BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8891
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C0J2|A16L1_MOUSE Autophagy-related protein 16-1 OS=Mus musculus GN=Atg16l1 PE=1 SV=1
Length = 607
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 111/206 (53%), Gaps = 44/206 (21%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+
Sbjct: 469 KKIRFWDIRSESVVREMELLGKITALDLNP-ERTELLSCSRDDLL--------------- 512
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
K+ L + K F A GFK D+TR VF D YVA
Sbjct: 513 ---------------------KVIDLRTNAVKQTFS-APGFKCGSDWTRVVFSPDGSYVA 550
Query: 178 VGSIDGNIYVWDCNTEQVEAVLKDMH 203
GS +G++YVW T +VE VL H
Sbjct: 551 AGSAEGSLYVWSVLTGKVEKVLSKQH 576
>sp|Q676U5|A16L1_HUMAN Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2
Length = 607
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 108/206 (52%), Gaps = 44/206 (21%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+ T I F
Sbjct: 469 KKIRFWDIRSESIVREMELLGKITALDLNP-ERTELLSCSRDDLLKVIDLRTNAIKQTFS 527
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
A GFK D+TR VF D YVA
Sbjct: 528 -------------------------------------APGFKCGSDWTRVVFSPDGSYVA 550
Query: 178 VGSIDGNIYVWDCNTEQVEAVLKDMH 203
GS +G++Y+W T +VE VL H
Sbjct: 551 AGSAEGSLYIWSVLTGKVEKVLSKQH 576
>sp|Q5RAC9|A16L1_PONAB Autophagy-related protein 16-1 OS=Pongo abelii GN=ATG16L1 PE=2 SV=1
Length = 607
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 106/206 (51%), Gaps = 44/206 (21%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKHWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+ T I F
Sbjct: 469 KKIRFWDIRSESIVREMELLGKITALDLNP-ERTELLSCSRDDLLKVIDLRTNAIKQTFS 527
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
A GFK D+TR VF D YVA
Sbjct: 528 -------------------------------------APGFKCGSDWTRVVFSPDGSYVA 550
Query: 178 VGSIDGNIYVWDCNTEQVEAVLKDMH 203
GS +G++Y W T +VE VL H
Sbjct: 551 AGSAEGSLYTWSVLTGKVEKVLSKQH 576
>sp|Q5I0B9|ATG16_XENTR Autophagy-related protein 16 OS=Xenopus tropicalis GN=atg16 PE=2
SV=2
Length = 622
Score = 129 bits (324), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 44/206 (21%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 427 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFD 483
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
KK+RFWD R E VR++EL G+IT+LDL+ T+ S +DL+
Sbjct: 484 KKIRFWDIRTECIVRELELQGRITALDLNP-ERTQLLSCSRDDLI--------------- 527
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
KIT L + + F A GFK D+TR +F D YV+
Sbjct: 528 ---------------------KITDLRANAVQQTFS-APGFKCGSDWTRVIFSPDGSYVS 565
Query: 178 VGSIDGNIYVWDCNTEQVEAVLKDMH 203
GS +G +Y W+ T +VE + H
Sbjct: 566 AGSAEGTLYFWNVLTGKVERMFSKQH 591
>sp|Q6KAU8|A16L2_MOUSE Autophagy-related protein 16-2 OS=Mus musculus GN=Atg16l2 PE=2 SV=2
Length = 623
Score = 94.4 bits (233), Expect = 5e-19, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 44/204 (21%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
AKF + V+GS DRT+K WDL + T S CND+V D IISGH D+K
Sbjct: 432 AKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGD---HIIISGHNDQK 488
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 119
+RFWD R ++ I + G++TSL LS YD ++S D
Sbjct: 489 IRFWDSRGPHCIQVIPVQGRVTSLHLS-----------------YD--QLHLLSCSRDNT 529
Query: 120 VRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVG 179
++ D R +R + A+GFK D+T+AVF D Y G
Sbjct: 530 LKVIDLRI-SNIRQV------------------FRADGFKCSSDWTKAVFSPDRSYALAG 570
Query: 180 SIDGNIYVWDCNTEQVEAVLKDMH 203
S +G++Y+WD NT ++E L+ H
Sbjct: 571 SSNGDLYIWDVNTGKLETSLQGPH 594
>sp|Q8NAA4|A16L2_HUMAN Autophagy-related protein 16-2 OS=Homo sapiens GN=ATG16L2 PE=2 SV=2
Length = 619
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 93/204 (45%), Gaps = 44/204 (21%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
AKF + V+GS DRT+K WDL + T S CND+V D IISGH D+K
Sbjct: 428 AKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGD---HIIISGHNDQK 484
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 119
+RFWD R + I + G++TSL LS + S N L
Sbjct: 485 IRFWDSRGPHCTQVIPVQGRVTSLSLSHDQLHLLSCSRDNTL------------------ 526
Query: 120 VRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVG 179
K+ L +S + F A+GFK D+T+AVF D Y G
Sbjct: 527 -------------------KVIDLRVSNIRQVFR-ADGFKCGSDWTKAVFSPDRSYALAG 566
Query: 180 SIDGNIYVWDCNTEQVEAVLKDMH 203
S DG +Y+WD +T ++E+ L+ H
Sbjct: 567 SCDGALYIWDVDTGKLESRLQGPH 590
Score = 33.9 bits (76), Expect = 0.79, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCN--DLVTYDGAGTTIISGHFDK 58
A F D + ++GSCD L IWD+ + E++ G C + V + +G+ ++S +
Sbjct: 554 AVFSPDRSYALAGSCDGALYIWDVDTGKLESRLQGPHCAAVNAVAWCYSGSHMVSVDQGR 613
Query: 59 KVRFW 63
KV W
Sbjct: 614 KVVLW 618
>sp|Q09406|A16L2_CAEEL Autophagic-related protein 16.2 OS=Caenorhabditis elegans
GN=atg-16.2 PE=3 SV=2
Length = 534
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 42/193 (21%)
Query: 12 VVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDG-AGTTIISGHFDKKVRFWDFRA 67
V+SGS DRT+K WD+ R ++ GS+ D+V G + ++ IS HFDKKVRFWD R+
Sbjct: 346 VISGSADRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARS 405
Query: 68 EEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 127
+ +EL K++SLD+S G +++ D + D R
Sbjct: 406 SDATYSVELGQKVSSLDISMD-------------------GLQVLASSRDDTLSLIDVR- 445
Query: 128 EEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYV 187
+ G + AE +K CD TRA+F +YV GS + ++++
Sbjct: 446 ------------------NYGIIHLYSAEQYKTSCDSTRAIFSSTGEYVLAGSSNSSVFI 487
Query: 188 WDCNTEQVEAVLK 200
W+ T ++E V+K
Sbjct: 488 WNTKTTKLEKVVK 500
>sp|Q19124|A16L1_CAEEL Autophagic-related protein 16.1 OS=Caenorhabditis elegans
GN=atg-16.1 PE=3 SV=1
Length = 578
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 43/202 (21%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTII-SGHFD 57
C KF + VSGS DR +KIWD+ R + + F S D+ T GA ++ SGHFD
Sbjct: 383 CVKFYQSHS-AVSGSADRVIKIWDIQNQRCSRSLFPASKVLDVATNMGASPSLFASGHFD 441
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
KK+RF+D R+ + VR +++ G+ITSLD++ S C LV+ D
Sbjct: 442 KKLRFYDGRSTDPVRTVDMGGRITSLDVTM--------SGCELLVSTR-----------D 482
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
+ D R + V + AE ++ D +R V ++YVA
Sbjct: 483 DTISLIDLRTFQTV-------------------HCYSAENYRTSSDLSRVVLSSGNEYVA 523
Query: 178 VGSIDGNIYVWDCNTEQVEAVL 199
GS +G+I+VW+ N+ ++E L
Sbjct: 524 AGSSNGSIFVWNRNSTKLEKQL 545
>sp|O15736|TIPD_DICDI Protein tipD OS=Dictyostelium discoideum GN=tipD PE=3 SV=1
Length = 612
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 102/253 (40%), Gaps = 51/253 (20%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK---FAGSSCNDLVTYDGAGTTIISGHFDK 58
C F + +G D+ +K+WD+ S + K S V++ +I+ D
Sbjct: 329 CMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDN 388
Query: 59 KVRFWDFRAEEKVRDIELH-GKITS--------------------LDLSKG--TETKFAG 95
R W+ + H GK+ + DL KG T T F
Sbjct: 389 SARLWNTELGRSRHTLTGHIGKVYTGKFINSNRVVTGSHDRTIKLWDLQKGYCTRTIFCF 448
Query: 96 SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIE-LH-GKITSLDLSKGKYYFV 153
SSCNDLV G+GT + SGH D VRFWD A E + + +H G+ITS+ S +
Sbjct: 449 SSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQI 508
Query: 154 FAEG-----------------------FKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDC 190
++ ++T+A + D Y+A GSIDG+I +WD
Sbjct: 509 LTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIWDA 568
Query: 191 NTEQVEAVLKDMH 203
+ VL +H
Sbjct: 569 TNGKTVKVLTKVH 581
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 77/202 (38%), Gaps = 45/202 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCN-DLVTYDGAGTTIISGHFDKKV 60
KF D + + SGS DRT+ +WD + AG SC V ++ G + + D +
Sbjct: 47 KFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSL 106
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDG-AGTTIISGHFDKK 119
+ WD +R + H T F CN +DG AG + SG FD+
Sbjct: 107 KLWDAETGACLRTLTGH-----------TNYVFC---CN----FDGAAGHLLASGSFDET 148
Query: 120 VRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVG 179
+R WD R+ +R++ H T A F D V
Sbjct: 149 LRLWDVRSGRCLREVPAHSD-----------------------PVTSAAFSYDGSMVVTS 185
Query: 180 SIDGNIYVWDCNTEQVEAVLKD 201
S+DG I +WD T L D
Sbjct: 186 SLDGLIRLWDTQTGHCLKTLFD 207
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 46/177 (25%)
Query: 18 DRTLKIWDLRSTETKFAGSSCNDLV---TYDGA-GTTIISGHFDKKVRFWDFRAEEKVRD 73
D +LK+WD + + + V +DGA G + SG FD+ +R WD R+ +R+
Sbjct: 103 DHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLRE 162
Query: 74 IELHG-KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVR 132
+ H +TS S YD G+ +++ D +R WD + ++
Sbjct: 163 VPAHSDPVTSAAFS-----------------YD--GSMVVTSSLDGLIRLWDTQTGHCLK 203
Query: 133 DIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWD 189
T D F A F + YV ++DG +WD
Sbjct: 204 --------TLFDRDSPPVSF--------------AAFTPNAKYVLCNTLDGRAKLWD 238
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 11 KVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY---DGAGTTIISGHFDKKVRFWDFRA 67
K+VSGS DRT++IWDLR+ + S + + T G G I +G D+ VR W
Sbjct: 499 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW---- 554
Query: 68 EEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 127
D E + LD + T S + + T D G +++SG D+ V+ W+ +
Sbjct: 555 -----DSETGFLVERLDSENESGTGHKDSVYSVVFTRD--GQSVVSGSLDRSVKLWNLQN 607
Query: 128 EEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYV 187
D + T G FV + +D+Y+ GS D +
Sbjct: 608 ANNKSDSKTPNSGTCEVTYIGHKDFVLS-----------VATTQNDEYILSGSKDRGVLF 656
Query: 188 WD 189
WD
Sbjct: 657 WD 658
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 43/152 (28%)
Query: 42 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCND 100
V + G + +G D+ +R WD + V ++ H + I SLD
Sbjct: 449 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLD---------------- 492
Query: 101 LVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKV 160
Y +G ++SG D+ VR WD R + + + +T++ +S G
Sbjct: 493 ---YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG------------ 537
Query: 161 QCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D Y+A GS+D + VWD T
Sbjct: 538 -----------DGKYIAAGSLDRAVRVWDSET 558
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 29/138 (21%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCND---LVTYDG-------AGTT---- 50
F D VVSGS DR++K+W+L++ K + N VTY G TT
Sbjct: 584 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 643
Query: 51 -IISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAG 108
I+SG D+ V FWD ++ + ++ H + S+ ++ G+ G N T G
Sbjct: 644 YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPL---GPEYNVFATGSG-- 698
Query: 109 TTIISGHFDKKVRFWDFR 126
D K R W ++
Sbjct: 699 --------DCKARIWKYK 708
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F + VVSGS D +++IWD+R+ +T A S V+++ G+ I SG +D
Sbjct: 168 CCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDG 227
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
VR WD + V+ +L + F V + G I+S + D
Sbjct: 228 LVRIWDTANGQCVK---------TLVDDENPPVAF--------VKFSPNGKYILSSNLDN 270
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
++ WDF + ++ + H + Y +FA +F+ V ++
Sbjct: 271 TLKLWDFGKGKTLKQYQGH---------ENNKYCIFA-------NFS----VTGGKWIIS 310
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
GS D IYVW+ T++V L+
Sbjct: 311 GSEDCKIYVWNLQTKEVVQSLE 332
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 52/204 (25%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLR--STETKFAGSS--CNDLVTYDGAGTTIISGHFD 57
C KFLG + S D+T+KIW++ S E G ND + +I++ D
Sbjct: 90 CGKFLG------TSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA-WSADSKSIVTASDD 142
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
K ++ ++ + + ++ H T F CN ++ + ++SG FD
Sbjct: 143 KTLKIYEVPTVKMAKTLKGH-----------TNYVFC---CN----FNPQSSLVVSGSFD 184
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVA 177
+ VR WD R V+ + H S F R D +
Sbjct: 185 ESVRIWDVRTGMCVKTLPAHSDPVS------------------AVSFNR-----DGSLIT 221
Query: 178 VGSIDGNIYVWDCNTEQVEAVLKD 201
GS DG + +WD Q L D
Sbjct: 222 SGSYDGLVRIWDTANGQCVKTLVD 245
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDG----AGTTIISGHFD 57
KF + ++S + D TLK+WD +T ++ G N + G IISG D
Sbjct: 255 KFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSED 314
Query: 58 KKVRFWDFRAEEKVRDIELH 77
K+ W+ + +E V+ +E H
Sbjct: 315 CKIYVWNLQTKEVVQSLEGH 334
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 46/220 (20%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVRFWD 64
D +++VS S D+TLK+WD+RS + +D V ++ I+SG FD+ V+ W+
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 124
+ + ++ + H S V ++ G+ I+SG +D R WD
Sbjct: 152 VKTGKCLKTLSAHSDPIS------------------AVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 125 FRAEEKVRDI--ELHGKITSLDLSKGKYYFVFA---EGFKVQCDFTR------------- 166
+ + +R + E + ++ + S Y + A K+ D++R
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW-DYSRGRCLKTYTGHKNE 252
Query: 167 -----AVF-VVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
A F V +V GS D +Y+W+ T+++ L+
Sbjct: 253 KYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQ 292
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 38/216 (17%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSC-NDLVTYDGA--GTTIISGHFDKKVR 61
F D +V+G+ DR +K+WDL + + ++ S D+ + D + G I+SG D+ R
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTI---------- 111
WD + + +E+ +T++ +S + GS + + +GT +
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESV 487
Query: 112 ------------ISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFK 159
+SG DK ++ W+ +A S+ LS K + +
Sbjct: 488 YSIAFSPDSSILLSGSLDKTIKVWELQATR------------SVGLSAIKPEGICKATYT 535
Query: 160 VQCDFTRAVFVVDDDYVAV-GSIDGNIYVWDCNTEQ 194
DF +V V D + GS D ++ WD T Q
Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQ 571
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 56/206 (27%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKF-----AGSSCNDL----VTYDGAGTTII 52
C KF + + +G C++ ++D+++ + F + DL + + G ++
Sbjct: 318 CVKFSNNGKYLATG-CNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLV 376
Query: 53 SGHFDKKVRFWDFRAEEKVRDI-ELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTT 110
+G D++++ WD + +KVR + H + I SLD S G
Sbjct: 377 TGTEDRQIKLWDL-STQKVRYVFSGHEQDIYSLDFSHN-------------------GRF 416
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFV 170
I+SG D+ R WD + + +E+ +T++ +S
Sbjct: 417 IVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISP----------------------- 453
Query: 171 VDDDYVAVGSIDGNIYVWDCNTEQVE 196
+D ++AVGS+D I VW + VE
Sbjct: 454 -NDQFIAVGSLDQIIRVWSVSGTLVE 478
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAG--SSCNDLVTYDGAGTT----IISG 54
+C ++ D TKV SG CD LK++D+ S +T+ G S+ ++ + G + I++G
Sbjct: 84 LCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTG 143
Query: 55 HFDKKVRFWDFRAEEKVRDIELHGKITSLD 84
+DK +++WD R + V + + ++ S+D
Sbjct: 144 SWDKTIKYWDMRQPQPVSTVMMPERVYSMD 173
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 14 SGSCDRTLKIWDLRST----ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
+ S D ++IWD+++ + SS + GT + SG D ++ +D A
Sbjct: 54 ASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDI-ASG 112
Query: 70 KVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+ + I +H + + + + + + C I++G +DK +++WD R +
Sbjct: 113 QTQQIGMHS--APIKVLRFVQCGPSNTEC------------IVTGSWDKTIKYWDMRQPQ 158
Query: 130 KVRDIELHGKITSLDLSKGKYYFVFAE 156
V + + ++ S+D + AE
Sbjct: 159 PVSTVMMPERVYSMDNKQSLLVVATAE 185
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVRFWD 64
D +++VS S D+TLK+WD+RS + +D V ++ I+SG FD+ V+ W+
Sbjct: 92 DSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 124
+ + ++ + H S V + G+ I+SG +D R WD
Sbjct: 152 VKTGKCLKTLSAHSDPIS------------------AVHFHCNGSLIVSGSYDGLCRIWD 193
Query: 125 FRAEEKVRDI--ELHGKITSLDLSK-GKYYFVFAEGFKVQC-DFTRA------------- 167
+ + +R + E + ++ + S GKY ++ D++R
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEK 253
Query: 168 --VF----VVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
+F V +V GS D +Y+W+ T+++ L+
Sbjct: 254 YCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQ 292
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 11 KVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY----DGAGTTIISGHFDKKVRFWDFR 66
K+VSGS DRT++IWDL +T T S D VT G G I +G D+ VR W
Sbjct: 462 KLVSGSGDRTVRIWDL-TTGTCSLTLSIEDGVTTVAVSPGEGKFIAAGSLDRTVRVW--- 517
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
D + + LD T S + + T DG G ++SG D+ V+ W+
Sbjct: 518 ------DSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKG--VVSGSLDRSVKLWNLN 569
Query: 127 AEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVV-DDDYVAVGSIDGNI 185
L G+ + + V G K DF +V +D+Y+ GS D +
Sbjct: 570 G--------LSGQKSHAECE------VTYTGHK---DFVLSVATTQNDEYILSGSKDRGV 612
Query: 186 YVWDCNT 192
WD +
Sbjct: 613 LFWDTKS 619
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDLVTYD--GAGTTIISGHFDKKV 60
F D + +G+ D+ ++IWDL + + G D+ + D +G ++SG D+ V
Sbjct: 414 FSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHE-QDIYSLDYFPSGNKLVSGSGDRTV 472
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 120
R WD + + +T++ +S G E KF I +G D+ V
Sbjct: 473 RIWDLTTGTCSLTLSIEDGVTTVAVSPG-EGKF-----------------IAAGSLDRTV 514
Query: 121 RFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGS 180
R WD V ++ + +L G V++ VF D V GS
Sbjct: 515 RVWDSDTGFLVERLD-----SENELGTGHRDSVYS-----------VVFTRDGKGVVSGS 558
Query: 181 IDGNIYVWDCN 191
+D ++ +W+ N
Sbjct: 559 LDRSVKLWNLN 569
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 47/173 (27%)
Query: 25 DLRSTETKFAGSSCNDL----VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK- 79
D + A ++ +DL V + G + +G DK +R WD ++ V ++ H +
Sbjct: 391 DGTGNQNSAASTASSDLYIRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQD 450
Query: 80 ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK 139
I SLD Y +G ++SG D+ VR WD + +
Sbjct: 451 IYSLD-------------------YFPSGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDG 491
Query: 140 ITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
+T++ +S G EG ++A GS+D + VWD +T
Sbjct: 492 VTTVAVSPG-------EG----------------KFIAAGSLDRTVRVWDSDT 521
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDG-------AGTT-----II 52
F D VVSGS DR++K+W+L + + + C VTY G TT I+
Sbjct: 547 FTRDGKGVVSGSLDRSVKLWNLNGLSGQKSHAECE--VTYTGHKDFVLSVATTQNDEYIL 604
Query: 53 SGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKG 88
SG D+ V FWD ++ + ++ H + S+ ++ G
Sbjct: 605 SGSKDRGVLFWDTKSGNPLLMLQGHRNSVISVTVANG 641
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 41/192 (21%)
Query: 9 PTKVVSGSCDRTLKIWDLR--STETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
P V +GS D T+K+WD+R + F + VT++ IISG D ++ WD R
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 67 AEEKVRDIELHG-KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
+ + H +T L LS G+ ++S D VR WD
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSS-------------------EGSYLLSNAMDNTVRVWDV 265
Query: 126 RA-EEKVRDIEL-HGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
R K R +++ G + + + + R + D +A GS D
Sbjct: 266 RPFAPKERCVKIFQGNVHNFEK-----------------NLLRCSWSPDGSKIAAGSADR 308
Query: 184 NIYVWDCNTEQV 195
+YVWD + +V
Sbjct: 309 FVYVWDTTSRRV 320
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 60/227 (26%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET--KFAGSS-----CNDLVTYDGAGTTIISGHFDKKV 60
D +++VS S D+TLK+WD+RS + G S CN ++ IISG FD+ V
Sbjct: 94 DSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCN----FNPPSNLIISGSFDETV 149
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 120
+ W+ + + ++ + H S V ++ +G+ I+SG +D
Sbjct: 150 KIWEVKTGKCLKTLSAHSDPVS------------------AVHFNCSGSLIVSGSYDGLC 191
Query: 121 RFWDFRAEEKVRDI-----------------------ELHGKITSLDLSKGKYYFVFA-- 155
R WD + + ++ + L + D S+G+ +
Sbjct: 192 RIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 251
Query: 156 --EGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
E + + +F+ V ++ GS D +Y+W+ T+++ L+
Sbjct: 252 KNEKYCIFANFS----VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 294
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 31/167 (18%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F ++SGS D T+KIW++++ +T A S V ++ +G+ I+SG +D
Sbjct: 130 CCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG 189
Query: 59 KVRFWDFRAEEKVRDI-------------ELHGKITSLDLSKGTETKFAGSSCNDLVTYD 105
R WD + + ++ + +GK T + S L TY
Sbjct: 190 LCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
Query: 106 G---------------AGTTIISGHFDKKVRFWDFRAEEKVRDIELH 137
G G I+SG D V W+ + +E V+ ++ H
Sbjct: 250 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 296
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 46/202 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIW---DLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 60
KF + + S S DR + IW D + T + + V + + ++S DK +
Sbjct: 48 KFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTL 107
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 120
+ WD R+ + ++ ++ H CN ++ IISG FD+ V
Sbjct: 108 KLWDMRSGKCLKTLKGHSNYVFC--------------CN----FNPPSNLIISGSFDETV 149
Query: 121 RFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVDDDYVAVG 179
+ W+ + + ++ + H D AV F + G
Sbjct: 150 KIWEVKTGKCLKTLSAHS------------------------DPVSAVHFNCSGSLIVSG 185
Query: 180 SIDGNIYVWDCNTEQVEAVLKD 201
S DG +WD + Q L D
Sbjct: 186 SYDGLCRIWDAASGQCLKTLVD 207
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 24/109 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDG---------------AG 48
KF + +++ + D TLK+WD ++ C L TY G G
Sbjct: 217 KFSPNGKYILTATLDNTLKLWD-------YSRGRC--LKTYTGHKNEKYCIFANFSVTGG 267
Query: 49 TTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSS 97
I+SG D V W+ + +E V+ ++ H + TE A ++
Sbjct: 268 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAA 316
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 9 PTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
P V +GS D T+K+WD+R F + VT++ IISG D ++ WD R
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 67 AEEKVRDIELHG-KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
+ + H +T L LS G+ ++S D VR WD
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSS-------------------EGSYLLSNAMDNTVRVWDV 264
Query: 126 RA-EEKVRDIEL-HGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
R K R +++ G + + + + R + D +A GS D
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEK-----------------NLLRCSWSPDGSKIAAGSADR 307
Query: 184 NIYVWDCNTEQV 195
+YVWD + ++
Sbjct: 308 FVYVWDTTSRRI 319
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 41/192 (21%)
Query: 9 PTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
P V +GS D T+K+WD+R F + VT++ IISG D ++ WD R
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 67 AEEKVRDIELHG-KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
+ + H +T L LS G+ ++S D VR WD
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSS-------------------EGSYLLSNAMDNTVRVWDV 265
Query: 126 RA-EEKVRDIEL-HGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
R K R + + G + + + + R + D +A GS D
Sbjct: 266 RPFAPKERCVRIFQGNVHNFEK-----------------NLLRCSWSPDGSKIAAGSADR 308
Query: 184 NIYVWDCNTEQV 195
+YVWD + ++
Sbjct: 309 FVYVWDTTSRRI 320
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 60/227 (26%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET--KFAGSS-----CNDLVTYDGAGTTIISGHFDKKV 60
D +++VS S D+TLK+WD+RS + G S CN ++ IISG FD+ V
Sbjct: 94 DSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCN----FNPPSNLIISGSFDETV 149
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 120
+ W+ + + ++ + H S V ++ +G+ I+SG +D
Sbjct: 150 KIWEVKTGKCLKTLSAHSDPVS------------------AVHFNCSGSLIVSGSYDGLC 191
Query: 121 RFWDFRAEEKVRDI-----------------------ELHGKITSLDLSKGKYYFVFA-- 155
R WD + + ++ + L + D S+G+ +
Sbjct: 192 RIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 251
Query: 156 --EGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
E + + +F+ V ++ GS D +Y+W+ T+++ L+
Sbjct: 252 KNEKYCIFANFS----VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 294
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 31/167 (18%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F ++SGS D T+KIW++++ +T A S V ++ +G+ I+SG +D
Sbjct: 130 CCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG 189
Query: 59 KVRFWDFRAEEKVRDI-------------ELHGKITSLDLSKGTETKFAGSSCNDLVTYD 105
R WD + + ++ + +GK T + S L TY
Sbjct: 190 LCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
Query: 106 G---------------AGTTIISGHFDKKVRFWDFRAEEKVRDIELH 137
G G I+SG D V W+ + +E V+ ++ H
Sbjct: 250 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 296
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 46/202 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIW---DLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 60
KF + + S S DR + IW D + +T + + V + + ++S DK +
Sbjct: 48 KFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTL 107
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 120
+ WD R+ + ++ ++ H CN ++ IISG FD+ V
Sbjct: 108 KLWDVRSGKCLKTLKGHSNYVFC--------------CN----FNPPSNLIISGSFDETV 149
Query: 121 RFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVDDDYVAVG 179
+ W+ + + ++ + H D AV F + G
Sbjct: 150 KIWEVKTGKCLKTLSAHS------------------------DPVSAVHFNCSGSLIVSG 185
Query: 180 SIDGNIYVWDCNTEQVEAVLKD 201
S DG +WD + Q L D
Sbjct: 186 SYDGLCRIWDAASGQCLKTLVD 207
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 24/109 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDG---------------AG 48
KF + +++ + D TLK+WD ++ C L TY G G
Sbjct: 217 KFSPNGKYILTATLDNTLKLWD-------YSRGRC--LKTYTGHKNEKYCIFANFSVTGG 267
Query: 49 TTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSS 97
I+SG D V W+ + +E V+ ++ H + TE A ++
Sbjct: 268 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAA 316
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 43/226 (19%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDL--RSTETKFAGSSCNDLVTYDGA--GTTIISGHFDKKV 60
F D + +G+ D+ +++WD+ R+ F G D+ + D + G TI SG D+ V
Sbjct: 352 FSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHE-QDIYSLDFSRDGRTIASGSGDRTV 410
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDL------------------- 101
R WD + + + +T++ +S + AGS +
Sbjct: 411 RLWDIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGH 470
Query: 102 ------VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFA 155
V + G ++SG DK ++ W+ A I S KG
Sbjct: 471 KDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPR---------GIPSSAPPKGGRCIKTF 521
Query: 156 EGFKVQCDFTRAV-FVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
EG + DF +V D +V GS D + WD T + +L+
Sbjct: 522 EGHR---DFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQ 564
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 40/202 (19%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F + VVSGS D +++IWD+++ +T A S V+++ G+ I SG +D
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
VR WD + ++ +L + F V + G I++ + D
Sbjct: 236 LVRIWDTANGQCIK---------TLVDDENPPVAF--------VKFSPNGKYILASNLDS 278
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
++ WDF + ++ H + Y +FA +F+ V ++
Sbjct: 279 TLKLWDFSKGKTLKQYTGH---------ENSKYCIFA-------NFS----VTGGKWIIS 318
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
GS D IY+W+ T ++ L+
Sbjct: 319 GSEDCKIYIWNLQTREIVQCLE 340
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 54/205 (26%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRST--ETKFAGSS--CNDLVTYDGAGTTIISGHFD 57
C K+LG + S D+T+KIW++ E G ND + + ++S D
Sbjct: 98 CGKYLG------TSSADKTVKIWNMDHMICERTLTGHKLGVND-IAWSSDSRCVVSASDD 150
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFD 117
K ++ ++ + ++ H CN ++ + ++SG FD
Sbjct: 151 KTLKIFEIVTSRMTKTLKGHNNYVFC--------------CN----FNPQSSLVVSGSFD 192
Query: 118 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVDDDYV 176
+ VR WD + ++ + H D AV F D +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHS------------------------DPVSAVSFNRDGSLI 228
Query: 177 AVGSIDGNIYVWDCNTEQVEAVLKD 201
A GS DG + +WD Q L D
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVD 253
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDG----AGTTIISGHFD 57
KF + +++ + D TLK+WD +T ++ G + + G IISG D
Sbjct: 263 KFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSED 322
Query: 58 KKVRFWDFRAEEKVRDIELH 77
K+ W+ + E V+ +E H
Sbjct: 323 CKIYIWNLQTREIVQCLEGH 342
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ F D +V SGS D+T+KIWD S T+T V + G + SG D
Sbjct: 971 LSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDD 1030
Query: 58 KKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD---GAGTTIIS 113
K ++ WD + + +E HG + S+ S + +GS + + +D G T +
Sbjct: 1031 KTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE 1090
Query: 114 GHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVD 172
GH D ++V + G I D + G + + + +V F D
Sbjct: 1091 GHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG----TCTQTLEGHGGWVHSVAFSPD 1146
Query: 173 DDYVAVGSIDGNIYVWDC 190
VA GSIDG I +WD
Sbjct: 1147 GQRVASGSIDGTIKIWDA 1164
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 50/216 (23%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ F D +V SGS D+T+KIWD S T+T V + + SG D
Sbjct: 845 LSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDD 904
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGA--------- 107
K ++ WD + + +E H G++ S+ S + +GS + + +D A
Sbjct: 905 KTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLE 964
Query: 108 --------------GTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFV 153
G + SG DK ++ WD + + +E HG G + V
Sbjct: 965 GHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHG---------GSVWSV 1015
Query: 154 FAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWD 189
F D VA GS D I +WD
Sbjct: 1016 --------------AFSPDGQRVASGSDDKTIKIWD 1037
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 68/188 (36%), Gaps = 44/188 (23%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 61
F D +V SGS D T+KIWD S T+T V + G + SG D ++
Sbjct: 1101 FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIK 1160
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
WD + + +E HG V + G + SG DK ++
Sbjct: 1161 IWDAASGTCTQTLEGHGGWV------------------QSVAFSPDGQRVASGSSDKTIK 1202
Query: 122 FWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSI 181
WD + + +E HG G+ VQ F D VA GS
Sbjct: 1203 IWDTASGTCTQTLEGHG------------------GW-VQS----VAFSPDGQRVASGSS 1239
Query: 182 DGNIYVWD 189
D I +WD
Sbjct: 1240 DNTIKIWD 1247
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 61
F D +V SGS D T+KIWD S T+T V + G + SG DK ++
Sbjct: 1143 FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIK 1202
Query: 62 FWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTT 110
WD + + +E HG + S+ S + +GSS N + +D A T
Sbjct: 1203 IWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGT 1252
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 52/228 (22%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFD 57
+C F T + +GS D T K+WD+ + + + AG + + ++ G I++G FD
Sbjct: 183 VCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFD 242
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
R WD R + V + H G+++S ++ AGT ++SG
Sbjct: 243 HDSRLWDVRTGQCVHVLSGHRGEVSS-------------------TQFNYAGTLVVSGSI 283
Query: 117 DKKVRFWDFRA----------EEKVRDIELHGKIT-----SLDLSKGKYY---------F 152
D R WD R+ ++V D+ T S D S Y+
Sbjct: 284 DCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTL 343
Query: 153 VFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
V EG + ++ F + S D +WDC+T + VL+
Sbjct: 344 VGHEG-----EISKVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLE 386
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 47/194 (24%)
Query: 11 KVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY----DGAGTTIISGHFDKKVRFWDFR 66
+ ++GS DRT K+W+ + E F ++V + G I++G FDK + WD
Sbjct: 108 RFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAY 167
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
+ + KG +T+ ++++ T I +G D + WD
Sbjct: 168 TGQLYYTL------------KGHQTEIV------CLSFNPQSTIIATGSMDNTAKLWDVE 209
Query: 127 AEEKVRDIELH-GKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNI 185
++ + H +I SL + G D + GS D +
Sbjct: 210 TGQERATLAGHRAEIVSLGFNTG------------------------GDLIVTGSFDHDS 245
Query: 186 YVWDCNTEQVEAVL 199
+WD T Q VL
Sbjct: 246 RLWDVRTGQCVHVL 259
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 40/156 (25%)
Query: 44 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT 103
++ +G I+G +D+ + W+ E+V +E H + +A + N
Sbjct: 102 FNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVV-----------YAIAFNNPY-- 148
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCD 163
G I++G FDK + WD G++ YY + ++ C
Sbjct: 149 ----GDKIVTGSFDKTCKLWDAYT----------GQL---------YYTLKGHQTEIVC- 184
Query: 164 FTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVL 199
F +A GS+D +WD T Q A L
Sbjct: 185 ---LSFNPQSTIIATGSMDNTAKLWDVETGQERATL 217
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 40/209 (19%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVR 61
F GD +V+ S D+T+K+W + + F+ + + V + G I+S DK ++
Sbjct: 110 FSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIK 169
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
WD + E ++ HG + V + +GT I + D V+
Sbjct: 170 LWDKTSRECIQSFCEHGGFV------------------NFVDFHPSGTCIAAAATDNTVK 211
Query: 122 FWDFRAEEKVRDIELH-GKITSLDLSKGKYYFVFAEG---FKV---------------QC 162
WD R + ++ ++H G + SL Y + A KV Q
Sbjct: 212 VWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQG 271
Query: 163 DFTRAVFVVDDDYVAVGSIDGNIYVWDCN 191
T F + D+ A G D + VW N
Sbjct: 272 PVTCVKFSREGDFFASGGSDEQVMVWKTN 300
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRST--ETKFAGSSCNDL-VTYDGAGTTIISGHFDKKVR 61
F + ++ SGS D L +W++++ +F G L V + +G I S DK VR
Sbjct: 26 FNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVR 85
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKF-AGSSCNDLVTYDGAGTTIISGHFDKKV 120
W + S+ KG T F A + V++ G G ++++ DK +
Sbjct: 86 LW----------------VPSV---KGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTI 126
Query: 121 RFWDFRAEEKVRDIELH 137
+ W ++ + + H
Sbjct: 127 KVWTVHRQKFLFSLNQH 143
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 9 PTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
P V +GS D T+K+WD+R F + VT++ IISG D ++ WD R
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 67 AEEKVRDIELHG-KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
+ + H +T L LS G+ ++S D VR WD
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSS-------------------EGSYLLSNAMDNTVRVWDV 264
Query: 126 RA-EEKVRDIEL-HGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
R K R +++ G + + + + R + D +A GS D
Sbjct: 265 RPFAPKERCVKIFQGNVHNFEK-----------------NLLRCSWSPDGSKIAAGSADR 307
Query: 184 NIYVWDCNTEQV 195
++ VWD + ++
Sbjct: 308 SVCVWDTTSRRI 319
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 52/197 (26%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE-----TKFAGSSCNDLVTYDGAGTTIISGHF 56
CA+F D + S DRT+++WD S + T + GS+ V ++ +GT I S
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT--FVDFNSSGTCIASSGA 206
Query: 57 DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
D ++ WD R + ++ ++H AG +C ++ +G +ISG
Sbjct: 207 DNTIKIWDIRTNKLIQHYKVHN---------------AGVNC---FSFHPSGNYLISGSS 248
Query: 117 DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVF--AEGFKVQCDFTRAVFVVDDD 174
D ++ LDL +G+ + +G + F+R D D
Sbjct: 249 DSTIKI--------------------LDLLEGRLIYTLHGHKGPVLTVTFSR-----DGD 283
Query: 175 YVAVGSIDGNIYVWDCN 191
A G D + +W N
Sbjct: 284 LFASGGADSQVLMWKTN 300
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAGTTIISGHFDK 58
CA F + ++ +GSCD++L IW+L F D++T + +G+ + S D+
Sbjct: 23 CADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQ 82
Query: 59 KVRFW 63
VR W
Sbjct: 83 TVRLW 87
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 44/193 (22%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY---DGAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R ++ +LH S+ + +++ +G +I+ D
Sbjct: 210 TVKVWDARTHRLLQHYQLH------------------SAAVNALSFHPSGNYLITASSDS 251
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
++ LDL +G+ + G Q T F +Y A
Sbjct: 252 TLKI--------------------LDLMEGRLLYTL-HGH--QGPATTVAFSRTGEYFAS 288
Query: 179 GSIDGNIYVWDCN 191
G D + VW N
Sbjct: 289 GGSDEQVMVWKSN 301
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 77/221 (34%), Gaps = 50/221 (22%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAGTTIISGHFDK 58
C F + + SGS D TL IW ++ + + D VT + +G + SG DK
Sbjct: 24 CVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDK 83
Query: 59 KVRFW---------DFRAE-EKVRDIELHGKITSLDLSKGTET---------KFAGSSCN 99
VR W FRA VR + SL + +T +F S
Sbjct: 84 TVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQ 143
Query: 100 DL-----VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVF 154
+ + G I+S DK V+ WD + E + HG
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG---------------- 187
Query: 155 AEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQV 195
GF DF + +A +D + VWD T ++
Sbjct: 188 --GFVTYVDFHPS-----GTCIAAAGMDNTVKVWDARTHRL 221
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 73/193 (37%), Gaps = 44/193 (22%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY---DGAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R ++ +LH S+ + +++ +G +++ D
Sbjct: 210 TVKVWDVRTHRLLQHYQLH------------------SAAVNALSFHPSGNYLVTASSDS 251
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
++ LDL +G+ + G Q T F +Y A
Sbjct: 252 TLKI--------------------LDLMEGRLLYTL-HGH--QGPATTVAFSRTGEYFAS 288
Query: 179 GSIDGNIYVWDCN 191
G D + VW N
Sbjct: 289 GGSDEQVMVWKSN 301
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 73/212 (34%), Gaps = 50/212 (23%)
Query: 11 KVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAGTTIISGHFDKKVRFW---- 63
++ SGS D L +W ++ + + D VT + +G + SG DK VR W
Sbjct: 33 QLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 64 -----DFRAE-EKVRDIELHGKITSLDLSKGTET---------KFAGSSCNDL-----VT 103
FRA VR + S + +T KF S +
Sbjct: 93 KGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAK 152
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCD 163
+ G I+S DK V+ WD + E V HG GF D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG------------------GFVTYVD 194
Query: 164 FTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQV 195
F + +A +D + VWD T ++
Sbjct: 195 FHPS-----GTCIAAAGMDNTVKVWDVRTHRL 221
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 40/209 (19%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVR 61
F GD +V+ S D+T+K+W + + F+ + + V + G I+S DK ++
Sbjct: 110 FSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIK 169
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
WD + E + HG + V + +GT I + D V+
Sbjct: 170 LWDKTSRECIHSFCEHGGFV------------------NFVDFHPSGTCIAAAATDNTVK 211
Query: 122 FWDFRAEEKVRDIELH-GKITSLDLSKGKYYFVFAEG---FKV---------------QC 162
WD R + ++ ++H G + SL Y + A KV Q
Sbjct: 212 VWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQG 271
Query: 163 DFTRAVFVVDDDYVAVGSIDGNIYVWDCN 191
T F + ++ A G D + VW N
Sbjct: 272 PVTSVKFSREGEFFASGGSDEQVMVWKTN 300
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCN-----DLVTYDGAGTTIISGHF 56
CAKF D +VS S D+T+K+WD S E S C + V + +GT I +
Sbjct: 149 CAKFSPDGRLIVSASDDKTIKLWDKTSREC--IHSFCEHGGFVNFVDFHPSGTCIAAAAT 206
Query: 57 DKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGH 115
D V+ WD R + ++ ++H G + SL ++ +G +I+
Sbjct: 207 DNTVKVWDIRMNKLIQHYQVHSGVVNSL-------------------SFHPSGNYLITAS 247
Query: 116 FDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFV 153
D ++ D + + H G +TS+ S+ +F
Sbjct: 248 NDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFFA 286
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 48/190 (25%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRST--ETKFAGSSCNDL-VTYDGAGTTIISGHFDKKVR 61
F + ++ SGS D L IW+++ +F G L V + +G I S DK VR
Sbjct: 26 FNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVR 85
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKF-AGSSCNDLVTYDGAGTTIISGHFDKKV 120
W + S+ KG T F A + V++ G G ++++ DK +
Sbjct: 86 LW----------------VPSV---KGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTI 126
Query: 121 RFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFK-VQCDFTRAVFVVDDDYVAVG 179
+ W + + K+ F + V+C A F D +
Sbjct: 127 KVW--------------------TVHRQKFLFSLNQHINWVRC----AKFSPDGRLIVSA 162
Query: 180 SIDGNIYVWD 189
S D I +WD
Sbjct: 163 SDDKTIKLWD 172
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 44/193 (22%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY---DGAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R ++ +LH S+ + +++ +G +I+ D
Sbjct: 210 TVKVWDVRTHRLLQHYQLH------------------SAAVNGLSFHPSGNYLITASSDS 251
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
++ LDL +G+ + G Q T F +Y A
Sbjct: 252 TLKI--------------------LDLMEGRLLYTL-HGH--QGPATTVAFSRTGEYFAS 288
Query: 179 GSIDGNIYVWDCN 191
G D + VW N
Sbjct: 289 GGSDEQVMVWKSN 301
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 76/221 (34%), Gaps = 50/221 (22%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAGTTIISGHFDK 58
C F + ++ SGS D L +W ++ + + D VT + +G + SG DK
Sbjct: 24 CVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDK 83
Query: 59 KVRFW---------DFRAE-EKVRDIELHGKITSLDLSKGTET---------KFAGSSCN 99
VR W FRA VR + S + +T KF S
Sbjct: 84 TVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ 143
Query: 100 DL-----VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVF 154
+ + G I+S DK V+ WD + E V HG
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG---------------- 187
Query: 155 AEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQV 195
GF DF + +A +D + VWD T ++
Sbjct: 188 --GFVTYVDFHPS-----GTCIAAAGMDNTVKVWDVRTHRL 221
>sp|B6Q4Z5|SCONB_PENMQ Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59
/ QM 7333) GN=sconB PE=3 SV=1
Length = 660
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 86/227 (37%), Gaps = 69/227 (30%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHF----- 56
C +F D TK++SGS DRTLK+W+ R+ E + TY G II HF
Sbjct: 387 CLQF--DETKLISGSIDRTLKVWNWRTGEC---------ISTYTGHLGGIIGLHFQNSIL 435
Query: 57 -----DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTI 111
DK V+ W+F K T S + V D T+
Sbjct: 436 ASGSTDKTVKIWNFE-------------------DKSTFLLRGHSDWVNAVRVDSCSRTV 476
Query: 112 ISGHFDKKVRFWDFRAEEKVRDIELH-GKITS-LDLSKGKYYFVFAEGF----------- 158
+S D V+ WD +++ +R + H G++ + L + F F EG
Sbjct: 477 LSASDDCTVKLWDLDSKQCIRTFQGHVGQVQQVIPLPR---EFEFEEGHDASHEEDSNAS 533
Query: 159 ---------KVQCDFTRAVFVVD----DDYVAVGSIDGNIYVWDCNT 192
+V C T A F D Y+ ++D I +W+ T
Sbjct: 534 VSGDESPSSQVSCSPTAAFFEGDRPAPPRYILTSALDSTIRLWETYT 580
Score = 36.2 bits (82), Expect = 0.17, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 7 GDPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCNDLVTYDGAG-TTIISGHFDKKVRFW 63
D ++VSG+ DR +KIWD R+ E F G S VT G G + ++G D +VR +
Sbjct: 599 ADTLRIVSGAEDRMVKIWDPRTGKCERTFTGHS--GPVTCVGLGDSCFVTGSEDCEVRIY 656
Query: 64 DFR 66
F+
Sbjct: 657 SFK 659
>sp|B8M7Q5|SCONB_TALSN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=sconB PE=3 SV=1
Length = 667
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
C +F D TK++SGS DRTLK+W+ R+ E + + G ++ + + SG D
Sbjct: 394 CLQF--DDTKLISGSIDRTLKVWNWRTGECISTYTG-HLGGIIGLHFENSVLASGSIDNT 450
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 119
V+ W+F K T S + V D A T++S D
Sbjct: 451 VKIWNFE-------------------DKSTFLLRGHSDWVNAVRVDSASRTVLSASDDCT 491
Query: 120 VRFWDFRAEEKVRDIELH 137
V+ WD +++ +R + H
Sbjct: 492 VKLWDLDSKQCIRTFQGH 509
Score = 34.3 bits (77), Expect = 0.62, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 7 GDPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCNDLVTYDGAG-TTIISGHFDKKVRFW 63
D ++VSG+ DR +KIWD R+ E F G S VT G G + ++G D +VR
Sbjct: 606 ADTLRIVSGAEDRMVKIWDPRTGKCERTFTGHS--GPVTCVGLGDSCFVTGSEDCEVRIH 663
Query: 64 DFR 66
F+
Sbjct: 664 SFK 666
>sp|Q6GL39|WDR82_XENTR WD repeat-containing protein 82 OS=Xenopus tropicalis GN=wdr82 PE=2
SV=1
Length = 313
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 50 TIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLD-----LSKGTETKFAGSSCNDLVT 103
T ISG DK +R WD R+ + L GK + S D + G ++ DL +
Sbjct: 121 TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMV--KLYDLRS 178
Query: 104 YDGAGTTIISGHFDKKVRF--WDFRAEEKVRDIELHGKITSL-DLSKGKYYFVFAEGFKV 160
+D +D+ + F + K+ + +G L D KG F
Sbjct: 179 FDKGPFATFKMQYDRTCEWTALKFSNDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNNS 238
Query: 161 QCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLKDMH 203
+ A F D ++ +GS DG I+VW+C + AVL H
Sbjct: 239 KAVTLEATFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKH 281
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 72/224 (32%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDG-------AGTTIISG 54
C +F G+ ++VSGS D TLK+W + G LV + G +G IISG
Sbjct: 1000 CLQFSGN--RIVSGSDDNTLKVW------SAVNGKCLRTLVGHTGGVWSSQMSGNIIISG 1051
Query: 55 HFDKKVRFWDFRA----------EEKVRDIELHG-KITS---------LDLSKGT----- 89
D+ ++ WD + VR + LHG K+ S D+ +G+
Sbjct: 1052 STDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVL 1111
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKG 148
A C V YD G I+SG +D V+ W +E + ++ H ++ SL
Sbjct: 1112 VGHLAAVRC---VQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--- 1163
Query: 149 KYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D +V GS+D +I VWD T
Sbjct: 1164 -----------------------DGLHVVSGSLDTSIRVWDVET 1184
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 75/210 (35%), Gaps = 55/210 (26%)
Query: 10 TKVVSGSCDRTLKIWDLRSTET------KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 63
+KVVSGS D TL++WD+ A C V YD G I+SG +D V+ W
Sbjct: 1086 SKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRC---VQYD--GKLIVSGAYDYMVKIW 1140
Query: 64 DFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 122
+E + ++ H ++ SL G ++SG D +R
Sbjct: 1141 HPERQECLHTLQGHTNRVYSLQFD---------------------GLHVVSGSLDTSIRV 1179
Query: 123 WDFRAEEKVRDIELHGKITS--------------------LDLSKGKYYFVFAEGFKVQC 162
WD + H +TS D++ G+ + K
Sbjct: 1180 WDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHS 1239
Query: 163 DFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
T F + +V S DG + +WD T
Sbjct: 1240 AVTCLQF--NSRFVVTSSDDGTVKLWDVKT 1267
Score = 35.4 bits (80), Expect = 0.23, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT-YDGAGTTIISGHFDKKVRFWDFR 66
D VVSGS D ++++WD+ + K L + + ++SG+ D V+ WD
Sbjct: 1164 DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDIT 1223
Query: 67 AEEKVRDI----ELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 122
+ ++ + + H +T L + ++F +S +D GT V+
Sbjct: 1224 TGQCLQTLSGPNKHHSAVTCLQFN----SRFVVTSSDD-------GT----------VKL 1262
Query: 123 WDFRAEEKVRDI 134
WD + + +R++
Sbjct: 1263 WDVKTGDFIRNL 1274
>sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B OS=Xenopus laevis GN=wdr82-b PE=2
SV=1
Length = 313
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 50 TIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLD-----LSKGTETKFAGSSCNDLVT 103
T ISG DK +R WD R+ + L GK + S D + G ++ DL +
Sbjct: 121 TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMV--KLYDLRS 178
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH---GKITSLDLSKGKYYFVFAEGFKV 160
+D +D+ + + + I L G + +D KG F
Sbjct: 179 FDKGPFATFKMQYDRTCEWTALKFSNDGKLILLSTNGGFLRLVDAFKGAVMHTFGGYNNS 238
Query: 161 QCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLKDMH 203
+ A F D ++ +GS DG I+VW+C + AVL H
Sbjct: 239 KAVTLEASFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKH 281
>sp|P47025|MDV1_YEAST Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MDV1 PE=1 SV=1
Length = 714
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 53/183 (28%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS------TETKFAG----------------------SSCN 39
DP+ +VSGS DRT++ WDLRS + FA S
Sbjct: 511 DPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNERPSIG 570
Query: 40 DLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSC 98
L ++D A + +G D VR WD R+ + +R ++ H ITSL S+C
Sbjct: 571 ALQSFDAA---LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSLKFD---------SAC 618
Query: 99 NDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGF 158
+++G +D+ VR WD R + + SLDL + V A+
Sbjct: 619 ------------LVTGSYDRTVRIWDLRTGLLNKFHAYSAPVLSLDLFQENAAVVVADEP 666
Query: 159 KVQ 161
VQ
Sbjct: 667 SVQ 669
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 57/219 (26%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLR------------STETKFAGSSC--------NDL 41
C + D +V+G D LK+W+L ++ T S C +++
Sbjct: 446 CMQINRDYGTLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVHTFEAHTDEV 505
Query: 42 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-----GKITSLDLSKGT--ETKFA 94
+ ++SG D+ +R WD R+ + ++ I+L T++DLSK T +
Sbjct: 506 TALSLDPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNE 565
Query: 95 GSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFV 153
S L ++D A + +G D VR WD R+ + +R ++ H ITSL
Sbjct: 566 RPSIGALQSFDAA---LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSLKF-------- 614
Query: 154 FAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D + GS D + +WD T
Sbjct: 615 ------------------DSACLVTGSYDRTVRIWDLRT 635
Score = 37.4 bits (85), Expect = 0.072, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 10 TKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGT-----TIISGHFDKKVRFWD 64
T +G D T+KIWDL S + K G L T + T+++G D ++ W+
Sbjct: 412 TLCTAGYLDHTVKIWDL-SKQNKI-GELAGHLATINCMQINRDYGTLVTGGRDAALKLWN 469
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSC--------NDLVTYDGAGTTIISGHF 116
+ +L+ + +L + T S C +++ + ++SG
Sbjct: 470 LNLAQ-----QLYQETQNLT----SPTNHIDSPCVHTFEAHTDEVTALSLDPSFLVSGSQ 520
Query: 117 DKKVRFWDFRAEEKVRDIELH-----GKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVV 171
D+ +R WD R+ + ++ I+L T++DLSK E +
Sbjct: 521 DRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNERPSI------GALQS 574
Query: 172 DDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
D +A G+ DG + +WD + +V LK
Sbjct: 575 FDAALATGTKDGVVRLWDLRSGKVIRTLK 603
>sp|A6ZQL5|MDV1_YEAS7 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MDV1 PE=3 SV=1
Length = 714
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 53/183 (28%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS------TETKFAG----------------------SSCN 39
DP+ +VSGS DRT++ WDLRS + FA S
Sbjct: 511 DPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNERPSIG 570
Query: 40 DLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSC 98
L ++D A + +G D VR WD R+ + +R ++ H ITSL S+C
Sbjct: 571 ALQSFDAA---LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSLKFD---------SAC 618
Query: 99 NDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGF 158
+++G +D+ VR WD R + + SLDL + V A+
Sbjct: 619 ------------LVTGSYDRTVRIWDLRTGLLNKFHAYSAPVLSLDLFQENAAVVVADEP 666
Query: 159 KVQ 161
VQ
Sbjct: 667 SVQ 669
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 57/219 (26%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLR------------STETKFAGSSC--------NDL 41
C + D +V+G D LK+W+L ++ T S C +++
Sbjct: 446 CMQINRDYGTLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVYTFEAHTDEV 505
Query: 42 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-----GKITSLDLSKGT--ETKFA 94
+ ++SG D+ +R WD R+ + ++ I+L T++DLSK T +
Sbjct: 506 TALSLDPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNE 565
Query: 95 GSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFV 153
S L ++D A + +G D VR WD R+ + +R ++ H ITSL
Sbjct: 566 RPSIGALQSFDAA---LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSLKF-------- 614
Query: 154 FAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D + GS D + +WD T
Sbjct: 615 ------------------DSACLVTGSYDRTVRIWDLRT 635
Score = 37.7 bits (86), Expect = 0.058, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 10 TKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGT-----TIISGHFDKKVRFWD 64
T +G D T+KIWDL S + K G L T + T+++G D ++ W+
Sbjct: 412 TLCTAGYLDHTVKIWDL-SKQNKI-GELAGHLATINCMQINRDYGTLVTGGRDAALKLWN 469
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTT-IISGHFDKKVRFW 123
+++ + +TS + + + D VT + ++SG D+ +R W
Sbjct: 470 LNLAQQL--YQETQNLTSPTNHIDSPCVYTFEAHTDEVTALSLDPSFLVSGSQDRTIRQW 527
Query: 124 DFRAEEKVRDIELH-----GKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
D R+ + ++ I+L T++DLSK E + D +A
Sbjct: 528 DLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRNERPSI------GALQSFDAALAT 581
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
G+ DG + +WD + +V LK
Sbjct: 582 GTKDGVVRLWDLRSGKVIRTLK 603
>sp|Q6FLI3|CAF4_CANGA CCR4-associated factor 4 homolog OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAF4 PE=3 SV=1
Length = 579
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCND-LVTYDG----------AGTTI 51
+F+ D + S D ++K+WD+ + K ++ N L T+DG G I
Sbjct: 329 TRFIDDTRLLASAGKDASVKVWDVDNIVDKDGNANDNLCLATFDGHKDSVTALATTGNAI 388
Query: 52 ISGHFDKKVRFWDFRAEEKVRDIEL-------HGKITSLDLSKGTETKFAGSSCNDLVTY 104
+SG DK +R WD + + ++ I+L ++ LD++ T G +
Sbjct: 389 VSGSNDKTLRHWDLGSGKCIQSIDLTIALKMVPQSVSKLDITPSFNTPLIGGA------- 441
Query: 105 DGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH-GKITSL 143
D +++G D V WD R V +E H G ITSL
Sbjct: 442 DCIDNALVTGTKDGIVYLWDLRIGRVVGSLEGHRGPITSL 481
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGS---SCNDLVTYDGAGTTIISGHFDKKVRFWDFRAE 68
+V+G+ D + +WDLR + GS + + G+ +I+G DK R WD R
Sbjct: 448 LVTGTKDGIVYLWDLRIG--RVVGSLEGHRGPITSLKYMGSELITGSMDKSTRIWDLRMG 505
Query: 69 EKVRDIELHGKITSLDLSK 87
+ ++ S++ S+
Sbjct: 506 SVAELLSFEKEVVSVEESQ 524
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 101 LVTYDG----------AGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKY 150
L T+DG G I+SG DK +R WD + + ++ I+L + + S K
Sbjct: 368 LATFDGHKDSVTALATTGNAIVSGSNDKTLRHWDLGSGKCIQSIDLTIALKMVPQSVSK- 426
Query: 151 YFVFAEGFKVQCDF-TRAVFVVD--DDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
+ F T + D D+ + G+ DG +Y+WD +V L+
Sbjct: 427 -------LDITPSFNTPLIGGADCIDNALVTGTKDGIVYLWDLRIGRVVGSLE 472
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 63
K++G +++++GS D++ +IWDLR S ++V+ + + T +I+ + V+ +
Sbjct: 482 KYMG--SELITGSMDKSTRIWDLRMGSVAELLSFEKEVVSVEESQTQLINALEGEPVKIY 539
Query: 64 DFRAEEKVRDIE 75
D R E + +
Sbjct: 540 D-RGERQYNSLP 550
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ +GT I S D+
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R + ++ ++H G +C +++ +G +I+ D
Sbjct: 209 TVKVWDVRVNKLLQHYQVHS---------------GGVNC---ISFHPSGNYLITASSDG 250
Query: 119 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFV 153
++ D + ++ H G + ++ SKG F
Sbjct: 251 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
C +F D TK++SGS DRT+K+W RS E + + G L + + TT+ SG D
Sbjct: 383 CLQF--DDTKLISGSLDRTIKVWSWRSGECISTYTGHQGGVLCLHFDS-TTLASGSKDNT 439
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 119
++ W+F+ K T+ + + V D A T+ S D
Sbjct: 440 IKIWNFQ-------------------DKSTQILRGHTDWVNAVKLDTASRTVFSASDDLT 480
Query: 120 VRFWDF 125
VR WD
Sbjct: 481 VRIWDL 486
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFD 57
MC +F D + +GS D T+KIWD+ + T S + +D T +ISG D
Sbjct: 342 MCLQF--DDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFD--DTKLISGSLD 397
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
+ ++ W +R+ E + H G + L T + + + + T I+ GH
Sbjct: 398 RTIKVWSWRSGECISTYTGHQGGVLCLHFDSTTLASGSKDNTIKIWNFQDKSTQILRGHT 457
Query: 117 D 117
D
Sbjct: 458 D 458
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 27 RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 86
R T T F G + N ++ + +G +D ++ WD +++R +
Sbjct: 328 RCTTTIFRGHT-NGVMCLQFDDNILATGSYDATIKIWDIETGKEIRTL------------ 374
Query: 87 KGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+G E+ +D T +ISG D+ ++ W +R+ E
Sbjct: 375 RGHESTIRCLQFDD--------TKLISGSLDRTIKVWSWRSGE 409
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 50.4 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 58/197 (29%)
Query: 11 KVVSGSCDRTLKIWDLRSTET------KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
+VVSGS D TL++WD+ + + A C V YD G ++SG +D V+ WD
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC---VQYD--GRRVVSGAYDFMVKVWD 527
Query: 65 FRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 123
E + ++ H ++ SL G ++SG D +R W
Sbjct: 528 PETETCLHTLQGHTNRVYSLQFD---------------------GIHVVSGSLDTSIRVW 566
Query: 124 DFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
D + + H +TS G +++ D+ + G+ D
Sbjct: 567 DVETGNCIHTLTGHQSLTS--------------GMELK-----------DNILVSGNADS 601
Query: 184 NIYVWDCNTEQVEAVLK 200
+ +WD T Q L+
Sbjct: 602 TVKIWDIKTGQCLQTLQ 618
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 81/220 (36%), Gaps = 64/220 (29%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGA-------GTTIISG 54
C +F G+ ++VSGS D TLK+W + G LV + G IISG
Sbjct: 386 CLQFCGN--RIVSGSDDNTLKVW------SAVTGKCLRTLVGHTGGVWSSQMRDNIIISG 437
Query: 55 HFDKKVRFWDFRAEE----------KVRDIELHGK------------ITSLDLSKGTETK 92
D+ ++ W+ E VR + LH K + ++ +
Sbjct: 438 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 497
Query: 93 FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYF 152
+ V YD G ++SG +D V+ WD E T L +G
Sbjct: 498 MGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE------------TCLHTLQGHTNR 543
Query: 153 VFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
V++ F D +V GS+D +I VWD T
Sbjct: 544 VYSLQF-------------DGIHVVSGSLDTSIRVWDVET 570
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 49/194 (25%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET---KFAGSSCNDLVTYDGAGTTIISGHFDK 58
C ++ D +VVSG+ D +K+WD TET G + N + + G ++SG D
Sbjct: 506 CVQY--DGRRVVSGAYDFMVKVWD-PETETCLHTLQGHT-NRVYSLQFDGIHVVSGSLDT 561
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
+R WD + + H +TS G E K ++SG+ D
Sbjct: 562 SIRVWDVETGNCIHTLTGHQSLTS-----GMELK---------------DNILVSGNADS 601
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
V+ WD + + ++ ++ K S V C + ++V
Sbjct: 602 TVKIWDIKTGQCLQTLQGPNKHQS----------------AVTC------LQFNKNFVIT 639
Query: 179 GSIDGNIYVWDCNT 192
S DG + +WD T
Sbjct: 640 SSDDGTVKLWDLKT 653
Score = 37.0 bits (84), Expect = 0.085, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT-YDGAGTTIISGHFDKKVRFWDFR 66
D VVSGS D ++++WD+ + + L + + ++SG+ D V+ WD +
Sbjct: 550 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 609
Query: 67 AEEKVRDIELHGK----ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 122
+ ++ ++ K +T L +K N ++T GT V+
Sbjct: 610 TGQCLQTLQGPNKHQSAVTCLQFNK-----------NFVITSSDDGT----------VKL 648
Query: 123 WDFRAEEKVRDI 134
WD + E +R++
Sbjct: 649 WDLKTGEFIRNL 660
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 73/192 (38%), Gaps = 41/192 (21%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT--YDGAGTTIISGHFDKKVRF 62
F D ++VSGS DR+++IWDLR+++ S + + T G I +G D+ VR
Sbjct: 304 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRV 363
Query: 63 WD----FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
WD F E L G E V + G I SG D+
Sbjct: 364 WDSTTGFLVER---------------LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 408
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVDDDYVA 177
V+ W L GK + Y G K DF +V D++Y+
Sbjct: 409 TVKLW-----------HLEGKSDKKSTCEVTYI-----GHK---DFVLSVCCTPDNEYIL 449
Query: 178 VGSIDGNIYVWD 189
GS D + WD
Sbjct: 450 SGSKDRGVIFWD 461
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 62/209 (29%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCND---------------LVTY 44
C +F D K ++ C++T +++++ + E K S N+ V +
Sbjct: 204 CVRFSRD-GKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCF 262
Query: 45 DGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVT 103
G + +G DK +R WD + ++ + H + I SLD
Sbjct: 263 SPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLD------------------- 303
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCD 163
+ G ++SG D+ VR WD R + + + +T++ +S
Sbjct: 304 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSP---------------- 347
Query: 164 FTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D +A GS+D + VWD T
Sbjct: 348 --------DGKLIAAGSLDRTVRVWDSTT 368
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 73/192 (38%), Gaps = 41/192 (21%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT--YDGAGTTIISGHFDKKVRF 62
F D ++VSGS DR+++IWDLR+++ S + + T G I +G D+ VR
Sbjct: 305 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRV 364
Query: 63 WD----FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
WD F E L G E V + G I SG D+
Sbjct: 365 WDSTTGFLVER---------------LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAV-FVVDDDYVA 177
V+ W L GK + Y G K DF +V D++Y+
Sbjct: 410 TVKLW-----------HLEGKSDKKSTCEVTYI-----GHK---DFVLSVCCTPDNEYIL 450
Query: 178 VGSIDGNIYVWD 189
GS D + WD
Sbjct: 451 SGSKDRGVIFWD 462
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 62/209 (29%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCND---------------LVTY 44
C +F D K ++ C++T +++++ + E K S N+ V +
Sbjct: 205 CVRFSRD-GKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCF 263
Query: 45 DGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVT 103
G + +G DK +R WD + ++ + H + I SLD
Sbjct: 264 SPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLD------------------- 304
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCD 163
+ G ++SG D+ VR WD R + + + +T++ +S
Sbjct: 305 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSP---------------- 348
Query: 164 FTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
D +A GS+D + VWD T
Sbjct: 349 --------DGKLIAAGSLDRTVRVWDSTT 369
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAGTTIISGHFDK 58
C F T + SGS D T++IW R+ T F+ D V+ ++ G + SG +D
Sbjct: 195 CCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDG 254
Query: 59 KVRFWDFRAEEKVRDI--ELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
VR WD V+ + E H IT + S G I++ +
Sbjct: 255 IVRIWDSTTGTCVKTLIDEEHPPITHVKFSPN-------------------GKYILASNL 295
Query: 117 DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYV 176
+ ++ WD+ +K+R ++ + T + SK + V +F+ V ++
Sbjct: 296 NNTLKLWDY---QKLRVLK---EYTGHENSK----------YCVAANFS----VTGGKWI 335
Query: 177 AVGSIDGNIYVWDCNTEQVEAVL 199
GS D +Y+W+ T ++ L
Sbjct: 336 VSGSEDHKVYIWNLQTREILQTL 358
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 43/191 (22%)
Query: 4 KFLGDPTKVVSGSCDRTLKIW--DLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 61
KF D + SGS D ++KIW D +T + ++ I+S DK V+
Sbjct: 114 KFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVK 173
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
+D + V+ ++ H T + C ++ +GT I SG FD+ +R
Sbjct: 174 VFDVSSGRCVKTLKGH-------------TNYVFCCC-----FNPSGTLIASGSFDETIR 215
Query: 122 FWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSI 181
W R + I H + + F D Y+A GS
Sbjct: 216 IWCARNGNTIFSIPGH-----------------------EDPVSSVCFNRDGAYLASGSY 252
Query: 182 DGNIYVWDCNT 192
DG + +WD T
Sbjct: 253 DGIVRIWDSTT 263
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 58/197 (29%)
Query: 11 KVVSGSCDRTLKIWDLRSTET------KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
+VVSGS D TL++WD+ + + A C V YD G ++SG +D V+ WD
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC---VQYD--GRRVVSGAYDFMVKVWD 449
Query: 65 FRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 123
E + ++ H ++ SL G ++SG D +R W
Sbjct: 450 PETETCLHTLQGHTNRVYSLQFD---------------------GIHVVSGSLDTSIRVW 488
Query: 124 DFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGSIDG 183
D + + H +TS G +++ D+ + G+ D
Sbjct: 489 DVETGNCIHTLTGHQSLTS--------------GMELK-----------DNILVSGNADS 523
Query: 184 NIYVWDCNTEQVEAVLK 200
+ +WD T Q L+
Sbjct: 524 TVKIWDIKTGQCLQTLQ 540
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 81/220 (36%), Gaps = 64/220 (29%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGA-------GTTIISG 54
C +F G+ ++VSGS D TLK+W + G LV + G IISG
Sbjct: 308 CLQFCGN--RIVSGSDDNTLKVW------SAVTGKCLRTLVGHTGGVWSSQMRDNIIISG 359
Query: 55 HFDKKVRFWDFRAEE----------KVRDIELHGK------------ITSLDLSKGTETK 92
D+ ++ W+ E VR + LH K + ++ +
Sbjct: 360 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 419
Query: 93 FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYF 152
+ V YD G ++SG +D V+ WD E T L +G
Sbjct: 420 MGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE------------TCLHTLQGHTNR 465
Query: 153 VFAEGFKVQCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNT 192
V++ F D +V GS+D +I VWD T
Sbjct: 466 VYSLQF-------------DGIHVVSGSLDTSIRVWDVET 492
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 49/194 (25%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET---KFAGSSCNDLVTYDGAGTTIISGHFDK 58
C ++ D +VVSG+ D +K+WD TET G + N + + G ++SG D
Sbjct: 428 CVQY--DGRRVVSGAYDFMVKVWD-PETETCLHTLQGHT-NRVYSLQFDGIHVVSGSLDT 483
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
+R WD + + H +TS G E K ++SG+ D
Sbjct: 484 SIRVWDVETGNCIHTLTGHQSLTS-----GMELK---------------DNILVSGNADS 523
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAV 178
V+ WD + + ++ ++ K S V C + ++V
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQS----------------AVTC------LQFNKNFVIT 561
Query: 179 GSIDGNIYVWDCNT 192
S DG + +WD T
Sbjct: 562 SSDDGTVKLWDLKT 575
Score = 37.0 bits (84), Expect = 0.087, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT-YDGAGTTIISGHFDKKVRFWDFR 66
D VVSGS D ++++WD+ + + L + + ++SG+ D V+ WD +
Sbjct: 472 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 531
Query: 67 AEEKVRDIELHGK----ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 122
+ ++ ++ K +T L +K N ++T GT V+
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNK-----------NFVITSSDDGT----------VKL 570
Query: 123 WDFRAEEKVRDI 134
WD + E +R++
Sbjct: 571 WDLKTGEFIRNL 582
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 56/214 (26%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
V+SG+C RT++ T F S ++ + I S FD+ VR WDF+ V
Sbjct: 284 VISGACLRTMR----GHTNYVFCCS-------FNPQSSLIASAGFDETVRVWDFKTGLCV 332
Query: 72 RDIELHG-KITSLDLSKGTET--------------KFAGSSCNDLVTYDGAGTT------ 110
+ I H ITS+ + T +GS LV D A T
Sbjct: 333 KCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSP 392
Query: 111 ----IISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTR 166
++S D ++ WD + + ++ H K K Y +FA
Sbjct: 393 NGKYLLSAQLDSSLKLWDPKKAKPLKYYNGH---------KNKKYCLFAN---------- 433
Query: 167 AVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLK 200
+ V ++ GS DG I VW T+Q+ +L+
Sbjct: 434 -MSVPLGKHIISGSEDGRILVWSIQTKQIVQILE 466
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 31/167 (18%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F + + S D T+++WD ++ + A S ++Y+ G T+ + +D
Sbjct: 302 CCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDG 361
Query: 59 KVRFWDFRAEEKVRDI--ELHGKITSLDLSKGTETKFAGS-----------SCNDLVTYD 105
+R WD + ++ + H +T + S + + L Y+
Sbjct: 362 CIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYN 421
Query: 106 G---------------AGTTIISGHFDKKVRFWDFRAEEKVRDIELH 137
G G IISG D ++ W + ++ V+ +E H
Sbjct: 422 GHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGH 468
>sp|Q640J6|WD82A_XENLA WD repeat-containing protein 82-A OS=Xenopus laevis GN=wdr82-a PE=2
SV=1
Length = 313
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 50 TIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLD-----LSKGTETKFAGSSCNDLVT 103
T IS DK +R WD R+ + L GK + S D + G ++ DL +
Sbjct: 121 TFISASLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMV--KLYDLRS 178
Query: 104 YDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELH---GKITSLDLSKGKYYFVFAEGFKV 160
+D +D+ + + + + I + G + +D KG F
Sbjct: 179 FDKGPFATFKMQYDRTCEWTSLKFSQDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNNS 238
Query: 161 QCDFTRAVFVVDDDYVAVGSIDGNIYVWDCNTEQVEAVLKDMH 203
+ A F D ++ +GS DG I+VW+C + AVL H
Sbjct: 239 KAVTLEASFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKH 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,002,594
Number of Sequences: 539616
Number of extensions: 3171873
Number of successful extensions: 15902
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 692
Number of HSP's that attempted gapping in prelim test: 10530
Number of HSP's gapped (non-prelim): 3816
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)