677778888777777899999998888888 67899999999999999999999988
Q ss_pred ccCCc
Q psy889 159 HVNNS 163 (167)
Q Consensus 159 ~~~~~ 163 (167)
..+.+
T Consensus 131 ~~~~~ 135 (209)
T 2p8j_A 131 TKDER 135 (209)
T ss_dssp TTSTT
T ss_pred ccchh
Confidence 66543
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.71 E-value=3e-17 Score=126.74 Aligned_cols=105 Identities=21% Similarity=0.198 Sum_probs=93.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. ..+++|+|+|+.+++.++++....+.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 94 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHV------------TGQVTGLDFLSGFIDIFNRNARQSGL--------------------- 94 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTC------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHhcc------------CCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999998852 56899999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..++++.+++||+|++..+++++ +...++++++++|||||++++.+..
T Consensus 95 -------------------~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 95 -------------------QNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp -------------------TTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred -------------------CcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 146888999998888878899999999999888 8899999999999999999998875
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.71 E-value=2e-17 Score=126.78 Aligned_cols=106 Identities=14% Similarity=0.177 Sum_probs=93.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++....
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~----------------------- 101 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY------------GAHTHGIDICSNIVNMANERVSGN----------------------- 101 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHTCCSC-----------------------
T ss_pred CEEEEECCCCCHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHHhhcC-----------------------
Confidence 489999999999999999876 578999999999999999765422
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....++.+++||+|++..+++++ ++...++++++++|||||.+++.++.
T Consensus 102 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 102 --------------------NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp --------------------TTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------------------CCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 25788888888888878899999999999999 88999999999999999999999887
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
.+.
T Consensus 162 ~~~ 164 (266)
T 3ujc_A 162 ATE 164 (266)
T ss_dssp ESC
T ss_pred cCC
Confidence 655
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=4.3e-17 Score=128.82 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=95.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++|+|+++.+++.++++....+.
T Consensus 119 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 165 (312)
T 3vc1_A 119 DTLVDAGCGRGGSMVMAHRRF------------GSRVEGVTLSAAQADFGNRRARELRI--------------------- 165 (312)
T ss_dssp CEEEEESCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCCCHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999999865 57899999999999999999887654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
..++.+...|..++++.+++||+|++..+++++ +...++++++++|||||++++.+.+..
T Consensus 166 -------------------~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 166 -------------------DDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp -------------------TTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -------------------CCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 146889999998888888899999999999988 599999999999999999999887655
Q ss_pred C
Q psy889 161 N 161 (167)
Q Consensus 161 ~ 161 (167)
.
T Consensus 226 ~ 226 (312)
T 3vc1_A 226 P 226 (312)
T ss_dssp T
T ss_pred c
Confidence 4
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=3.2e-17 Score=126.92 Aligned_cols=106 Identities=23% Similarity=0.276 Sum_probs=95.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++....+.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 86 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNN-----------PDAEITSIDISPESLEKARENTEKNGI--------------------- 86 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-----------TTSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CeEEEecCCCCHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999999876 378999999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|...++..+++||+|++..+++++++...++++++++|||||++++.+..
T Consensus 87 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 87 --------------------KNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp --------------------CSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 4688888888888888889999999999999999999999999999999999997754
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.70 E-value=3.2e-17 Score=123.94 Aligned_cols=107 Identities=21% Similarity=0.333 Sum_probs=91.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. ++.+++++|+|+.+++.++++....
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~----------------------- 91 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKY-----------PEATFTLVDMSEKMLEIAKNRFRGN----------------------- 91 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEESCHHHHHHHHHHTCSC-----------------------
T ss_pred CeEEEecCCCCHHHHHHHHhC-----------CCCeEEEEECCHHHHHHHHHhhccC-----------------------
Confidence 489999999999999999976 3789999999999999999876422
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....+.. ++||+|++..+++++++.. .++++++++|||||.+++.++.
T Consensus 92 --------------------~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 92 --------------------LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp --------------------TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3578888888887766 8899999999999987655 5999999999999999999877
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 151 ~~~~ 154 (234)
T 3dtn_A 151 HGET 154 (234)
T ss_dssp BCSS
T ss_pred CCCC
Confidence 6554
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=3.4e-17 Score=127.55 Aligned_cols=106 Identities=17% Similarity=0.223 Sum_probs=91.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+.
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 115 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAER-------------GHQVILCDLSAQMIDRAKQAAEAKGV--------------------- 115 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHC-CC---------------------
T ss_pred CEEEEeCCcchHHHHHHHHC-------------CCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 37999999999999999883 57899999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++.+...|....+ +.+++||+|++..+++++++...++++++++|||||++++.+++.
T Consensus 116 -------------------~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 116 -------------------SDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp -------------------GGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred -------------------CcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 136788888887776 667899999999999999999999999999999999999987653
No 20
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=3e-17 Score=121.60 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=88.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~-------------------------- 83 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL-------------GHQIEGLEPATRLVELARQTH-------------------------- 83 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT-------------TCCEEEECCCHHHHHHHHHHC--------------------------
T ss_pred CeEEEecCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHHhC--------------------------
Confidence 47999999999999999873 568999999999999999763
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+++..+++||+|++..++++++ +...++++++++|+|||++++.++.
T Consensus 84 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 84 --------------------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp --------------------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --------------------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 356777888877777778999999999999886 8899999999999999999998876
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
...
T Consensus 144 ~~~ 146 (203)
T 3h2b_A 144 GPS 146 (203)
T ss_dssp CSS
T ss_pred CCc
Confidence 544
No 21
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.69 E-value=9.1e-17 Score=118.14 Aligned_cols=104 Identities=15% Similarity=0.028 Sum_probs=88.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 79 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAAN-------------GYDVDAWDKNAMSIANVERIKSIENL--------------------- 79 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CeEEEEcCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHhCCC---------------------
Confidence 37999999999999999873 56899999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....+. +++||+|++..++++++ +...++++++++|+|||.+++.+..
T Consensus 80 --------------------~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 80 --------------------DNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp --------------------TTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred --------------------CCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 357788888877766 78899999999998887 7899999999999999998887654
Q ss_pred c
Q psy889 159 H 159 (167)
Q Consensus 159 ~ 159 (167)
.
T Consensus 139 ~ 139 (199)
T 2xvm_A 139 D 139 (199)
T ss_dssp C
T ss_pred c
Confidence 3
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.69 E-value=8.7e-17 Score=120.47 Aligned_cols=110 Identities=13% Similarity=0.054 Sum_probs=88.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ...+++++|+|+.+++.+++++...+...
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~-----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~------------------- 80 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDS-----------FFEQITGVDVSYRSLEIAQERLDRLRLPR------------------- 80 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCT-----------TCSEEEEEESCHHHHHHHHHHHTTCCCCH-------------------
T ss_pred CEEEEeCCCCCHHHHHHHhhC-----------CCCEEEEEECCHHHHHHHHHHHHHhcCCc-------------------
Confidence 479999999999999998865 25789999999999999999876443300
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
....++.+...|....+...++||+|++..+++++++. ..++++++++|||||.+++...
T Consensus 81 -----------------~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 81 -----------------NQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp -----------------HHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -----------------ccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 00026888888887766666889999999999988754 8999999999999998777554
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=4.7e-17 Score=124.46 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=89.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++.. .
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~---~--------------------- 89 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHG------------AKKVLGIDLSERMLTEAKRKTT---S--------------------- 89 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHCC---C---------------------
T ss_pred CEEEEECCCCCHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHhhc---c---------------------
Confidence 479999999999999998853 2389999999999999998764 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|...++..+++||+|++..+++++++...++++++++|||||.+++...+
T Consensus 90 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 90 --------------------PVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp --------------------TTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 4678888888888887889999999999999999999999999999999999996543
No 24
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=1e-16 Score=125.95 Aligned_cols=106 Identities=11% Similarity=0.022 Sum_probs=91.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.++++....+.
T Consensus 74 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 120 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAEY------------DVNVIGLTLSENQYAHDKAMFDEVDS--------------------- 120 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEECCHHHHHHHHHHHHHSCC---------------------
T ss_pred CEEEEeeccCcHHHHHHHHhC------------CCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 489999999999999999976 57899999999999999999877654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc---------HHHHHHHHHHhcCCCcE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR---------IDKALSEAYRVLKPGGR 151 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~---------~~~~l~~~~~~LkpgG~ 151 (167)
..++.+...|..++ +++||+|++..+++++++ ...++++++++|||||.
T Consensus 121 -------------------~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~ 178 (302)
T 3hem_A 121 -------------------PRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGR 178 (302)
T ss_dssp -------------------SSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCE
T ss_pred -------------------CCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcE
Confidence 13678888888765 678999999999998854 47999999999999999
Q ss_pred EEEEeecccC
Q psy889 152 FLCLEFSHVN 161 (167)
Q Consensus 152 l~~~~~~~~~ 161 (167)
+++.++..++
T Consensus 179 l~i~~~~~~~ 188 (302)
T 3hem_A 179 MLLHTITIPD 188 (302)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEeccC
Confidence 9998887654
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.69 E-value=1.3e-16 Score=119.50 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=88.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ...+++++|+|+.+++.+++++...+...
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~-----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~------------------- 80 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDK-----------SFEQITGVDVSYSVLERAKDRLKIDRLPE------------------- 80 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTST-----------TCCEEEEEESCHHHHHHHHHHHTGGGSCH-------------------
T ss_pred CEEEEecCCCCHHHHHHHhcC-----------CCCEEEEEECCHHHHHHHHHHHHhhcccc-------------------
Confidence 479999999999999998865 25789999999999999999886544300
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
....++.+...|....+...++||+|++..+++++++. ..++++++++|||||.+++...
T Consensus 81 -----------------~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 81 -----------------MQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp -----------------HHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -----------------ccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 00026788888887777777899999999999998854 7999999999999997766543
No 26
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.69 E-value=1.6e-16 Score=123.66 Aligned_cols=106 Identities=17% Similarity=0.083 Sum_probs=90.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.++++....+.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvd~s~~~~~~a~~~~~~~~~--------------------- 112 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKY------------DVNVVGLTLSKNQANHVQQLVANSEN--------------------- 112 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHTCCC---------------------
T ss_pred CEEEEECCcccHHHHHHHHHc------------CCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 479999999999999999766 46899999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+++ ++||+|++..+++++ .+...++++++++|||||.+++.++.
T Consensus 113 -------------------~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 113 -------------------LRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp -------------------CSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -------------------CCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 146778888877665 789999999999988 67899999999999999999998877
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
...
T Consensus 171 ~~~ 173 (287)
T 1kpg_A 171 GLH 173 (287)
T ss_dssp ECC
T ss_pred CCC
Confidence 543
No 27
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=4.8e-17 Score=123.82 Aligned_cols=107 Identities=20% Similarity=0.168 Sum_probs=90.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++....+.
T Consensus 81 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 127 (241)
T 2ex4_A 81 SCALDCGAGIGRITKRLLLPL------------FREVDMVDITEDFLVQAKTYLGEEGK--------------------- 127 (241)
T ss_dssp SEEEEETCTTTHHHHHTTTTT------------CSEEEEEESCHHHHHHHHHHTGGGGG---------------------
T ss_pred CEEEEECCCCCHHHHHHHHhc------------CCEEEEEeCCHHHHHHHHHHhhhcCC---------------------
Confidence 379999999999999888754 45899999999999999988765422
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....+..+++||+|++..+++++++ ...++++++++|+|||++++.+..
T Consensus 128 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 128 --------------------RVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp --------------------GEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------------------ceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 3577788888777777778999999999998877 558999999999999999998865
Q ss_pred cc
Q psy889 159 HV 160 (167)
Q Consensus 159 ~~ 160 (167)
..
T Consensus 188 ~~ 189 (241)
T 2ex4_A 188 AQ 189 (241)
T ss_dssp BS
T ss_pred CC
Confidence 44
No 28
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.68 E-value=9e-17 Score=123.08 Aligned_cols=103 Identities=27% Similarity=0.329 Sum_probs=89.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++. ....
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~-~~~~--------------------- 85 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIAR-------------GYRYIALDADAAMLEVFRQKI-AGVD--------------------- 85 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTT-------------TCEEEEEESCHHHHHHHHHHT-TTSC---------------------
T ss_pred CEEEEeCCcCCHHHHHHHHC-------------CCEEEEEECCHHHHHHHHHHh-hccC---------------------
Confidence 47999999999999999873 578999999999999999886 2221
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|...+++.+++||+|++..+++++++...++++++++|||||.+++. +..
T Consensus 86 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~ 143 (263)
T 2yqz_A 86 --------------------RKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQ 143 (263)
T ss_dssp --------------------TTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEE
T ss_pred --------------------CceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecC
Confidence 4688888888888877889999999999999999999999999999999999987 443
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.68 E-value=1.3e-16 Score=120.07 Aligned_cols=111 Identities=24% Similarity=0.266 Sum_probs=92.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+...
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~------------------- 79 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASK-------------GYSVTGIDINSEAIRLAETAARSPGLNQ------------------- 79 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHTTCCSCCS-------------------
T ss_pred CeEEEECCCCCHHHHHHHhC-------------CCeEEEEECCHHHHHHHHHHHHhcCCcc-------------------
Confidence 47999999999999999883 5689999999999999998876543200
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH---HHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID---KALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~---~~l~~~~~~LkpgG~l~~~~~ 157 (167)
....++.+...+....+..+++||+|++..+++++++.. .++++++++|+|||++++.++
T Consensus 80 -----------------~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 80 -----------------KTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp -----------------SSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------ccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 001357888888888888788999999999999998876 899999999999999999887
Q ss_pred ccc
Q psy889 158 SHV 160 (167)
Q Consensus 158 ~~~ 160 (167)
...
T Consensus 143 ~~~ 145 (235)
T 3sm3_A 143 GQN 145 (235)
T ss_dssp BCC
T ss_pred Ccc
Confidence 653
No 30
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.68 E-value=5.2e-17 Score=122.99 Aligned_cols=100 Identities=14% Similarity=0.205 Sum_probs=85.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~------------------------- 85 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEH-------------FNDITCVEASEEAISHAQGRLK------------------------- 85 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTT-------------CSCEEEEESCHHHHHHHHHHSC-------------------------
T ss_pred CcEEEECCCCCHHHHHHHHh-------------CCcEEEEeCCHHHHHHHHHhhh-------------------------
Confidence 37999999999999998873 4579999999999999998753
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHH-HhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY-RVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|.++. ..+++||+|++..+++++++...++++++ ++|||||++++.+.+.
T Consensus 86 --------------------~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 86 --------------------DGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp --------------------SCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred --------------------CCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 1466777777666 35678999999999999999999999999 9999999999987654
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.68 E-value=7.6e-17 Score=125.86 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=91.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.++ .+.+++|+|+|+.+++.++++....+
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~---------------------- 71 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLP----------EGSKYTGIDSGETLLAEARELFRLLP---------------------- 71 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSC----------TTCEEEEEESCHHHHHHHHHHHHSSS----------------------
T ss_pred CeEEEecCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHhcC----------------------
Confidence 4799999999999999988763 25789999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+++. +++||+|++..+++++++...++++++++|||||++++.+..
T Consensus 72 --------------------~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 72 --------------------YDSEFLEGDATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp --------------------SEEEEEESCTTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --------------------CceEEEEcchhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 267888888888776 468999999999999999999999999999999999998765
No 32
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.68 E-value=7.9e-17 Score=122.10 Aligned_cols=103 Identities=21% Similarity=0.268 Sum_probs=90.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.. .
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~---~--------------------- 97 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRT-------------GYKAVGVDISEVMIQKGKERGE---G--------------------- 97 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHTTTC---B---------------------
T ss_pred CeEEEEcCCCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHhhcc---c---------------------
Confidence 47999999999999999883 5689999999999999987631 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|....++.+++||+|++..+++++++...++++++++|+|||++++.+++..
T Consensus 98 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 98 --------------------PDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp --------------------TTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred --------------------CCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 467888888888888789999999999999999999999999999999999999886544
No 33
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=9.2e-17 Score=122.90 Aligned_cols=101 Identities=16% Similarity=0.076 Sum_probs=88.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ++.+++++|+|+.+++.++++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~-----------~~~~v~~~D~s~~~~~~a~~~~-------------------------- 77 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRY-----------GVNVITGIDSDDDMLEKAADRL-------------------------- 77 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHH-----------CTTSEEEEESCHHHHHHHHHHS--------------------------
T ss_pred CEEEEecCcCCHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHhC--------------------------
Confidence 379999999999999999987 3678999999999999999762
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|....+ .+++||+|++..+++++++...++++++++|+|||++++.+...
T Consensus 78 --------------------~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 78 --------------------PNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --------------------TTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --------------------CCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35677788887777 67889999999999999999999999999999999999987643
No 34
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.68 E-value=1.6e-16 Score=118.87 Aligned_cols=101 Identities=15% Similarity=0.222 Sum_probs=86.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++..
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~------------------------- 88 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLA-------------GRTVYGIEPSREMRMIAKEKLP------------------------- 88 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHT-------------TCEEEEECSCHHHHHHHHHHSC-------------------------
T ss_pred CeEEEeCCCCCHHHHHHHhC-------------CCeEEEEeCCHHHHHHHHHhCC-------------------------
Confidence 47999999999999999873 5789999999999999998753
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHH--HHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDK--ALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+++.. ++||+|++..+++++++... ++++++++|||||.+++.+..
T Consensus 89 --------------------~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 89 --------------------KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp --------------------TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred --------------------CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 1466777788777766 88999999999999988776 999999999999999998755
Q ss_pred cc
Q psy889 159 HV 160 (167)
Q Consensus 159 ~~ 160 (167)
..
T Consensus 148 ~~ 149 (220)
T 3hnr_A 148 FA 149 (220)
T ss_dssp BS
T ss_pred cc
Confidence 43
No 35
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.68 E-value=1.2e-16 Score=129.90 Aligned_cols=117 Identities=17% Similarity=0.073 Sum_probs=94.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++... ++.+++|+|+|+.+++.+++++....... .+
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---------~g-------- 137 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVG----------EHGKVIGVDMLDNQLEVARKYVEYHAEKF---------FG-------- 137 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHT----------TTCEEEEEECCHHHHHHHHHTHHHHHHHH---------HS--------
T ss_pred CEEEEecCccCHHHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHHHHHhhhhc---------cc--------
Confidence 3799999999999999999874 36799999999999999999876431000 00
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC------CCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL------PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.....++.+...|...+ ++.+++||+|++..+++++++...++++++++|||||+|++
T Consensus 138 ----------------~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 138 ----------------SPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp ----------------STTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------ccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEE
Confidence 00013677888887776 77788999999999999999999999999999999999999
Q ss_pred Eeeccc
Q psy889 155 LEFSHV 160 (167)
Q Consensus 155 ~~~~~~ 160 (167)
.++...
T Consensus 202 ~~~~~~ 207 (383)
T 4fsd_A 202 SDVYAD 207 (383)
T ss_dssp EEEEES
T ss_pred EEeccc
Confidence 876543
No 36
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.67 E-value=9.3e-17 Score=121.67 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=88.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++ .+.+++|+|+|+.+++.++++....+.
T Consensus 69 ~vLDiGcG~G~~~~~l~~-------------~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------------- 113 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMAS-------------PERFVVGLDISESALAKANETYGSSPK---------------------- 113 (235)
T ss_dssp EEEEETCTTCHHHHHHCB-------------TTEEEEEECSCHHHHHHHHHHHTTSGG----------------------
T ss_pred CEEEeCCCCCHHHHHHHh-------------CCCeEEEEECCHHHHHHHHHHhhccCC----------------------
Confidence 799999999999998876 367899999999999999998865322
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++.+...|..+.+ ...+||+|++..++++++ +...++++++++|||||++++.++..
T Consensus 114 ------------------~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 114 ------------------AEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp ------------------GGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ------------------CcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 146788888887765 345899999999999887 78999999999999999999988765
Q ss_pred c
Q psy889 160 V 160 (167)
Q Consensus 160 ~ 160 (167)
.
T Consensus 175 ~ 175 (235)
T 3lcc_A 175 T 175 (235)
T ss_dssp S
T ss_pred c
Confidence 4
No 37
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.67 E-value=1.2e-16 Score=119.00 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=87.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.+++ .+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~~D~s~~~~~~a~~----~~~--------------------- 89 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-------------ADRVTALDGSAEMIAEAGR----HGL--------------------- 89 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHGG----GCC---------------------
T ss_pred CeEEEECCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHh----cCC---------------------
Confidence 37999999999999999884 4689999999999999986 222
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+. ..+++||+|++..+++++++. ..++++++++|+|||.+++.+++
T Consensus 90 --------------------~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 90 --------------------DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp --------------------TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 4678888888777 667899999999999998874 89999999999999999999987
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
.+.
T Consensus 149 ~~~ 151 (218)
T 3ou2_A 149 DHE 151 (218)
T ss_dssp CCC
T ss_pred CCc
Confidence 754
No 38
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.66 E-value=1.6e-16 Score=122.77 Aligned_cols=121 Identities=11% Similarity=0.056 Sum_probs=84.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++ .+.+++|+|+|+.+++.|+++...... ..+...
T Consensus 70 ~~vLD~GCG~G~~~~~La~-------------~G~~V~gvD~S~~~i~~a~~~~~~~~~-----------~~~~~~---- 121 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFAD-------------RGHTVVGVEISEIGIREFFAEQNLSYT-----------EEPLAE---- 121 (252)
T ss_dssp CEEEETTCTTCTHHHHHHH-------------TTCEEEEECSCHHHHHHHHHHTTCCEE-----------EEECTT----
T ss_pred CeEEEeCCCCcHHHHHHHH-------------CCCeEEEEECCHHHHHHHHHhcccccc-----------cccccc----
Confidence 3799999999999999987 367899999999999999876531000 000000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-cchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+.+..+. ....++.+.++|+..++... ++||+|++..++++++ +..+++++++++|||||+|+++.+
T Consensus 122 ~~~~~~~~---------~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 122 IAGAKVFK---------SSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp STTCEEEE---------ETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccccccc---------cCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 00000000 00146888889988877653 7899999887777765 356789999999999999986655
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
.
T Consensus 193 ~ 193 (252)
T 2gb4_A 193 S 193 (252)
T ss_dssp E
T ss_pred e
Confidence 4
No 39
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.66 E-value=8.9e-17 Score=126.21 Aligned_cols=144 Identities=15% Similarity=0.147 Sum_probs=85.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCC--CCCcccccccc-cccC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPV--PNPRLRFLEAN-AEEL 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~d-~~~l 77 (167)
.+|||+|||+|.++..++..+. ..+++|+|+|+.+++.|++++........ +.....+..+. .++-
T Consensus 48 ~~VLDiGCG~G~~~~~la~~~~-----------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKWG-----------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEG 116 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHTC-----------CSEEEEEESCHHHHHHHHHTC--------------------------
T ss_pred CcEEEeCCCCCHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 4799999999999999999873 67999999999999999988754331000 00000000000 0000
Q ss_pred CCCCCCCceeeeeeccccc--------------cCCCCceEEeecccCCCC-----CCccchhhHhhhhcccccc-----
Q psy889 78 PIESDSYSAYTIAFGIRNI--------------DIPNPRLRFLEANAEELP-----IESDSYSAYTIAFGIRNVT----- 133 (167)
Q Consensus 78 ~~~~~~fd~~~~~~~~~~~--------------~~~~~~~~~~~~d~~~~~-----~~~~~~D~v~~~~~~~~~~----- 133 (167)
.......+.+..+...... .....++.+...|..... ...++||+|+|..+++|+.
T Consensus 117 ~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~ 196 (292)
T 3g07_A 117 TTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGD 196 (292)
T ss_dssp -------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHH
T ss_pred cccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCH
Confidence 0000000000000000000 001146888888876543 4678899999999887664
Q ss_pred -cHHHHHHHHHHhcCCCcEEEEE
Q psy889 134 -RIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 134 -~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
+..++|++++++|+|||+|++.
T Consensus 197 ~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 197 EGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCcEEEEe
Confidence 7889999999999999999984
No 40
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.66 E-value=5.3e-16 Score=122.61 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=91.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++....+.
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 138 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERF------------DVNVIGLTLSKNQHARCEQVLASIDT--------------------- 138 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHTSCC---------------------
T ss_pred CEEEEEcccchHHHHHHHHHC------------CCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 479999999999999999876 56899999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+++ ++||+|++..+++++ ++...++++++++|||||.+++.++.
T Consensus 139 -------------------~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 139 -------------------NRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp -------------------SSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -------------------CCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 135778788876664 679999999999988 67899999999999999999998887
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
...
T Consensus 197 ~~~ 199 (318)
T 2fk8_A 197 SYH 199 (318)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 41
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=1.8e-16 Score=114.21 Aligned_cols=99 Identities=20% Similarity=0.232 Sum_probs=86.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.. .+++++|+++.+++.++++ .
T Consensus 20 ~vLDiG~G~G~~~~~l~~~~-------------~~v~~vD~s~~~~~~a~~~-----~---------------------- 59 (170)
T 3i9f_A 20 VIVDYGCGNGFYCKYLLEFA-------------TKLYCIDINVIALKEVKEK-----F---------------------- 59 (170)
T ss_dssp EEEEETCTTCTTHHHHHTTE-------------EEEEEECSCHHHHHHHHHH-----C----------------------
T ss_pred eEEEECCCCCHHHHHHHhhc-------------CeEEEEeCCHHHHHHHHHh-----C----------------------
Confidence 79999999999999998854 3899999999999999987 1
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecccC
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (167)
.++.+...| .++.+++||+|++..+++++++...++++++++|||||++++.++....
T Consensus 60 -------------------~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 60 -------------------DSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp -------------------TTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred -------------------CCcEEEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 456777777 5566788999999999999999999999999999999999999887654
Q ss_pred C
Q psy889 162 N 162 (167)
Q Consensus 162 ~ 162 (167)
.
T Consensus 118 ~ 118 (170)
T 3i9f_A 118 T 118 (170)
T ss_dssp C
T ss_pred c
Confidence 3
No 42
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.66 E-value=8.3e-17 Score=126.11 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=82.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCc--EEEeeCChHHHHHHHHHHHhc-ccCCCCCCcccccccccccCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH--VTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~l~ 78 (167)
+|||+|||+|.++..++..+...- +..+ ++++|+|+.|++.++++.... +. +
T Consensus 55 ~VLDiG~GtG~~~~~~l~~l~~~~-------~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~---~--------------- 109 (292)
T 2aot_A 55 KILSIGGGAGEIDLQILSKVQAQY-------PGVCINNEVVEPSAEQIAKYKELVAKTSNL---E--------------- 109 (292)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHS-------TTCEEEEEEECSCHHHHHHHHHHHHTCSSC---T---------------
T ss_pred eEEEEcCCCCHHHHHHHHHHHhhC-------CCceeeEEEEeCCHHHHHHHHHHHHhccCC---C---------------
Confidence 799999999998876655431000 1343 499999999999999987543 11 0
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCC------CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEE
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP------IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 152 (167)
+.++.+...+.++++ +.+++||+|++..+++++++..+++++++++|||||++
T Consensus 110 ---------------------~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l 168 (292)
T 2aot_A 110 ---------------------NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKM 168 (292)
T ss_dssp ---------------------TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEE
T ss_pred ---------------------cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEE
Confidence 012333444443332 45678999999999999999999999999999999999
Q ss_pred EEEeecc
Q psy889 153 LCLEFSH 159 (167)
Q Consensus 153 ~~~~~~~ 159 (167)
++...+.
T Consensus 169 ~i~~~~~ 175 (292)
T 2aot_A 169 LIIVVSG 175 (292)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 9986553
No 43
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=1.5e-16 Score=118.84 Aligned_cols=100 Identities=13% Similarity=0.192 Sum_probs=85.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....
T Consensus 54 ~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~------------------------ 96 (216)
T 3ofk_A 54 NGLEIGCAAGAFTEKLAPH-------------CKRLTVIDVMPRAIGRACQRTKRW------------------------ 96 (216)
T ss_dssp EEEEECCTTSHHHHHHGGG-------------EEEEEEEESCHHHHHHHHHHTTTC------------------------
T ss_pred cEEEEcCCCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhcccC------------------------
Confidence 7999999999999999874 457999999999999999886532
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH---HHHHHHHHHhcCCCcEEEEEeec
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI---DKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+.+ .+++||+|++..+++++++. ..++++++++|||||.+++.+..
T Consensus 97 -------------------~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 97 -------------------SHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp -------------------SSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -------------------CCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 35788888887776 56889999999999998875 57799999999999999997644
No 44
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.66 E-value=1.5e-16 Score=125.87 Aligned_cols=111 Identities=10% Similarity=0.135 Sum_probs=78.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++... +.+++|+|+|+.|++.|+++....... .+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~------------~~~v~GiD~S~~~l~~A~~~~~~~~~~----~~-------------- 99 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGE------------IALLVATDPDADAIARGNERYNKLNSG----IK-------------- 99 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHHCC---------------------
T ss_pred CeEEEEecCCcHhHHHHHhcC------------CCeEEEEECCHHHHHHHHHHHHhcccc----cc--------------
Confidence 379999999998776665522 568999999999999999988654320 00
Q ss_pred CCCCceeeeeeccccccCCCCceEEeeccc------CCC--CCCccchhhHhhhhccccc---ccHHHHHHHHHHhcCCC
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANA------EEL--PIESDSYSAYTIAFGIRNV---TRIDKALSEAYRVLKPG 149 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~------~~~--~~~~~~~D~v~~~~~~~~~---~~~~~~l~~~~~~Lkpg 149 (167)
... -++.|...+. +.+ +..+++||+|+|..++|+. .+..+++++++++||||
T Consensus 100 ~~~-----------------~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpG 162 (302)
T 2vdw_A 100 TKY-----------------YKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASG 162 (302)
T ss_dssp -CC-----------------CEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEE
T ss_pred ccc-----------------cccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCC
Confidence 000 0133444443 111 2345789999998888754 45689999999999999
Q ss_pred cEEEEEeec
Q psy889 150 GRFLCLEFS 158 (167)
Q Consensus 150 G~l~~~~~~ 158 (167)
|+|++...+
T Consensus 163 G~~i~~~~~ 171 (302)
T 2vdw_A 163 GKVLITTMD 171 (302)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEeCC
Confidence 999997764
No 45
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.66 E-value=2e-16 Score=120.73 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=88.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++....
T Consensus 95 ~~vLDiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~----------------------- 139 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTKL------------YATTDLLEPVKHMLEEAKRELAGM----------------------- 139 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHHH------------CSEEEEEESCHHHHHHHHHHTTTS-----------------------
T ss_pred CEEEEECCCcCHHHHHHHHhh------------cCEEEEEeCCHHHHHHHHHHhccC-----------------------
Confidence 379999999999999998865 457999999999999999876432
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....++.+++||+|++..+++++ .+...++++++++|||||++++.+..
T Consensus 140 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 140 --------------------PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp --------------------SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred --------------------CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 24677788887777777899999999999998 45889999999999999999998854
No 46
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=2.6e-16 Score=122.30 Aligned_cols=99 Identities=21% Similarity=0.242 Sum_probs=85.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.++++.
T Consensus 59 ~~vLDiGcG~G~~~~~l~~-------------~~~~v~gvD~s~~~~~~a~~~~-------------------------- 99 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQ-------------SGAEVLGTDNAATMIEKARQNY-------------------------- 99 (279)
T ss_dssp CEEEEETCTTSHHHHHHHH-------------TTCEEEEEESCHHHHHHHHHHC--------------------------
T ss_pred CEEEEecCCCCHHHHHHHh-------------CCCeEEEEECCHHHHHHHHhhC--------------------------
Confidence 4799999999999999987 2678999999999999998764
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|.+.++. +++||+|++..+++++++...++++++++|||||++++...+.
T Consensus 100 --------------------~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 100 --------------------PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp --------------------TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred --------------------CCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 235666777777765 5789999999999999999999999999999999999977654
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=4.7e-16 Score=116.63 Aligned_cols=103 Identities=20% Similarity=0.293 Sum_probs=87.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~---------------------- 84 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDY-------------GFEVVGVDISEDMIRKAREYAKSRE---------------------- 84 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTT----------------------
T ss_pred CeEEEEeccCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHhcC----------------------
Confidence 47999999999999988874 3489999999999999999876433
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhc--ccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG--IRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+.+..+++||+|++..+ +++..+...++++++++|+|||.+++.+..
T Consensus 85 --------------------~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 85 --------------------SNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp --------------------CCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 3577788888777766788999999888 566678889999999999999999998765
No 48
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.65 E-value=2.9e-16 Score=114.78 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=77.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-------------~~~v~~vD~s~~~l~~a~~~~~~~~~--------------------- 69 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-------------SKKVYAFDVQEQALGKTSQRLSDLGI--------------------- 69 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEEcCCCCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999999873 57899999999999999999976654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CCccchhhHhhhhc-cc--------ccccHHHHHHHHHHhcCCCc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFG-IR--------NVTRIDKALSEAYRVLKPGG 150 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~-~~--------~~~~~~~~l~~~~~~LkpgG 150 (167)
.++.+...+...+. ..+++||+|+++.. +. .......++++++++|||||
T Consensus 70 --------------------~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 129 (185)
T 3mti_A 70 --------------------ENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGG 129 (185)
T ss_dssp --------------------CCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEE
T ss_pred --------------------CcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCc
Confidence 34566555544432 23566888866521 11 12345678899999999999
Q ss_pred EEEEEeec
Q psy889 151 RFLCLEFS 158 (167)
Q Consensus 151 ~l~~~~~~ 158 (167)
++++..+.
T Consensus 130 ~l~i~~~~ 137 (185)
T 3mti_A 130 RLAIMIYY 137 (185)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEeC
Confidence 99998765
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.65 E-value=1.5e-16 Score=125.38 Aligned_cols=110 Identities=12% Similarity=-0.015 Sum_probs=91.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++.... ++.+++++|+|+.+++.++++....+.
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 168 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSAC----------PGVQLVGIDYDPEALDGATRLAAGHAL--------------------- 168 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTC----------TTCEEEEEESCHHHHHHHHHHHTTSTT---------------------
T ss_pred CEEEEecCCCCHHHHHHHHhcC----------CCCeEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 3799999999999988853221 378999999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHH---HHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDK---ALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~---~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..++++. ++||+|++..+++++++... ++++++++|||||++++.++
T Consensus 169 -------------------~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 169 -------------------AGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp -------------------GGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred -------------------CCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 13588888888888776 89999999999998877654 79999999999999999887
Q ss_pred cccC
Q psy889 158 SHVN 161 (167)
Q Consensus 158 ~~~~ 161 (167)
..+.
T Consensus 229 ~~~~ 232 (305)
T 3ocj_A 229 TPPP 232 (305)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 6543
No 50
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.65 E-value=1.3e-16 Score=124.39 Aligned_cols=107 Identities=19% Similarity=0.126 Sum_probs=86.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++. +.+++|+|+|+.+++.++++........
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~------------------- 106 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE-------------GFSVTSVDASDKMLKYALKERWNRRKEP------------------- 106 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTTSH-------------------
T ss_pred CEEEEecCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHhhhhccccc-------------------
Confidence 47999999999999999883 5689999999999999998864322100
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC---CCccchhhHhhh-hccccccc-------HHHHHHHHHHhcCCC
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP---IESDSYSAYTIA-FGIRNVTR-------IDKALSEAYRVLKPG 149 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~-~~~~~~~~-------~~~~l~~~~~~Lkpg 149 (167)
...++.+...+...++ +.+++||+|+|. .+++++++ ...++++++++||||
T Consensus 107 ------------------~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkpg 168 (293)
T 3thr_A 107 ------------------AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG 168 (293)
T ss_dssp ------------------HHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEE
T ss_pred ------------------ccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCC
Confidence 0024566677776665 667889999998 89999988 899999999999999
Q ss_pred cEEEEEee
Q psy889 150 GRFLCLEF 157 (167)
Q Consensus 150 G~l~~~~~ 157 (167)
|++++...
T Consensus 169 G~l~~~~~ 176 (293)
T 3thr_A 169 GLLVIDHR 176 (293)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEeC
Confidence 99998654
No 51
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.65 E-value=7.1e-16 Score=114.03 Aligned_cols=104 Identities=21% Similarity=0.228 Sum_probs=85.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~----------------------- 75 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-------------GYEVTAVDQSSVGLAKAKQLAQEKG----------------------- 75 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-------------TCEEEEECSSHHHHHHHHHHHHHHT-----------------------
T ss_pred CEEEECCCCCHhHHHHHhC-------------CCeEEEEECCHHHHHHHHHHHHhcC-----------------------
Confidence 6999999999999988873 5689999999999999999886543
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|....+..+++||+|++........+...++++++++|+|||++++.++...
T Consensus 76 -------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 76 -------------------VKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp -------------------CCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred -------------------CceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 256777788877777778899999854322345678999999999999999999887644
No 52
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=1.8e-16 Score=122.30 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=87.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++ ++.+++|+|+|+.+++.++++
T Consensus 36 ~~vLDiGcG~G~~~~~l~~-------------~~~~v~gvD~s~~~~~~a~~~--------------------------- 75 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALAN-------------QGLFVYAVEPSIVMRQQAVVH--------------------------- 75 (261)
T ss_dssp CEEEEETCTTSHHHHHHHT-------------TTCEEEEECSCHHHHHSSCCC---------------------------
T ss_pred CEEEEEcCcccHHHHHHHh-------------CCCEEEEEeCCHHHHHHHHhc---------------------------
Confidence 4799999999999999987 368999999999998877642
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|.+++++.+++||+|++..+++++++...++++++++|| ||++++.++...
T Consensus 76 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 76 --------------------PQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp --------------------TTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred --------------------cCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 24778888888888888899999999999999999999999999999 999999888654
Q ss_pred C
Q psy889 161 N 161 (167)
Q Consensus 161 ~ 161 (167)
.
T Consensus 135 ~ 135 (261)
T 3ege_A 135 L 135 (261)
T ss_dssp G
T ss_pred h
Confidence 3
No 53
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.64 E-value=3.5e-16 Score=118.43 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=86.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++...
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~------------------------ 88 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHG------------ASYVLGLDLSEKMLARARAAGPD------------------------ 88 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHTSCS------------------------
T ss_pred CEEEEEcCcCCHHHHHHHHCC------------CCeEEEEcCCHHHHHHHHHhccc------------------------
Confidence 479999999999999988742 23899999999999999876431
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|....+..+++||+|++..+++++++...++++++++|+|||++++.+..
T Consensus 89 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 89 --------------------TGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp --------------------SSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------------CCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 2467777888777777788999999999999999999999999999999999997643
No 54
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.64 E-value=1.1e-15 Score=120.41 Aligned_cols=100 Identities=11% Similarity=0.110 Sum_probs=83.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..++.+. .+++++++|+|+++++.|+++++..+.
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~-----------~ga~V~gIDis~~~l~~Ar~~~~~~gl--------------------- 171 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHV-----------YGMRVNVVEIEPDIAELSRKVIEGLGV--------------------- 171 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHT-----------TCCEEEEEESSHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEECCCccHHHHHHHHHc-----------cCCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 489999999998886665554 378999999999999999999887664
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.++.+..+|..+++ +++||+|++... .++..+++++++++|||||++++.+.
T Consensus 172 --------------------~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 172 --------------------DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp --------------------CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --------------------CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 56888888887765 678999987543 57889999999999999999999663
No 55
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.63 E-value=1.2e-15 Score=118.75 Aligned_cols=104 Identities=12% Similarity=0.013 Sum_probs=87.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+.
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~-------------g~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 167 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLL-------------GYDVTSWDHNENSIAFLNETKEKENL--------------------- 167 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CcEEEECCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999999883 56899999999999999998875442
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
++.+...|....+. .++||+|++..++++++ ....++++++++|+|||.+++....
T Consensus 168 ---------------------~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 168 ---------------------NISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp ---------------------CEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred ---------------------ceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 57778888877665 68899999999998774 4679999999999999998876654
Q ss_pred cc
Q psy889 159 HV 160 (167)
Q Consensus 159 ~~ 160 (167)
..
T Consensus 226 ~~ 227 (286)
T 3m70_A 226 ST 227 (286)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 56
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.63 E-value=8.8e-16 Score=119.54 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=88.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. ..+++|+|+|+.+++.++++....+.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~--------------------- 112 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAG------------IGEYYGVDIAEVSINDARVRARNMKR--------------------- 112 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHT------------CSEEEEEESCHHHHHHHHHHHHTSCC---------------------
T ss_pred CeEEEECCCCCHHHHHHHHCC------------CCEEEEEECCHHHHHHHHHHHHhcCC---------------------
Confidence 479999999999999987642 45899999999999999998875443
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCC-CccchhhHhhhhcccc----cccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPI-ESDSYSAYTIAFGIRN----VTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
..++.+...|....++ .+++||+|++..++++ ..+...++++++++|+|||++++.
T Consensus 113 -------------------~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 113 -------------------RFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp -------------------SSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -------------------CccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1357788888877776 5788999999888865 567789999999999999999997
Q ss_pred eec
Q psy889 156 EFS 158 (167)
Q Consensus 156 ~~~ 158 (167)
..+
T Consensus 174 ~~~ 176 (298)
T 1ri5_A 174 VPS 176 (298)
T ss_dssp EEC
T ss_pred ECC
Confidence 755
No 57
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.63 E-value=4.4e-16 Score=119.78 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=84.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~-------------------------- 92 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADS-------------FGTVEGLELSADMLAIARRRN-------------------------- 92 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTT-------------SSEEEEEESCHHHHHHHHHHC--------------------------
T ss_pred CcEEEeCCcCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHhhC--------------------------
Confidence 47999999999999998873 568999999999999999864
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh-cccccc---cHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF-GIRNVT---RIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|+...+. +++||+|++.. ++++++ +...++++++++|||||.+++.+
T Consensus 93 --------------------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 93 --------------------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp --------------------TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred --------------------CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 246777788877766 68899999987 888884 67788999999999999999976
Q ss_pred ecccC
Q psy889 157 FSHVN 161 (167)
Q Consensus 157 ~~~~~ 161 (167)
+..++
T Consensus 152 ~~~~~ 156 (263)
T 3pfg_A 152 WWFPE 156 (263)
T ss_dssp CCCTT
T ss_pred ccChh
Confidence 54443
No 58
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=5.2e-16 Score=115.19 Aligned_cols=105 Identities=23% Similarity=0.306 Sum_probs=83.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++... .
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~------------~~~v~~~D~s~~~~~~a~~~~~~--~--------------------- 88 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGG------------FPNVTSVDYSSVVVAAMQACYAH--V--------------------- 88 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTT------------CCCEEEEESCHHHHHHHHHHTTT--C---------------------
T ss_pred CeEEEECCCCcHHHHHHHHcC------------CCcEEEEeCCHHHHHHHHHhccc--C---------------------
Confidence 479999999999999998853 23899999999999999987642 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc---------------ccHHHHHHHHHHh
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV---------------TRIDKALSEAYRV 145 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~---------------~~~~~~l~~~~~~ 145 (167)
.++.+...|...+++.+++||+|++..+++++ .+...++++++++
T Consensus 89 --------------------~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 148 (215)
T 2pxx_A 89 --------------------PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV 148 (215)
T ss_dssp --------------------TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHh
Confidence 34666666766666666778888876555433 3668999999999
Q ss_pred cCCCcEEEEEeeccc
Q psy889 146 LKPGGRFLCLEFSHV 160 (167)
Q Consensus 146 LkpgG~l~~~~~~~~ 160 (167)
|+|||.+++.+++.+
T Consensus 149 LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 149 LVPGGRFISMTSAAP 163 (215)
T ss_dssp EEEEEEEEEEESCCH
T ss_pred CcCCCEEEEEeCCCc
Confidence 999999999988764
No 59
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=1.1e-16 Score=121.63 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=80.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++.. ..+++++|+|+.+++.|+++....+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~---------------------- 107 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAP------------IDEHWIIECNDGVFQRLRDWAPRQT---------------------- 107 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSC------------EEEEEEEECCHHHHHHHHHHGGGCS----------------------
T ss_pred CeEEEEeccCCHHHHHHHhcC------------CCeEEEEcCCHHHHHHHHHHHHhcC----------------------
Confidence 379999999999999986532 3489999999999999999875433
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhh-hhccc----ccccHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTI-AFGIR----NVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~-~~~~~----~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
.++.+...|..++ ++.+++||+|++ .+.+. +......++++++++|||||+|+
T Consensus 108 --------------------~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 108 --------------------HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp --------------------SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred --------------------CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 3567777777666 666778898887 44321 22334578999999999999999
Q ss_pred EEeec
Q psy889 154 CLEFS 158 (167)
Q Consensus 154 ~~~~~ 158 (167)
+.++.
T Consensus 168 ~~~~~ 172 (236)
T 1zx0_A 168 YCNLT 172 (236)
T ss_dssp ECCHH
T ss_pred EEecC
Confidence 87755
No 60
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.62 E-value=6.6e-16 Score=114.94 Aligned_cols=98 Identities=28% Similarity=0.374 Sum_probs=84.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+ . ..+++++|+|+.+++.++++.
T Consensus 38 ~~vLdiG~G~G~~~~~l----~-----------~~~v~~vD~s~~~~~~a~~~~-------------------------- 76 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL----P-----------YPQKVGVEPSEAMLAVGRRRA-------------------------- 76 (211)
T ss_dssp SEEEEETCTTCHHHHHC----C-----------CSEEEEECCCHHHHHHHHHHC--------------------------
T ss_pred CeEEEECCCCCHhHHhC----C-----------CCeEEEEeCCHHHHHHHHHhC--------------------------
Confidence 47999999999987766 2 337999999999999999775
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|...+++.+++||+|++..+++++++...++++++++|||||.+++.+.+.
T Consensus 77 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 77 --------------------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp --------------------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred --------------------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 13566777777777777899999999999999999999999999999999999987654
No 61
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.62 E-value=5.5e-16 Score=117.85 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=80.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~--------------------------- 82 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-------------GIESIGVDINEDMIKFCEGK--------------------------- 82 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-------------TCCEEEECSCHHHHHHHHTT---------------------------
T ss_pred CeEEEEeCCCCHHHHHHHhC-------------CCcEEEEECCHHHHHHHHhh---------------------------
Confidence 47999999999999988874 46799999999999998854
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
+.+...|..+. ++.+++||+|++..++++++ +...++++++++|||||++++..
T Consensus 83 ----------------------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 83 ----------------------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp ----------------------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred ----------------------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 33445555443 56678899999999999998 56999999999999999999977
Q ss_pred ecc
Q psy889 157 FSH 159 (167)
Q Consensus 157 ~~~ 159 (167)
.+.
T Consensus 141 ~~~ 143 (240)
T 3dli_A 141 PNP 143 (240)
T ss_dssp ECT
T ss_pred CCc
Confidence 653
No 62
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=3e-15 Score=111.14 Aligned_cols=103 Identities=12% Similarity=0.033 Sum_probs=84.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +..+++++|+|+.+++.++++....+.
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 89 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLM-----------PNGRIFALERNPQYLGFIRDNLKKFVA--------------------- 89 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-----------TTSEEEEEECCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEECCCCCHHHHHHHHHC-----------CCCEEEEEeCCHHHHHHHHHHHHHhCC---------------------
Confidence 479999999999999999876 368899999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+.......||+|++...+. +...++++++++|+|||++++....
T Consensus 90 --------------------~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 90 --------------------RNVTLVEAFAPEGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp --------------------TTEEEEECCTTTTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred --------------------CcEEEEeCChhhhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 467777777755433336799998876543 7889999999999999999997654
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.62 E-value=8.3e-16 Score=114.51 Aligned_cols=97 Identities=23% Similarity=0.154 Sum_probs=81.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~------------------------- 86 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-------------GFDVDATDGSPELAAEASRRLG------------------------- 86 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHT-------------------------
T ss_pred CcEEEECCCCCHHHHHHHHc-------------CCeEEEECCCHHHHHHHHHhcC-------------------------
Confidence 47999999999999999873 5689999999999999998761
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
+.+...+...++ .+++||+|++..++++++ +...++++++++|||||++++....
T Consensus 87 ----------------------~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 87 ----------------------RPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp ----------------------SCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----------------------CceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 233445555555 568899999999999887 7889999999999999999997544
No 64
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.62 E-value=1e-15 Score=115.89 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=84.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~-------------~~~~~~~D~s~~~~~~a~~~~~~~~---------------------- 83 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPK-------------FKNTWAVDLSQEMLSEAENKFRSQG---------------------- 83 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGG-------------SSEEEEECSCHHHHHHHHHHHHHTT----------------------
T ss_pred CeEEEeCCCCCHHHHHHHHC-------------CCcEEEEECCHHHHHHHHHHHhhcC----------------------
Confidence 47999999999999998873 4679999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh-ccccc---ccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF-GIRNV---TRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|....+.. ++||+|++.. +++++ .+...++++++++|+|||.+++..
T Consensus 84 --------------------~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 84 --------------------LKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp --------------------CCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --------------------CCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2467777777776655 7899999998 99888 678899999999999999999844
No 65
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=6.9e-16 Score=117.44 Aligned_cols=104 Identities=9% Similarity=0.119 Sum_probs=86.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. .+++++|+|+.+++.++++.. .
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~-------------~~v~gvD~s~~~~~~a~~~~~---~--------------------- 100 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFF-------------PRVIGLDVSKSALEIAAKENT---A--------------------- 100 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHS-------------SCEEEEESCHHHHHHHHHHSC---C---------------------
T ss_pred CeEEEEcCCCCHHHHHHHHhC-------------CCEEEEECCHHHHHHHHHhCc---c---------------------
Confidence 479999999999999998854 379999999999999998762 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-----cchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-----DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~ 153 (167)
.++.+...|..+.+... ..||+|++..++++++ +...++++++++|||||+++
T Consensus 101 --------------------~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 160 (245)
T 3ggd_A 101 --------------------ANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMY 160 (245)
T ss_dssp --------------------TTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEE
T ss_pred --------------------cCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35777777776654321 2389999999999888 78999999999999999999
Q ss_pred EEeecccC
Q psy889 154 CLEFSHVN 161 (167)
Q Consensus 154 ~~~~~~~~ 161 (167)
+.++...+
T Consensus 161 i~~~~~~~ 168 (245)
T 3ggd_A 161 LIELGTGC 168 (245)
T ss_dssp EEEECTTH
T ss_pred EEeCCccc
Confidence 99987654
No 66
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.61 E-value=3.2e-15 Score=111.92 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=77.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++... ++.+++|+|+++.+++.+++++...+.
T Consensus 44 ~vLDiGcG~G~~~~~la~~~-----------p~~~v~gvD~s~~~l~~a~~~~~~~~~---------------------- 90 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQN-----------PDINYIGIDIQKSVLSYALDKVLEVGV---------------------- 90 (214)
T ss_dssp EEEEESCTTSHHHHHHHHHC-----------TTSEEEEEESCHHHHHHHHHHHHHHCC----------------------
T ss_pred eEEEEccCcCHHHHHHHHHC-----------CCCCEEEEEcCHHHHHHHHHHHHHcCC----------------------
Confidence 79999999999999999876 367899999999999999999876654
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCC--CCccchhhHhhhhcccccc--------cHHHHHHHHHHhcCCCcE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--IESDSYSAYTIAFGIRNVT--------RIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~ 151 (167)
.++.+...|...++ +.+++||+|+++....+.. ....+++++.++|+|||.
T Consensus 91 -------------------~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 151 (214)
T 1yzh_A 91 -------------------PNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGE 151 (214)
T ss_dssp -------------------SSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCE
T ss_pred -------------------CCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcE
Confidence 34555555555543 4445666666654322221 235789999999999999
Q ss_pred EEEEe
Q psy889 152 FLCLE 156 (167)
Q Consensus 152 l~~~~ 156 (167)
+++..
T Consensus 152 l~~~~ 156 (214)
T 1yzh_A 152 IHFKT 156 (214)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99854
No 67
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=2.4e-15 Score=116.10 Aligned_cols=112 Identities=16% Similarity=0.046 Sum_probs=90.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH------HHHHHHHHHHhcccCCCCCCccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA------MLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 74 (167)
.+|||+|||+|.++..+++... +..+++++|+|+. +++.+++++...+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g----------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--------------- 99 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVG----------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--------------- 99 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHC----------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT---------------
T ss_pred CEEEEeCCCCCHHHHHHHHHhC----------CCCEEEEEECCccccccHHHHHHHHHHHHhcCC---------------
Confidence 4899999999999999998763 2478999999997 99999998875443
Q ss_pred ccCCCCCCCCceeeeeeccccccCCCCceEEeecc---cCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcE
Q psy889 75 EELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEAN---AEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 75 ~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 151 (167)
..++.+...| ...+++.+++||+|++..+++++++...+++.+.++++|||+
T Consensus 100 -------------------------~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~ 154 (275)
T 3bkx_A 100 -------------------------GDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDH 154 (275)
T ss_dssp -------------------------GGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSE
T ss_pred -------------------------CCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCE
Confidence 1357777776 344556678899999999999999888877777777777999
Q ss_pred EEEEeecccCC
Q psy889 152 FLCLEFSHVNN 162 (167)
Q Consensus 152 l~~~~~~~~~~ 162 (167)
+++.++..+..
T Consensus 155 l~~~~~~~~~~ 165 (275)
T 3bkx_A 155 VDVAEWSMQPT 165 (275)
T ss_dssp EEEEEECSSCS
T ss_pred EEEEEecCCCC
Confidence 99998876543
No 68
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.61 E-value=3.5e-15 Score=118.81 Aligned_cols=107 Identities=14% Similarity=0.053 Sum_probs=89.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 171 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 217 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLTAH-----------EDLSGTVLDL-QGPASAAHRRFLDTGL--------------------- 217 (332)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCChhHHHHHHHHHC-----------CCCeEEEecC-HHHHHHHHHhhhhcCc---------------------
Confidence 479999999999999999987 3778999999 9999999998876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|+. .+.+. .||+|++.+++|++++ ..+++++++++|+|||++++.+..
T Consensus 218 -------------------~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 218 -------------------SGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp -------------------TTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred -------------------CcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 156888888875 23333 7999999999998887 489999999999999999999876
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
.++
T Consensus 277 ~~~ 279 (332)
T 3i53_A 277 AGD 279 (332)
T ss_dssp CC-
T ss_pred CCC
Confidence 554
No 69
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.61 E-value=1.9e-15 Score=113.60 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=73.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|++++...+.
T Consensus 41 ~vLDiGcG~G~~~~~la~~~-----------p~~~v~giD~s~~~l~~a~~~~~~~~~---------------------- 87 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQN-----------PDINYIGIELFKSVIVTAVQKVKDSEA---------------------- 87 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHC-----------TTSEEEEECSCHHHHHHHHHHHHHSCC----------------------
T ss_pred eEEEEecCCCHHHHHHHHHC-----------CCCCEEEEEechHHHHHHHHHHHHcCC----------------------
Confidence 79999999999999999876 378899999999999999999876554
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCC--CCccchhhHhhhhcccccc--------cHHHHHHHHHHhcCCCcE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--IESDSYSAYTIAFGIRNVT--------RIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~~~~~~~~~--------~~~~~l~~~~~~LkpgG~ 151 (167)
.++.+...|...++ +.+++||.|++.....+.. ....++++++++|+|||.
T Consensus 88 -------------------~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~ 148 (213)
T 2fca_A 88 -------------------QNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGS 148 (213)
T ss_dssp -------------------SSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCE
T ss_pred -------------------CCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCE
Confidence 23444444444332 3334455554432211111 136789999999999999
Q ss_pred EEEEe
Q psy889 152 FLCLE 156 (167)
Q Consensus 152 l~~~~ 156 (167)
+++..
T Consensus 149 l~~~t 153 (213)
T 2fca_A 149 IHFKT 153 (213)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99865
No 70
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.61 E-value=3.5e-15 Score=120.44 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=90.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------------- 227 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQYN-----------KEVEVTIVDL-PQQLEMMRKQTAGLSG---------------------- 227 (363)
T ss_dssp EEEEESCTTCHHHHHHHHHS-----------TTCEEEEEEC-HHHHHHHHHHHTTCTT----------------------
T ss_pred EEEEeCCCcCHHHHHHHHhC-----------CCCEEEEEeC-HHHHHHHHHHHHhcCc----------------------
Confidence 79999999999999999987 3789999999 9999999998865443
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|+... +++ +.||+|++..++|++++. .+++++++++|+|||++++.+.
T Consensus 228 ------------------~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 228 ------------------SERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ------------------GGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ------------------ccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 14688888888764 344 679999999999977654 6889999999999999999887
Q ss_pred cccCC
Q psy889 158 SHVNN 162 (167)
Q Consensus 158 ~~~~~ 162 (167)
..++.
T Consensus 289 ~~~~~ 293 (363)
T 3dp7_A 289 LWDRQ 293 (363)
T ss_dssp CTTSC
T ss_pred ccCCc
Confidence 65553
No 71
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.60 E-value=2.5e-15 Score=118.69 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=86.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ...+++++|+|+.+++.++++.........
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~------------------ 85 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKG------------RINKLVCTDIADVSVKQCQQRYEDMKNRRD------------------ 85 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHHHSSSC------------------
T ss_pred CEEEEECCCCcHHHHHHHhc------------CCCEEEEEeCCHHHHHHHHHHHHHhhhccc------------------
Confidence 37999999999999998873 267899999999999999998865321000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC----CC--ccchhhHhhhhccccc----ccHHHHHHHHHHhcCCCc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP----IE--SDSYSAYTIAFGIRNV----TRIDKALSEAYRVLKPGG 150 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~--~~~~D~v~~~~~~~~~----~~~~~~l~~~~~~LkpgG 150 (167)
.....++.+...|....+ +. .++||+|++..++++. ++...++++++++|||||
T Consensus 86 ----------------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 149 (313)
T 3bgv_A 86 ----------------SEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGG 149 (313)
T ss_dssp ----------------C-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred ----------------ccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCc
Confidence 000135677777777654 32 4589999999999887 446799999999999999
Q ss_pred EEEEEeecc
Q psy889 151 RFLCLEFSH 159 (167)
Q Consensus 151 ~l~~~~~~~ 159 (167)
.+++...+.
T Consensus 150 ~li~~~~~~ 158 (313)
T 3bgv_A 150 YFIGTTPNS 158 (313)
T ss_dssp EEEEEEECH
T ss_pred EEEEecCCh
Confidence 999987643
No 72
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=2.6e-15 Score=110.25 Aligned_cols=105 Identities=10% Similarity=-0.012 Sum_probs=84.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++...+.
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 92 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRG------------AASVLFVESDQRSAAVIARNIEALGL--------------------- 92 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CSEEEEEECCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEeCCCcCHHHHHHHHCC------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999877632 45799999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC--CCccchhhHhhhhccccc-ccHHHHHHHHHH--hcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--IESDSYSAYTIAFGIRNV-TRIDKALSEAYR--VLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~~~~~~~~-~~~~~~l~~~~~--~LkpgG~l~~~ 155 (167)
.++.+...|..+.. ....+||+|++...+++. .+...++.++.+ +|+|||.+++.
T Consensus 93 --------------------~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 93 --------------------SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp --------------------SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred --------------------CceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 45777777766542 335789999997766654 678899999999 99999999996
Q ss_pred eec
Q psy889 156 EFS 158 (167)
Q Consensus 156 ~~~ 158 (167)
...
T Consensus 153 ~~~ 155 (189)
T 3p9n_A 153 RAT 155 (189)
T ss_dssp EET
T ss_pred ecC
Confidence 544
No 73
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.60 E-value=2.4e-15 Score=110.84 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=80.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. ...+++++|+++.+++.+++++...+. .
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~----~---------------- 73 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVG----------ENGRVFGFDIQDKAIANTTKKLTDLNL----I---------------- 73 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHC----------TTCEEEEECSCHHHHHHHHHHHHHTTC----G----------------
T ss_pred CEEEEcCCCCCHHHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHHHHHcCC----C----------------
Confidence 4799999999999999999873 256899999999999999999876543 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CCccchhhHhhhhcc---------cccccHHHHHHHHHHhcCCCc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFGI---------RNVTRIDKALSEAYRVLKPGG 150 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~---------~~~~~~~~~l~~~~~~LkpgG 150 (167)
.++.+...|...++ ..+++||+|++...+ ....+...++++++++|||||
T Consensus 74 --------------------~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG 133 (197)
T 3eey_A 74 --------------------DRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGG 133 (197)
T ss_dssp --------------------GGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEE
T ss_pred --------------------CCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCC
Confidence 24555565554443 334567777665432 112245678999999999999
Q ss_pred EEEEEeec
Q psy889 151 RFLCLEFS 158 (167)
Q Consensus 151 ~l~~~~~~ 158 (167)
++++..+.
T Consensus 134 ~l~~~~~~ 141 (197)
T 3eey_A 134 IITVVIYY 141 (197)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 99998754
No 74
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.60 E-value=2.8e-15 Score=117.60 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=86.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+..
T Consensus 85 ~vLDlGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~--------------------- 130 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL-------------GWEVTALELSTSVLAAFRKRLAEAPAD--------------------- 130 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT-------------TCCEEEEESCHHHHHHHHHHHHTSCHH---------------------
T ss_pred cEEEEeccCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHhhcccc---------------------
Confidence 7999999999999999873 568999999999999999988654310
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh-hcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA-FGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
...++.+...|..+++. +++||+|++. .++++.+ +...++++++++|||||+|++..++
T Consensus 131 -----------------~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 131 -----------------VRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp -----------------HHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------cccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 00357888888888776 6889988864 5556655 4689999999999999999998776
Q ss_pred cc
Q psy889 159 HV 160 (167)
Q Consensus 159 ~~ 160 (167)
..
T Consensus 193 ~~ 194 (299)
T 3g2m_A 193 SE 194 (299)
T ss_dssp CH
T ss_pred Cc
Confidence 54
No 75
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.60 E-value=1.2e-15 Score=115.27 Aligned_cols=103 Identities=14% Similarity=-0.023 Sum_probs=78.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.. +...++|+|+|+.+++.+++++...+.
T Consensus 37 ~vLDiGcG~G~~~~~lA~~~-----------p~~~v~giD~s~~~l~~a~~~~~~~~l---------------------- 83 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAKDR-----------PEQDFLGIEVHSPGVGACLASAHEEGL---------------------- 83 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHC-----------TTSEEEEECSCHHHHHHHHHHHHHTTC----------------------
T ss_pred eEEEEeeeChHHHHHHHHHC-----------CCCeEEEEEecHHHHHHHHHHHHHhCC----------------------
Confidence 79999999999999999876 367899999999999999999876654
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCC-C--CCccchhhHhhhhcccccc--cH------HHHHHHHHHhcCCCc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P--IESDSYSAYTIAFGIRNVT--RI------DKALSEAYRVLKPGG 150 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~~D~v~~~~~~~~~~--~~------~~~l~~~~~~LkpgG 150 (167)
.++.+...|...+ + +.+++||.|++.+...+.. .. ..++++++++|||||
T Consensus 84 -------------------~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG 144 (218)
T 3dxy_A 84 -------------------SNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGG 144 (218)
T ss_dssp -------------------SSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEE
T ss_pred -------------------CcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCc
Confidence 3566666665542 2 4556677776653322221 11 258999999999999
Q ss_pred EEEEEe
Q psy889 151 RFLCLE 156 (167)
Q Consensus 151 ~l~~~~ 156 (167)
.|++.+
T Consensus 145 ~l~i~t 150 (218)
T 3dxy_A 145 VFHMAT 150 (218)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999865
No 76
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.59 E-value=2.1e-15 Score=109.00 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=81.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ++.+++++|+++.+++.+++++...+.
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~-----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 74 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRST-----------PQTTAVCFEISEERRERILSNAINLGV--------------------- 74 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTS-----------SSEEEEEECSCHHHHHHHHHHHHTTTC---------------------
T ss_pred CeEEEeCCCCCHHHHHHHHHC-----------CCCeEEEEeCCHHHHHHHHHHHHHhCC---------------------
Confidence 379999999999999998876 368899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++ +...+... ++...++||+|++...+++ ..++++++++|+|||++++.++..
T Consensus 75 -------------------~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 75 -------------------SDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp -------------------TTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred -------------------CCCE-EEecchHhhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 1255 55555533 3332378999999877765 778999999999999999977654
No 77
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.59 E-value=6e-15 Score=115.07 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=84.0
Q ss_pred eEEeeecCC---CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC
Q psy889 2 YILFYLVFP---GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 2 ~vLD~g~G~---G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 78 (167)
+|||+|||+ |.++..+.+.. ++.+++++|+|+.|++.+++++...
T Consensus 80 ~vLDlGcG~pt~G~~~~~~~~~~-----------p~~~v~~vD~sp~~l~~Ar~~~~~~--------------------- 127 (274)
T 2qe6_A 80 QFLDLGSGLPTVQNTHEVAQSVN-----------PDARVVYVDIDPMVLTHGRALLAKD--------------------- 127 (274)
T ss_dssp EEEEETCCSCCSSCHHHHHHHHC-----------TTCEEEEEESSHHHHHHHHHHHTTC---------------------
T ss_pred EEEEECCCCCCCChHHHHHHHhC-----------CCCEEEEEECChHHHHHHHHhcCCC---------------------
Confidence 799999999 99887766654 3789999999999999999887421
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCC-----------CCccchhhHhhhhccccccc--HHHHHHHHHHh
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-----------IESDSYSAYTIAFGIRNVTR--IDKALSEAYRV 145 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~ 145 (167)
.++.++.+|+.+.. +...+||+|++..++|++++ ...+|++++++
T Consensus 128 ----------------------~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~ 185 (274)
T 2qe6_A 128 ----------------------PNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDA 185 (274)
T ss_dssp ----------------------TTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHH
T ss_pred ----------------------CCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHh
Confidence 34666666664421 22247899999999999887 89999999999
Q ss_pred cCCCcEEEEEeecc
Q psy889 146 LKPGGRFLCLEFSH 159 (167)
Q Consensus 146 LkpgG~l~~~~~~~ 159 (167)
|+|||+|++.++..
T Consensus 186 L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 186 LAPGSYLFMTSLVD 199 (274)
T ss_dssp SCTTCEEEEEEEBC
T ss_pred CCCCcEEEEEEecC
Confidence 99999999988875
No 78
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=6.1e-16 Score=118.03 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=77.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
||||+|||+|..+..++++. ..+++++|+|+.+++.|+++....+
T Consensus 63 rVLdiG~G~G~~~~~~~~~~------------~~~v~~id~~~~~~~~a~~~~~~~~----------------------- 107 (236)
T 3orh_A 63 RVLEVGFGMAIAASKVQEAP------------IDEHWIIECNDGVFQRLRDWAPRQT----------------------- 107 (236)
T ss_dssp EEEEECCTTSHHHHHHTTSC------------EEEEEEEECCHHHHHHHHHHGGGCS-----------------------
T ss_pred eEEEECCCccHHHHHHHHhC------------CcEEEEEeCCHHHHHHHHHHHhhCC-----------------------
Confidence 89999999999999887753 4679999999999999999876543
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHh-----hhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYT-----IAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~-----~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.++.+...+...+ .+.+++||.|+ +....++..+...++++++|+|||||+|++
T Consensus 108 -------------------~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 108 -------------------HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -------------------SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -------------------CceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 2455555554332 34455566664 455666788899999999999999999987
Q ss_pred Ee
Q psy889 155 LE 156 (167)
Q Consensus 155 ~~ 156 (167)
.+
T Consensus 169 ~~ 170 (236)
T 3orh_A 169 CN 170 (236)
T ss_dssp CC
T ss_pred Ee
Confidence 54
No 79
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.59 E-value=3e-15 Score=113.02 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=82.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++.
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~-------------~~v~~~D~s~~~~~~a~~~~-------------------------- 82 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEF-------------GDTAGLELSEDMLTHARKRL-------------------------- 82 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHH-------------SEEEEEESCHHHHHHHHHHC--------------------------
T ss_pred CeEEEecccCCHHHHHHHHhC-------------CcEEEEeCCHHHHHHHHHhC--------------------------
Confidence 479999999999999998865 37999999999999998764
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh-hccccc---ccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA-FGIRNV---TRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|....+. ..+||+|+|. .+++++ .+...++++++++|+|||.+++.+
T Consensus 83 --------------------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 83 --------------------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp --------------------TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred --------------------CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 245667777777665 6789999964 477777 456899999999999999999977
Q ss_pred ecccC
Q psy889 157 FSHVN 161 (167)
Q Consensus 157 ~~~~~ 161 (167)
+..++
T Consensus 142 ~~~~~ 146 (239)
T 3bxo_A 142 WWFPE 146 (239)
T ss_dssp CCCTT
T ss_pred ccCcc
Confidence 66544
No 80
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=8e-16 Score=118.94 Aligned_cols=134 Identities=13% Similarity=0.015 Sum_probs=80.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..++... ..+++|+|+|+.|++.++++++.....--.++.+.+++ +.+.-
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~------------~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~-~~~~~--- 120 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDS------------FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFAC-ELEGN--- 120 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGT------------EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHH-HHTTC---
T ss_pred ceEEEeCCCccHHHHHHHHhh------------hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHH-hcCCC---
Confidence 379999999998876655421 24699999999999999988754211000000000000 00000
Q ss_pred CCCCceeeeeeccccccCCCCceE-EeecccCCC-CC---CccchhhHhhhhccccc----ccHHHHHHHHHHhcCCCcE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLR-FLEANAEEL-PI---ESDSYSAYTIAFGIRNV----TRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~-~~~~d~~~~-~~---~~~~~D~v~~~~~~~~~----~~~~~~l~~~~~~LkpgG~ 151 (167)
. . ..+.... ....++. +...|.... +. ..++||+|+++.+++++ ++...++++++++|||||+
T Consensus 121 ~---~--~~~~~~~---~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~ 192 (263)
T 2a14_A 121 S---G--RWEEKEE---KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGH 192 (263)
T ss_dssp G---G--GHHHHHH---HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred C---c--chhhHHH---HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 0 0 0000000 0001232 666666552 32 35689999999998875 5667899999999999999
Q ss_pred EEEEeec
Q psy889 152 FLCLEFS 158 (167)
Q Consensus 152 l~~~~~~ 158 (167)
|++.+..
T Consensus 193 li~~~~~ 199 (263)
T 2a14_A 193 LVTTVTL 199 (263)
T ss_dssp EEEEEES
T ss_pred EEEEEee
Confidence 9998754
No 81
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.58 E-value=3.4e-15 Score=118.51 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=91.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. ++.+++++|++ .+++.++++....+.
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~~-~~~~~a~~~~~~~~~--------------------- 213 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHN-----------PNAEIFGVDWA-SVLEVAKENARIQGV--------------------- 213 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-----------TTCEEEEEECH-HHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEECCCcCHHHHHHHHHC-----------CCCeEEEEecH-HHHHHHHHHHHhcCC---------------------
Confidence 379999999999999999877 36799999999 999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+.+...+ ||+|++.+++++++ +...++++++++|+|||++++.++.
T Consensus 214 -------------------~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 214 -------------------ASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp -------------------GGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -------------------CcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 1358888888876555433 99999999999884 4579999999999999999999987
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 274 ~~~~ 277 (335)
T 2r3s_A 274 PNSD 277 (335)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 6653
No 82
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=2.3e-15 Score=114.76 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=82.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++... ++.+++++|+|+.+++.++++....+.
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 119 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICF-----------PHLHVTIVDSLNKRITFLEKLSEALQL--------------------- 119 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHC-----------TTCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEecCCCCHHHHHHHHhC-----------CCCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999998754 378899999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCC---ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIE---SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...+.++++.. .++||+|++.. +.+...++++++++|+|||++++..
T Consensus 120 --------------------~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 120 --------------------ENTTFCHDRAETFGQRKDVRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp --------------------SSEEEEESCHHHHTTCTTTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------CCEEEEeccHHHhcccccccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 3577777777665532 56799998854 5678899999999999999999864
No 83
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.58 E-value=1.1e-14 Score=117.82 Aligned_cols=108 Identities=13% Similarity=0.046 Sum_probs=91.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 204 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~l--------------------- 250 (369)
T 3gwz_A 204 ATAVDIGGGRGSLMAAVLDAF-----------PGLRGTLLER-PPVAEEARELLTGRGL--------------------- 250 (369)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------
T ss_pred cEEEEeCCCccHHHHHHHHHC-----------CCCeEEEEcC-HHHHHHHHHhhhhcCc---------------------
Confidence 379999999999999999987 3788999999 9999999998876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|+. .+.+. .||+|++.++++++++.. ++++++++.|+|||++++.+..
T Consensus 251 -------------------~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 251 -------------------ADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp -------------------TTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred -------------------CCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 156888888876 33333 799999999999888765 7999999999999999999987
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 310 ~~~~ 313 (369)
T 3gwz_A 310 IDER 313 (369)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 6653
No 84
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.58 E-value=1.1e-14 Score=117.03 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=91.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 238 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHF-----------PELDSTILNL-PGAIDLVNENAAEKGV--------------------- 238 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHC-----------TTCEEEEEEC-GGGHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCcccHHHHHHHHHC-----------CCCeEEEEec-HHHHHHHHHHHHhcCC---------------------
Confidence 379999999999999999987 3678999999 9999999999876544
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+.+.+. +|+|++..+++++++ ..+++++++++|+|||++++.++.
T Consensus 239 -------------------~~~v~~~~~d~~~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 239 -------------------ADRMRGIAVDIYKESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp -------------------TTTEEEEECCTTTSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred -------------------CCCEEEEeCccccCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 145888888887765543 399999999998877 789999999999999999998977
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
.++
T Consensus 298 ~~~ 300 (359)
T 1x19_A 298 IDD 300 (359)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 85
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.58 E-value=1.1e-14 Score=108.64 Aligned_cols=100 Identities=12% Similarity=0.063 Sum_probs=79.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++++..+.
T Consensus 57 ~~vLDlGcG~G~~~~~la~~-------------~~~v~~vD~s~~~~~~a~~~~~~~g~--------------------- 102 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLA-------------GGRAITIEPRADRIENIQKNIDTYGL--------------------- 102 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCCCHHHHHHHHc-------------CCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999999883 57899999999999999999877665
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+.......||+|++...+ +.. ++++++++|||||++++....
T Consensus 103 -------------------~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 103 -------------------SPRMRAVQGTAPAALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp -------------------TTTEEEEESCTTGGGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred -------------------CCCEEEEeCchhhhcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 126777777776633233569999876532 455 999999999999999986654
No 86
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.57 E-value=3.9e-15 Score=114.57 Aligned_cols=99 Identities=26% Similarity=0.292 Sum_probs=81.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++..
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~------------------------- 97 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQER-------------GFEVVLVDPSKEMLEVAREKGV------------------------- 97 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTT-------------TCEEEEEESCHHHHHHHHHHTC-------------------------
T ss_pred CeEEEeCCCcCHHHHHHHHc-------------CCeEEEEeCCHHHHHHHHhhcC-------------------------
Confidence 47999999999999998873 5689999999999999987642
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc-ccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR-NVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
. .+...|...+++.+++||+|++..++. ..++...++++++++|||||.+++...+.
T Consensus 98 --------------------~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 98 --------------------K--NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --------------------S--CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --------------------C--CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 1 155667777777778899999876554 44779999999999999999999977653
No 87
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=8e-15 Score=106.85 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=85.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+.
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~-------------~~~v~~~D~~~~~~~~a~~~~~~~~~--------------------- 99 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADE-------------VKSTTMADINRRAIKLAKENIKLNNL--------------------- 99 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CeEEEeCCCCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999998874 46899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCC--ceEEeecccCCCCCCccchhhHhhhhcccc-cccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNP--RLRFLEANAEELPIESDSYSAYTIAFGIRN-VTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
. ++.+...|..+. ...+.||+|++...+++ ......++++++++|+|||.+++.+.
T Consensus 100 --------------------~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 100 --------------------DNYDIRVVHSDLYEN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp --------------------TTSCEEEEECSTTTT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------------CccceEEEECchhcc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3 377777777653 33568999999877765 46678999999999999999999876
Q ss_pred cc
Q psy889 158 SH 159 (167)
Q Consensus 158 ~~ 159 (167)
..
T Consensus 159 ~~ 160 (194)
T 1dus_A 159 TK 160 (194)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 88
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.57 E-value=2.2e-15 Score=112.60 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=78.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++ .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~----~---------------------- 94 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-------------GIEAVGVDGDRTLVDAARAA----G---------------------- 94 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-------------TCEEEEEESCHHHHHHHHHT----C----------------------
T ss_pred CEEEEeCCCCCHHHHHHHHC-------------CCEEEEEcCCHHHHHHHHHh----c----------------------
Confidence 47999999999999998873 56899999999999999876 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC---CCC-ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL---PIE-SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~-~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
+..+...+...+ +.. ..+||+|++..+++ ..+...++++++++|+|||++++.+
T Consensus 95 ---------------------~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 95 ---------------------AGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp ---------------------SSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------------------ccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 123333333322 333 34599999999988 8889999999999999999999988
Q ss_pred eccc
Q psy889 157 FSHV 160 (167)
Q Consensus 157 ~~~~ 160 (167)
.+..
T Consensus 153 ~~~~ 156 (227)
T 3e8s_A 153 LHPW 156 (227)
T ss_dssp CCTT
T ss_pred cCcc
Confidence 6543
No 89
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.57 E-value=2.4e-15 Score=117.46 Aligned_cols=130 Identities=14% Similarity=0.101 Sum_probs=79.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCC----Cccccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPN----PRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~d~~~ 76 (167)
.+|||+|||+|..+..++. . .+.+++|+|+|+.|++.+++++...... ... .++.+..+....
T Consensus 73 ~~vLDiGcG~G~~~~l~~~-~-----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 139 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSAC-S-----------HFEDITMTDFLEVNRQELGRWLQEEPGA-FNWSMYSQHACLIEGKGEC 139 (289)
T ss_dssp SEEEEETCTTCCGGGTTGG-G-----------GCSEEEEECSCHHHHHHHHHHHTTCTTC-CCCHHHHHHHHHHHCSCCC
T ss_pred CeEEEECCCcChHHHHhhc-c-----------CCCeEEEeCCCHHHHHHHHHHHhhCccc-ccchhhhhHHHHhcCcccc
Confidence 4799999999995443333 2 2568999999999999999876432100 000 000011100000
Q ss_pred CCCCCCCCceeeeeeccccccCCCCceEEeecccCC-CC-----CCccchhhHhhhhcccc----cccHHHHHHHHHHhc
Q psy889 77 LPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LP-----IESDSYSAYTIAFGIRN----VTRIDKALSEAYRVL 146 (167)
Q Consensus 77 l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-----~~~~~~D~v~~~~~~~~----~~~~~~~l~~~~~~L 146 (167)
+. ...... ......+...|+.. .+ +.+++||+|+++.++++ +++...+|++++++|
T Consensus 140 -------~~--~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~L 205 (289)
T 2g72_A 140 -------WQ--DKERQL-----RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLL 205 (289)
T ss_dssp -------HH--HHHHHH-----HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE
T ss_pred -------hh--hhHHHH-----HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhc
Confidence 00 000000 00013455556655 43 33466999999999998 678899999999999
Q ss_pred CCCcEEEEEee
Q psy889 147 KPGGRFLCLEF 157 (167)
Q Consensus 147 kpgG~l~~~~~ 157 (167)
||||+|++.+.
T Consensus 206 kpGG~l~~~~~ 216 (289)
T 2g72_A 206 RPGGHLLLIGA 216 (289)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999753
No 90
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.56 E-value=8.5e-15 Score=116.47 Aligned_cols=107 Identities=12% Similarity=0.137 Sum_probs=89.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 215 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-----------PSARGVMLDR-EGSLGVARDNLSSLLA--------------------- 215 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-----------TTCEEEEEEC-TTCTHHHHHHTHHHHH---------------------
T ss_pred CEEEEeCCCchHHHHHHHHHC-----------CCCEEEEeCc-HHHHHHHHHHHhhcCC---------------------
Confidence 379999999999999999887 3678999999 9999999998765443
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|... +.+ ..||+|++..++|++++.. +++++++++|+|||++++.+..
T Consensus 216 -------------------~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 216 -------------------GERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp -------------------TTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred -------------------CCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 1468888888766 333 5799999999999777654 9999999999999999999876
Q ss_pred ccC
Q psy889 159 HVN 161 (167)
Q Consensus 159 ~~~ 161 (167)
.++
T Consensus 275 ~~~ 277 (334)
T 2ip2_A 275 ISA 277 (334)
T ss_dssp BCS
T ss_pred cCC
Confidence 554
No 91
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=8.2e-15 Score=110.87 Aligned_cols=99 Identities=20% Similarity=0.286 Sum_probs=81.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ . .+++++|+|+.+++.++++....+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~-------------~-~~v~~vD~s~~~~~~a~~~~~~~~---------------------- 78 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLAD-------------H-YEVTGVDLSEEMLEIAQEKAMETN---------------------- 78 (243)
T ss_dssp CEEEEESCTTCHHHHHHTT-------------T-SEEEEEESCHHHHHHHHHHHHHTT----------------------
T ss_pred CeEEEecCCCCHHHHHHhh-------------C-CeEEEEECCHHHHHHHHHhhhhcC----------------------
Confidence 4799999999999988876 3 579999999999999999876433
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh-ccccc---ccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF-GIRNV---TRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|..+.+.. .+||+|++.. +++++ .+...++++++++|+|||.+++..
T Consensus 79 --------------------~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 79 --------------------RHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp --------------------CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------CceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 2467777777766654 7899999875 77776 567889999999999999999843
No 92
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.56 E-value=9.2e-15 Score=117.06 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=91.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+ +..+++++|+ +.+++.++++....+.
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 227 (352)
T 3mcz_A 181 RTVIDLAGGHGTYLAQVLRRH-----------PQLTGQIWDL-PTTRDAARKTIHAHDL--------------------- 227 (352)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-----------TTCEEEEEEC-GGGHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCcCHHHHHHHHhC-----------CCCeEEEEEC-HHHHHHHHHHHHhcCC---------------------
Confidence 379999999999999999987 3788999999 8899999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|+...+ .....||+|++..++|++++. .+++++++++|+|||++++.+.
T Consensus 228 -------------------~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 228 -------------------GGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp -------------------GGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -------------------CCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 146888888877654 134569999999999988764 8999999999999999999987
Q ss_pred cccCC
Q psy889 158 SHVNN 162 (167)
Q Consensus 158 ~~~~~ 162 (167)
..++.
T Consensus 289 ~~~~~ 293 (352)
T 3mcz_A 289 TMNDD 293 (352)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 66553
No 93
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=1.6e-14 Score=105.36 Aligned_cols=99 Identities=17% Similarity=0.084 Sum_probs=81.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~~D~~~~~~~~a~~~~~------------------------- 89 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQ-------------GHDVLGTDLDPILIDYAKQDFP------------------------- 89 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHCT-------------------------
T ss_pred CeEEEECCCCCHHHHHHHHC-------------CCcEEEEcCCHHHHHHHHHhCC-------------------------
Confidence 47999999999999999873 5689999999999999997642
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh-hccccc--ccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA-FGIRNV--TRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
++.+...|....+..+++||+|++. .++++. ++...++++++++|+|||.+++...
T Consensus 90 ---------------------~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 90 ---------------------EARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp ---------------------TSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------------------CCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 3566677777666667789999987 566666 4568999999999999999998664
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
.
T Consensus 149 ~ 149 (195)
T 3cgg_A 149 A 149 (195)
T ss_dssp T
T ss_pred C
Confidence 4
No 94
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.55 E-value=1.6e-14 Score=116.43 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=86.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 184 ~~vlDvG~G~G~~~~~l~~~~-----------~~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 230 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIALRA-----------PHLRGTLVEL-AGPAERARRRFADAGL--------------------- 230 (374)
T ss_dssp CEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCCcCHHHHHHHHHC-----------CCCEEEEEeC-HHHHHHHHHHHHhcCC---------------------
Confidence 479999999999999999877 3678999999 9999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|+.+ +.+ ..||+|++..+++++++. ..++++++++|+|||++++.++
T Consensus 231 -------------------~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 231 -------------------ADRVTVAEGDFFK-PLP-VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -------------------TTTEEEEECCTTS-CCS-CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -------------------CCceEEEeCCCCC-cCC-CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 1368888888754 222 239999999999988776 4899999999999999999887
No 95
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.54 E-value=4e-15 Score=113.98 Aligned_cols=133 Identities=11% Similarity=0.021 Sum_probs=83.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++... ..+++++|+|+.+++.+++++......-.-.+..++.+ +.+.. .
T Consensus 59 ~vLDlGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~---~ 122 (265)
T 2i62_A 59 LLIDIGSGPTIYQLLSACES------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVC-DLEGN---R 122 (265)
T ss_dssp EEEEESCTTCCGGGTTGGGT------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHH-HHTTT---C
T ss_pred EEEEECCCccHHHHHHhhcc------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhh-ccccc---c
Confidence 79999999999988887633 23899999999999999988753210000000000000 00000 0
Q ss_pred CCCceeeeeeccccccCCCCce-EEeecccCCCC-CCc---cchhhHhhhhccc----ccccHHHHHHHHHHhcCCCcEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRL-RFLEANAEELP-IES---DSYSAYTIAFGIR----NVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~-~~~---~~~D~v~~~~~~~----~~~~~~~~l~~~~~~LkpgG~l 152 (167)
.... ..... ...++ .+...|..... ..+ ++||+|++..+++ +.++...++++++++|||||+|
T Consensus 123 ~~~~--~~~~~------l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l 194 (265)
T 2i62_A 123 MKGP--EKEEK------LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFL 194 (265)
T ss_dssp SCHH--HHHHH------HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred cchH--HHHHH------hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEE
Confidence 0000 00000 00125 67777776643 244 7899999999888 6668899999999999999999
Q ss_pred EEEeec
Q psy889 153 LCLEFS 158 (167)
Q Consensus 153 ~~~~~~ 158 (167)
++.+..
T Consensus 195 i~~~~~ 200 (265)
T 2i62_A 195 VMVDAL 200 (265)
T ss_dssp EEEEES
T ss_pred EEEecC
Confidence 997743
No 96
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.54 E-value=7.6e-15 Score=113.02 Aligned_cols=100 Identities=17% Similarity=0.070 Sum_probs=83.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++... +..+++++|+|+.+++.++++....+.
T Consensus 82 ~~vLDiG~G~G~~~i~la~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~~l--------------------- 129 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPLKIVR-----------PELELVLVDATRKKVAFVERAIEVLGL--------------------- 129 (249)
T ss_dssp CEEEEETCTTTTTHHHHHHHC-----------TTCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEEcCCCCHHHHHHHHHC-----------CCCEEEEEECCHHHHHHHHHHHHHhCC---------------------
Confidence 379999999999999998876 378999999999999999999987765
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCC---ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIE---SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...+.++++.. ..+||+|++.. +.+...++..++++|||||++++..
T Consensus 130 --------------------~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 130 --------------------KGARALWGRAEVLAREAGHREAYARAVARA----VAPLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp --------------------SSEEEEECCHHHHTTSTTTTTCEEEEEEES----SCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------CceEEEECcHHHhhcccccCCCceEEEECC----cCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 4577778877665532 46899998854 5677889999999999999999865
No 97
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.54 E-value=1.2e-14 Score=111.06 Aligned_cols=108 Identities=18% Similarity=0.107 Sum_probs=75.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhccc-CCCCCCcccccccccccCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK-VPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~ 80 (167)
+|||+|||+|.++..+++.. +...++|+|+|+.+++.|++++..... .....
T Consensus 49 ~vLDiGcG~G~~~~~la~~~-----------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~---------------- 101 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPLF-----------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF---------------- 101 (235)
T ss_dssp EEEEETCTTCHHHHHHGGGS-----------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC----------------
T ss_pred eEEEEccCCcHHHHHHHHHC-----------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC----------------
Confidence 69999999999999999876 367899999999999999988753210 00000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CC--CCccchhhHhhhhccccccc--------HHHHHHHHHHhcCCC
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LP--IESDSYSAYTIAFGIRNVTR--------IDKALSEAYRVLKPG 149 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~--~~~~~~D~v~~~~~~~~~~~--------~~~~l~~~~~~Lkpg 149 (167)
.++.++..|... ++ +.+++||.|++.+.-.+... ...+++++.++||||
T Consensus 102 --------------------~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG 161 (235)
T 3ckk_A 102 --------------------QNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVG 161 (235)
T ss_dssp --------------------TTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEE
T ss_pred --------------------CeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCC
Confidence 356666666654 33 45567777765432222110 146899999999999
Q ss_pred cEEEEEe
Q psy889 150 GRFLCLE 156 (167)
Q Consensus 150 G~l~~~~ 156 (167)
|.|++..
T Consensus 162 G~l~~~t 168 (235)
T 3ckk_A 162 GLVYTIT 168 (235)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9999864
No 98
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=1.7e-14 Score=106.92 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=82.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ++.+++++|+|+.+++.++++....+.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 114 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-----------PEAHFTLLDSLGKRVRFLRQVQHELKL--------------------- 114 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-----------TTSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CeEEEECCCCCHHHHHHHHHC-----------CCCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999999876 367899999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|....+ ..++||+|++.. +.+...++++++++|+|||.+++..
T Consensus 115 --------------------~~v~~~~~d~~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 115 --------------------ENIEPVQSRVEEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp --------------------SSEEEEECCTTTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred --------------------CCeEEEecchhhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 34777788777654 346799998743 4667899999999999999999864
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.54 E-value=2.4e-14 Score=107.53 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=71.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++..+ ..+++|+|+|+.+++.+.+..+..
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~-----------~~~V~gvD~s~~~l~~~~~~a~~~----------------------- 104 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD-----------EGIIYAVEYSAKPFEKLLELVRER----------------------- 104 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT-----------TSEEEEECCCHHHHHHHHHHHHHC-----------------------
T ss_pred CEEEEECCcCCHHHHHHHHHcC-----------CCEEEEEECCHHHHHHHHHHHhcC-----------------------
Confidence 4799999999999999998763 468999999999987766655432
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC----CCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL----PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|.... +.. ++||+|++.. ........++++++++|||||+|++..
T Consensus 105 --------------------~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~--~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 105 --------------------NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI--AQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp --------------------SSEEEECSCTTCGGGTTTTC-CCEEEEEECC--CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------CCeEEEEcCCCCchhhcccc-cceeEEEEec--cChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 2345555555442 233 6799998762 112234456899999999999999963
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.54 E-value=1.6e-14 Score=112.03 Aligned_cols=100 Identities=15% Similarity=0.027 Sum_probs=75.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ .+.+++++|+|+.|++.++++.....
T Consensus 47 ~~VLDlGcGtG~~a~~La~-------------~g~~V~gvD~S~~ml~~Ar~~~~~~~---------------------- 91 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALE-------------RGASVTVFDFSQRMCDDLAEALADRC---------------------- 91 (261)
T ss_dssp CEEEEECTTCHHHHHHHHH-------------TTCEEEEEESCHHHHHHHHHHTSSSC----------------------
T ss_pred CEEEEEeCcchHHHHHHHh-------------cCCEEEEEECCHHHHHHHHHHHHhcc----------------------
Confidence 4899999999999999987 36789999999999999998864321
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
....+...+.+......++||+|++..+++++. +...++.+++++| |||.+++..
T Consensus 92 --------------------v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 92 --------------------VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp --------------------CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred --------------------ceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 122332222210111246799999998888763 5678999999999 999999864
No 101
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.54 E-value=1.7e-15 Score=112.11 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=84.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..++... +..+|+++|+|+.|++.+++++...+.
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~-----------p~a~~~A~Di~~~~leiar~~~~~~g~--------------------- 98 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNEN-----------EKIIYHAYDIDRAEIAFLSSIIGKLKT--------------------- 98 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSS-----------CCCEEEEECSCHHHHHHHHHHHHHSCC---------------------
T ss_pred CeEEEecCCCCHHHHHHHhcC-----------CCCEEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 489999999999999998765 367999999999999999999987665
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..++.+ .|.... ...+.||+|+...++|.+.+.+.++.++++.|+|||.++..+
T Consensus 99 -------------------~~~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 99 -------------------TIKYRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -------------------SSEEEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred -------------------CccEEE--eccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 124555 333222 345779999999999999888888889999999999998755
No 102
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.53 E-value=8.3e-15 Score=110.25 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=84.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. ++.+++++|+++.+++.+++++...+.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 108 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQ----------PGARLLTMEINPDCAAITQQMLNFAGL--------------------- 108 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEECCCCCHHHHHHHHhCC----------CCCEEEEEeCChHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999998763 378999999999999999999887654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCC-----ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIE-----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~-----~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...|..+ ++.. .++||+|++....++.......+..+ ++|+|||++++
T Consensus 109 -------------------~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 109 -------------------QDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp -------------------GGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred -------------------CCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 1346777766533 2211 26799998877666666666777777 99999999998
Q ss_pred Eeeccc
Q psy889 155 LEFSHV 160 (167)
Q Consensus 155 ~~~~~~ 160 (167)
.+...+
T Consensus 169 ~~~~~~ 174 (221)
T 3u81_A 169 DNVIVP 174 (221)
T ss_dssp SCCCCC
T ss_pred eCCCCc
Confidence 665543
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.53 E-value=1.4e-14 Score=107.82 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=81.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++...+.
T Consensus 79 ~~vLdiG~G~G~~~~~la~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 124 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHL-------------VQHVCSVERIKGLQWQARRRLKNLDL--------------------- 124 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEcCCCCHHHHHHHHh-------------CCEEEEEecCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999999874 46899999999999999999887665
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.++.+...|..+.....++||+|++..+++++++ +++++|+|||++++..-
T Consensus 125 --------------------~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 125 --------------------HNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp --------------------CSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEEC
T ss_pred --------------------CceEEEECCcccCCccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEc
Confidence 4677888887765555678999999888877764 58999999999998553
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.53 E-value=1.1e-14 Score=119.04 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=87.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh-------cccCCCCCCcccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD-------LFKVPVPNPRLRFLEAN 73 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~-------~~~~~~~~~~~~~~~~d 73 (167)
.+|||+|||+|.+++.++...+ ..+++|+|+++.+++.|+++.+. .+.
T Consensus 175 d~VLDLGCGtG~l~l~lA~~~g-----------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-------------- 229 (438)
T 3uwp_A 175 DLFVDLGSGVGQVVLQVAAATN-----------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-------------- 229 (438)
T ss_dssp CEEEEESCTTSHHHHHHHHHCC-----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB--------------
T ss_pred CEEEEeCCCCCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC--------------
Confidence 4799999999999999987652 34599999999999999876532 111
Q ss_pred cccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCc--cchhhHhhhhcccccccHHHHHHHHHHhcCCCcE
Q psy889 74 AEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 74 ~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 151 (167)
...++.++.+|+.+.++.+ ..+|+|+++..+ +.++....|.+++++|||||+
T Consensus 230 -------------------------~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGr 283 (438)
T 3uwp_A 230 -------------------------KHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGR 283 (438)
T ss_dssp -------------------------CCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCE
T ss_pred -------------------------CCCCeEEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcE
Confidence 0146888888887776543 468999887654 357889999999999999999
Q ss_pred EEEEeecccCCc
Q psy889 152 FLCLEFSHVNNS 163 (167)
Q Consensus 152 l~~~~~~~~~~~ 163 (167)
|++++.-.+.+.
T Consensus 284 IVssE~f~p~d~ 295 (438)
T 3uwp_A 284 IVSSKPFAPLNF 295 (438)
T ss_dssp EEESSCSSCTTC
T ss_pred EEEeecccCCCC
Confidence 999877766543
No 105
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.52 E-value=3e-14 Score=115.98 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=84.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.+++++...+.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~-------------g~~V~gvDis~~al~~A~~n~~~~~~--------------------- 280 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARM-------------GAEVVGVEDDLASVLSLQKGLEANAL--------------------- 280 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHT-------------TCEEEEEESBHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeeeCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 37999999999999999883 56899999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccc-----cccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRN-----VTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.+.+...|..+....+++||+|+++..+++ ......++++++++|+|||.++++
T Consensus 281 ---------------------~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 281 ---------------------KAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp ---------------------CCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------CeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 366777777776555678999999877775 456789999999999999999996
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 340 ~ 340 (381)
T 3dmg_A 340 S 340 (381)
T ss_dssp E
T ss_pred E
Confidence 5
No 106
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.52 E-value=2.3e-14 Score=125.25 Aligned_cols=113 Identities=9% Similarity=0.010 Sum_probs=89.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... +..+++|+|+|+.+++.|++++.....-.
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~----------p~a~VtGVDIS~emLe~AReRLa~~lnAk------------------- 773 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPT----------SLQTIIGVDISPKGLARAAKMLHVKLNKE------------------- 773 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCC----------CCCEEEEEESCHHHHHHHHHHHHHHTTTT-------------------
T ss_pred CEEEEECCCCCHHHHHHHHhCC----------CCCeEEEEECCHHHHHHHHHHhhhccchh-------------------
Confidence 4799999999999999988542 24789999999999999998775432100
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.....++.+..+|+..++..++.||+|++..+++++++.. .++++++++|||| .+++.+.+
T Consensus 774 ----------------r~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 774 ----------------ACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp ----------------CSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred ----------------hcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 0000468888999988888889999999999999998754 6899999999999 77776654
Q ss_pred c
Q psy889 159 H 159 (167)
Q Consensus 159 ~ 159 (167)
.
T Consensus 837 ~ 837 (950)
T 3htx_A 837 Y 837 (950)
T ss_dssp G
T ss_pred c
Confidence 4
No 107
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=4.5e-14 Score=107.63 Aligned_cols=99 Identities=23% Similarity=0.345 Sum_probs=78.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~---------------------- 87 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAER-------------GYEVVGLDLHEEMLRVARRKAKERN---------------------- 87 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTT----------------------
T ss_pred CEEEEeCCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHhcC----------------------
Confidence 37999999999999999873 5689999999999999999886543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh-cccc--cccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF-GIRN--VTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~~--~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|+...+.. ++||+|++.. .+++ ..+...++++++++|+|||.+++.
T Consensus 88 --------------------~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 88 --------------------LKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp --------------------CCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------CceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2467777777766543 5799998753 2232 246789999999999999999874
No 108
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.52 E-value=2.3e-14 Score=107.14 Aligned_cols=97 Identities=9% Similarity=0.072 Sum_probs=80.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++. +.+++++|+++.+++.++++.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-------------~~~~~~~D~~~~~~~~~~~~~-------------------------- 74 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKEN-------------GTRVSGIEAFPEAAEQAKEKL-------------------------- 74 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTT-------------TCEEEEEESSHHHHHHHHTTS--------------------------
T ss_pred CcEEEeCCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHHhC--------------------------
Confidence 47999999999999998873 468999999999999888542
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC--CCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE--LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..+...|... .++.+++||+|++..+++++++...++++++++|+|||++++...+
T Consensus 75 ----------------------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 75 ----------------------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp ----------------------SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ----------------------CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1344455544 4556678999999999999999999999999999999999997654
No 109
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.51 E-value=1.5e-14 Score=113.01 Aligned_cols=127 Identities=13% Similarity=0.143 Sum_probs=83.4
Q ss_pred CeEEeeecCCCchH----HHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccccccc
Q psy889 1 MYILFYLVFPGDIA----FRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 76 (167)
.||+|+|||+|..+ +.+++.++... .+.+++|+|+|+.+++.|++....... .++
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~-------~~~~I~atDis~~~L~~Ar~~~y~~~~--------------~~~ 165 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAP-------GRWKVFASDIDTEVLEKARSGIYRLSE--------------LKT 165 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCT-------TSEEEEEEESCHHHHHHHHHTEEEGGG--------------GTT
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCC-------CCeEEEEEECCHHHHHHHHhcCCchhh--------------hhc
Confidence 37999999999854 44445442100 135899999999999999976521110 011
Q ss_pred CC--CCCCCC--------ceeeeeeccccccCCCCceEEeecccCCCCCC-ccchhhHhhhhcccccccH--HHHHHHHH
Q psy889 77 LP--IESDSY--------SAYTIAFGIRNIDIPNPRLRFLEANAEELPIE-SDSYSAYTIAFGIRNVTRI--DKALSEAY 143 (167)
Q Consensus 77 l~--~~~~~f--------d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~~~~~~~~--~~~l~~~~ 143 (167)
+| ....+| ..+.+...++ .++.|...|+.+.+++ .+.||+|+|.+++.+++.. ++++++++
T Consensus 166 ~~~~~~~~~f~~~~~~~~~~~~v~~~lr------~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~ 239 (274)
T 1af7_A 166 LSPQQLQRYFMRGTGPHEGLVRVRQELA------NYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFV 239 (274)
T ss_dssp SCHHHHHHHEEECCTTSCSEEEECHHHH------TTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHG
T ss_pred CCHHHHHHHhhccccCCCCceeechhhc------ccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHH
Confidence 11 000000 0111111121 3688999998775544 5789999999998887654 89999999
Q ss_pred HhcCCCcEEEE
Q psy889 144 RVLKPGGRFLC 154 (167)
Q Consensus 144 ~~LkpgG~l~~ 154 (167)
+.|+|||+|++
T Consensus 240 ~~L~pgG~L~l 250 (274)
T 1af7_A 240 PLLKPDGLLFA 250 (274)
T ss_dssp GGEEEEEEEEE
T ss_pred HHhCCCcEEEE
Confidence 99999999988
No 110
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.51 E-value=1.4e-14 Score=108.50 Aligned_cols=101 Identities=20% Similarity=0.143 Sum_probs=74.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh----cccCCCCCCcccccccccccC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD----LFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~d~~~l 77 (167)
+|||+|||+|.++..+++.. ++.+++|+|+|+.|++.+.++... .+.
T Consensus 30 ~vLDiGcG~G~~~~~la~~~-----------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~------------------ 80 (218)
T 3mq2_A 30 VVLDVGTGDGKHPYKVARQN-----------PSRLVVALDADKSRMEKISAKAAAKPAKGGL------------------ 80 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHC-----------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCC------------------
T ss_pred EEEEecCCCCHHHHHHHHHC-----------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCC------------------
Confidence 79999999999999999976 378999999999999865444322 111
Q ss_pred CCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHh---hhhcc--cccccHHHHHHHHHHhcCCCcEE
Q psy889 78 PIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYT---IAFGI--RNVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 78 ~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~---~~~~~--~~~~~~~~~l~~~~~~LkpgG~l 152 (167)
.++.+...|..++++.++. |.+. ..... +++++...++++++++|||||.+
T Consensus 81 -----------------------~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 136 (218)
T 3mq2_A 81 -----------------------PNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASF 136 (218)
T ss_dssp -----------------------TTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEE
T ss_pred -----------------------CceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEE
Confidence 3567777777776655444 4443 22222 25566789999999999999999
Q ss_pred EEE
Q psy889 153 LCL 155 (167)
Q Consensus 153 ~~~ 155 (167)
++.
T Consensus 137 ~~~ 139 (218)
T 3mq2_A 137 LVA 139 (218)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 111
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.51 E-value=3.4e-14 Score=106.54 Aligned_cols=94 Identities=24% Similarity=0.287 Sum_probs=79.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++. . +++|+|+.+++.++++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~--------------~---~~vD~s~~~~~~a~~~--------------------------- 84 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKI--------------K---IGVEPSERMAEIARKR--------------------------- 84 (219)
T ss_dssp SCEEEETCTTSTTHHHHTC--------------C---EEEESCHHHHHHHHHT---------------------------
T ss_pred CcEEEeCCCCCHHHHHHHH--------------H---hccCCCHHHHHHHHhc---------------------------
Confidence 4799999999999887654 2 9999999999999864
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
++.+...+....+..+++||+|++..+++++++...++++++++|+|||.+++.+...
T Consensus 85 ---------------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 85 ---------------------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp ---------------------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---------------------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 1455666776677777889999999999999999999999999999999999987653
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.51 E-value=4.1e-14 Score=113.81 Aligned_cols=101 Identities=11% Similarity=0.061 Sum_probs=84.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++|+|+| .+++.|+++....+.
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g------------~~~v~gvD~s-~~l~~a~~~~~~~~~--------------------- 113 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAG------------ARKVIGIECS-SISDYAVKIVKANKL--------------------- 113 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTT------------CSEEEEEECS-THHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeccchHHHHHHHHCC------------CCEEEEECcH-HHHHHHHHHHHHcCC---------------------
Confidence 479999999999999998852 4589999999 599999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhc---ccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG---IRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...+.++++++.++||+|++... +.+......++.++.++|||||+++.
T Consensus 114 -------------------~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 114 -------------------DHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp -------------------TTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred -------------------CCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 14588889998888877789999998654 33457789999999999999999874
No 113
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=1.7e-14 Score=107.40 Aligned_cols=107 Identities=12% Similarity=0.121 Sum_probs=78.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++...+.. .
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~---~---------------- 103 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQ------------AKKVTFLELDKTVANQLKKNLQTLKCS---S---------------- 103 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTT------------CSEEEEECSCHHHHHHHHHHHHHTTCC---T----------------
T ss_pred CeEEEcCCccCHHHHHHHHcc------------CCEEEEEECCHHHHHHHHHHHHHhCCC---c----------------
Confidence 379999999999999877643 358999999999999999998765430 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC--CCccc-hhhHhhhhcccccccHHHHHHHH--HHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--IESDS-YSAYTIAFGIRNVTRIDKALSEA--YRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~-~D~v~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~ 155 (167)
.++.+...|..+.. ....+ ||+|++...++ ......+++.+ .++|+|||.+++.
T Consensus 104 --------------------~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 104 --------------------EQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp --------------------TTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred --------------------cceEEEECCHHHHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEE
Confidence 24666666655432 12467 89888866543 45567788888 6689999999986
Q ss_pred eecc
Q psy889 156 EFSH 159 (167)
Q Consensus 156 ~~~~ 159 (167)
....
T Consensus 163 ~~~~ 166 (201)
T 2ift_A 163 TEKD 166 (201)
T ss_dssp EESS
T ss_pred ECCC
Confidence 6543
No 114
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.50 E-value=5.5e-14 Score=112.85 Aligned_cols=104 Identities=21% Similarity=0.195 Sum_probs=86.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +..+++++|+ +.+++.+++++...+.
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~-----------~~~~~~~~D~-~~~~~~a~~~~~~~~~--------------------- 231 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRA-----------PHVSATVLEM-AGTVDTARSYLKDEGL--------------------- 231 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-TTHHHHHHHHHHHTTC---------------------
T ss_pred cEEEEeCCcCcHHHHHHHHhC-----------CCCEEEEecC-HHHHHHHHHHHHhcCC---------------------
Confidence 379999999999999999877 3678999999 9999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+ +.+ ..||+|++..+++++++. ..++++++++|+|||++++.+..
T Consensus 232 -------------------~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 232 -------------------SDRVDVVEGDFFE-PLP-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -------------------TTTEEEEECCTTS-CCS-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------------------CCceEEEeCCCCC-CCC-CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 1368888888754 222 249999999999888765 58999999999999999999877
No 115
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.50 E-value=1.8e-14 Score=106.84 Aligned_cols=102 Identities=10% Similarity=-0.008 Sum_probs=81.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...+.
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 108 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLG------------AKSVLATDISDESMTAAEENAALNGI--------------------- 108 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCCCCHHHHHHHHCC------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999987632 45899999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|..+. .+++||+|++...+++ ...++++++++|+|||++++.++...
T Consensus 109 --------------------~~v~~~~~d~~~~--~~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 109 --------------------YDIALQKTSLLAD--VDGKFDLIVANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp --------------------CCCEEEESSTTTT--CCSCEEEEEEESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred --------------------CceEEEecccccc--CCCCceEEEECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 3367777777553 3478999998765443 57889999999999999999776543
No 116
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.50 E-value=2.4e-14 Score=109.66 Aligned_cols=45 Identities=13% Similarity=0.013 Sum_probs=39.3
Q ss_pred eEEeeecCCCchHHHHHHh--hccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 2 YILFYLVFPGDIAFRFLNY--VDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+|||+|||+|.++..++.. . ...+++|+|+|+.+++.|++++...
T Consensus 54 ~vLD~gcGsG~~~~~la~~~~~-----------~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 54 TLWDPCCGSGYLLTVLGLLHRR-----------SLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp EEEETTCTTSHHHHHHHHHTGG-----------GEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred eEEECCCCCCHHHHHHHHHhcc-----------CCCeEEEEECCHHHHHHHHHHHHHh
Confidence 7999999999999999886 3 2568999999999999999887643
No 117
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=7.1e-14 Score=105.26 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=79.6
Q ss_pred CeEEeeecC-CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC-C
Q psy889 1 MYILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P 78 (167)
Q Consensus 1 ~~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l-~ 78 (167)
.+|||+||| +|.++..+++.. +.+++++|+++.+++.+++++...+. ++++..+|+..+ +
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF------------NCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKG 118 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH------------CCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTT
T ss_pred CEEEEcCCCHHHHHHHHHHHhc------------CCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhh
Confidence 479999999 999999999865 57899999999999999999876543 566666665443 2
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
++.+.||.+.+..+......... .+. ... .....+.......+++++.++|||||++++...
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~~--------~~~-------~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGRV--------LTE-------REA--IGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp TCCSCEEEEEECCCCC--------------------------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCccccc--------cCh-------hhh--hccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 44566666666555433211000 000 000 000111223357889999999999999998643
No 118
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=2.8e-15 Score=122.69 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=80.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. ...
T Consensus 109 ~~VLDiGcG~G~~~~~l~~~-------------g~~v~gvD~s~~~~~~a~~~~--~~~--------------------- 152 (416)
T 4e2x_A 109 PFIVEIGCNDGIMLRTIQEA-------------GVRHLGFEPSSGVAAKAREKG--IRV--------------------- 152 (416)
T ss_dssp CEEEEETCTTTTTHHHHHHT-------------TCEEEEECCCHHHHHHHHTTT--CCE---------------------
T ss_pred CEEEEecCCCCHHHHHHHHc-------------CCcEEEECCCHHHHHHHHHcC--CCc---------------------
Confidence 48999999999999999873 568999999999999998651 100
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
....+...+...+++.+++||+|++..+++++++...++++++++|||||++++...
T Consensus 153 --------------------~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 153 --------------------RTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp --------------------ECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------------ceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 011122233444455568899999999999999999999999999999999999654
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.50 E-value=5e-14 Score=112.95 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=82.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++|+|+|+ +++.|++++...+.
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g------------~~~v~gvD~s~-~~~~a~~~~~~~~~--------------------- 111 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAG------------AKKVLGVDQSE-ILYQAMDIIRLNKL--------------------- 111 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------CSEEEEEESST-HHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeeccCcHHHHHHHHcC------------CCEEEEEChHH-HHHHHHHHHHHcCC---------------------
Confidence 379999999999999988742 35899999996 99999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh---cccccccHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF---GIRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
..++.+...|..+++++.++||+|++.. .+.+...+..++.++.++|||||.++
T Consensus 112 -------------------~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 112 -------------------EDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -------------------TTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------CCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 1467888888888777777899999765 34556678889999999999999998
No 120
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.50 E-value=5.2e-14 Score=109.38 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=83.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc-ccCCCCCCcccccccccccCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
.+|||+|||+|.++..+++.+. ++.+++++|+++.+++.+++++... +.
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~g~-------------------- 161 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALN----------GKGTLTVVERDEDNLKKAMDNLSEFYDI-------------------- 161 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHT----------TSSEEEEECSCHHHHHHHHHHHHTTSCC--------------------
T ss_pred CEEEEecCCCCHHHHHHHHHcC----------CCCEEEEEECCHHHHHHHHHHHHhcCCC--------------------
Confidence 4799999999999999998742 3678999999999999999998755 43
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+ ++.+++||+|++ +.++...++++++++|||||++++.+.+
T Consensus 162 ---------------------~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 162 ---------------------GNVRTSRSDIAD-FISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp ---------------------TTEEEECSCTTT-CCCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ---------------------CcEEEEECchhc-cCcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 457777777766 445567999987 3567788999999999999999997654
No 121
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.50 E-value=3.6e-14 Score=109.32 Aligned_cols=124 Identities=11% Similarity=0.113 Sum_probs=77.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
.+|||+|||+|.++..+++.. ..+++++|+++.+++.|++++...+. .+++++..+|+..++
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~------------~~~v~gvDi~~~~~~~a~~n~~~~~~----~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRT------------KAKIVGVEIQERLADMAKRSVAYNQL----EDQIEIIEYDLKKITDL 114 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTC------------CCEEEEECCSHHHHHHHHHHHHHTTC----TTTEEEECSCGGGGGGT
T ss_pred CEEEEcCCchhHHHHHHHHhc------------CCcEEEEECCHHHHHHHHHHHHHCCC----cccEEEEECcHHHhhhh
Confidence 479999999999999998864 34899999999999999999986654 234666666666654
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
++.+.||.+++..+....... .....+ ..... . -.....+...+++.+.++|+|||+++++.
T Consensus 115 ~~~~~fD~Ii~npPy~~~~~~----~~~~~~--------~~~~~--a--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 115 IPKERADIVTCNPPYFATPDT----SLKNTN--------EHFRI--A--RHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp SCTTCEEEEEECCCC---------------------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCccEEEECCCCCCCccc----cCCCCc--------hHHHh--h--hccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 445566666555444221000 000000 00000 0 00012345688999999999999999853
No 122
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.49 E-value=3e-14 Score=108.80 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=79.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++... +.++++++|+++.|++.++++....
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG----------~~G~V~avD~s~~~~~~l~~~a~~~----------------------- 125 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIG----------PRGRIYGVEFAPRVMRDLLTVVRDR----------------------- 125 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC----------TTCEEEEEECCHHHHHHHHHHSTTC-----------------------
T ss_pred CEEEEecCcCCHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHHhhHhh-----------------------
Confidence 5899999999999999999986 5789999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccC---CCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAE---ELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++..+..+.. ..+.....+|+|++. +.+..+...++.++++.|||||++++..
T Consensus 126 --------------------~ni~~V~~d~~~p~~~~~~~~~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 126 --------------------RNIFPILGDARFPEKYRHLVEGVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp --------------------TTEEEEESCTTCGGGGTTTCCCEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------cCeeEEEEeccCccccccccceEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 23555555443 344556778988753 3344567789999999999999999864
No 123
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.49 E-value=5.3e-14 Score=104.72 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=78.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.++++++..+.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~------------~~~V~~vD~s~~~l~~a~~~~~~~~~--------------------- 102 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRY------------AAGATLIEMDRAVSQQLIKNLATLKA--------------------- 102 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTT------------CSEEEEECSCHHHHHHHHHHHHHTTC---------------------
T ss_pred CeEEEeCCCcCHHHHHHHhcC------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999877643 35899999999999999999876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccccHHHHHHHHHH--hcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVTRIDKALSEAYR--VLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~ 157 (167)
.++.+...|... .+.....||+|++...++ ......+++.+.+ +|+|||++++...
T Consensus 103 --------------------~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 103 --------------------GNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp --------------------CSEEEECSCHHHHHSSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred --------------------CcEEEEECCHHHHHhhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 356677776654 344456788888765433 3456677887766 5999999998654
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
.
T Consensus 162 ~ 162 (202)
T 2fpo_A 162 V 162 (202)
T ss_dssp G
T ss_pred C
Confidence 4
No 124
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=6.5e-14 Score=107.42 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=82.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.+++++...+.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~g~--------------------- 113 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELP----------ADGQLLTLEADAHHAQVARENLQLAGV--------------------- 113 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSC----------TTCEEEEEECCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCchHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999998763 268999999999999999999987665
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCC--CccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPI--ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~--~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+ ++. ..++||+|++.. .......++++++++|||||++++.+.
T Consensus 114 -------------------~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 114 -------------------DQRVTLREGPALQSLESLGECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp -------------------TTTEEEEESCHHHHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred -------------------CCcEEEEEcCHHHHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 1357777776644 222 134799998744 345567789999999999999998655
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
.
T Consensus 172 ~ 172 (248)
T 3tfw_A 172 V 172 (248)
T ss_dssp S
T ss_pred C
Confidence 4
No 125
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.49 E-value=6.1e-14 Score=111.37 Aligned_cols=129 Identities=11% Similarity=0.040 Sum_probs=79.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. ...+++++|+++.+++.++++++..+. .++++..+|+..++..
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~----------~~~~v~avD~s~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMR----------NDGVIYAFDVDENRLRETRLNLSRLGV-----LNVILFHSSSLHIGEL 184 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHHTC-----CSEEEESSCGGGGGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhC----------CCCEEEEEcCCHHHHHHHHHHHHHhCC-----CeEEEEECChhhcccc
Confidence 4799999999999999998764 257899999999999999999987664 1355555665554433
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.+.||.+.+..+-+........ .+.... ...+-+ .........++++++++|||||++++.+++
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~--------p~~~~~-~~~~~~-----~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKN--------PERKWN-RTMDDI-----KFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC-----------------CCHHHH-----HHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCCEEEEeCCCCCcccccCC--------hhHhhc-CCHHHH-----HHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3445544444332211000000 000000 000000 001122368899999999999999997654
No 126
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.49 E-value=8.4e-14 Score=106.39 Aligned_cols=102 Identities=20% Similarity=0.175 Sum_probs=83.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc-ccCCCCCCcccccccccccCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++... +.
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~~D~~~~~~~~a~~~~~~~~g~-------------------- 147 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVG----------EKGLVESYEARPHHLAQAERNVRAFWQV-------------------- 147 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHHHHCCC--------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHhcCC--------------------
Confidence 3799999999999999999853 3678999999999999999988755 43
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+.++.++.||+|++ +.++...+++++.++|+|||++++.+.+
T Consensus 148 ---------------------~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 148 ---------------------ENVRFHLGKLEEAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp ---------------------CCEEEEESCGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred ---------------------CCEEEEECchhhcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4577777777666566678999887 2456778999999999999999997754
No 127
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=7.9e-14 Score=103.98 Aligned_cols=100 Identities=16% Similarity=0.005 Sum_probs=80.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... +..+++++|+++.+++.++++....+.
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 127 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVG----------EDGLVVSIERIPELAEKAERTLRKLGY--------------------- 127 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEECCCccHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999998773 247899999999999999998876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.++.+...|........+.||+|++..++++++ .+++++|||||.+++...
T Consensus 128 --------------------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 128 --------------------DNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp --------------------TTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred --------------------CCeEEEECCcccCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 346676766643222356799999988888766 478999999999998654
No 128
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=2.7e-14 Score=108.02 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=81.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|..+..+++.+. ++.+++++|+++.+++.|+++++..+.
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~---------------------- 106 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLA----------DNTTLTCIDPESEHQRQAKALFREAGY---------------------- 106 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSC----------TTSEEEEECSCHHHHHHHHHHHHHTTC----------------------
T ss_pred CEEEEcCCchHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC----------------------
Confidence 799999999999999999874 378999999999999999999987665
Q ss_pred CCCceeeeeeccccccCCC-CceEEeecccCCC-C-CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPN-PRLRFLEANAEEL-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~-~~~~~~~~d~~~~-~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
. .++.+..+|..+. + ..+++||+|++.. .......++++++++|||||++++-+.
T Consensus 107 ------------------~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 107 ------------------SPSRVRFLLSRPLDVMSRLANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp ------------------CGGGEEEECSCHHHHGGGSCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred ------------------CcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 1 2567777665442 1 2256799997753 234566789999999999999998443
No 129
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=7.4e-14 Score=110.78 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=82.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++... ...+++++|+|+.+++.+++++...+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~g~--------------------- 125 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVG----------EKGLVVSVEYSRKICEIAKRNVERLGI--------------------- 125 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCchHHHHHHHHhcC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4899999999999999998763 246799999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.++.+...|..+.....++||+|++..+++++. +++.++|||||++++...
T Consensus 126 --------------------~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 126 --------------------ENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp --------------------CSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred --------------------CCeEEEECChhhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 457777888776544557899999988887766 578899999999999653
No 130
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.49 E-value=9.6e-14 Score=105.08 Aligned_cols=95 Identities=14% Similarity=0.095 Sum_probs=74.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... ..+++++|+|+.+++.++++....
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~----------------------- 121 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIAD-----------KGIVYAIEYAPRIMRELLDACAER----------------------- 121 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTT-----------TSEEEEEESCHHHHHHHHHHTTTC-----------------------
T ss_pred CEEEEEcccCCHHHHHHHHHcC-----------CcEEEEEECCHHHHHHHHHHhhcC-----------------------
Confidence 4799999999999999998762 478999999999999999876432
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC----CCCCccchhhHhhhhcccccccH---HHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE----LPIESDSYSAYTIAFGIRNVTRI---DKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~D~v~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~ 153 (167)
.++.+...|... .+.. .+||+|++ .+++. ..++++++++|+|||+++
T Consensus 122 --------------------~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~ 175 (230)
T 1fbn_A 122 --------------------ENIIPILGDANKPQEYANIV-EKVDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGM 175 (230)
T ss_dssp --------------------TTEEEEECCTTCGGGGTTTS-CCEEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCeEEEECCCCCcccccccC-ccEEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEE
Confidence 246666666655 4444 67898872 33444 777999999999999999
Q ss_pred EE
Q psy889 154 CL 155 (167)
Q Consensus 154 ~~ 155 (167)
+.
T Consensus 176 i~ 177 (230)
T 1fbn_A 176 IA 177 (230)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 131
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.48 E-value=1.1e-13 Score=114.23 Aligned_cols=105 Identities=9% Similarity=-0.040 Sum_probs=79.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHH-------HHHHHhcccCCCCCCcccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVG-------EQRARDLFKVPVPNPRLRFLEAN 73 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a-------~~~~~~~~~~~~~~~~~~~~~~d 73 (167)
.+|||+|||+|.++..++...+ ..+++|+|+++.+++.| ++++...+..
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g-----------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~------------- 299 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECG-----------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR------------- 299 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHC-----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-------------
T ss_pred CEEEEeCCCcCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-------------
Confidence 4799999999999999998763 45799999999999998 7776654420
Q ss_pred cccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCC--CC--CccchhhHhhhhcccccccHHHHHHHHHHhcCCC
Q psy889 74 AEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PI--ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG 149 (167)
Q Consensus 74 ~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~--~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~Lkpg 149 (167)
..++.+..++.... ++ ..+.||+|+++..+ +.++...+|++++++||||
T Consensus 300 --------------------------~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 300 --------------------------LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVG 352 (433)
T ss_dssp --------------------------CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTT
T ss_pred --------------------------CCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCC
Confidence 03566666533211 11 24679999986655 3477888999999999999
Q ss_pred cEEEEEe
Q psy889 150 GRFLCLE 156 (167)
Q Consensus 150 G~l~~~~ 156 (167)
|.+++.+
T Consensus 353 G~lVi~d 359 (433)
T 1u2z_A 353 CKIISLK 359 (433)
T ss_dssp CEEEESS
T ss_pred eEEEEee
Confidence 9999974
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.48 E-value=7.9e-14 Score=108.80 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=81.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.+++++...+.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~------------~~~V~~vD~s~~~~~~a~~n~~~n~~--------------------- 173 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYG------------KAKVIAIEKDPYTFKFLVENIHLNKV--------------------- 173 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHT------------CCEEEEECCCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecccCCHHHHHHHHhC------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999999865 23799999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++.+...|..+... ...||+|++.. ......++.+++++|+|||.+++.+++.
T Consensus 174 -------------------~~~v~~~~~D~~~~~~-~~~fD~Vi~~~----p~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 174 -------------------EDRMSAYNMDNRDFPG-ENIADRILMGY----VVRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp -------------------TTTEEEECSCTTTCCC-CSCEEEEEECC----CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -------------------CceEEEEECCHHHhcc-cCCccEEEECC----chhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 1346777777776654 56789887743 2345678899999999999999988774
No 133
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.48 E-value=2.2e-14 Score=108.24 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=73.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~-------------------------- 90 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQ-------------AARWAAYDFSPELLKLARANA-------------------------- 90 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHC--------------------------
T ss_pred CeEEEeCCCCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhC--------------------------
Confidence 47999999999999999874 568999999999999999871
Q ss_pred CCCCceeeeeeccccccCCCCceEEeeccc-CCCCCC-ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANA-EELPIE-SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
.++.+...|. ..+++. +++||+|++. .+...++++++++|||||.++
T Consensus 91 --------------------~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 91 --------------------PHADVYEWNGKGELPAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp --------------------TTSEEEECCSCSSCCTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred --------------------CCceEEEcchhhccCCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEE
Confidence 3567777777 456666 7789999875 467788899999999999998
No 134
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.48 E-value=9.2e-14 Score=107.65 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=83.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc-c-cCCCCCCcccccccccccCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-F-KVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~-~-~~~~~~~~~~~~~~d~~~l~ 78 (167)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++... + .
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~------------------- 151 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVG----------PAGQVISYEQRADHAEHARRNVSGCYGQP------------------- 151 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEECSCHHHHHHHHHHHHHHHTSC-------------------
T ss_pred CEEEEEcccccHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCC-------------------
Confidence 3799999999999999998763 3678999999999999999998765 3 1
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+.++.++.||+|++ +.++...++.++.++|+|||++++...+
T Consensus 152 ---------------------~~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 152 ---------------------PDNWRLVVSDLADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp ---------------------CTTEEEECSCGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ---------------------CCcEEEEECchHhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 04577777777666665677999887 2456678999999999999999997654
No 135
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.48 E-value=5.4e-14 Score=109.60 Aligned_cols=109 Identities=13% Similarity=-0.019 Sum_probs=81.7
Q ss_pred eEEeeecCC--CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC
Q psy889 2 YILFYLVFP--GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 2 ~vLD~g~G~--G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
+|||+|||+ +..+..+++... ++.+++++|.|+.|++.+++++.....
T Consensus 81 q~LDLGcG~pT~~~~~~la~~~~----------P~arVv~VD~sp~mLa~Ar~~l~~~~~-------------------- 130 (277)
T 3giw_A 81 QFLDIGTGIPTSPNLHEIAQSVA----------PESRVVYVDNDPIVLTLSQGLLASTPE-------------------- 130 (277)
T ss_dssp EEEEESCCSCCSSCHHHHHHHHC----------TTCEEEEEECCHHHHHTTHHHHCCCSS--------------------
T ss_pred EEEEeCCCCCcccHHHHHHHHHC----------CCCEEEEEeCChHHHHHHHHHhccCCC--------------------
Confidence 699999997 445566655543 478999999999999999988753321
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCC------CCccchh-----hHhhhhccccccc---HHHHHHHHHHh
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP------IESDSYS-----AYTIAFGIRNVTR---IDKALSEAYRV 145 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~D-----~v~~~~~~~~~~~---~~~~l~~~~~~ 145 (167)
.++.++.+|+.+.. .....|| .|+++.++||+++ ...+++++++.
T Consensus 131 ---------------------~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~ 189 (277)
T 3giw_A 131 ---------------------GRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEP 189 (277)
T ss_dssp ---------------------SEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTT
T ss_pred ---------------------CcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHh
Confidence 35677777766541 0123355 4778889999988 46899999999
Q ss_pred cCCCcEEEEEeecccC
Q psy889 146 LKPGGRFLCLEFSHVN 161 (167)
Q Consensus 146 LkpgG~l~~~~~~~~~ 161 (167)
|+|||+|++.+++...
T Consensus 190 L~PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 190 LPSGSYLAMSIGTAEF 205 (277)
T ss_dssp SCTTCEEEEEEECCTT
T ss_pred CCCCcEEEEEeccCCC
Confidence 9999999999887643
No 136
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=2.8e-14 Score=108.29 Aligned_cols=99 Identities=13% Similarity=0.022 Sum_probs=68.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC-hHHHHHH---HHHHHhcccCCCCCCcccccccccccC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVG---EQRARDLFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~~~d~~~l 77 (167)
+|||+|||+|.++..+++.. ++.+++|+|+| +.|++.| +++....+.
T Consensus 27 ~vLDiGCG~G~~~~~la~~~-----------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------------------ 77 (225)
T 3p2e_A 27 VHIDLGTGDGRNIYKLAIND-----------QNTFYIGIDPVKENLFDISKKIIKKPSKGGL------------------ 77 (225)
T ss_dssp EEEEETCTTSHHHHHHHHTC-----------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------------------
T ss_pred EEEEEeccCcHHHHHHHHhC-----------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------------------
Confidence 79999999999999998654 37889999999 7777776 655544443
Q ss_pred CCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc--------ccccHHHHHHHHHHhcCCC
Q psy889 78 PIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR--------NVTRIDKALSEAYRVLKPG 149 (167)
Q Consensus 78 ~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~--------~~~~~~~~l~~~~~~Lkpg 149 (167)
.++.+...+.+.++. ..+|.|.+..+.. ...+...++++++++||||
T Consensus 78 -----------------------~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpG 132 (225)
T 3p2e_A 78 -----------------------SNVVFVIAAAESLPF--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKE 132 (225)
T ss_dssp -----------------------SSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEE
T ss_pred -----------------------CCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCC
Confidence 356677777766642 2234333322111 1122356899999999999
Q ss_pred cEEEE
Q psy889 150 GRFLC 154 (167)
Q Consensus 150 G~l~~ 154 (167)
|++++
T Consensus 133 G~l~i 137 (225)
T 3p2e_A 133 AHFEF 137 (225)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99998
No 137
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.48 E-value=1.1e-13 Score=112.49 Aligned_cols=108 Identities=16% Similarity=0.062 Sum_probs=82.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ++.+++++|+|+.+++.+++++...+...
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~-----------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~------------------- 273 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKN-----------PQAKVVFVDESPMAVASSRLNVETNMPEA------------------- 273 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-----------TTCEEEEEESCHHHHHHHHHHHHHHCGGG-------------------
T ss_pred CeEEEEeCcchHHHHHHHHHC-----------CCCEEEEEECcHHHHHHHHHHHHHcCCCc-------------------
Confidence 379999999999999999976 37899999999999999999987654300
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc-----cHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT-----RIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
..++.+...|..+ ++.+++||+|+++..+++.. ....++++++++|+|||.++++
T Consensus 274 -------------------~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 274 -------------------LDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp -------------------GGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------------------CceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 0246667777665 34557899999877766421 2347899999999999999996
Q ss_pred eec
Q psy889 156 EFS 158 (167)
Q Consensus 156 ~~~ 158 (167)
.-.
T Consensus 334 ~n~ 336 (375)
T 4dcm_A 334 ANR 336 (375)
T ss_dssp EET
T ss_pred EEC
Confidence 543
No 138
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.47 E-value=1.2e-13 Score=105.60 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=82.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.|++++...+.
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~----------~~~~v~~~D~~~~~~~~a~~~~~~~~~--------------------- 143 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVG----------PEGRVVSYEIREDFAKLAWENIKWAGF--------------------- 143 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEECSCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEecCCchHHHHHHHHHhC----------CCeEEEEEecCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999999853 378999999999999999999877654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+. +.+.+||+|++ +.++...++++++++|+|||++++...+
T Consensus 144 -------------------~~~v~~~~~d~~~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 144 -------------------DDRVTIKLKDIYEG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp -------------------TTTEEEECSCGGGC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred -------------------CCceEEEECchhhc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 13477777777643 45567999887 3566778999999999999999986643
No 139
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.47 E-value=1.9e-15 Score=114.82 Aligned_cols=132 Identities=11% Similarity=0.067 Sum_probs=88.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ .+.+++++|+|+.+++.+++++...+. .+++++..+|+..++ +
T Consensus 80 ~~vLD~gcG~G~~~~~la~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~-~ 141 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFAL-------------TGMRVIAIDIDPVKIALARNNAEVYGI----ADKIEFICGDFLLLA-S 141 (241)
T ss_dssp SEEEETTCTTSHHHHHHHH-------------TTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHG-G
T ss_pred CEEEECccccCHHHHHHHH-------------cCCEEEEEECCHHHHHHHHHHHHHcCC----CcCeEEEECChHHhc-c
Confidence 4799999999999999987 367899999999999999999876543 247889999988877 6
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh--cccc---cccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF--GIRN---VTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--~~~~---~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.+.||.+.+..+.+........+ .+.... ..++.. +++... .... .-.....+.++.++|+|||.+.+.
T Consensus 142 ~~~~D~v~~~~~~~~~~~~~~~~----~~~~~~-L~pgG~-~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDYATAET----FDIRTM-MSPDGF-EIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp GCCCSEEEECCCCSSGGGGGSSS----BCTTTS-CSSCHH-HHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred cCCCCEEEECCCcCCcchhhhHH----HHHHhh-cCCcce-eHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEE
Confidence 67899999888877654331111 111111 233333 232211 0000 011122456788899999988774
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 216 ~ 216 (241)
T 3gdh_A 216 Q 216 (241)
T ss_dssp E
T ss_pred e
Confidence 3
No 140
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.47 E-value=6.1e-14 Score=108.06 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=76.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.+ .+.+++++|+|+.+++.++++.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~-----------~~~~v~~vD~s~~~~~~a~~~~-------------------------- 129 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADAL-----------PEITTFGLDVSKVAIKAAAKRY-------------------------- 129 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTC-----------TTSEEEEEESCHHHHHHHHHHC--------------------------
T ss_pred CEEEEECCCCCHHHHHHHHhC-----------CCCeEEEEeCCHHHHHHHHHhC--------------------------
Confidence 379999999999999999865 2678999999999999998763
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|...+++.+++||+|++..+ ...+++++++|||||.+++.+...
T Consensus 130 --------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 130 --------------------PQVTFCVASSHRLPFSDTSMDAIIRIYA-------PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp --------------------TTSEEEECCTTSCSBCTTCEEEEEEESC-------CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred --------------------CCcEEEEcchhhCCCCCCceeEEEEeCC-------hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 2356667777777777778999987543 235889999999999999987654
No 141
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.47 E-value=5.4e-14 Score=112.75 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=80.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|..+..+++.. +..+++++|++ .++. +++....+.
T Consensus 187 ~vLDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~~-~~~~--~~~~~~~~~---------------------- 230 (348)
T 3lst_A 187 TVADVGGGRGGFLLTVLREH-----------PGLQGVLLDRA-EVVA--RHRLDAPDV---------------------- 230 (348)
T ss_dssp EEEEETCTTSHHHHHHHHHC-----------TTEEEEEEECH-HHHT--TCCCCCGGG----------------------
T ss_pred eEEEECCccCHHHHHHHHHC-----------CCCEEEEecCH-HHhh--cccccccCC----------------------
Confidence 79999999999999999987 36789999984 4443 222221111
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEeecc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
..++.+...|+. .+.+ +||+|++..++|++++. .+++++++++|||||++++.+...
T Consensus 231 ------------------~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 231 ------------------AGRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp ------------------TTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred ------------------CCCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 146888888885 2222 79999999999998877 699999999999999999998765
Q ss_pred cCC
Q psy889 160 VNN 162 (167)
Q Consensus 160 ~~~ 162 (167)
++.
T Consensus 290 ~~~ 292 (348)
T 3lst_A 290 PEG 292 (348)
T ss_dssp CSS
T ss_pred CCC
Confidence 553
No 142
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=6.4e-14 Score=106.33 Aligned_cols=102 Identities=21% Similarity=0.181 Sum_probs=82.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++... +..+++++|+++.+++.++++++..+.
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~-----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 120 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASIS-----------DDIHVTTIERNETMIQYAKQNLATYHF--------------------- 120 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTC-----------TTCEEEEEECCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeCchhHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999999855 378999999999999999999987654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C-CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..++.+...|..+. + ..+++||+|++.. .......++++++++|+|||++++-+
T Consensus 121 -------------------~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 121 -------------------ENQVRIIEGNALEQFENVNDKVYDMIFIDA---AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp -------------------TTTEEEEESCGGGCHHHHTTSCEEEEEEET---TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred -------------------CCcEEEEECCHHHHHHhhccCCccEEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 13677877777553 3 2357899998653 35567789999999999999998843
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=4.9e-15 Score=109.79 Aligned_cols=129 Identities=16% Similarity=0.039 Sum_probs=67.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ++.+++++|+|+.+++.+++++...+. ++++..+|+.+ +++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~-----------~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~-~~~ 93 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALAC-----------PGVSVTAVDLSMDALAVARRNAERFGA------VVDWAAADGIE-WLI 93 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHC-----------TTEEEEEEECC-------------------------CCHHHHHH-HHH
T ss_pred CEEEEecCCHhHHHHHHHHhC-----------CCCeEEEEECCHHHHHHHHHHHHHhCC------ceEEEEcchHh-hhh
Confidence 379999999999999999976 367899999999999999988765432 67788888777 554
Q ss_pred C-----CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh-hcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 S-----DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA-FGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~-----~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
. +.||.+.+..+....... ..+......++-.... ..-........++++++++|||||++++
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEI-----------DQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC-----------------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred hhhhccCcccEEEECCCCCCCccc-----------cccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 4 788888777665321110 0000000000100000 0011123347888999999999999655
Q ss_pred Eeec
Q psy889 155 LEFS 158 (167)
Q Consensus 155 ~~~~ 158 (167)
.++.
T Consensus 163 ~~~~ 166 (215)
T 4dzr_A 163 LEVG 166 (215)
T ss_dssp EECT
T ss_pred EEEC
Confidence 5654
No 144
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.46 E-value=8.3e-14 Score=113.08 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=82.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++|+|+| .+++.++++++..+.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g------------~~~V~gvD~s-~~~~~a~~~~~~~~~--------------------- 110 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAG------------ARKVYAVEAT-KMADHARALVKANNL--------------------- 110 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTT------------CSEEEEEESS-TTHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeccCcCHHHHHHHhcC------------CCEEEEEccH-HHHHHHHHHHHHcCC---------------------
Confidence 479999999999999998853 3489999999 999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc---ccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV---TRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..++.++..++++++.. ++||+|++....+.. .....++..++++|||||.+++..
T Consensus 111 -------------------~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 111 -------------------DHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp -------------------TTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred -------------------CCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 14578888888877665 789999985543333 557889999999999999998744
No 145
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=1.6e-13 Score=99.14 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=80.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ ...+++++|+++.+++.++++....+.
T Consensus 37 ~~vLdiG~G~G~~~~~l~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 82 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK-------------RCKFVYAIDYLDGAIEVTKQNLAKFNI--------------------- 82 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT-------------TSSEEEEEECSHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHh-------------cCCeEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999987 268899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|..+ +...+.||+|++..+ .+...++++++++ |||.+++.+..
T Consensus 83 --------------------~~~~~~~~d~~~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 83 --------------------KNCQIIKGRAED-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp --------------------CSEEEEESCHHH-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred --------------------CcEEEEECCccc-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 457777777665 444568999998765 6778899999988 99999997644
No 146
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.46 E-value=2e-13 Score=104.42 Aligned_cols=45 Identities=13% Similarity=-0.046 Sum_probs=40.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+|||+|||+|.++..++... +...++|+|+|+.+++.+++++...
T Consensus 52 ~vLDiGcG~G~~~~~la~~~-----------~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 52 TIADIGCGFGGLMIDLSPAF-----------PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp EEEEETCTTSHHHHHHHHHS-----------TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHhC-----------CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 69999999999999999876 3578999999999999999987654
No 147
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.45 E-value=8.7e-14 Score=112.55 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=81.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+ +..+++++|+ +.+++.++++
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~--------------------------- 245 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKY-----------PSINAINFDL-PHVIQDAPAF--------------------------- 245 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHTTCCCC---------------------------
T ss_pred CEEEEeCCCcCHHHHHHHHhC-----------CCCEEEEEeh-HHHHHhhhhc---------------------------
Confidence 379999999999999999988 3788999999 7777655421
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|+.+ +.+.+ |+|++..++|++++. .++|++++++|+|||++++.++.
T Consensus 246 --------------------~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 246 --------------------SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp --------------------TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred --------------------CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 357888888765 44433 999999999987764 58899999999999999999987
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 303 ~~~~ 306 (368)
T 3reo_A 303 LPPS 306 (368)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 6654
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.45 E-value=2.1e-13 Score=108.78 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=81.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|++ .+++.++++....+.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g------------~~~v~~vD~s-~~~~~a~~~~~~~~~--------------------- 85 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHG------------AKHVIGVDMS-SIIEMAKELVELNGF--------------------- 85 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTC------------CSEEEEEESS-THHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCccHHHHHHHHHCC------------CCEEEEEChH-HHHHHHHHHHHHcCC---------------------
Confidence 479999999999999988742 3589999999 599999998876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhc---ccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG---IRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...+..+++.+..+||+|++... +.+...+..++.++.++|||||.++.
T Consensus 86 -------------------~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 86 -------------------SDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp -------------------TTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred -------------------CCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 14678888888877766678999998643 33456678899999999999999973
No 149
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.45 E-value=1.4e-13 Score=106.94 Aligned_cols=127 Identities=13% Similarity=0.101 Sum_probs=79.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... +..+++++|+|+.+++.++++....+. .++++..+|.... ++
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~-----------~~~~v~~vD~s~~~l~~a~~n~~~~~~-----~~v~~~~~d~~~~-~~ 173 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASER-----------PDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHILQSDWFSA-LA 173 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHC-----------TTSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCSTTGG-GT
T ss_pred CEEEEecCCccHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEcchhhh-cc
Confidence 379999999999999999876 367899999999999999999876654 1456666665542 22
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.+.||.+++.++....... ..........| +..+. ..-..+.....+++++.++|+|||++++.
T Consensus 174 ~~~fD~Iv~npPy~~~~~~----~l~~~v~~~~p------~~al~-~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDEQDP----HLQQGDVRFEP------LTALV-AADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TCCEEEEEECCCCBCTTCH----HHHSSGGGSSC------STTTB-CHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCcccc----ccChhhhhcCc------HHHHc-CCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4456655555444221000 00000000000 00000 00011245678899999999999999984
No 150
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.45 E-value=7.9e-14 Score=111.77 Aligned_cols=102 Identities=11% Similarity=0.069 Sum_probs=82.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.. +..+++++|+|+.+++.++++....+.
T Consensus 199 ~VLDlGcG~G~~~~~la~~~-----------~~~~v~~vD~s~~~l~~a~~~~~~~~~---------------------- 245 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHS-----------PKIRLTLCDVSAPAVEASRATLAANGV---------------------- 245 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHC-----------TTCBCEEEESBHHHHHHHHHHHHHTTC----------------------
T ss_pred eEEEecCccCHHHHHHHHHC-----------CCCEEEEEECCHHHHHHHHHHHHHhCC----------------------
Confidence 79999999999999999876 356899999999999999999875443
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccc-----cccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRN-----VTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
...+...|..... +++||+|+++..+++ ......++++++++|||||.++++.
T Consensus 246 --------------------~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 246 --------------------EGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp --------------------CCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------CCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 2345556654432 568999999887764 3457889999999999999999976
Q ss_pred ec
Q psy889 157 FS 158 (167)
Q Consensus 157 ~~ 158 (167)
..
T Consensus 304 ~~ 305 (343)
T 2pjd_A 304 NA 305 (343)
T ss_dssp ET
T ss_pred cC
Confidence 44
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.45 E-value=5.7e-14 Score=101.77 Aligned_cols=106 Identities=11% Similarity=0.070 Sum_probs=77.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...+.
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 79 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRG------------MSAAVLVEKNRKAQAIIQDNIIMTKA--------------------- 79 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CCEEEEECCCHHHHHHHHHHHHTTTC---------------------
T ss_pred CeEEEeCCCCCHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999988742 46899999999999999999875543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccccHHHHHHHHH--HhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVTRIDKALSEAY--RVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+ .+...+.||+|++...++ .......++.+. ++|+|||.+++...
T Consensus 80 -------------------~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 80 -------------------ENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp -------------------GGGEEEECSCHHHHHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -------------------CCceEEEECcHHHhHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 0246666666654 232335689998865432 234456666666 99999999999665
Q ss_pred cc
Q psy889 158 SH 159 (167)
Q Consensus 158 ~~ 159 (167)
..
T Consensus 140 ~~ 141 (177)
T 2esr_A 140 KT 141 (177)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 152
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.45 E-value=2e-13 Score=102.58 Aligned_cols=106 Identities=18% Similarity=0.144 Sum_probs=78.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++... ...+++++|+++.+++.++++....+.....
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~----------------- 131 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVG----------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLS----------------- 131 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC----------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHH-----------------
T ss_pred CEEEEEcCCcCHHHHHHHHHhC----------CCcEEEEEeCCHHHHHHHHHHHHhhcccccC-----------------
Confidence 4799999999999999998763 2468999999999999999988653210000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|........+.||+|++...++. ++++++++|||||++++....
T Consensus 132 -------------------~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 132 -------------------SGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPV------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp -------------------TSSEEEEESCGGGCCGGGCCEEEEEECSBBSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred -------------------CCcEEEEECCcccCcccCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEEEEec
Confidence 03567777776654444567999988765543 346789999999999996543
No 153
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.44 E-value=1.3e-13 Score=103.44 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=80.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.+++++...+.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 108 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLS----------SGGRVVTLEASEKHADIARSNIERANL--------------------- 108 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCC----------SSCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999998763 267999999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C-C---CccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P-I---ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~---~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
..++.+...|..+. + . ..+.||+|++... ......++++++++|+|||.+++.
T Consensus 109 -------------------~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 109 -------------------NDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp -------------------TTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred -------------------CCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEe
Confidence 13577777766432 1 1 1156999987543 445678999999999999999885
Q ss_pred eec
Q psy889 156 EFS 158 (167)
Q Consensus 156 ~~~ 158 (167)
+..
T Consensus 167 ~~~ 169 (223)
T 3duw_A 167 NVV 169 (223)
T ss_dssp SCS
T ss_pred CCC
Confidence 543
No 154
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.44 E-value=5.5e-14 Score=113.66 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=82.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .
T Consensus 211 ~~vLDvG~G~G~~~~~l~~~~-----------~~~~~~~~D~-~~~~~~a~~------~--------------------- 251 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIISKY-----------PLIKGINFDL-PQVIENAPP------L--------------------- 251 (372)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHTTCCC------C---------------------
T ss_pred CEEEEeCCCCcHHHHHHHHHC-----------CCCeEEEeCh-HHHHHhhhh------c---------------------
Confidence 379999999999999999987 3678999999 888766542 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|+.. +.+. ||+|++..++|++++.. .++++++++|+|||++++.++.
T Consensus 252 --------------------~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 252 --------------------SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp --------------------TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------------------CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 347777888766 4433 89999999999998876 9999999999999999999887
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 309 ~~~~ 312 (372)
T 1fp1_D 309 LPEE 312 (372)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 6654
No 155
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.44 E-value=8.1e-14 Score=104.62 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=81.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++..+. .+.+++++|+++.+++.+++++...+.
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 114 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALP----------KDGTLITCDVDEKSTALAKEYWEKAGL--------------------- 114 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCC----------TTCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCcchHHHHHHHHhCC----------CCCEEEEEeCCHHHHHHHHHHHHHCCC---------------------
Confidence 4799999999999999998763 268999999999999999999887664
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCC-----ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIE-----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~-----~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...|..+. +.. .++||+|++.. .......++++++++|+|||++++
T Consensus 115 -------------------~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 115 -------------------SDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp -------------------TTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCceEEEeCCHHHHHHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 13467777665432 111 16799998543 345677899999999999999998
Q ss_pred Eeec
Q psy889 155 LEFS 158 (167)
Q Consensus 155 ~~~~ 158 (167)
.+..
T Consensus 173 ~~~~ 176 (225)
T 3tr6_A 173 DNVL 176 (225)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 6654
No 156
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=5.7e-14 Score=102.20 Aligned_cols=106 Identities=12% Similarity=0.029 Sum_probs=78.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+++.+++.+++++...+.
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 92 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRG------------MDKSICIEKNFAALKVIKENIAITKE--------------------- 92 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CCEEEeCCccCHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHHHHHhCC---------------------
Confidence 379999999999999887732 46899999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC----CCccchhhHhhhhcccccccHHHHHHHH--HHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP----IESDSYSAYTIAFGIRNVTRIDKALSEA--YRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~ 154 (167)
..++.+...|..+.. ....+||+|++...++ .......+..+ +++|+|||.+++
T Consensus 93 -------------------~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 93 -------------------PEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp -------------------GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -------------------CcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEE
Confidence 034666666654421 1246799998865533 34556667766 889999999998
Q ss_pred Eeecc
Q psy889 155 LEFSH 159 (167)
Q Consensus 155 ~~~~~ 159 (167)
.....
T Consensus 153 ~~~~~ 157 (187)
T 2fhp_A 153 ETDKT 157 (187)
T ss_dssp EEETT
T ss_pred EeCCc
Confidence 65444
No 157
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.44 E-value=1.1e-13 Score=110.98 Aligned_cols=100 Identities=13% Similarity=0.064 Sum_probs=82.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++ .
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~------~--------------------- 230 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETF-----------PKLKCIVFDR-PQVVENLSG------S--------------------- 230 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHTTCCC------B---------------------
T ss_pred ceEEEeCCCccHHHHHHHHHC-----------CCCeEEEeeC-HHHHhhccc------C---------------------
Confidence 379999999999999999887 3678999999 888876653 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCC---CcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKP---GGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~Lkp---gG~l~~~ 155 (167)
.++.+...|+.. +.+ .||+|++..++|++++.. +++++++++||| ||++++.
T Consensus 231 --------------------~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 231 --------------------NNLTYVGGDMFT-SIP--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp --------------------TTEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred --------------------CCcEEEeccccC-CCC--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 247777777754 333 399999999999988876 999999999999 9999999
Q ss_pred eecccCC
Q psy889 156 EFSHVNN 162 (167)
Q Consensus 156 ~~~~~~~ 162 (167)
++..++.
T Consensus 288 e~~~~~~ 294 (352)
T 1fp2_A 288 DMVIDKK 294 (352)
T ss_dssp ECEECTT
T ss_pred EeecCCC
Confidence 8876543
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=1.7e-13 Score=105.83 Aligned_cols=121 Identities=11% Similarity=0.069 Sum_probs=78.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh---cccCCCCCCcccccccccccC-
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD---LFKVPVPNPRLRFLEANAEEL- 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~d~~~l- 77 (167)
+|||+|||+|.++..++... +..+++++|+++.+++.+++++.. .+. .+++++..+|+...
T Consensus 39 ~VLDlG~G~G~~~l~la~~~-----------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l----~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 39 RIADLGAGAGAAGMAVAARL-----------EKAEVTLYERSQEMAEFARRSLELPDNAAF----SARIEVLEADVTLRA 103 (260)
T ss_dssp EEEECCSSSSHHHHHHHHHC-----------TTEEEEEEESSHHHHHHHHHHTTSGGGTTT----GGGEEEEECCTTCCH
T ss_pred EEEEeCChHhHHHHHHHHhC-----------CCCeEEEEECCHHHHHHHHHHHHhhhhCCC----cceEEEEeCCHHHHh
Confidence 79999999999999999876 367899999999999999998865 332 22466677776665
Q ss_pred ------CCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc-ccccHHHHHHHHHHhcCCCc
Q psy889 78 ------PIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR-NVTRIDKALSEAYRVLKPGG 150 (167)
Q Consensus 78 ------~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~l~~~~~~LkpgG 150 (167)
+++.+.||.+++.++..... .....+. .-. ...+ .......+++.+.++|+|||
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~------~~~~~~~--------~~~-----~a~~~~~~~~~~~l~~~~~~LkpgG 164 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAG------DRRTPDA--------LKA-----EAHAMTEGLFEDWIRTASAIMVSGG 164 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC----------------------------------------CCHHHHHHHHHHHEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCC------CCCCcCH--------HHH-----HHhhcCcCCHHHHHHHHHHHcCCCC
Confidence 24556666666665443211 0000000 000 0001 12346788999999999999
Q ss_pred EEEEEe
Q psy889 151 RFLCLE 156 (167)
Q Consensus 151 ~l~~~~ 156 (167)
++++..
T Consensus 165 ~l~~~~ 170 (260)
T 2ozv_A 165 QLSLIS 170 (260)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998843
No 159
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.44 E-value=3.4e-13 Score=102.05 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=75.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... +..+++++|+|+.+++.+.++....
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g----------~~~~v~gvD~s~~~i~~~~~~a~~~----------------------- 125 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVG----------PDGLVYAVEFSHRSGRDLINLAKKR----------------------- 125 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTCEEEEECCCHHHHHHHHHHHHHC-----------------------
T ss_pred CEEEEEcccCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHhhcc-----------------------
Confidence 4799999999999999999863 2578999999999888887766532
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC---CCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE---LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.++.+...|... ++...++||+|++... .......++.+++++|||||++++..
T Consensus 126 --------------------~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 126 --------------------TNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp --------------------TTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------CCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 245666666655 2334567999988443 22223556889999999999999943
No 160
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.44 E-value=8.6e-14 Score=103.71 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=79.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.+++++...+.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 106 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAIS----------ISSRVVMIDPDRDNVEHARRMLHDNGL--------------------- 106 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHSG---------------------
T ss_pred CEEEEEcCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHCCC---------------------
Confidence 3799999999999999998763 268999999999999999999876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..++.+...|..+. +..++ ||+|++.. ...+...++++++++|+|||++++.+
T Consensus 107 -------------------~~~v~~~~~d~~~~~~~~~~-fD~v~~~~---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 107 -------------------IDRVELQVGDPLGIAAGQRD-IDILFMDC---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp -------------------GGGEEEEESCHHHHHTTCCS-EEEEEEET---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred -------------------CceEEEEEecHHHHhccCCC-CCEEEEcC---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 13566777666442 33335 89988753 24567889999999999999999854
No 161
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=6.3e-14 Score=114.32 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=82.8
Q ss_pred CeEEeeecC------CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccccc
Q psy889 1 MYILFYLVF------PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (167)
Q Consensus 1 ~~vLD~g~G------~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 74 (167)
.+|||+||| +|..+..++..+- +..+++|+|+|+.|. ...
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~f----------P~a~V~GVDiSp~m~---------~~~--------------- 263 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSFF----------PRGQIYGLDIMDKSH---------VDE--------------- 263 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHHC----------TTCEEEEEESSCCGG---------GCB---------------
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHhC----------CCCEEEEEECCHHHh---------hcC---------------
Confidence 489999999 7888888877642 378999999999872 111
Q ss_pred ccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCC------ccchhhHhhhhcccccccHHHHHHHHHHhcCC
Q psy889 75 EELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIE------SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKP 148 (167)
Q Consensus 75 ~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~D~v~~~~~~~~~~~~~~~l~~~~~~Lkp 148 (167)
.++.+.++|..++++. +++||+|++.. .++..+...+|++++++|||
T Consensus 264 --------------------------~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKP 316 (419)
T 3sso_A 264 --------------------------LRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRP 316 (419)
T ss_dssp --------------------------TTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEE
T ss_pred --------------------------CCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCC
Confidence 4688888888877655 67899998864 46677889999999999999
Q ss_pred CcEEEEEeecccCCccC
Q psy889 149 GGRFLCLEFSHVNNSML 165 (167)
Q Consensus 149 gG~l~~~~~~~~~~~~~ 165 (167)
||+|++.++..+.++..
T Consensus 317 GGvlVi~Dl~tsy~p~f 333 (419)
T 3sso_A 317 GGLYVIEDMWTAYWPGF 333 (419)
T ss_dssp EEEEEEECGGGGGCTBT
T ss_pred CeEEEEEecccccCccc
Confidence 99999999886665443
No 162
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.44 E-value=1.5e-13 Score=103.94 Aligned_cols=103 Identities=15% Similarity=0.129 Sum_probs=82.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+ ++.+++++|+++.+++.+++++...+.
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~-----------~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 103 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQAL-----------PEATIVSIERDERRYEEAHKHVKALGL--------------------- 103 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHC-----------TTCEEEEECCCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCCcHHHHHHHHHC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 479999999999999999876 368899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCC--ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIE--SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~--~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|.... +.. ++.||+|++... ..+...+++++.++|+|||++++.++
T Consensus 104 -------------------~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 104 -------------------ESRIELLFGDALQLGEKLELYPLFDVLFIDAA---KGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp -------------------TTTEEEECSCGGGSHHHHTTSCCEEEEEEEGG---GSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred -------------------CCcEEEEECCHHHHHHhcccCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 13567777776553 222 467999988654 34678899999999999999999644
No 163
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.43 E-value=2.5e-14 Score=109.60 Aligned_cols=105 Identities=14% Similarity=0.065 Sum_probs=83.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.|+++++..+.
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~--------------------- 110 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALP----------DDGQVITCDINEGWTKHAHPYWREAKQ--------------------- 110 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSC----------TTCEEEEEECCCSSCCCSHHHHHHTTC---------------------
T ss_pred CEEEEeeCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999999773 378999999999999999999987664
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CC-----ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IE-----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~-----~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+..+|..+.. .. .++||+|++... ......++++++++|+|||++++
T Consensus 111 -------------------~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 111 -------------------EHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp -------------------TTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEE
Confidence 136777777765432 11 367999987542 45567789999999999999999
Q ss_pred Eeec
Q psy889 155 LEFS 158 (167)
Q Consensus 155 ~~~~ 158 (167)
-+..
T Consensus 169 d~~~ 172 (242)
T 3r3h_A 169 DNIF 172 (242)
T ss_dssp ECSS
T ss_pred ECCc
Confidence 5544
No 164
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.43 E-value=5.9e-13 Score=107.16 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=87.0
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|+|+|||+|..+..++++. +..+++..|. +.+++.++++......
T Consensus 182 ~v~DvGgG~G~~~~~l~~~~-----------p~~~~~~~dl-p~v~~~a~~~~~~~~~---------------------- 227 (353)
T 4a6d_A 182 LMCDLGGGAGALAKECMSLY-----------PGCKITVFDI-PEVVWTAKQHFSFQEE---------------------- 227 (353)
T ss_dssp EEEEETCTTSHHHHHHHHHC-----------SSCEEEEEEC-HHHHHHHHHHSCC--C----------------------
T ss_pred eEEeeCCCCCHHHHHHHHhC-----------CCceeEeccC-HHHHHHHHHhhhhccc----------------------
Confidence 79999999999999999988 4788999996 7799999887653332
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEeecc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
.++.+...|+...+. ..+|+|++..++|.+++. .++|+++++.|+|||++++.|..-
T Consensus 228 -------------------~rv~~~~gD~~~~~~--~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 228 -------------------EQIDFQEGDFFKDPL--PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp -------------------CSEEEEESCTTTSCC--CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred -------------------CceeeecCccccCCC--CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 578888888765443 347999999999988775 578999999999999999999765
Q ss_pred cCC
Q psy889 160 VNN 162 (167)
Q Consensus 160 ~~~ 162 (167)
++.
T Consensus 287 ~~~ 289 (353)
T 4a6d_A 287 DED 289 (353)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 165
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.43 E-value=7.2e-14 Score=100.14 Aligned_cols=103 Identities=10% Similarity=0.094 Sum_probs=74.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++....+.
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~-------------~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 88 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEG-------------WEAVLVEKDPEAVRLLKENVRRTGL--------------------- 88 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTT-------------CEEEEECCCHHHHHHHHHHHHHHTC---------------------
T ss_pred CeEEEeCCCcCHHHHHHHHCC-------------CeEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999998843 4499999999999999998875432
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CC---CccchhhHhhhhcccccccHHHHHHHHH--HhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PI---ESDSYSAYTIAFGIRNVTRIDKALSEAY--RVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~---~~~~~D~v~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~ 154 (167)
++.+...|..+. +. ...+||+|++...++ .....++..+. ++|+|||.+++
T Consensus 89 ---------------------~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 89 ---------------------GARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp ---------------------CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred ---------------------ceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEE
Confidence 345555555432 11 123689998876554 44556666666 99999999998
Q ss_pred Eeeccc
Q psy889 155 LEFSHV 160 (167)
Q Consensus 155 ~~~~~~ 160 (167)
......
T Consensus 146 ~~~~~~ 151 (171)
T 1ws6_A 146 QHPKDL 151 (171)
T ss_dssp EEETTS
T ss_pred EeCCcc
Confidence 665443
No 166
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.43 E-value=1.5e-13 Score=110.98 Aligned_cols=100 Identities=10% Similarity=0.045 Sum_probs=81.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++.
T Consensus 203 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~~--------------------------- 243 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAAHY-----------PTIKGVNFDL-PHVISEAPQF--------------------------- 243 (364)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTCEEEEEEC-HHHHTTCCCC---------------------------
T ss_pred CEEEEeCCCCCHHHHHHHHHC-----------CCCeEEEecC-HHHHHhhhhc---------------------------
Confidence 479999999999999999987 3778999999 7776655421
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|+.. +.+.+ |+|++..++|++++ ..++|+++++.|+|||++++.++.
T Consensus 244 --------------------~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 244 --------------------PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp --------------------TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred --------------------CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 467888888876 55443 99999999998755 568899999999999999999987
Q ss_pred ccCC
Q psy889 159 HVNN 162 (167)
Q Consensus 159 ~~~~ 162 (167)
.++.
T Consensus 301 ~~~~ 304 (364)
T 3p9c_A 301 LPVN 304 (364)
T ss_dssp BCSS
T ss_pred cCCC
Confidence 6653
No 167
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=3.2e-13 Score=105.11 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=82.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++... ..+++++|+++.+++.++++++..+.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~-----------~~~V~~vD~s~~av~~a~~n~~~n~l--------------------- 168 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK-----------PKLVYAIEKNPTAYHYLCENIKLNKL--------------------- 168 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC-----------CSEEEEEECCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCcCCHHHHHHHHhCC-----------CCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999998762 56899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
.++.+...|..+.+. ...||+|++... .....++.++.+.|+|||.+++.++...
T Consensus 169 --------------------~~~~~~~~d~~~~~~-~~~~D~Vi~d~p----~~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 169 --------------------NNVIPILADNRDVEL-KDVADRVIMGYV----HKTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp --------------------SSEEEEESCGGGCCC-TTCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred --------------------CCEEEEECChHHcCc-cCCceEEEECCc----ccHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 356677777766522 457888877542 2567788999999999999999887653
No 168
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.41 E-value=2.8e-13 Score=98.40 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=78.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+.
T Consensus 35 ~~vldiG~G~G~~~~~l~~~-------------~~~v~~~D~~~~~~~~a~~~~~~~~~--------------------- 80 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGR-------------VRRVYAIDRNPEAISTTEMNLQRHGL--------------------- 80 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCCCCHHHHHHHHh-------------cCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999998873 46799999999999999998875543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-cchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|... +... +.||+|++...+ .+...++++++++|+|||.+++....
T Consensus 81 -------------------~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 81 -------------------GDNVTLMEGDAPE-ALCKIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp -------------------CTTEEEEESCHHH-HHTTSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred -------------------CcceEEEecCHHH-hcccCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 1356666666544 1111 479999887654 35688999999999999999997654
No 169
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.41 E-value=9.2e-14 Score=118.35 Aligned_cols=107 Identities=11% Similarity=0.088 Sum_probs=87.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.||||+|||+|.++..+++ .+++++|+|.++.+++.|+.++...+.
T Consensus 68 ~~vLDvGCG~G~~~~~la~-------------~ga~V~giD~~~~~i~~a~~~a~~~~~--------------------- 113 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLAS-------------KGATIVGIDFQQENINVCRALAEENPD--------------------- 113 (569)
T ss_dssp CEEEEETCTTSHHHHHHHH-------------TTCEEEEEESCHHHHHHHHHHHHTSTT---------------------
T ss_pred CeEEEECCCCcHHHHHHHh-------------CCCEEEEECCCHHHHHHHHHHHHhcCC---------------------
Confidence 4899999999999999998 478999999999999999998875543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcccccccHHHH--HHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGIRNVTRIDKA--LSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~~~~~~~~~~--l~~~~~~LkpgG~l~~~~ 156 (167)
.++.|...+.+++ ...++.||+|+|..+++|+++...+ +..+++.|.++|..++..
T Consensus 114 --------------------~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 114 --------------------FAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp --------------------SEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred --------------------CceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 3688888888776 3556789999999999999876533 456788888888777766
Q ss_pred ecccC
Q psy889 157 FSHVN 161 (167)
Q Consensus 157 ~~~~~ 161 (167)
+...+
T Consensus 174 ~~~~e 178 (569)
T 4azs_A 174 LAVKE 178 (569)
T ss_dssp CCCTT
T ss_pred ecccc
Confidence 65544
No 170
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.41 E-value=6.4e-13 Score=106.80 Aligned_cols=107 Identities=22% Similarity=0.181 Sum_probs=77.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++.... +..+++|+|+++.+++.|++++...+.
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~----------~~~~v~g~Di~~~~i~~a~~n~~~~g~--------------------- 253 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLG----------PTSPVYAGDLDEKRLGLAREAALASGL--------------------- 253 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHC----------TTSCEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEeCCCCcCHHHHHHHHhhC----------CCceEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999998762 257899999999999999999987765
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc--------ccccHHHHHHHHHHhcCCCcEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR--------NVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~--------~~~~~~~~l~~~~~~LkpgG~l 152 (167)
.++.+...|..+++.....||+|+++-.+. .......+++++.++|+|||.+
T Consensus 254 --------------------~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l 313 (354)
T 3tma_A 254 --------------------SWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRV 313 (354)
T ss_dssp --------------------TTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEE
T ss_pred --------------------CceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEE
Confidence 234555555555444334456655532211 1122367889999999999999
Q ss_pred EEEeec
Q psy889 153 LCLEFS 158 (167)
Q Consensus 153 ~~~~~~ 158 (167)
++....
T Consensus 314 ~i~t~~ 319 (354)
T 3tma_A 314 ALLTLR 319 (354)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 997654
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.41 E-value=2.3e-13 Score=104.77 Aligned_cols=101 Identities=19% Similarity=0.108 Sum_probs=77.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~-------------g~~v~gvDi~~~~v~~a~~n~~~~~~--------------------- 167 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKL-------------GGKALGVDIDPMVLPQAEANAKRNGV--------------------- 167 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCGGGHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCCCcHHHHHHHHh-------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 47999999999999988773 34899999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
. +.+...+.... +..++||+|+++...+ .+..++.++.++|+|||++++..+...
T Consensus 168 --------------------~-v~~~~~d~~~~-~~~~~fD~Vv~n~~~~---~~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 168 --------------------R-PRFLEGSLEAA-LPFGPFDLLVANLYAE---LHAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp --------------------C-CEEEESCHHHH-GGGCCEEEEEEECCHH---HHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred --------------------c-EEEEECChhhc-CcCCCCCEEEECCcHH---HHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 2 55555555432 2346799998864322 357889999999999999999776543
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.41 E-value=4e-13 Score=101.01 Aligned_cols=110 Identities=7% Similarity=0.002 Sum_probs=79.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++...... .+..+++++|+++.+++.+++++...+.....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~----------------- 138 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLE------NKNSYVIGLERVKDLVNFSLENIKRDKPELLK----------------- 138 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTT------CTTCEEEEEESCHHHHHHHHHHHHHHCGGGGS-----------------
T ss_pred CEEEEECCCCCHHHHHHHHHhcccC------CCCCEEEEEeCCHHHHHHHHHHHHHcCccccc-----------------
Confidence 4799999999999999988652000 01368999999999999999998765410000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC----CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..++.+...|..... ...++||+|++...++++ +++++++|+|||++++..
T Consensus 139 -------------------~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 139 -------------------IDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPI 193 (227)
T ss_dssp -------------------STTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEE
T ss_pred -------------------cCCEEEEECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEE
Confidence 035777777776543 345679999887766543 478899999999999865
Q ss_pred ec
Q psy889 157 FS 158 (167)
Q Consensus 157 ~~ 158 (167)
..
T Consensus 194 ~~ 195 (227)
T 2pbf_A 194 EE 195 (227)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 173
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.40 E-value=2.6e-13 Score=102.18 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=76.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~----------------------- 115 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEI-------------VDKVVSVEINEKMYNYASKLLSYY----------------------- 115 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHTTC-----------------------
T ss_pred CEEEEEcCCCCHHHHHHHHH-------------cCEEEEEeCCHHHHHHHHHHHhhc-----------------------
Confidence 47999999999999999874 467999999999999999887532
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|........++||+|++..+++++. .+++++|+|||++++....
T Consensus 116 --------------------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 116 --------------------NNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp --------------------SSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred --------------------CCeEEEECCcccccccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcC
Confidence 146666666655222356799999988887765 3689999999999997643
No 174
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=2.4e-13 Score=105.76 Aligned_cols=126 Identities=11% Similarity=0.040 Sum_probs=80.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~- 79 (167)
.+|||+|||+|..+..+++... ...+++++|+++.+++.++++++..+. .++++..+|+..++.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~----------~~~~v~avD~~~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMK----------NKGTIVAVEISKTRTKALKSNINRMGV-----LNTIIINADMRKYKDY 149 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTT----------TCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCHHHHHHH
T ss_pred CEEEEeCCCccHHHHHHHHHcC----------CCCEEEEECCCHHHHHHHHHHHHHhCC-----CcEEEEeCChHhcchh
Confidence 4799999999999999998763 137899999999999999999887654 245566666555442
Q ss_pred ---CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 80 ---ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 80 ---~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..+.||.+.+..+.+....... + + ....+ ...........++++++++|||||++++.+
T Consensus 150 ~~~~~~~fD~Vl~d~Pcs~~g~~~~-------~----p--~~~~~-----~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 150 LLKNEIFFDKILLDAPCSGNIIKDK-------N----R--NVSEE-----DIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp HHHTTCCEEEEEEEECCC-------------------------HH-----HHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccccCCEEEEcCCCCCCccccc-------C----C--CCCHH-----HHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 2445555555433322110000 0 0 00000 001122456789999999999999999976
Q ss_pred ecc
Q psy889 157 FSH 159 (167)
Q Consensus 157 ~~~ 159 (167)
++.
T Consensus 212 cs~ 214 (274)
T 3ajd_A 212 CSM 214 (274)
T ss_dssp SCC
T ss_pred CCC
Confidence 543
No 175
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.40 E-value=6.7e-13 Score=100.63 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=77.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +.+++++|+++.+++.+++++...+.
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 139 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIV------------KTDVYTIERIPELVEFAKRNLERAGV--------------------- 139 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHH------------CSCEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeCCcCHHHHHHHHHh------------CCEEEEEeCCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999999876 26799999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-cchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|. ..++.. ..||+|++..+++++. .+++++|+|||.+++..-.
T Consensus 140 --------------------~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 140 --------------------KNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp --------------------CSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred --------------------CCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEec
Confidence 3566777765 223333 3499999988776655 3789999999999996543
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.40 E-value=1.1e-12 Score=102.42 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=77.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHHh-----cccCCCCCCccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARD-----LFKVPVPNPRLRFLEANA 74 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~d~ 74 (167)
.+|||+|||+|.++..++... ..+++++|+ ++.+++.++++... .+..
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~-------------- 134 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAG------------ADQVVATDYPDPEILNSLESNIREHTANSCSSE-------------- 134 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTT------------CSEEEEEECSCHHHHHHHHHHHHTTCC--------------------
T ss_pred CeEEEecccccHHHHHHHHcC------------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc--------------
Confidence 379999999999999887732 348999999 89999999998832 1110
Q ss_pred ccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCC--C----CccchhhHhhhhcccccccHHHHHHHHHHhcC-
Q psy889 75 EELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--I----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLK- 147 (167)
Q Consensus 75 ~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~----~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~Lk- 147 (167)
.....++.+...+..+.. . ..+.||+|++..++++.++...+++.+.++|+
T Consensus 135 ----------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~ 192 (281)
T 3bzb_A 135 ----------------------TVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLAL 192 (281)
T ss_dssp --------------------------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCC
T ss_pred ----------------------cCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcc
Confidence 000023555443332211 1 24679999998888888999999999999999
Q ss_pred --C--CcEEEEE
Q psy889 148 --P--GGRFLCL 155 (167)
Q Consensus 148 --p--gG~l~~~ 155 (167)
| ||.++++
T Consensus 193 ~~p~~gG~l~v~ 204 (281)
T 3bzb_A 193 PANDPTAVALVT 204 (281)
T ss_dssp TTTCTTCEEEEE
T ss_pred cCCCCCCEEEEE
Confidence 9 9987764
No 177
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.40 E-value=6.3e-13 Score=96.31 Aligned_cols=94 Identities=14% Similarity=0.033 Sum_probs=67.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++ .+ +++|+|+|+.+++. .
T Consensus 25 ~~vLD~GcG~G~~~~~l~~-------------~~-~v~gvD~s~~~~~~---------~--------------------- 60 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRK-------------RN-TVVSTDLNIRALES---------H--------------------- 60 (170)
T ss_dssp CEEEEETCTTCHHHHHHTT-------------TS-EEEEEESCHHHHHT---------C---------------------
T ss_pred CeEEEeccCccHHHHHHHh-------------cC-cEEEEECCHHHHhc---------c---------------------
Confidence 3799999999999999887 35 89999999999887 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc---------cHHHHHHHHHHhcCCCcE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT---------RIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~---------~~~~~l~~~~~~LkpgG~ 151 (167)
.++.+...|... +..+++||+|+++..+++.+ +...++.++.+.+ |||.
T Consensus 61 --------------------~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~ 118 (170)
T 3q87_B 61 --------------------RGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGM 118 (170)
T ss_dssp --------------------SSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSE
T ss_pred --------------------cCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCE
Confidence 234455555544 33345666666655544332 2356788888888 9999
Q ss_pred EEEEeeccc
Q psy889 152 FLCLEFSHV 160 (167)
Q Consensus 152 l~~~~~~~~ 160 (167)
+++.+....
T Consensus 119 l~~~~~~~~ 127 (170)
T 3q87_B 119 LYLLVIEAN 127 (170)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEecCC
Confidence 999776543
No 178
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.39 E-value=1.3e-12 Score=98.25 Aligned_cols=99 Identities=11% Similarity=0.018 Sum_probs=74.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.++++....
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~~~~~~~~~----------------------- 121 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVG----------WEGKIFGIEFSPRVLRELVPIVEER----------------------- 121 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHSSC-----------------------
T ss_pred CEEEEEeccCCHHHHHHHHHhC----------CCeEEEEEECCHHHHHHHHHHHhcc-----------------------
Confidence 4799999999999999998863 2578999999999999998876532
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC---CCccchhhHhhhhcccccccH-HHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP---IESDSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|..... ....+||+|++... .++. ..++.+++++|||||++++.
T Consensus 122 --------------------~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 122 --------------------RNIVPILGDATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp --------------------TTEEEEECCTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------CCCEEEEccCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 24666666665421 12347999986543 2333 34599999999999999997
No 179
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.39 E-value=4.3e-13 Score=101.11 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=78.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc-----cCCCCCCcccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF-----KVPVPNPRLRFLEANAE 75 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~d~~ 75 (167)
.+|||+|||+|..+..+++....... ....+++++|+++.+++.+++++...+ .
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~-----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---------------- 144 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGV-----DADTRIVGIEHQAELVRRSKANLNTDDRSMLDS---------------- 144 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCC-----CTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH----------------
T ss_pred CEEEEECCCccHHHHHHHHhcccccC-----CccCEEEEEEcCHHHHHHHHHHHHhcCccccCC----------------
Confidence 47999999999999999886630000 002589999999999999999886543 2
Q ss_pred cCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCc-cchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 76 ELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIES-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 76 ~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.++.+...|... ++.. +.||+|++...++++. ++++++|||||++++
T Consensus 145 -------------------------~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 145 -------------------------GQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIV 192 (227)
T ss_dssp -------------------------TSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEE
T ss_pred -------------------------CceEEEECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEE
Confidence 357777777665 3333 6799999887766544 678999999999998
Q ss_pred Eee
Q psy889 155 LEF 157 (167)
Q Consensus 155 ~~~ 157 (167)
...
T Consensus 193 ~~~ 195 (227)
T 1r18_A 193 PVG 195 (227)
T ss_dssp EES
T ss_pred EEe
Confidence 653
No 180
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.39 E-value=3.2e-13 Score=96.61 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=75.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.+. .+.+++++|+++ +++.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~----------~~~~v~~~D~~~-~~~~------------------------------- 61 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIG----------GKGRIIACDLLP-MDPI------------------------------- 61 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHC----------TTCEEEEEESSC-CCCC-------------------------------
T ss_pred CeEEEeCCCCCHHHHHHHHHhC----------CCCeEEEEECcc-cccc-------------------------------
Confidence 3799999999999999998863 357899999998 6421
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC--------CCccchhhHhhhhcccccccH-----------HHHHHH
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP--------IESDSYSAYTIAFGIRNVTRI-----------DKALSE 141 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~~~D~v~~~~~~~~~~~~-----------~~~l~~ 141 (167)
.++.+...|....+ ..+++||+|++...+++.... ..++++
T Consensus 62 --------------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (180)
T 1ej0_A 62 --------------------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEM 121 (180)
T ss_dssp --------------------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHH
Confidence 23555666665544 445679999887766655443 688999
Q ss_pred HHHhcCCCcEEEEEeecccC
Q psy889 142 AYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 142 ~~~~LkpgG~l~~~~~~~~~ 161 (167)
++++|+|||.+++..+....
T Consensus 122 ~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 122 CRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp HHHHEEEEEEEEEEEESSTT
T ss_pred HHHHcCCCcEEEEEEecCCc
Confidence 99999999999997765543
No 181
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.39 E-value=2.9e-13 Score=103.95 Aligned_cols=103 Identities=14% Similarity=0.090 Sum_probs=80.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++..+. .+.+++++|+++.+++.+++++...+.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~----------~~~~v~~iD~s~~~~~~a~~~~~~~g~--------------------- 129 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIP----------EDGKILAMDINKENYELGLPVIKKAGV--------------------- 129 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSC----------TTCEEEEEESCCHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999999873 368999999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C-C-----CccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P-I-----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
..++.+...+..+. + . ..++||+|++... ..+...++++++++|+|||+++
T Consensus 130 -------------------~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv 187 (247)
T 1sui_A 130 -------------------DHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIG 187 (247)
T ss_dssp -------------------GGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEE
T ss_pred -------------------CCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEE
Confidence 13566666665432 2 1 1467899887532 3456788999999999999999
Q ss_pred EEe
Q psy889 154 CLE 156 (167)
Q Consensus 154 ~~~ 156 (167)
+-+
T Consensus 188 ~d~ 190 (247)
T 1sui_A 188 YDN 190 (247)
T ss_dssp EEC
T ss_pred Eec
Confidence 844
No 182
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.39 E-value=1.3e-12 Score=108.39 Aligned_cols=114 Identities=16% Similarity=0.173 Sum_probs=77.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
.+|||+|||+|..+..++..+. ...+++++|+++.+++.+++++...+. .++++..+|+..++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~----------~~~~v~a~D~s~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMK----------NKGKIYAFDVDKMRMKRLKDFVKRMGI-----KIVKPLVKDARKAPEI 325 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCTTCCSSS
T ss_pred CEEEEeCCCccHHHHHHHHHcC----------CCCEEEEEcCCHHHHHHHHHHHHHcCC-----CcEEEEEcChhhcchh
Confidence 4799999999999999999873 137899999999999999999987664 13444555544443
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc----------------HHHHHHHH
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR----------------IDKALSEA 142 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~----------------~~~~l~~~ 142 (167)
++.+.||.+.+..+-+. ..+++..++ ...++.++
T Consensus 326 ~~~~~fD~Vl~D~Pcsg------------------------------~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a 375 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTS------------------------------SGTIGKNPELRWRLREDKINEMSQLQRELLESA 375 (450)
T ss_dssp SCSSCEEEEEEECCCCC------------------------------GGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHH
T ss_pred hccCCCCEEEEcCCCCC------------------------------CeeeccChhhhhhCCHHHHHHHHHHHHHHHHHH
Confidence 33334443333222211 111111111 26789999
Q ss_pred HHhcCCCcEEEEEeecc
Q psy889 143 YRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 143 ~~~LkpgG~l~~~~~~~ 159 (167)
.++|||||.+++++++.
T Consensus 376 ~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 376 ARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp HTTEEEEEEEEEEESCC
T ss_pred HHhcCCCcEEEEEeCCC
Confidence 99999999999977653
No 183
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.39 E-value=8e-13 Score=102.61 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=80.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++...+.
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 162 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVG----------SSGKVFAYEKREEFAKLAESNLTKWGL--------------------- 162 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTT----------TTCEEEEECCCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEECCcCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999998753 367899999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..++.+...|..+. +..+.||+|++. .++...+++++.++|+|||.+++.+.+
T Consensus 163 -------------------~~~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 163 -------------------IERVTIKVRDISEG-FDEKDVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp -------------------GGGEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred -------------------CCCEEEEECCHHHc-ccCCccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 03466666666554 444679998873 466778999999999999999997643
No 184
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.37 E-value=8.9e-13 Score=105.12 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=76.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc----cCCCCCCccccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF----KVPVPNPRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~d~~~ 76 (167)
.+|||+|||+|.++..+++... +..+++++|+++.+++.|++++...+ .+..
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~-------------- 162 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVG----------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHV-------------- 162 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCS--------------
T ss_pred CEEEEeCCCcCHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccc--------------
Confidence 4799999999999999998763 35889999999999999999987532 1000
Q ss_pred CCCCCCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 77 LPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 77 l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.....++.+...|..+. ++.+++||+|++.. +....++.+++++|+|||.|++
T Consensus 163 --------------------~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 163 --------------------EEWPDNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp --------------------SCCCCCEEEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEE
T ss_pred --------------------cccCCceEEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEE
Confidence 00013567777777664 34456799998742 3344588999999999999998
Q ss_pred Eeec
Q psy889 155 LEFS 158 (167)
Q Consensus 155 ~~~~ 158 (167)
...+
T Consensus 218 ~~~~ 221 (336)
T 2b25_A 218 YVVN 221 (336)
T ss_dssp EESS
T ss_pred EeCC
Confidence 6643
No 185
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=9.8e-13 Score=109.97 Aligned_cols=129 Identities=8% Similarity=0.099 Sum_probs=80.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~- 79 (167)
.+|||+|||+|..+..++..+. ...+++++|+++.+++.++++++..+. .++++..+|+..++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~----------~~g~V~avDis~~~l~~~~~n~~r~g~-----~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMN----------NEGAILANEFSASRVKVLHANISRCGI-----SNVALTHFDGRVFGAA 183 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTT----------TCSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCCSTTHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCCHHHhhhh
Confidence 4799999999999999999874 257899999999999999999987765 235555566555442
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..+.||.+++..+-+.... + .-+. +.......-++. ........++.+++++|||||+|++++++
T Consensus 184 ~~~~fD~Il~D~PcSg~G~------~-~~~p-d~~~~~~~~~~~------~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGV------V-RKDP-DALKNWSPESNQ------EIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp STTCEEEEEEECCCCCGGG------G-GTCT-TSSSSCCHHHHH------HHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccccCCEEEECCCcCCccc------c-cCCH-HHHhhcCHhHHH------HHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 3345555555433321100 0 0000 000000000000 00112357899999999999999997764
No 186
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.37 E-value=3.2e-12 Score=103.60 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=79.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+| |+|.++..++... ...+++++|+++.+++.++++++..+.
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~-----------~~~~v~~vDi~~~~l~~a~~~~~~~g~--------------------- 220 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSG-----------LPKRIAVLDIDERLTKFIEKAANEIGY--------------------- 220 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHT-----------CCSEEEEECSCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEEC-CCCHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999 9999999998754 247899999999999999999887654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCC-CccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPI-ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
.++.+...|... ++. .+++||+|+++..++.. ....++++++++|+|||.+++.+++
T Consensus 221 --------------------~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 221 --------------------EDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp --------------------CCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred --------------------CCEEEEEChhhhhchhhccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 357777777766 443 34578888886544322 3578899999999999965444544
Q ss_pred c
Q psy889 159 H 159 (167)
Q Consensus 159 ~ 159 (167)
.
T Consensus 280 ~ 280 (373)
T 2qm3_A 280 R 280 (373)
T ss_dssp T
T ss_pred c
Confidence 3
No 187
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=7.4e-13 Score=100.49 Aligned_cols=106 Identities=11% Similarity=0.060 Sum_probs=80.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.|++++...+.
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~--------------------- 122 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLP----------PDGQIIACDQDPNATAIAKKYWQKAGV--------------------- 122 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEecCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999998763 267899999999999999998876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC----CCCCc--cchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE----LPIES--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~--~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...+..+ ++..+ ++||+|++... ..+...+++++.++|+|||++++
T Consensus 123 -------------------~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 123 -------------------AEKISLRLGPALATLEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp -------------------GGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred -------------------CCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEE
Confidence 1346666666432 22222 67999987542 35667889999999999999998
Q ss_pred Eeecc
Q psy889 155 LEFSH 159 (167)
Q Consensus 155 ~~~~~ 159 (167)
.+...
T Consensus 181 ~~~~~ 185 (232)
T 3cbg_A 181 DNVLW 185 (232)
T ss_dssp ECTTG
T ss_pred eCCCc
Confidence 65443
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.36 E-value=7.5e-13 Score=97.55 Aligned_cols=114 Identities=11% Similarity=0.160 Sum_probs=69.0
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCC-CCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
+|||+|||+|.++..+++.+. . ..+++|+|+|+.. ..+++++..+|+.+.+..
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~----------~~~~~v~gvD~s~~~----------------~~~~v~~~~~d~~~~~~~ 78 (201)
T 2plw_A 25 IILDIGCYPGSWCQVILERTK----------NYKNKIIGIDKKIMD----------------PIPNVYFIQGEIGKDNMN 78 (201)
T ss_dssp EEEEESCTTCHHHHHHHHHTT----------TSCEEEEEEESSCCC----------------CCTTCEEEECCTTTTSSC
T ss_pred EEEEeCCCCCHHHHHHHHHcC----------CCCceEEEEeCCccC----------------CCCCceEEEccccchhhh
Confidence 799999999999999998762 1 4789999999831 012455556665543210
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecc-cC----CC--CCCccchhhHhhhhccccc----ccH-------HHHHHHH
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEAN-AE----EL--PIESDSYSAYTIAFGIRNV----TRI-------DKALSEA 142 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d-~~----~~--~~~~~~~D~v~~~~~~~~~----~~~-------~~~l~~~ 142 (167)
... +..+.... .. .+ .+...+||+|++...+++. .+. ..+++++
T Consensus 79 --~~~----------------~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~ 140 (201)
T 2plw_A 79 --NIK----------------NINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFM 140 (201)
T ss_dssp --CC---------------------------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred --hhc----------------cccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHH
Confidence 000 00000000 00 00 0234578999886655542 222 3478999
Q ss_pred HHhcCCCcEEEEEeecc
Q psy889 143 YRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 143 ~~~LkpgG~l~~~~~~~ 159 (167)
+++|||||.|++..+..
T Consensus 141 ~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 141 EQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHEEEEEEEEEEEECS
T ss_pred HHHccCCCEEEEEEeCC
Confidence 99999999999866553
No 189
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.36 E-value=6.2e-13 Score=101.08 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=79.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.+++++...+.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~--------------------- 110 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALP----------EDGKILCCDVSEEWTNVARKYWKENGL--------------------- 110 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSC----------TTCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEeCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999998763 267999999999999999999876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C--------------CCc--cchhhHhhhhcccccccHHHHHHHHH
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P--------------IES--DSYSAYTIAFGIRNVTRIDKALSEAY 143 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--------------~~~--~~~D~v~~~~~~~~~~~~~~~l~~~~ 143 (167)
..++.+...|.... + +.. ++||+|++... ......++++++
T Consensus 111 -------------------~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~ 168 (239)
T 2hnk_A 111 -------------------ENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLIL 168 (239)
T ss_dssp -------------------GGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHH
T ss_pred -------------------CCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHH
Confidence 02355555543321 1 222 67999987643 455678899999
Q ss_pred HhcCCCcEEEEEeec
Q psy889 144 RVLKPGGRFLCLEFS 158 (167)
Q Consensus 144 ~~LkpgG~l~~~~~~ 158 (167)
++|+|||++++.+..
T Consensus 169 ~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 169 KLLKPGGLLIADNVL 183 (239)
T ss_dssp HHEEEEEEEEEECSS
T ss_pred HHcCCCeEEEEEccc
Confidence 999999999996543
No 190
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.36 E-value=6.3e-13 Score=106.83 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=81.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. +..+++++|+ +.+++.+++ .
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~-----------p~~~~~~~D~-~~~~~~a~~------~--------------------- 235 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIF-----------PHLKCTVFDQ-PQVVGNLTG------N--------------------- 235 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHC-----------TTSEEEEEEC-HHHHSSCCC------C---------------------
T ss_pred CEEEEECCCcCHHHHHHHHHC-----------CCCeEEEecc-HHHHhhccc------C---------------------
Confidence 379999999999999999987 3678999998 677755442 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHH--HHHHHHHHhcCC---CcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKP---GGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~--~~l~~~~~~Lkp---gG~l~~~ 155 (167)
.++.+...|+.. +.+ .||+|++..++|++++.. +++++++++|+| ||++++.
T Consensus 236 --------------------~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 236 --------------------ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp --------------------SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred --------------------CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 247777777765 443 499999999999998866 999999999999 9999999
Q ss_pred eecccCC
Q psy889 156 EFSHVNN 162 (167)
Q Consensus 156 ~~~~~~~ 162 (167)
++..++.
T Consensus 293 e~~~~~~ 299 (358)
T 1zg3_A 293 DISIDET 299 (358)
T ss_dssp ECEECTT
T ss_pred EeccCCC
Confidence 8876543
No 191
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.36 E-value=4.9e-13 Score=105.64 Aligned_cols=108 Identities=15% Similarity=0.170 Sum_probs=76.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.+++++...... ..
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~----------------- 147 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHG-----------TVEHCDLVDIDGEVMEQSKQHFPQISRS-LA----------------- 147 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCT-----------TCCEEEEEESCHHHHHHHHHHCHHHHGG-GG-----------------
T ss_pred CeEEEEcCCCCHHHHHHHhCC-----------CCCEEEEEECCHHHHHHHHHHhHHhhcc-cC-----------------
Confidence 379999999999999998764 2678999999999999999887421100 00
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCC--CccchhhHhhhhcccccccH----HHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPI--ESDSYSAYTIAFGIRNVTRI----DKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D~v~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...|...... .+++||+|++.......+.. ..++++++++|+|||++++
T Consensus 148 -------------------~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 208 (304)
T 3bwc_A 148 -------------------DPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCN 208 (304)
T ss_dssp -------------------CTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1456666666654332 35678888885443332221 6789999999999999998
Q ss_pred Ee
Q psy889 155 LE 156 (167)
Q Consensus 155 ~~ 156 (167)
..
T Consensus 209 ~~ 210 (304)
T 3bwc_A 209 QG 210 (304)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 192
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.36 E-value=3.8e-12 Score=96.58 Aligned_cols=99 Identities=11% Similarity=0.091 Sum_probs=78.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+.
T Consensus 93 ~~vldiG~G~G~~~~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~--------------------- 138 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV-------------AGEVWTFEAVEEFYKTAQKNLKKFNL--------------------- 138 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEECSCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCccHHHHHHHHh-------------CCEEEEEecCHHHHHHHHHHHHHcCC---------------------
Confidence 37999999999999999885 36799999999999999998876543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+.......||+|++. .++...+++++.++|+|||.+++...
T Consensus 139 -------------------~~~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 139 -------------------GKNVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp -------------------CTTEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred -------------------CCcEEEEEcChhhcccCCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 135666666665543244679998862 45667889999999999999999664
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.36 E-value=1.4e-12 Score=104.81 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=79.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+|+ +++.++++++..+.
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g------------~~~V~~vD~s~-~~~~a~~~~~~~~l--------------------- 97 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAG------------ARKIYAVEAST-MAQHAEVLVKSNNL--------------------- 97 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------CSEEEEEECST-HHHHHHHHHHHTTC---------------------
T ss_pred CEEEEcCCCccHHHHHHHhCC------------CCEEEEECCHH-HHHHHHHHHHHcCC---------------------
Confidence 479999999999999988742 46899999996 88999888875543
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...+.++++.. ++||+|++....+++ ......+.+++++|||||.+++
T Consensus 98 -------------------~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 98 -------------------TDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp -------------------TTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred -------------------CCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 14678888888776544 579999997665544 3466788899999999999985
No 194
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=9.1e-13 Score=104.71 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=78.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++.. ++.+++++|+++.+++.+++++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-----------p~~~v~~VEidp~vi~~Ar~~~~~~~---------------------- 137 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-----------PQSRNTVVELDAELARLSREWFDIPR---------------------- 137 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-----------TTCEEEEEESCHHHHHHHHHHSCCCC----------------------
T ss_pred CEEEEEECCcCHHHHHHHHHC-----------CCcEEEEEECCHHHHHHHHHhccccC----------------------
Confidence 489999999999999999876 36789999999999999998764211
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcccc-ccc---HHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGIRN-VTR---IDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~~~-~~~---~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.++..|.... ....++||+|++...... .+. ...++++++++|+|||+|++
T Consensus 138 -------------------~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 138 -------------------APRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp -------------------TTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 14566666665443 123467888877432221 111 26789999999999999998
Q ss_pred Eeecc
Q psy889 155 LEFSH 159 (167)
Q Consensus 155 ~~~~~ 159 (167)
...+.
T Consensus 199 ~~~~~ 203 (317)
T 3gjy_A 199 NCGDH 203 (317)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 66543
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.35 E-value=3.5e-12 Score=97.32 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=70.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|..+..+++... +.++++++|+++.+++...+.....
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~----------~~G~V~avD~s~~~l~~l~~~a~~r----------------------- 124 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIE----------LNGKAYGVEFSPRVVRELLLVAQRR----------------------- 124 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHT----------TTSEEEEEECCHHHHHHHHHHHHHC-----------------------
T ss_pred CEEEEEeecCCHHHHHHHHHhC----------CCCEEEEEECcHHHHHHHHHHhhhc-----------------------
Confidence 5899999999999999999875 4679999999999976554443321
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC---CCccchhhHhhhhcccccccHHHHH-HHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP---IESDSYSAYTIAFGIRNVTRIDKAL-SEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~ 155 (167)
.++.++..|..... ....+||+|++.... ++...++ ..+.++|||||+|++.
T Consensus 125 --------------------~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 125 --------------------PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --------------------TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 24556666654321 123579999876432 4555554 4566699999999986
No 196
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.35 E-value=1.4e-12 Score=102.76 Aligned_cols=109 Identities=13% Similarity=0.133 Sum_probs=74.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.|++++..........
T Consensus 85 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~---------------- 137 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTRHK-----------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDD---------------- 137 (294)
T ss_dssp CEEEEESCTTCHHHHHHHTCT-----------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTC----------------
T ss_pred CEEEEEeCChhHHHHHHHhCC-----------CCCEEEEEECCHHHHHHHHHhhhhcccccccC----------------
Confidence 379999999999999999865 36789999999999999999876432100011
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhccccccc----HHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRNVTR----IDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|.... ....++||+|++.......+. ...++++++++|+|||++++.
T Consensus 138 --------------------~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 138 --------------------PRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp --------------------TTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred --------------------CceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 3455555555442 223466888877433221111 167889999999999999985
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 198 ~ 198 (294)
T 3adn_A 198 N 198 (294)
T ss_dssp E
T ss_pred c
Confidence 4
No 197
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.35 E-value=9.4e-13 Score=105.34 Aligned_cols=110 Identities=12% Similarity=0.061 Sum_probs=73.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++.. +.+++++|+|+.+++.+++++...+. ...++++..+|+......
T Consensus 156 ~VLDlgcGtG~~sl~la~~-------------ga~V~~VD~s~~al~~a~~n~~~~gl---~~~~v~~i~~D~~~~l~~- 218 (332)
T 2igt_A 156 KVLNLFGYTGVASLVAAAA-------------GAEVTHVDASKKAIGWAKENQVLAGL---EQAPIRWICEDAMKFIQR- 218 (332)
T ss_dssp EEEEETCTTCHHHHHHHHT-------------TCEEEEECSCHHHHHHHHHHHHHHTC---TTSCEEEECSCHHHHHHH-
T ss_pred cEEEcccccCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECcHHHHHHH-
Confidence 7999999999999999873 45899999999999999999876554 111234444443332100
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh----------cccccccHHHHHHHHHHhcCCCcE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF----------GIRNVTRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~----------~~~~~~~~~~~l~~~~~~LkpgG~ 151 (167)
.......||+|++.- .++...+...++.++.++|+|||.
T Consensus 219 -------------------------------~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ 267 (332)
T 2igt_A 219 -------------------------------EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKAL 267 (332)
T ss_dssp -------------------------------HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCC
T ss_pred -------------------------------HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcE
Confidence 000023455555421 122345677899999999999999
Q ss_pred EEEEeecc
Q psy889 152 FLCLEFSH 159 (167)
Q Consensus 152 l~~~~~~~ 159 (167)
+++...+.
T Consensus 268 lli~~~~~ 275 (332)
T 2igt_A 268 GLVLTAYS 275 (332)
T ss_dssp EEEEEECC
T ss_pred EEEEECCC
Confidence 87755443
No 198
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.34 E-value=8.6e-13 Score=100.54 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=79.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. .+.+++++|+++.+++.++++++..+.
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~--------------------- 120 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIP----------DDGKITAIDFDREAYEIGLPFIRKAGV--------------------- 120 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSC----------TTCEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 4799999999999999999874 368999999999999999999876654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C-C-----CccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P-I-----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
..++.+...|..+. + . ..++||+|++.. .......+++++.++|+|||+++
T Consensus 121 -------------------~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~pGG~lv 178 (237)
T 3c3y_A 121 -------------------EHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVKVGGIVA 178 (237)
T ss_dssp -------------------GGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------CCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcCCCeEEE
Confidence 13466666665432 1 1 146789988643 24456788999999999999998
Q ss_pred EEe
Q psy889 154 CLE 156 (167)
Q Consensus 154 ~~~ 156 (167)
+-.
T Consensus 179 ~d~ 181 (237)
T 3c3y_A 179 YDN 181 (237)
T ss_dssp EEC
T ss_pred Eec
Confidence 854
No 199
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=8.1e-13 Score=100.78 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=73.8
Q ss_pred CeEEeeecCCCchHHHHHHh---hccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC
Q psy889 1 MYILFYLVFPGDIAFRFLNY---VDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l 77 (167)
.+|||+|||+|..+..+++. +. +..+++++|+++.+++.|+. ..
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~----------~~~~V~gvD~s~~~l~~a~~----~~------------------- 129 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMG----------IDCQVIGIDRDLSRCQIPAS----DM------------------- 129 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTT----------CCCEEEEEESCCTTCCCCGG----GC-------------------
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcC----------CCCEEEEEeCChHHHHHHhc----cC-------------------
Confidence 47999999999999999887 22 36899999999999887761 11
Q ss_pred CCCCCCCceeeeeeccccccCCCCceEEeecccCCC---CCCc-cchhhHhhhhcccccccHHHHHHHHHH-hcCCCcEE
Q psy889 78 PIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL---PIES-DSYSAYTIAFGIRNVTRIDKALSEAYR-VLKPGGRF 152 (167)
Q Consensus 78 ~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~-~LkpgG~l 152 (167)
.++.++.+|..+. +... .+||+|++... + .+...++.++++ +|||||+|
T Consensus 130 -----------------------~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~l 183 (236)
T 2bm8_A 130 -----------------------ENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYF 183 (236)
T ss_dssp -----------------------TTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEE
T ss_pred -----------------------CceEEEECcchhHHHHHhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEE
Confidence 3566777766653 3222 36899887543 2 367789999997 99999999
Q ss_pred EEEee
Q psy889 153 LCLEF 157 (167)
Q Consensus 153 ~~~~~ 157 (167)
++.++
T Consensus 184 v~~d~ 188 (236)
T 2bm8_A 184 IIEDM 188 (236)
T ss_dssp EECSC
T ss_pred EEEeC
Confidence 99654
No 200
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.34 E-value=2.7e-12 Score=100.49 Aligned_cols=124 Identities=10% Similarity=0.021 Sum_probs=75.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++.. . ..+++++|+|+.+++.|+++....+. .+++++..+|.... ++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~-~-----------~~~v~~vDis~~al~~A~~n~~~~~l----~~~v~~~~~D~~~~-~~ 187 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF-S-----------DAIVFATDVSSKAVEIARKNAERHGV----SDRFFVRKGEFLEP-FK 187 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH-S-----------SCEEEEEESCHHHHHHHHHHHHHTTC----TTSEEEEESSTTGG-GG
T ss_pred CEEEEEeCchhHHHHHHHHC-C-----------CCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECcchhh-cc
Confidence 37999999999999999986 4 68899999999999999999887654 12355555555441 11
Q ss_pred CCCC---ceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHH-HhcCCCcEEEEEe
Q psy889 81 SDSY---SAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY-RVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~f---d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~ 156 (167)
+.| |.+++.++...... ... ..+.. .....+. .-.+...+++++. +.|+|||.+++ +
T Consensus 188 -~~f~~~D~IvsnPPyi~~~~--------~l~-~~v~~---ep~~al~-----~~~dgl~~~~~i~~~~l~pgG~l~~-e 248 (284)
T 1nv8_A 188 -EKFASIEMILSNPPYVKSSA--------HLP-KDVLF---EPPEALF-----GGEDGLDFYREFFGRYDTSGKIVLM-E 248 (284)
T ss_dssp -GGTTTCCEEEECCCCBCGGG--------SCT-TSCCC---SCHHHHB-----CTTTSCHHHHHHHHHCCCTTCEEEE-E
T ss_pred -cccCCCCEEEEcCCCCCccc--------ccC-hhhcc---CcHHHhc-----CCCcHHHHHHHHHHhcCCCCCEEEE-E
Confidence 244 54444433321000 000 00000 0000000 0112236788999 99999999998 6
Q ss_pred eccc
Q psy889 157 FSHV 160 (167)
Q Consensus 157 ~~~~ 160 (167)
+...
T Consensus 249 ~~~~ 252 (284)
T 1nv8_A 249 IGED 252 (284)
T ss_dssp CCTT
T ss_pred ECch
Confidence 5543
No 201
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.33 E-value=4.1e-13 Score=102.36 Aligned_cols=97 Identities=19% Similarity=0.097 Sum_probs=65.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.++++....... .
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g------------~~~V~gvDis~~ml~~a~~~~~~~~~~--~----------------- 87 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNG------------AKLVYALDVGTNQLAWKIRSDERVVVM--E----------------- 87 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------CSEEEEECSSCCCCCHHHHTCTTEEEE--C-----------------
T ss_pred CEEEEEccCCCHHHHHHHhcC------------CCEEEEEcCCHHHHHHHHHhCcccccc--c-----------------
Confidence 479999999999999998842 358999999999999987654321110 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEee-cccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLE-ANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
..++.+.. .+.....+....||+++++. ..++++++++|||||++++.
T Consensus 88 -------------------~~~~~~~~~~~~~~~~~d~~~~D~v~~~l--------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 88 -------------------QFNFRNAVLADFEQGRPSFTSIDVSFISL--------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp -------------------SCCGGGCCGGGCCSCCCSEEEECCSSSCG--------GGTHHHHHHHSCTTCEEEEE
T ss_pred -------------------cceEEEeCHhHcCcCCCCEEEEEEEhhhH--------HHHHHHHHHhccCCCEEEEE
Confidence 01122222 22222122345677766542 77999999999999999985
No 202
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=7.6e-13 Score=110.11 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=83.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-C
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-~ 79 (167)
++|||+|||+|..+..++..+. ..++++++|+++.+++.++++++..+. . +++..+|+..++ +
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~----------~~g~V~AvDis~~~l~~a~~n~~r~G~-----~-v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMG----------GKGLLLANEVDGKRVRGLLENVERWGA-----P-LAVTQAPPRALAEA 166 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHHCC-----C-CEEECSCHHHHHHH
T ss_pred CEEEEEcCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC-----e-EEEEECCHHHhhhh
Confidence 4899999999999999998874 247899999999999999999988775 1 566666766654 3
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..+.||.+++..+-+....... + .+.......-++- ........+++++.++|||||+|++++++
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr-------~-pd~~~~~~~~~~~------~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRK-------D-REAARHWGPSAPK------RMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTT-------C-TTSGGGCCTTHHH------HHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccccCCEEEECCCcCCcccccc-------C-hHHhhhcCHHHHH------HHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 4556676665544332110000 0 0000000000000 00123478899999999999999987654
No 203
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.33 E-value=9.8e-13 Score=98.92 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=79.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..+++.+. ...+++++|+++.+++.+++++...+.
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~--------------------- 119 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALP----------ADGRVVTCEVDAQPPELGRPLWRQAEA--------------------- 119 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCSHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEEcCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHCCC---------------------
Confidence 3799999999999999998763 267999999999999999999876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C-CC----ccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P-IE----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...|..+. + .. .++||+|++... ......+++++.++|+|||.+++
T Consensus 120 -------------------~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 120 -------------------EHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp -------------------TTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEE
Confidence 13566666655332 1 11 156899887432 34567889999999999999998
Q ss_pred Eeec
Q psy889 155 LEFS 158 (167)
Q Consensus 155 ~~~~ 158 (167)
.+..
T Consensus 178 ~~~~ 181 (229)
T 2avd_A 178 LRVL 181 (229)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 6543
No 204
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.32 E-value=1e-12 Score=97.95 Aligned_cols=86 Identities=24% Similarity=0.284 Sum_probs=69.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+ ..+++++|+++. .
T Consensus 69 ~~vLDiG~G~G~~~~~l----------------~~~v~~~D~s~~------------~---------------------- 98 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSI----------------RNPVHCFDLASL------------D---------------------- 98 (215)
T ss_dssp SCEEEETCTTCHHHHHC----------------CSCEEEEESSCS------------S----------------------
T ss_pred CeEEEECCcCCHHHHHh----------------hccEEEEeCCCC------------C----------------------
Confidence 37999999999987655 245999999986 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 159 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (167)
+.+...|....++.+++||+|++..++++ .+...++++++++|+|||.+++.++..
T Consensus 99 ----------------------~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 99 ----------------------PRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp ----------------------TTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred ----------------------ceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 22345566666666788999999988874 889999999999999999999988764
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.31 E-value=1.2e-12 Score=102.98 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=66.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.+.++-.+... +..
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~g------------a~~V~aVDvs~~mL~~a~r~~~rv~~---------~~~--------- 136 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNG------------AKLVYAVDVGTNQLVWKLRQDDRVRS---------MEQ--------- 136 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTT------------CSEEEEECSSSSCSCHHHHTCTTEEE---------ECS---------
T ss_pred cEEEecCCCccHHHHHHHhCC------------CCEEEEEECCHHHHHHHHHhCcccce---------ecc---------
Confidence 379999999999999988742 46899999999999885432111000 000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++... ..+.+ +..+||++++..++++ +..+|.+++++|+|||.++++
T Consensus 137 --------------------~ni~~l--~~~~l--~~~~fD~v~~d~sf~s---l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 137 --------------------YNFRYA--EPVDF--TEGLPSFASIDVSFIS---LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp --------------------CCGGGC--CGGGC--TTCCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEE
T ss_pred --------------------cCceec--chhhC--CCCCCCEEEEEeeHhh---HHHHHHHHHHHcCcCCEEEEE
Confidence 011111 11112 2235899888766553 478999999999999999997
No 206
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=8e-13 Score=101.16 Aligned_cols=79 Identities=4% Similarity=-0.089 Sum_probs=63.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC---C
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---P 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l---~ 78 (167)
+|||+|||+|.++..++.... +.+++++|+|+.+++.|++++...+. .+++++..+|+... +
T Consensus 68 ~vLDlG~G~G~~~~~la~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~ 132 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATLN-----------GWYFLATEVDDMCFNYAKKNVEQNNL----SDLIKVVKVPQKTLLMDA 132 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHHH-----------CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTCSSTTT
T ss_pred EEEEeCCChhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHHcCC----CccEEEEEcchhhhhhhh
Confidence 799999999999999988763 68899999999999999999876543 23588899987762 3
Q ss_pred CC---CCCCceeeeeecccc
Q psy889 79 IE---SDSYSAYTIAFGIRN 95 (167)
Q Consensus 79 ~~---~~~fd~~~~~~~~~~ 95 (167)
++ .+.||.+.+.++...
T Consensus 133 ~~~~~~~~fD~i~~npp~~~ 152 (254)
T 2h00_A 133 LKEESEIIYDFCMCNPPFFA 152 (254)
T ss_dssp STTCCSCCBSEEEECCCCC-
T ss_pred hhcccCCcccEEEECCCCcc
Confidence 44 268999998877653
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.30 E-value=2.3e-12 Score=102.31 Aligned_cols=109 Identities=15% Similarity=0.137 Sum_probs=76.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.+++++..........
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~---------------- 131 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHP-----------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDD---------------- 131 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTST-----------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC----------------
T ss_pred CeEEEEcCCcCHHHHHHHhcC-----------CCCEEEEEECCHHHHHHHHHHhHhhccccccC----------------
Confidence 379999999999999998865 26789999999999999998875321000001
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccc---cc--c--HHHHHHHHHHhcCCCcEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRN---VT--R--IDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~---~~--~--~~~~l~~~~~~LkpgG~l 152 (167)
.++.+...|... ++...++||+|++....++ -+ . ...++++++++|+|||.+
T Consensus 132 --------------------~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~l 191 (314)
T 1uir_A 132 --------------------PRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVM 191 (314)
T ss_dssp --------------------TTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEE
T ss_pred --------------------CceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEE
Confidence 356666666544 2223456888877554333 11 1 368899999999999999
Q ss_pred EEEe
Q psy889 153 LCLE 156 (167)
Q Consensus 153 ~~~~ 156 (167)
++..
T Consensus 192 v~~~ 195 (314)
T 1uir_A 192 GMQT 195 (314)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9854
No 208
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=2.4e-12 Score=107.62 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=79.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|.++..+++.. ..+++++|+|+ +++.|++++...+.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~------------~~~V~gvD~s~-~l~~A~~~~~~~gl--------------------- 205 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAG------------ARKIYAVEAST-MAQHAEVLVKSNNL--------------------- 205 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTT------------CSEEEEEECHH-HHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCcccHHHHHHHHcC------------CCEEEEEEcHH-HHHHHHHHHHHcCC---------------------
Confidence 479999999999999888732 56899999998 99999988876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccc--ccHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.+...|..+++.. +.||+|++...++++ ......+.+++++|||||.+++
T Consensus 206 -------------------~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 206 -------------------TDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp -------------------TTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred -------------------CCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 14688888888776543 579999997654443 3456677889999999999985
No 209
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.30 E-value=2e-12 Score=107.35 Aligned_cols=127 Identities=12% Similarity=0.017 Sum_probs=81.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-C
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-~ 79 (167)
++|||+|||+|..+..++..+. ...+++++|+++.+++.++++++..+. .++++..+|+..++ .
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~----------~~g~V~AvDis~~rl~~~~~n~~r~g~-----~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMK----------GKGLLVTNEIFPKRAKILSENIERWGV-----SNAIVTNHAPAELVPH 171 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHT----------TCSEEEEECSSHHHHHHHHHHHHHHTC-----SSEEEECCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHcC----------CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEeCCHHHhhhh
Confidence 4899999999999999998874 257899999999999999999988775 23555566655543 2
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh--hccc-ccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA--FGIR-NVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~--~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..+.||.+++..+-+..... . ...|..... ..+. .......++.++.++|||||+|++++
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~-----------r------r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMF-----------R------KDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGT-----------T------TCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCEEEECCCCCCcccc-----------c------cCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 34455655544332211000 0 000111000 0000 01223578999999999999999876
Q ss_pred ecc
Q psy889 157 FSH 159 (167)
Q Consensus 157 ~~~ 159 (167)
++.
T Consensus 235 Cs~ 237 (456)
T 3m4x_A 235 CTF 237 (456)
T ss_dssp SCC
T ss_pred eec
Confidence 643
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.30 E-value=2.6e-12 Score=102.93 Aligned_cols=105 Identities=16% Similarity=0.207 Sum_probs=76.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc--ccCCCCCCcccccccccccCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~l~ 78 (167)
.+|||+|||+|.++..++++. ...+++++|+|+.+++.|++++... +. .
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~-----------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl---~--------------- 172 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHA-----------SIEQIDMCEIDKMVVDVSKQFFPDVAIGY---E--------------- 172 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCT-----------TCCEEEEEESCHHHHHHHHHHCHHHHGGG---G---------------
T ss_pred CEEEEECCCccHHHHHHHHcC-----------CCCEEEEEECCHHHHHHHHHHHHhhcccc---C---------------
Confidence 379999999999999998865 3678999999999999999987542 11 0
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCC--CCCccchhhHhhhhcc--ccccc--HHHHHHHHHHhcCCCcEE
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL--PIESDSYSAYTIAFGI--RNVTR--IDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~~~--~~~~~--~~~~l~~~~~~LkpgG~l 152 (167)
..++.+...|.... ....++||+|++.... +.... ...++++++++|+|||.|
T Consensus 173 ---------------------~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~l 231 (334)
T 1xj5_A 173 ---------------------DPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVV 231 (334)
T ss_dssp ---------------------STTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEE
T ss_pred ---------------------CCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 13566666665432 1234578888874331 11111 368899999999999999
Q ss_pred EEE
Q psy889 153 LCL 155 (167)
Q Consensus 153 ~~~ 155 (167)
++.
T Consensus 232 v~~ 234 (334)
T 1xj5_A 232 CTQ 234 (334)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.28 E-value=8.6e-12 Score=101.27 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=78.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|-+++.++++. ..+++++|.|+ +++.|++.++..+.
T Consensus 86 ~VLDvG~GtGiLs~~Aa~aG------------A~~V~ave~s~-~~~~a~~~~~~n~~---------------------- 130 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQAG------------ARRVYAVEASA-IWQQAREVVRFNGL---------------------- 130 (376)
T ss_dssp EEEEETCTTSHHHHHHHHTT------------CSEEEEEECST-THHHHHHHHHHTTC----------------------
T ss_pred EEEEeCCCccHHHHHHHHhC------------CCEEEEEeChH-HHHHHHHHHHHcCC----------------------
Confidence 69999999999998887754 45799999986 88999988876554
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh---cccccccHHHHHHHHHHhcCCCcEEEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF---GIRNVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
..++.++..+.+++..+ ..+|+|++.. .+.+...+..++....++|||||.++-
T Consensus 131 ------------------~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 131 ------------------EDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ------------------TTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ------------------CceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 25688888888877654 5799998843 344455678888888999999999874
No 212
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.28 E-value=7.6e-12 Score=95.23 Aligned_cols=103 Identities=11% Similarity=-0.052 Sum_probs=80.6
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|+|+|||+|.++..++... +..+++++|+++.+++.|+++++..+.
T Consensus 24 ~VlDIGtGsG~l~i~la~~~-----------~~~~V~AvDi~~~al~~A~~N~~~~gl---------------------- 70 (230)
T 3lec_A 24 RLLDVGSDHAYLPIFLLQMG-----------YCDFAIAGEVVNGPYQSALKNVSEHGL---------------------- 70 (230)
T ss_dssp EEEEETCSTTHHHHHHHHTT-----------CEEEEEEEESSHHHHHHHHHHHHHTTC----------------------
T ss_pred EEEEECCchHHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC----------------------
Confidence 79999999999999998865 256899999999999999999987765
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+...+...||+|++.... -..+..++.+..+.|+++|+|++...
T Consensus 71 ------------------~~~I~~~~gD~l~~~~~~~~~D~IviaGmG--g~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 71 ------------------TSKIDVRLANGLSAFEEADNIDTITICGMG--GRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp ------------------TTTEEEEECSGGGGCCGGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ------------------CCcEEEEECchhhccccccccCEEEEeCCc--hHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 246888888876654443469988753321 13467788888899999999988654
No 213
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.28 E-value=6.2e-12 Score=103.66 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=78.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
.+|||+|||+|..+..+++... ..+++++|+++.+++.+++++...+. ++++..+|+..++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~-----------~~~v~a~D~~~~~l~~~~~~~~~~g~------~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAP-----------EAQVVAVDIDEQRLSRVYDNLKRLGM------KATVKQGDGRYPSQW 310 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-----------TCEEEEEESSTTTHHHHHHHHHHTTC------CCEEEECCTTCTHHH
T ss_pred CeEEEECCCchHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHHHHHcCC------CeEEEeCchhhchhh
Confidence 4799999999999999999773 57899999999999999999887654 2345555555443
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh--hcc-cccccHHHHHHHHHHhcCCCcEEEEE
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA--FGI-RNVTRIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~--~~~-~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
++.+.||.+.+..+-+..... ... .|.-... ..+ ........++.++.++|||||+++++
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~-----------~~~------p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvys 373 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVI-----------RRH------PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGT-----------TTC------TTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCCCEEEEeCCCCccccc-----------CCC------cchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 333445544443322111000 000 0000000 000 00112357889999999999999997
Q ss_pred eecc
Q psy889 156 EFSH 159 (167)
Q Consensus 156 ~~~~ 159 (167)
+++.
T Consensus 374 tcs~ 377 (429)
T 1sqg_A 374 TCSV 377 (429)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7653
No 214
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.27 E-value=3.9e-12 Score=100.14 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=73.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.+++++..... ....
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~~~~a~~~~~~~~~-~~~~---------------- 143 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHD-----------SVEKAILCEVDGLVIEAARKYLKQTSC-GFDD---------------- 143 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTST-----------TCSEEEEEESCHHHHHHHHHHCHHHHG-GGGC----------------
T ss_pred CEEEEEcCCcCHHHHHHHhcC-----------CCCEEEEEECCHHHHHHHHHHhHhhcc-ccCC----------------
Confidence 379999999999999998865 267899999999999999998753210 0001
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccc-----cHHHHHHHHHHhcCCCcEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVT-----RIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.++.+...|... ++...++||+|++.....+.. ....++++++++|+|||.+++
T Consensus 144 --------------------~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 144 --------------------PRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp --------------------TTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred --------------------CceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 345666665433 222245678777632211111 236788999999999999998
Q ss_pred Ee
Q psy889 155 LE 156 (167)
Q Consensus 155 ~~ 156 (167)
..
T Consensus 204 ~~ 205 (296)
T 1inl_A 204 ET 205 (296)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.27 E-value=8e-12 Score=94.85 Aligned_cols=102 Identities=13% Similarity=0.003 Sum_probs=78.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|+|+|||+|.++..++... +..+++++|+++.+++.|++++...+.
T Consensus 18 ~VlDIGtGsG~l~i~la~~~-----------~~~~V~avDi~~~al~~A~~N~~~~gl---------------------- 64 (225)
T 3kr9_A 18 ILLDVGSDHAYLPIELVERG-----------QIKSAIAGEVVEGPYQSAVKNVEAHGL---------------------- 64 (225)
T ss_dssp EEEEETCSTTHHHHHHHHTT-----------SEEEEEEEESSHHHHHHHHHHHHHTTC----------------------
T ss_pred EEEEeCCCcHHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC----------------------
Confidence 79999999999999999865 356899999999999999999987765
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+ ++. ...||+|+.... .-..+..++.+..+.|+++|+|++...
T Consensus 65 ------------------~~~i~~~~~d~l~~l~~-~~~~D~IviaG~--Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 65 ------------------KEKIQVRLANGLAAFEE-TDQVSVITIAGM--GGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ------------------TTTEEEEECSGGGGCCG-GGCCCEEEEEEE--CHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ------------------CceEEEEECchhhhccc-CcCCCEEEEcCC--ChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 1467888887643 322 125998876432 112367889999999999999988543
No 216
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.26 E-value=3e-12 Score=104.29 Aligned_cols=108 Identities=8% Similarity=0.030 Sum_probs=72.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.|+++++..+. .+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~g------------a~~V~~vD~s~~al~~A~~N~~~n~~----~~--------------- 262 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGG------------AMATTSVDLAKRSRALSLAHFEANHL----DM--------------- 262 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTT------------BSEEEEEESCTTHHHHHHHHHHHTTC----CC---------------
T ss_pred CeEEEEeeccCHHHHHHHHCC------------CCEEEEEECCHHHHHHHHHHHHHcCC----Cc---------------
Confidence 379999999999999998732 34799999999999999999876554 11
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-C---CCccchhhHhhh---------hcccccccHHHHHHHHHHhcC
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-P---IESDSYSAYTIA---------FGIRNVTRIDKALSEAYRVLK 147 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~---~~~~~~D~v~~~---------~~~~~~~~~~~~l~~~~~~Lk 147 (167)
.++.+...|..+. + .....||+|++. ...........++.++.++|+
T Consensus 263 --------------------~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~ 322 (385)
T 2b78_A 263 --------------------ANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILS 322 (385)
T ss_dssp --------------------TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEE
T ss_pred --------------------cceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcC
Confidence 0344444443321 1 011245555541 111223445678889999999
Q ss_pred CCcEEEEEeecc
Q psy889 148 PGGRFLCLEFSH 159 (167)
Q Consensus 148 pgG~l~~~~~~~ 159 (167)
|||.+++.+...
T Consensus 323 pgG~l~~~~~~~ 334 (385)
T 2b78_A 323 ENGLIIASTNAA 334 (385)
T ss_dssp EEEEEEEEECCT
T ss_pred CCcEEEEEeCCC
Confidence 999999866443
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=1.1e-11 Score=95.07 Aligned_cols=103 Identities=12% Similarity=-0.031 Sum_probs=79.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++... +..+++++|+++.+++.|+++++..+.
T Consensus 24 ~VlDIGtGsG~l~i~la~~~-----------~~~~V~avDi~~~al~~A~~N~~~~gl---------------------- 70 (244)
T 3gnl_A 24 RIADIGSDHAYLPCFAVKNQ-----------TASFAIAGEVVDGPFQSAQKQVRSSGL---------------------- 70 (244)
T ss_dssp EEEEETCSTTHHHHHHHHTT-----------SEEEEEEEESSHHHHHHHHHHHHHTTC----------------------
T ss_pred EEEEECCccHHHHHHHHHhC-----------CCCEEEEEECCHHHHHHHHHHHHHcCC----------------------
Confidence 79999999999999998865 256899999999999999999987765
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..++.+...|..+...+...||+|++...- -..+..++.+..+.|+++|+|++...
T Consensus 71 ------------------~~~I~v~~gD~l~~~~~~~~~D~IviagmG--g~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 71 ------------------TEQIDVRKGNGLAVIEKKDAIDTIVIAGMG--GTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ------------------TTTEEEEECSGGGGCCGGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ------------------CceEEEEecchhhccCccccccEEEEeCCc--hHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 145788888876544333359988763321 13467788888999999999888553
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.26 E-value=3.6e-12 Score=101.53 Aligned_cols=108 Identities=13% Similarity=0.218 Sum_probs=74.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+|+.+++.+++++..... ....
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDis~~~l~~ar~~~~~~~~-~~~~---------------- 169 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYK-----------SVENIDICEIDETVIEVSKIYFKNISC-GYED---------------- 169 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCT-----------TCCEEEEEESCHHHHHHHHHHCTTTSG-GGGS----------------
T ss_pred CEEEEEcCCccHHHHHHHHcC-----------CCCEEEEEECCHHHHHHHHHHHHhhcc-ccCC----------------
Confidence 379999999999999998764 267899999999999999988754210 0001
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhcccc--cccH--HHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRN--VTRI--DKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~--~~~~--~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|..+. +..+++||+|++...... .... ..++++++++|+|||.+++.
T Consensus 170 --------------------~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 170 --------------------KRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp --------------------TTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------CcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 3466666654331 122356788876432111 1111 68899999999999999984
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 230 ~ 230 (321)
T 2pt6_A 230 C 230 (321)
T ss_dssp E
T ss_pred c
Confidence 3
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.26 E-value=4.3e-12 Score=100.33 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=74.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc--ccCCCCCCcccccccccccCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~l~ 78 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.+++++... +. .
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~i~~ar~~~~~~~~~~---~--------------- 147 (304)
T 2o07_A 97 RKVLIIGGGDGGVLREVVKHP-----------SVESVVQCEIDEDVIQVSKKFLPGMAIGY---S--------------- 147 (304)
T ss_dssp CEEEEEECTTSHHHHHHTTCT-----------TCCEEEEEESCHHHHHHHHHHCHHHHGGG---G---------------
T ss_pred CEEEEECCCchHHHHHHHHcC-----------CCCEEEEEECCHHHHHHHHHHhHHhhccc---C---------------
Confidence 379999999999999998864 2578999999999999999987542 11 0
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccc----cHHHHHHHHHHhcCCCcEEE
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVT----RIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~ 153 (167)
..++.+...|... ++...++||+|++.......+ ....++++++++|+|||.++
T Consensus 148 ---------------------~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 206 (304)
T 2o07_A 148 ---------------------SSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLC 206 (304)
T ss_dssp ---------------------CTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEE
Confidence 1356666666543 222346688888744322111 13568999999999999999
Q ss_pred EEe
Q psy889 154 CLE 156 (167)
Q Consensus 154 ~~~ 156 (167)
+..
T Consensus 207 ~~~ 209 (304)
T 2o07_A 207 CQG 209 (304)
T ss_dssp EEE
T ss_pred Eec
Confidence 854
No 220
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.26 E-value=4.5e-12 Score=98.84 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=75.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++. ...+++++|+++.+++.+++++..... ....
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vEid~~~v~~ar~~~~~~~~-~~~~---------------- 128 (275)
T 1iy9_A 77 EHVLVVGGGDGGVIREILKHP-----------SVKKATLVDIDGKVIEYSKKFLPSIAG-KLDD---------------- 128 (275)
T ss_dssp CEEEEESCTTCHHHHHHTTCT-----------TCSEEEEEESCHHHHHHHHHHCHHHHT-TTTS----------------
T ss_pred CEEEEECCchHHHHHHHHhCC-----------CCceEEEEECCHHHHHHHHHHhHhhcc-ccCC----------------
Confidence 379999999999999998764 257899999999999999998754210 0011
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccc----cHHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVT----RIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|... ++....+||+|++.......+ ....++++++++|+|||.+++.
T Consensus 129 --------------------~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 129 --------------------PRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp --------------------TTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------CceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 355666665443 222245688887743322111 1367899999999999999885
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 189 ~ 189 (275)
T 1iy9_A 189 T 189 (275)
T ss_dssp C
T ss_pred c
Confidence 3
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.25 E-value=2.5e-12 Score=102.21 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=72.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++++. +..+++++|+++.+++.|++++..... ....
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~i~~Ar~~~~~~~~-~~~~---------------- 161 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHE-----------SVEKVTMCEIDEMVIDVAKKFLPGMSC-GFSH---------------- 161 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCT-----------TCCEEEEECSCHHHHHHHHHHCTTTSG-GGGC----------------
T ss_pred CEEEEEcCCcCHHHHHHHHcC-----------CCCEEEEEECCHHHHHHHHHHHHHhcc-ccCC----------------
Confidence 379999999999999998865 367999999999999999988753210 0001
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCC-CCCCccchhhHhhhhcccccc--cH--HHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESDSYSAYTIAFGIRNVT--RI--DKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~--~~--~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|... ++...++||+|++......-+ .. ..++++++++|+|||.+++.
T Consensus 162 --------------------~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 162 --------------------PKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp --------------------TTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred --------------------CCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 356666665543 222345688887643221111 11 67889999999999999984
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 222 ~ 222 (314)
T 2b2c_A 222 G 222 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.25 E-value=4.1e-12 Score=99.37 Aligned_cols=108 Identities=13% Similarity=0.203 Sum_probs=76.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++++. ...+++++|+++.+++.+++++...... ..
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~-----------~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~----------------- 130 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYK-----------SVENIDICEIDETVIEVSKIYFKNISCG-YE----------------- 130 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCT-----------TCCEEEEEESCHHHHHHHHHHCTTTSGG-GG-----------------
T ss_pred CeEEEEeCCcCHHHHHHHHcC-----------CCCEEEEEECCHHHHHHHHHHhHHhccc-cC-----------------
Confidence 379999999999999998764 3678999999999999999876532100 00
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhccccc--ccH--HHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRNV--TRI--DKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~~--~~~--~~~l~~~~~~LkpgG~l~~~ 155 (167)
..++.+...|.... +...++||+|++....... ... ..++++++++|+|||.+++.
T Consensus 131 -------------------~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 131 -------------------DKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp -------------------STTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred -------------------CCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 14566666665432 2224678888874332221 122 68899999999999999985
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 192 ~ 192 (283)
T 2i7c_A 192 C 192 (283)
T ss_dssp C
T ss_pred C
Confidence 3
No 223
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.24 E-value=8.4e-12 Score=91.43 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=66.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++..... +.....+..+++++|+++.. ..
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~--~~~~~~~~~~v~~vD~s~~~-----------~~--------------------- 69 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAA--GTDPSSPVGFVLGVDLLHIF-----------PL--------------------- 69 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTT--CCCTTSCCCEEEEECSSCCC-----------CC---------------------
T ss_pred CEEEEeCCCCCHHHHHHHHHhccc--cccccCCCceEEEEechhcc-----------cC---------------------
Confidence 479999999999999999876310 00000012789999999831 01
Q ss_pred CCCCceeeeeeccccccCCCCceEEe-ecccCCCC--------CCccchhhHhhhhccc----ccccH-------HHHHH
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFL-EANAEELP--------IESDSYSAYTIAFGIR----NVTRI-------DKALS 140 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~--------~~~~~~D~v~~~~~~~----~~~~~-------~~~l~ 140 (167)
.++.+. ..|..... ....+||+|++...++ +..+. ..+++
T Consensus 70 --------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 129 (196)
T 2nyu_A 70 --------------------EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLS 129 (196)
T ss_dssp --------------------TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHH
Confidence 123333 33433221 2234688888754332 22222 57899
Q ss_pred HHHHhcCCCcEEEEEeeccc
Q psy889 141 EAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 141 ~~~~~LkpgG~l~~~~~~~~ 160 (167)
+++++|||||.+++..+...
T Consensus 130 ~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 130 VTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHEEEEEEEEEEECCSG
T ss_pred HHHHHhcCCCEEEEEecCCc
Confidence 99999999999999877544
No 224
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.23 E-value=1.7e-12 Score=94.02 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=61.1
Q ss_pred eeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCC---C
Q psy889 40 ADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPI---E 116 (167)
Q Consensus 40 ~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~ 116 (167)
+|+|+.|++.++++.. .++.+...|+..++. .
T Consensus 26 vD~s~~ml~~a~~~~~---------------------------------------------~~~~~~~~d~~~~~~~~~~ 60 (176)
T 2ld4_A 26 VEALKGLVDKLQALTG---------------------------------------------NEGRVSVENIKQLLQSAHK 60 (176)
T ss_dssp HHHHHHHHHHHHHHTT---------------------------------------------TTSEEEEEEGGGGGGGCCC
T ss_pred eeCCHHHHHHHHHhcc---------------------------------------------cCcEEEEechhcCccccCC
Confidence 8999999999998753 235666777776665 6
Q ss_pred ccchhhHhhhhccccc-ccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 117 SDSYSAYTIAFGIRNV-TRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 117 ~~~~D~v~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
+++||+|++..+++++ ++...++++++++|||||+|++.+
T Consensus 61 ~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp SSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 7889999999999999 899999999999999999999954
No 225
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.23 E-value=4.2e-12 Score=103.51 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=74.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++...+. .+++++..+|+.+....
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g------------~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~ 282 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAG------------ADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEK 282 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHCC------------CCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHH
Confidence 479999999999999998742 35899999999999999999876543 11344444444332100
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh---------cccccccHHHHHHHHHHhcCCCcE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF---------GIRNVTRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---------~~~~~~~~~~~l~~~~~~LkpgG~ 151 (167)
.......||+|++.- ..........++.++.++|+|||.
T Consensus 283 --------------------------------~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 330 (396)
T 2as0_A 283 --------------------------------LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGI 330 (396)
T ss_dssp --------------------------------HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred --------------------------------HHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 000123345544421 112235567889999999999999
Q ss_pred EEEEeecc
Q psy889 152 FLCLEFSH 159 (167)
Q Consensus 152 l~~~~~~~ 159 (167)
+++++++.
T Consensus 331 lv~~~~~~ 338 (396)
T 2as0_A 331 LVTCSCSQ 338 (396)
T ss_dssp EEEEECCT
T ss_pred EEEEECCC
Confidence 99877654
No 226
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.22 E-value=5.6e-12 Score=98.48 Aligned_cols=112 Identities=10% Similarity=0.046 Sum_probs=72.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++++ . ..+++++|+++.+++.+++++ .... ... ...+
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~-~-----------~~~v~~vDid~~~i~~ar~~~-~~~~-~l~------~~~~------- 129 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQH-D-----------VDEVIMVEIDEDVIMVSKDLI-KIDN-GLL------EAML------- 129 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTS-C-----------CSEEEEEESCHHHHHHHHHHT-CTTT-THH------HHHH-------
T ss_pred CeEEEEcCCcCHHHHHHHhC-C-----------CCEEEEEECCHHHHHHHHHHH-hhcc-ccc------cccc-------
Confidence 37999999999999999886 3 578999999999999999876 2200 000 0000
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhccccc--cc--HHHHHHHHHHhcCCCcEEEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRNV--TR--IDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~~--~~--~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.....++.+...|..+. .. .+.||+|++......- .. ...++++++++|+|||.+++.
T Consensus 130 ----------------~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 130 ----------------NGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp ----------------TTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------cCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 00013556666654331 11 4568888774432111 11 267889999999999999985
Q ss_pred e
Q psy889 156 E 156 (167)
Q Consensus 156 ~ 156 (167)
.
T Consensus 193 ~ 193 (281)
T 1mjf_A 193 A 193 (281)
T ss_dssp E
T ss_pred c
Confidence 3
No 227
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=4.2e-12 Score=103.17 Aligned_cols=108 Identities=24% Similarity=0.205 Sum_probs=73.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++...+. .++++..+|+.+....
T Consensus 212 ~VLDlg~G~G~~~~~la~~-------------~~~v~~vD~s~~~~~~a~~n~~~n~~-----~~~~~~~~d~~~~~~~- 272 (382)
T 1wxx_A 212 RALDVFSYAGGFALHLALG-------------FREVVAVDSSAEALRRAEENARLNGL-----GNVRVLEANAFDLLRR- 272 (382)
T ss_dssp EEEEETCTTTHHHHHHHHH-------------EEEEEEEESCHHHHHHHHHHHHHTTC-----TTEEEEESCHHHHHHH-
T ss_pred eEEEeeeccCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEECCHHHHHHH-
Confidence 7999999999999999885 35799999999999999999876554 1244444444332100
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhh---------cccccccHHHHHHHHHHhcCCCcEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAF---------GIRNVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---------~~~~~~~~~~~l~~~~~~LkpgG~l 152 (167)
.......||+|++.- ..........++.++.++|+|||.+
T Consensus 273 -------------------------------~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 321 (382)
T 1wxx_A 273 -------------------------------LEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGIL 321 (382)
T ss_dssp -------------------------------HHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred -------------------------------HHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 000022345444411 1112345678899999999999999
Q ss_pred EEEeecc
Q psy889 153 LCLEFSH 159 (167)
Q Consensus 153 ~~~~~~~ 159 (167)
++.+.+.
T Consensus 322 ~~~~~~~ 328 (382)
T 1wxx_A 322 ATASCSH 328 (382)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 9977654
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.21 E-value=1.4e-12 Score=101.91 Aligned_cols=104 Identities=10% Similarity=0.009 Sum_probs=69.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|..+..+++ . .+++|+|+++ ++..++++ .. +
T Consensus 84 ~~VLDlGcGtG~~s~~la~-------------~-~~V~gVD~s~-m~~~a~~~----~~---~----------------- 124 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAAS-------------Q-PNVREVKAYT-LGTSGHEK----PR---L----------------- 124 (276)
T ss_dssp EEEEEESCTTCHHHHHHHT-------------S-TTEEEEEEEC-CCCTTSCC----CC---C-----------------
T ss_pred CEEEEeccCCCHHHHHHHH-------------c-CCEEEEECch-hhhhhhhc----hh---h-----------------
Confidence 3799999999999999887 3 5699999998 53322211 00 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEe--ecccCCCCCCccchhhHhhhhcccccc----c-H--HHHHHHHHHhcCCCc-
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFL--EANAEELPIESDSYSAYTIAFGIRNVT----R-I--DKALSEAYRVLKPGG- 150 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~~~~~~~~~----~-~--~~~l~~~~~~LkpgG- 150 (167)
.. ..+.++.+. ..|...++ +.+||+|+|..+ +... + . ..++..+.++|||||
T Consensus 125 ~~---------------~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~ 186 (276)
T 2wa2_A 125 VE---------------TFGWNLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQG 186 (276)
T ss_dssp CC---------------CTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hh---------------hcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCC
Confidence 00 000146666 67776654 567999998665 2221 1 1 137899999999999
Q ss_pred -EEEEEeecccCC
Q psy889 151 -RFLCLEFSHVNN 162 (167)
Q Consensus 151 -~l~~~~~~~~~~ 162 (167)
.|++..++ ++.
T Consensus 187 ~~~v~~~~~-~~~ 198 (276)
T 2wa2_A 187 CGFCVKVLN-PYS 198 (276)
T ss_dssp CEEEEEESC-CCS
T ss_pred cEEEEEeCC-CCc
Confidence 99987776 444
No 229
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.21 E-value=3.4e-11 Score=94.08 Aligned_cols=104 Identities=10% Similarity=0.095 Sum_probs=80.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+++.+++.++++++..+.
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g------------~~~V~avD~np~a~~~~~~N~~~N~v--------------------- 173 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYG------------KAKVIAIEKDPYTFKFLVENIHLNKV--------------------- 173 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHT------------CCEEEEECCCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEecCcCcHHHHHHHHhc------------CCeEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 379999999999999998754 46899999999999999999987665
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
..++.+...|..+++. .+.||.|++.. .+.....+..+.+.||+||.+.+.++.+.
T Consensus 174 -------------------~~~v~~~~~D~~~~~~-~~~~D~Vi~~~----p~~~~~~l~~a~~~lk~gG~ih~~~~~~e 229 (278)
T 3k6r_A 174 -------------------EDRMSAYNMDNRDFPG-ENIADRILMGY----VVRTHEFIPKALSIAKDGAIIHYHNTVPE 229 (278)
T ss_dssp -------------------TTTEEEECSCTTTCCC-CSCEEEEEECC----CSSGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred -------------------CCcEEEEeCcHHHhcc-ccCCCEEEECC----CCcHHHHHHHHHHHcCCCCEEEEEeeecc
Confidence 1456777777766543 46688877643 23345677788899999999988776644
Q ss_pred C
Q psy889 161 N 161 (167)
Q Consensus 161 ~ 161 (167)
+
T Consensus 230 ~ 230 (278)
T 3k6r_A 230 K 230 (278)
T ss_dssp G
T ss_pred c
Confidence 3
No 230
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=1.9e-11 Score=106.50 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=74.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccccccc-CCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LPI 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~-l~~ 79 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.++++++..+. ...++++..+|+.+ ++.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~g------------a~~V~aVD~s~~al~~a~~N~~~ngl---~~~~v~~i~~D~~~~l~~ 605 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGG------------ARSTTTVDMSRTYLEWAERNLRLNGL---TGRAHRLIQADCLAWLRE 605 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHTTC---CSTTEEEEESCHHHHHHH
T ss_pred CcEEEeeechhHHHHHHHHCC------------CCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEEecCHHHHHHh
Confidence 379999999999999988732 34699999999999999999976654 11244555555443 222
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeec
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
..+.||.+.+.++... ..... ..++....+...++.++.++|+|||+|++....
T Consensus 606 ~~~~fD~Ii~DPP~f~-------------------~~~~~------~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 606 ANEQFDLIFIDPPTFS-------------------NSKRM------EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCCEEEEEECCCSBC--------------------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCccEEEECCcccc-------------------CCccc------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2233443333222110 00000 001233456778899999999999999975533
No 231
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.19 E-value=2.1e-12 Score=100.32 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=69.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|..+..+++ . .+++|+|+++ ++..++++ .. +
T Consensus 76 ~~VLDlGcGtG~~s~~la~-------------~-~~V~gvD~s~-m~~~a~~~----~~---~----------------- 116 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAAS-------------R-PHVMDVRAYT-LGVGGHEV----PR---I----------------- 116 (265)
T ss_dssp EEEEEESCTTSHHHHHHHT-------------S-TTEEEEEEEC-CCCSSCCC----CC---C-----------------
T ss_pred CEEEEeCcCCCHHHHHHHH-------------c-CcEEEEECch-hhhhhhhh----hh---h-----------------
Confidence 3799999999999998887 3 5699999998 53222110 00 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEe--ecccCCCCCCccchhhHhhhhcccccc----cHH---HHHHHHHHhcCCCc-
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFL--EANAEELPIESDSYSAYTIAFGIRNVT----RID---KALSEAYRVLKPGG- 150 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~~~~~~~~~----~~~---~~l~~~~~~LkpgG- 150 (167)
.. ..+.++.+. ..|...++ +.+||+|+|..+ +... +.. .+|..++++|||||
T Consensus 117 ~~---------------~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~ 178 (265)
T 2oxt_A 117 TE---------------SYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPS 178 (265)
T ss_dssp CC---------------BTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred hh---------------ccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCC
Confidence 00 000146666 67776654 567999998655 2221 111 37899999999999
Q ss_pred -EEEEEeecccCC
Q psy889 151 -RFLCLEFSHVNN 162 (167)
Q Consensus 151 -~l~~~~~~~~~~ 162 (167)
.|++..++ +..
T Consensus 179 ~~fv~kv~~-~~~ 190 (265)
T 2oxt_A 179 ADFVVKVLC-PYS 190 (265)
T ss_dssp CEEEEEESC-TTS
T ss_pred eEEEEEeCC-CCC
Confidence 99997777 543
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.18 E-value=1.8e-11 Score=99.95 Aligned_cols=106 Identities=17% Similarity=0.054 Sum_probs=71.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++.. +..++++|+|+.+++.++++++..+. ..++..+|+.+..
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~-------------ga~V~avDis~~al~~a~~n~~~ng~------~~~~~~~D~~~~l-- 274 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARK-------------GAYALAVDKDLEALGVLDQAALRLGL------RVDIRHGEALPTL-- 274 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCHHHHH--
T ss_pred CeEEEcccchhHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHHHhCC------CCcEEEccHHHHH--
Confidence 37999999999999999883 45599999999999999999876654 0112233333311
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhc---------ccccccHHHHHHHHHHhcCCCcE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG---------IRNVTRIDKALSEAYRVLKPGGR 151 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~---------~~~~~~~~~~l~~~~~~LkpgG~ 151 (167)
+...+.||+|++.-. .....+...++.++.++|+|||+
T Consensus 275 ---------------------------------~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~ 321 (393)
T 4dmg_A 275 ---------------------------------RGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGF 321 (393)
T ss_dssp ---------------------------------HTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred ---------------------------------HHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 000112444443211 11234567888999999999999
Q ss_pred EEEEeeccc
Q psy889 152 FLCLEFSHV 160 (167)
Q Consensus 152 l~~~~~~~~ 160 (167)
|++.+++..
T Consensus 322 Lv~~s~s~~ 330 (393)
T 4dmg_A 322 LWLSSCSYH 330 (393)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCCC
Confidence 997666543
No 233
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.17 E-value=4.7e-11 Score=96.76 Aligned_cols=103 Identities=17% Similarity=0.069 Sum_probs=69.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ...+++|+|+|+.+++.|++++...+. .
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~-----------~~~~v~g~Dis~~~l~~A~~n~~~~gl----~---------------- 267 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRR-----------YSGEIIGIEKYRKHLIGAEMNALAAGV----L---------------- 267 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTT-----------CCSCEEEEESCHHHHHHHHHHHHHTTC----G----------------
T ss_pred CEEEEccCcCcHHHHHHHHhC-----------CCCeEEEEeCCHHHHHHHHHHHHHcCC----C----------------
Confidence 479999999999999998865 245899999999999999999987654 1
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc-------cccc-HHHHHHHHHHhcCCCcEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR-------NVTR-IDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~-------~~~~-~~~~l~~~~~~LkpgG~l 152 (167)
.++.+...|..+++..+++||+|+++-.+. .+.. ...+++++.++| +|.+
T Consensus 268 --------------------~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~ 325 (373)
T 3tm4_A 268 --------------------DKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRG 325 (373)
T ss_dssp --------------------GGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEE
T ss_pred --------------------CceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeE
Confidence 234555555555444445556655532211 1122 266778889988 4555
Q ss_pred EEEe
Q psy889 153 LCLE 156 (167)
Q Consensus 153 ~~~~ 156 (167)
+++.
T Consensus 326 ~~i~ 329 (373)
T 3tm4_A 326 VFIT 329 (373)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 234
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.17 E-value=1.5e-11 Score=90.87 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=27.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
++|||+|||+|..+..+++. ..+++|+|+++.
T Consensus 27 ~~VLDlG~G~G~~s~~la~~-------------~~~V~gvD~~~~ 58 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL-------------ARKIISIDLQEM 58 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT-------------CSEEEEEESSCC
T ss_pred CEEEEEeecCCHHHHHHHHc-------------CCcEEEEecccc
Confidence 48999999999999999873 578999999874
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.17 E-value=4.3e-11 Score=95.71 Aligned_cols=99 Identities=10% Similarity=0.087 Sum_probs=76.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++.. +. . ..+++++|+|+.+++.++++++..+.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~------------~~~V~~vD~s~~ai~~a~~n~~~n~l--------------------- 241 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-N------------AKKIYAIDINPHAIELLKKNIKLNKL--------------------- 241 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-T------------SSEEEEEESCHHHHHHHHHHHHHTTC---------------------
T ss_pred CEEEEccCccCHHHHh-cc-C------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 3799999999999999 76 2 67899999999999999999876553
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
..++.+...|..+.. ..||+|++.- ......++..+.++|+|||.+++.+++..
T Consensus 242 -------------------~~~v~~~~~D~~~~~---~~fD~Vi~dp----P~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 242 -------------------EHKIIPILSDVREVD---VKGNRVIMNL----PKFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -------------------TTTEEEEESCGGGCC---CCEEEEEECC----TTTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -------------------CCcEEEEECChHHhc---CCCcEEEECC----cHhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 134666666665544 5688887632 11234788899999999999999887754
No 236
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.16 E-value=2.5e-11 Score=98.99 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=74.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~- 79 (167)
.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++...+. +.+++++..+|+.+...
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g------------~~~V~~vD~s~~al~~a~~n~~~ngl---~~~~v~~~~~D~~~~~~~ 286 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGG------------CSQVVSVDTSQEALDIARQNVELNKL---DLSKAEFVRDDVFKLLRT 286 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEESCHHHHHHH
T ss_pred CeEEEeeccCCHHHHHHHHCC------------CCEEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECCHHHHHHH
Confidence 479999999999999998842 35899999999999999999875432 01144555555444210
Q ss_pred ---CCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 80 ---ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 80 ---~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
....||.+.+.++... .... ...........++.++.+.|+|||++++.+
T Consensus 287 ~~~~~~~fD~Ii~dpP~~~-------------------~~~~--------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 287 YRDRGEKFDVIVMDPPKFV-------------------ENKS--------QLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp HHHTTCCEEEEEECCSSTT-------------------TCSS--------SSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhcCCCCCEEEECCCCCC-------------------CChh--------HHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 0223343333222110 0000 012233566788999999999999999866
Q ss_pred ecc
Q psy889 157 FSH 159 (167)
Q Consensus 157 ~~~ 159 (167)
.+.
T Consensus 340 ~~~ 342 (396)
T 3c0k_A 340 CSG 342 (396)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
No 237
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.14 E-value=5.9e-11 Score=92.87 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=38.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....
T Consensus 30 ~~VLDiG~G~G~lt~~L~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~ 73 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLEK-------------AKKVVACELDPRLVAELHKRVQGT 73 (285)
T ss_dssp CEEEEECCTTSTTHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHTTS
T ss_pred CEEEEEcCcccHHHHHHHhh-------------CCEEEEEECCHHHHHHHHHHHHhc
Confidence 37999999999999999884 468999999999999999887543
No 238
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.13 E-value=1.2e-10 Score=85.88 Aligned_cols=85 Identities=15% Similarity=0.181 Sum_probs=59.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..++... ..+++++|+++.+++.++++..
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~------------~~~v~~vD~~~~~~~~a~~~~~------------------------- 95 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLG------------AESVTAFDIDPDAIETAKRNCG------------------------- 95 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTT------------BSEEEEEESCHHHHHHHHHHCT-------------------------
T ss_pred CEEEEEeCCccHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHhcC-------------------------
Confidence 379999999999999998742 3579999999999999998753
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccccccc--HHHHHHHHHHhc
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR--IDKALSEAYRVL 146 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~--~~~~l~~~~~~L 146 (167)
++.+...|...++ ++||+|+++..+++... ...+++++.+++
T Consensus 96 ---------------------~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 96 ---------------------GVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ---------------------TSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred ---------------------CCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 2445555555443 46777777666665543 346777888877
No 239
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.10 E-value=4e-10 Score=83.22 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=52.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++....+. ++++..+|+..++
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~-- 110 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLG------------AKEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDVSEFN-- 110 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCGGGCC--
T ss_pred CEEEEeeCCCCHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECchHHcC--
Confidence 379999999999999998742 34799999999999999998765432 4555666655543
Q ss_pred CCCCceeeeeecc
Q psy889 81 SDSYSAYTIAFGI 93 (167)
Q Consensus 81 ~~~fd~~~~~~~~ 93 (167)
..||.+.+..+.
T Consensus 111 -~~~D~v~~~~p~ 122 (207)
T 1wy7_A 111 -SRVDIVIMNPPF 122 (207)
T ss_dssp -CCCSEEEECCCC
T ss_pred -CCCCEEEEcCCC
Confidence 255555555443
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=1.9e-10 Score=92.07 Aligned_cols=123 Identities=12% Similarity=0.100 Sum_probs=77.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++.+.... . ...+++|+|+++.+++.|+.+....+. +.++..+|.... ...
T Consensus 133 ~VlDp~cGsG~~l~~~~~~~~~~~--~----~~~~v~GiDi~~~~~~~a~~n~~~~g~------~~~i~~~D~l~~-~~~ 199 (344)
T 2f8l_A 133 SILDPACGTANLLTTVINQLELKG--D----VDVHASGVDVDDLLISLALVGADLQRQ------KMTLLHQDGLAN-LLV 199 (344)
T ss_dssp EEEETTCTTSHHHHHHHHHHHTTS--S----CEEEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCTTSC-CCC
T ss_pred EEEeCCCCccHHHHHHHHHHHHhc--C----CCceEEEEECCHHHHHHHHHHHHhCCC------CceEEECCCCCc-ccc
Confidence 799999999999999998873100 0 026899999999999999998875543 355666665442 234
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH-HHHHHHHHHhcCCCcEEEEEe
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..||.++..++....... .. . ..|+.- ......+. ..++.++.+.|+|||+++++.
T Consensus 200 ~~fD~Ii~NPPfg~~~~~-~~-------~-------~~~~~~----~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDD-EN-------A-------KTFELC----REEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CCEEEEEEECCCSEESCH-HH-------H-------TTSTTC----CSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCCCcCch-hh-------h-------hhcccc----CCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 567777776664221100 00 0 000000 00011222 357888999999999999866
No 241
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.09 E-value=2.6e-11 Score=95.87 Aligned_cols=100 Identities=8% Similarity=-0.036 Sum_probs=65.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC----ChHHHHHHHHHHHhcccCCCCCCccccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI----NRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~----s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 76 (167)
++|||+|||+|..+..+++ . .+++++|+ ++.+++... .+..+.
T Consensus 84 ~~VLDlGcG~G~~s~~la~-------------~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~----------------- 130 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGG-------------L-KNVREVKGLTKGGPGHEEPIP--MSTYGW----------------- 130 (305)
T ss_dssp EEEEEETCTTSHHHHHHHT-------------S-TTEEEEEEECCCSTTSCCCCC--CCSTTG-----------------
T ss_pred CEEEEEcCCCCHHHHHHHh-------------c-CCEEEEeccccCchhHHHHHH--hhhcCC-----------------
Confidence 3799999999999999887 2 46999998 454321100 000000
Q ss_pred CCCCCCCCceeeeeeccccccCCCCceEEeec-ccCCCCCCccchhhHhhhhccc---ccccHH---HHHHHHHHhcCCC
Q psy889 77 LPIESDSYSAYTIAFGIRNIDIPNPRLRFLEA-NAEELPIESDSYSAYTIAFGIR---NVTRID---KALSEAYRVLKPG 149 (167)
Q Consensus 77 l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v~~~~~~~---~~~~~~---~~l~~~~~~Lkpg 149 (167)
.++.+... |...++ ..+||+|+|...++ +..+.. .+|..++++||||
T Consensus 131 ------------------------~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpG 184 (305)
T 2p41_A 131 ------------------------NLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNN 184 (305)
T ss_dssp ------------------------GGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred ------------------------CCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCC
Confidence 24666666 665543 45799999865432 222222 5789999999999
Q ss_pred cEEEEEeecc
Q psy889 150 GRFLCLEFSH 159 (167)
Q Consensus 150 G~l~~~~~~~ 159 (167)
|.|++..+..
T Consensus 185 G~~v~kv~~~ 194 (305)
T 2p41_A 185 TQFCVKVLNP 194 (305)
T ss_dssp CEEEEEESCC
T ss_pred CEEEEEeCCC
Confidence 9999865543
No 242
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.09 E-value=3.5e-11 Score=93.24 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=72.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc--ccCCCCCCcccccccccccCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~l~ 78 (167)
.+|||+|||+|.++..++++ +.+++++|+++.+++.|++++... ..
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~-------------~~~v~~veid~~~i~~ar~~~~~~~~~~------------------- 121 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKY-------------DTHIDFVQADEKILDSFISFFPHFHEVK------------------- 121 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTS-------------SCEEEEECSCHHHHGGGTTTSTTHHHHH-------------------
T ss_pred CEEEEEeCCcCHHHHHHHhC-------------CCEEEEEECCHHHHHHHHHHHHhhcccc-------------------
Confidence 37999999999999988874 257999999999999998765321 00
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
...++.+...|..... ++||+|++.. .+...++++++++|+|||.+++..
T Consensus 122 --------------------~~~rv~~~~~D~~~~~---~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 122 --------------------NNKNFTHAKQLLDLDI---KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp --------------------TCTTEEEESSGGGSCC---CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred --------------------CCCeEEEEechHHHHH---hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 0146777777765543 6799998752 334458999999999999999853
No 243
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=1.5e-10 Score=89.41 Aligned_cols=102 Identities=8% Similarity=-0.019 Sum_probs=81.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||.|-++..++... +..+|+++|+++.+++.+++++...+.
T Consensus 134 ~~VLDLGCG~GpLAl~~~~~~-----------p~a~y~a~DId~~~le~a~~~l~~~g~--------------------- 181 (281)
T 3lcv_B 134 NTLRDLACGLNPLAAPWMGLP-----------AETVYIASDIDARLVGFVDEALTRLNV--------------------- 181 (281)
T ss_dssp SEEEETTCTTGGGCCTTTTCC-----------TTCEEEEEESBHHHHHHHHHHHHHTTC---------------------
T ss_pred ceeeeeccCccHHHHHHHhhC-----------CCCEEEEEeCCHHHHHHHHHHHHhcCC---------------------
Confidence 379999999999999887754 378999999999999999999987664
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH--HHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
...+...|....+ ..+.||+++++-+++++.+. ...+ ++++.|+++|.++..+.
T Consensus 182 ---------------------~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 182 ---------------------PHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp ---------------------CEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred ---------------------CceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 3566666665433 45779999999998888664 2445 99999999999987553
No 244
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.04 E-value=7.2e-10 Score=87.79 Aligned_cols=130 Identities=8% Similarity=-0.018 Sum_probs=81.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++..+. ...+++++|+++.+++.++++++..+. .++++..+|+..++..
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~----------~~g~V~a~D~~~~~l~~~~~n~~r~g~-----~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLK----------NQGKIFAFDLDAKRLASMATLLARAGV-----SCCELAEEDFLAVSPS 168 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGGSCTT
T ss_pred CEEEEeCCChhHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEEEeCChHhcCcc
Confidence 4799999999999999998874 257899999999999999999987664 3577888887776533
Q ss_pred C---CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 S---DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~---~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
. ..||.+.+..+-+.......+ .|.... .....-++.- .......++..+.++++ ||+|+++++
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r~-----pd~~~~-~~~~~~~~~~------l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSRQ-----LEEPGA-GTPSPVRLHA------LAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------------------------CCHHH------HHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred ccccCCCCEEEEcCCcCCCCCCccC-----CChhhh-ccCCHHHHHH------HHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 2 457766665554332110000 000000 0000000000 01223567888888887 999988765
Q ss_pred c
Q psy889 158 S 158 (167)
Q Consensus 158 ~ 158 (167)
+
T Consensus 236 s 236 (309)
T 2b9e_A 236 S 236 (309)
T ss_dssp C
T ss_pred C
Confidence 5
No 245
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.04 E-value=4.9e-10 Score=85.64 Aligned_cols=99 Identities=14% Similarity=-0.035 Sum_probs=79.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||.|-++..++ . ..+|+++|+++.+++.+++++...+
T Consensus 107 ~~VLDlGCG~gpLal~~~---~-----------~~~y~a~DId~~~i~~ar~~~~~~g---------------------- 150 (253)
T 3frh_A 107 RRVLDIACGLNPLALYER---G-----------IASVWGCDIHQGLGDVITPFAREKD---------------------- 150 (253)
T ss_dssp SEEEEETCTTTHHHHHHT---T-----------CSEEEEEESBHHHHHHHHHHHHHTT----------------------
T ss_pred CeEEEecCCccHHHHHhc---c-----------CCeEEEEeCCHHHHHHHHHHHHhcC----------------------
Confidence 379999999999999887 2 7889999999999999999976654
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH-HHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.+..+...|....+.+ +.||++++.-+++++.+. +....++.+.|+++|.++...
T Consensus 151 --------------------~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 151 --------------------WDFTFALQDVLCAPPA-EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp --------------------CEEEEEECCTTTSCCC-CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred --------------------CCceEEEeecccCCCC-CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 3567777787766654 489999998888887653 334448999999999888654
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.03 E-value=6.1e-10 Score=87.70 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=50.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+. +++++..+|+..+++.
T Consensus 44 ~~VLDiG~G~G~lt~~La~~-------------~~~v~~vDi~~~~~~~a~~~~~~~~~-----~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPL-------------AKKVITIDIDSRMISEVKKRCLYEGY-----NNLEVYEGDAIKTVFP 105 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTT-------------SSEEEEECSCHHHHHHHHHHHHHTTC-----CCEEC----CCSSCCC
T ss_pred CEEEEEcCcCcHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECchhhCCcc
Confidence 37999999999999999873 56899999999999999998864432 3566666666655443
Q ss_pred CCCCceeeeeec
Q psy889 81 SDSYSAYTIAFG 92 (167)
Q Consensus 81 ~~~fd~~~~~~~ 92 (167)
.||.+.+..+
T Consensus 106 --~~D~Vv~n~p 115 (299)
T 2h1r_A 106 --KFDVCTANIP 115 (299)
T ss_dssp --CCSEEEEECC
T ss_pred --cCCEEEEcCC
Confidence 4555544433
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.99 E-value=1.4e-09 Score=89.60 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=68.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++...+.
T Consensus 292 ~~VLDlgcG~G~~sl~la~~-------------~~~V~gvD~s~~ai~~A~~n~~~ngl--------------------- 337 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKR-------------GFNVKGFDSNEFAIEMARRNVEINNV--------------------- 337 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTC---------------------
T ss_pred CEEEEeeccchHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCC---------------------
Confidence 37999999999999999873 56899999999999999999876554
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccH-HHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~ 156 (167)
. +.+...|..+.... .||+|++.-.- ... ..+++.+ +.|+|+|.+++++
T Consensus 338 --------------------~-v~~~~~d~~~~~~~--~fD~Vv~dPPr---~g~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 338 --------------------D-AEFEVASDREVSVK--GFDTVIVDPPR---AGLHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp --------------------C-EEEEECCTTTCCCT--TCSEEEECCCT---TCSCHHHHHHH-HHHCCSEEEEEES
T ss_pred --------------------c-EEEEECChHHcCcc--CCCEEEEcCCc---cchHHHHHHHH-HhcCCCcEEEEEC
Confidence 3 56666666654322 67877763211 112 2344444 4589999998853
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.98 E-value=4e-10 Score=88.51 Aligned_cols=26 Identities=15% Similarity=0.027 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 135 IDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 135 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
...++++++++|||||.|++..+...
T Consensus 150 ~~~~l~~a~r~LkpGG~~v~~~~~~~ 175 (290)
T 2xyq_A 150 FTYLCGFIKQKLALGGSIAVKITEHS 175 (290)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 45789999999999999999766543
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.96 E-value=2.2e-09 Score=88.58 Aligned_cols=58 Identities=22% Similarity=0.186 Sum_probs=46.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 76 (167)
.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+. .++++..+|+.+
T Consensus 288 ~~VLDlgcG~G~~~~~la~~-------------~~~V~gvD~s~~al~~A~~n~~~~~~-----~~v~f~~~d~~~ 345 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQ-------------AASVVGVEGVPALVEKGQQNARLNGL-----QNVTFYHENLEE 345 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCTTS
T ss_pred CEEEECCCCCCHHHHHHHhh-------------CCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEECCHHH
Confidence 37999999999999999873 56899999999999999999876554 145555555544
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.94 E-value=1.1e-09 Score=90.63 Aligned_cols=133 Identities=9% Similarity=-0.043 Sum_probs=82.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCC--CCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLS--EHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 78 (167)
.+|||+|||+|.+...+++++......... .....+++|+|+++.+++.|+.++...+. ...+.+...+|....+
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~---~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI---GTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC---CSSCCSEEECCTTTSC
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC---CcCCCCEeeCCCCCCc
Confidence 379999999999999998875210000000 00136799999999999999998865553 1114567777776665
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
... .||.++..+|.......... +...+ .... .-......+..++++|+|||++.++.
T Consensus 250 ~~~-~fD~Iv~NPPf~~~~~~~~~--~~~~~---~~~~--------------~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 250 PST-LVDVILANPPFGTRPAGSVD--INRPD---FYVE--------------TKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CSS-CEEEEEECCCSSCCCTTCCC--CCCTT---SSSC--------------CSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC-CcCEEEECCCCCCcccccch--hhHhh---cCCC--------------CcchHHHHHHHHHHHhccCCEEEEEE
Confidence 433 78888888777543322110 00000 0000 01112356788999999999998866
No 251
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.92 E-value=4.8e-10 Score=90.66 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=44.8
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccccccc
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE 76 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 76 (167)
+|||+|||+|.++..+++. ..+++++|+++.+++.|+++++..+. .++++..+|+++
T Consensus 216 ~vLDl~cG~G~~~l~la~~-------------~~~V~gvd~~~~ai~~a~~n~~~ng~-----~~v~~~~~d~~~ 272 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALARN-------------FDRVLATEIAKPSVAAAQYNIAANHI-----DNVQIIRMAAEE 272 (369)
T ss_dssp EEEEESCTTSHHHHHHGGG-------------SSEEEEECCCHHHHHHHHHHHHHTTC-----CSEEEECCCSHH
T ss_pred EEEEccCCCCHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECCHHH
Confidence 6999999999999998873 46899999999999999999876554 234455444433
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=6.5e-10 Score=85.06 Aligned_cols=61 Identities=13% Similarity=0.186 Sum_probs=50.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++... .+++++..+|+.+++++
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQR-------------CNFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDILQFKFP 91 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCGGGCCCC
T ss_pred CEEEEEeCCchHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHhhcc-------CCCeEEEEChHHhCCcc
Confidence 37999999999999999884 46799999999999999987642 13678888888887765
Q ss_pred C
Q psy889 81 S 81 (167)
Q Consensus 81 ~ 81 (167)
.
T Consensus 92 ~ 92 (244)
T 1qam_A 92 K 92 (244)
T ss_dssp S
T ss_pred c
Confidence 3
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.89 E-value=5.3e-09 Score=85.37 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=73.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCC----CC-----------------------CCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPN----TL-----------------------SEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~----~~-----------------------~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+|||++||+|.++..++......++. .. ......+++|+|+++.+++.|++++
T Consensus 204 ~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na 283 (393)
T 3k0b_A 204 PFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNA 283 (393)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHH
Confidence 69999999999998887765321100 00 0001357999999999999999999
Q ss_pred HhcccCCCCCCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcc--c--
Q psy889 55 RDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGI--R-- 130 (167)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~--~-- 130 (167)
...+. ..++.+...|..+++.. .+||+|+++--+ .
T Consensus 284 ~~~gl----------------------------------------~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~ 322 (393)
T 3k0b_A 284 VEAGL----------------------------------------GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLE 322 (393)
T ss_dssp HHTTC----------------------------------------TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHH
T ss_pred HHcCC----------------------------------------CCceEEEECChHhCCCC-CCCCEEEECCCCccccC
Confidence 87765 13466667776665543 467888776221 1
Q ss_pred ccccHHHHHHHHHHhcCC--CcEEEEEe
Q psy889 131 NVTRIDKALSEAYRVLKP--GGRFLCLE 156 (167)
Q Consensus 131 ~~~~~~~~l~~~~~~Lkp--gG~l~~~~ 156 (167)
.......+.+++.++||+ ||.++++.
T Consensus 323 ~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 323 DEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 112344455555566655 88888765
No 254
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.87 E-value=1.7e-09 Score=87.81 Aligned_cols=115 Identities=17% Similarity=0.059 Sum_probs=72.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|..+..++...+ ..+++++|+++.+++.++++++..... .. .
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~-----------~~~V~avDi~~~av~~a~~N~~~n~~~-~~---------~------- 100 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETP-----------AEEVWLNDISEDAYELMKRNVMLNFDG-EL---------R------- 100 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSS-----------CSEEEEEESCHHHHHHHHHHHHHHCCS-CC---------E-------
T ss_pred CEEEECCCchhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHHhccc-cc---------c-------
Confidence 3799999999999999998763 567999999999999999999765100 00 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCC-CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
.+.+..+. .+ -.++.+...|..... .....||+|++.- ......++..+.+.|++||.++++.
T Consensus 101 ~~~~~~~~--~g-------l~~i~v~~~Da~~~~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 101 ESKGRAIL--KG-------EKTIVINHDDANRLMAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp ECSSEEEE--ES-------SSEEEEEESCHHHHHHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccccc--cC-------CCceEEEcCcHHHHHHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 00000000 00 012555555554321 1124578876421 1123577888999999999887753
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.86 E-value=1.3e-08 Score=82.85 Aligned_cols=114 Identities=9% Similarity=0.042 Sum_probs=74.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCC----CCC-----------------------CCCCCcEEEeeCChHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPN----TLS-----------------------EHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~----~~~-----------------------~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+|+|.+||+|.+....+.......+. ..- .....+++|+|+++.+++.|++++
T Consensus 197 ~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na 276 (384)
T 3ldg_A 197 PFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNA 276 (384)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHH
T ss_pred eEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHH
Confidence 68999999999999887755321100 000 001256999999999999999999
Q ss_pred HhcccCCCCCCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc----
Q psy889 55 RDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR---- 130 (167)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~---- 130 (167)
...+. ..++.+...|..+++.. ..||+|+++--+.
T Consensus 277 ~~~gl----------------------------------------~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~ 315 (384)
T 3ldg_A 277 REVGL----------------------------------------EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLL 315 (384)
T ss_dssp HHTTC----------------------------------------TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTS
T ss_pred HHcCC----------------------------------------CCceEEEECChHHCCcc-CCcCEEEECCchhhccC
Confidence 87765 13466666666665443 3677777752211
Q ss_pred ccccHHHHHHHHHHhcCC--CcEEEEEe
Q psy889 131 NVTRIDKALSEAYRVLKP--GGRFLCLE 156 (167)
Q Consensus 131 ~~~~~~~~l~~~~~~Lkp--gG~l~~~~ 156 (167)
...+...+.+++.++||+ ||.++++.
T Consensus 316 ~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 316 DDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 123455566666777766 88888765
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.84 E-value=8.8e-09 Score=83.82 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=75.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCC----CC-----------------------CCCCCCcEEEeeCChHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPN----TL-----------------------SEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~----~~-----------------------~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
.+|||++||+|.++..++.......+. .. ......+++|+|+++.+++.|+++
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~N 276 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAREN 276 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHH
Confidence 369999999999999988765311100 00 000125799999999999999999
Q ss_pred HHhcccCCCCCCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc---
Q psy889 54 ARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR--- 130 (167)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~--- 130 (167)
+...+. ...+.+...|..+++.. ..||+|+++--+.
T Consensus 277 a~~~gl----------------------------------------~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl 315 (385)
T 3ldu_A 277 AEIAGV----------------------------------------DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERL 315 (385)
T ss_dssp HHHHTC----------------------------------------GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSH
T ss_pred HHHcCC----------------------------------------CCceEEEECChhhcCcC-CCCcEEEECCCCcCcc
Confidence 987665 12466777776665443 4678887743322
Q ss_pred -ccccHHHHHHHHHHhcCC--CcEEEEEe
Q psy889 131 -NVTRIDKALSEAYRVLKP--GGRFLCLE 156 (167)
Q Consensus 131 -~~~~~~~~l~~~~~~Lkp--gG~l~~~~ 156 (167)
...+...+.+++.++||+ |+.++++.
T Consensus 316 ~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 316 EDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 123345566666677766 88887765
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.82 E-value=3.3e-11 Score=92.07 Aligned_cols=59 Identities=8% Similarity=0.236 Sum_probs=47.0
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. ..+++++..+|+.+++++
T Consensus 32 ~VLDiG~G~G~~~~~l~~~-------------~~~v~~id~~~~~~~~a~~~~~-------~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAKI-------------SKQVTSIELDSHLFNLSSEKLK-------LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp EEEECSCCCSSCSHHHHHH-------------SSEEEESSSSCSSSSSSSCTTT-------TCSEEEECCSCCTTTTCC
T ss_pred EEEEEeCCCCHHHHHHHHh-------------CCeEEEEECCHHHHHHHHHHhc-------cCCceEEEECChhhcCcc
Confidence 7999999999999999884 4679999999999988876653 124567777777776654
No 258
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.81 E-value=9.8e-09 Score=80.78 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=64.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++.. .+++++..+|+.+++++
T Consensus 52 ~~VLEIG~G~G~lT~~La~~-------------~~~V~aVEid~~li~~a~~~~~~-------~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 52 DVVLEIGLGKGILTEELAKN-------------AKKVYVIEIDKSLEPYANKLKEL-------YNNIEIIWGDALKVDLN 111 (295)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEEESCGGGHHHHHHHHHH-------CSSEEEEESCTTTSCGG
T ss_pred CEEEEECCCchHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHhcc-------CCCeEEEECchhhCCcc
Confidence 37999999999999999984 46899999999999999998862 24789999999999988
Q ss_pred CCCCceeeeeecc
Q psy889 81 SDSYSAYTIAFGI 93 (167)
Q Consensus 81 ~~~fd~~~~~~~~ 93 (167)
...||.++...+.
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 8889999988775
No 259
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.77 E-value=6.4e-09 Score=84.81 Aligned_cols=100 Identities=12% Similarity=-0.001 Sum_probs=72.0
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCC-CcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
+|||++||+|.++..++.... + .+++++|+++.+++.++++++..+.
T Consensus 55 ~VLDlfaGtG~~sl~aa~~~~-----------ga~~V~avDi~~~av~~~~~N~~~Ngl--------------------- 102 (392)
T 3axs_A 55 KVADPLSASGIRAIRFLLETS-----------CVEKAYANDISSKAIEIMKENFKLNNI--------------------- 102 (392)
T ss_dssp EEEESSCTTSHHHHHHHHHCS-----------CEEEEEEECSCHHHHHHHHHHHHHTTC---------------------
T ss_pred EEEECCCcccHHHHHHHHhCC-----------CCCEEEEEECCHHHHHHHHHHHHHhCC---------------------
Confidence 799999999999999998652 4 5899999999999999999987654
Q ss_pred CCCCceeeeeeccccccCCCCc-eEEeecccCCCC--CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPR-LRFLEANAEELP--IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~--~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
..+ +.+...|..... .....||+|++.- ......++..+.+.|++||+++++.
T Consensus 103 -------------------~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 103 -------------------PEDRYEIHGMEANFFLRKEWGFGFDYVDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -------------------CGGGEEEECSCHHHHHHSCCSSCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------------------CCceEEEEeCCHHHHHHHhhCCCCcEEEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 012 555555543321 1134578776632 1123457888999999999887754
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.76 E-value=3.8e-09 Score=85.09 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=38.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
.+||++|||+|.++..++++. ..+++++|+++.+++.|++++.
T Consensus 190 krVL~IGgG~G~~arellk~~------------~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 190 KDVLILGGGDGGILCEIVKLK------------PKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp CEEEEEECTTCHHHHHHHTTC------------CSEEEEEESCHHHHHHHHHHCC
T ss_pred CEEEEEECChhHHHHHHHHCC------------CCEEEEEECCHHHHHHHHHHHH
Confidence 389999999999999998764 4789999999999999998864
No 261
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.70 E-value=9.6e-09 Score=83.66 Aligned_cols=122 Identities=16% Similarity=0.082 Sum_probs=73.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..++++.. ...+++|+|+++.+++.| .++++..+|+...+. .
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~----------~~~~i~gvDi~~~~~~~a--------------~~~~~~~~D~~~~~~-~ 96 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHG----------TAYRFVGVEIDPKALDLP--------------PWAEGILADFLLWEP-G 96 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHC----------SCSEEEEEESCTTTCCCC--------------TTEEEEESCGGGCCC-S
T ss_pred EEEECCCCChHHHHHHHHHhC----------CCCeEEEEECCHHHHHhC--------------CCCcEEeCChhhcCc-c
Confidence 799999999999999998763 257899999999998766 245667777766543 3
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhh-hccc-ccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIA-FGIR-NVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
+.||.+++.++......... ... + .....-+.+-.. ..+. .......++.++.++|+|||+++++..
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~-~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASK-YPI------H--VFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTT-CSB------C--CCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEECcCccCcccccc-ccc------c--cCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 56777777766643211000 000 0 000000000000 0000 011234678899999999999998654
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.69 E-value=3.6e-08 Score=76.64 Aligned_cols=72 Identities=15% Similarity=0.041 Sum_probs=59.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+|||+|||+|.++..+++. +.+++++|+++.+++.+++++. ..++++..+|+.+++++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~-------------~~~V~avEid~~~~~~l~~~~~--------~~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA-------------GAEVTAIEKDLRLRPVLEETLS--------GLPVRLVFQDALLYPWEE 107 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT-------------TCCEEEEESCGGGHHHHHHHTT--------TSSEEEEESCGGGSCGGG
T ss_pred eEEEEeCchHHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhcC--------CCCEEEEECChhhCChhh
Confidence 6999999999999999983 5789999999999999998764 247899999999988764
Q ss_pred C-CCceeeeeeccc
Q psy889 82 D-SYSAYTIAFGIR 94 (167)
Q Consensus 82 ~-~fd~~~~~~~~~ 94 (167)
. .|+.++...+..
T Consensus 108 ~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 108 VPQGSLLVANLPYH 121 (271)
T ss_dssp SCTTEEEEEEECSS
T ss_pred ccCccEEEecCccc
Confidence 3 677777777653
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.68 E-value=3e-08 Score=76.39 Aligned_cols=72 Identities=8% Similarity=0.102 Sum_probs=57.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++. +.+++++|+++.+++.+++++.. .+++++..+|+.+++++
T Consensus 31 ~~VLEIG~G~G~lt~~La~~-------------~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 31 DTLVEIGPGRGALTDYLLTE-------------CDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQNDALQFDFS 90 (255)
T ss_dssp CEEEEECCTTTTTHHHHTTT-------------SSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESCTTTCCGG
T ss_pred CEEEEEcccccHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcchHhCCHH
Confidence 37999999999999999873 57899999999999999988753 24788999999998754
Q ss_pred C----CCCceeeeeecc
Q psy889 81 S----DSYSAYTIAFGI 93 (167)
Q Consensus 81 ~----~~fd~~~~~~~~ 93 (167)
. ..|+ ++.+.+.
T Consensus 91 ~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp GSCCSSCEE-EEEECCH
T ss_pred HhccCCCeE-EEecCCc
Confidence 3 4465 5555544
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.67 E-value=1.8e-08 Score=85.27 Aligned_cols=134 Identities=7% Similarity=-0.116 Sum_probs=80.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCC--CC-----CCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNT--LS-----EHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN 73 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~--~~-----~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d 73 (167)
.+|+|.|||+|.+...+++++....... .+ ......++|+|+++.++..|+.++...+....+..+.....+|
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gD 250 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGN 250 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESC
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCC
Confidence 4799999999999999988763110000 00 0002479999999999999999886554311001124566666
Q ss_pred cccCC-CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEE
Q psy889 74 AEELP-IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 74 ~~~l~-~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 152 (167)
....+ .....||.++..+|......... ..+ ...+.. ..-...+..+.++|+|||++
T Consensus 251 tL~~~~~~~~~fD~Vv~NPPf~~~~~~~~-----~~~---~~~~~~--------------~~~~~Fl~~~l~~Lk~gGr~ 308 (541)
T 2ar0_A 251 TLGSDGENLPKAHIVATNPPFGSAAGTNI-----TRT---FVHPTS--------------NKQLCFMQHIIETLHPGGRA 308 (541)
T ss_dssp TTSHHHHTSCCEEEEEECCCCTTCSSCCC-----CSC---CSSCCS--------------CHHHHHHHHHHHHEEEEEEE
T ss_pred CcccccccccCCeEEEECCCcccccchhh-----Hhh---cCCCCC--------------chHHHHHHHHHHHhCCCCEE
Confidence 55433 44567888888887754332210 000 000000 11124577889999999999
Q ss_pred EEEe
Q psy889 153 LCLE 156 (167)
Q Consensus 153 ~~~~ 156 (167)
.++.
T Consensus 309 a~V~ 312 (541)
T 2ar0_A 309 AVVV 312 (541)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8865
No 265
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.67 E-value=3.9e-08 Score=79.68 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=23.2
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeecccC
Q psy889 134 RIDKALSEAYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 134 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (167)
|...+|+..++.|+|||++++...+..+
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4455688889999999999998887765
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.66 E-value=1.4e-08 Score=80.03 Aligned_cols=79 Identities=14% Similarity=0.231 Sum_probs=65.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
.+|||+|||+|.++..+++.+ .+.+++++|.|+.+++.|++++...+ +++++..+|+..++
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~-----------~~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHC-----------PGCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSYREADFL 90 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-----------TTCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCGGGHHHH
T ss_pred CEEEEEeCCcCHHHHHHHHHC-----------CCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCHHHHHHH
Confidence 379999999999999999976 26789999999999999999886543 47899999998876
Q ss_pred CC---CCCCceeeeeeccccc
Q psy889 79 IE---SDSYSAYTIAFGIRNI 96 (167)
Q Consensus 79 ~~---~~~fd~~~~~~~~~~~ 96 (167)
+. ...||.+++..+.+..
T Consensus 91 l~~~g~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDLGVSTY 111 (301)
T ss_dssp HHHTTCSCEEEEEEECSCCHH
T ss_pred HHhcCCCCCCEEEEcCccchh
Confidence 22 2679999988876543
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.63 E-value=9.8e-08 Score=83.14 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=42.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCC-----CC--------------------------CCCCcEEEeeCChHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTL-----SE--------------------------HCAPHVTVADINRAMLDVG 50 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~-----~~--------------------------~~~~~~~~~D~s~~~~~~a 50 (167)
+|||.+||+|.+...++.......+... -+ ....+++|+|+++.+++.|
T Consensus 193 ~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A 272 (703)
T 3v97_A 193 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRA 272 (703)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHH
T ss_pred eEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHH
Confidence 6999999999999988775421111000 00 0135799999999999999
Q ss_pred HHHHHhccc
Q psy889 51 EQRARDLFK 59 (167)
Q Consensus 51 ~~~~~~~~~ 59 (167)
++++...+.
T Consensus 273 ~~N~~~agv 281 (703)
T 3v97_A 273 RTNARLAGI 281 (703)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999988776
No 268
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.55 E-value=5.1e-08 Score=79.89 Aligned_cols=77 Identities=12% Similarity=-0.020 Sum_probs=63.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc--ccCCCCCCcccccccccccC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEEL- 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~l- 77 (167)
.+|||+|||+|..+..+++ .+.+++++|+|+.+++.++++++.. +. .++++..+|+.+.
T Consensus 95 ~~VLDLgcG~G~~al~LA~-------------~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-----~~i~~i~~Da~~~L 156 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMS-------------KASQGIYIERNDETAVAARHNIPLLLNEG-----KDVNILTGDFKEYL 156 (410)
T ss_dssp CEEEESSCSSSHHHHHHHT-------------TCSEEEEEESCHHHHHHHHHHHHHHSCTT-----CEEEEEESCGGGSH
T ss_pred CEEEEeCCCchHHHHHHHh-------------cCCEEEEEECCHHHHHHHHHhHHHhccCC-----CcEEEEECcHHHhh
Confidence 3799999999999999887 3578999999999999999999765 32 4688999998874
Q ss_pred C-CCCCCCceeeeeecccc
Q psy889 78 P-IESDSYSAYTIAFGIRN 95 (167)
Q Consensus 78 ~-~~~~~fd~~~~~~~~~~ 95 (167)
+ +....||.+.+.++.+.
T Consensus 157 ~~~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 157 PLIKTFHPDYIYVDPARRS 175 (410)
T ss_dssp HHHHHHCCSEEEECCEEC-
T ss_pred hhccCCCceEEEECCCCcC
Confidence 4 24568999999888875
No 269
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.55 E-value=4.5e-08 Score=76.25 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=62.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC---
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~--- 78 (167)
.++|.+||.|+++..+++. +++++|+|.++.+++.+++ +.. ++++++.+++.+++
T Consensus 25 ~~VD~T~G~GGHS~~il~~-------------~g~VigiD~Dp~Ai~~A~~-L~~--------~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 25 VYVDATLGGAGHARGILER-------------GGRVIGLDQDPEAVARAKG-LHL--------PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp EEEETTCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHH-TCC--------TTEEEEESCGGGHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHC-------------CCEEEEEeCCHHHHHHHHh-hcc--------CCEEEEECCcchHHHHH
Confidence 6899999999999999984 4689999999999999987 532 47899999999985
Q ss_pred --CCCCCCceeeeeecccccc
Q psy889 79 --IESDSYSAYTIAFGIRNID 97 (167)
Q Consensus 79 --~~~~~fd~~~~~~~~~~~~ 97 (167)
...+.+|.+....|.+.+.
T Consensus 83 ~~~g~~~vDgIL~DLGvSS~Q 103 (285)
T 1wg8_A 83 AALGVERVDGILADLGVSSFH 103 (285)
T ss_dssp HHTTCSCEEEEEEECSCCHHH
T ss_pred HHcCCCCcCEEEeCCcccccc
Confidence 3346799999988887764
No 270
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.52 E-value=3.9e-08 Score=79.91 Aligned_cols=158 Identities=11% Similarity=0.001 Sum_probs=71.9
Q ss_pred CeEEeeecCCCchHHHHHHhh----ccCCCC--CCCCCCCCcEEEeeCC-----------hHHHHHHHHHHHhcccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYV----DKLPPN--TLSEHCAPHVTVADIN-----------RAMLDVGEQRARDLFKVPVP 63 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~----~~~~~~--~~~~~~~~~~~~~D~s-----------~~~~~~a~~~~~~~~~~~~~ 63 (167)
++|+|+||++|..|+.++..+ ...-.. ....++..+++..|+. +.+.+..++.... .. +
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~-~~---~ 129 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR-KI---G 129 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC-CT---T
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC-CC---C
Confidence 479999999999999887762 110000 0001245678888987 4443333221100 00 0
Q ss_pred CCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEE---eecccCCCCCCccchhhHhhhhcccccccHHHHHH
Q psy889 64 NPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRF---LEANAEELPIESDSYSAYTIAFGIRNVTRIDKALS 140 (167)
Q Consensus 64 ~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~ 140 (167)
.-.+.-+.+++.+-.|+.++||++-.+..++=+......+.= ...+-..+.....+-..|.-.+.-..-.|...+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 012222334444444555555555555555433221111000 00000000000000011111100011234445577
Q ss_pred HHHHhcCCCcEEEEEeecccCC
Q psy889 141 EAYRVLKPGGRFLCLEFSHVNN 162 (167)
Q Consensus 141 ~~~~~LkpgG~l~~~~~~~~~~ 162 (167)
..++.|+|||++++...+..+.
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHhccCCeEEEEEecCCCc
Confidence 7799999999999988877654
No 271
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.50 E-value=1.8e-07 Score=75.45 Aligned_cols=135 Identities=12% Similarity=0.128 Sum_probs=80.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCC-CCCcccccccccccCC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPV-PNPRLRFLEANAEELP- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~l~- 78 (167)
++|||+|+|.|+-|.+++.... ...+++.|+++.-+...++++++.+.... ...+++....|...++
T Consensus 150 ~~VLD~CAaPGGKT~~la~~~~-----------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 150 DIVLDLCAAPGGKTLALLQTGC-----------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp EEEEESSCTTCHHHHHHHHTTC-----------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred CEEEEecCCccHHHHHHHHhcC-----------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 4799999999999999988652 56799999999999999999987654211 1134555555655543
Q ss_pred CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccc-cHHHHHHHHHHhcCCCcEEEEEee
Q psy889 79 IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVT-RIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 79 ~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
...+.||.+++.-+=+... .....-+ .+.... ...+-+ ..+. -..++|..+.+.|||||+|+++++
T Consensus 219 ~~~~~fD~VLlDaPCSg~g-----~g~~r~~-~~~~~~-~~~~~~------~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDR-----HSLHEEE-NNIFKR-SRKKER------QILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp HSTTCEEEEEEECCCCCHH-----HHTTCCT-TCTTSG-GGHHHH------HTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred hccccCCEEEECCccCCCC-----CcccccC-hhhhhh-CCHHHH------HHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 4455666555443322100 0000000 000000 000000 0111 235788999999999999999776
Q ss_pred cc
Q psy889 158 SH 159 (167)
Q Consensus 158 ~~ 159 (167)
+-
T Consensus 286 Sl 287 (359)
T 4fzv_A 286 SL 287 (359)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.48 E-value=7.8e-07 Score=66.22 Aligned_cols=111 Identities=9% Similarity=-0.053 Sum_probs=66.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC---
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l--- 77 (167)
.+|||+||| ..|..+++ . .+++++.+|.+++..+.++++++..+. ++..++++..+++.+.
T Consensus 32 ~~VLEiGtG--ySTl~lA~-~-----------~~g~VvtvE~d~~~~~~ar~~l~~~g~--~~~~~I~~~~gda~~~~~w 95 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAE-L-----------PGKHVTSVESDRAWARMMKAWLAANPP--AEGTEVNIVWTDIGPTGDW 95 (202)
T ss_dssp SEEEEESCS--HHHHHHHT-S-----------TTCEEEEEESCHHHHHHHHHHHHHSCC--CTTCEEEEEECCCSSBCGG
T ss_pred CEEEEECch--HHHHHHHH-c-----------CCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCCceEEEEeCchhhhcc
Confidence 479999985 55555555 2 268899999999999999999987652 0123444444443321
Q ss_pred --CCCCCCCceeeeeeccccccCCCCceEEeecccCCC-----CC-CccchhhHhhhhcccccccHHHHHHHHHHhcCCC
Q psy889 78 --PIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-----PI-ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG 149 (167)
Q Consensus 78 --~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~-~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~Lkpg 149 (167)
|.+...++ .+..+ .. ..+.||+|++-.- + ....+..+.+.|+||
T Consensus 96 g~p~~~~~~~-----------------------~l~~~~~~i~~~~~~~~fDlIfIDg~----k-~~~~~~~~l~~l~~G 147 (202)
T 3cvo_A 96 GHPVSDAKWR-----------------------SYPDYPLAVWRTEGFRHPDVVLVDGR----F-RVGCALATAFSITRP 147 (202)
T ss_dssp GCBSSSTTGG-----------------------GTTHHHHGGGGCTTCCCCSEEEECSS----S-HHHHHHHHHHHCSSC
T ss_pred cccccchhhh-----------------------hHHHHhhhhhccccCCCCCEEEEeCC----C-chhHHHHHHHhcCCC
Confidence 01100000 00000 01 1356899887432 1 125566677999999
Q ss_pred cEEEEE
Q psy889 150 GRFLCL 155 (167)
Q Consensus 150 G~l~~~ 155 (167)
|++++-
T Consensus 148 G~Iv~D 153 (202)
T 3cvo_A 148 VTLLFD 153 (202)
T ss_dssp EEEEET
T ss_pred eEEEEe
Confidence 999773
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.48 E-value=2.2e-07 Score=72.43 Aligned_cols=62 Identities=13% Similarity=0.065 Sum_probs=51.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCC-CCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
.+|||+|||+|.++..+++... . ..+++++|+++.+++.++++. . +++++..+|+.++++
T Consensus 44 ~~VLEIG~G~G~lt~~La~~~~----------~~~~~V~avDid~~~l~~a~~~~---~------~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 44 ERMVEIGPGLGALTGPVIARLA----------TPGSPLHAVELDRDLIGRLEQRF---G------ELLELHAGDALTFDF 104 (279)
T ss_dssp CEEEEECCTTSTTHHHHHHHHC----------BTTBCEEEEECCHHHHHHHHHHH---G------GGEEEEESCGGGCCG
T ss_pred CEEEEEccccHHHHHHHHHhCC----------CcCCeEEEEECCHHHHHHHHHhc---C------CCcEEEECChhcCCh
Confidence 4799999999999999998763 1 245999999999999999883 1 368899999999886
Q ss_pred CC
Q psy889 80 ES 81 (167)
Q Consensus 80 ~~ 81 (167)
+.
T Consensus 105 ~~ 106 (279)
T 3uzu_A 105 GS 106 (279)
T ss_dssp GG
T ss_pred hH
Confidence 43
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.46 E-value=5e-08 Score=75.28 Aligned_cols=77 Identities=12% Similarity=-0.031 Sum_probs=59.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCCh-------HHHHHHHHHHHhcccCCCCCCcccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR-------AMLDVGEQRARDLFKVPVPNPRLRFLEAN 73 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~~~d 73 (167)
.+|||+|||+|.++..++.. +.+++++|+++ .+++.++++.+..+. ..++++..+|
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~-------------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~----~~ri~~~~~d 147 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASL-------------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT----AARINLHFGN 147 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHT-------------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH----HTTEEEEESC
T ss_pred CeEEEeeCccCHHHHHHHHh-------------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC----ccCeEEEECC
Confidence 37999999999999999883 56899999999 999999887654432 1257888888
Q ss_pred cccC-C-CCC--CCCceeeeeeccc
Q psy889 74 AEEL-P-IES--DSYSAYTIAFGIR 94 (167)
Q Consensus 74 ~~~l-~-~~~--~~fd~~~~~~~~~ 94 (167)
++++ + ++. +.||.+.+.++..
T Consensus 148 ~~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 148 AAEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHHHhhhccCCCccEEEECCCCC
Confidence 8774 3 444 6788877765553
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.45 E-value=4.3e-07 Score=71.23 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=72.8
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+||-+|.|.|..++.++++. ...+++.+|+++..++.+++.+..........
T Consensus 86 ~VLIiGgGdG~~~revlk~~-----------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~d----------------- 137 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHK-----------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDD----------------- 137 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCT-----------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC-----------------
T ss_pred eEEEECCCchHHHHHHHHcC-----------CcceEEEEcCCHHHHHHHHhcCccccccccCC-----------------
Confidence 79999999999999999876 36789999999999999998765432111111
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhcccc-cc---cHHHHHHHHHHhcCCCcEEEEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRN-VT---RIDKALSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~-~~---~~~~~l~~~~~~LkpgG~l~~~ 155 (167)
.++.+...|.... .....+||+|+.-..-.. .. ..+..++.+++.|+|||.++.-
T Consensus 138 -------------------pRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 138 -------------------PRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -------------------TTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred -------------------CcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 4555555555432 233456777765321100 00 1356788999999999999873
No 276
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.36 E-value=1.3e-07 Score=76.18 Aligned_cols=155 Identities=8% Similarity=-0.046 Sum_probs=78.9
Q ss_pred CeEEeeecCCCchHHHHHHhh--------ccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYV--------DKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA 72 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 72 (167)
++|+|+||++|..|+.+...+ .+... +.++..+++..|+........-+.+..... ..+.-.+.-+.+
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~---~~~pe~~v~~nDLp~NDFntlF~~L~~~~~-~~~~~f~~gvpg 128 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGR---ENSPEYQIFLNDLPGNDFNAIFRSLPIEND-VDGVCFINGVPG 128 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSC---SSCCEEEEEEEECTTSCHHHHHTTTTTSCS-CTTCEEEEEEES
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCC---CCCCceEEEecCCCchHHHHHHHhcchhcc-cCCCEEEEecch
Confidence 479999999998887665541 11110 012467788999988877766655432110 000012223334
Q ss_pred ccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEE
Q psy889 73 NAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 73 d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 152 (167)
++.+-.|+.+++|++-.+..++=+......+. . +-..+.....+-..|.-.+.-..-.|...+|+..++.|+|||++
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~--~-nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIE--S-NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCC--C-CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhh--c-cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 44445566666666666665544322100000 0 00000000000000000000011235566688899999999999
Q ss_pred EEEeecccCC
Q psy889 153 LCLEFSHVNN 162 (167)
Q Consensus 153 ~~~~~~~~~~ 162 (167)
++...+..+.
T Consensus 206 vl~~~gr~~~ 215 (359)
T 1m6e_X 206 VLTILGRRSE 215 (359)
T ss_dssp EEEEEECSSS
T ss_pred EEEEecCCCC
Confidence 9988887664
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.36 E-value=1.8e-06 Score=73.21 Aligned_cols=90 Identities=6% Similarity=-0.175 Sum_probs=61.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCC-CC---CCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPN-TL---SEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~-~~---~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l 77 (167)
+|+|.|||+|.+...+++++...... .. .......++|+|+++.++..|+.++...+. ..++....+|....
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi----~~~i~i~~gDtL~~ 322 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI----DFNFGKKNADSFLD 322 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC----CCBCCSSSCCTTTS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC----CcccceeccchhcC
Confidence 69999999999988887654200000 00 000035799999999999999998876554 12344467776554
Q ss_pred C-CCCCCCceeeeeecccc
Q psy889 78 P-IESDSYSAYTIAFGIRN 95 (167)
Q Consensus 78 ~-~~~~~fd~~~~~~~~~~ 95 (167)
+ +....||.+++.+|...
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp CSCTTCCEEEEEECCCSSC
T ss_pred cccccccccEEEECCCcCC
Confidence 4 66788999999988853
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.32 E-value=9.6e-07 Score=75.89 Aligned_cols=103 Identities=10% Similarity=-0.017 Sum_probs=69.6
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
.|||+|||+|-++...+++..... ...+++++|-|+ +...+++.....++
T Consensus 360 vVldVGaGrGpLv~~al~A~a~~~-------~~vkVyAVEknp-~A~~a~~~v~~N~~---------------------- 409 (637)
T 4gqb_A 360 VLMVLGAGRGPLVNASLRAAKQAD-------RRIKLYAVEKNP-NAVVTLENWQFEEW---------------------- 409 (637)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTT-------CEEEEEEEESCH-HHHHHHHHHHHHTT----------------------
T ss_pred EEEEECCCCcHHHHHHHHHHHhcC-------CCcEEEEEECCH-HHHHHHHHHHhccC----------------------
Confidence 599999999999666666543100 133689999997 55556666654444
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhc--ccccccHHHHHHHHHHhcCCCcEEE
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG--IRNVTRIDKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (167)
+.++.++.++++++..+ .++|+|++-.. +..-..+..++.-..++|||||.++
T Consensus 410 ------------------~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 410 ------------------GSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ------------------GGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred ------------------CCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 26788899999887654 56899988432 1111223456666789999999875
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.31 E-value=3.1e-07 Score=79.38 Aligned_cols=111 Identities=13% Similarity=0.017 Sum_probs=68.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCC-CCCC-CCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLP-PNTL-SEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~-~~~~-~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 79 (167)
.|||+|||+|-++...+++..... .++. ......+++++|.++.++...+.+.. .++
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-------------------- 470 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-------------------- 470 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT--------------------
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC--------------------
Confidence 599999999999765444331000 0000 00013489999999977766665554 233
Q ss_pred CCCCCceeeeeeccccccCCCCceEEeecccCCCCCC-----ccchhhHhhhhccc--ccccHHHHHHHHHHhcCCCcEE
Q psy889 80 ESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIE-----SDSYSAYTIAFGIR--NVTRIDKALSEAYRVLKPGGRF 152 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~D~v~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l 152 (167)
+.++.++..+++++..+ ..+.|+|++-..=. .-......|..+.+.|||||.+
T Consensus 471 --------------------~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 471 --------------------KRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp --------------------TTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred --------------------CCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEE
Confidence 14677888888776542 46789998844211 1112345666677999999987
Q ss_pred E
Q psy889 153 L 153 (167)
Q Consensus 153 ~ 153 (167)
+
T Consensus 531 i 531 (745)
T 3ua3_A 531 I 531 (745)
T ss_dssp E
T ss_pred E
Confidence 6
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.30 E-value=4.5e-07 Score=69.67 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=47.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++. +.. .. ..+++++|+++.+++.++++... .+++++..+|+.+++++
T Consensus 23 ~~VLEIG~G~G~lt~-l~~-~~-----------~~~v~avEid~~~~~~a~~~~~~-------~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE-PVG-ER-----------LDQLTVIELDRDLAARLQTHPFL-------GPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp CCEEEECCTTTTTHH-HHH-TT-----------CSCEEEECCCHHHHHHHHTCTTT-------GGGEEEECSCGGGCCHH
T ss_pred CEEEEECCCCcHHHH-hhh-CC-----------CCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECchhhCCHH
Confidence 379999999999999 543 21 23499999999999999976642 13688999999988754
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.29 E-value=5e-06 Score=70.39 Aligned_cols=83 Identities=8% Similarity=0.013 Sum_probs=64.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC--C
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l--~ 78 (167)
.+|+|.|||+|.+...+++++... ....++|+|+++.++..|+.++...+. ...+.....+|.... |
T Consensus 223 ~~VlDPaCGSG~fLi~a~~~l~~~--------~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~~~~I~~gDtL~~d~p 291 (542)
T 3lkd_A 223 FTLYDATMGSGSLLLNAKRYSRQP--------QTVVYFGQELNTSTYNLARMNMILHGV---PIENQFLHNADTLDEDWP 291 (542)
T ss_dssp CEEEETTCTTSTTGGGHHHHCSCT--------TTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEESCTTTSCSC
T ss_pred CEEeecccchhHHHHHHHHHHHhc--------cCceEEEEECcHHHHHHHHHHHHHcCC---CcCccceEecceeccccc
Confidence 379999999999999988876310 256799999999999999998865543 223456777886665 3
Q ss_pred -CCCCCCceeeeeeccc
Q psy889 79 -IESDSYSAYTIAFGIR 94 (167)
Q Consensus 79 -~~~~~fd~~~~~~~~~ 94 (167)
+....||.++..+|..
T Consensus 292 ~~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 292 TQEPTNFDGVLMNPPYS 308 (542)
T ss_dssp CSSCCCBSEEEECCCTT
T ss_pred ccccccccEEEecCCcC
Confidence 5678899999999886
No 282
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.28 E-value=5.5e-07 Score=69.02 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=50.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++ . ..++++..+|+.+++++
T Consensus 33 ~~VLDiG~G~G~lt~~L~~~~------------~~~v~avEid~~~~~~~~~~-~--------~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 33 NTVVEVGGGTGNLTKVLLQHP------------LKKLYVIELDREMVENLKSI-G--------DERLEVINEDASKFPFC 91 (249)
T ss_dssp CEEEEEESCHHHHHHHHTTSC------------CSEEEEECCCHHHHHHHTTS-C--------CTTEEEECSCTTTCCGG
T ss_pred CEEEEEcCchHHHHHHHHHcC------------CCeEEEEECCHHHHHHHHhc-c--------CCCeEEEEcchhhCChh
Confidence 379999999999999998742 47899999999999999865 1 34788999999998765
Q ss_pred C
Q psy889 81 S 81 (167)
Q Consensus 81 ~ 81 (167)
.
T Consensus 92 ~ 92 (249)
T 3ftd_A 92 S 92 (249)
T ss_dssp G
T ss_pred H
Confidence 4
No 283
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.23 E-value=2.6e-07 Score=73.57 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=62.8
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC---
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~--- 78 (167)
.++|..||.|+.+..+++.+. +.++++|+|.++.+++.++ ++ ..++++++.+++.+++
T Consensus 60 iyVD~TlG~GGHS~~iL~~lg----------~~GrVig~D~Dp~Al~~A~-rL--------~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 60 IYIDGTFGRGGHSRLILSQLG----------EEGRLLAIDRDPQAIAVAK-TI--------DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp EEEESCCTTSHHHHHHHTTCC----------TTCEEEEEESCHHHHHHHT-TC--------CCTTEEEEESCGGGHHHHH
T ss_pred EEEEeCcCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHH-hh--------cCCcEEEEeCCHHHHHHHH
Confidence 589999999999999999864 4689999999999999884 43 1258899999998875
Q ss_pred --CCC-CCCceeeeeecccccc
Q psy889 79 --IES-DSYSAYTIAFGIRNID 97 (167)
Q Consensus 79 --~~~-~~fd~~~~~~~~~~~~ 97 (167)
..- +.+|.++...|.+.+.
T Consensus 121 ~~~g~~~~vDgILfDLGVSS~Q 142 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVSSPQ 142 (347)
T ss_dssp HHTTCTTCEEEEEEECSCCHHH
T ss_pred HhcCCCCcccEEEECCccCHHH
Confidence 111 3699999999998876
No 284
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.22 E-value=2.6e-07 Score=71.56 Aligned_cols=104 Identities=10% Similarity=-0.002 Sum_probs=60.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
++|||+|||+|+.+..++.... ...++++|++..+... .. +
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~-----------~~~v~g~dVGvDl~~~--------pi---~----------------- 116 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKE-----------VSGVKGFTLGRDGHEK--------PM---N----------------- 116 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCTTCCC--------CC---C-----------------
T ss_pred CEEEEecCCCCHHHHHHHHhcC-----------CCcceeEEEeccCccc--------cc---c-----------------
Confidence 3799999999999998876431 3457788876433000 00 0
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhccc----ccccHH--HHHHHHHHhcCCC-cEEE
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR----NVTRID--KALSEAYRVLKPG-GRFL 153 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~----~~~~~~--~~l~~~~~~Lkpg-G~l~ 153 (167)
...+ +.++.....+.+...+....+|+|+|..+.+ ++...+ .++..+.++|+|| |.|+
T Consensus 117 ~~~~---------------g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV 181 (277)
T 3evf_A 117 VQSL---------------GWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFC 181 (277)
T ss_dssp CCBT---------------TGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred cCcC---------------CCCeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 0000 0122222333333344556788888855433 222222 3478889999999 9999
Q ss_pred EEeec
Q psy889 154 CLEFS 158 (167)
Q Consensus 154 ~~~~~ 158 (167)
+-.|.
T Consensus 182 ~KVf~ 186 (277)
T 3evf_A 182 VKVLA 186 (277)
T ss_dssp EEESC
T ss_pred EEecC
Confidence 96665
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.14 E-value=4.4e-06 Score=73.38 Aligned_cols=83 Identities=13% Similarity=0.023 Sum_probs=52.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc--c-CCCCCCcccccccccccC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF--K-VPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~--~-~~~~~~~~~~~~~d~~~l 77 (167)
.+|||.|||+|.+...++.++... ...+++|+|+++.+++.|+.+..... . +. .........++...
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei--------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG--i~~~~I~~dD~L~~ 392 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNV--------MPRQIWANDIETLFLELLSIRLGLLFPQLVSS--NNAPTITGEDVCSL 392 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTC--------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT--TBCCEEECCCGGGC
T ss_pred CEEEECCCCccHHHHHHHHHhccc--------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC--CCcceEEecchhcc
Confidence 379999999999999998866310 13579999999999999944432111 1 10 11112333444443
Q ss_pred C-CCCCCCceeeeeecc
Q psy889 78 P-IESDSYSAYTIAFGI 93 (167)
Q Consensus 78 ~-~~~~~fd~~~~~~~~ 93 (167)
. .....||.++..+|.
T Consensus 393 ~~~~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 393 NPEDFANVSVVVMNPPY 409 (878)
T ss_dssp CGGGGTTEEEEEECCBC
T ss_pred cccccCCCCEEEECCCc
Confidence 2 345677777777776
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.14 E-value=2.4e-06 Score=65.88 Aligned_cols=81 Identities=11% Similarity=-0.016 Sum_probs=58.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCC----Cccccccccccc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPN----PRLRFLEANAEE 76 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~d~~~ 76 (167)
.+|||+|||+|..++.++.. +.+++++|.++.+.+.+++.++....+...+ .++++..+|..+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-------------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-------------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-------------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 37999999999999999884 5679999999998888877765443211111 367888898777
Q ss_pred -CCCCCCCCceeeeeeccc
Q psy889 77 -LPIESDSYSAYTIAFGIR 94 (167)
Q Consensus 77 -l~~~~~~fd~~~~~~~~~ 94 (167)
++-....||.+.+.++.+
T Consensus 157 ~L~~~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 157 ALTDITPRPQVVYLDPMFP 175 (258)
T ss_dssp HSTTCSSCCSEEEECCCCC
T ss_pred HHHhCcccCCEEEEcCCCC
Confidence 442223688887776664
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.04 E-value=5.5e-06 Score=63.79 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=65.7
Q ss_pred eEEeeecCCCchHHHHHHhhcc----CCCCCCCCCCCCcEEEeeCCh---HHHH-----------HHHHHHHhcccCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDK----LPPNTLSEHCAPHVTVADINR---AMLD-----------VGEQRARDLFKVPVP 63 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~D~s~---~~~~-----------~a~~~~~~~~~~~~~ 63 (167)
+|||+|+|+|..+..+++.+.+ .+ ... ....+++++|..+ +.+. .+++....+ +.+
T Consensus 63 ~ILEiGfGtG~n~l~~~~~~~~~~~~~p-~~~--~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w---~~~ 136 (257)
T 2qy6_A 63 VVAESGFGTGLNFLTLWQAFDQFREAHP-QAQ--LQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQW---PMP 136 (257)
T ss_dssp EEEESCCTTSHHHHHHHHHHHHHHHHCT-TSS--CCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTC---CCS
T ss_pred EEEEECCChHHHHHHHHHHHHhhhhhCC-CCC--cceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhc---ccc
Confidence 7999999999999888775400 01 000 0025899999876 4444 334333321 100
Q ss_pred CCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCC-CCCCcc----chhhHhhh-hccccccc--H
Q psy889 64 NPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LPIESD----SYSAYTIA-FGIRNVTR--I 135 (167)
Q Consensus 64 ~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~----~~D~v~~~-~~~~~~~~--~ 135 (167)
-+.. . +.. +.....++.+..+|..+ ++.... .||+|+.- +.-..-++ -
T Consensus 137 ~~g~-----------------~----r~~---~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~ 192 (257)
T 2qy6_A 137 LPGC-----------------H----RLL---LDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWT 192 (257)
T ss_dssp CSEE-----------------E----EEE---EC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCC
T ss_pred ccch-----------------h----hee---ccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcC
Confidence 0000 0 000 00011245666666554 332222 68888762 11111223 3
Q ss_pred HHHHHHHHHhcCCCcEEEE
Q psy889 136 DKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 136 ~~~l~~~~~~LkpgG~l~~ 154 (167)
..+|+.+++.|+|||.|+.
T Consensus 193 ~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 193 QNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEE
Confidence 5789999999999999874
No 288
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.03 E-value=1.1e-06 Score=85.41 Aligned_cols=107 Identities=16% Similarity=0.151 Sum_probs=56.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 80 (167)
|+|||+|.|+|..+..+++.+...+ ....+|+.+|+|+...+.++++++...
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~------~~~~~yt~td~s~~~~~~a~~~f~~~d---------------------- 1293 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQP------VMDLDYTATDRNPQALEAAQAKLEQLH---------------------- 1293 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSS------SCEEEEEEECSSSSSTTTTTTTHHHHT----------------------
T ss_pred ceEEEECCCccHHHHHHHHhhcccC------cccceEEEecCChHHHHHHHHHhhhcc----------------------
Confidence 5899999999999888887763100 013579999999988888887764321
Q ss_pred CCCCceeeeeeccccccCCCCceEEeecccCCC-CCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 81 SDSYSAYTIAFGIRNIDIPNPRLRFLEANAEEL-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 81 ~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
+.....|.... ++....||+|++.+++|..+++...++++++.|||||++++.+.
T Consensus 1294 ----------------------i~~~~~d~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1294 ----------------------VTQGQWDPANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ----------------------EEEECCCSSCCCC-----CCEEEEECC--------------------CCEEEEEEC
T ss_pred ----------------------cccccccccccccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 11111122221 22445699999999999888999999999999999999998764
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.82 E-value=2.1e-05 Score=61.35 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=70.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH--------------------------HHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA--------------------------MLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~--------------------------~~~~a~~~~~ 55 (167)
+|||+|+..|..+..++..+.... .++.+++++|..+. .++.++++++
T Consensus 109 ~IlEiGv~~G~Sai~ma~~l~~~g------~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 109 DLVETGVWRGGACILMRGILRAHD------VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTT------CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred cEEEeecCchHHHHHHHHHhHhcC------CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 699999999999998877653100 01578999996422 3566777776
Q ss_pred hcccCCCCCCcccccccccccCCCCCCCCceeeeeeccccccCCCCceEEeecccCC-CC-CCccchhhHhhhhcccccc
Q psy889 56 DLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEE-LP-IESDSYSAYTIAFGIRNVT 133 (167)
Q Consensus 56 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~~~~~~ 133 (167)
..+. .. .++.++.++..+ ++ ....+||+|.+-.. ...
T Consensus 183 ~~gl---~~------------------------------------~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y~ 221 (282)
T 2wk1_A 183 NYDL---LD------------------------------------EQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LYE 221 (282)
T ss_dssp HTTC---CS------------------------------------TTEEEEESCHHHHSTTCCCCCEEEEEECCC--SHH
T ss_pred HcCC---Cc------------------------------------CceEEEEeCHHHHHhhCCCCCEEEEEEcCC--ccc
Confidence 6553 01 345566555433 22 22346777765331 223
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEee
Q psy889 134 RIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 134 ~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.....|..++..|+|||++++=++
T Consensus 222 ~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 222 STWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HHHHHHHHHGGGEEEEEEEEESSC
T ss_pred cHHHHHHHHHhhcCCCEEEEEcCC
Confidence 346778889999999999998554
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.67 E-value=3.9e-06 Score=65.15 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=26.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
++|||+|||.|..+..++.... ...++|+|++..
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~g-----------v~sV~GvdvG~d 125 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKN-----------VKKVMAFTLGVQ 125 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCT
T ss_pred CEEEEeCCCCCHHHHHHHHhcC-----------CCeeeeEEeccC
Confidence 4799999999999998876442 446889998764
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.67 E-value=5.7e-05 Score=58.99 Aligned_cols=44 Identities=7% Similarity=-0.040 Sum_probs=39.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
.+|||++||+|.++.+++. .+.+++|+|+++.+++.+++++...
T Consensus 237 ~~vlD~f~GsGt~~~~a~~-------------~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAAR-------------WGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CEEEETTCTTTHHHHHHHH-------------TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHH-------------cCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3699999999999999876 3678999999999999999998754
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.67 E-value=0.0001 Score=59.41 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=27.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCCh
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR 44 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~ 44 (167)
|++||+||++|+.|..+++ .+++++++|..+
T Consensus 213 ~~vlDLGAaPGGWT~~l~~-------------rg~~V~aVD~~~ 243 (375)
T 4auk_A 213 MWAVDLGACPGGWTYQLVK-------------RNMWVYSVDNGP 243 (375)
T ss_dssp CEEEEETCTTCHHHHHHHH-------------TTCEEEEECSSC
T ss_pred CEEEEeCcCCCHHHHHHHH-------------CCCEEEEEEhhh
Confidence 6899999999999999987 478999999764
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.67 E-value=7.1e-05 Score=60.55 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=37.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+||-+|.|.|..++.++++- ..+++.+|+++..++.+++.+.
T Consensus 208 rVLIIGgGdG~~~revlkh~------------~~~V~~VEIDp~VVe~ar~yfp 249 (381)
T 3c6k_A 208 DVLILGGGDGGILCEIVKLK------------PKMVTMVEIDQMVIDGCKKYMR 249 (381)
T ss_dssp EEEEEECTTCHHHHHHHTTC------------CSEEEEEESCHHHHHHHHHHCC
T ss_pred eEEEECCCcHHHHHHHHhcC------------CceeEEEccCHHHHHHHHhhch
Confidence 79999999999999998863 4689999999999999998754
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.50 E-value=0.0006 Score=57.53 Aligned_cols=88 Identities=8% Similarity=-0.074 Sum_probs=55.3
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCC--CCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLS--EHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~- 78 (167)
+|+|.+||+|++...+.+++......... ......++|.|+++.+...|+.+.--++. ..+ ....+|...-+
T Consensus 220 ~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~---~~~--~I~~~dtL~~~~ 294 (530)
T 3ufb_A 220 SVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL---EYP--RIDPENSLRFPL 294 (530)
T ss_dssp CEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC---SCC--EEECSCTTCSCG
T ss_pred EEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC---ccc--cccccccccCch
Confidence 79999999999998888776421100000 00124699999999999999988765554 112 22334433322
Q ss_pred ---CCCCCCceeeeeeccc
Q psy889 79 ---IESDSYSAYTIAFGIR 94 (167)
Q Consensus 79 ---~~~~~fd~~~~~~~~~ 94 (167)
.+...||.++..+|..
T Consensus 295 ~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 295 REMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp GGCCGGGCBSEEEECCCSS
T ss_pred hhhcccccceEEEecCCCC
Confidence 2345688888887773
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.24 E-value=7.7e-05 Score=58.27 Aligned_cols=34 Identities=9% Similarity=-0.116 Sum_probs=26.8
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
++|||+||++|+.+..+++... ...++|+|+...
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~g-----------v~sV~Gvdlg~~ 116 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQKE-----------VMSVKGYTLGIE 116 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCT
T ss_pred CEEEEcCCCCCHHHHHHHHhcC-----------CceeeeEEeccc
Confidence 4799999999999999987542 346788888653
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.15 E-value=0.00018 Score=50.68 Aligned_cols=36 Identities=6% Similarity=-0.183 Sum_probs=30.8
Q ss_pred CeEEeeecCCC-chHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHH
Q psy889 1 MYILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLD 48 (167)
Q Consensus 1 ~~vLD~g~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~ 48 (167)
.+|||+|||.| ..+..++++. +.+++++|+++..++
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~------------g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHS------------KVDLVLTDIKPSHGG 73 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHS------------CCEEEEECSSCSSTT
T ss_pred CcEEEEccCCChHHHHHHHHhC------------CCeEEEEECCccccc
Confidence 38999999999 6998888644 788999999998776
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.49 E-value=0.00079 Score=52.62 Aligned_cols=34 Identities=6% Similarity=-0.126 Sum_probs=27.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
++|||+||++|+.+..++.... ..+++|+|+...
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~g-----------v~~V~avdvG~~ 129 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKR-----------VQEVRGYTKGGP 129 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTT-----------EEEEEEECCCST
T ss_pred CEEEEeCCCCCcHHHHHHhhcC-----------CCEEEEEEcCCC
Confidence 3799999999999998776542 447999998653
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.47 E-value=0.0069 Score=48.54 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=46.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l 77 (167)
.|||+|.|.|.+|..+++... ..+++++|+++.++...++.. . .++++.+.+|+..+
T Consensus 61 ~VlEIGPG~G~LT~~Ll~~~~-----------~~~vvavE~D~~l~~~L~~~~-~-------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 61 KVLDLYPGVGIQSAIFYNKYC-----------PRQYSLLEKRSSLYKFLNAKF-E-------GSPLQILKRDPYDW 117 (353)
T ss_dssp EEEEESCTTCHHHHHHHHHHC-----------CSEEEEECCCHHHHHHHHHHT-T-------TSSCEEECSCTTCH
T ss_pred EEEEECCCCCHHHHHHHhhCC-----------CCEEEEEecCHHHHHHHHHhc-c-------CCCEEEEECCccch
Confidence 699999999999999998652 568999999999998888765 1 24778888887443
No 299
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.46 E-value=0.00043 Score=53.09 Aligned_cols=20 Identities=5% Similarity=-0.157 Sum_probs=18.1
Q ss_pred CeEEeeecCCCchHHHHHHh
Q psy889 1 MYILFYLVFPGDIAFRFLNY 20 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~ 20 (167)
++|+|+||+.|+-+..+++.
T Consensus 75 ~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp EEEEEETCTTSHHHHHHTTS
T ss_pred CEEEEcCCCCCHHHHHHhhh
Confidence 58999999999999998875
No 300
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.43 E-value=0.00059 Score=51.84 Aligned_cols=33 Identities=6% Similarity=-0.121 Sum_probs=27.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCCh
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR 44 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~ 44 (167)
++|+|+||++|..+..++.... ..+++++|+..
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g-----------~~~V~avdvG~ 112 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKK-----------VTEVRGYTKGG 112 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTT-----------EEEEEEECCCS
T ss_pred CEEEEcCCCCCcHHHHHHHhcC-----------CCEEEEEecCC
Confidence 4799999999999998877552 45799999865
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.18 E-value=0.0095 Score=48.04 Aligned_cols=75 Identities=7% Similarity=0.010 Sum_probs=54.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
|+|+|+.||.|.++..+.++. ...+.++|+++.+++..+.+.. ......+|+.++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG------------~~~v~avE~d~~a~~t~~~N~~----------~~~~~~~DI~~~~~~ 60 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG------------FDVKMAVEIDQHAINTHAINFP----------RSLHVQEDVSLLNAE 60 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT------------CEEEEEECSCHHHHHHHHHHCT----------TSEEECCCGGGCCHH
T ss_pred CeEEEEccCcCHHHHHHHHCC------------CcEEEEEeCCHHHHHHHHHhCC----------CCceEecChhhcCHH
Confidence 689999999999999987743 2346699999999988887653 2345667777764
Q ss_pred -C-----CCCCCceeeeeecccccc
Q psy889 79 -I-----ESDSYSAYTIAFGIRNID 97 (167)
Q Consensus 79 -~-----~~~~fd~~~~~~~~~~~~ 97 (167)
+ ....+|.+..+++=..+-
T Consensus 61 ~~~~~~~~~~~~D~i~ggpPCQ~fS 85 (376)
T 3g7u_A 61 IIKGFFKNDMPIDGIIGGPPCQGFS 85 (376)
T ss_dssp HHHHHHCSCCCCCEEEECCCCCTTC
T ss_pred HHHhhcccCCCeeEEEecCCCCCcc
Confidence 1 345677777776654443
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.58 E-value=0.009 Score=47.50 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=53.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
++|+|+.||.|.++..+.+..- ....++++|+++.+++..+.+... .....+|+.++.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~----------~~~~v~~~E~d~~a~~~~~~N~~~----------~~~~~~Di~~~~~~ 62 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI----------PAQVVAAIDVNTVANEVYKYNFPH----------TQLLAKTIEGITLE 62 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC----------SEEEEEEECCCHHHHHHHHHHCTT----------SCEECSCGGGCCHH
T ss_pred CeEEEeCcCccHHHHHHHHCCC----------CceEEEEEeCCHHHHHHHHHhccc----------cccccCCHHHccHh
Confidence 4799999999999999987531 013588999999999999987642 234567777764
Q ss_pred -CCCCCCceeeeeeccccc
Q psy889 79 -IESDSYSAYTIAFGIRNI 96 (167)
Q Consensus 79 -~~~~~fd~~~~~~~~~~~ 96 (167)
++...+|.+..+++=..+
T Consensus 63 ~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 63 EFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp HHHHHCCSEEEECCC----
T ss_pred HcCcCCcCEEEEcCCCcch
Confidence 222268888888875444
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.54 E-value=0.074 Score=42.12 Aligned_cols=126 Identities=5% Similarity=-0.055 Sum_probs=70.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
.|+.+|||......++.... .+.+++-+|. ++.++.-++.+...+..+ + ..+. .......
T Consensus 100 qVV~LGaGlDTr~~RL~~~~-----------~~~~~~EvD~-P~vi~~K~~~l~~~~~l~------~-~l~~-~~~~~~~ 159 (334)
T 1rjd_A 100 QVVNLGCGSDLRMLPLLQMF-----------PHLAYVDIDY-NESVELKNSILRESEILR------I-SLGL-SKEDTAK 159 (334)
T ss_dssp EEEEETCTTCCTHHHHHHHC-----------TTEEEEEEEC-HHHHHHHHHHHHHSHHHH------H-HHTC-CSSCCCC
T ss_pred EEEEeCCCCccHHHHhcCcC-----------CCCEEEECCC-HHHHHHHHHHhhhccchh------h-hccc-ccccccc
Confidence 48999999999999997743 2456667776 777777777665432100 0 0000 0000000
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCC---------CccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPI---------ESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGG 150 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG 150 (167)
. .......+..++..|+.+..+ ......++++..++.+++ ...++++.+.+.. |+|
T Consensus 160 ~------------~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~ 226 (334)
T 1rjd_A 160 S------------PFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHG 226 (334)
T ss_dssp T------------TEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSE
T ss_pred c------------ccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCc
Confidence 0 000001345556666554211 223456777777777664 4678888888776 788
Q ss_pred EEEEEeeccc
Q psy889 151 RFLCLEFSHV 160 (167)
Q Consensus 151 ~l~~~~~~~~ 160 (167)
.+++.|.-.+
T Consensus 227 ~~v~~e~i~~ 236 (334)
T 1rjd_A 227 LWISYDPIGG 236 (334)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEeccCC
Confidence 8776676544
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.47 E-value=0.055 Score=42.70 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=55.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-C
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-~ 79 (167)
++|+|+.||.|.++..+.+.. ...+.++|+++.+++..+.+.... ..+|+.++. -
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG------------~~~v~~~e~d~~a~~t~~~N~~~~------------~~~Di~~~~~~ 67 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCG------------AECVYSNEWDKYAQEVYEMNFGEK------------PEGDITQVNEK 67 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTT------------CEEEEEECCCHHHHHHHHHHHSCC------------CBSCGGGSCGG
T ss_pred CcEEEECCCcCHHHHHHHHCC------------CeEEEEEeCCHHHHHHHHHHcCCC------------CcCCHHHcCHh
Confidence 479999999999999987742 334778999999999988876321 156777664 2
Q ss_pred CCCCCceeeeeeccccccCCC
Q psy889 80 ESDSYSAYTIAFGIRNIDIPN 100 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~~~~~ 100 (167)
....+|.+..+++-..+-..+
T Consensus 68 ~~~~~D~l~~gpPCQ~fS~ag 88 (327)
T 2c7p_A 68 TIPDHDILCAGFPCQAFSISG 88 (327)
T ss_dssp GSCCCSEEEEECCCTTTCTTS
T ss_pred hCCCCCEEEECCCCCCcchhc
Confidence 223589998888887765443
No 305
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.41 E-value=0.013 Score=46.04 Aligned_cols=44 Identities=5% Similarity=-0.122 Sum_probs=38.4
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF 58 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~ 58 (167)
.|||..||+|..+.+..+ .+.+++|+|+++.+++.+++|+....
T Consensus 255 ~VlDpF~GsGtt~~aa~~-------------~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 255 LVVDIFGGSNTTGLVAER-------------ESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp EEEETTCTTCHHHHHHHH-------------TTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred EEEECCCCCCHHHHHHHH-------------cCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 699999999999888766 36789999999999999999987554
No 306
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.34 E-value=0.022 Score=44.48 Aligned_cols=73 Identities=7% Similarity=0.089 Sum_probs=50.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-C
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-~ 79 (167)
|+|+|+.||.|.++.-+-++. ...+.++|+++.+++.-+.+... +...+|+.++. -
T Consensus 1 mkvidLFsG~GG~~~G~~~aG------------~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~DI~~i~~~ 57 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG------------FRIICANEYDKSIWKTYESNHSA-----------KLIKGDISKISSD 57 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT------------CEEEEEEECCTTTHHHHHHHCCS-----------EEEESCGGGCCGG
T ss_pred CeEEEeCcCccHHHHHHHHCC------------CEEEEEEeCCHHHHHHHHHHCCC-----------CcccCChhhCCHh
Confidence 899999999999999886642 23456999999999888876431 34567887775 2
Q ss_pred CCCCCceeeeeeccccc
Q psy889 80 ESDSYSAYTIAFGIRNI 96 (167)
Q Consensus 80 ~~~~fd~~~~~~~~~~~ 96 (167)
+....|.++-+++=..+
T Consensus 58 ~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 58 EFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp GSCCCSEEECCCCGGGT
T ss_pred hCCcccEEEecCCCCCc
Confidence 22345666555554433
No 307
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.24 E-value=0.02 Score=44.91 Aligned_cols=27 Identities=15% Similarity=-0.018 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeecccC
Q psy889 135 IDKALSEAYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 135 ~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (167)
.+.++.=+.++|+|||-|++--|....
T Consensus 196 ~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 196 FTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred HHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 356667789999999999986665444
No 308
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.09 E-value=0.018 Score=45.34 Aligned_cols=44 Identities=11% Similarity=-0.056 Sum_probs=36.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCCh---HHHHHHHHHHHhcc
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR---AMLDVGEQRARDLF 58 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~---~~~~~a~~~~~~~~ 58 (167)
.|||..||+|..+.+.... +.+++|+|+++ ..++.+++|+...+
T Consensus 245 ~vlDpF~GsGtt~~aa~~~-------------~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 245 TVLDFFAGSGVTARVAIQE-------------GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp EEEETTCTTCHHHHHHHHH-------------TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred EEEecCCCCCHHHHHHHHc-------------CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 6999999999999888763 67899999999 99999999987554
No 309
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.05 E-value=0.0082 Score=46.62 Aligned_cols=41 Identities=10% Similarity=0.032 Sum_probs=35.8
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
.+||+-+|||.+++.+++ .+.+++.+|.++..+...++++.
T Consensus 94 ~~LDlfaGSGaLgiEaLS-------------~~d~~vfvE~~~~a~~~L~~Nl~ 134 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLR-------------SQDRLYLCELHPTEYNFLLKLPH 134 (283)
T ss_dssp SSCCEEECHHHHHHHHSC-------------TTSEEEEECCSHHHHHHHTTSCC
T ss_pred CceeEeCCcHHHHHHHcC-------------CCCeEEEEeCCHHHHHHHHHHhC
Confidence 479999999999999887 36789999999999998887764
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.39 E-value=0.061 Score=42.49 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=53.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcE-EEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC-
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHV-TVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~- 78 (167)
++++|+.||.|.++..+.++.- ....+ .++|+++.+++..+.+.... ...+|+.++.
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~----------~~~~v~~a~e~d~~a~~ty~~N~~~~-----------~~~~DI~~~~~ 69 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSI----------NINATFIPFDINEIANKIYSKNFKEE-----------VQVKNLDSISI 69 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSC----------CCCEEEEEECCCHHHHHHHHHHHCCC-----------CBCCCTTTCCH
T ss_pred CEEEEECCChhHHHHHHHHcCC----------CceEEEEEEECCHHHHHHHHHHCCCC-----------cccCChhhcCH
Confidence 4799999999999999877430 01345 69999999999888876422 3467777764
Q ss_pred --CCCCCCceeeeeeccccc
Q psy889 79 --IESDSYSAYTIAFGIRNI 96 (167)
Q Consensus 79 --~~~~~fd~~~~~~~~~~~ 96 (167)
++...+|.+..+++=..+
T Consensus 70 ~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 70 KQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp HHHHHTCCCEEEECCCCTTC
T ss_pred HHhccCCCCEEEecCCccCc
Confidence 333367888877775544
No 311
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.35 E-value=0.045 Score=43.33 Aligned_cols=77 Identities=16% Similarity=0.068 Sum_probs=53.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC--
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 78 (167)
++++|+.||.|.++..+.++.- ....+.++|+++..++..+.+.... ....+|+.++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~----------~~~~v~a~e~d~~a~~ty~~N~~~~----------~~~~~DI~~~~~~ 63 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL----------DGEIVAAVDINTVANSVYKHNFPET----------NLLNRNIQQLTPQ 63 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC----------SEEEEEEECCCHHHHHHHHHHCTTS----------CEECCCGGGCCHH
T ss_pred CEEEEECcCccHHHHHHHHcCC----------CceEEEEEeCCHHHHHHHHHhCCCC----------ceeccccccCCHH
Confidence 4799999999999999877531 0134679999999998888775422 23567777764
Q ss_pred -CCCCCCceeeeeecccccc
Q psy889 79 -IESDSYSAYTIAFGIRNID 97 (167)
Q Consensus 79 -~~~~~fd~~~~~~~~~~~~ 97 (167)
++...+|.+..+++=..+-
T Consensus 64 ~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 64 VIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp HHHHTTCCEEEECCCCCCSE
T ss_pred HhccCCCCEEEecCCCcchh
Confidence 3333678887777755443
No 312
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.14 E-value=0.093 Score=42.59 Aligned_cols=45 Identities=11% Similarity=-0.027 Sum_probs=38.3
Q ss_pred eEEeeecCCCchHHHHHH-hhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 2 YILFYLVFPGDIAFRFLN-YVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.|+|+||+.|..+..++. ... ...+++++|.++...+..+++...
T Consensus 229 ~viDvGAn~G~~s~~~a~~~~~----------~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 229 KMVDCGASIGESLAGLIGVTKG----------KFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp EEEEETCTTSHHHHHHHHHHTS----------CCSEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHhcC----------CCCEEEEEcCCHHHHHHHHHHHHh
Confidence 689999999999999884 332 237899999999999999998875
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.85 E-value=0.075 Score=42.15 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=30.1
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+|. |..+..+++.. +. +++++|.+++.++.+++
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVC------------GASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHH------------TCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEECCCHHHHHHHHH
Confidence 688888765 66677777765 56 69999999998888864
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.98 E-value=0.07 Score=40.79 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=40.0
Q ss_pred CceEEeecccCCC-C-----CCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEeecccC
Q psy889 101 PRLRFLEANAEEL-P-----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 161 (167)
Q Consensus 101 ~~~~~~~~d~~~~-~-----~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (167)
.++.++.++..+. + .+...+|++.+-. +........+..++..|+|||++++=+++.+.
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~--D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~ 222 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDL--DLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK 222 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC--CCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC--cccchHHHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 6788888776542 1 1233577776533 22345677888999999999999998776543
No 315
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.93 E-value=0.17 Score=39.36 Aligned_cols=76 Identities=8% Similarity=0.063 Sum_probs=52.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCc---EEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH---VTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l 77 (167)
++++|+.||.|.++..+.+. +.+ +.++|+++..++..+.+... .....+|+.++
T Consensus 17 ~~vidLFaG~GG~~~g~~~a-------------G~~~~~v~a~E~d~~a~~ty~~N~~~----------~~~~~~DI~~i 73 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDL-------------GIQVDRYIASEVCEDSITVGMVRHQG----------KIMYVGDVRSV 73 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHT-------------TBCEEEEEEECCCHHHHHHHHHHTTT----------CEEEECCGGGC
T ss_pred CEEEEeCcCccHHHHHHHHC-------------CCccceEEEEECCHHHHHHHHHhCCC----------CceeCCChHHc
Confidence 47999999999999998774 333 58999999998877766431 23456777776
Q ss_pred C---CC-CCCCceeeeeeccccccCC
Q psy889 78 P---IE-SDSYSAYTIAFGIRNIDIP 99 (167)
Q Consensus 78 ~---~~-~~~fd~~~~~~~~~~~~~~ 99 (167)
. ++ ...+|.+..+++=..+-..
T Consensus 74 ~~~~i~~~~~~Dll~ggpPCQ~fS~a 99 (295)
T 2qrv_A 74 TQKHIQEWGPFDLVIGGSPCNDLSIV 99 (295)
T ss_dssp CHHHHHHTCCCSEEEECCCCGGGBTT
T ss_pred cHHHhcccCCcCEEEecCCCcccccc
Confidence 4 11 2357777777666555433
No 316
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.60 E-value=0.79 Score=35.76 Aligned_cols=104 Identities=12% Similarity=0.035 Sum_probs=63.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
-|+++|||-=.....+.. . .+.+++-+| .+..++..++.+...+. .+.
T Consensus 105 QvV~LGaGlDTra~Rl~~--~----------~~~~v~evD-~P~vi~~k~~lL~~~~~--~~~----------------- 152 (310)
T 2uyo_A 105 QFVILASGLDSRAYRLDW--P----------TGTTVYEID-QPKVLAYKSTTLAEHGV--TPT----------------- 152 (310)
T ss_dssp EEEEETCTTCCHHHHSCC--C----------TTCEEEEEE-CHHHHHHHHHHHHHTTC--CCS-----------------
T ss_pred eEEEeCCCCCchhhhccC--C----------CCcEEEEcC-CHHHHHHHHHHHHhcCC--CCC-----------------
Confidence 389999998777555532 1 257888899 68888888888764332 122
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCC---------CCccchhhHhhhhcccccc--cHHHHHHHHHHhcCCCc
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELP---------IESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGG 150 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~~~D~v~~~~~~~~~~--~~~~~l~~~~~~LkpgG 150 (167)
.+..++..|+.+ . +.....-++++..++++++ ....+++.+...+.||+
T Consensus 153 -------------------~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs 212 (310)
T 2uyo_A 153 -------------------ADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGS 212 (310)
T ss_dssp -------------------SEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred -------------------CCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCe
Confidence 233444444433 1 1111223444455555554 36778888888888999
Q ss_pred EEEEEee
Q psy889 151 RFLCLEF 157 (167)
Q Consensus 151 ~l~~~~~ 157 (167)
++++-.+
T Consensus 213 ~l~~d~~ 219 (310)
T 2uyo_A 213 RIAVETS 219 (310)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 8888443
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.79 E-value=0.2 Score=39.42 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=27.6
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||=+|+|. |..+..++++. +. +++++|.+++-++.+++
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~------------Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHL------------GAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTT------------TCSSEEEECCCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCcEEEEECCCHHHHHHHHH
Confidence 567777653 55555556544 56 79999999988888775
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.43 E-value=0.19 Score=39.32 Aligned_cols=39 Identities=18% Similarity=0.366 Sum_probs=29.6
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +.+++++|.+++-.+.+++
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAM------------GLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCeEEEEeCCHHHHHHHHH
Confidence 577777754 66666666655 7799999999998887764
No 319
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.41 E-value=0.095 Score=41.19 Aligned_cols=39 Identities=13% Similarity=-0.001 Sum_probs=28.6
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +.+++++|.+++-.+.+++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAM------------GAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHT------------TCEEEEECSSSTTHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHHC------------CCeEEEEeCCHHHHHHHHh
Confidence 577777654 55566666654 7799999999988887764
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.38 E-value=0.15 Score=36.47 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=22.8
Q ss_pred chhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 119 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 119 ~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+|+++.... ...+.++.+.|+++|+++.+..
T Consensus 107 ~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 107 GVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred CCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 4677764321 2467888999999999987654
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.12 E-value=0.19 Score=39.92 Aligned_cols=39 Identities=8% Similarity=0.031 Sum_probs=28.0
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||=.|+|. |..+..++++. +. +++++|.+++-.+.+++
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLA------------GATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHH
Confidence 566677643 55566666654 66 89999999988888775
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.03 E-value=0.26 Score=38.82 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=28.8
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAM------------GAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHH
Confidence 678888754 56666666654 66 89999999988877763
No 323
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=90.81 E-value=0.35 Score=38.10 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=28.8
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCc-EEEeeCChHHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPH-VTVADINRAMLDVGEQR 53 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~D~s~~~~~~a~~~ 53 (167)
+||=.|+|. |..+..+++.. +.+ ++++|.+++-.+.+++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAA------------GACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------------TCCSEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHHh
Confidence 566677643 55666666654 665 99999999999888864
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.43 E-value=0.57 Score=36.68 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=27.9
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +.+++++|.+++-++.+++
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAY------------GAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEcCCHHHHHHHHH
Confidence 577788653 55555666554 6789999999988887763
No 325
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=89.52 E-value=0.21 Score=40.36 Aligned_cols=77 Identities=13% Similarity=0.198 Sum_probs=49.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCC---
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~--- 78 (167)
+|+|+|+|.|.++..+++.+...+. .. ...+++.+|+|+...+.-++++... ++++|.. +.+++|
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p~-~~---~~~~y~iVE~Sp~Lr~~Q~~~L~~~-------~~v~W~~-~l~~lp~~~ 150 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLPI-LY---QSLSVHLVEINPVLRQKQQTLLAGI-------RNIHWHD-SFEDVPEGP 150 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSHH-HH---TTEEEEEECCCHHHHHHHHHHSTTC-------SSEEEES-SGGGSCCSS
T ss_pred EEEEECCCcchHHHHHHHHHHhCCc-cc---cccEEEEEecCHHHHHHHHHHhcCC-------CCeEEeC-ChhhcCCCC
Confidence 5899999999999999987642110 00 2357999999999888777665432 1466753 233333
Q ss_pred ---CCCCCCceeeee
Q psy889 79 ---IESDSYSAYTIA 90 (167)
Q Consensus 79 ---~~~~~fd~~~~~ 90 (167)
+.++-||...+.
T Consensus 151 ~~viANE~fDAlPv~ 165 (387)
T 1zkd_A 151 AVILANEYFDVLPIH 165 (387)
T ss_dssp EEEEEESSGGGSCCE
T ss_pred eEEEeccccccCceE
Confidence 556666654443
No 326
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.29 E-value=0.43 Score=39.14 Aligned_cols=80 Identities=14% Similarity=0.181 Sum_probs=52.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccc----cC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAE----EL 77 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~----~l 77 (167)
+|+|+|+|+|.++..+++.+..... ...+++.+|+|+.+.+.-++++.... +.-..+++|... .. .+
T Consensus 140 ~ivE~GaG~GtLa~DiL~~l~~~~~------~~~~y~iVE~Sp~Lr~~Q~~~L~~~~--~~~~~~v~W~~~-lP~~~~g~ 210 (432)
T 4f3n_A 140 RVMEFGAGTGKLAAGLLTALAALGV------ELDEYAIVDLSGELRARQRETLGAQA--PGLAARVRWLDA-LPERFEGV 210 (432)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTC------CCSEEEEECTTSSSHHHHHHHHHHHS--TTTGGGEEEESS-CCSCEEEE
T ss_pred eEEEeCCCccHHHHHHHHHHHhcCC------CCceEEEEEcCHHHHHHHHHHHhccc--cccCCCceeccc-CCccCceE
Confidence 6899999999999999988753211 13479999999999988888876421 111235677542 11 11
Q ss_pred CCCCCCCceeeee
Q psy889 78 PIESDSYSAYTIA 90 (167)
Q Consensus 78 ~~~~~~fd~~~~~ 90 (167)
-+.++-||...+.
T Consensus 211 iiANE~fDAlPv~ 223 (432)
T 4f3n_A 211 VVGNEVLDAMPVR 223 (432)
T ss_dssp EEEESCGGGSCCE
T ss_pred EEeehhhccCcee
Confidence 2555666654443
No 327
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.07 E-value=0.26 Score=38.99 Aligned_cols=40 Identities=15% Similarity=-0.027 Sum_probs=28.3
Q ss_pred eEEeee--cCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYL--VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g--~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||=.| .+.|..+..+++... +.+++++|.+++-++.+++
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~-----------g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRT-----------DLTVIATASRPETQEWVKS 215 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-----------CSEEEEECSSHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhc-----------CCEEEEEeCCHHHHHHHHH
Confidence 355555 344666777777642 7899999999988887764
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.05 E-value=0.18 Score=38.95 Aligned_cols=74 Identities=19% Similarity=0.282 Sum_probs=44.2
Q ss_pred ccccccccccc-CC-CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHH
Q psy889 66 RLRFLEANAEE-LP-IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 143 (167)
Q Consensus 66 ~~~~~~~d~~~-l~-~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~ 143 (167)
++++.++|..+ ++ ++.++||.+.+++|...... +... + .....+ ...-.++..+..++.+++
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~------y~~~-----~---~~~~~~--~~~~~~l~~l~~~~~~~~ 84 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKR------YEDT-----P---GQLGHI--EDYEAFLDELDRVWREVF 84 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC---------------------CCHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccc------cCCC-----h---hhhccc--ccHHHHHHHHHHHHHHHH
Confidence 45677888777 44 66788999999988854221 1000 0 000000 000112344677889999
Q ss_pred HhcCCCcEEEEE
Q psy889 144 RVLKPGGRFLCL 155 (167)
Q Consensus 144 ~~LkpgG~l~~~ 155 (167)
++|||||.+++.
T Consensus 85 rvLk~~G~l~i~ 96 (297)
T 2zig_A 85 RLLVPGGRLVIV 96 (297)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHcCCCcEEEEE
Confidence 999999999873
No 329
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.89 E-value=0.63 Score=36.85 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=28.4
Q ss_pred eEEeeecC-CCchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||=+|+| .|..+..+++.. +. +++++|.+++-++.+++
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~------------Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTA------------GASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------------TCSCEEEECSCTTHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEEcCCHHHHHHHHH
Confidence 56777765 356666666665 55 89999999988887763
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.61 E-value=0.94 Score=35.69 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=28.2
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 193 ~VlV~GaG~vG~~avqla~~~------------Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVA------------GASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEEcCCHHHHHHHHH
Confidence 577777643 55566666655 56 79999999998888864
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.09 E-value=0.9 Score=35.85 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=27.5
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~------------Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAA------------GAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEEcCCHHHHHHHHH
Confidence 577777643 45555555554 66 79999999988888763
No 332
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.08 E-value=0.81 Score=35.75 Aligned_cols=39 Identities=13% Similarity=0.125 Sum_probs=27.0
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~------------Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKAS------------GAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------------TCCSEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHH
Confidence 577788732 44555555544 66 89999999888877764
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.92 E-value=0.9 Score=35.84 Aligned_cols=39 Identities=5% Similarity=-0.110 Sum_probs=28.3
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+|. |..+..++++. +. +++++|.+++-++.+++
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAA------------GASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEECCCHHHHHHHHH
Confidence 577777643 55566666655 56 79999999988888764
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.80 E-value=0.55 Score=37.03 Aligned_cols=39 Identities=13% Similarity=0.038 Sum_probs=27.7
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +.+++++|.+++-++.+++
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKAT------------GAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEecCchhHHHHHH
Confidence 567777543 45555555544 7899999999988888764
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.54 E-value=0.79 Score=36.18 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=27.8
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~------------Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSA------------GAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEEcCCHHHHHHHHH
Confidence 577777643 55555666554 66 79999999998888763
No 336
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.37 E-value=0.53 Score=36.50 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=22.3
Q ss_pred chhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 119 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 119 ~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+|+++.+.. ...+.++.+.|++||+++++..
T Consensus 214 ~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 214 GYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp CEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred CCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEec
Confidence 4677665432 1347788899999999987543
No 337
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.73 E-value=0.77 Score=35.77 Aligned_cols=39 Identities=8% Similarity=-0.036 Sum_probs=30.5
Q ss_pred eEEeeecC--CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVF--PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+| .|..+..+++.. +.+++++|.+++-++.+++
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQIL------------NFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH------------TCEEEEEESSSTTHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHh
Confidence 57778776 567777777765 7899999999988888875
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.49 E-value=2.3 Score=33.96 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=27.3
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||=.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHA------------GASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHH
Confidence 466666532 45555555554 66 89999999988888875
No 339
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=86.47 E-value=0.26 Score=33.90 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=30.5
Q ss_pred CCCCCccchhhHhhhhccc-c-cccHHHHHHHHHHhcCCCcEEEE
Q psy889 112 ELPIESDSYSAYTIAFGIR-N-VTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 112 ~~~~~~~~~D~v~~~~~~~-~-~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
.+..+..+||.|+...--. . ..-.+.++..+++.|||||.|..
T Consensus 52 ~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4556677888887643222 1 12238899999999999999984
No 340
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.18 E-value=1.2 Score=34.44 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=27.6
Q ss_pred eEEeee--cCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYL--VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g--~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.| +|.|..+..+++.. +.++++++.+++-++.+++
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKAL------------GAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEEcCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHH
Confidence 466665 34455666666655 7799999999988887764
No 341
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=86.15 E-value=0.5 Score=36.45 Aligned_cols=38 Identities=11% Similarity=0.013 Sum_probs=28.2
Q ss_pred EEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 3 ILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 3 vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
||=.|+ +.|..+..+++.. +.++++++.+++-.+.+++
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~------------Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKL------------GYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHT------------TCCEEEEESCGGGHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHh
Confidence 555554 5566667777655 7799999999998888875
No 342
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=86.00 E-value=0.64 Score=38.64 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=33.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
++++|+.||.|+++.-+.+.. ...+.++|+++.+++.-+.+.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG------------~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIG------------GQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTT------------EEEEEEECCCHHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCC------------CEEEEEEeCCHHHHHHHHHhc
Confidence 479999999999999987632 234779999999888877664
No 343
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.76 E-value=0.63 Score=36.22 Aligned_cols=38 Identities=8% Similarity=0.027 Sum_probs=26.5
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~ 51 (167)
+||-.|+ |.|..+..++... +.++++++.+++.++.++
T Consensus 158 ~vlI~Ga~g~iG~~~~~~a~~~------------G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 158 TVYVSAASGAVGQLVGQLAKMM------------GCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHH
Confidence 5777775 4455555555543 778999999988777765
No 344
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.62 E-value=1.1 Score=35.31 Aligned_cols=39 Identities=13% Similarity=0.001 Sum_probs=27.6
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIA------------GASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCeEEEEcCCHHHHHHHHH
Confidence 577777642 45555566554 66 79999999988887763
No 345
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.57 E-value=1.2 Score=34.29 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=22.5
Q ss_pred chhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 119 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 119 ~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+|+++.... ...+..+.+.|+++|.++.+..
T Consensus 209 ~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 209 KVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp CEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred CceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 4677655332 3457788999999999987543
No 346
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.49 E-value=0.77 Score=35.85 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=28.5
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+ |.|..+..+++.. +.++++++.+++-.+.+++
T Consensus 162 ~VlV~Gasg~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 162 TVLVLGAAGGIGTAAIQIAKGM------------GAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSGGGHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHh
Confidence 5676775 4456666666654 7899999999988887775
No 347
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=85.44 E-value=0.48 Score=36.82 Aligned_cols=37 Identities=8% Similarity=-0.125 Sum_probs=26.4
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVG 50 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a 50 (167)
+||-.|+ |.|..+..+++.. +.++++++.+++-++.+
T Consensus 152 ~vlI~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 152 TVVISGAAGAVGSVAGQIARLK------------GCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHH
Confidence 5777776 4455555555544 77999999998877776
No 348
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=85.39 E-value=1.1 Score=35.18 Aligned_cols=21 Identities=24% Similarity=0.229 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCCCcEEEEEee
Q psy889 137 KALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 137 ~~l~~~~~~LkpgG~l~~~~~ 157 (167)
..+.++.+.|+++|.++.+..
T Consensus 254 ~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 254 KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHHHHHHhcCCEEEEEeC
Confidence 467888999999999987654
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=85.30 E-value=0.74 Score=35.74 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=26.8
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+ |.|..+..+++.. +.++++++.+++-++.+++
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMK------------GAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHH
Confidence 4666663 4455555555544 7899999999888877764
No 350
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.36 E-value=9 Score=28.31 Aligned_cols=38 Identities=11% Similarity=-0.021 Sum_probs=29.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDV 49 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~ 49 (167)
|+||=.| + |.++.++++.+.. .+.++++++.++.....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~---------~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAP---------QGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGG---------GTCEEEEEESCGGGHHH
T ss_pred CcEEEEC-C-cHHHHHHHHHHHH---------CCCEEEEEEcChhhhhh
Confidence 5788888 4 9999999998753 47789999998765443
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=84.17 E-value=1.2 Score=35.01 Aligned_cols=39 Identities=13% Similarity=-0.016 Sum_probs=27.9
Q ss_pred eEEeee--cCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYL--VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g--~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.| .|.|..+..+++.. +.++++++.+++-++.+++
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKA------------KCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHhC------------CCEEEEEECCHHHHHHHHH
Confidence 566666 45566666666654 6789999999888777764
No 352
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=84.09 E-value=4.7 Score=29.76 Aligned_cols=44 Identities=11% Similarity=0.074 Sum_probs=28.3
Q ss_pred EEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 3 ILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 3 vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+|=.|++. ..++.++++.+.. .+.+++.++.+....+..++...
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 54 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHE---------AGARLIFTYAGERLEKSVHELAG 54 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHH---------CCCEEEEecCchHHHHHHHHHHH
Confidence 44444432 2477777777642 47889999988766666655444
No 353
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=84.04 E-value=1.9 Score=33.63 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=16.2
Q ss_pred HHHHHHHHHhcCCCcEEE
Q psy889 136 DKALSEAYRVLKPGGRFL 153 (167)
Q Consensus 136 ~~~l~~~~~~LkpgG~l~ 153 (167)
..+|+++++.++|||.|.
T Consensus 206 ~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 206 LDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHhCCCcEEE
Confidence 578999999999999885
No 354
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.26 E-value=0.5 Score=40.51 Aligned_cols=50 Identities=12% Similarity=-0.027 Sum_probs=31.6
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCC-CCCCcEEEeeC---ChHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSE-HCAPHVTVADI---NRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~D~---s~~~~~~a~ 51 (167)
+|+|+|-|+|...+...+.+.+..+.+|+. ....+++++|. +.+-+..+.
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~ 122 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAH 122 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHH
Confidence 799999999998888877653110000000 02467999998 666666443
No 355
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.68 E-value=1.3 Score=34.61 Aligned_cols=32 Identities=6% Similarity=0.066 Sum_probs=22.6
Q ss_pred chhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEee
Q psy889 119 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 119 ~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+|+++.... ...+..+.+.|+++|+++++..
T Consensus 230 ~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 230 GVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 4666654332 2567888999999999987544
No 356
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.33 E-value=4.6 Score=31.15 Aligned_cols=23 Identities=9% Similarity=0.108 Sum_probs=18.3
Q ss_pred HHHHHHHHHhcCCCcEEEEEeec
Q psy889 136 DKALSEAYRVLKPGGRFLCLEFS 158 (167)
Q Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~ 158 (167)
...+....+.|++||.+++....
T Consensus 240 ~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 240 PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCC
T ss_pred cchhhhhhheecCCeEEEEEecc
Confidence 45678889999999999885543
No 357
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=80.30 E-value=1.6 Score=34.21 Aligned_cols=38 Identities=8% Similarity=-0.173 Sum_probs=25.1
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~ 51 (167)
+||-.|+ |.|..+..++... +.++++++.+++.++.++
T Consensus 173 ~vlV~GasggiG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 173 SVLVHGASGGVGLAACQIARAY------------GLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC------------CCEEEEEeCChhHHHHHH
Confidence 5676765 3344444444433 788999999988777654
No 358
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.00 E-value=3.1 Score=27.61 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=30.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+|+=+|+ |.++..+++.+.. .+.+++++|.+++.++.+++
T Consensus 8 ~v~I~G~--G~iG~~la~~L~~---------~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 8 EYIVIGS--EAAGVGLVRELTA---------AGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp SEEEECC--SHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHH---------CCCeEEEEECCHHHHHHHHH
Confidence 5666666 6688888887642 37789999999988776654
No 359
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=79.85 E-value=1.3 Score=35.81 Aligned_cols=50 Identities=6% Similarity=-0.171 Sum_probs=35.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
++|+|+.||.|+.+..+-+....... ..-.+.++|+++.++..-+.+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~------~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNW------EIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTE------EEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCcccc------ceeeEEEEecCHHHHHHHHHHcCC
Confidence 48999999999999998775410000 011267899999999888877653
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.38 E-value=0.67 Score=36.23 Aligned_cols=19 Identities=5% Similarity=0.083 Sum_probs=16.4
Q ss_pred CCcEEEeeCChHHHHHHHH
Q psy889 34 APHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 34 ~~~~~~~D~s~~~~~~a~~ 52 (167)
+.++++++.+++-++.+++
T Consensus 175 Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 175 GLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TCEEEEECCSHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHh
Confidence 7899999999988888775
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=79.22 E-value=2.2 Score=33.33 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCCcEEEEEee
Q psy889 138 ALSEAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 138 ~l~~~~~~LkpgG~l~~~~~ 157 (167)
.+....+.|+++|.++.+..
T Consensus 243 ~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 243 YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp GHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHHHhccCCCEEEEEec
Confidence 46778899999999987553
No 362
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=79.22 E-value=1.2 Score=38.38 Aligned_cols=50 Identities=4% Similarity=-0.227 Sum_probs=30.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCC-CCCCcEEEeeCChHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSE-HCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~a~ 51 (167)
+|+|+|-|+|...+...+.+....+.+++. ....+++.+|..+-..+..+
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~ 111 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLA 111 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHH
Confidence 799999999999888877653110000000 02367999998443333333
No 363
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=78.49 E-value=0.41 Score=37.84 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=24.9
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||=.|+|. |..+..+++.. +.++++++.+++-.+.+++
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 229 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAF------------GSKVTVISTSPSKKEEALK 229 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHH
Confidence 566676532 34444444443 7789999999887776653
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=78.19 E-value=2 Score=33.58 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=26.1
Q ss_pred eEEeee--cCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYL--VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g--~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.| +|.|..+..+++.. +.+++++|.+++-++.+++
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAF------------GAEVYATAGSTGKCEACER 210 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHh
Confidence 456553 23345555555543 7899999999988887765
No 365
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.74 E-value=0.84 Score=36.26 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=27.7
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+|+=+|+ |.++..+++.+.. .+.+++++|.++..++.+++
T Consensus 168 ~V~ViGa--G~iG~~~a~~l~~---------~Ga~V~~~d~~~~~~~~~~~ 207 (369)
T 2eez_A 168 SVVILGG--GTVGTNAAKIALG---------MGAQVTILDVNHKRLQYLDD 207 (369)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------CCCEEEEEECCHHHHHHHHH
Confidence 5666776 6676666665432 37799999999887766654
No 366
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=77.11 E-value=3.8 Score=31.69 Aligned_cols=40 Identities=18% Similarity=0.321 Sum_probs=27.6
Q ss_pred eEEeeecCCC-chHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||=+|+|++ ..+..++++. -+.+++++|.+++-++.+++
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~-----------~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNV-----------FGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----------SCCEEEEEESCHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHh-----------CCCEEEEEECcHHHhhhhhh
Confidence 5677777654 4444445544 27899999999987777664
No 367
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.04 E-value=2.9 Score=28.00 Aligned_cols=40 Identities=13% Similarity=0.040 Sum_probs=29.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+|+=+|+ |.++..+++.+.. .+.+++++|.+++.++.+++
T Consensus 9 ~viIiG~--G~~G~~la~~L~~---------~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 9 HALLVGY--GRVGSLLGEKLLA---------SDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp CEEEECC--SHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHH
T ss_pred CEEEECc--CHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHH
Confidence 4555554 7788888877642 37789999999998877764
No 368
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=75.33 E-value=2.9 Score=33.25 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=30.8
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+|. |..+..+++.. +. +++++|.+++.++.+++
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLL------------GAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCSEEEEEESCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEEcCCHHHHHHHHH
Confidence 688888865 67777777766 56 89999999988887763
No 369
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=75.02 E-value=3.1 Score=29.46 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=25.6
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI 42 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~ 42 (167)
-|||+|-|+|..--++...+ ++-+++++|.
T Consensus 43 pVlElGLGNGRTydHLRe~~-----------P~R~I~vfDR 72 (174)
T 3iht_A 43 PVYELGLGNGRTYHHLRQHV-----------QGREIYVFER 72 (174)
T ss_dssp CEEEECCTTCHHHHHHHHHC-----------CSSCEEEEES
T ss_pred ceEEecCCCChhHHHHHHhC-----------CCCcEEEEEe
Confidence 38999999999988888877 4778888886
No 370
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=74.80 E-value=3.2 Score=37.59 Aligned_cols=43 Identities=7% Similarity=-0.100 Sum_probs=34.5
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCC-CcEEEeeCChHHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~a~~~~~ 55 (167)
++++|+.||.|+++.-+.++. . ..+.++|+++.+++.-+.+..
T Consensus 541 l~~iDLFaG~GGlslGl~~AG------------~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAG------------ISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHT------------SEEEEEEECSSHHHHHHHHHHCT
T ss_pred CeEEEeccCccHHHHHHHHCC------------CCceEEEEECCHHHHHHHHHhCC
Confidence 479999999999999987643 2 247799999999888877653
No 371
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=74.31 E-value=15 Score=27.63 Aligned_cols=43 Identities=14% Similarity=0.030 Sum_probs=27.0
Q ss_pred eEEeeecCCC-chHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 2 YILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 2 ~vLD~g~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
++|=-|+++| .++.++++.+.. .+.+++.++.++...+.+++.
T Consensus 33 ~~lVTGasg~~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~ 76 (293)
T 3grk_A 33 RGLILGVANNRSIAWGIAKAARE---------AGAELAFTYQGDALKKRVEPL 76 (293)
T ss_dssp EEEEECCCSSSSHHHHHHHHHHH---------TTCEEEEEECSHHHHHHHHHH
T ss_pred EEEEEcCCCCCcHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHH
Confidence 3454554432 477777776642 478899999887655554443
No 372
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=73.95 E-value=5.8 Score=32.15 Aligned_cols=39 Identities=10% Similarity=0.008 Sum_probs=27.4
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||=.|+ |.|..+..+++.. +.++++++.+++-++.+++
T Consensus 231 ~VlV~GasG~vG~~avqlak~~------------Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAG------------GANPICVVSSPQKAEICRA 271 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCeEEEEECCHHHHHHHHh
Confidence 4666664 4456666666654 7889999988888887764
No 373
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=73.72 E-value=7 Score=25.38 Aligned_cols=41 Identities=15% Similarity=0.400 Sum_probs=29.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
|+|+=+|+ |.++..++..+.. .+.+++++|.++..++..++
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~---------~g~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSE---------KGHDIVLIDIDKDICKKASA 45 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHH
Confidence 56776655 7888888777642 36789999999877665543
No 374
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=73.61 E-value=13 Score=28.64 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=26.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCC--cEEEeeCChHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAP--HVTVADINRAMLDVGE 51 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~D~s~~~~~~a~ 51 (167)
|+|.=+|+ |.++..++..+.. .+. ++++.|.+++.++.++
T Consensus 34 ~kI~IIG~--G~mG~slA~~l~~---------~G~~~~V~~~dr~~~~~~~a~ 75 (314)
T 3ggo_A 34 QNVLIVGV--GFMGGSFAKSLRR---------SGFKGKIYGYDINPESISKAV 75 (314)
T ss_dssp SEEEEESC--SHHHHHHHHHHHH---------TTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEEee--CHHHHHHHHHHHh---------CCCCCEEEEEECCHHHHHHHH
Confidence 35666764 5566666555431 244 7999999998777665
No 375
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=73.44 E-value=1.2 Score=35.32 Aligned_cols=42 Identities=17% Similarity=0.053 Sum_probs=28.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+|+=+|+ |..+..++..+.. .+.+++++|.+++-.+.+++..
T Consensus 169 ~VlViGa--GgvG~~aa~~a~~---------~Ga~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 169 KVVILGG--GVVGTEAAKMAVG---------LGAQVQIFDINVERLSYLETLF 210 (361)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHHHhh
Confidence 5677776 5565555544321 2679999999998877776543
No 376
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=72.52 E-value=1.1 Score=34.91 Aligned_cols=68 Identities=16% Similarity=0.070 Sum_probs=41.9
Q ss_pred ccccccccccc-CC-CCCCCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHH
Q psy889 66 RLRFLEANAEE-LP-IESDSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 143 (167)
Q Consensus 66 ~~~~~~~d~~~-l~-~~~~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~ 143 (167)
..+...+|..+ ++ ++.++||.+.+.+|....... .|+-. ..-.+...+...+.+++
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~-------------------~y~~~---~~~~~~~~l~~~l~~~~ 71 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKK-------------------EYGNL---EQHEYVDWFLSFAKVVN 71 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSC-------------------SSCSC---HHHHHHHHHHHHHHHHH
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCccc-------------------ccCCc---CHHHHHHHHHHHHHHHH
Confidence 45566677554 43 667788888888777532110 01100 00112345678899999
Q ss_pred HhcCCCcEEEEE
Q psy889 144 RVLKPGGRFLCL 155 (167)
Q Consensus 144 ~~LkpgG~l~~~ 155 (167)
++|+|||.+++.
T Consensus 72 rvLk~~G~i~i~ 83 (323)
T 1boo_A 72 KKLKPDGSFVVD 83 (323)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHCcCCcEEEEE
Confidence 999999999883
No 377
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=72.24 E-value=11 Score=28.52 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=29.3
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
++|=.|+++ +.++..+++.+.. .+.+++.++.++...+..++...
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~ 77 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCA---------QGAEVALTYLSETFKKRVDPLAE 77 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHH---------CCCEEEEEeCChHHHHHHHHHHH
Confidence 345555543 4778887777642 48899999998766555554443
No 378
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=72.07 E-value=1.2 Score=35.51 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=28.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
+|+=+|+ |.++..+++.+.. .+.+++++|.++.-++.+++.
T Consensus 170 ~V~ViG~--G~iG~~~a~~a~~---------~Ga~V~~~d~~~~~l~~~~~~ 210 (377)
T 2vhw_A 170 DVVVIGA--GTAGYNAARIANG---------MGATVTVLDINIDKLRQLDAE 210 (377)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHHHh
Confidence 5677776 6666666554431 267899999999877766543
No 379
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=71.99 E-value=0.35 Score=37.59 Aligned_cols=36 Identities=22% Similarity=0.600 Sum_probs=28.4
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeecccCCccCC
Q psy889 131 NVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 166 (167)
Q Consensus 131 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 166 (167)
.+..++..|..+.++|+|||++.++.|..-+.+++|
T Consensus 220 el~~l~~~l~~~~~~l~~ggr~~visfhsledr~vk 255 (301)
T 1m6y_A 220 ELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVK 255 (301)
T ss_dssp HHHHHHHHHHHGGGGEEEEEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHH
Confidence 345578889999999999999999998766655443
No 380
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=71.31 E-value=3.7 Score=35.86 Aligned_cols=48 Identities=8% Similarity=-0.192 Sum_probs=34.7
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
++|+|+.||.|+++.-+.++...... ..-.+.++|+++.+++.-+.+.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~------~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGL------KLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTE------EEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCC------ceeEEEEEeCCHHHHHHHHHHC
Confidence 57999999999999888765410000 0124679999999999888775
No 381
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=70.32 E-value=6 Score=30.70 Aligned_cols=19 Identities=5% Similarity=-0.092 Sum_probs=16.2
Q ss_pred CCcEEEeeCChHHHHHHHH
Q psy889 34 APHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 34 ~~~~~~~D~s~~~~~~a~~ 52 (167)
++++++++.+++-++.+++
T Consensus 189 Ga~Vi~~~~~~~~~~~~~~ 207 (349)
T 3pi7_A 189 GFRPIVTVRRDEQIALLKD 207 (349)
T ss_dssp TCEEEEEESCGGGHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHH
Confidence 7799999999988888764
No 382
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=69.77 E-value=14 Score=26.47 Aligned_cols=40 Identities=15% Similarity=0.011 Sum_probs=29.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVG 50 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a 50 (167)
|+||= -.|+|.++.++++.+.. .+.++++++.++...+..
T Consensus 22 ~~ilV-tGatG~iG~~l~~~L~~---------~G~~V~~~~R~~~~~~~~ 61 (236)
T 3e8x_A 22 MRVLV-VGANGKVARYLLSELKN---------KGHEPVAMVRNEEQGPEL 61 (236)
T ss_dssp CEEEE-ETTTSHHHHHHHHHHHH---------TTCEEEEEESSGGGHHHH
T ss_pred CeEEE-ECCCChHHHHHHHHHHh---------CCCeEEEEECChHHHHHH
Confidence 45554 45788899999888743 478899999988765443
No 383
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=69.19 E-value=19 Score=26.79 Aligned_cols=43 Identities=7% Similarity=-0.033 Sum_probs=32.3
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=|-.|+|.++.++++.+.. .+.+++.++.+..-.+.+.+.+..
T Consensus 16 lITGas~GIG~~~a~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 58 (311)
T 3o26_A 16 VVTGGNKGIGFEICKQLSS---------NGIMVVLTCRDVTKGHEAVEKLKN 58 (311)
T ss_dssp EESSCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHT
T ss_pred EEecCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3556678888888887743 478999999999887777666653
No 384
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=68.94 E-value=7.9 Score=30.38 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=26.2
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||=.|+ +.|..+..+++.. +.+++++. +++-++.+++
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~------------Ga~Vi~~~-~~~~~~~~~~ 206 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLS------------GYIPIATC-SPHNFDLAKS 206 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT------------TCEEEEEE-CGGGHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCEEEEEe-CHHHHHHHHH
Confidence 4666776 3677777777765 67888875 7777776653
No 385
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=68.24 E-value=22 Score=26.59 Aligned_cols=47 Identities=11% Similarity=-0.019 Sum_probs=36.0
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF 58 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~ 58 (167)
+.=+-.|++.++++++..+.. .+.+++.+|.+++.++...+.++..+
T Consensus 9 valVTGas~GIG~aiA~~la~---------~Ga~Vv~~~~~~~~~~~~~~~i~~~g 55 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFAL---------NDSIVVAVELLEDRLNQIVQELRGMG 55 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCHHHHHHHHHHHH---------cCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 444566777888888887643 58999999999999888888776543
No 386
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=68.13 E-value=23 Score=25.34 Aligned_cols=45 Identities=4% Similarity=-0.105 Sum_probs=33.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
++.=+-.|+|.++.++++++.. .+.+++.++.+.+.++...+.+.
T Consensus 3 k~vlITGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 47 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALAR---------DGYALALGARSVDRLEKIAHELM 47 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3344556778888888888743 47889999999888777766554
No 387
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=67.87 E-value=6.6 Score=30.83 Aligned_cols=41 Identities=20% Similarity=0.171 Sum_probs=32.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
|+|+=+|| |.++..++..+. ...+++.+|.+...++.+++.
T Consensus 17 mkilvlGa--G~vG~~~~~~L~----------~~~~v~~~~~~~~~~~~~~~~ 57 (365)
T 3abi_A 17 MKVLILGA--GNIGRAIAWDLK----------DEFDVYIGDVNNENLEKVKEF 57 (365)
T ss_dssp CEEEEECC--SHHHHHHHHHHT----------TTSEEEEEESCHHHHHHHTTT
T ss_pred cEEEEECC--CHHHHHHHHHHh----------cCCCeEEEEcCHHHHHHHhcc
Confidence 78999987 778888888875 356789999998887766543
No 388
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=66.95 E-value=17 Score=26.69 Aligned_cols=40 Identities=13% Similarity=-0.089 Sum_probs=29.0
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+-.|+|.++.++++.+.. .+.+++.++.++...+...+.+
T Consensus 12 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l 51 (267)
T 2gdz_A 12 VTGAAQGIGRAFAEALLL---------KGAKVALVDWNLEAGVQCKAAL 51 (267)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHH
Confidence 455788888888887643 4788999999887665554444
No 389
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=66.43 E-value=5.9 Score=30.33 Aligned_cols=17 Identities=18% Similarity=0.204 Sum_probs=14.2
Q ss_pred HHHHHHhcCCCcEEEEE
Q psy889 139 LSEAYRVLKPGGRFLCL 155 (167)
Q Consensus 139 l~~~~~~LkpgG~l~~~ 155 (167)
+.+..+.|+++|.++..
T Consensus 228 ~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 228 GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HHHHGGGEEEEEEEEEC
T ss_pred HHHHHHhccCCCEEEEe
Confidence 37788999999999875
No 390
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=66.33 E-value=8.4 Score=27.63 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=31.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
|+|+=+|+ |.++..+++.+.. .+.+++++|.+++.++...+
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~---------~g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLS---------RKYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHH
Confidence 67777775 7888888887742 36789999999988776543
No 391
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=66.23 E-value=15 Score=27.22 Aligned_cols=40 Identities=10% Similarity=-0.020 Sum_probs=27.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~ 51 (167)
|+|.=+|+ |.++..++..+.. .+.+++++|.+++.++.+.
T Consensus 1 m~i~iiG~--G~~G~~~a~~l~~---------~g~~V~~~~~~~~~~~~~~ 40 (279)
T 2f1k_A 1 MKIGVVGL--GLIGASLAGDLRR---------RGHYLIGVSRQQSTCEKAV 40 (279)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEcC--cHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHH
Confidence 67887876 5566666655431 2568999999988766554
No 392
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=64.96 E-value=32 Score=25.34 Aligned_cols=42 Identities=7% Similarity=-0.103 Sum_probs=27.3
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.++++.+.. .+.+++.++. +....+...+.+..
T Consensus 23 VTGas~gIG~aia~~l~~---------~G~~V~~~~~~~~~~~~~~~~~~~~ 65 (270)
T 3is3_A 23 VTGSGRGIGAAVAVHLGR---------LGAKVVVNYANSTKDAEKVVSEIKA 65 (270)
T ss_dssp ESCTTSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHH---------CCCEEEEEcCCCHHHHHHHHHHHHh
Confidence 455678888888887643 4788888765 45555555555443
No 393
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=64.44 E-value=8.5 Score=30.41 Aligned_cols=39 Identities=23% Similarity=0.142 Sum_probs=29.1
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCC-cEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..+++.. +. +++++|.+++-++.+++
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~------------Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLL------------GAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHHC------------CCCeEEEEcCCHHHHHHHHH
Confidence 577788654 56666666655 56 69999999998888864
No 394
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=63.71 E-value=21 Score=23.07 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=12.6
Q ss_pred CeEEeeecCCCchHHHHHHhh
Q psy889 1 MYILFYLVFPGDIAFRFLNYV 21 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~ 21 (167)
|+|| +.|+.|..|..+++++
T Consensus 7 mkIl-L~C~aGmSTsllv~km 26 (108)
T 3nbm_A 7 LKVL-VLCAGSGTSAQLANAI 26 (108)
T ss_dssp EEEE-EEESSSSHHHHHHHHH
T ss_pred ceEE-EECCCCCCHHHHHHHH
Confidence 4566 4566776666677654
No 395
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=63.35 E-value=27 Score=25.87 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=26.9
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC-hHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+ ....+...+.++
T Consensus 35 lVTGas~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~l~ 77 (271)
T 3v2g_A 35 FVTGGSRGIGAAIAKRLAL---------EGAAVALTYVNAAERAQAVVSEIE 77 (271)
T ss_dssp EEETTTSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCCHHHHHHHHHHHH
Confidence 3455678888888887643 47888887654 455555554444
No 396
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.11 E-value=8.9 Score=23.99 Aligned_cols=40 Identities=28% Similarity=0.180 Sum_probs=28.6
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCC-CcEEEeeCChHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGE 51 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~a~ 51 (167)
++|+=+|+ |.++..++..+.. .+ .+++++|.++...+...
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~---------~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKT---------SSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHH---------CSSEEEEEEESCHHHHHHHH
T ss_pred CeEEEECC--CHHHHHHHHHHHh---------CCCceEEEEeCCHHHHHHHH
Confidence 36777776 7788888777642 35 67999999987665554
No 397
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=63.11 E-value=29 Score=25.49 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=32.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+..
T Consensus 14 lVTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 56 (262)
T 3pk0_A 14 VVTGGTKGIGRGIATVFAR---------AGANVAVAGRSTADIDACVADLDQ 56 (262)
T ss_dssp EETTCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHT
T ss_pred EEECCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3556778888888887643 478999999999888777766654
No 398
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=63.09 E-value=7.2 Score=36.44 Aligned_cols=42 Identities=7% Similarity=-0.081 Sum_probs=34.3
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCC--cEEEeeCChHHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAP--HVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~D~s~~~~~~a~~~~~ 55 (167)
++++|+.||.|+++.-+.++ +. .+.++|+++.+++.-+.+..
T Consensus 852 l~viDLFsG~GGlslGfe~A-------------G~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQA-------------GISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHT-------------TSEEEEEEECCSHHHHHHHHHHCT
T ss_pred ceEEecccCccHHHHHHHHC-------------CCCceEEEEECCHHHHHHHHHhCC
Confidence 47999999999999998763 33 47799999999988877653
No 399
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=62.78 E-value=32 Score=24.85 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=32.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.++++++.. .+.+++.+|.++..++...+.+..
T Consensus 14 ITGas~giG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 55 (253)
T 3qiv_A 14 VTGSGGGIGQAYAEALAR---------EGAAVVVADINAEAAEAVAKQIVA 55 (253)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHHh
Confidence 455778888888887743 478999999999888877766654
No 400
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=62.14 E-value=24 Score=25.83 Aligned_cols=44 Identities=9% Similarity=-0.165 Sum_probs=33.0
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+...
T Consensus 11 lVTGas~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~ 54 (252)
T 3h7a_A 11 AVIGAGDYIGAEIAKKFAA---------EGFTVFAGRRNGEKLAPLVAEIEAA 54 (252)
T ss_dssp EEECCSSHHHHHHHHHHHH---------TTCEEEEEESSGGGGHHHHHHHHHT
T ss_pred EEECCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 3556677888888887743 4789999999998888777766543
No 401
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=61.55 E-value=9.3 Score=29.99 Aligned_cols=39 Identities=10% Similarity=0.125 Sum_probs=29.1
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+|. |..+..+++.. +.+++++|.+++-++.+++
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~------------Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAM------------GAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESSGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHH
Confidence 577788753 55555666554 7789999999998888875
No 402
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=60.46 E-value=26 Score=26.21 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=35.9
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcc
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF 58 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~ 58 (167)
+.=+-.|++.++++++..+.. .+.+++.+|.+++.++.+.+.+...+
T Consensus 11 valVTGas~GIG~aia~~la~---------~Ga~Vvi~~~~~~~~~~~~~~l~~~g 57 (255)
T 4g81_D 11 TALVTGSARGLGFAYAEGLAA---------AGARVILNDIRATLLAESVDTLTRKG 57 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHH---------TTCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 444566778888888887753 58999999999998888877776543
No 403
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.79 E-value=11 Score=26.03 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=28.0
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCC-CCcEEEeeCChHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~a~ 51 (167)
+|+=+| .|.++..+++.+.. . +.+++++|.+++.++.++
T Consensus 41 ~v~IiG--~G~~G~~~a~~L~~---------~~g~~V~vid~~~~~~~~~~ 80 (183)
T 3c85_A 41 QVLILG--MGRIGTGAYDELRA---------RYGKISLGIEIREEAAQQHR 80 (183)
T ss_dssp SEEEEC--CSHHHHHHHHHHHH---------HHCSCEEEEESCHHHHHHHH
T ss_pred cEEEEC--CCHHHHHHHHHHHh---------ccCCeEEEEECCHHHHHHHH
Confidence 466555 57788888776642 3 568999999998776655
No 404
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=59.36 E-value=41 Score=24.58 Aligned_cols=42 Identities=7% Similarity=-0.009 Sum_probs=31.8
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.+++..+.. .+.+++.++.+.+.++...+.+..
T Consensus 16 VTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 57 (264)
T 3ucx_A 16 ISGVGPALGTTLARRCAE---------QGADLVLAARTVERLEDVAKQVTD 57 (264)
T ss_dssp EESCCTTHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHH---------CcCEEEEEeCCHHHHHHHHHHHHh
Confidence 455677788888877643 488999999999888777766654
No 405
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=58.69 E-value=34 Score=24.56 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=30.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++++.. .+.++++++.++...+...+.+.
T Consensus 16 VtGasggiG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 56 (255)
T 1fmc_A 16 ITGAGAGIGKEIAITFAT---------AGASVVVSDINADAANHVVDEIQ 56 (255)
T ss_dssp ETTTTSHHHHHHHHHHHT---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCccHHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 456788999999888753 47889999999877665555443
No 406
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=58.66 E-value=7.7 Score=30.66 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=27.0
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~ 51 (167)
|+|-=+|+ |.++..++..+.. .+.++++.|.+++.++.+.
T Consensus 23 mkIgiIGl--G~mG~~~A~~L~~---------~G~~V~v~dr~~~~~~~l~ 62 (358)
T 4e21_A 23 MQIGMIGL--GRMGADMVRRLRK---------GGHECVVYDLNVNAVQALE 62 (358)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECc--hHHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHH
Confidence 45666665 5676666665532 3678999999988766554
No 407
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=58.37 E-value=37 Score=24.79 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=32.1
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.++++.+.. .+.+++.++.+...++...+.+..
T Consensus 34 ITGas~gIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 75 (262)
T 3rkr_A 34 VTGASRGIGAAIARKLGS---------LGARVVLTARDVEKLRAVEREIVA 75 (262)
T ss_dssp ESSTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHH
Confidence 445678888888887743 478899999999888777766654
No 408
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=57.84 E-value=32 Score=25.50 Aligned_cols=32 Identities=13% Similarity=-0.043 Sum_probs=23.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+..
T Consensus 33 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~ 64 (283)
T 1g0o_A 33 LVTGAGRGIGREMAMELGR---------RGCKVIVNYANST 64 (283)
T ss_dssp EETTTTSHHHHHHHHHHHH---------TTCEEEEEESSCH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCch
Confidence 3556788888888887743 4788999888754
No 409
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=57.66 E-value=14 Score=28.39 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=29.7
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+|. |..+..++++.. +.+++++|.+++-++.+++
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g-----------~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVS-----------AARVIAVDLDDDRLALARE 214 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC-----------CCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEEcCCHHHHHHHHH
Confidence 567777654 666666776653 6789999999998888865
No 410
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=57.51 E-value=40 Score=24.93 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=33.0
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+..
T Consensus 7 ~lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~l~~ 50 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELGV---------AGAKILLGARRQARIEAIATEIRD 50 (264)
T ss_dssp EEESSTTSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHh
Confidence 33556778888888887643 488999999999888877766654
No 411
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=57.48 E-value=45 Score=24.42 Aligned_cols=46 Identities=13% Similarity=0.084 Sum_probs=31.9
Q ss_pred EEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 3 ILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 3 vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+|=-|+++ -.+++++++.+.+ .+.+++.++.+++.++.+.+.++..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~---------~Ga~Vvi~~r~~~~~~~~~~~~~~~ 55 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQ---------LGAKLVFTYRKERSRKELEKLLEQL 55 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHGGG
T ss_pred EEEECCCCCchHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhc
Confidence 34344433 2677777776642 5899999999998888887776544
No 412
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=57.13 E-value=46 Score=23.84 Aligned_cols=43 Identities=12% Similarity=0.042 Sum_probs=32.3
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+-.|+|.++.++++++.. .+.+++.++.++...+...+.+...
T Consensus 10 ITGas~gIG~~~a~~l~~---------~G~~v~~~~r~~~~~~~~~~~~~~~ 52 (247)
T 3lyl_A 10 VTGASRGIGFEVAHALAS---------KGATVVGTATSQASAEKFENSMKEK 52 (247)
T ss_dssp ESSCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHHT
T ss_pred EECCCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 445778888888887743 4789999999998887777666543
No 413
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=56.59 E-value=44 Score=25.07 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=32.8
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+-.|+|.++.++++.+.. .+.+++.++.+...++.+.+.+...
T Consensus 36 VTGas~gIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~ 78 (301)
T 3tjr_A 36 VTGGASGIGLATATEFAR---------RGARLVLSDVDQPALEQAVNGLRGQ 78 (301)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred EeCCCCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhc
Confidence 456678888888887743 4789999999998888877766543
No 414
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=56.42 E-value=45 Score=24.69 Aligned_cols=43 Identities=9% Similarity=0.007 Sum_probs=32.3
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+..
T Consensus 28 lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~l~~ 70 (279)
T 3sju_A 28 FVTGVSSGIGLAVARTLAA---------RGIAVYGCARDAKNVSAAVDGLRA 70 (279)
T ss_dssp EEESTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3556778888888887643 488999999998887777766643
No 415
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=56.19 E-value=38 Score=25.17 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=32.5
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.+++.++...+.+..
T Consensus 37 lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~ 79 (281)
T 4dry_A 37 LVTGGGTGVGRGIAQALSA---------EGYSVVITGRRPDVLDAAAGEIGG 79 (281)
T ss_dssp EETTTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHh
Confidence 3556778888888887743 488999999999887777666643
No 416
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=56.16 E-value=29 Score=26.19 Aligned_cols=44 Identities=11% Similarity=0.016 Sum_probs=32.7
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.+|.+...++...+.+..
T Consensus 44 vlVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~l~~ 87 (293)
T 3rih_A 44 VLVTGGTKGIGRGIATVFAR---------AGANVAVAARSPRELSSVTAELGE 87 (293)
T ss_dssp EEETTTTSHHHHHHHHHHHH---------TTCEEEEEESSGGGGHHHHHHHTT
T ss_pred EEEeCCCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHh
Confidence 33556778888888887743 478999999998887777666543
No 417
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=56.13 E-value=34 Score=24.98 Aligned_cols=41 Identities=7% Similarity=0.011 Sum_probs=31.6
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.+++.++.+.+.+.
T Consensus 11 VTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 51 (257)
T 3imf_A 11 ITGGSSGMGKGMATRFAK---------EGARVVITGRTKEKLEEAKLEIE 51 (257)
T ss_dssp ETTTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHC
T ss_pred EECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456778888888887743 48899999999988887776654
No 418
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=55.86 E-value=34 Score=27.01 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=55.9
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhcccCCCCCCcccccccccccCCCCC
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 81 (167)
+||.++.+-|.++..++.+ .. ....| |--.-...+.++...+..
T Consensus 41 ~~~~~~d~~gal~~~~~~~-------------~~-~~~~d-s~~~~~~~~~n~~~~~~~--------------------- 84 (375)
T 4dcm_A 41 PVLILNDAFGALSCALAEH-------------KP-YSIGD-SYISELATRENLRLNGID--------------------- 84 (375)
T ss_dssp CEEEECCSSSHHHHHTGGG-------------CC-EEEES-CHHHHHHHHHHHHHTTCC---------------------
T ss_pred CEEEECCCCCHHHHhhccC-------------Cc-eEEEh-HHHHHHHHHHHHHHcCCC---------------------
Confidence 6899999999998888652 12 22245 554555666666554430
Q ss_pred CCCceeeeeeccccccCCCCceEEeecccCCCCCCccchhhHhhhhcccccccHHHHHHHHHHhcCCCcEEEEEe
Q psy889 82 DSYSAYTIAFGIRNIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 82 ~~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (167)
...+.+... .+. ....+|+|+.... .........|.++...|++|+.+++..
T Consensus 85 ------------------~~~~~~~~~-~~~---~~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 85 ------------------ESSVKFLDS-TAD---YPQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp ------------------GGGSEEEET-TSC---CCSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred ------------------ccceEeccc-ccc---cccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 012333222 112 2244777765321 234456677788888899999887654
No 419
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=55.84 E-value=16 Score=29.44 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=30.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
++|+=+|+ |.++..+++.+.. .+..++++|.+++.++.+++
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~---------~g~~vvvId~d~~~v~~~~~ 45 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLS---------SGVKMVVLDHDPDHIETLRK 45 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHH---------TTCCEEEEECCHHHHHHHHH
T ss_pred CeEEEECC--CHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHh
Confidence 34555554 7788888887742 37789999999999888764
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=55.81 E-value=32 Score=25.60 Aligned_cols=42 Identities=14% Similarity=0.129 Sum_probs=26.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
|+|.=+|+ +|.++..++..+.. .+.+++++|.+++.++.+.+
T Consensus 12 m~I~iIG~-tG~mG~~la~~l~~---------~g~~V~~~~r~~~~~~~~~~ 53 (286)
T 3c24_A 12 KTVAILGA-GGKMGARITRKIHD---------SAHHLAAIEIAPEGRDRLQG 53 (286)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHH---------SSSEEEEECCSHHHHHHHHH
T ss_pred CEEEEECC-CCHHHHHHHHHHHh---------CCCEEEEEECCHHHHHHHHh
Confidence 36666765 15566666655431 35689999999877665543
No 421
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=55.29 E-value=52 Score=24.25 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=31.7
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
.=+-.|+|.++.++++.+.. .+.+++.++.+....+...+.+.
T Consensus 30 ~lVTGas~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 72 (277)
T 4fc7_A 30 AFITGGGSGIGFRIAEIFMR---------HGCHTVIASRSLPRVLTAARKLA 72 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHT---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 33556778888888888743 47899999999877766665553
No 422
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=55.24 E-value=50 Score=24.20 Aligned_cols=41 Identities=15% Similarity=0.031 Sum_probs=30.7
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++..+++.+.. .+.++++++.++..++...+.++
T Consensus 36 ITGasggIG~~la~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~ 76 (272)
T 1yb1_A 36 ITGAGHGIGRLTAYEFAK---------LKSKLVLWDINKHGLEETAAKCK 76 (272)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHH---------CCCEEEEEEcCHHHHHHHHHHHH
Confidence 456778899998887743 47889999999877766655554
No 423
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=54.82 E-value=47 Score=24.68 Aligned_cols=42 Identities=7% Similarity=-0.138 Sum_probs=31.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.+.+.++...+.+.
T Consensus 32 lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~l~ 73 (283)
T 3v8b_A 32 LITGAGSGIGRATALALAA---------DGVTVGALGRTRTEVEEVADEIV 73 (283)
T ss_dssp EEESCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHT
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3556778888888887643 47899999999888777766654
No 424
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=54.79 E-value=44 Score=24.50 Aligned_cols=43 Identities=7% Similarity=0.060 Sum_probs=32.4
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+...++.+.+.+..
T Consensus 24 lVTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 66 (266)
T 4egf_A 24 LITGATKGIGADIARAFAA---------AGARLVLSGRDVSELDAARRALGE 66 (266)
T ss_dssp EETTTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3556778888888887743 478999999998888777766643
No 425
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=54.50 E-value=54 Score=23.55 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=30.2
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++++.. .+.+++.++.++...+...+.+.
T Consensus 18 ItGasggiG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~ 58 (260)
T 3awd_A 18 VTGGAQNIGLACVTALAE---------AGARVIIADLDEAMATKAVEDLR 58 (260)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EeCCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456788899988887743 47889999998877665555543
No 426
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=54.33 E-value=14 Score=30.25 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=33.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
|+|+=+|| |.++..+++.+.. .+..++.+|.+++.++.+.+++
T Consensus 4 M~iiI~G~--G~vG~~la~~L~~---------~~~~v~vId~d~~~~~~~~~~~ 46 (461)
T 4g65_A 4 MKIIILGA--GQVGGTLAENLVG---------ENNDITIVDKDGDRLRELQDKY 46 (461)
T ss_dssp EEEEEECC--SHHHHHHHHHTCS---------TTEEEEEEESCHHHHHHHHHHS
T ss_pred CEEEEECC--CHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHHhc
Confidence 66765555 6799999998742 3678999999999988877654
No 427
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=54.26 E-value=52 Score=24.03 Aligned_cols=41 Identities=15% Similarity=0.034 Sum_probs=26.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCc-EEEeeCChHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH-VTVADINRAMLDVGEQ 52 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~D~s~~~~~~a~~ 52 (167)
|+|.=+|+ |.++..++..+.. .+.+ ++++|.+++..+...+
T Consensus 11 m~i~iiG~--G~mG~~~a~~l~~---------~g~~~v~~~~~~~~~~~~~~~ 52 (266)
T 3d1l_A 11 TPIVLIGA--GNLATNLAKALYR---------KGFRIVQVYSRTEESARELAQ 52 (266)
T ss_dssp CCEEEECC--SHHHHHHHHHHHH---------HTCCEEEEECSSHHHHHHHHH
T ss_pred CeEEEEcC--CHHHHHHHHHHHH---------CCCeEEEEEeCCHHHHHHHHH
Confidence 46777776 5566666655421 2455 8899999887766554
No 428
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=54.15 E-value=18 Score=27.76 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=29.0
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+ |.|..+..++... +.++++++.+++.++.+++
T Consensus 169 ~vlV~Gasg~iG~~~~~~a~~~------------G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 169 DVLVMAAGSGVSVAAIQIAKLF------------GARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp EEEECSTTSTTHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHh
Confidence 6788886 4556666666554 6799999999988888764
No 429
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=54.01 E-value=44 Score=24.23 Aligned_cols=44 Identities=9% Similarity=-0.008 Sum_probs=32.8
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+..
T Consensus 15 vlVTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 58 (252)
T 3f1l_A 15 ILVTGASDGIGREAAMTYAR---------YGATVILLGRNEEKLRQVASHINE 58 (252)
T ss_dssp EEEESTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 33556778888888887643 488999999998888777666543
No 430
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=53.45 E-value=49 Score=23.63 Aligned_cols=43 Identities=9% Similarity=-0.067 Sum_probs=33.0
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
+-.|+|.++.++++++.. .+.+++.++.++..++...+.+...
T Consensus 19 ITGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~ 61 (247)
T 3i1j_A 19 VTGAARGIGAAAARAYAA---------HGASVVLLGRTEASLAEVSDQIKSA 61 (247)
T ss_dssp ESSTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred EeCCCChHHHHHHHHHHH---------CCCEEEEEecCHHHHHHHHHHHHhc
Confidence 455678888888887743 4789999999998888877766543
No 431
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=53.27 E-value=59 Score=23.43 Aligned_cols=42 Identities=10% Similarity=-0.074 Sum_probs=30.9
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+.
T Consensus 11 lVTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~ 52 (247)
T 2jah_A 11 LITGASSGIGEATARALAA---------EGAAVAIAARRVEKLRALGDELT 52 (247)
T ss_dssp EEESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHH
Confidence 3455778888888887743 47889999999887776665554
No 432
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.18 E-value=40 Score=25.02 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=31.9
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.++++.+.+ .+.+++.++.+++.++...+.+..
T Consensus 37 VTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~ 78 (276)
T 3r1i_A 37 ITGASTGIGKKVALAYAE---------AGAQVAVAARHSDALQVVADEIAG 78 (276)
T ss_dssp EESTTSHHHHHHHHHHHH---------TTCEEEEEESSGGGGHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 556778888888887743 478999999998887777766654
No 433
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=53.05 E-value=49 Score=24.43 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=31.1
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
|| +-.|+|.++.++++.+.. .+.++++++.++..++...+.+.
T Consensus 31 vl-ITGasggIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 73 (286)
T 1xu9_A 31 VI-VTGASKGIGREMAYHLAK---------MGAHVVVTARSKETLQKVVSHCL 73 (286)
T ss_dssp EE-ESSCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EE-EeCCCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHH
Confidence 44 445678888888887642 47889999999887776655544
No 434
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=52.97 E-value=42 Score=24.46 Aligned_cols=43 Identities=14% Similarity=0.090 Sum_probs=32.0
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.+.+..+...+.+..
T Consensus 16 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 58 (256)
T 3gaf_A 16 IVTGAAAGIGRAIAGTFAK---------AGASVVVTDLKSEGAEAVAAAIRQ 58 (256)
T ss_dssp EECSCSSHHHHHHHHHHHH---------HTCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3556778888888887642 478899999998887777766654
No 435
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=52.90 E-value=36 Score=24.38 Aligned_cols=44 Identities=14% Similarity=0.081 Sum_probs=30.2
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC-hHHHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVGEQRAR 55 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~a~~~~~ 55 (167)
+|| +-.|+|.++.++++.+.. .+.+++.++.+ +..++...+.+.
T Consensus 9 ~vl-VTGasggiG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 53 (258)
T 3afn_B 9 RVL-ITGSSQGIGLATARLFAR---------AGAKVGLHGRKAPANIDETIASMR 53 (258)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHH---------TTCEEEEEESSCCTTHHHHHHHHH
T ss_pred EEE-EeCCCChHHHHHHHHHHH---------CCCEEEEECCCchhhHHHHHHHHH
Confidence 344 556788899888887743 47889999987 665555554443
No 436
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=52.67 E-value=61 Score=23.51 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=28.5
Q ss_pred cCCC-chHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 8 VFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 8 ~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.|+| .++.++++++.. .+.+++.++.+...++...+.+..
T Consensus 29 Gasg~GIG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 69 (266)
T 3o38_A 29 AAAGTGIGSTTARRALL---------EGADVVISDYHERRLGETRDQLAD 69 (266)
T ss_dssp SCSSSSHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHHH---------CCCEEEEecCCHHHHHHHHHHHHh
Confidence 3444 577777776642 478899999999888777766643
No 437
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=52.21 E-value=63 Score=23.57 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=32.9
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+..
T Consensus 11 ~lVTGas~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 54 (265)
T 3lf2_A 11 AVVTGGSSGIGLATVELLLE---------AGAAVAFCARDGERLRAAESALRQ 54 (265)
T ss_dssp EEEETCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 33556778888888887643 478999999999888777766654
No 438
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=51.89 E-value=23 Score=27.15 Aligned_cols=39 Identities=18% Similarity=0.399 Sum_probs=27.6
Q ss_pred eEEeeecC-CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+| .|..+..+++.. +.+++++|.+++-++.+++
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAM------------GLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------------TCEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHH
Confidence 67778874 344455555543 7799999999988887764
No 439
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=51.35 E-value=44 Score=24.70 Aligned_cols=43 Identities=5% Similarity=0.010 Sum_probs=32.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+..
T Consensus 30 lVTGas~gIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~l~~ 72 (271)
T 4ibo_A 30 LVTGSSRGLGRAMAEGLAV---------AGARILINGTDPSRVAQTVQEFRN 72 (271)
T ss_dssp EETTCSSHHHHHHHHHHHH---------TTCEEEECCSCHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3556778888888887743 478999999999888777766654
No 440
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=51.30 E-value=14 Score=28.74 Aligned_cols=39 Identities=5% Similarity=-0.107 Sum_probs=28.9
Q ss_pred eEEeeecC-CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+| .|..+..+++.. +.+++++|.+++-++.+++
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~------------Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAM------------GAETYVISRSSRKREDAMK 221 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCEEEEEESSSTTHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEcCCHHHHHHHHH
Confidence 67888864 255566666655 6789999999988888875
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=51.11 E-value=51 Score=25.03 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=32.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=|-.|+|.++.++++.+.. .+.++++++.+...++.+.+.+..
T Consensus 12 lVTGas~gIG~~la~~l~~---------~G~~Vv~~~r~~~~~~~~~~~l~~ 54 (319)
T 3ioy_A 12 FVTGGANGVGIGLVRQLLN---------QGCKVAIADIRQDSIDKALATLEA 54 (319)
T ss_dssp EEETTTSTHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEcCCchHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHh
Confidence 3455678888888887743 478999999999888877766654
No 442
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=50.72 E-value=10 Score=29.46 Aligned_cols=43 Identities=14% Similarity=0.276 Sum_probs=28.7
Q ss_pred cchhhHhhhhc----ccc-c--cc----HHHHHHHHHHhcCCCcEEEEEeeccc
Q psy889 118 DSYSAYTIAFG----IRN-V--TR----IDKALSEAYRVLKPGGRFLCLEFSHV 160 (167)
Q Consensus 118 ~~~D~v~~~~~----~~~-~--~~----~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (167)
+.+|+|++... -|+ - .| +.-+++-+.++|+|||.|++--+.-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 66899887432 122 1 12 22256788999999999999777655
No 443
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=50.40 E-value=57 Score=23.67 Aligned_cols=41 Identities=17% Similarity=0.015 Sum_probs=30.5
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 10 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 50 (260)
T 2qq5_A 10 VTGASRGIGRGIALQLCK---------AGATVYITGRHLDTLRVVAQEAQ 50 (260)
T ss_dssp ESSTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EeCCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456778888888887743 47889999999877766655554
No 444
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.38 E-value=20 Score=27.13 Aligned_cols=40 Identities=18% Similarity=-0.124 Sum_probs=27.6
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~ 51 (167)
+|| +-.|+|.++.++++.+.. .+.++++++.+........
T Consensus 7 ~vl-VTGatG~iG~~l~~~L~~---------~G~~V~~~~r~~~~~~~~~ 46 (341)
T 3enk_A 7 TIL-VTGGAGYIGSHTAVELLA---------HGYDVVIADNLVNSKREAI 46 (341)
T ss_dssp EEE-EETTTSHHHHHHHHHHHH---------TTCEEEEECCCSSSCTHHH
T ss_pred EEE-EecCCcHHHHHHHHHHHH---------CCCcEEEEecCCcchHHHH
Confidence 455 456789999999887743 4788999987654443333
No 445
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=50.22 E-value=65 Score=23.35 Aligned_cols=41 Identities=12% Similarity=0.027 Sum_probs=30.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 14 VTGas~giG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 54 (260)
T 2ae2_A 14 VTGGSRGIGYGIVEELAS---------LGASVYTCSRNQKELNDCLTQWR 54 (260)
T ss_dssp EESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 556788888888887743 47889999999877766555543
No 446
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=50.01 E-value=43 Score=24.93 Aligned_cols=42 Identities=12% Similarity=-0.055 Sum_probs=31.5
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 12 lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~ 53 (280)
T 3tox_A 12 IVTGASSGIGRAAALLFAR---------EGAKVVVTARNGNALAELTDEIA 53 (280)
T ss_dssp EESSTTSHHHHHHHHHHHH---------TTCEEEECCSCHHHHHHHHHHHT
T ss_pred EEECCCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHH
Confidence 3556678888888887643 48899999999888777766554
No 447
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=49.49 E-value=70 Score=23.51 Aligned_cols=42 Identities=14% Similarity=0.047 Sum_probs=30.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.++
T Consensus 26 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~ 67 (277)
T 2rhc_B 26 LVTGATSGIGLEIARRLGK---------EGLRVFVCARGEEGLRTTLKELR 67 (277)
T ss_dssp EEETCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3456778888888887743 47889999999877766655554
No 448
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=49.09 E-value=58 Score=23.99 Aligned_cols=45 Identities=7% Similarity=-0.154 Sum_probs=33.3
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHhc
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~~ 57 (167)
.=+-.|+|.++.+++..+.. .+.+++.++.++...+...+.+...
T Consensus 31 ~lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~ 75 (270)
T 3ftp_A 31 AIVTGASRGIGRAIALELAR---------RGAMVIGTATTEAGAEGIGAAFKQA 75 (270)
T ss_dssp EEETTCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 33556788888888887643 4789999999988877776666543
No 449
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=48.76 E-value=65 Score=23.08 Aligned_cols=43 Identities=7% Similarity=-0.109 Sum_probs=31.5
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+.=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~ 47 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVE---------RGHQVSMMGRRYQRLQQQELLL 47 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHh
Confidence 333556778888888887643 4889999999988777666554
No 450
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=48.68 E-value=67 Score=23.63 Aligned_cols=43 Identities=12% Similarity=-0.072 Sum_probs=32.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.++..++...+.+..
T Consensus 15 lVTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 57 (281)
T 3svt_A 15 LVTGGGSGIGKGVAAGLVA---------AGASVMIVGRNPDKLAGAVQELEA 57 (281)
T ss_dssp EEETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHT
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3556778888888887643 488999999999888777766654
No 451
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=48.67 E-value=67 Score=23.92 Aligned_cols=42 Identities=14% Similarity=0.028 Sum_probs=29.5
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
+|| +-.|+|.++.++++++.. .+.++++++.+....+...+.
T Consensus 13 ~vl-VTGatG~iG~~l~~~L~~---------~g~~V~~~~r~~~~~~~~~~~ 54 (342)
T 1y1p_A 13 LVL-VTGANGFVASHVVEQLLE---------HGYKVRGTARSASKLANLQKR 54 (342)
T ss_dssp EEE-EETTTSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHH
T ss_pred EEE-EECCccHHHHHHHHHHHH---------CCCEEEEEeCCcccHHHHHHH
Confidence 455 446789999999887742 477899999887665544433
No 452
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=48.63 E-value=75 Score=23.27 Aligned_cols=41 Identities=15% Similarity=0.028 Sum_probs=30.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.+++..+.. .+.+++.++.+++.++...+.+.
T Consensus 26 VTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 66 (273)
T 1ae1_A 26 VTGGSKGIGYAIVEELAG---------LGARVYTCSRNEKELDECLEIWR 66 (273)
T ss_dssp EESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCcchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 455788888888887743 47899999999877766655544
No 453
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=48.26 E-value=28 Score=26.93 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=13.7
Q ss_pred HHHHHhcCCCcEEEEEe
Q psy889 140 SEAYRVLKPGGRFLCLE 156 (167)
Q Consensus 140 ~~~~~~LkpgG~l~~~~ 156 (167)
.+..+.|+++|.++..-
T Consensus 254 ~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 254 TELLRQLARGGTMVTYG 270 (357)
T ss_dssp HHHHTTSCTTCEEEECC
T ss_pred HHHHHhhCCCCEEEEEe
Confidence 45789999999998753
No 454
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=48.26 E-value=25 Score=24.75 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=27.2
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA 45 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~ 45 (167)
|+||=. .|+|.++..+++.+.. .+.++++++.++.
T Consensus 1 M~ilIt-GatG~iG~~l~~~L~~---------~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 1 MKIFIV-GSTGRVGKSLLKSLST---------TDYQIYAGARKVE 35 (219)
T ss_dssp CEEEEE-STTSHHHHHHHHHHTT---------SSCEEEEEESSGG
T ss_pred CeEEEE-CCCCHHHHHHHHHHHH---------CCCEEEEEECCcc
Confidence 778755 4789999999998853 4678999998764
No 455
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=48.16 E-value=67 Score=23.72 Aligned_cols=41 Identities=5% Similarity=-0.003 Sum_probs=30.3
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++++.. .+.+++.++.++..++...+.+.
T Consensus 31 ITGasggiG~~la~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~ 71 (302)
T 1w6u_A 31 ITGGGTGLGKGMTTLLSS---------LGAQCVIASRKMDVLKATAEQIS 71 (302)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456778888888887743 47889999999877766555543
No 456
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=47.93 E-value=74 Score=23.08 Aligned_cols=41 Identities=20% Similarity=0.239 Sum_probs=30.5
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 12 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 52 (262)
T 1zem_A 12 VTGAGGNIGLATALRLAE---------EGTAIALLDMNREALEKAEASVR 52 (262)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 556778888888887743 47889999999877766655553
No 457
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=47.81 E-value=76 Score=23.20 Aligned_cols=43 Identities=7% Similarity=-0.041 Sum_probs=31.3
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++..+++.+.. .+.++++++.++..++...+.+..
T Consensus 36 lVTGasggIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 78 (279)
T 1xg5_A 36 LVTGASGGIGAAVARALVQ---------QGLKVVGCARTVGNIEELAAECKS 78 (279)
T ss_dssp EEESTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEECCCchHHHHHHHHHHH---------CCCEEEEEECChHHHHHHHHHHHh
Confidence 3556788888888887743 478899999998777666555543
No 458
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=47.50 E-value=16 Score=28.15 Aligned_cols=39 Identities=10% Similarity=0.041 Sum_probs=26.8
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+ |.|..+..++... +.+++++|.+++..+.+++
T Consensus 172 ~vlV~Ga~ggiG~~~~~~a~~~------------Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 172 WVAISGAAGGLGSLAVQYAKAM------------GYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------------TCEEEEEECSTTHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC------------CCcEEEEcCCHHHHHHHHH
Confidence 6788886 3445555555443 7799999998887776654
No 459
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=47.41 E-value=44 Score=24.76 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=32.7
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.+|.++...+...+.+..
T Consensus 36 ~lVTGas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~ 79 (275)
T 4imr_A 36 ALVTGSSRGIGAAIAEGLAG---------AGAHVILHGVKPGSTAAVQQRIIA 79 (275)
T ss_dssp EEETTCSSHHHHHHHHHHHH---------TTCEEEEEESSTTTTHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHHh
Confidence 33556778888888887743 478999999988877777666644
No 460
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=47.36 E-value=77 Score=22.85 Aligned_cols=41 Identities=17% Similarity=-0.039 Sum_probs=30.1
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++...+...+.+.
T Consensus 7 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 47 (256)
T 1geg_A 7 VTGAGQGIGKAIALRLVK---------DGFAVAIADYNDATAKAVASEIN 47 (256)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456778888888887743 47889999999877666655543
No 461
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=47.00 E-value=59 Score=23.57 Aligned_cols=43 Identities=7% Similarity=-0.086 Sum_probs=32.3
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+..
T Consensus 11 lVTGas~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 53 (250)
T 3nyw_A 11 IITGASQGIGAVIAAGLAT---------DGYRVVLIARSKQNLEKVHDEIMR 53 (250)
T ss_dssp EEESTTSHHHHHHHHHHHH---------HTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHH
Confidence 3556678888888887642 478999999999888877776654
No 462
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=46.72 E-value=68 Score=23.52 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=30.3
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+-.|+|.++.++++++.. .+.+++.+|.+...++...+.+
T Consensus 35 VTGas~GIG~aia~~l~~---------~G~~Vi~~~r~~~~~~~~~~~~ 74 (281)
T 3ppi_A 35 VSGGAGGLGEATVRRLHA---------DGLGVVIADLAAEKGKALADEL 74 (281)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHH---------CCCEEEEEeCChHHHHHHHHHh
Confidence 556778888888887743 4789999999988777666544
No 463
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=46.41 E-value=81 Score=22.82 Aligned_cols=41 Identities=10% Similarity=0.059 Sum_probs=30.1
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 12 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~ 52 (263)
T 3ai3_A 12 ITGSSSGIGLAIAEGFAK---------EGAHIVLVARQVDRLHEAARSLK 52 (263)
T ss_dssp EESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 556778888888887743 47889999999877666555443
No 464
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=46.30 E-value=82 Score=22.87 Aligned_cols=41 Identities=5% Similarity=-0.032 Sum_probs=30.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 18 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 58 (267)
T 1iy8_A 18 ITGGGSGLGRATAVRLAA---------EGAKLSLVDVSSEGLEASKAAVL 58 (267)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456788888888887743 47889999999877766655543
No 465
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.24 E-value=81 Score=23.03 Aligned_cols=42 Identities=7% Similarity=-0.077 Sum_probs=29.2
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC------------hHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN------------RAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s------------~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.+ ...++.....+.
T Consensus 14 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (287)
T 3pxx_A 14 LVTGGARGQGRSHAVKLAE---------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67 (287)
T ss_dssp EEETTTSHHHHHHHHHHHH---------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHH---------CCCeEEEEcccccccccccchhhhHHHHHHHHHHH
Confidence 3556778888888887743 47889999987 555555555444
No 466
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.87 E-value=82 Score=23.00 Aligned_cols=30 Identities=7% Similarity=-0.044 Sum_probs=22.6
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN 43 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s 43 (167)
=+-.|+|.++.++++.+.. .+.+++.+|.+
T Consensus 17 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~ 46 (278)
T 3sx2_A 17 FITGAARGQGRAHAVRLAA---------DGADIIAVDLC 46 (278)
T ss_dssp EEESTTSHHHHHHHHHHHH---------TTCEEEEEECC
T ss_pred EEECCCChHHHHHHHHHHH---------CCCeEEEEecc
Confidence 3556778888888887743 48889999976
No 467
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=45.87 E-value=56 Score=21.35 Aligned_cols=42 Identities=24% Similarity=0.112 Sum_probs=29.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
++|+=+|+ |.++..++..+.. .+.+++.+|.+++..+...+.
T Consensus 22 ~~v~iiG~--G~iG~~~a~~l~~---------~g~~v~v~~r~~~~~~~~a~~ 63 (144)
T 3oj0_A 22 NKILLVGN--GMLASEIAPYFSY---------PQYKVTVAGRNIDHVRAFAEK 63 (144)
T ss_dssp CEEEEECC--SHHHHHHGGGCCT---------TTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHh---------CCCEEEEEcCCHHHHHHHHHH
Confidence 35666775 7788888887642 356688999998776654433
No 468
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=45.49 E-value=85 Score=23.18 Aligned_cols=42 Identities=5% Similarity=0.050 Sum_probs=29.3
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++. ++..++...+.+.
T Consensus 29 lVTGas~GIG~~ia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~ 71 (281)
T 3v2h_A 29 VITGSTSGIGLAIARTLAK---------AGANIVLNGFGAPDEIRTVTDEVA 71 (281)
T ss_dssp EEETCSSHHHHHHHHHHHH---------TTCEEEEECCCCHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCChHHHHHHHHHHh
Confidence 3455778888888887743 4789999998 6666665555544
No 469
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=45.28 E-value=81 Score=23.51 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=30.6
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 38 lVTGas~gIG~aia~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~ 79 (291)
T 3cxt_A 38 LVTGASYGIGFAIASAYAK---------AGATIVFNDINQELVDRGMAAYK 79 (291)
T ss_dssp EEETCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3556788888888887743 47889999998877766555543
No 470
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=44.85 E-value=30 Score=24.05 Aligned_cols=38 Identities=21% Similarity=0.105 Sum_probs=27.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLD 48 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~ 48 (167)
|+||=. .|+|.++.++++.+.. .+.++++++.++....
T Consensus 1 MkvlVt-GatG~iG~~l~~~L~~---------~g~~V~~~~R~~~~~~ 38 (221)
T 3ew7_A 1 MKIGII-GATGRAGSRILEEAKN---------RGHEVTAIVRNAGKIT 38 (221)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHH---------TTCEEEEEESCSHHHH
T ss_pred CeEEEE-cCCchhHHHHHHHHHh---------CCCEEEEEEcCchhhh
Confidence 677755 4678888888887742 4788999998875543
No 471
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=44.81 E-value=18 Score=26.88 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=24.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN 43 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s 43 (167)
|||| +-.|+|.++.++.+.+.. .+.+++++..+
T Consensus 1 MkIL-VTGatGfIG~~L~~~L~~---------~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVL-VGGGTGFIGTALTQLLNA---------RGHEVTLVSRK 33 (298)
T ss_dssp CEEE-EETTTSHHHHHHHHHHHH---------TTCEEEEEESS
T ss_pred CEEE-EECCCCHHHHHHHHHHHH---------CCCEEEEEECC
Confidence 8888 556899999999888742 36677776543
No 472
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=44.81 E-value=12 Score=27.34 Aligned_cols=30 Identities=13% Similarity=0.413 Sum_probs=24.5
Q ss_pred ccccccccCCCCCCCCceeeeeeccccccC
Q psy889 69 FLEANAEELPIESDSYSAYTIAFGIRNIDI 98 (167)
Q Consensus 69 ~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~ 98 (167)
+..+|++.++++++.||.+.+...++.+.+
T Consensus 89 ~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d 118 (260)
T 1vl5_A 89 YVQGDAEQMPFTDERFHIVTCRIAAHHFPN 118 (260)
T ss_dssp EEECCC-CCCSCTTCEEEEEEESCGGGCSC
T ss_pred EEEecHHhCCCCCCCEEEEEEhhhhHhcCC
Confidence 567788888999999999999998877754
No 473
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.69 E-value=88 Score=22.92 Aligned_cols=43 Identities=12% Similarity=0.011 Sum_probs=29.7
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-------------ChHHHHHHHHHHH
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-------------NRAMLDVGEQRAR 55 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-------------s~~~~~~a~~~~~ 55 (167)
.=+-.|+|.++.++++.+.. .+.+++.+|. +++.++...+.+.
T Consensus 18 ~lVTGas~gIG~a~a~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (280)
T 3pgx_A 18 AFITGAARGQGRSHAVRLAA---------EGADIIACDICAPVSASVTYAPASPEDLDETARLVE 73 (280)
T ss_dssp EEEESTTSHHHHHHHHHHHH---------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHH---------CCCEEEEEeccccccccccccccCHHHHHHHHHHHH
Confidence 33556778888888887643 4889999987 5666666555544
No 474
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.51 E-value=20 Score=24.06 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=25.9
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLD 48 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~ 48 (167)
++|+=+|+ |.++..+++.+.. .+.+++++|.++..++
T Consensus 20 ~~v~IiG~--G~iG~~la~~L~~---------~g~~V~vid~~~~~~~ 56 (155)
T 2g1u_A 20 KYIVIFGC--GRLGSLIANLASS---------SGHSVVVVDKNEYAFH 56 (155)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCGGGGG
T ss_pred CcEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHH
Confidence 35666664 7788877776642 3678999999876543
No 475
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=44.30 E-value=67 Score=23.21 Aligned_cols=43 Identities=9% Similarity=-0.118 Sum_probs=29.8
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHH
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRAR 55 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~ 55 (167)
|| +-.|+|.++.++++++.. .+.++++++. ++...+...+.+.
T Consensus 24 vl-ItGasggiG~~la~~l~~---------~G~~v~~~~r~~~~~~~~~~~~l~ 67 (274)
T 1ja9_A 24 AL-TTGAGRGIGRGIAIELGR---------RGASVVVNYGSSSKAAEEVVAELK 67 (274)
T ss_dssp EE-ETTTTSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHH
T ss_pred EE-EeCCCchHHHHHHHHHHH---------CCCEEEEEcCCchHHHHHHHHHHH
Confidence 44 455788899988887743 4778999888 7666665554443
No 476
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=44.09 E-value=88 Score=22.56 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=30.1
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+.
T Consensus 19 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~ 59 (260)
T 2zat_A 19 VTASTDGIGLAIARRLAQ---------DGAHVVVSSRKQENVDRTVATLQ 59 (260)
T ss_dssp ESSCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 456788888888887743 47889999998877666555543
No 477
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=44.09 E-value=33 Score=24.42 Aligned_cols=44 Identities=7% Similarity=0.021 Sum_probs=31.1
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
|++.=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~ 44 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDA---------EGKATYLTGRSESKLSTVTNC 44 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHT
T ss_pred CCEEEEecCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHH
Confidence 45444566778888888887743 478899999998877665543
No 478
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=43.73 E-value=8.5 Score=28.69 Aligned_cols=24 Identities=8% Similarity=0.081 Sum_probs=0.0
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEE
Q psy889 131 NVTRIDKALSEAYRVLKPGGRFLC 154 (167)
Q Consensus 131 ~~~~~~~~l~~~~~~LkpgG~l~~ 154 (167)
+...+...+.+++++|+|||.+++
T Consensus 49 y~~~~~~~l~~~~~~Lk~~g~i~v 72 (260)
T 1g60_A 49 FLAFTYRWIDKVLDKLDKDGSLYI 72 (260)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEE
No 479
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=43.07 E-value=97 Score=23.05 Aligned_cols=30 Identities=7% Similarity=-0.017 Sum_probs=22.2
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN 43 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s 43 (167)
=+-.|+|.++.+++..+.. .+.+++.+|.+
T Consensus 32 lVTGas~GIG~aia~~la~---------~G~~V~~~~~~ 61 (299)
T 3t7c_A 32 FITGAARGQGRSHAITLAR---------EGADIIAIDVC 61 (299)
T ss_dssp EEESTTSHHHHHHHHHHHH---------TTCEEEEEECC
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEecc
Confidence 3455677888888887643 48899999886
No 480
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=42.98 E-value=94 Score=22.59 Aligned_cols=41 Identities=7% Similarity=-0.162 Sum_probs=30.4
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRAR 55 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~ 55 (167)
+-.|+|.++.++++.+.. .+.+++.++. ++..++...+.+.
T Consensus 16 VTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~ 57 (276)
T 1mxh_A 16 ITGGARRIGHSIAVRLHQ---------QGFRVVVHYRHSEGAAQRLVAELN 57 (276)
T ss_dssp ETTCSSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCChHHHHHHHHHHH
Confidence 556778899988887743 4789999998 8777666655553
No 481
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.92 E-value=90 Score=22.86 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=30.8
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+.
T Consensus 10 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~ 51 (280)
T 1xkq_A 10 IITGSSNGIGRTTAILFAQ---------EGANVTITGRSSERLEETRQIIL 51 (280)
T ss_dssp EETTCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3455778888888887643 47899999999877766655543
No 482
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=42.64 E-value=77 Score=23.82 Aligned_cols=43 Identities=12% Similarity=0.044 Sum_probs=32.8
Q ss_pred EEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 3 vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
|.=+-.|++.++++++..+.. .+++++.+|.+++.++.+.+.+
T Consensus 31 valVTGas~GIG~aiA~~la~---------~Ga~V~i~~r~~~~l~~~~~~~ 73 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVA---------EGARVFITGRRKDVLDAAIAEI 73 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCcCCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHc
Confidence 444566777888888887753 5899999999998887776554
No 483
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=42.51 E-value=97 Score=22.61 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=30.2
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
=+-.|+|.++.++++.+.. .+.+++.++.++..++...+.+
T Consensus 25 lVTGas~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l 65 (267)
T 1vl8_A 25 LVTGGSRGLGFGIAQGLAE---------AGCSVVVASRNLEEASEAAQKL 65 (267)
T ss_dssp EEETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHH
Confidence 3556788888888887743 4788999999887766655444
No 484
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=42.49 E-value=12 Score=27.99 Aligned_cols=29 Identities=21% Similarity=0.178 Sum_probs=24.1
Q ss_pred ccccccccCCCCCCCCceeeeeecccccc
Q psy889 69 FLEANAEELPIESDSYSAYTIAFGIRNID 97 (167)
Q Consensus 69 ~~~~d~~~l~~~~~~fd~~~~~~~~~~~~ 97 (167)
+..++++.+++++++||.+++...++.+.
T Consensus 85 ~~~~~~e~~~~~~~sfD~v~~~~~~h~~~ 113 (257)
T 4hg2_A 85 YAVAPAEDTGLPPASVDVAIAAQAMHWFD 113 (257)
T ss_dssp EEECCTTCCCCCSSCEEEEEECSCCTTCC
T ss_pred eehhhhhhhcccCCcccEEEEeeehhHhh
Confidence 45677888999999999999998886654
No 485
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=42.46 E-value=88 Score=22.12 Aligned_cols=40 Identities=5% Similarity=-0.045 Sum_probs=29.8
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+-.|+|.++.++++++.. .+.+++.++.++...+...+.+
T Consensus 12 VtGasggiG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~ 51 (248)
T 2pnf_A 12 VTGSTRGIGRAIAEKLAS---------AGSTVIITGTSGERAKAVAEEI 51 (248)
T ss_dssp ETTCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHHH---------CCCEEEEEeCChHHHHHHHHHH
Confidence 456788899998887743 4788999999887766655444
No 486
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=42.42 E-value=99 Score=22.68 Aligned_cols=31 Identities=10% Similarity=-0.020 Sum_probs=22.8
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCC
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN 43 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s 43 (167)
.=+-.|+|.++.++++.+.. .+.+++.+|.+
T Consensus 14 ~lVTGas~gIG~aia~~la~---------~G~~V~~~~~~ 44 (286)
T 3uve_A 14 AFVTGAARGQGRSHAVRLAQ---------EGADIIAVDIC 44 (286)
T ss_dssp EEEESTTSHHHHHHHHHHHH---------TTCEEEEEECC
T ss_pred EEEeCCCchHHHHHHHHHHH---------CCCeEEEEecc
Confidence 33556677888888887743 48899999886
No 487
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=42.41 E-value=15 Score=28.47 Aligned_cols=17 Identities=24% Similarity=0.139 Sum_probs=13.8
Q ss_pred HHHHhcCCCcEEEEEee
Q psy889 141 EAYRVLKPGGRFLCLEF 157 (167)
Q Consensus 141 ~~~~~LkpgG~l~~~~~ 157 (167)
+..+.|+++|+++.+..
T Consensus 260 ~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 260 GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHTSCTTCEEEECCC
T ss_pred HHHHHhccCCEEEEecC
Confidence 67899999999987543
No 488
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=42.38 E-value=16 Score=27.44 Aligned_cols=39 Identities=15% Similarity=0.056 Sum_probs=28.0
Q ss_pred eEEeeec--CCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+ |.|..+..+++.. +.++++++.+++.++.+++
T Consensus 128 ~vlV~Ga~G~vG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 128 KVLVQAAAGALGTAAVQVARAM------------GLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp EEEESSTTBHHHHHHHHHHHHT------------TCEEEEEESSGGGSHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHh
Confidence 5777775 4455666666554 6799999999888877754
No 489
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=42.00 E-value=96 Score=22.55 Aligned_cols=42 Identities=7% Similarity=-0.048 Sum_probs=31.8
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHHh
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~~ 56 (167)
+-.|+|.++.++++.+.. .+.+++.+|.++..++...+.+..
T Consensus 15 VTGas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~ 56 (267)
T 3t4x_A 15 VTGSTAGIGKAIATSLVA---------EGANVLINGRREENVNETIKEIRA 56 (267)
T ss_dssp ETTCSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHh
Confidence 455678888888887643 488999999998887777666644
No 490
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=41.72 E-value=1e+02 Score=22.76 Aligned_cols=43 Identities=5% Similarity=-0.162 Sum_probs=31.4
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEee-CChHHHHHHHHHHH
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVAD-INRAMLDVGEQRAR 55 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D-~s~~~~~~a~~~~~ 55 (167)
.=+-.|+|.++.++++.+.. .+.+++.++ .++..++...+.+.
T Consensus 12 ~lVTGas~GIG~aia~~la~---------~G~~V~~~~~r~~~~~~~~~~~l~ 55 (291)
T 1e7w_A 12 ALVTGAAKRLGRSIAEGLHA---------EGYAVCLHYHRSAAEANALSATLN 55 (291)
T ss_dssp EEETTCSSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHH---------CCCeEEEEcCCCHHHHHHHHHHHh
Confidence 33556778888888887743 478999999 88877776665553
No 491
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=41.67 E-value=89 Score=22.65 Aligned_cols=41 Identities=5% Similarity=-0.027 Sum_probs=30.7
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+
T Consensus 12 lVTGas~gIG~a~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~ 52 (255)
T 4eso_A 12 IVIGGTHGMGLATVRRLVE---------GGAEVLLTGRNESNIARIREEF 52 (255)
T ss_dssp EEETCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHh
Confidence 3556778888888887743 4889999999988777666544
No 492
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=41.44 E-value=98 Score=23.06 Aligned_cols=42 Identities=17% Similarity=0.051 Sum_probs=31.1
Q ss_pred eeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHHH
Q psy889 5 FYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (167)
Q Consensus 5 D~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~~ 55 (167)
=+-.|+|.++.++++.+.. .+.+++.++.+++.++...+.+.
T Consensus 30 lVTGas~gIG~aia~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~ 71 (297)
T 1xhl_A 30 IITGSSNGIGRSAAVIFAK---------EGAQVTITGRNEDRLEETKQQIL 71 (297)
T ss_dssp EETTCSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 3556788888888887743 47899999999887766655553
No 493
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=41.36 E-value=34 Score=26.77 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=27.2
Q ss_pred eEEeeecC-CCchHHHHHHhhccCCCCCCCCCCC-CcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~a~~ 52 (167)
+||-.|+| .|..+..+++.. + .++++++.+++-++.+++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~------------Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSL------------GAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TBSEEEEEESCHHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHc------------CCceEEEEcCCHHHHHHHHH
Confidence 57777743 345555555544 6 589999999988887763
No 494
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=41.16 E-value=91 Score=22.11 Aligned_cols=40 Identities=8% Similarity=-0.008 Sum_probs=29.0
Q ss_pred eecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHHH
Q psy889 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA 54 (167)
Q Consensus 6 ~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~~ 54 (167)
+-.|+|.++.++++++.. .+.+++.++.++..++...+.+
T Consensus 7 ItGasggiG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~ 46 (250)
T 2cfc_A 7 VTGASSGNGLAIATRFLA---------RGDRVAALDLSAETLEETARTH 46 (250)
T ss_dssp EETTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHH
T ss_pred EeCCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHH
Confidence 445778888888887743 4788999999887666555443
No 495
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=41.15 E-value=15 Score=27.36 Aligned_cols=31 Identities=16% Similarity=0.027 Sum_probs=26.0
Q ss_pred cccccccccCCCCCCCCceeeeeeccccccC
Q psy889 68 RFLEANAEELPIESDSYSAYTIAFGIRNIDI 98 (167)
Q Consensus 68 ~~~~~d~~~l~~~~~~fd~~~~~~~~~~~~~ 98 (167)
++..+|+..+|++.+.||.+.+...+.++.+
T Consensus 135 ~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 165 (297)
T 2o57_A 135 TVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD 165 (297)
T ss_dssp EEEECCTTSCSSCTTCEEEEEEESCGGGCSC
T ss_pred EEEEcCcccCCCCCCCEeEEEecchhhhcCC
Confidence 4677888889999999999999988877654
No 496
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=41.14 E-value=1.1e+02 Score=22.63 Aligned_cols=44 Identities=5% Similarity=-0.065 Sum_probs=30.3
Q ss_pred EeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeC-ChHHHHHHHHHHHh
Q psy889 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARD 56 (167)
Q Consensus 4 LD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~a~~~~~~ 56 (167)
.=+-.|+|.++.++++.+.. .+.+++.++. +++.++...+.+..
T Consensus 32 ~lVTGas~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~~~~ 76 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAA---------SGFDIAITGIGDAEGVAPVIAELSG 76 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHH---------TTCEEEEEESCCHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHHHH---------CCCeEEEEeCCCHHHHHHHHHHHHh
Confidence 33556778888888887643 4788999985 66666666555543
No 497
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=41.07 E-value=19 Score=27.54 Aligned_cols=33 Identities=9% Similarity=-0.146 Sum_probs=24.1
Q ss_pred eEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCCh
Q psy889 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR 44 (167)
Q Consensus 2 ~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~ 44 (167)
+||=. .|+|.++..+++.+.. .+.++++++.++
T Consensus 12 ~IlVt-GatG~iG~~l~~~L~~---------~g~~V~~l~R~~ 44 (346)
T 3i6i_A 12 RVLIA-GATGFIGQFVATASLD---------AHRPTYILARPG 44 (346)
T ss_dssp CEEEE-CTTSHHHHHHHHHHHH---------TTCCEEEEECSS
T ss_pred eEEEE-CCCcHHHHHHHHHHHH---------CCCCEEEEECCC
Confidence 55544 5689999999887742 367788888765
No 498
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=40.74 E-value=85 Score=22.60 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=29.1
Q ss_pred eEEeeecC-CCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHHH
Q psy889 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (167)
Q Consensus 2 ~vLD~g~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~~ 53 (167)
+||=.|++ +|.++.++++.+.. .+.+++.++.+....+..++.
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~ 59 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKR---------EGAELAFTYVGDRFKDRITEF 59 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHH
T ss_pred EEEEeCCCCCCcHHHHHHHHHHH---------cCCCEEEEecchhhHHHHHHH
Confidence 45555553 37888888887643 478899999886655555443
No 499
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=40.56 E-value=35 Score=26.15 Aligned_cols=41 Identities=5% Similarity=-0.056 Sum_probs=28.5
Q ss_pred eEEeeecCC-CchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHHHHHH
Q psy889 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (167)
Q Consensus 2 ~vLD~g~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~a~~ 52 (167)
+||-+|+|. |..+..+++... ++.+++++|.+++-.+.+++
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~----------~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALM----------KNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC----------TTCEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhc----------CCCEEEEEeCCHHHHHHHHH
Confidence 678888743 455555555441 15789999999988888865
No 500
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=40.20 E-value=45 Score=23.28 Aligned_cols=38 Identities=11% Similarity=-0.031 Sum_probs=28.4
Q ss_pred CeEEeeecCCCchHHHHHHhhccCCCCCCCCCCCCcEEEeeCChHHHH
Q psy889 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLD 48 (167)
Q Consensus 1 ~~vLD~g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~ 48 (167)
|+||=.| |+|.++..+++.+.. .+.++++++.++....
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~---------~g~~V~~~~R~~~~~~ 38 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARR---------RGHEVLAVVRDPQKAA 38 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHH
T ss_pred CEEEEEc-CCCHHHHHHHHHHHH---------CCCEEEEEEecccccc
Confidence 6777554 688899998887742 4788999998876543
Done!