Your job contains 1 sequence.
>psy8891
MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV
RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKV
RFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRAVFVVDDDYVAVGS
IDGNIYVWDCNTEQVEAVLKDMH
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8891
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039705 - symbol:Atg16 species:7227 "Drosophila me... 311 1.5e-35 2
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 266 2.5e-29 2
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 265 1.1e-28 2
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 265 2.0e-28 2
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 256 6.4e-28 2
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 222 5.8e-25 2
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 212 7.7e-23 2
UNIPROTKB|F1SM42 - symbol:ATG16L1 "Uncharacterized protei... 205 3.3e-22 2
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 266 3.5e-22 1
DICTYBASE|DDB_G0275323 - symbol:tipD "autophagy protein 1... 189 7.4e-14 1
WB|WBGene00017178 - symbol:atg-16.1 species:6239 "Caenorh... 182 3.8e-13 1
WB|WBGene00019427 - symbol:atg-16.2 species:6239 "Caenorh... 173 3.1e-12 1
RGD|1311400 - symbol:Atg16l2 "autophagy related 16-like 2... 156 2.7e-10 1
MGI|MGI:1920933 - symbol:Atg16l2 "autophagy related 16-li... 154 4.4e-10 1
UNIPROTKB|Q8NAA4 - symbol:ATG16L2 "Autophagy-related prot... 152 7.1e-10 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 144 1.2e-09 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 136 7.4e-08 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 136 9.1e-08 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 114 3.0e-07 2
SGD|S000000909 - symbol:GLE2 "RNA export factor associate... 133 3.3e-07 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 89 9.0e-07 3
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 129 1.0e-06 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 129 1.1e-06 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 129 1.2e-06 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 129 1.2e-06 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 129 1.2e-06 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 129 1.2e-06 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 129 1.2e-06 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 100 1.2e-06 3
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 88 1.5e-06 3
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 128 1.6e-06 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 89 1.8e-06 3
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 89 1.8e-06 3
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 89 1.8e-06 3
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 89 1.8e-06 3
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 89 1.8e-06 3
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 89 1.8e-06 3
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 89 1.8e-06 3
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 89 1.8e-06 3
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 89 1.8e-06 3
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 89 1.8e-06 3
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 123 1.9e-06 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 110 2.4e-06 2
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 128 2.6e-06 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 110 2.7e-06 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 127 2.8e-06 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 127 2.8e-06 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 121 2.8e-06 2
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 127 3.5e-06 1
POMBASE|SPAC17D4.01 - symbol:pex7 "peroxin-7 (predicted)"... 119 4.0e-06 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 125 4.3e-06 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 124 5.5e-06 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 88 6.1e-06 3
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 109 7.8e-06 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 118 8.4e-06 2
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 104 8.6e-06 3
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 105 1.2e-05 3
UNIPROTKB|Q8IU52 - symbol:TUWD12 "POC1 centriolar protein... 122 1.2e-05 1
UNIPROTKB|E2RNA4 - symbol:WDR12 "Uncharacterized protein"... 123 1.3e-05 1
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 123 1.3e-05 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 123 1.3e-05 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 123 1.3e-05 1
CGD|CAL0001281 - symbol:orf19.1095 species:5476 "Candida ... 122 1.4e-05 1
UNIPROTKB|Q59QW3 - symbol:GLE2 "Likely WD40 repeat nuclea... 122 1.4e-05 1
UNIPROTKB|Q7ZZY7 - symbol:Rae1/Gle2 "Rae1/Gle2" species:8... 106 1.5e-05 2
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 124 1.5e-05 1
CGD|CAL0002491 - symbol:DIP2 species:5476 "Candida albica... 126 1.6e-05 1
UNIPROTKB|Q5A756 - symbol:DIP2 "Putative uncharacterized ... 126 1.6e-05 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 104 1.7e-05 3
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 104 1.7e-05 3
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 122 1.8e-05 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 121 1.8e-05 1
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 124 1.9e-05 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 122 2.0e-05 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 121 2.1e-05 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 121 2.1e-05 1
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 121 2.2e-05 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 105 2.3e-05 3
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 120 2.4e-05 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 120 2.4e-05 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 121 2.7e-05 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 116 2.8e-05 2
FB|FBgn0034646 - symbol:Rae1 "Rae1" species:7227 "Drosoph... 98 2.8e-05 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 120 2.9e-05 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 120 2.9e-05 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 100 2.9e-05 3
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 96 3.0e-05 2
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 120 3.2e-05 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 101 3.3e-05 3
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 121 3.6e-05 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 120 3.7e-05 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 115 3.8e-05 2
WB|WBGene00001679 - symbol:gpb-1 species:6239 "Caenorhabd... 118 3.9e-05 1
UNIPROTKB|H0YLU1 - symbol:GNB5 "Guanine nucleotide-bindin... 99 4.0e-05 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 118 4.0e-05 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 119 4.1e-05 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 101 4.2e-05 3
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 98 4.4e-05 3
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 100 4.5e-05 3
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 119 4.5e-05 1
WARNING: Descriptions of 68 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 311 (114.5 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 61/90 (67%), Positives = 72/90 (80%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
M AK++ +P KVV+GS DRTLKIWDLRS ETKFAGSSCNDLVT D G+TIISGH+D
Sbjct: 408 MAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYD 467
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSK 87
KK+RFWD R E++ D+ + KITSLDLSK
Sbjct: 468 KKIRFWDIRTEKQADDVLMPAKITSLDLSK 497
Score = 231 (86.4 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 63/155 (40%), Positives = 84/155 (54%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDL-----VTYDGAGTTIISGHFDKKVRF 62
+P V+SGS + D ST G+S ND D ++GH KV
Sbjct: 353 EPRAVLSGSSAGINSV-DFDSTGAYILGTS-NDYGARVWTVMDNRLRHTLTGH-SGKVMA 409
Query: 63 WDFRAEEKVRDIE-LHGKITSL-DLSKGT--ETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
+ +E ++ + H + + DL ETKFAGSSCNDLVT D G+TIISGH+DK
Sbjct: 410 AKY-VQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDK 468
Query: 119 KVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFV 153
K+RFWD R E++ D+ + KITSLDLSK Y +
Sbjct: 469 KIRFWDIRTEKQADDVLMPAKITSLDLSKDCNYLI 503
Score = 103 (41.3 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 140 ITSLDLSKGKYYFVFA-EGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
I LDL K + F E FK+ CDF R GS DG IY+W+ N +EA
Sbjct: 511 IKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWNVNGF-LEAT 569
Query: 199 LK 200
LK
Sbjct: 570 LK 571
Score = 82 (33.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/121 (26%), Positives = 50/121 (41%)
Query: 12 VVSGSCDRTLKIWDL--RSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFR 66
V +G DR +K+WD+ STE + +GSS + V +D G I+ D R W
Sbjct: 333 VATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWT-- 390
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
V D L +T G K + Y +++G D+ ++ WD R
Sbjct: 391 ----VMDNRLRHTLT------GHSGKVMAAK------YVQEPIKVVTGSHDRTLKIWDLR 434
Query: 127 A 127
+
Sbjct: 435 S 435
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 266 (98.7 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 57/105 (54%), Positives = 75/105 (71%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC---VMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLV 102
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+
Sbjct: 469 KKIRFWDIRSESVVREMELLGKITALDLNP-ERTELLSCSRDDLL 512
Score = 177 (67.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
+T FAGSSCND+V + ++SGHFDKK+RFWD R+E VR++EL GKIT+LDL+
Sbjct: 444 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIRSESVVREMELLGKITALDLN 497
Score = 91 (37.1 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 139 KITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
K+ L + K F A GFK D+TR GS +G++YVW T +VE V
Sbjct: 513 KVIDLRTNAVKQTFS-APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKV 571
Query: 199 LKDMH 203
L H
Sbjct: 572 LSKQH 576
Score = 69 (29.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
+ +G DR +K+W+ + +F GS ++ AG T I FD + A
Sbjct: 337 LATGGMDRRVKLWEAFGDKCEFKGS-----LSGSNAGITSIE--FDSAGAYL-LAASN-- 386
Query: 72 RDIELHGKITSLD--LSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+ +I ++D + T T +G + D A I+SG D+ ++ WD R++
Sbjct: 387 ---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLRSKV 441
Query: 130 KVRDI 134
++ +
Sbjct: 442 CIKTV 446
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 265 (98.3 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 57/105 (54%), Positives = 75/105 (71%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC---VMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLV 102
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+
Sbjct: 469 KKIRFWDIRSESIVREMELLGKITALDLNP-ERTELLSCSRDDLL 512
Score = 176 (67.0 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
+T FAGSSCND+V + ++SGHFDKK+RFWD R+E VR++EL GKIT+LDL+
Sbjct: 444 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIRSESIVREMELLGKITALDLN 497
Score = 86 (35.3 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 139 KITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
KI L ++ + F A GFK D+TR GS +G++Y+W + +VE V
Sbjct: 513 KIIDLRINAVRQTFS-APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKV 571
Query: 199 LKDMH 203
L H
Sbjct: 572 LSKQH 576
Score = 71 (30.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 29/125 (23%), Positives = 56/125 (44%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
+ +G DR +K+W++ + +F GS ++ AG T I FD + A
Sbjct: 337 LATGGMDRRVKLWEVFGDKCEFKGS-----LSGSNAGITSIE--FDSAGSYL-LAASN-- 386
Query: 72 RDIELHGKITSLD--LSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+ +I ++D + T T +G + D A I+SG D+ ++ WD R++
Sbjct: 387 ---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLRSKV 441
Query: 130 KVRDI 134
++ +
Sbjct: 442 CIKTV 446
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 265 (98.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 57/105 (54%), Positives = 75/105 (71%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 428 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC---VMSGHFD 484
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLV 102
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+
Sbjct: 485 KKIRFWDIRSESIVREMELLGKITALDLNP-ERTELLSCSRDDLL 528
Score = 176 (67.0 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
+T FAGSSCND+V + ++SGHFDKK+RFWD R+E VR++EL GKIT+LDL+
Sbjct: 460 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIRSESIVREMELLGKITALDLN 513
Score = 84 (34.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 139 KITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
KI L ++ + F A GFK D+TR G+ +G++Y+W+ + +VE V
Sbjct: 529 KIIDLRINAVRQTFS-APGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKV 587
Query: 199 LKDMH 203
L H
Sbjct: 588 LSKHH 592
Score = 71 (30.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/125 (23%), Positives = 56/125 (44%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
+ +G DR +K+W++ + +F GS ++ AG T I FD + A
Sbjct: 353 LATGGMDRRVKLWEVFGDKCEFKGS-----LSGSNAGITSIE--FDSAGSYL-LAASN-- 402
Query: 72 RDIELHGKITSLD--LSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+ +I ++D + T T +G + D A I+SG D+ ++ WD R++
Sbjct: 403 ---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLRSKV 457
Query: 130 KVRDI 134
++ +
Sbjct: 458 CIKTV 462
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 256 (95.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 55/106 (51%), Positives = 74/106 (69%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST----ETKFAGSSCNDLVTYDGAGTTIISGHF 56
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHF
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDIVCTEQC---VMSGHF 468
Query: 57 DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLV 102
DKK+RFWD R E V+++EL G+IT+LDL+ T+ S +DL+
Sbjct: 469 DKKIRFWDIRTESIVKELELLGRITALDLNS-ERTELLTCSRDDLL 513
Score = 170 (64.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
+T FAGSSCND+V + ++SGHFDKK+RFWD R E V+++EL G+IT+LDL+
Sbjct: 445 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIRTESIVKELELLGRITALDLN 498
Score = 88 (36.0 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 143 LDLSKGKYYFVF-AEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAVLKD 201
+DL G F A+GFK D+TR GS DG +YVW+ T ++E L
Sbjct: 516 IDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAK 575
Query: 202 MH 203
H
Sbjct: 576 HH 577
Score = 65 (27.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
+ +G DR +K+W++ G C + G+ I S FD + A
Sbjct: 337 LATGGMDRRVKLWEV-------LGDRCEPKGSLSGSNAGITSIEFDSAGSYL-LAASN-- 386
Query: 72 RDIELHGKITSLDLSK--GTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAE 128
+ +I ++D ++ T T +G + D A I+SG D+ ++ WD R++
Sbjct: 387 ---DFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLRSK 440
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 222 (83.2 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 53/140 (37%), Positives = 81/140 (57%)
Query: 12 VVSGSCDRTLKIWD-----LRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
+++ S D +IW LR T T +G + D A I+SG D+ ++ WD R
Sbjct: 362 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLR 419
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
++ +++ + + G +T FAGSSCND+V + ++SGHFDKK+RFWD R
Sbjct: 420 SKV-CEEMQSLCVLMTFAFLLGIKTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIR 475
Query: 127 AEEKVRDIELHGKITSLDLS 146
+E VR++EL GKIT+LDL+
Sbjct: 476 SESVVREMELLGKITALDLN 495
Score = 100 (40.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY 44
+ AKFL D ++VSGS DRTLK+WDLRS + S C L+T+
Sbjct: 393 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCV-LMTF 435
Score = 95 (38.5 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 25/65 (38%), Positives = 30/65 (46%)
Query: 139 KITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
KI L + K F A GFK D+TR GS DG++YVW T +VE V
Sbjct: 511 KIIDLRTNAIKQSFS-APGFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVLTGKVEKV 569
Query: 199 LKDMH 203
L H
Sbjct: 570 LSKQH 574
Score = 81 (33.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGS--SCNDLVT---YDGAGTTIISGHFDKKVRFWDFR 66
+ +G DR +K+W+ + +F GS N +T +D AG +++ D R W
Sbjct: 318 LATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWT-- 375
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
V D L +T K KF D A I+SG D+ ++ WD R
Sbjct: 376 ----VDDYRLRHTLTGHS-GKVLSAKFL---------LDNA--RIVSGSHDRTLKLWDLR 419
Query: 127 AE 128
++
Sbjct: 420 SK 421
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 212 (79.7 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 51/108 (47%), Positives = 69/108 (63%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST----ETKFAGSSCNDLVTYDGAGTTIISGHF 56
+ A+FL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHF
Sbjct: 407 LSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQC---VMSGHF 463
Query: 57 DKKVRFWDFRAEEKVRDIELHG--KITSLDLSKGTETKFAGSSCNDLV 102
DKKVRFWD + +L+ ++TSLDL+ T+ S +DLV
Sbjct: 464 DKKVRFWDISYQNYHIQKQLNKLCRVTSLDLNHD-RTELLTCSRDDLV 510
Score = 126 (49.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHG--KITSLDLS 146
+T FAGSSCND+V + ++SGHFDKKVRFWD + +L+ ++TSLDL+
Sbjct: 440 KTVFAGSSCNDIVCTEQC---VMSGHFDKKVRFWDISYQNYHIQKQLNKLCRVTSLDLN 495
Score = 85 (35.0 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 155 AEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAVLKDMH 203
A+GFK DFTR GS DG +Y+W+ T ++E L H
Sbjct: 526 AQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGH 574
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 205 (77.2 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 50/107 (46%), Positives = 67/107 (62%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC---VMSGHFD 468
Query: 58 KKVRFWDFRAEEK--VRDIELHGKITSLDLSKGTETKFAGSSCNDLV 102
KK+RFWD R + V +L GK T+ + T+ S +DL+
Sbjct: 469 KKIRFWDIRYNTRSLVSLGQLLGKQTASRFNP-ERTELLSCSRDDLL 514
Score = 119 (46.9 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
+T FAGSSCND+V + ++SGHFDKK+RFWD R
Sbjct: 444 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIR 477
Score = 86 (35.3 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 139 KITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAV 198
KI L ++ + F A GFK D+TR GS +G++YVW + +VE V
Sbjct: 515 KIIDLRINAVRQTFS-APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGKVEKV 573
Query: 199 LKDMH 203
L H
Sbjct: 574 LSKHH 578
Score = 71 (30.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/125 (23%), Positives = 56/125 (44%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
+ +G DR +K+W++ + +F GS ++ AG T I FD + A
Sbjct: 337 LATGGMDRRVKLWEVFGDKCEFKGS-----LSGSNAGITSIE--FDSAGSYL-LAASN-- 386
Query: 72 RDIELHGKITSLD--LSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
+ +I ++D + T T +G + D A I+SG D+ ++ WD R++
Sbjct: 387 ---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA--RIVSGSHDRTLKLWDLRSKV 441
Query: 130 KVRDI 134
++ +
Sbjct: 442 CIKTV 446
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 266 (98.7 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 60/119 (50%), Positives = 78/119 (65%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRST---ETKFAGSSCNDLVTYDGAGTTIISGHFD 57
+ AKFL D ++VSGS DRTLK+WDLRS +T FAGSSCND+V + ++SGHFD
Sbjct: 412 LSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC---VMSGHFD 468
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
KK+RFWD R+E VR++EL GKIT+LDL+ T+ S +DL+ T I F
Sbjct: 469 KKIRFWDIRSESIVREMELLGKITALDLNP-ERTELLSCSRDDLLKVIDLRTNAIKQTF 526
Score = 176 (67.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 90 ETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
+T FAGSSCND+V + ++SGHFDKK+RFWD R+E VR++EL GKIT+LDL+
Sbjct: 444 KTVFAGSSCNDIVCTEQC---VMSGHFDKKIRFWDIRSESIVREMELLGKITALDLN 497
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 189 (71.6 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 42/85 (49%), Positives = 55/85 (64%)
Query: 4 KFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKV 60
KF+ +VV+GS DRT+K+WDL+ T T F SSCNDLV G+GT + SGH D V
Sbjct: 415 KFINS-NRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSV 473
Query: 61 RFWDFRAEEKVRDIE-LH-GKITSL 83
RFWD A E + + +H G+ITS+
Sbjct: 474 RFWDSNAGEPTQVLSSIHEGQITSI 498
Score = 145 (56.1 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 77 HGKITSL-DLSKG--TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRD 133
H + L DL KG T T F SSCNDLV G+GT + SGH D VRFWD A E +
Sbjct: 427 HDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQV 486
Query: 134 IE-LH-GKITSL 143
+ +H G+ITS+
Sbjct: 487 LSSIHEGQITSI 498
Score = 60 (26.2 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C F + +G D+ +K+WD+ S + K G+S + + V++ +I+ D
Sbjct: 329 CMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDN 388
Query: 59 KVRFWDFRAEEKVRDIELH-GKI 80
R W+ + H GK+
Sbjct: 389 SARLWNTELGRSRHTLTGHIGKV 411
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTII-SGHFD 57
C KF + VSGS DR +KIWD+ R + + F S D+ T GA ++ SGHFD
Sbjct: 383 CVKFYQSHS-AVSGSADRVIKIWDIQNQRCSRSLFPASKVLDVATNMGASPSLFASGHFD 441
Query: 58 KKVRFWDFRAEEKVRDIELHGKITSLDLS-KGTE 90
KK+RF+D R+ + VR +++ G+ITSLD++ G E
Sbjct: 442 KKLRFYDGRSTDPVRTVDMGGRITSLDVTMSGCE 475
Score = 133 (51.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 52 ISGHFDKK--VRFWDFR-AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAG 108
+SGH D+ V+F+ A D + KI + + + + F S D+ T GA
Sbjct: 374 LSGHSDQVTCVKFYQSHSAVSGSADRVI--KIWDIQNQRCSRSLFPASKVLDVATNMGAS 431
Query: 109 TTII-SGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLS 146
++ SGHFDKK+RF+D R+ + VR +++ G+ITSLD++
Sbjct: 432 PSLFASGHFDKKLRFYDGRSTDPVRTVDMGGRITSLDVT 470
>WB|WBGene00019427 [details] [associations]
symbol:atg-16.2 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00700000104505
HOGENOM:HOG000016928 InterPro:IPR020472 PRINTS:PR00320
EMBL:FO081583 PIR:T34332 RefSeq:NP_495299.2
ProteinModelPortal:Q09406 SMR:Q09406 DIP:DIP-27464N
MINT:MINT-1077081 PaxDb:Q09406 EnsemblMetazoa:K06A1.5.1
EnsemblMetazoa:K06A1.5.2 GeneID:174067 KEGG:cel:CELE_K06A1.5
CTD:174067 WormBase:K06A1.5 InParanoid:Q09406 OMA:IWNTKTT
NextBio:882359 GO:GO:0006914 GO:GO:0071688 Uniprot:Q09406
Length = 534
Score = 173 (66.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 12 VVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAG-TTIISGHFDKKVRFWDFRA 67
V+SGS DRT+K WD+ R ++ GS+ D+V G ++ IS HFDKKVRFWD R+
Sbjct: 346 VISGSADRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARS 405
Query: 68 EEKVRDIELHGKITSLDLS 86
+ +EL K++SLD+S
Sbjct: 406 SDATYSVELGQKVSSLDIS 424
Score = 169 (64.5 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 57/213 (26%), Positives = 93/213 (43%)
Query: 13 VSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGA--GTTIISGHFDKKVRFWDFRAEEK 70
++ S D+T ++W++ S S D V+ +ISG D+ ++ WD
Sbjct: 306 LASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQSHNVISGSADRTIKNWD------ 359
Query: 71 VRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAG-TTIISGHFDKKVRFWDFRAEE 129
I+S+ K + GS+ D+V G ++ IS HFDKKVRFWD R+ +
Sbjct: 360 ---------ISSIRCLK---SYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARSSD 407
Query: 130 KVRDIELHGKITSLDLSK----------------------GKYYFVFAEGFKVQCDFTRX 167
+EL K++SLD+S G + AE +K CD TR
Sbjct: 408 ATYSVELGQKVSSLDISMDGLQVLASSRDDTLSLIDVRNYGIIHLYSAEQYKTSCDSTRA 467
Query: 168 XXXXXXXXXXXGSIDGNIYVWDCNTEQVEAVLK 200
GS + ++++W+ T ++E V+K
Sbjct: 468 IFSSTGEYVLAGSSNSSVFIWNTKTTKLEKVVK 500
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/87 (45%), Positives = 54/87 (62%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDL-RS--TETKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
AKF + V+GS DRT+K WDL R+ + T S CND+V D IISGH D+K
Sbjct: 432 AKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHI---IISGHNDQK 488
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLS 86
+RFWD R ++ I + G++TSL+LS
Sbjct: 489 IRFWDSRGPHCIQVIPVQGRVTSLNLS 515
Score = 120 (47.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 52 ISGHFDK----KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGA 107
+SGH DK K + +A RD + K L + + T S CND+V D
Sbjct: 422 LSGHKDKVTAAKFKLTRHQAVTGSRDRTV--KEWDLGRAYCSRTINVLSYCNDVVCGDHI 479
Query: 108 GTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFV 153
IISGH D+K+RFWD R ++ I + G++TSL+LS + + +
Sbjct: 480 ---IISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLNLSHDQLHLL 522
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 154 (59.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 40/87 (45%), Positives = 53/87 (60%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDL-RS--TETKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
AKF + V+GS DRT+K WDL R+ + T S CND+V D IISGH D+K
Sbjct: 432 AKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHI---IISGHNDQK 488
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLS 86
+RFWD R ++ I + G++TSL LS
Sbjct: 489 IRFWDSRGPHCIQVIPVQGRVTSLHLS 515
Score = 120 (47.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 50/207 (24%), Positives = 86/207 (41%)
Query: 8 DPT--KVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTT---IISGHFDKKVRF 62
DP+ +V++ + ++ ++W + T++K S D VT T ++G D+ V+
Sbjct: 393 DPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 452
Query: 63 WDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS-----GHFD 117
WD R I + D+ G +G + + +D G I G
Sbjct: 453 WDLGRAYCSRTINVLSYCN--DVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVT 510
Query: 118 KKVRFWD-FRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXX 176
+D RD L K+ L +S + F A+GFK D+T+
Sbjct: 511 SLHLSYDQLHLLSCSRDNTL--KVIDLRISNIRQVFR-ADGFKCSSDWTKAVFSPDRSYA 567
Query: 177 XXGSIDGNIYVWDCNTEQVEAVLKDMH 203
GS +G++Y+WD NT ++E L+ H
Sbjct: 568 LAGSSNGDLYIWDVNTGKLETSLQGPH 594
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 152 (58.6 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 3 AKFLGDPTKVVSGSCDRTLKIWDL-RS--TETKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
AKF + V+GS DRT+K WDL R+ + T S CND+V D IISGH D+K
Sbjct: 428 AKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHI---IISGHNDQK 484
Query: 60 VRFWDFRAEEKVRDIELHGKITSLDLS 86
+RFWD R + I + G++TSL LS
Sbjct: 485 IRFWDSRGPHCTQVIPVQGRVTSLSLS 511
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 52 ISGHFDK----KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGA 107
+SGH DK K + +A RD + K L + + T S CND+V D
Sbjct: 418 LSGHKDKVTAAKFKLTRHQAVTGSRDRTV--KEWDLGRAYCSRTINVLSYCNDVVCGDHI 475
Query: 108 GTTIISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFV 153
IISGH D+K+RFWD R + I + G++TSL LS + + +
Sbjct: 476 ---IISGHNDQKIRFWDSRGPHCTQVIPVQGRVTSLSLSHDQLHLL 518
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/193 (24%), Positives = 80/193 (41%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D TK S D+ +++WD+ + + + G + + Y+ + + SG FD KVR WD
Sbjct: 67 DSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
Query: 65 FRAEE--KVRDI-ELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
R+ ++ + + ++S+D+++ GS+ L TYD T+ S +F +
Sbjct: 127 CRSNSFSPIQVLADAKDSVSSIDIAE--HLIVTGSTDGTLRTYDIRKGTLSSDYFSHPIT 184
Query: 122 FWDFRAEEKVRDIE-LHGKITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGS 180
I L+ I LD GK + G K R GS
Sbjct: 185 SVKTSKSASFSLISSLNSSIHLLDQETGKILKSYI-GLKNMEYRVRSSFNQSETIVFSGS 243
Query: 181 IDGNIYVWDCNTE 193
DG +Y+WD E
Sbjct: 244 EDGKVYLWDLENE 256
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 136 (52.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 46/198 (23%), Positives = 88/198 (44%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVRFWD 64
D +++VS S D+TLK+WD+RS + +D V ++ I+SG FD+ V+ W+
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 65 FRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGA-GTTI--ISGHFDKKV 120
+ + ++ + H I++++ + +GS +D A G + ++ + V
Sbjct: 152 VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D S+G+ + G K + C F
Sbjct: 212 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCLFA-SFSVTGRKWVV 269
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 270 SGSEDNMVYIWNLQTKEI 287
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 136 (52.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 52/198 (26%), Positives = 81/198 (40%)
Query: 8 DPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VSGS D+TLK+W+L +S +T S+ ++ I+SG FD+ VR WD
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
R + ++ + H S + SS + L +D A + D V
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 303
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ +++V
Sbjct: 304 -GSEDNMVYIWNLQSKEV 320
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 114 (45.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/95 (31%), Positives = 43/95 (45%)
Query: 14 SGSCDRTLKIWDLRSTETKFAGSSCNDL--VTYDGAGTTIISGHFDKKVRFWDFRAEEKV 71
SGS DRT+KIWD R S + V + G +ISG D +V+ WD R + +
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVL 217
Query: 72 RDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD 105
+ H IT + LS + + N L +D
Sbjct: 218 HHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Score = 95 (38.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCNDLVTYDGA--GTTII-SGH 55
M A F D + + + S D+TL WD+ + + +F G N + + G+ G ++ SG
Sbjct: 102 MEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHG-NFVNSVQGSRRGQQLLCSGS 160
Query: 56 FDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS-- 113
D+ ++ WD R + +E ++T++ E +G N++ +D ++
Sbjct: 161 DDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHL 220
Query: 114 -GHFD 117
GH D
Sbjct: 221 RGHSD 225
Score = 58 (25.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 179 GSIDGNIYVWDCNTEQV 195
GS D ++Y+WD NT ++
Sbjct: 292 GSADRHVYIWDVNTRRI 308
>SGD|S000000909 [details] [associations]
symbol:GLE2 "RNA export factor associated with the nuclear
pore complex (NPC)" species:4932 "Saccharomyces cerevisiae"
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0000973 "posttranscriptional
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0000972 "transcription-dependent tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IMP] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000909 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
GO:GO:0031965 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:BK006939 EMBL:U18839
GeneTree:ENSGT00530000063440 TCDB:9.A.14.1.1 GO:GO:0016973
EMBL:AY692884 PIR:S50610 RefSeq:NP_011033.3 RefSeq:NP_011037.3
ProteinModelPortal:P40066 SMR:P40066 DIP:DIP-2452N IntAct:P40066
MINT:MINT-483363 STRING:P40066 PaxDb:P40066 PeptideAtlas:P40066
EnsemblFungi:YER107C GeneID:856844 GeneID:856848 KEGG:sce:YER107C
KEGG:sce:YER112W CYGD:YER107c HOGENOM:HOG000208823 KO:K12623
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 NextBio:983165
Genevestigator:P40066 GermOnline:YER107C GO:GO:0031081
GO:GO:0000973 GO:GO:2000728 Uniprot:P40066
Length = 365
Score = 133 (51.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 27/90 (30%), Positives = 52/90 (57%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAG--SSCNDLVTYDGAGTT----IISG 54
+C ++ D TKV SG CD LK++D+ S +T+ G S+ ++ + G + I++G
Sbjct: 84 LCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTG 143
Query: 55 HFDKKVRFWDFRAEEKVRDIELHGKITSLD 84
+DK +++WD R + V + + ++ S+D
Sbjct: 144 SWDKTIKYWDMRQPQPVSTVMMPERVYSMD 173
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 89 (36.4 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 116
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 117 FECIRTMHGH 126
Score = 72 (30.4 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 279 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 331
Score = 63 (27.2 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 12 VVSGSCDRTLKIWDLRSTET--KFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAE 68
+ S S D T+K+WD + E G N V G I+S DK ++ W+ +
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 159
Query: 69 EKVRDIELH 77
V+ H
Sbjct: 160 YCVKTFTGH 168
Score = 44 (20.5 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 333 GSVDQTVKVWEC 344
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 129 (50.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 191
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 192 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 250
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 251 -GSEDNLVYIWNLQTKEI 267
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/201 (22%), Positives = 85/201 (42%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 61
F D +VS S D+TLK+WD+ + +T ++ V ++ I+SG FD+ VR
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 62 FWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGT-----TIISGH 115
WD + ++ + H +T++D ++ SS + L +GT T+I
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSL-IVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Query: 116 FDKKVRFWDFRAEEKVRDI-ELHGKITSLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXX 174
+ V F F K + L + ++S K+ + Q +
Sbjct: 198 -NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGK 256
Query: 175 XXXXGSIDGNIYVWDCNTEQV 195
GS D +++W+ N++++
Sbjct: 257 RIVSGSEDNCVHMWELNSKKL 277
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 277 -GSEDNLVYIWNLQTKEI 293
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 277 -GSEDNLVYIWNLQTKEI 293
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 277 -GSEDNLVYIWNLQTKEI 293
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 277 -GSEDNLVYIWNLQTKEI 293
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 129 (50.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/198 (25%), Positives = 79/198 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + G K + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T+++
Sbjct: 277 -GSEDNLVYIWNLQTKEI 293
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 100 (40.3 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 12 VVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAE 68
++SGS D+T+K+WD+ + T + V + G I+S DK +R WDF+ +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 69 EKVRDIELHGK-ITSLDLSKGTETKFAGS 96
++ + H +TSLD K GS
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 75 (31.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WDF+ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 63 (27.2 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 12 VVSGSCDRTLKIWDLRSTET--KFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAE 68
+ S S D T+K+WD + E G N V G I+S DK ++ W+ +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 69 EKVRDIELH 77
V+ H
Sbjct: 225 YCVKTFTGH 233
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 88 (36.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQD-ISFDQTGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 74 (31.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G ++S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVV 396
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/192 (25%), Positives = 76/192 (39%)
Query: 14 SGSCDRTLKIWDLRSTET--KFAGSSCNDL--VTYDGAGTTIISGHFDKKVRFWDFRAEE 69
S S D TL+IWD RS K N + V ++ I+SG FD+ +R W+ + +
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 70 KVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK---VRFWDF 125
VR I+ H I+S+ ++ + S +D T + D K V F F
Sbjct: 162 CVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKF 221
Query: 126 RAEEK-VRDIELHGKITSLDLSKGKYYFVFA-EGFKVQCDFTRXXXXXXXXXXXXGSIDG 183
K + L + + + GK+ V+ KV C T GS D
Sbjct: 222 SPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC-ITSAFSVTNGKYIVSGSEDN 280
Query: 184 NIYVWDCNTEQV 195
+Y+WD +
Sbjct: 281 CVYLWDLQARNI 292
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVED-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D +G + S D ++ WDF+
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQD-ISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
V + G I+S DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 123 (48.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDL-VTYDGAGTTIISGHFD 57
+C F T V +GS D T K+WD++S E G + +++D +G II+G FD
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFD 240
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDG-AGTTI--IS 113
V WD KV + H +I+S S GS + +D +G + ++
Sbjct: 241 HTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300
Query: 114 GHFDK 118
GH D+
Sbjct: 301 GHDDE 305
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
GS D +WD T Q VL+
Sbjct: 363 GSSDKTARIWDVQTGQCLQVLE 384
Score = 36 (17.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 108 GTTIISGHFDKKVRFW 123
G +I+G D R W
Sbjct: 399 GNIVITGSKDNSCRIW 414
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 110 (43.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 12 VVSGSCDRTLKIWDLRS---TETKFAGS-SCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D+T+K+W++++ +T F G +V + GT I S D+ VR W
Sbjct: 36 IVSASRDKTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 94
Query: 68 EEKVRDIELHGKITSLDLSKGTETKFA------GSSC-NDL----VTYDGAGTTIISGHF 116
+E ++ H + +S E+ ++ GS +D V + G I+S
Sbjct: 95 KECKAELREHEHVVEC-ISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCAD 153
Query: 117 DKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 154 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 191
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 193 GSVDQTVKVWEC 204
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 128 (50.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+K+WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIKVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHE---QQLISGSLDNMVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 110 (43.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 12 VVSGSCDRTLKIWDLRS---TETKFAGS-SCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D+T+K+W++++ +T F G +V + GT I S D+ VR W
Sbjct: 39 IVSASRDKTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 97
Query: 68 EEKVRDIELHGKITSLDLSKGTETKFA------GSSC-NDL----VTYDGAGTTIISGHF 116
+E ++ H + +S E+ ++ GS +D V + G I+S
Sbjct: 98 KECKAELREHEHVVEC-ISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCAD 156
Query: 117 DKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
DK +R WD++ + ++ + H +TSLD K Y V
Sbjct: 157 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 194
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 196 GSVDQTVKVWEC 207
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 127 (49.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/203 (26%), Positives = 82/203 (40%)
Query: 8 DPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D VVS S D+TLKI+++ R T+T ++ ++ + ++SG FD+ VR WD
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ ++ + H S + A S + LV +D A I D + V
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPV 259
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFA--EGFKVQCDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + E K C F
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGGKWIIS 318
Query: 178 XGSIDGNIYVWDCNTEQVEAVLK 200
GS D IY+W+ T ++ L+
Sbjct: 319 -GSEDCKIYIWNLQTREIVQCLE 340
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 127 (49.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/203 (26%), Positives = 82/203 (40%)
Query: 8 DPTKVVSGSCDRTLKIWDL---RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D VVS S D+TLKI+++ R T+T ++ ++ + ++SG FD+ VR WD
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ ++ + H S + A S + LV +D A I D + V
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPV 259
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFA--EGFKVQCDFTRXXXXXXXXXXX 177
F F K + L + D SKGK + E K C F
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGGKWIIS 318
Query: 178 XGSIDGNIYVWDCNTEQVEAVLK 200
GS D IY+W+ T ++ L+
Sbjct: 319 -GSEDCKIYIWNLQTREIVQCLE 340
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 121 (47.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFA--GSSCNDL-VTYDGAGTTIISGHFD 57
+C F T V +GS D T K+WD++S E F G S + ++++ +G II+G FD
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIIS 113
V W+ KV + H +I+S + GS +C +G ++
Sbjct: 241 HTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300
Query: 114 GHFDK 118
GH D+
Sbjct: 301 GHDDE 305
Score = 41 (19.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
GS D +WD T Q VL+
Sbjct: 363 GSSDKTARIWDAQTGQCLQVLE 384
Score = 35 (17.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 108 GTTIISGHFDKKVRFW 123
G II+G D R W
Sbjct: 399 GDIIITGSKDNTCRIW 414
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 127 (49.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D +V S S D T+++WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T+D +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHD---QQLISGSLDNMVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>POMBASE|SPAC17D4.01 [details] [associations]
symbol:pex7 "peroxin-7 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000268 "peroxisome targeting
sequence binding" evidence=ISO] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC17D4.01 GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005782 GO:GO:0016558 GO:GO:0000268
GO:GO:0006625 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR
GO:GO:0005053 PANTHER:PTHR22850:SF4 EMBL:D89147 PIR:T42423
PIR:T50123 RefSeq:XP_001713109.1 ProteinModelPortal:P78798
STRING:P78798 EnsemblFungi:SPAC17D4.01.1 GeneID:5802962
KEGG:spo:SPAC17D4.01 eggNOG:NOG320380 OrthoDB:EOG46X2JK
NextBio:20892270 Uniprot:P78798
Length = 308
Score = 119 (46.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 12 VVSGSCDRTLKIW--DL-RSTETKFAGSSCNDLVTYDGAGTTIISGHF--DKKVRFWDFR 66
VV+GS D T+K+W +L S +T GS+ L + + G+ D +FWDFR
Sbjct: 119 VVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFR 178
Query: 67 AEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLV-TYDGAGT----TIISGH 115
+ +K IE+ +IT ++ SK + N+LV YD A +++SGH
Sbjct: 179 SSDKFMSIEIPNQITCMNWSKSNHRMVYTADNNNLVYCYDIANLKTPLSVLSGH 232
Score = 38 (18.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 105 DGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLS 146
+ A + + +D R +D +R ++LH + + +D S
Sbjct: 243 NSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWS 285
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 125 (49.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 50/197 (25%), Positives = 77/197 (39%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D +VS S D+TLKIWD+ S +T S+ ++ I+SG FD+ VR WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 65 FRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVT-YDGAGTTIISGHFDKK---V 120
+ + ++ + H S + SS + L +D A + D V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFA-EGFKVQCDFTRXXXXXXXXXXXX 178
F F K + L + D SKGK + + C F
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS- 276
Query: 179 GSIDGNIYVWDCNTEQV 195
GS D +Y+W+ T++V
Sbjct: 277 GSEDNLVYIWNLQTKEV 293
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 124 (48.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 35/108 (32%), Positives = 48/108 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD 105
V+ WD R V+ +LH + +L SS + L D
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 88 (36.0 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 12 VVSGSCDRTLKIWDLRST--ETKFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T+K+WD + E G S D +++D G + S D ++ WDF+
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQD-ISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 68 EEKVRDIELH 77
E +R + H
Sbjct: 182 FECIRTMHGH 191
Score = 68 (29.0 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 108 GTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLSKGKYYFV 153
G I+S DK +R WD++ + + + H +TSLD K Y V
Sbjct: 350 GKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVV 396
Score = 44 (20.5 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 398 GSVDQTVKVWEC 409
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 109 (43.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDLVTYDGAGTTIISGHFDKK 59
C +F D TK++SGS DRT+K+W+ R+ E + + G + + A + + SG DK
Sbjct: 394 CLQF--DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDA-SILASGSVDKT 450
Query: 60 VRFWDFRAEEKVRDIELHGK---ITSLDLSKGTETKFAGS 96
V+ W+F E+K L G + ++ + + T F+ S
Sbjct: 451 VKIWNF--EDK-STFSLRGHTDWVNAVRVDTSSRTVFSAS 487
Score = 94 (38.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET-KFAG-SSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D + + SGS D+T+KIW+ T G + + V D + T+ S D VR WD
Sbjct: 438 DASILASGSVDKTVKIWNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDL 497
Query: 66 RAEEKVRDIELH-GKITSL-DLSKGTETKFAGSSC--NDLVTYDG 106
+ +R H G++ + L + E + + C +DL T G
Sbjct: 498 DTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSG 542
Score = 94 (38.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 31/124 (25%), Positives = 53/124 (42%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWD------LRSTETKFAGSSCNDLVTYDGAGTTIISG 54
MC +F + + +GS D T+KIWD LR+ +G C + +D T +ISG
Sbjct: 353 MCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRC---LQFDD--TKLISG 405
Query: 55 HFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
D+ ++ W++R E + H G + L + + ++ T +
Sbjct: 406 SMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFEDKSTFSLR 465
Query: 114 GHFD 117
GH D
Sbjct: 466 GHTD 469
Score = 59 (25.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 106 GAGTT-IISGHFDKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGKY 150
GA T I+SG D+ ++ WD R + R H G +T + L ++
Sbjct: 616 GADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSRF 662
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 118 (46.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFA--GSSCNDL-VTYDGAGTTIISGHFD 57
+C F T V +GS D T K+WD+++ E + G S + ++++ +G II+G FD
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIIS 113
V WD KV + H +I+S + GS +C +G ++
Sbjct: 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT 300
Query: 114 GHFDK 118
GH D+
Sbjct: 301 GHDDE 305
Score = 41 (19.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 179 GSIDGNIYVWDCNTEQVEAVLK 200
GS D +WD T Q VL+
Sbjct: 363 GSSDKTARIWDAQTGQCLQVLE 384
Score = 35 (17.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 108 GTTIISGHFDKKVRFW 123
G +I+G D R W
Sbjct: 399 GNIVITGSKDNTCRIW 414
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 104 (41.7 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 209 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 264
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD A E + + +H L L S + +D A T I+
Sbjct: 265 TVRVWDVNAGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 318
Score = 52 (23.4 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 380 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 409
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 420 IVSGAYDGKIKVWDLMA 436
Score = 41 (19.5 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 423 GAYDGKIKVWD 433
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 105 (42.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 308 CLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 363
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD A E + + +H L L S + +D A T I+
Sbjct: 364 TVRVWDVNAGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 417
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 519 IVSGAYDGKIKVWDLVA 535
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 522 GAYDGKIKVWD 532
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/160 (25%), Positives = 74/160 (46%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ +GT I S D+
Sbjct: 19 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 78
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R + ++ ++H G +C +++ +G +I+ D
Sbjct: 79 TVKVWDVRVNKLLQHYQVHS---------------GGVNC---ISFHPSGNYLITASSDG 120
Query: 119 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFVFAEG 157
++ D + ++ H G + ++ SKG +FA G
Sbjct: 121 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE--LFASG 158
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+++WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSLKWSPTHE---QQLISGSLDNIVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+++WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHE---QQLISGSLDNIVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D +KIWD+ + K AG+ + ++Y + SG D+ +R WD
Sbjct: 267 DVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNCISYSPLSQRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R+ +D L + SL G T S ++ ++SG DK V+ WD
Sbjct: 327 RS----KDGSL--VLCSLTSHTGWVTSVKWSPSHE--------QQLVSGSLDKLVKLWDT 372
Query: 126 RA-EEKVRDIELHG-KITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHSDKVLSVD 393
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+++WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHE---QQLISGSLDNIVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>CGD|CAL0001281 [details] [associations]
symbol:orf19.1095 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IEA] [GO:0016973 "poly(A)+
mRNA export from nucleus" evidence=IEA] [GO:0010389 "regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IEA] [GO:0000973 "posttranscriptional tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0001281 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000168
EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1 RefSeq:XP_712107.1
ProteinModelPortal:Q59QW3 STRING:Q59QW3 GeneID:3646293
GeneID:3646319 KEGG:cal:CaO19.1095 KEGG:cal:CaO19.8697
Uniprot:Q59QW3
Length = 383
Score = 122 (48.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGS--SCNDLVTYDGAGTT----IISGHFDKKVR 61
D TK++SG D +KI+DL + + + G S V Y G T I SG +DK ++
Sbjct: 92 DGTKIISGGADNQVKIFDLATQQAQQIGQHDSAVKSVRYVECGPTNTQVIASGSWDKTLK 151
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSK 87
+WD R+ + V I L ++ S+D S+
Sbjct: 152 YWDMRSPQPVSTINLPERVYSMDNSQ 177
>UNIPROTKB|Q59QW3 [details] [associations]
symbol:GLE2 "Likely WD40 repeat nuclear pore protein Gle2p"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001281 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000168 EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1
RefSeq:XP_712107.1 ProteinModelPortal:Q59QW3 STRING:Q59QW3
GeneID:3646293 GeneID:3646319 KEGG:cal:CaO19.1095
KEGG:cal:CaO19.8697 Uniprot:Q59QW3
Length = 383
Score = 122 (48.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGS--SCNDLVTYDGAGTT----IISGHFDKKVR 61
D TK++SG D +KI+DL + + + G S V Y G T I SG +DK ++
Sbjct: 92 DGTKIISGGADNQVKIFDLATQQAQQIGQHDSAVKSVRYVECGPTNTQVIASGSWDKTLK 151
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSK 87
+WD R+ + V I L ++ S+D S+
Sbjct: 152 YWDMRSPQPVSTINLPERVYSMDNSQ 177
>UNIPROTKB|Q7ZZY7 [details] [associations]
symbol:Rae1/Gle2 "Rae1/Gle2" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0008017
"microtubule binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 HOVERGEN:HBG002942 EMBL:BC077196
EMBL:AY256464 RefSeq:NP_001083956.1 UniGene:Xl.56581 IntAct:Q7ZZY7
GeneID:399210 KEGG:xla:399210 CTD:399210 Uniprot:Q7ZZY7
Length = 368
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAG----TTIISGHFDKKVRFW 63
D TKV + SCD+T K+WDL S ++ + T + I++G +DK ++FW
Sbjct: 97 DGTKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKTLKFW 156
Query: 64 DFRAEEKVRDIEL 76
D R+ + I+L
Sbjct: 157 DTRSPNPLLSIQL 169
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 86 SKGTETKFAGS--SCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIE-LHGKITS 142
S GT T + ND+ + GT G D + FWD A K++ E L IT+
Sbjct: 262 SNGTNTAAPQDIYAVNDIAFHPVHGTLATVGS-DGRFSFWDKDARTKLKTSEQLDQPITA 320
Query: 143 LDLSKGKYYFVFAEGF 158
+ F ++ +
Sbjct: 321 CCFNHNGNIFAYSSSY 336
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDGA--GTTIISGHFDKKVRFW 63
D + + +GS D ++IWDLRS F G S +++ D + G + S D V W
Sbjct: 441 DGSLLATGSQDGLVRIWDLRSGRPILYFQGHS-KQVISVDWSPNGYQLASSSEDNTVVIW 499
Query: 64 DFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 123
D R +E+ I H I S + T+ ++ N + G + + FD K++ W
Sbjct: 500 DIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNN---SSPGCVNYLATCSFDGKIKTW 556
Query: 124 DFRAEEKVRDIELHG-KITSLDLSKGK 149
+ E H K+TS+DL+ K
Sbjct: 557 SPNTWSPLATFEGHSSKVTSIDLTNSK 583
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 12 VVSGSCDRTLKIWDLRSTET--KFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+ +G D ++KIWD+ S F G SS L +D GT ++SG D + WD
Sbjct: 94 IAAGYTDGSIKIWDISSNSVIINFEGHNSSITQL-KFDKNGTRLVSGSSDSSIIMWDLIG 152
Query: 68 EEKVRDIELH-GKITSLDL-SKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
E + ++ H G IT L+L S+ T+ G + +D+ D ++S D ++ W+
Sbjct: 153 EVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDV---DDMDDYLVSVSKDGLIKLWEL 209
Query: 126 RAEE 129
++++
Sbjct: 210 KSQQ 213
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 12 VVSGSCDRTLKIWDLRSTET--KFAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+ +G D ++KIWD+ S F G SS L +D GT ++SG D + WD
Sbjct: 94 IAAGYTDGSIKIWDISSNSVIINFEGHNSSITQL-KFDKNGTRLVSGSSDSSIIMWDLIG 152
Query: 68 EEKVRDIELH-GKITSLDL-SKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
E + ++ H G IT L+L S+ T+ G + +D+ D ++S D ++ W+
Sbjct: 153 EVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDV---DDMDDYLVSVSKDGLIKLWEL 209
Query: 126 RAEE 129
++++
Sbjct: 210 KSQQ 213
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 104 (41.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 308 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 363
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD A E + + +H L L S + +D A T I+
Sbjct: 364 TVRVWDVNAGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 417
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Score = 51 (23.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 519 IVSGAYDGKIKVWDLMA 535
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 522 GAYDGKIKVWD 532
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 104 (41.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 308 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 363
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD A E + + +H L L S + +D A T I+
Sbjct: 364 TVRVWDVNAGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 417
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Score = 51 (23.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 519 IVSGAYDGKIKVWDLMA 535
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 522 GAYDGKIKVWD 532
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/160 (25%), Positives = 74/160 (46%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ +GT I S D+
Sbjct: 107 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 166
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R + ++ ++H G +C +++ +G +I+ D
Sbjct: 167 TVKVWDVRVNKLLQHYQVHS---------------GGVNC---ISFHPSGNYLITASSDG 208
Query: 119 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFVFAEG 157
++ D + ++ H G + ++ SKG +FA G
Sbjct: 209 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE--LFASG 246
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171
Query: 59 KVRFWDFRAEEKVRDIELH 77
V+ WD R ++ +LH
Sbjct: 172 TVKVWDVRTHRLLQHYQLH 190
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/123 (31%), Positives = 59/123 (47%)
Query: 7 GDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY---DGAGTTIISGHFDKKVRFW 63
GD K+VSGS DRT++IWDLR+ + S + + T G G I +G D+ VR W
Sbjct: 497 GD--KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 554
Query: 64 DFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 123
D E + LD + T S + + T DG +++SG D+ V+ W
Sbjct: 555 DS---------ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLW 603
Query: 124 DFR 126
+ +
Sbjct: 604 NLQ 606
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/160 (25%), Positives = 74/160 (46%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ +GT I S D+
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R + ++ ++H G +C +++ +G +I+ D
Sbjct: 209 TVKVWDVRVNKLLQHYQVHS---------------GGVNC---ISFHPSGNYLITASSDG 250
Query: 119 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYFVFAEG 157
++ D + ++ H G + ++ SKG +FA G
Sbjct: 251 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE--LFASG 288
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELH 77
V+ WD R ++ +LH
Sbjct: 210 TVKVWDVRTHRLLQHYQLH 228
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELH 77
V+ WD R ++ +LH
Sbjct: 210 TVKVWDVRTHRLLQHYQLH 228
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 121 (47.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+++WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHE---QQLISGSLDNIVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 105 (42.0 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 14 SGSCDRTLKIWDLRSTETKFA-GSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVR 72
SGS D+T+K+WDL++ E K+ S + T +G + SG DK ++ WD +
Sbjct: 557 SGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNY 616
Query: 73 DIELHGK-ITSLDLSKGTETKFAGS 96
++ H K +T++ + GT ++GS
Sbjct: 617 TLKGHTKWVTTICIL-GTNL-YSGS 639
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 108 GTTIISGHFDKKVRFWDFRAEE 129
GT + SG +DK +R W+ ++ E
Sbjct: 632 GTNLYSGSYDKTIRVWNLKSLE 653
Score = 35 (17.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 180 SIDGNIYVWDCNTEQVEAVLK 200
S D I +WD T + L+
Sbjct: 679 SDDNTIKIWDLETLRCNTTLE 699
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT + + D
Sbjct: 181 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN 240
Query: 59 KVRFWDFRAEEKVRDIELH 77
V+ WD R ++ +LH
Sbjct: 241 TVKVWDVRTHRLLQHYQLH 259
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 48/198 (24%), Positives = 82/198 (41%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTE-TKFAGSSCNDLV--TYDGAGTTIISGHFDKKVRFWD 64
D +V+ S D+TLKI+++ + + K N + ++ + ++SG FD+ VR WD
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Query: 65 FRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK---V 120
R V+ + H ++++ ++ +GS + +D A + D + V
Sbjct: 192 VRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPV 251
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFA--EGFKVQCDFTRXXXXXXXXXXX 177
F F K + L + D KGK + E K C F
Sbjct: 252 AFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKY-CIFANFSVTGGKWIIS 310
Query: 178 XGSIDGNIYVWDCNTEQV 195
GS D IYVW+ T++V
Sbjct: 311 -GSEDCKIYVWNLQTKEV 327
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRS---TETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C F + VVSGS D +++IWD+R+ +T A S V+++ G+ I SG +D
Sbjct: 168 CCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDG 227
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
VR WD + V+ T +D + F S N G I+S + D
Sbjct: 228 LVRIWDTANGQCVK--------TLVD-DENPPVAFVKFSPN--------GKYILSSNLDN 270
Query: 119 KVRFWDFRAEEKVRDIELH 137
++ WDF + ++ + H
Sbjct: 271 TLKLWDFGKGKTLKQYQGH 289
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 121 (47.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ GT I S D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 208
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDK 118
V+ WD R + ++ ++H G +C V++ +G II+ D
Sbjct: 209 TVKIWDIRVNKLLQHYQVHS---------------GGVNC---VSFHPSGNYIITASSDG 250
Query: 119 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYF 152
++ D + ++ H G + ++ SKG F
Sbjct: 251 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 116 (45.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 50/199 (25%), Positives = 93/199 (46%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDL-VTYDGAGTTIISGHFDK 58
C +F D K++SGS D+T++IW+ R++E + G + + L +T+D T ++SG D
Sbjct: 318 CLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDS--TLLVSGSADC 373
Query: 59 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTII---SG 114
V+ W F +++ + H G + S+ + + +GS + + + T + S
Sbjct: 374 TVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA 432
Query: 115 HFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGK-YYFVFA--EG-FKVQCDFTRXXXX 170
H V+ A+ ++ L G I D+ K K + +F EG +++ D R
Sbjct: 433 HIGP-VQSLAL-ADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLIS- 489
Query: 171 XXXXXXXXGSIDGNIYVWD 189
G+ DG + VW+
Sbjct: 490 --------GAHDGVVKVWE 500
Score = 43 (20.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 179 GSIDGNIYVWDCNTEQVEA 197
GS DG IY+W N E+
Sbjct: 528 GSEDGKIYLWLFNNAPNES 546
>FB|FBgn0034646 [details] [associations]
symbol:Rae1 "Rae1" species:7227 "Drosophila melanogaster"
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045886 "negative regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0010506 "regulation of
autophagy" evidence=IMP] [GO:0005643 "nuclear pore" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005635 GO:GO:0051297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:2000045 EMBL:AY118568
UniGene:Dm.11463 ProteinModelPortal:Q7JVX4 STRING:Q7JVX4
PaxDb:Q7JVX4 PRIDE:Q7JVX4 FlyBase:FBgn0034646 InParanoid:Q7JVX4
OrthoDB:EOG42NGFW ArrayExpress:Q7JVX4 Bgee:Q7JVX4 Uniprot:Q7JVX4
Length = 360
Score = 98 (39.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT-YDGAGTT---IISGHFDKKVRFW 63
D +KV SCD+ +K+WDL S + + + T + G T +++G +DK ++FW
Sbjct: 93 DGSKVFVASCDKQVKLWDLASDQVMQVAAHDGPVKTCHMVKGPTYTCLMTGSWDKTLKFW 152
Query: 64 DFRAEEKVRDIEL 76
D R+ + I L
Sbjct: 153 DTRSPNPMMTINL 165
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 99 NDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIE-LHGKITSLDLSKGKYYFVFAEG 157
ND+ + GT + G D FWD A K++ E + IT + F +A G
Sbjct: 270 NDIAFHPVHGTLVTVGS-DGTFSFWDKDARTKLKSSETMDQSITKCGFNANGQIFAYAVG 328
Query: 158 F 158
+
Sbjct: 329 Y 329
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CAKF D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD 105
V+ WD R ++ +LH + +L SS + L D
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/108 (30%), Positives = 48/108 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTY-D--GAGTTIISGHFDK 58
CA+F D +VS S D+T+K+WD S E + VTY D +GT I + D
Sbjct: 150 CARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDN 209
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD 105
V+ WD R ++ +LH + +L SS + L D
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILD 257
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 100 (40.3 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 209 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 264
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + +H L L S + +D A T I+
Sbjct: 265 TVRVWDVNTGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 318
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 380 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 409
Score = 49 (22.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 420 IVSGAYDGKIKVWDLIA 436
Score = 41 (19.5 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 423 GAYDGKIKVWD 433
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 96 (38.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/108 (29%), Positives = 46/108 (42%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKK 59
C P V SGS DR+ +I+D RS + F V + A +I+G D
Sbjct: 153 CCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNV 212
Query: 60 VRFWDFR-AEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYD 105
+R WD R E+ + + H ITS +SK + S N +D
Sbjct: 213 IRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Score = 62 (26.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 179 GSIDGNIYVWDCNTEQVEAVL 199
GS D +Y+WD NT+Q++ L
Sbjct: 300 GSSDRQVYIWDTNTKQLQYCL 320
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 120 (47.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/152 (31%), Positives = 74/152 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLR--STETKFAGS-SCNDLVTYDGAGTTIISGHFDKKVRFWD 64
D T + + S D T+K+WDL +T+F G+ S DL +Y II+ DK +R +D
Sbjct: 271 DNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDL-SYSPLNGMIITASPDKNLRLYD 329
Query: 65 FRAEEKVRDIELHG---KITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
R++ HG K T L S+ +T S+ N+ + +SG +D +V+
Sbjct: 330 PRSK--------HGNFVKNTYLGHSQWVQT-CRWSTTNEYL--------FVSGAYDNRVK 372
Query: 122 FWDFRAEEKVRDIELHG---KITSLDLSKGKY 150
WD+R+ K EL G K+ + D S KY
Sbjct: 373 LWDYRSP-KAPIFELIGHEDKVLACDWSNPKY 403
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 101 (40.6 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 267 CLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 322
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + +H L L S + +D A T I+
Sbjct: 323 TVRVWDVNTGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 376
Score = 52 (23.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 438 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 467
Score = 49 (22.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 478 IVSGAYDGKIKVWDLVA 494
Score = 41 (19.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 481 GAYDGKIKVWD 491
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCN-DLVTYDGA--GTTIISGHFDKKVR 61
F D +V+G+ DR +K+WDL + + ++ S D+ + D + G I+SG D+ R
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTI--ISGH 115
WD + + +E+ +T++ +S + GS + + +GT + + GH
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGH 483
Score = 35 (17.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
GS+D I VW+
Sbjct: 502 GSLDKTIKVWE 512
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/114 (34%), Positives = 50/114 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD S + F+ S + V + GT I S D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDH 208
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTII 112
VR WD R ++ ++H S G S N LVT GT I
Sbjct: 209 AVRIWDIRMNRLLQHYQVH--------SCGVNCLSFHPSGNSLVTASSDGTVKI 254
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 115 (45.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET--KFA--GSSCNDLVTYDGAGTTIISGHFDKKVRFW 63
D +++VS S D+T++ WD+ + + K A S N IISG D + W
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 64 DFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYD---GAGTTIISGHFD 117
D R ++ +IT++ S + F G ND+ +D G T + GH D
Sbjct: 167 DMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Score = 111 (44.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSSCNDLVTYDGAGTTIISGHFDKK 59
C P ++SGS D T K+WD+R F V++ A I +G D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDND 203
Query: 60 VRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYD 105
V+ WD R E +E H IT + LS N L +D
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 36 (17.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 179 GSIDGNIYVWDCNTEQ 194
GS D +++WD + +
Sbjct: 290 GSSDRMVHIWDTTSRR 305
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 118 (46.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 13 VSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
+SG+CD + K+WD+R K F G + + V + +G +G D R +D RA++
Sbjct: 200 ISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQ 259
Query: 70 KV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGHFDKKV 120
++ D + G ITS+ SK FAG +CN D + + AG +++GH D +V
Sbjct: 260 ELAMYSHDNIICG-ITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAG--VLAGH-DNRV 315
>UNIPROTKB|H0YLU1 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007186
EMBL:AC023906 HGNC:HGNC:4401 ChiTaRS:GNB5 EMBL:AC010674
Ensembl:ENST00000558519 Bgee:H0YLU1 Uniprot:H0YLU1
Length = 103
Score = 99 (39.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSS----CNDLVTYDGAGTTIISGH 55
C+ F ++++ S D T +WD+ S + F G C DL + G T +SG
Sbjct: 16 CS-FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-TGNTFVSGG 73
Query: 56 FDKKVRFWDFRAEEKVRDIELH 77
DKK WD R+ + V+ E H
Sbjct: 74 CDKKAMVWDMRSGQCVQAFETH 95
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 118 (46.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 9 PTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDL--VTYDGAGTTIISGHFDKKVRFWDFR 66
P +GS D T+K+WD+R + + + VT++ IISG D ++ WD R
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLR 213
Query: 67 AEEKVRDIELHG-KITSLDLSKGTETKFAGSSCNDLVTYD 105
+ + ++ HG +T L LS + S N + +D
Sbjct: 214 QNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 83 (34.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHG-KITSLDLSK-GKY 150
VT++ IISG D ++ WD R + + ++ HG +T L LS G Y
Sbjct: 189 VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSY 239
Score = 75 (31.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFA---GSSCNDL-VTYDGAGTTIISGHFD 57
C KF + + S DR + +W++ +A G S + + Y+ G+ + S D
Sbjct: 61 CCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTD 120
Query: 58 KKVRFWDFRAEEKVRDIELHGKITS--LDLSKGTETKFAGSSCNDLVTYD 105
K V WD E+V+ ++ H + +G + GS + +D
Sbjct: 121 KTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+ +WD+ S K G+ + ++Y + SG D+ +R WD
Sbjct: 267 DAEEICSASWDHTIGVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 125
R ++ G + SL L+ + T + +S T++ +ISG D V+ WD
Sbjct: 327 RTKD--------GSLVSLSLT--SHTGWV-TSVKWSPTHE---QQLISGSLDNIVKLWDT 372
Query: 126 RA-EEKVRDIELH-GKITSLD 144
R+ + + D+ H K+ S+D
Sbjct: 373 RSCKAPLYDLAAHEDKVLSVD 393
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 101 (40.6 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 308 CLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 363
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + +H L L S + +D A T I+
Sbjct: 364 TVRVWDVNTGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 417
Score = 52 (23.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Score = 49 (22.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 519 IVSGAYDGKIKVWDLVA 535
Score = 41 (19.5 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 522 GAYDGKIKVWD 532
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 98 (39.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 28/79 (35%), Positives = 37/79 (46%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWD---LRSTETKFAGSSCNDLVTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD L+ +T + + YD IISG D
Sbjct: 215 CLQY--DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VIISGSSDS 270
Query: 59 KVRFWDFRAEEKVRDIELH 77
VR WD E V + H
Sbjct: 271 TVRVWDVNTGEMVNTLIHH 289
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 386 VVSGSSDNSIRLWDIECGACLRVLEGHEEL 415
Score = 49 (22.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 426 IVSGAYDGKIKVWDLVA 442
Score = 41 (19.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 429 GAYDGKIKVWD 439
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 272 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 327
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + +H L L S + +D A T I+
Sbjct: 328 TVRVWDVNTGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 381
Score = 52 (23.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 443 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 472
Score = 49 (22.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 483 IVSGAYDGKIKVWDLVA 499
Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 486 GAYDGKIKVWD 496
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ +GT I S D+
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 59 KVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYD 105
V+ WD R + ++ ++H G + + SS L D
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 117 (46.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 39/118 (33%), Positives = 55/118 (46%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTET--KFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D +SG+CD T K+WDLRS + F G + + V Y G + +G D R +D
Sbjct: 202 DKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFD 261
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIISGH 115
RA+ ++ D L G ITS+ S FAG +CN T G ++GH
Sbjct: 262 IRADRELMQYTHDNILCG-ITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGH 318
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 100 (40.3 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + E K G + + L + YD II+G D
Sbjct: 308 CLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDS 363
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + +H L L S + +D A T I+
Sbjct: 364 TVRVWDVNTGEMLNTL-IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 417
Score = 52 (23.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 508
Score = 49 (22.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD A
Sbjct: 519 IVSGAYDGKIKVWDLVA 535
Score = 41 (19.5 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 522 GAYDGKIKVWD 532
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 110 (43.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 42/166 (25%), Positives = 70/166 (42%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETKFA--GSSCN-DLVT---YDGAGTTIISG 54
M F D +++SGS D T+K+W+ E KF G + D V+ + TI+SG
Sbjct: 116 MSVAFSSDNRQIISGSRDATIKVWNTLG-ECKFTLEGPEAHQDWVSCIRFSPNTPTIVSG 174
Query: 55 HFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISG 114
+D KV+ WD ++ + + +T T + + VT G+ SG
Sbjct: 175 SWDNKVKIWD------IKSFKCNHTLTD-------HTGYVNT-----VTISPDGSLCASG 216
Query: 115 HFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKV 160
D W+ + + + +E I +L S KY+ A K+
Sbjct: 217 GKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAATDDKI 262
Score = 40 (19.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 182 DGNIYVWDCNTEQVEA 197
D I +WD T+QV A
Sbjct: 259 DDKIIIWDLLTKQVLA 274
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 117 (46.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 44/129 (34%), Positives = 60/129 (46%)
Query: 12 VVSGSCDRTLKIW---DLRSTET-KFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+ SGS D+TLK+W DL+ E+ K + N LV DG + S D KV+ W
Sbjct: 187 IYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGR---VYSASADGKVKIW---G 240
Query: 68 EEKVRDIE-LHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 126
+EK + IE +SL + K T A S N +V G G + G D V W+
Sbjct: 241 KEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVV-SGDGNWVYGGGSDGFVIGWE-- 297
Query: 127 AEEKVRDIE 135
+EK D E
Sbjct: 298 KKEKEGDFE 306
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 118 (46.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 7 GDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTI---ISGHFDK--KVR 61
G K + GS L + ++ A +S N+L +D + + ++GH DK V
Sbjct: 257 GTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVD 316
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKG--TETKFAGSSCNDL-VTYDGAGTTIISGHFDK 118
F + V I DL KG T T S+CN + ++ DG T+ SGH D
Sbjct: 317 VSKFSSRHVV-SAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGL--TVFSGHMDG 373
Query: 119 KVRFWDFRAEEKVRDIELHGK-ITSLDLSK 147
+R WD + + + ++ H +TS+ LS+
Sbjct: 374 NLRLWDIQTGKLLSEVAGHSSAVTSVSLSR 403
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 115 (45.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 49/202 (24%), Positives = 78/202 (38%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLV---TYDGAGTTIISGHFDKKVRFWD 64
D + S S D+T+KIWD+ S + + V +++ I+SG FD+ VR WD
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 65 FRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYD---GAGTTIISGHFDKKV 120
E + I H +T + ++ +GS + +D G IS K+V
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV 218
Query: 121 RFWDFRAEEK-VRDIELHGKITSLDLSKGKYYFVFAEGFKVQ--CDFTRXXXXXXXXXXX 177
F F K V L + + K G K + C F+
Sbjct: 219 SFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFS-TFSVTCGKWIV 277
Query: 178 XGSIDGNIYVWDCNTEQVEAVL 199
GS D IY+++ T ++ L
Sbjct: 278 TGSEDNLIYIYNLQTREIVQTL 299
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 117 (46.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 40/157 (25%), Positives = 70/157 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE-----TKFAGSSCNDLVTYDGAGTTIISGHF 56
CAKF D +VS S D+T+KIWD + + + F G + + V ++ GT I S
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFA--NFVAFNPNGTCIASAGS 206
Query: 57 DKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHF 116
D V+ WD R + ++ ++H G +C V++ +G +I+
Sbjct: 207 DHTVKIWDIRVNKLLQHYQVHS---------------GGVNC---VSFHPSGNYLITASS 248
Query: 117 DKKVRFWDFRAEEKVRDIELH-GKITSLDLSKGKYYF 152
D ++ D + ++ H G + ++ SKG F
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 115 (45.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 13 VSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
VSG+CD + K+WD+R K F G + + VT+ G +G D R +D RA++
Sbjct: 200 VSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQ 259
Query: 70 KV----RDIELHGKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIISGHFDKKV 120
++ D + G ITS+ SK AG +CN T + I++GH D +V
Sbjct: 260 ELAMYSHDNIICG-ITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGH-DNRV 315
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 115 (45.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 13 VSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
+SG+CD + K+WD+R + F G + + + + G I +G D R +D RA++
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 70 KVR---DIELHGKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIISGHFDKKV 120
++ D + ITS+ S FAG +CN + G I+SGH D +V
Sbjct: 260 ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGH-DNRV 315
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 115 (45.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 13 VSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
+SG+CD + K+WD+R + F G + + + + G I +G D R +D RA++
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 70 KVR---DIELHGKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIISGHFDKKV 120
++ D + ITS+ S FAG +CN + G I+SGH D +V
Sbjct: 260 ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGH-DNRV 315
>WB|WBGene00003803 [details] [associations]
symbol:rae-1 species:6239 "Caenorhabditis elegans"
[GO:0040013 "negative regulation of locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 GO:GO:0040013 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040011 GO:GO:0005643 GO:GO:0040035
GO:GO:0051028 GeneTree:ENSGT00530000063440 HOGENOM:HOG000208823
KO:K14298 EMBL:Z80216 PIR:T20723 RefSeq:NP_492650.1
ProteinModelPortal:Q93454 SMR:Q93454 STRING:Q93454 PaxDb:Q93454
EnsemblMetazoa:F10G8.3.1 EnsemblMetazoa:F10G8.3.2 GeneID:172864
KEGG:cel:CELE_F10G8.3 UCSC:F10G8.3.1 CTD:172864 WormBase:F10G8.3
eggNOG:NOG240406 InParanoid:Q93454 OMA:RVAIQYV NextBio:877323
Uniprot:Q93454
Length = 373
Score = 90 (36.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT---YDGAG-TTIISGHFDKKV 60
++ D +K+ D+ ++WDL S + G+ + T +G +++G FDK +
Sbjct: 97 WIEDSSKIFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTL 156
Query: 61 RFWDFRA---EEKVRDIELHGKITSLDL 85
RFWD + + ++ I+L ++ + D+
Sbjct: 157 RFWDMKNLPNQTQMAQIQLPERVYAADV 184
Score = 65 (27.9 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 82 SLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGK-I 140
S +L G + +A ND+ + GT + G D + WD A K++ E H +
Sbjct: 268 SAELVNGFQEIYA---VNDICFHPQHGTLVTIGS-DGRYSMWDKDARTKLKTSEPHPMPL 323
Query: 141 TSLDLSKGKYYFVFAEGF 158
T D+ + V+A G+
Sbjct: 324 TCCDVHSSGAFLVYALGY 341
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 116 (45.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/143 (29%), Positives = 65/143 (45%)
Query: 8 DPTKVVSGSCDRTLKIWDLR--STETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDF 65
D ++ S S D T+++WD S +T GS + ++Y + SG D+ VR WD
Sbjct: 267 DSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFNHISYSPLCRRLASGSTDRHVRLWDP 326
Query: 66 RAEEKVRDIELHGKITSLDLSKG--TETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFW 123
R+ +D L + SL G T K+A S + LV SG D V+ W
Sbjct: 327 RS----KDGSL--VLLSLTSHSGWVTAVKWAPSHEHQLV----------SGSLDNLVKLW 370
Query: 124 DFRA-EEKVRDIELH-GKITSLD 144
D R+ + + D+ H K+ +D
Sbjct: 371 DTRSCKAPLYDVSAHEDKVLCVD 393
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 112 (44.5 bits), Expect = 0.00010, P = 0.00010
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 95 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 154
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 155 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 211
Query: 116 FDKKV 120
D +V
Sbjct: 212 -DNRV 215
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 79 (32.9 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 12 VVSGSCDRTLKIWDLRSTETK--FAG--SSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
+VS S D T++IWD + E + G S D V +D G + S D ++ WDF+
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQD-VAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 68 E-EKVRDIELH 77
E ++ + H
Sbjct: 182 SYECIKTMHGH 192
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKVRDIELHGKI-TSLDLSKGKYYFV 153
+ + G ++S DK +R WD R + ++ + H TS+D K Y +
Sbjct: 345 LAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI 397
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 179 GSIDGNIYVWDC 190
GS+D + VW+C
Sbjct: 399 GSVDQTVKVWEC 410
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 95 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 154
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 155 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 211
Query: 116 FDKKV 120
D +V
Sbjct: 212 -DNRV 215
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD +S E G + + L + YD I++G D
Sbjct: 230 CLQY--DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 285
Query: 59 KVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD + E + + +H L L S + +D A T IS
Sbjct: 286 TVRVWDVSSGEVLNTL-IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDIS 339
Score = 53 (23.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 111 IISGHFDKKVRFWDFRA 127
I+SG +D K++ WD +A
Sbjct: 441 IVSGAYDGKIKVWDLQA 457
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 401 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 430
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 444 GAYDGKIKVWD 454
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 94 (38.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 196 CLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 251
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 252 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 305
Score = 52 (23.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 367 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 396
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 410 GAYDGKIKVWD 420
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTETK---FAGSSCNDLVTYDGAGTTIISGHFD 57
MC D T +++GS D+ +KIW L + FA V++ + IS D
Sbjct: 577 MCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKD 636
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTII--SG 114
K++++WD E ++ IE H G++ SL + + +GS + ++ T I S
Sbjct: 637 KRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIFVESD 696
Query: 115 HFDKKVRFWDFRAEEKVR 132
+ + W+ E+ R
Sbjct: 697 RQREMEQTWEATLEDDTR 714
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 213 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 268
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 322
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 384 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 413
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 427 GAYDGKIKVWD 437
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 213 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 268
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 322
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 384 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 413
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 427 GAYDGKIKVWD 437
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 94 (38.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 230 CLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 285
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 286 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 339
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 401 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 430
Score = 41 (19.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 444 GAYDGKIKVWD 454
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 94 (38.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 232 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 287
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 288 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 341
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 403 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 432
Score = 41 (19.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 446 GAYDGKIKVWD 456
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 94 (38.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 233 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 288
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 289 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 342
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 404 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 433
Score = 41 (19.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 447 GAYDGKIKVWD 457
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 83 (34.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 35/134 (26%), Positives = 54/134 (40%)
Query: 7 GDPTKVVSGSCDRTLKIWDLRSTETKFAG------SSCNDLVTYDGAGTTIISGHFDKKV 60
GD +++ S D+T+K+WD+ E K G + + ++ ++SG D
Sbjct: 139 GDSC-LLTASGDQTIKVWDVE--ENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCF 195
Query: 61 RFWDFRAEEKVRDIELHGKITSL-------DLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
WD R + E T + LSK + A SS V Y TI +
Sbjct: 196 ALWDLRCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIAT 255
Query: 114 -GHFDKKVRFWDFR 126
G D ++FWD R
Sbjct: 256 AGAPDSALKFWDIR 269
Score = 74 (31.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 142 SLDLSKGKYYFVFAEGFKVQCDFTRXXXXXXXXXXXXGSIDGNIYVWDCNTEQVEAVLKD 201
+L L KG F+ G ++ F R GS DGN Y+W N QV+ ++
Sbjct: 321 TLRLDKGPVQS-FS-GCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILK 378
Query: 202 MH 203
H
Sbjct: 379 GH 380
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 114 (45.2 bits), Expect = 0.00021, P = 0.00021
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGS-SCNDLVTYDGAGTTIISGHFDK 58
CAKF D +VS S D+T+KIWD + + F+ S + V ++ GT I S D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 208
Query: 59 KVRFWDFRAEEKVRDIELH 77
V+ WD R + ++ ++H
Sbjct: 209 AVKIWDIRMNKLLQHYQVH 227
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELMTYSHDNIICG-ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 151 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 210
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 211 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 267
Query: 116 FDKKV 120
D +V
Sbjct: 268 -DNRV 271
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 94 (38.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 245 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 300
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 354
Score = 52 (23.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 445
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 459 GAYDGKIKVWD 469
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 94 (38.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 245 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 300
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 354
Score = 52 (23.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 445
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 459 GAYDGKIKVWD 469
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 94 (38.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 245 CLQY--DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 300
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASATDIT 354
Score = 52 (23.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 445
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 459 GAYDGKIKVWD 469
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 98 (39.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLR--STETKFAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + S +G + + L + YD IISG D
Sbjct: 227 CLQY--DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNR--VIISGSSDA 282
Query: 59 KVRFWDFRAEEKVRDIELH 77
VR WD E ++ + H
Sbjct: 283 TVRVWDVETGECIKTLIHH 301
Score = 93 (37.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTE-TKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
D +VS S DRT+K+W + + E + + G ++SG D +R WD
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIH 413
Query: 67 AEEKVRDIELHGKI 80
+ +R +E H ++
Sbjct: 414 SGVCLRVLEGHEEL 427
Score = 58 (25.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKV 160
I+SG +D K++ WD +A R + + SL G+ + + + F++
Sbjct: 438 IVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQI 487
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 98 (39.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLR--STETKFAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K+VSG D T+KIWD + S +G + + L + YD IISG D
Sbjct: 227 CLQY--DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNR--VIISGSSDA 282
Query: 59 KVRFWDFRAEEKVRDIELH 77
VR WD E ++ + H
Sbjct: 283 TVRVWDVETGECIKTLIHH 301
Score = 93 (37.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTE-TKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFR 66
D +VS S DRT+K+W + + E + + G ++SG D +R WD
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIH 413
Query: 67 AEEKVRDIELHGKI 80
+ +R +E H ++
Sbjct: 414 SGVCLRVLEGHEEL 427
Score = 58 (25.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGKYYFVFAEGFKV 160
I+SG +D K++ WD +A R + + SL G+ + + + F++
Sbjct: 438 IVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQI 487
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCNDL-VTYDGAGTTIISGHFDK 58
C ++ D K++SG D ++KIWD S E G + + L + YD I++G D
Sbjct: 218 CLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDS 273
Query: 59 KVRFWDFRAEEKVRDIELHGK-ITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
VR WD E + + H + + L S G S + +D A T I+
Sbjct: 274 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC--SKDRSIAVWDMASPTDIT 327
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 389 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 418
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 432 GAYDGKIKVWD 442
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 107 (42.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/125 (25%), Positives = 54/125 (43%)
Query: 1 MCAKFLGDPTKVVSGSCDRTLKIWDLRSTE--TKFAGSSCNDL-VTYDGAGTTIISGHFD 57
+C F T V +GS D T K+WD+ S E + AG + + ++ G +++G FD
Sbjct: 181 VCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFD 240
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS--- 113
WD + KV + H G+I+ + + S +D G ++
Sbjct: 241 HTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL 300
Query: 114 GHFDK 118
GH D+
Sbjct: 301 GHNDE 305
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 108 GTTIISGHFDKKVRFW 123
G TII+G D R W
Sbjct: 399 GDTIITGSKDNTCRIW 414
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 111 (44.1 bits), Expect = 0.00026, P = 0.00026
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET--KFA--GSSCNDLVTYDGAGTTIISGHFD 57
CA+F D + S S D+T+K+WD S E F G N V + +GT I + D
Sbjct: 151 CARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANH-VEFHPSGTCIAAAGTD 209
Query: 58 KKVRFWDFRAEEKVRDIELH-GKITSL 83
K V+ WD R ++ ++H + SL
Sbjct: 210 KTVKVWDVRMNRLLQHYQVHTAAVNSL 236
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET-KFAGSSCNDLVTYDGAGTTIISGHFDKKV 60
C ++ D K++SG D ++KIWD ++ E K ++ I++G D V
Sbjct: 230 CLQY--DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTV 287
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIIS 113
R WD + E + + +H L L S + +D A T IS
Sbjct: 288 RVWDVNSGEVLNTL-IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDIS 339
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 IISGHFDKKVRFWDFRAEEKVRDIELHGKI 140
++SG D +R WD +R +E H ++
Sbjct: 401 VVSGSSDNTIRLWDIECGACLRVLEGHEEL 430
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 179 GSIDGNIYVWD 189
G+ DG I VWD
Sbjct: 444 GAYDGKIKVWD 454
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 255 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 255 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 255 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 255 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD ++K+WD+R + + F G + + V + G +G D R +D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ D + G ITS+ S+ AG +CN D + D AG +++GH
Sbjct: 255 LRADQELLMYSHDNIICG-ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKVRDIELHGKI----TSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ + H I TS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELM-VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 113 (44.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 7 GDPTKVVSGSCDRTLKIWDLR----STETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 62
G+ T + +GSCD +IW L ST +K G + + ++ G +++G D+
Sbjct: 334 GEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFS--LKWNKKGDYLLTGSVDRTAVV 391
Query: 63 WDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTT 110
WD +AEE + E H T LD+ FA SS + ++ G T
Sbjct: 392 WDVKAEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDSMIYLCKIGET 438
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 179 GSIDGNIYVW 188
GS+D +I++W
Sbjct: 559 GSLDKSIHIW 568
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 99 (39.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSS----CNDLVTYDGAGTTIISGH 55
C+ F ++++ S D T +WD+ S + F G C DL + G T +SG
Sbjct: 159 CS-FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-TGNTFVSGG 216
Query: 56 FDKKVRFWDFRAEEKVRDIELH 77
DKK WD R+ + V+ E H
Sbjct: 217 CDKKAMVWDMRSGQCVQAFETH 238
Score = 48 (22.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKV 131
V Y +G SG D R +D RA+ +V
Sbjct: 245 VRYYPSGDAFASGSDDATCRLYDLRADREV 274
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 110 (43.8 bits), Expect = 0.00038, P = 0.00038
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 8 DPTKVVSGSCDRTLKIWDLRS--TETKFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R F G + + V++ G +G D R +D
Sbjct: 195 DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFD 254
Query: 65 FRAEEKV----RDIELHGKITSLDLSKGTETKFAGS---SCNDLVTYDGAGTTIISGHFD 117
RA++++ D + G ITS+ SK AG +CN T G +++GH D
Sbjct: 255 LRADQELLLYSHDNIICG-ITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGH-D 312
Query: 118 KKV 120
+V
Sbjct: 313 NRV 315
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 110 (43.8 bits), Expect = 0.00038, P = 0.00038
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWD 64
D VSG+CD + K+WD+R + F G + + + + G +G D R +D
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Query: 65 FRAEEKVRDIELHGKI----TSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGH 115
RA++++ + H I TS+ SK AG +CN D + D AG +++GH
Sbjct: 255 LRADQELM-VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGH 311
Query: 116 FDKKV 120
D +V
Sbjct: 312 -DNRV 315
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 112 (44.5 bits), Expect = 0.00039, P = 0.00039
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTE-----TKFAGSSCNDLVTYDGAGTTIISGHF 56
CA+F D + S DRT+++WD S + T + GS+ V ++ +GT I S
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT--FVDFNSSGTCIASSGA 206
Query: 57 DKKVRFWDFRAEEKVRDIELH 77
D ++ WD R + ++ ++H
Sbjct: 207 DNTIKIWDIRTNKLIQHYKVH 227
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 110 (43.8 bits), Expect = 0.00042, P = 0.00042
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 13 VSGSCDRTLKIWDLRSTET--KFAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
VSGSCDR IWD+RS F G + + V + G I +G D R +D RA+
Sbjct: 218 VSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRAD- 276
Query: 70 KVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEE 129
R++ + K + + F +S V + +G + +G+ D V WD E
Sbjct: 277 --REVAVFAKESII---------FGVNS----VDFSVSGRLLFAGYNDYTVNLWDTLKSE 321
Query: 130 KVRDIELH-GKITSLDLS 146
+V + H K++ + +S
Sbjct: 322 RVCLLYGHENKVSCVQVS 339
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 99 (39.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 2 CAKFLGDPTKVVSGSCDRTLKIWDLRSTET--KFAGSS----CNDLVTYDGAGTTIISGH 55
C+ F ++++ S D T +WD+ S + F G C DL + G T +SG
Sbjct: 201 CS-FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-TGNTFVSGG 258
Query: 56 FDKKVRFWDFRAEEKVRDIELH 77
DKK WD R+ + V+ E H
Sbjct: 259 CDKKAMVWDMRSGQCVQAFETH 280
Score = 48 (22.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 102 VTYDGAGTTIISGHFDKKVRFWDFRAEEKV 131
V Y +G SG D R +D RA+ +V
Sbjct: 287 VRYYPSGDAFASGSDDATCRLYDLRADREV 316
>ZFIN|ZDB-GENE-050522-303 [details] [associations]
symbol:fbxw2 "F-box and WD repeat domain containing
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-050522-303 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 CTD:26190 HOVERGEN:HBG051593
KO:K10261 EMBL:BC095232 IPI:IPI00832593 RefSeq:NP_001018175.1
UniGene:Dr.79396 ProteinModelPortal:Q503P7 STRING:Q503P7
GeneID:553942 KEGG:dre:553942 InParanoid:Q503P7 NextBio:20880537
ArrayExpress:Q503P7 Uniprot:Q503P7
Length = 455
Score = 111 (44.1 bits), Expect = 0.00046, P = 0.00046
Identities = 37/160 (23%), Positives = 73/160 (45%)
Query: 14 SGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRAEEKVRD 73
+GS D + K+WD+R+ + + G + T +++G FD + W++ K++
Sbjct: 163 TGSDDLSAKLWDVRTGQCVY-GIQTHTCATVKFDEQKLVTGSFDNTIACWEWSTGAKIQQ 221
Query: 74 IELH-GKITSLDLSKGTETKFAGSSCNDLVTYD-GAGTTI--ISGHFDKKVRFWDFRAEE 129
H G + S+D + +T +GS+ + + AGT + ++GH + W +
Sbjct: 222 FRGHTGAVFSIDYNDELDTLVSGSADFTVKVWSLSAGTCVNTLTGHTE-----WVTKVHL 276
Query: 130 KVRDIE--LHGKITSLDLSKGKYYF-VFAEGFKVQCDFTR 166
+ +E +H + LS KY V+ G ++ C R
Sbjct: 277 QKSQVESMMHSPGDYILLSVDKYEIKVWPIGREINCKCLR 316
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 111 (44.1 bits), Expect = 0.00052, P = 0.00052
Identities = 36/114 (31%), Positives = 53/114 (46%)
Query: 10 TKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDG--AGTTIISGHFDKKVRFWDFR- 66
T +SGS D+T+K+WDL + ++ S D V + T ++SG +D +R WD R
Sbjct: 137 TTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTRI 196
Query: 67 AEEKVRDIELHGKITSLDL---SKGTETKFAGSSCN--DLVTYDGAGTTIISGH 115
A+ +V HG+ + L S T G S DLV T +S H
Sbjct: 197 ADPEVMSFS-HGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNH 249
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDL--RSTETKFAGSSCNDLVTYDGA--GTTIISGHFDKKV 60
F D + +G+ D+ +++WD+ R+ +FAG D+ + D A G TI SG D+ V
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHE-QDIYSLDFARDGRTIASGSGDRTV 412
Query: 61 RFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYD 105
R WD + + +T++ +S T+ AGS + +D
Sbjct: 413 RLWDIENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWD 457
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 110 (43.8 bits), Expect = 0.00054, P = 0.00054
Identities = 42/150 (28%), Positives = 67/150 (44%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDL--VTYDGAGTTIISGHFDKKVRFWDF 65
D T +V+GS D TLK+WDL+ K S+ + +Y I++ DK +R +D
Sbjct: 261 DATTLVTGSWDHTLKVWDLQLEGIKTEISTNKSIFDASYSKLNRLIVTASADKNLRLYDA 320
Query: 66 RAEEK--VRDIEL-HGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRF 122
R + VR+ L H + TE +F +SG +D + +
Sbjct: 321 RTNQGSVVRNTYLGHNAWVQTVMWSNTE-EFL----------------FVSGSYDTQNKL 363
Query: 123 WDFRAEEK-VRDIELHG-KITSLDLSKGKY 150
WD R+ + + D+ HG K+ +D S KY
Sbjct: 364 WDCRSPKAPLYDLLGHGEKVLDIDWSNPKY 393
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 109 (43.4 bits), Expect = 0.00055, P = 0.00055
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 13 VSGSCDRTLKIWDLRSTETKFAGSSC-NDL--VTYDGAGTTIISGHFDKKVRFWDFRAEE 69
VSG CD+ +WD+RS + A + +D+ V Y +G SG D R +D RA+
Sbjct: 213 VSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 272
Query: 70 KVRDIELHGKI---TSLDLSKGTETKFAGSSCNDLVTYD---GAGTTIISGH 115
+V I +S+D S FAG + + +D GA +I+ GH
Sbjct: 273 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSILFGH 324
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 37/122 (30%), Positives = 51/122 (41%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGA---GTTIISGHFDKKVR 61
F D ++VSGS DR+++IWDLR+++ S D VT G I +G D+ VR
Sbjct: 305 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLT-LSIEDGVTTVAVSPDGKLIAAGSLDRTVR 363
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
WD G + L G E V + G I SG D+ V+
Sbjct: 364 VWDSTT----------GFLVER-LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVK 412
Query: 122 FW 123
W
Sbjct: 413 LW 414
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 37/122 (30%), Positives = 51/122 (41%)
Query: 5 FLGDPTKVVSGSCDRTLKIWDLRSTETKFAGSSCNDLVTYDGA---GTTIISGHFDKKVR 61
F D ++VSGS DR+++IWDLR+++ S D VT G I +G D+ VR
Sbjct: 305 FFPDGDRLVSGSGDRSVRIWDLRTSQCSLT-LSIEDGVTTVAVSPDGKLIAAGSLDRTVR 363
Query: 62 FWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 121
WD G + L G E V + G I SG D+ V+
Sbjct: 364 VWDSTT----------GFLVER-LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVK 412
Query: 122 FW 123
W
Sbjct: 413 LW 414
>POMBASE|SPBC1711.16 [details] [associations]
symbol:SPBC1711.16 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.16 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006364 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET eggNOG:NOG290487 OrthoDB:EOG4DNJCV RefSeq:NP_595889.1
ProteinModelPortal:Q9P775 STRING:Q9P775 EnsemblFungi:SPBC1711.16.1
GeneID:2539789 KEGG:spo:SPBC1711.16 NextBio:20800938 Uniprot:Q9P775
Length = 516
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 12 VVSGSCDRTLKIWDLRSTETKFAGSSCNDLVT----YDGAGTTIISGHFDKKVRFWDFRA 67
+VSGS D TLK+WDL + + + +D V+ Y A + ++SG +DK + D R
Sbjct: 270 LVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADLRL 329
Query: 68 EEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTY 104
EE ++ + ++ + +E F + N +V Y
Sbjct: 330 EEAPSSFQVTSDVENVAWDQHSENNFFIGTDNGIVYY 366
>UNIPROTKB|G4NDD2 [details] [associations]
symbol:MGG_00946 "Poly(A)+ RNA export protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:CM001235 GO:GO:0005643 GO:GO:0016973 KO:K14298
GO:GO:0031081 GO:GO:0000973 GO:GO:2000728 RefSeq:XP_003718005.1
ProteinModelPortal:G4NDD2 EnsemblFungi:MGG_00946T0 GeneID:2674766
KEGG:mgr:MGG_00946 Uniprot:G4NDD2
Length = 358
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFAGSS---CNDLVTYDGAGTT-IISGHFDKKVRFW 63
D TK+VSG D+ K+ D+ + +T + +D G+ +I+G +DK V++W
Sbjct: 90 DGTKIVSGGADKQAKVCDMNTGQTAQVAQHEKPVRSVRWFDNNGSPMVITGSWDKTVKYW 149
Query: 64 DFRAEEKVRDIELHGKITSLDL 85
D R + V ++ ++ ++D+
Sbjct: 150 DLRQQSPVATLQCQERVYTMDV 171
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 3 AKFL-GDPTKVVSGSCDRTLKIWDLRSTET--KFAGSS--CNDLVTYDGA---GTTIISG 54
AKF DPT V+S S DRT+++WDL S + F G S G+ +++SG
Sbjct: 144 AKFSPSDPTCVLSASDDRTVRLWDLPSENSIKSFVGHSDYVRTAAFMPGSLASSGSLVSG 203
Query: 55 HFDKKVRFWDFRAEEKVRDIELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISG 114
+D+ VR WD R E G+ +++ G + V GTT+++
Sbjct: 204 SYDRTVRLWDPRME---------GR-SAMTFKMGAPL--------ETVLPMPTGTTVLAA 245
Query: 115 HFDKKVRFWDFRAEEKVRDIELHGK-ITSLDLS 146
D K+ D A + + I+ H K +TSL L+
Sbjct: 246 A-DNKIAVLDIVAGKPLHMIQSHQKTVTSLSLA 277
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 103 (41.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 8 DPTKVVSGSCDRTLKIWDLRSTETKFA------GSSCNDLVTYDGAGTT-IISGHFDKKV 60
D + S S DRT+K+W L S+ F G +C D Y G +ISG D+ V
Sbjct: 125 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY--YSGGDKPYLISGADDRLV 182
Query: 61 RFWDFRAEEKVRDIELHGKITS 82
+ WD++ + V+ +E H + S
Sbjct: 183 KIWDYQNKTCVQTLEGHAQNVS 204
Score = 48 (22.0 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 179 GSIDGNIYVWDCNTEQVEAVL 199
GS DG + +W +T ++E+ L
Sbjct: 218 GSEDGTVRIWHSSTYRLESTL 238
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 109 (43.4 bits), Expect = 0.00068, P = 0.00068
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 13 VSGSCDRTLKIWDLRSTETK--FAGSSCN-DLVTYDGAGTTIISGHFDKKVRFWDFRAEE 69
VSG+CD + K+WD+R + F G + + + + G +G D R +D RA++
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 70 KVRDIELHGKI----TSLDLSKGTETKFAGS---SCN--DLVTYDGAGTTIISGHFDKKV 120
++ + H I TS+ SK AG +CN D + D AG +++GH D +V
Sbjct: 260 ELM-VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAG--VLAGH-DNRV 315
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 78 (32.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 8 DPTKVVSGSC-DRTLKIWDLRSTETKFAGSSCNDLVT-YDGAGTTIISGHFDKKVRFWDF 65
D + + GS RT DL + G + LV +D +G+ SG D+++ W+
Sbjct: 23 DSSLITEGSVLQRTS---DLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNV 79
Query: 66 RAEEKVRDI--ELHGKITSLDLSKGTETKFAGSSCNDLVTYDGAGTTIISGH 115
+ K + G IT L S+ + + SS L+++D I H
Sbjct: 80 FGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKH 131
Score = 56 (24.8 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 108 GTTIISGHFDKKVRFWDFRAEEKVRDIELHGKI-TSLDLSK 147
GT + G D ++ WD R ++ H I TSL +SK
Sbjct: 189 GTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISK 229
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 179 GSIDGNIYVWDCNTEQVEAVL 199
GS D N+YVW T + VL
Sbjct: 287 GSSDKNVYVWSA-TGDLRYVL 306
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 109 (43.4 bits), Expect = 0.00093, P = 0.00093
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 11 KVVSGSCDRTLKIWDLR---STETKFAGSSCNDLVTYDGAGTTIISGHFDKKVRFWDFRA 67
++++GS D ++K+WDLR +T T A +S V D AG ++S FD ++ W
Sbjct: 394 EMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTG 453
Query: 68 EEKVRDIELHG-KITSLDLS 86
+ +R ++ H +I +D+S
Sbjct: 454 WQPLRQLQGHDTRILCVDIS 473
>UNIPROTKB|I3LBR8 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074981 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 EMBL:FP312783
Ensembl:ENSSSCT00000028839 OMA:HHSAHIT Uniprot:I3LBR8
Length = 427
Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
Identities = 41/145 (28%), Positives = 66/145 (45%)
Query: 8 DPTKVV--SGSCDRTLKIWDL----RSTETKFAGSSCNDLVTYDGAGTTIISGHFDKKVR 61
+PTK V S S DRT+++WD+ R+TET A +S VT+ G + + ++
Sbjct: 17 NPTKSVLASASWDRTVRLWDMADSWRTTET-LALTSDALAVTFRPDGAELAVATLNSQIT 75
Query: 62 FWDFRAEEKVRDIELHGKITS--LDLSKGTETKFAGSSCNDLVTYDGAGTTIISGHFDKK 119
FWD + IE + S +L K T A + Y G ++++G K
Sbjct: 76 FWDPENAVQTGSIEGRHDLKSGRKELDKITAKHSAKGKAFTALCYSADGQSVLAGGRSKF 135
Query: 120 VRFWDFRAEEKVRDIELHGKITSLD 144
V + R + + E+ G + SLD
Sbjct: 136 VCIYHVREQILRKRFEISGNL-SLD 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 191 0.00094 110 3 11 22 0.44 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 168
No. of states in DFA: 587 (62 KB)
Total size of DFA: 164 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.71u 0.06s 17.77t Elapsed: 00:00:14
Total cpu time: 17.74u 0.07s 17.81t Elapsed: 00:00:17
Start: Thu Aug 15 12:28:27 2013 End: Thu Aug 15 12:28:44 2013
WARNINGS ISSUED: 1