BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8892
(1183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/507 (39%), Positives = 293/507 (57%), Gaps = 28/507 (5%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPLFVSYMVDTDFNWGYK 716
EYDFIVIG GS GSV+A+RL+E P W VLL+EAG +E + +P + +D ++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 717 TEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVL 776
TE + C +Q C WPRGK +GGTSV+N M+Y RG +D+D+W A GNPGWSY+DVL
Sbjct: 124 TEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVL 183
Query: 777 PYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD-HCENP 835
P+FKKSED G+ YH GG L V + + PLS A L+AG E+G+ D + +N
Sbjct: 184 PFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQDLNGQNS 243
Query: 836 IGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKN 895
GF G R S+++AF+RP R R+NL + VTK+LI P TK GVE S
Sbjct: 244 TGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKNVVGVEVSDQ 303
Query: 896 RKSY-TVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNI-PVIQDLKVGYNMQDHLS 953
S + +KEVI+S G +NSPQ+L+LSGVGP+ L+++N+ PV VG N+ +H++
Sbjct: 304 FGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGKNLHNHVA 363
Query: 954 MAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPD 1013
+ N + ++ M++L+ G ++ G ++ A T++A+ PN PD
Sbjct: 364 -----YFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKMATRWADRPNLPD 418
Query: 1014 MEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLS 1073
+++ FG + G + ++L + + A I P ++ P+ S
Sbjct: 419 LQLYFGGYLASCARTGQVGELLSNNSR-------------AIQIFPAVLNPK-------S 458
Query: 1074 RGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKYASKLLPVKFP 1133
RG++ LRS++P D P+ + NYL+D RD+ L+E IK A+ LS+T +++Y +L
Sbjct: 459 RGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDKTVVK 518
Query: 1134 GCEPYEFRSDEYWACAARQLTTNLHHQ 1160
GCE + F SD YW CA RQ T +HQ
Sbjct: 519 GCESHAFASDAYWECAVRQNTGPENHQ 545
Score = 280 bits (715), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 258/541 (47%), Gaps = 106/541 (19%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGYT 106
EYDFIV+G GS GSVVA+RL+E W VLL+EAG +E + +IP + + SD ++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
TE C QRC WPRGKV +GGT
Sbjct: 124 TEPERMACLSSMEQRCYWPRGKV---------------------------------LGGT 150
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYLK 226
SV N M+Y RG DYD WAA GN GWS+++VLP+FKKSED + + YH GG L
Sbjct: 151 SVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVLPFFKKSEDNLELDAVGTEYHAKGGLLP 210
Query: 227 IERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYVLANTGNGERYSASRAFLRPIR 286
+ + + PL+ +L AG EMG+ + D + N+ GF NG RYS++RAFLRP R
Sbjct: 211 VGKFPYNPPLSYALLKAGEEMGFSVQDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPAR 270
Query: 287 KRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKN-KQRHTVRARKEVILSAGALNSPQL 345
R NL + VTKVLI + K GVE + +KEVI+S GA+NSP
Sbjct: 271 MRNNLHILLNTTVTKVLI--HPGTKNVVGVEVSDQFGSMRKILVKKEVIVSGGAVNSP-- 326
Query: 346 LMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPR 405
++L+LSG+GP+
Sbjct: 327 -------------------------------------------------QILLLSGVGPK 337
Query: 406 DHLEEMNI-PVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQG 464
+ L+++N+ PV VG NL +HV+ + N + ++ ++Y R G
Sbjct: 338 EDLQKVNVRPVHHLPGVGKNLHNHVA-----YFTNFFIDDADTAPLNWATAMEYLLFRDG 392
Query: 465 PYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVYQ 524
+ G ++ A +++++ + PD++L FG + G + LL + +
Sbjct: 393 LMSGTGISDVTAKMATRWADRPNLPDLQLYFGGYLASCARTGQVGELLSNNSR------- 445
Query: 525 PYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMCALF 584
A I P +L P SRG++ LRS++P D P+ + NYL+D RD+ L+E IK
Sbjct: 446 ------AIQIFPAVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRL 499
Query: 585 S 585
S
Sbjct: 500 S 500
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 357 bits (915), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 288/507 (56%), Gaps = 28/507 (5%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPLFVSYMVDTDFNWGYK 716
EYDFIVIG GS GSV+A+RL+E P W VLL+EAG +E + +P + +D ++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 717 TEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVL 776
TE + C +Q C WPRGK +GGTSV+N M+Y RG +D+D+W A GNPGW+Y DVL
Sbjct: 124 TEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVL 183
Query: 777 PYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD-HCENP 835
P+FKKSED G+ YH GG L V + + PLS A L+AG ELG+ D + +N
Sbjct: 184 PFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNS 243
Query: 836 IGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKN 895
GF G R S+++AF+RP R R+NL + TKILI P TK GVE S
Sbjct: 244 TGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQ 303
Query: 896 RKSY-TVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDHLS 953
S + +KEV+LSAG +NSP +L+LSGVGP+ L+++N+ + +L VG N+ +H++
Sbjct: 304 FGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVT 363
Query: 954 MAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPD 1013
+ N + ++ M++L+ G ++ G ++ A T+YA+ P PD
Sbjct: 364 -----YFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKLATRYADSPERPD 418
Query: 1014 MEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLS 1073
+++ FG + G + ++L + + + I P ++ PR S
Sbjct: 419 LQLYFGGYLASCARTGQVGELLSNNSR-------------SIQIFPAVLNPR-------S 458
Query: 1074 RGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKYASKLLPVKFP 1133
RGF+ LRS++P + P+ NYL+ +D+ L+E IK + LS+T +++Y +L
Sbjct: 459 RGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVK 518
Query: 1134 GCEPYEFRSDEYWACAARQLTTNLHHQ 1160
GCE + F SD YW CA RQ T +HQ
Sbjct: 519 GCEAHAFGSDAYWECAVRQNTGPENHQ 545
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 262/541 (48%), Gaps = 106/541 (19%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGYT 106
EYDFIV+G GS GSVVA+RL+E W VLL+EAG +E + +IP + + SD ++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
TE C QRC WPRGKV+GGTSV N M+Y RG DYD WAA
Sbjct: 124 TEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAAD----------- 172
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYLK 226
GN GW++ +VLP+FKKSED + + YH GG L
Sbjct: 173 ----------------------GNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHAKGGLLP 210
Query: 227 IERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYVLANTGNGERYSASRAFLRPIR 286
+ + + PL+ +L AG E+G+ + D + N+ GF NG RYS++RAFLRP R
Sbjct: 211 VGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPAR 270
Query: 287 KRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKN-KQRHTVRARKEVILSAGALNSPQL 345
R NL + TK+LI + + K GVE + +KEV+LSAGA+NSP +
Sbjct: 271 MRNNLHILLNTTATKILI--HPHTKNVLGVEVSDQFGSTRKILVKKEVVLSAGAVNSPHI 328
Query: 346 LMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGP 404
L+LSG+GP+D L+++N+ + +L VG NL +HV+ + N
Sbjct: 329 LLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVT-----YFTN---------------- 367
Query: 405 RDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQG 464
F ++D+ T + Y++ FR G
Sbjct: 368 -------------------------------FFIDDADTAPLNWATAMEYLL---FR-DG 392
Query: 465 PYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVYQ 524
+ G ++ A +++++ + RPD++L FG + G + LL + +
Sbjct: 393 LMSGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCARTGQVGELLSNNSR------- 445
Query: 525 PYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMCALF 584
+ I P +L P SRGF+ LRS++P + P+ NYL+ +D+ L+E IK
Sbjct: 446 ------SIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRL 499
Query: 585 S 585
S
Sbjct: 500 S 500
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 237/494 (47%), Gaps = 69/494 (13%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPL---------FVSYMV 707
EY ++V+GAGS G V+A RLTE+P VLLLEAG ++ L L V+ +
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLC 99
Query: 708 DTDFNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGN 767
D +NW Y TE RG+ + WPRG+ GG+S +N MVY RG +D++ W+ G
Sbjct: 100 DDRYNWCYHTEVQ----RGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGA 155
Query: 768 PGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYD 827
GW Y LPYF+K++ L S Y G G L+V + PL AFLEA + GY
Sbjct: 156 RGWDYAHCLPYFRKAQG---HELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYP 212
Query: 828 QVDHCE--NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITK 885
+ GF ++ G R SA+ A++ P R NLK E V+++L +
Sbjct: 213 LTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE--GT 270
Query: 886 RTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-V 944
R GVE+ KN +S+ KEVILS G +NSPQLLMLSG+G L++L IPV+ L V
Sbjct: 271 RAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGV 330
Query: 945 GYNMQDHLSMAGLVFLVNSSVT--IVESKYTKP--------RYLMDFLVNGAGPLTLPGG 994
G N+QDHL + + + T I KP +L F GA GG
Sbjct: 331 GQNLQDHLEI-----YIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGG 385
Query: 995 AEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREA 1054
+ HPD++ F P + D G R ++EA
Sbjct: 386 F-------IRSQPGVPHPDIQFHFLPSQVI-DHG------------------RVPTQQEA 419
Query: 1055 YSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVEL 1114
Y V V P RG S G++KLRS+NP D P PNYLS D++ +K+ E+
Sbjct: 420 YQ---VHVGP-MRG---TSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREI 472
Query: 1115 SETRAMQKYASKLL 1128
A+ + K L
Sbjct: 473 FAQEALAPFRGKEL 486
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 179/346 (51%), Gaps = 55/346 (15%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPL---------FVSHI 96
+EY ++VVG+GS G V+A RLTE+ VLLLEAGP++++ L V+++
Sbjct: 39 DEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANL 98
Query: 97 VSSDFNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPK 156
+NW Y TE + +G+ + WPRG+V W
Sbjct: 99 CDDRYNWCYHTE----VQRGLDGRVLYWPRGRV----------------------W---- 128
Query: 157 IPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSS 216
GG+S N MVY RG DY+ W G GW + LPYF+K++ EL +S
Sbjct: 129 -------GGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGH---ELGAS 178
Query: 217 PYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERY 275
Y G G L++ R PL L+A + GY + D + GF ++ G+R+
Sbjct: 179 RYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRW 238
Query: 276 SASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVIL 335
SA+ A+L P R NLK V++VL + RA GVE+ KN Q H A KEVIL
Sbjct: 239 SAACAYLHPALSRTNLKAEAETLVSRVLFEGT----RAVGVEYVKNGQSHRAYASKEVIL 294
Query: 336 SAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM 380
S GA+NSPQLLMLSGIG D L+++ IPV+ L VG NLQDH+ +
Sbjct: 295 SGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEI 340
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 242/494 (48%), Gaps = 65/494 (13%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPL---------FVSY 705
+ EY FIV+GAGS G V+ANRLTE+PN VLLLEAG ++ L+ L V+
Sbjct: 43 KDEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVAN 102
Query: 706 MVDTDFNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL 765
+ D +NW Y TE G+ + WPRG+ GG+S +N MVY RG +D++ W
Sbjct: 103 LCDDKYNWYYHTEAQP----GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQ 158
Query: 766 GNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELG 825
G GW Y LPYF+K++ L + Y G G L V + PL AFL+A + G
Sbjct: 159 GAEGWDYAHCLPYFRKAQK---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAG 215
Query: 826 YDQVDHCE--NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPI 883
Y + GF ++ +G R S + A++RP R NL+ + V+++L +
Sbjct: 216 YPFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE-- 273
Query: 884 TKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK 943
R GVE+ K+ +S+ +EVILS G +NSPQLLMLSGVG L++L IPV+ L
Sbjct: 274 GTRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLP 333
Query: 944 -VGYNMQDHLSMAGLVFLVNSSVTIVESKYTKP--------RYLMDFLVNGAGPLTLPGG 994
VG N+QDHL + + +T+ ++ KP +L F +GA GG
Sbjct: 334 GVGQNLQDHLEIY-IQHACTQPITLHSAQ--KPLRKVCIGLEWLWRFTGDGATAHLETGG 390
Query: 995 AEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREA 1054
F ++ HPD++ F P + D G R ++EA
Sbjct: 391 -----FIRSRPGVP--HPDIQFHFLPSQVI-DHG------------------RKPTQQEA 424
Query: 1055 YSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVEL 1114
Y + +R S G++KLRS+NP D P PNYLS D++ + +K+ E+
Sbjct: 425 YQVHVGTMRA-------TSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREI 477
Query: 1115 SETRAMQKYASKLL 1128
A + K L
Sbjct: 478 FAQEAFAPFRGKEL 491
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 179/346 (51%), Gaps = 55/346 (15%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPL---------FVSHI 96
+EY FIVVG+GS G V+ANRLTE+ N VLLLEAGP+++++ L V+++
Sbjct: 44 DEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANL 103
Query: 97 VSSDFNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPK 156
+NW Y TE G+ + WPRG+V W
Sbjct: 104 CDDKYNWYYHTEAQ----PGLDGRVLYWPRGRV----------------------W---- 133
Query: 157 IPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSS 216
GG+S N MVY RG DY+ W G GW + LPYF+K++ EL ++
Sbjct: 134 -------GGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKH---ELGAN 183
Query: 217 PYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERY 275
Y G G L + R PL + L A + GY D + GF ++ G+R+
Sbjct: 184 MYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQGKRW 243
Query: 276 SASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVIL 335
S + A+LRP RPNL+ + V++VL + RA GVE+ K+ Q H +EVIL
Sbjct: 244 STASAYLRPALSRPNLRAEVQTLVSRVLFEGT----RAVGVEYIKDGQSHKAYVSREVIL 299
Query: 336 SAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM 380
S GA+NSPQLLMLSG+G D L+++ IPV+ L VG NLQDH+ +
Sbjct: 300 SGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEI 345
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3 SV=1
Length = 528
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 247/476 (51%), Gaps = 49/476 (10%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTDFN 712
+ + D++V+G GS G+V+A+RL+ +P TV+ LEAG R+++ VP S + ++ +
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSY 772
W Y TE + + WPRGK +GG+S +N M++ RG D+D W A P WSY
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 773 RDVLPYFKKSEDISVS-RLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD- 830
DVL YF++ E+++ + G+ G L + + ++AA+L A E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARP 176
Query: 831 HCENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGV 890
+ P GF + + RGAR S + A+++P +R NL+V A T+++ID R GV
Sbjct: 177 NSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVID--GDRAVGV 234
Query: 891 EFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVI-QDLKVGYNMQ 949
E+ + ++ V R+EV+L AG +NSPQLLMLSG+G R HL E +I + +VG N+
Sbjct: 235 EYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLL 294
Query: 950 DHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
DHL + S+ E KP L+ +L+ G LT G EA F ++ +
Sbjct: 295 DHLVTVLGFDVEKDSLFAAE----KPGQLISYLLRRRGMLTSNVG-EAYGFVRSR--PEL 347
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIV--PVLVRPRSR 1067
PD+E++F P FY++ P A + +V P+LV P+
Sbjct: 348 KLPDLELIFAPA------------------PFYDEALVPPA---GHGVVFGPILVAPQ-- 384
Query: 1068 GFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLD--VLIEAIKMAVELSETRAMQ 1121
SRG + LRS++P P P YLSD +D ++ +++ +++ R ++
Sbjct: 385 -----SRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLR 435
Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 247/543 (45%), Gaps = 127/543 (23%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP-EEIILDEIPLFVSHIVSSDFNWGY 105
+ D++VVG+GS G+VVA+RL+ + TV+ LEAGP ++ +P S + S+ +W Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
TE + + WPRGKV+GG+S N M++ RG DYD WAA P
Sbjct: 64 LTEPQ----PELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPR------ 113
Query: 166 TSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTA-ELKSSPYHGVGGY 224
WS+ +VL YF++ E++ A S GV G
Sbjct: 114 ---------------------------WSYADVLGYFRRIENVTAAWHFVSGDDSGVTGP 146
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYVLANTGNGERYSASRAFLRP 284
L I R + L A E G+ P+ P GF + G R+S + A+L+P
Sbjct: 147 LHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPEGFCETVVTQRRGARFSTADAYLKP 206
Query: 285 IRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQ 344
+R NL+V A T+V+ID + RA GVE+ + Q V AR+EV+L AGA+NSPQ
Sbjct: 207 AMRRKNLRVLTGATATRVVIDGD----RAVGVEYQSDGQTRIVYARREVVLCAGAVNSPQ 262
Query: 345 LLMLSGIGPRDHLEEMNIPVI-QDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIG 403
LLMLSGIG RDHL E +I + +VG NL DH+ VT+
Sbjct: 263 LLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLLDHL------------VTV---------- 300
Query: 404 PRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQ 463
+G++++ DS+ E KP ++ Y RR+
Sbjct: 301 -----------------LGFDVE------------KDSLFAAE----KPGQLISYLLRRR 327
Query: 464 GPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVY 523
G TS G E + S+ E PD+EL+F P FY +
Sbjct: 328 GMLTSNVG-EAYGFVRSRPE--LKLPDLELIFAPA------------------PFYDEAL 366
Query: 524 QPYFERQAYNIV--PLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLD--VLIEAIK 579
P + +V P+++ P SRG + LRS++P P P YLSD +D ++ ++
Sbjct: 367 VPP---AGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLR 423
Query: 580 MCA 582
+CA
Sbjct: 424 ICA 426
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 247/476 (51%), Gaps = 49/476 (10%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTDFN 712
+ + D++V+G GS G+V+A+RL+ +P TV+ LEAG R+++ VP S + ++ +
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSY 772
W Y TE + + WPRGK +GG+S +N M++ RG D+D W A P WSY
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 773 RDVLPYFKKSEDISVS-RLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD- 830
DVL YF++ E+++ + G+ G L + + ++AA+L A E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARP 176
Query: 831 HCENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGV 890
+ P GF + + RGAR S + A+++P +R NL+V A T+++ID R GV
Sbjct: 177 NSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVID--GDRAVGV 234
Query: 891 EFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVI-QDLKVGYNMQ 949
E+ + ++ V R+EV+L AG +NSPQLLMLSG+G R HL E +I + +VG N+
Sbjct: 235 EYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLL 294
Query: 950 DHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
DHL + S+ E KP L+ +L+ G LT G EA F ++ +
Sbjct: 295 DHLVTVLGFDVEKDSLFAAE----KPGQLISYLLRRRGMLTSNVG-EAYGFVRSR--PEL 347
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIV--PVLVRPRSR 1067
PD+E++F P FY++ P A + +V P+LV P+
Sbjct: 348 KLPDLELIFAPA------------------PFYDEALVPPA---GHGVVFGPILVAPQ-- 384
Query: 1068 GFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLD--VLIEAIKMAVELSETRAMQ 1121
SRG + LRS++P P P YLSD +D ++ +++ +++ R ++
Sbjct: 385 -----SRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLR 435
Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 247/543 (45%), Gaps = 127/543 (23%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP-EEIILDEIPLFVSHIVSSDFNWGY 105
+ D++VVG+GS G+VVA+RL+ + TV+ LEAGP ++ +P S + S+ +W Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
TE + + WPRGKV+GG+S N M++ RG DYD WAA P
Sbjct: 64 LTEPQ----PELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPR------ 113
Query: 166 TSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTA-ELKSSPYHGVGGY 224
WS+ +VL YF++ E++ A S GV G
Sbjct: 114 ---------------------------WSYADVLGYFRRIENVTAAWHFVSGDDSGVTGP 146
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYVLANTGNGERYSASRAFLRP 284
L I R + L A E G+ P+ P GF + G R+S + A+L+P
Sbjct: 147 LHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPEGFCETVVTQRRGARFSTADAYLKP 206
Query: 285 IRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQ 344
+R NL+V A T+V+ID + RA GVE+ + Q V AR+EV+L AGA+NSPQ
Sbjct: 207 AMRRKNLRVLTGATATRVVIDGD----RAVGVEYQSDGQTRIVYARREVVLCAGAVNSPQ 262
Query: 345 LLMLSGIGPRDHLEEMNIPVI-QDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIG 403
LLMLSGIG RDHL E +I + +VG NL DH+ VT+
Sbjct: 263 LLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLLDHL------------VTV---------- 300
Query: 404 PRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQ 463
+G++++ DS+ E KP ++ Y RR+
Sbjct: 301 -----------------LGFDVE------------KDSLFAAE----KPGQLISYLLRRR 327
Query: 464 GPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVY 523
G TS G E + S+ E PD+EL+F P FY +
Sbjct: 328 GMLTSNVG-EAYGFVRSRPE--LKLPDLELIFAPA------------------PFYDEAL 366
Query: 524 QPYFERQAYNIV--PLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLD--VLIEAIK 579
P + +V P+++ P SRG + LRS++P P P YLSD +D ++ ++
Sbjct: 367 VPP---AGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLR 423
Query: 580 MCA 582
+CA
Sbjct: 424 ICA 426
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 243/498 (48%), Gaps = 69/498 (13%)
Query: 653 IFEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPL---------FV 703
+ + EY F+V+GAGS G V+A+RLTE+PN VLLLEAG ++ L+ L V
Sbjct: 38 VGKDEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALV 97
Query: 704 SYMVDTDFNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWE 763
S + D +NW Y TE GM + WPRG+ GG+S +N MVY RG +D++ W
Sbjct: 98 SNLCDDKYNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWH 153
Query: 764 ALGNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSE 823
G GW Y LPYF+K++ L + Y G G L V + PL AFL+A +
Sbjct: 154 REGAEGWDYAHCLPYFRKAQR---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQ 210
Query: 824 LGYDQVDHCE--NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILID 881
GY + GF ++ +G R S + A++ P+ R NL+ + V+++L +
Sbjct: 211 AGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE 270
Query: 882 PITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQD 941
R GVE+ K+ + + +EVILS G +NSPQLLMLSGVG L +L+IPV+
Sbjct: 271 --GTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCH 328
Query: 942 LK-VGYNMQDHLSMAGLVFLVNSSVT--IVESKYTKP--------RYLMDFLVNGAGPLT 990
L VG N+QDHL + V + T I KP +L + +GA
Sbjct: 329 LPGVGQNLQDHLEV-----YVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHL 383
Query: 991 LPGGAEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFA 1050
GG F ++ HPD++ F P + D G R
Sbjct: 384 ETGG-----FIRSRPGVP--HPDIQFHFLPSQVI-DHG------------------RKPT 417
Query: 1051 EREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 1110
++EAY + +R S G++KLRS+NP D P +PNYLS D++ + +++
Sbjct: 418 QQEAYQVHVGTMRA-------TSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRL 470
Query: 1111 AVELSETRAMQKYASKLL 1128
+ E+ A+ + K L
Sbjct: 471 SREIFAQEALAPFRGKEL 488
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 181/346 (52%), Gaps = 55/346 (15%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPL---------FVSHI 96
+EY F+VVG+GS G V+A+RLTE+ N VLLLEAGP+++++ L VS++
Sbjct: 41 DEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNL 100
Query: 97 VSSDFNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPK 156
+NW Y TE GM ++ WPRG+V W
Sbjct: 101 CDDKYNWYYHTEPQ----PGMDSRVLYWPRGRV----------------------W---- 130
Query: 157 IPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSS 216
GG+S N MVY RG DY+ W G GW + LPYF+K++ EL ++
Sbjct: 131 -------GGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCLPYFRKAQ---RHELGAN 180
Query: 217 PYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERY 275
Y G G L + R PL + L A + GY D + GF ++ G+R+
Sbjct: 181 MYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRW 240
Query: 276 SASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVIL 335
S + A+L P+ RPNL+ + V++VL + RA GVE+ K+ QRH +EVIL
Sbjct: 241 STACAYLHPVLSRPNLRAEVQTLVSRVLFEGT----RAVGVEYIKDGQRHKAYVSREVIL 296
Query: 336 SAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM 380
S GA+NSPQLLMLSG+G D L +++IPV+ L VG NLQDH+ +
Sbjct: 297 SGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEV 342
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 243/476 (51%), Gaps = 48/476 (10%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTD-FNWGY 715
YD+I++GAGS G V+ANRL+ +P+ V LLEAG R+ + L +PL ++ + ++ NW +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 716 KTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDV 775
+T + +++++ WPRGK +GG+S IN MVY RG +D+ WE G W ++
Sbjct: 62 QTAPQQH----LNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRA 117
Query: 776 LPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSE--LGYDQVDHCE 833
FKK E R S YHG G L V PLS +F++AG E + ++ +
Sbjct: 118 FALFKKLE--HNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGA 175
Query: 834 NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFS 893
+ G + + G R S+++AF+ + R NL + EA TK+L + ++ GV +
Sbjct: 176 HQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFE--DRKAVGVSYI 233
Query: 894 KNRKSYTVKCRK--EVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQD 950
+ VK EVILS G +N+PQLLMLSGVG L+E I ++ DL +VG N+QD
Sbjct: 234 QKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQD 293
Query: 951 HLSMAGLVFLVNSSVTIVESKYTKPRYLM---DFLVNGAGPLTLPGGAEALAFYPTKYAE 1007
HL + L+ NS I + PR L+ ++ G LT AE+ F K +
Sbjct: 294 HLDIT-LMCAANSRTPIGVAFSFIPRGLVGLFSYIFKRKGFLT-SNVAESGGF--VKSSP 349
Query: 1008 DPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSR 1067
+ + P+++ F P L D G R A Y++ + P+
Sbjct: 350 ERDRPNLQFHFLPTYLK-DHG------------------RKIAVGYGYTLHICDLLPK-- 388
Query: 1068 GFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG + L+S+NP D P PNYLSD D+ +I IK+ + + +M K+
Sbjct: 389 -----SRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKH 439
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 236/541 (43%), Gaps = 124/541 (22%)
Query: 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSS-DFNWGY 105
YD+I+VG+GS G V+ANRL+ + + V LLEAGP + L +PL ++ + +S NW +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
T + + + WPRGK +GG+S N MVY RG H+ D
Sbjct: 62 QTAPQ----QHLNERSLFWPRGKTLGGSSSINAMVYIRG--HEED--------------- 100
Query: 166 TSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYL 225
Y W G W ++ FKK E S YHG G L
Sbjct: 101 ----------------YQAWEQAGGEYWGWKRAFALFKKLE--HNQRFDKSNYHGTDGEL 142
Query: 226 KIERPLWRTPLAKCVLDAGHEMGYDI---VDPSEPNAIGFSYVLANTGNGERYSASRAFL 282
+ PL+K + AG E + + +GF V +G+R+S++RAFL
Sbjct: 143 AVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVGFYQVTQK--HGQRWSSARAFL 200
Query: 283 RPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARK--EVILSAGAL 340
+ RPNL + A TKVL ++ ++A GV + + V+ EVILS GA+
Sbjct: 201 HDVIDRPNLDIITEAHATKVLFED----RKAVGVSYIQKNMHQQVKTTDSGEVILSLGAV 256
Query: 341 NSPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLML 399
N+PQLLMLSG+G L+E I ++ DL +VG NLQDH+ + L+ N I +
Sbjct: 257 NTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLDIT-LMCAANSRTPIG--VAF 313
Query: 400 SGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYW 459
S I PR GLV L + Y
Sbjct: 314 SFI-PR---------------------------GLVGLFS------------------YI 327
Query: 460 FRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFY 519
F+R+G TS AE+ + S E D RP+++ F P L
Sbjct: 328 FKRKGFLTS-NVAESGGFVKSSPERD--RPNLQFHFLPTYLKDHG--------------- 369
Query: 520 RKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIK 579
RK+ Y Y + L P SRG + L+S+NP D P PNYLSD D+ +I IK
Sbjct: 370 RKIAVGY----GYTLHICDLLPKSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIK 425
Query: 580 M 580
+
Sbjct: 426 I 426
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG
22486) GN=betA PE=3 SV=1
Length = 566
Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+PN TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHQGLERW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYF+K+E V + YHG G + V + PL A +EAG + GY +
Sbjct: 120 TYLDCLPYFRKAETRDVG---PNDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IP++ DL VG
Sbjct: 235 ASGVAYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + RSD+ R H C
Sbjct: 445 RGREL---NPGA---DCRSDKELDTFVRARAETAFHPSC 477
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 205/427 (48%), Gaps = 70/427 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ N TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNIG-WSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYF+K+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHQGLERWTYLDCLPYFRKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + +++AG + GY D + GF + T G R S
Sbjct: 145 DGPVSVTTSKP-GANPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKTRPNLEIVTHALADRILFDG----KRASGVAYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IP++ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVT 443
+ + + +L +G+G +H E D N+Q H + + N S
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINY--NGSNA 377
Query: 444 IVESQFQ 450
I FQ
Sbjct: 378 IEMHGFQ 384
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 239/476 (50%), Gaps = 48/476 (10%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTD-FNWGY 715
YD+I++GAGS G V+ANRL+ +P+ V LLEAG R+ + L +PL ++ + ++ NW +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 716 KTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDV 775
+T + ++ ++ WPRGK +GG+S IN MVY RG D+ WE W +
Sbjct: 62 QTAPQQN----LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRA 117
Query: 776 LPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSE--LGYDQVDHCE 833
L FK+ E R S +HG+ G L V + PLS AF++AG E + ++ + E
Sbjct: 118 LELFKRLE--CNQRFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGE 175
Query: 834 NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFS 893
G + + G R S+++AF+ + R NL + +A +KIL + ++ GV +
Sbjct: 176 YQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFE--DRKAVGVSYI 233
Query: 894 KNRKSYTVKCRK--EVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQD 950
K + VK EV+LS G + +P LLMLSGVG L+E + ++ DL +VG N+QD
Sbjct: 234 KKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQD 293
Query: 951 HLSMAGLVFLVNSSVTIVESKYTKPR---YLMDFLVNGAGPLTLPGGAEALAFYPTKYAE 1007
HL + L+ NS I + PR L ++ G LT AE+ F K +
Sbjct: 294 HLDIT-LMCAANSREPIGVALSFIPRGVSGLFSYVFKREGFLT-SNVAESGGF--VKSSP 349
Query: 1008 DPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSR 1067
D + P+++ F P L D G R A Y++ + P+
Sbjct: 350 DRDRPNLQFHFLPTYLK-DHG------------------RKIAGGYGYTLHICDLLPK-- 388
Query: 1068 GFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG + L+S+NP P PNYLSD D+ +I IK+ + + +M K+
Sbjct: 389 -----SRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKH 439
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 233/544 (42%), Gaps = 130/544 (23%)
Query: 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII-LDEIPLFVSHIVSSD-FNWGY 105
YD+I+VG+GS G V+ANRL+ + + V LLEAGP + L +PL ++ + +S NW +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
T + + + WPRGK + GG
Sbjct: 62 QTAPQ----QNLNGRSLFWPRGKTL---------------------------------GG 84
Query: 166 TSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYL 225
+S N MVY RG DY W W + L FK+ E S +HGV G L
Sbjct: 85 SSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRALELFKRLE--CNQRFDKSEHHGVDGEL 142
Query: 226 KIERPLWRTPLAKCVLDAGHEMGYDI---VDPSEPNAIGFSYVLANTGNGERYSASRAFL 282
+ + PL+K + AG E + + + +GF V NG+R+S++RAFL
Sbjct: 143 AVSDLKYINPLSKAFVQAGMEANINFNGDFNGEYQDGVGFYQVTQK--NGQRWSSARAFL 200
Query: 283 RPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARK--EVILSAGAL 340
+ RPNL + A +K+L ++ ++A GV + K H V+ EV+LS GA+
Sbjct: 201 HGVLSRPNLDIITDAHASKILFED----RKAVGVSYIKKNMHHQVKTTSGGEVLLSLGAV 256
Query: 341 NSPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLML 399
+P LLMLSG+G L+E + ++ DL +VG NLQDH+ +
Sbjct: 257 GTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQDHLDIT------------------ 298
Query: 400 SGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYI---V 456
L N ++ + +A L F+ PR +
Sbjct: 299 -------------------LMCAANSREPIGVA-LSFI--------------PRGVSGLF 324
Query: 457 DYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISD 516
Y F+R+G TS AE+ + S D+ RP+++ F P L
Sbjct: 325 SYVFKREGFLTS-NVAESGGFVKS--SPDRDRPNLQFHFLPTYLKDHG------------ 369
Query: 517 KFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIE 576
RK+ Y Y + L P SRG + L+S+NP P PNYLSD D+ +I
Sbjct: 370 ---RKIAGGY----GYTLHICDLLPKSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIA 422
Query: 577 AIKM 580
IK+
Sbjct: 423 GIKI 426
>sp|B1K707|BETA_BURCC Choline dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3)
GN=betA PE=3 SV=1
Length = 566
Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IPV+ DL VG
Sbjct: 235 ASGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDAFVRARAETAFHPSC 477
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 198/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 SGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKVRPNLEIVTHALADRILFDG----KRASGVTYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IPV+ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|A0B2F7|BETA_BURCH Choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424)
GN=betA PE=3 SV=1
Length = 566
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IPV+ DL VG
Sbjct: 235 ASGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDAFVRARAETAFHPSC 477
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 198/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 SGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKVRPNLEIVTHALADRILFDG----KRASGVTYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IPV+ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|Q1BQE2|BETA_BURCA Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054)
GN=betA PE=3 SV=1
Length = 566
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IPV+ DL VG
Sbjct: 235 ASGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDAFVRARAETAFHPSC 477
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 198/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 SGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKVRPNLEIVTHALADRILFDG----KRASGVTYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IPV+ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|Q39A44|BETA_BURS3 Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3
SV=1
Length = 566
Score = 213 bits (542), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGNGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IPV+ DL VG
Sbjct: 235 ASGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDLWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDAFVRARAETAFHPSC 477
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 199/405 (49%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 NGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKVRPNLEIVTHALADRILFDG----KRASGVTYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IPV+ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D + N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDLWPNIQYH 364
>sp|Q9X2M2|BETA_STAXY Choline dehydrogenase OS=Staphylococcus xylosus GN=betA PE=3 SV=1
Length = 560
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 237/482 (49%), Gaps = 52/482 (10%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSYMVDTD 710
++ YD+I+IG GS GSV+ RL+E+ + VL+LEAGR + LL +P + Y
Sbjct: 1 MKESYDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNK 60
Query: 711 -FNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNW-EALGNP 768
++W Y+T + M + RGK +GG+S IN M+Y RG P D++ W + G
Sbjct: 61 LYDWIYETTPEPH----MDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGME 116
Query: 769 GWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQ 828
W Y LPYFK+ E S+ KG PY G G +K+ + PL AF +AG E GY++
Sbjct: 117 SWDYAHCLPYFKRLETTFGSK-KGDPYRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNK 175
Query: 829 VDHCEN--PIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
GF + G R SAS+A++ P KR NL+V A VTK+ + +
Sbjct: 176 TPDVNGFRQEGFGPFDSQVHNGRRVSASRAYLHPAMKRKNLEVQTRAFVTKLNFE--GNK 233
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNI-PVIQDLKVG 945
GV F KN K +T + KEVILS G +NSPQLL LSG+G HL L I P I VG
Sbjct: 234 VTGVTFKKNGKEHT-ESAKEVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRIHLPGVG 292
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYP--- 1002
N +DHL V++ ++ V + + + M F+ G + GA A +
Sbjct: 293 ENFEDHLE----VYVQHACKQPVSMQPSLNKLKMPFI--GLQWILGRKGAAASNHFEGGG 346
Query: 1003 -TKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
+ +D ++P++ F P A+ Y+ P A + P+
Sbjct: 347 FVRSNDDVDYPNLMFHFLPIAVR-----------------YDGTKAPAAHGYQVHVGPMY 389
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
SRG +K++S +PF+ P+F NYLS D +EAIK+A + + +A+
Sbjct: 390 SN---------SRGHLKIKSKDPFEKPEFVFNYLSTEEDKREWVEAIKVARNILKQKALD 440
Query: 1122 KY 1123
+
Sbjct: 441 PF 442
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 170/338 (50%), Gaps = 42/338 (12%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGY 105
E YD+I++G GS GSV+ RL+E+ + VL+LEAG SD+ W
Sbjct: 3 ESYDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAG-----------------RSDYPWDL 45
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
+ + N+ +W + T PH DG GKV+GG
Sbjct: 46 LIQMPAALMYPAGNKLYDW--------------IYETTPEPH-MDGRKVGHA-RGKVLGG 89
Query: 166 TSVTNYMVYTRGVPHDYDGWAA-LGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
+S N M+Y RG P DY+ WA G W + LPYFK+ E ++ K PY G G
Sbjct: 90 SSSINGMIYQRGNPMDYEKWAKPEGMESWDYAHCLPYFKRLETTFGSK-KGDPYRGHHGP 148
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
+K+ R PL + DAG E GY+ D + GF + NG R SASRA+L
Sbjct: 149 IKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGFRQEGFGPFDSQVHNGRRVSASRAYLH 208
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR NL+V RA VTK+ + N + TGV F KN + HT A KEVILS GA+NSP
Sbjct: 209 PAMKRKNLEVQTRAFVTKLNFEGN----KVTGVTFKKNGKEHTESA-KEVILSGGAINSP 263
Query: 344 QLLMLSGIGPRDHLEEMNI-PVIQDLKVGYNLQDHVSM 380
QLL LSGIG +HL + I P I VG N +DH+ +
Sbjct: 264 QLLQLSGIGDSEHLRSLGIEPRIHLPGVGENFEDHLEV 301
>sp|A9AMZ9|BETA_BURM1 Choline dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616
/ 249) GN=betA PE=3 SV=1
Length = 566
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 255/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+PN TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHQGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E + + YHG G + V + PL A +EAG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDIGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
+ + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 EDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+EL+IP++ DL VG
Sbjct: 235 ASGVTYLRGNERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DLKSDKELDAFVRARAETAFHPSC 477
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/427 (31%), Positives = 205/427 (48%), Gaps = 70/427 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ N TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAA-LGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD WA G W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWATHQGLENWTYLDCLPYFKKAE---TRDIGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + +++AG + GY D + GF + T G R S
Sbjct: 145 DGPVSVTTSKP-GVNPLFEAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKTRPNLEIVTHALADRILFDG----KRASGVTYLRGNERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IP++ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVT 443
+ + + +L +G+G +H E D N+Q H + + N S
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINY--NGSNA 377
Query: 444 IVESQFQ 450
I FQ
Sbjct: 378 IEMHGFQ 384
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=betA PE=3 SV=1
Length = 566
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 245/485 (50%), Gaps = 51/485 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKARPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + T R+EV++ +G + SPQLL SGVGP L+ L+IPV+ DL VG
Sbjct: 235 ASGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKALDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P D P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLL 1128
+ L
Sbjct: 445 RGREL 449
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 197/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 SGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R T AR+EV++ +
Sbjct: 204 ARGYLDQAKARPNLEIVTHALADRILFDG----KRASGVTYLRGSERATAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+ ++IPV+ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKALDIPVVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|Q0B711|BETA_BURCM Choline dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244
/ AMMD) GN=betA PE=3 SV=1
Length = 566
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 255/519 (49%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+PN TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGNGPVSVTTSKPGANPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + + R+EV++ +G + SPQLL SGVGP L+EL+IP++ DL VG
Sbjct: 235 ASGVTYLRGSERASAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDTFVRARAETAFHPSC 477
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 198/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ N TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 NGPVSVTTSKP-GANPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R + AR+EV++ +
Sbjct: 204 ARGYLDQAKGRPNLEIVTHALADRILFDG----KRASGVTYLRGSERASAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IP++ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 237/478 (49%), Gaps = 55/478 (11%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE-AGREESLLTDVPLFVSYMVDTD-FNWG 714
+ DF++IG+GS GS +A+RL+E+ TV++LE G + +P +++ + D +NWG
Sbjct: 2 QADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPQ----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V + R PL AF+EAG + G++ + +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+++ + K++I+ R GVE
Sbjct: 175 GKQEGFGLMEQTTWMGRRWSAATAYLKPALKRPNVELIR-CFARKVVIE--NGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPV-IQDLKVGYNMQDH 951
+ K VK EVI+SA + NSP+LLMLSG+GP HL+E+ I V I VG N+QDH
Sbjct: 232 ERGGKIEIVKANSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGIEVKIDRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGA------EALAFYPTKY 1005
+ + +S+ V P Y+ + GA + G EA AF +
Sbjct: 292 MEF----YFQQTSLKPVSLYSWLPWYMQGIV--GAQWMFFKSGLGTSNQFEACAFL--RS 343
Query: 1006 AEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPR 1065
A PD++ F P A++ D K S F V Y++
Sbjct: 344 APGVKQPDIQYHFLPVAISYDG-----KAAAKSHGFQAHV--------GYNLSK------ 384
Query: 1066 SRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRSS+P P NY+S D + +++ E+ +A Y
Sbjct: 385 -------SRGAVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDY 435
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 178/336 (52%), Gaps = 49/336 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSSD-FNWG 104
+ DF+++GSGS GS +A+RL+E+ TV++LE G ++ ++P ++ +S D +NWG
Sbjct: 2 QADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV +G
Sbjct: 62 YLSEPE----PQLNNRRITAPRGKV---------------------------------IG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 85 GSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L + R R PL ++AG + G++ D + GF + T G R+SA+ A+L+
Sbjct: 142 LHVRRGDARNPLFHAFIEAGKQAGFEATEDYNGGKQEGFGLMEQTTWMGRRWSAATAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+++ R KV+I+ RATGVE + + V+A EVI+SA + NSP
Sbjct: 202 PALKRPNVELI-RCFARKVVIENG----RATGVEIERGGKIEIVKANSEVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPV-IQDLKVGYNLQDHV 378
+LLMLSGIGP HL+EM I V I VG NLQDH+
Sbjct: 257 KLLMLSGIGPGQHLQEMGIEVKIDRPGVGANLQDHM 292
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M /
ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 248/474 (52%), Gaps = 47/474 (9%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E E RG S T PRGK +GG+S IN MVY RG DFD+W G GW+Y D
Sbjct: 62 FSSEP-EPHIRGRSLVT---PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S+ + G G L V++ PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GFARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP HL+E I ++ D VG N+QDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVE--SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
L + + +T+ + ++K R +++L+ G E+ AF +K +
Sbjct: 292 LEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT-NHFESAAFVRSKAGVE- 348
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGF 1069
+PD++ F P A+ D K S F V P+ RS+
Sbjct: 349 -YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----RSK-- 384
Query: 1070 VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 385 ---SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Score = 196 bits (499), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 248/538 (46%), Gaps = 121/538 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+E+ ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+++E P + G + VT P GKV+G
Sbjct: 62 FSSE----------------PEPHIRGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W+ G GW++ +VLPYFK+ E+ + + + G G
Sbjct: 85 GSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL ++AGH+ G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GFARKIVLEG----KRAVGVEIEAGRTFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL+E I ++ D VG NLQDH+ V++
Sbjct: 257 KLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE----VYI---------------- 296
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
+E P+ K+ + + + L+F D T + F+ ++
Sbjct: 297 -----QQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT---NHFESAAFV------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRL 422
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 243/483 (50%), Gaps = 53/483 (10%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLL---TDVPLFVSY-MVDTDFN 712
EYD+I+IGAGS G+V+A RLTE + +VLLLEAG + L T +P +++ + +N
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWS 771
W Y+T+ + M+D+ RGK +GG+S+IN M Y RG DFD+W + G WS
Sbjct: 62 WAYETDPEPH----MNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWS 117
Query: 772 YRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSW-RTPLSAAFLEAGSELGYDQVD 830
Y D LPYF+K+E V + YHG G + V L A +EAG + GY + D
Sbjct: 118 YLDCLPYFRKAETRDVG---ANDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTD 174
Query: 831 HCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRT 887
+ ++ +G R S ++ ++ + R NL + A +IL D KR
Sbjct: 175 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFD--GKRA 232
Query: 888 YGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGY 946
GV + K + T K R+EV+L AG + SPQ+L SGVGP+ L+ L+I V+ DL VG
Sbjct: 233 VGVAYFKGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHDLPGVGE 292
Query: 947 NMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTK 1004
N+QDHL M L + V++ + + +P+ ++L NG G + EA F ++
Sbjct: 293 NLQDHLEMY-LQYACKEPVSLYPALQWFNQPKIGAEWLFNGTG-IGASNQFEAGGFIRSR 350
Query: 1005 YAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRP 1064
++ P+++ F P A+ + ++++ F V
Sbjct: 351 --DEFTWPNIQYHFLPVAINYNGSNAVKE-----HGFQAHV------------------- 384
Query: 1065 RSRGFVR-LSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
G +R LSRG V++RS + + P NY+S +D +AI++ E+ A+ KY
Sbjct: 385 ---GSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKY 441
Query: 1124 ASK 1126
+
Sbjct: 442 RGR 444
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 246/543 (45%), Gaps = 125/543 (23%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I++G+GS G+V+A RLTE S+ +VLLLEAG + LD ++P ++ + +N
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M ++R RGK +G
Sbjct: 62 WAYETDPE----PHMNDRRMECGRGKGLG------------------------------- 86
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG D+D WA + + WS+ + LPYF+K+E T ++ ++ YHG
Sbjct: 87 --GSSLINGMCYIRGNAMDFDHWATMSGLEDWSYLDCLPYFRKAE---TRDVGANDYHGA 141
Query: 222 GGYLKIERP-LWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSAS 278
G + + P + L +++AG + GY D + GF + T G R S +
Sbjct: 142 SGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRASTA 201
Query: 279 RAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAG 338
R +L + R NL + A ++L D KRA GV +FK + T +AR+EV+L AG
Sbjct: 202 RGYLDQAKSRKNLTIVTHALTDRILFDG----KRAVGVAYFKGESAQTAKARREVLLCAG 257
Query: 339 ALNSPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELL 397
A+ SPQ+L SG+GP+D L+ ++I V+ DL VG NLQDH+ M L + + V++
Sbjct: 258 AIASPQILQRSGVGPKDLLQRLDISVVHDLPGVGENLQDHLEMY-LQYACKEPVSLYPA- 315
Query: 398 MLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVD 457
L+ N P I G +L N + +QF+ +I
Sbjct: 316 ----------LQWFNQPKI----------------GAEWLFNGTGIGASNQFEAGGFI-- 347
Query: 458 YWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDK 517
+ ++ T P+I+ F P A+ + NGS
Sbjct: 348 -----------------------RSRDEFTWPNIQYHFLPVAI--NYNGS---------- 372
Query: 518 FYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEA 577
V + F+ + +R SRG V++RS + + P NY+S +D +A
Sbjct: 373 --NAVKEHGFQAHVGS-----MRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDA 425
Query: 578 IKM 580
I++
Sbjct: 426 IRI 428
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 250/521 (47%), Gaps = 75/521 (14%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E +V+++EAG + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEAN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ + PL AF+EAG + G++ + +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+K+ +I+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKIVY-GLAQRIVIE--DGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+N + VK +EVI+SA + NSP+LLMLSG+GP HL+++ I V D VG N+QDH
Sbjct: 232 ERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L GG EA A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGLKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRS++P P NY+S + D + +++ E+ A
Sbjct: 385 -------------SRGSVSLRSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREIFGQSA 431
Query: 1120 MQKYASKLLPVKFPGCEPYE-FRSDEYWACAARQLTTNLHH 1159
Y + P +P E +SDE R+ + +H
Sbjct: 432 FHDY-------RGPEIQPGEGVQSDEEIDAFLREHLESAYH 465
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 177/336 (52%), Gaps = 49/336 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
+ DF+++GSGS GS +A RL+E +V+++EAG + ++P ++ +S +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV +G
Sbjct: 62 YLSEPE----ANLNNRRITAPRGKV---------------------------------IG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 85 GSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL + ++AG + G++ D + GF + G R+SA+ A+L+
Sbjct: 142 LHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQEGFGLMEQTIFGGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+K+ +++I++ RATGVE +N + V+A +EVI+SA + NSP
Sbjct: 202 PALKRDNVKIVY-GLAQRIVIEDG----RATGVEIERNGRIEVVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHV 378
+LLMLSGIGP HL++M I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHM 292
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330) GN=betA
PE=3 SV=1
Length = 549
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 247/474 (52%), Gaps = 47/474 (9%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+EN ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E + + ++ PRGK +GG+S IN MVY RG DFD+W G GW+Y D
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S+ + G G L V++ PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GFARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP HL+E I ++ D VG N+QDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVE--SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
L + + +T+ + ++K R +++L+ G E+ AF +K +
Sbjct: 292 LEVY-IQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGAT-NHFESAAFVRSKAGVE- 348
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGF 1069
+PD++ F P A+ D K S F V P+ RS+
Sbjct: 349 -YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----RSK-- 384
Query: 1070 VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 385 ---SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 249/538 (46%), Gaps = 121/538 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+EN ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+++E P + G + VT P GKV+G
Sbjct: 62 FSSE----------------PEPHIGGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W+ G GW++ +VLPYFK+ E+ + + + G G
Sbjct: 85 GSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL ++AGH+ G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GFARKIVLEG----KRAVGVEIEAGRTFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL+E I ++ D VG NLQDH+ V++ + + L
Sbjct: 257 KLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE----VYIQQECTQPITL------ 306
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
E+N+ ++G L+F D T + F+ ++
Sbjct: 307 -----YSELNL--FSKARIGVEW--------LLFKTGDGAT---NHFESAAFV------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRL 422
>sp|Q2T6D0|BETA_BURTA Choline dehydrogenase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=betA PE=3 SV=1
Length = 565
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 251/519 (48%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+E+D+I+ GAGS G+V+A RLTE+P+ TVLLLEAG + T +P ++Y + +
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M+++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLEDW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYF+K+E V + YHG G + V + PL A +EAG + GY +
Sbjct: 120 TYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ RG R S ++ ++ R R NL++ A +IL KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV F T R+EV++ +G + SPQLL SGVGP L EL+IPV+ DL VG
Sbjct: 235 ATGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + F V++ + + +P+ +D+++NG G L EA F T
Sbjct: 295 RNLQDHLEMY-IQFECKEPVSLYPALKWWNQPKIGLDWMINGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDLWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKL+S +P P NY++++ D +AI+ E+ A+ ++
Sbjct: 390 MRS-----PSRGRVKLKSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMHQPALDRF 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD R H C
Sbjct: 445 RGREL---NPGA---DLKSDNELDAFVRARAETAFHPSC 477
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/543 (27%), Positives = 241/543 (44%), Gaps = 127/543 (23%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
E+D+I+ G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMNNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYF+K+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLEDWTYLDCLPYFRKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + +++AG + GY D + GF + T G R S
Sbjct: 145 DGPVSVTTSKP-GVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPRGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L R RPNL++ A ++L KRATGV F R T AR+EV++ +
Sbjct: 204 ARGYLDQARARPNLEIVTHALADRILFSG----KRATGVTFLHGSARVTAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVEL 396
GA+ SPQLL SG+GP + L E++IPV+ DL VG NLQDH+ M + F + V++
Sbjct: 260 GAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEMY-IQFECKEPVSLYPA 318
Query: 397 LMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIV 456
L+ N P I GL +++N + + F+ +I
Sbjct: 319 -----------LKWWNQPKI----------------GLDWMINGTGLGASNHFEAGGFI- 350
Query: 457 DYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISD 516
+ +D P+I+ F P A+ + + ++
Sbjct: 351 ------------------------RTRDDDLWPNIQYHFLPVAINYNGSNAI-------- 378
Query: 517 KFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIE 576
E + +R SRG VKL+S +P P NY++++ D +
Sbjct: 379 -----------EMHGFQAHVGSMRSPSRGRVKLKSRDPNAHPSILFNYMAEALDWREFRD 427
Query: 577 AIK 579
AI+
Sbjct: 428 AIR 430
>sp|B1Z034|BETA_BURA4 Choline dehydrogenase OS=Burkholderia ambifaria (strain MC40-6)
GN=betA PE=3 SV=1
Length = 566
Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 254/519 (48%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+ GAGS G+V+A RLTE+PN TVLLLEAG + T +P ++Y + +
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M ++ RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYFKK+E V + YHG G + V + PL A ++AG + GY +
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ +G R S ++ ++ + R NL++ A +IL D KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFD--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + + R+EV++ +G + SPQLL SGVGP L+EL+IP++ DL VG
Sbjct: 235 ASGVTYLRGSERANAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKLRS +P P NY++++ D +AI+ E+ A+ +Y
Sbjct: 390 MRS-----PSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD+ R H C
Sbjct: 445 RGREL---NPGA---DCKSDKELDTFVRSRAETAFHPSC 477
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 197/405 (48%), Gaps = 68/405 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I+ G+GS G+V+A RLTE+ N TVLLLEAG + D ++P +++ + +N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 65 WAYETDPE----PHMDNRRMECGRGKGLG------------------------------- 89
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG DYD W+ + W++ + LPYFKK+E T ++ + YHG
Sbjct: 90 --GSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE---TRDVGPNDYHGG 144
Query: 222 GGYLKI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSA 277
G + + +P PL + ++DAG + GY D + GF + T G R S
Sbjct: 145 DGPVSVTTSKP-GVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRAST 203
Query: 278 SRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSA 337
+R +L + RPNL++ A ++L D KRA+GV + + +R AR+EV++ +
Sbjct: 204 ARGYLDQAKGRPNLEIVTHALADRILFDG----KRASGVTYLRGSERANAHARREVLVCS 259
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGL 383
GA+ SPQLL SG+GP L+E++IP++ DL VG NLQDH+ M L
Sbjct: 260 GAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPAL 319
Query: 384 VFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ + + +L +G+G +H E D N+Q H
Sbjct: 320 KWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 237/484 (48%), Gaps = 67/484 (13%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE-AGREESLLTDVPLFVSY-MVDTDFNWG 714
+ D+I+IG+GS GS +A+RL+E+ +V++LE G + +P +++ M +NWG
Sbjct: 2 QADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DFD WE LG GW+Y D
Sbjct: 62 YLSEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ + PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEH---SHGGEDGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + RG R SA+ A+++P KR N+++ + KI+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQLIR-CFARKIVIE--NGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDH 951
+ + VK +EVI+SA + NSP+LLMLSG+GP HL++L I V D VG N+QDH
Sbjct: 232 ERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L G EA A
Sbjct: 292 MEF------------YFQQISTKPVSLYSWLPWFWQGVAGAQWLFFKSGLGISNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A+ D K + F V Y++
Sbjct: 340 F--LRSAPGVKQPDIQYHFLPVAIRYDG-----KAAANTHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LR+S+P P NY+S D + +++ E+ +A
Sbjct: 385 -------------SRGSVTLRASDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKA 431
Query: 1120 MQKY 1123
+Y
Sbjct: 432 FDQY 435
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 182/338 (53%), Gaps = 49/338 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSSD-FNWG 104
+ D+I++GSGS GS +A+RL+E+S +V++LE G +I ++P ++ +S + +NWG
Sbjct: 2 QADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV +G
Sbjct: 62 YLSEPE----PHLNNRRITAPRGKV---------------------------------IG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W LG GW++ +VLPYFK+ E E + G G
Sbjct: 85 GSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVLPYFKRMEHSHGGE---DGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL ++AG + G+++ D + GF + T G R+SA+ A+L+
Sbjct: 142 LHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNGSKQEGFGLMEQTTWRGRRWSAASAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+++ R K++I+ RATGVE + + V+A +EVI+SA + NSP
Sbjct: 202 PALKRPNVQLI-RCFARKIVIENG----RATGVEIERGGRIEVVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM 380
+LLMLSGIGP HL+++ I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDHMEF 294
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 247/474 (52%), Gaps = 47/474 (9%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E + + ++ PRGK +GG+S IN MVY RG DFD+W G GW+Y D
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S+ + G G L V++ PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GFARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP HL+E I ++ D VG N+QDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVE--SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
L + + +T+ + ++K R +++L+ G E+ AF +K +
Sbjct: 292 LEVY-IQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGAT-NHFESAAFVRSKAGVE- 348
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGF 1069
+PD++ F P A+ D K S F V P+ RS+
Sbjct: 349 -YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----RSK-- 384
Query: 1070 VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 385 ---SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 249/538 (46%), Gaps = 121/538 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+E+ ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+++E P + G + VT P GKV+G
Sbjct: 62 FSSE----------------PEPHIGGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W+ G GW++ +VLPYFK+ E+ + + + G G
Sbjct: 85 GSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL ++AGH+ G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GFARKIVLEG----KRAVGVEIEAGRTFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL+E I ++ D VG NLQDH+ V++ + + L
Sbjct: 257 KLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE----VYIQQECTQPITL------ 306
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
E+N+ ++G L+F D T + F+ ++
Sbjct: 307 -----YSELNL--FSKARIGVEW--------LLFKTGDGAT---NHFESAAFV------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRL 422
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 247/474 (52%), Gaps = 47/474 (9%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E + + ++ PRGK +GG+S IN MVY RG DFD+W G GW+Y D
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S+ + G G L V++ PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GFARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP HL+E I ++ D VG N+QDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVE--SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
L + + +T+ + ++K R +++L+ G E+ AF +K +
Sbjct: 292 LEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT-NHFESAAFVRSKAGVE- 348
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGF 1069
+PD++ F P A+ D K S F V P+ RS+
Sbjct: 349 -YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----RSK-- 384
Query: 1070 VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 385 ---SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 248/538 (46%), Gaps = 121/538 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+E+ ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+++E P + G + VT P GKV+G
Sbjct: 62 FSSE----------------PEPHIGGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W+ G GW++ +VLPYFK+ E+ + + + G G
Sbjct: 85 GSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL ++AGH+ G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GFARKIVLEG----KRAVGVEIEAGRTFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL+E I ++ D VG NLQDH+ V++
Sbjct: 257 KLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE----VYI---------------- 296
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
+E P+ K+ + + + L+F D T + F+ ++
Sbjct: 297 -----QQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT---NHFESAAFV------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRL 422
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 /
NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 247/474 (52%), Gaps = 47/474 (9%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E + + ++ PRGK +GG+S IN MVY RG DFD+W G GW+Y D
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S+ + G G L V++ PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GFARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP HL+E I ++ D VG N+QDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVE--SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
L + + +T+ + ++K R +++L+ G E+ AF +K +
Sbjct: 292 LEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT-NHFESAAFVRSKAGVE- 348
Query: 1010 NHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGF 1069
+PD++ F P A+ D K S F V P+ RS+
Sbjct: 349 -YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----RSK-- 384
Query: 1070 VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 385 ---SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 248/538 (46%), Gaps = 121/538 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+E+ ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+++E P + G + VT P GKV+G
Sbjct: 62 FSSE----------------PEPHIGGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D W+ G GW++ +VLPYFK+ E+ + + + G G
Sbjct: 85 GSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL ++AGH+ G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GFARKIVLEG----KRAVGVEIEAGRTFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL+E I ++ D VG NLQDH+ V++
Sbjct: 257 KLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE----VYI---------------- 296
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
+E P+ K+ + + + L+F D T + F+ ++
Sbjct: 297 -----QQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGAT---NHFESAAFV------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRL 422
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 250/515 (48%), Gaps = 57/515 (11%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL-LTDVPLFVSYMVDTDFNWGYK 716
+D+IV+G GS G V+A RL+ENP+ V L+EAGR ++ L +P+ + M W
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLL 64
Query: 717 TEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVL 776
TE + +++ + +G+ +GG S IN V++RG P DFD W A G GWS+RDV
Sbjct: 65 TEPQKH----ANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQ 120
Query: 777 PYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELG--YDQVDHCEN 834
YF +SE +V G+ +HG G L V + P S AF+++ E+G Y+ + +
Sbjct: 121 KYFIRSEGNAV--FSGT-WHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGAS 177
Query: 835 PIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK 894
G R S + ++RP R NL V A V KI+ + R GV++
Sbjct: 178 QEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFN--GTRATGVQYIA 235
Query: 895 NRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDHLS 953
N T + +E++++AG + +P+L+MLSGVGP HL E IPV+QDL VG N+QDH
Sbjct: 236 NGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDHF- 294
Query: 954 MAGLVFLVNSSVTIVESKYTKPRYL----MDFLVNGAGPLTLPGGAEALAFYPTKYAEDP 1009
G+ + KY K ++ +++ + +GP+ E AF + DP
Sbjct: 295 --GVDIVAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVA-SNVVEGGAF----WYSDP 347
Query: 1010 NH--PDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSR 1067
+ PD++ F A G G G S N ++RP+SR
Sbjct: 348 SSGVPDLQFHF--LAEAGAEAGVTSVPKGASGITLNS---------------YVLRPKSR 390
Query: 1068 GFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKYASKL 1127
G VR LRS++P +P PN+L D DL+ E ++++ E+ +++K+ K
Sbjct: 391 GTVR-------LRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHIRKT 443
Query: 1128 LPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
F G +P +Y AR+ +H C
Sbjct: 444 --CFFSGKQPTMQMYRDY----AREHGRTSYHPTC 472
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 168/337 (49%), Gaps = 55/337 (16%)
Query: 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII-LDEIPLFVSHIVSSDFNWGYT 106
+D+IVVG GS G V+A RL+EN + V L+EAG + L +P+ + + + W
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLL 64
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
TE K N++ + +G+++G GG+
Sbjct: 65 TEPQ----KHANNRQIPYVQGRILG--------------------------------GGS 88
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYLK 226
S+ N V+TRG P D+D WAA G GWSF +V YF +SE + S +HG G L
Sbjct: 89 SI-NAEVFTRGHPSDFDRWAAEGADGWSFRDVQKYFIRSEGNA---VFSGTWHGTNGPLG 144
Query: 227 IERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYVLA-----NTGNGERYSASRAF 281
+ P ++ + + EMG P P+ G S A N R S + +
Sbjct: 145 VSNLAEPNPTSRAFVQSCQEMGL----PYNPDFNGASQEGAGIYQMTIRNNRRCSTAVGY 200
Query: 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN 341
LRP R NL V RA V K++ N RATGV++ N +T A +E++++AGA+
Sbjct: 201 LRPALGRKNLTVVTRALVLKIVF----NGTRATGVQYIANGTLNTAEASQEIVVTAGAIG 256
Query: 342 SPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDH 377
+P+L+MLSG+GP HL E IPV+QDL VG NLQDH
Sbjct: 257 TPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDH 293
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=betA PE=3 SV=1
Length = 549
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 249/521 (47%), Gaps = 75/521 (14%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E+ +VL++EAG + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ + PL AF+EAG + G++ + +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+ + +I+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGIVY-GLARRIVIE--NGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ ++ VK +EVI+SA + NSP+LLMLSG+GP HL+E+ I V D VG N+QDH
Sbjct: 232 ERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L GG EA A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGLKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRS +P P NY+S D + +++ E+ +A
Sbjct: 385 -------------SRGSVTLRSPDPKADPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKA 431
Query: 1120 MQKYASKLLPVKFPGCEPYE-FRSDEYWACAARQLTTNLHH 1159
Y + P +P E +SDE R+ + +H
Sbjct: 432 FDAY-------RGPEIQPGEGVQSDEQIDSFLREHLESAYH 465
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 176/336 (52%), Gaps = 49/336 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
+ DF+++GSGS GS +A RL+E+ +VL++EAG + ++P ++ +S +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV +G
Sbjct: 62 YLSEPE----PNLNNRRITAPRGKV---------------------------------IG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 85 GSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL + ++AG + G++ D + GF + G R+SA+ A+L+
Sbjct: 142 LHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSKQEGFGLMEQTIFAGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+ + + + ++ EN RATGVE + + V+A +EVI+SA + NSP
Sbjct: 202 PALKRDNVGIVYG--LARRIVIENG---RATGVEIERGGRTEVVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHV 378
+LLMLSGIGP HL+EM I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDHM 292
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 251/521 (48%), Gaps = 75/521 (14%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE-AGREESLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E+ +V++LE G + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DFD WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPY+K+ E S + G G L V++ + PL AF+EAG + G++ + +
Sbjct: 118 VLPYYKRMEH---SHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + RG R SA+ A++RP KR N+++ + KI+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVELVR-CFARKIVIE--NGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ ++ V+ +EVI+SA + NSP+LLMLSG+GP HL+E+ I V D VG N+QDH
Sbjct: 232 ERGGRTEVVRANREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L G E+ A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGVKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRSS+P P NY+S D + +++ E+ +A
Sbjct: 385 -------------SRGDVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKA 431
Query: 1120 MQKYASKLLPVKFPGCEPYE-FRSDEYWACAARQLTTNLHH 1159
Y + P +P E R+DE R+ + +H
Sbjct: 432 FDLY-------RGPEIQPGEKVRTDEEIDAFLREHLESAYH 465
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 180/338 (53%), Gaps = 49/338 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSSD-FNWG 104
+ DF+++GSGS GS +A RL+E+ +V++LE G ++ ++P ++ +S + +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV+GG+S N MVY RG D
Sbjct: 62 YLSEPE----PNLNNRRITAPRGKVIGGSSSINGMVYVRGHSED---------------- 101
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
+D W LG GW++ +VLPY+K+ E E + G G
Sbjct: 102 -----------------FDRWEELGAKGWAYADVLPYYKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL ++AG + G+++ D + GF + T G R+SA+ A+LR
Sbjct: 142 LHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNGSKQEGFGLMEQTTWRGRRWSAASAYLR 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+++ R K++I+ RATGVE + + VRA +EVI+SA + NSP
Sbjct: 202 PALKRPNVELV-RCFARKIVIENG----RATGVEIERGGRTEVVRANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSM 380
+LLMLSGIGP HL+EM I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPAAHLQEMGIDVKADRPGVGQNLQDHMEF 294
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 248/493 (50%), Gaps = 56/493 (11%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLL---TDVPLFVSY-MVDTDFN 712
EYD+I+IGAGS G+V+A RLTE + +VLLLEAG + L T +P +++ + +N
Sbjct: 2 EYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWS 771
W Y+T+ + M+++ RGK +GG+S+IN M Y RG DFDNW + G WS
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWS 117
Query: 772 YRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSW-RTPLSAAFLEAGSELGYDQVD 830
Y D LPYF+K+E V + YHG G + V L A +EAG + GY + D
Sbjct: 118 YLDCLPYFRKAETRDVG---SNDYHGATGPVSVATPKMGNNELFHAMVEAGVQAGYPRTD 174
Query: 831 HCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRT 887
+ ++ +G R S ++ ++ + R NL + A KIL + KR
Sbjct: 175 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFE--GKRA 232
Query: 888 YGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGY 946
GV + K TV+ R+EV+L AG + SPQ+L SGVGP+ L+ L+IPV+ DL VG
Sbjct: 233 VGVAYFKGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIPVVHDLPGVGE 292
Query: 947 NMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTK 1004
N+QDHL M L + V++ + + +P+ ++L +G G + EA F ++
Sbjct: 293 NLQDHLEMY-LQYACKEPVSLYPALQWFNQPKIGAEWLFSGTG-IGASNQFEAGGFIRSR 350
Query: 1005 YAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRP 1064
++ P+++ F P A+ + ++++ F V
Sbjct: 351 --DEFAWPNIQYHFLPVAINYNGSNAVKE-----HGFQAHV------------------- 384
Query: 1065 RSRGFVR-LSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
G +R LSRG V++RS + + P NY+S +D +AI++ E+ A+ KY
Sbjct: 385 ---GSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKY 441
Query: 1124 ASKLLPVKFPGCE 1136
+ + PG E
Sbjct: 442 RGREIS---PGLE 451
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 207/427 (48%), Gaps = 70/427 (16%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
EYD+I++G+GS G+V+A RLTE S+ +VLLLEAG + LD ++P ++ + +N
Sbjct: 2 EYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y T+ M N+R RGK +G
Sbjct: 62 WAYETDPE----PHMNNRRMECGRGKGLG------------------------------- 86
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG D+D WA + G WS+ + LPYF+K+E T ++ S+ YHG
Sbjct: 87 --GSSLINGMCYIRGNAMDFDNWATMPGLEDWSYLDCLPYFRKAE---TRDVGSNDYHGA 141
Query: 222 GGYLKIERP-LWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSAS 278
G + + P + L +++AG + GY D + GF + T G R S +
Sbjct: 142 TGPVSVATPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRASTA 201
Query: 279 RAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAG 338
R +L + R NL + A K+L + KRA GV +FK + TV+AR+EV+L AG
Sbjct: 202 RGYLDQAKGRKNLTIVTHALTDKILFEG----KRAVGVAYFKGESPQTVQARREVLLCAG 257
Query: 339 ALNSPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELL 397
A+ SPQ+L SG+GP+D L+ ++IPV+ DL VG NLQDH+ M L + + V++ L
Sbjct: 258 AIASPQILQRSGVGPKDLLQGLDIPVVHDLPGVGENLQDHLEMY-LQYACKEPVSLYPAL 316
Query: 398 ML--------------SGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVT 443
+GIG + E D N+Q H + + N S
Sbjct: 317 QWFNQPKIGAEWLFSGTGIGASNQFEAGGFIRSRDEFAWPNIQYHFLPVAINY--NGSNA 374
Query: 444 IVESQFQ 450
+ E FQ
Sbjct: 375 VKEHGFQ 381
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=betA PE=3 SV=2
Length = 549
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 237/484 (48%), Gaps = 67/484 (13%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSY-MVDTDFNWG 714
+ D++++G+GS GS IA RL+E+ ++V+++EAG + +P +++ M +NWG
Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + + ++ PRGK +GG+S IN +VY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ PL AF++AG++ G++ D +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+ + K++I+ R GVE
Sbjct: 175 SKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVN-GFARKVIIE--NGRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ + TVK +EVI+SA + NSP+LLMLSG+GP HL+++ I V D VG N+QDH
Sbjct: 232 ERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L GG EA A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGLKQPDIQYHFLPVAISYDG-----KAAAKSHGFQAHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRS++P D P NY+S D + +++ E+ +A
Sbjct: 385 -------------SRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKA 431
Query: 1120 MQKY 1123
+
Sbjct: 432 FDDF 435
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 239/539 (44%), Gaps = 121/539 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
+ D+++VGSGS GS +A RL+E+ ++V+++EAG + ++P ++ +S +NWG
Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV+GG+S N +VY R
Sbjct: 62 YLSEPE----PNLDNRRITAPRGKVIGGSSSINGLVYVR--------------------- 96
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 97 ------------GHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R PL + AG + G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+ + KV+I+ RA GVE + + TV+A +EVI+SA + NSP
Sbjct: 202 PALKRGNVTLVN-GFARKVIIENG----RAVGVEIERRGRVETVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP HL++M I V D VG NLQDH+ + S V L
Sbjct: 257 KLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEF----YFQQVSTKPVSLYSW--- 309
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
+P +AG +L++ +QF+ ++
Sbjct: 310 ----------LPWFWQ-----------GVAGAQWLLSKGGLGASNQFEACAFL------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
++PG +PDI+ F P A++ D + +S
Sbjct: 342 ---RSAPG---------------LKQPDIQYHFLPVAISYDGKAAAKS----------HG 373
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMC 581
+Q + YN+ SRG V LRS++P D P NY+S D + +++
Sbjct: 374 FQAHV---GYNLSK------SRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLT 423
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 235/484 (48%), Gaps = 67/484 (13%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E+ +VL++EAG + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ + PL AF+EAG + G++ + +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+++ +I+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEIIY-GFAQRIVIE--DGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ K VK +EVI+SA + NSP+LLMLSG+GP HL+E+ I V D VG N+QDH
Sbjct: 232 ERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L GG EA A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGLKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRS +P P NY+S + D + +++ EL A
Sbjct: 385 -------------SRGSVTLRSPDPKADPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAA 431
Query: 1120 MQKY 1123
Y
Sbjct: 432 FDDY 435
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 179/336 (53%), Gaps = 49/336 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
+ DF+++GSGS GS +A RL+E+ +VL++EAG + ++P ++ +S +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV+GG+S N MVY R
Sbjct: 62 YLSEPE----PNLNNRRITAPRGKVIGGSSSINGMVYVR--------------------- 96
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 97 ------------GHAEDFNRWEELGAGGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL + ++AG + G++ D + GF + +G R+SA+ A+L+
Sbjct: 142 LHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQEGFGLMEQTIFSGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+++ +++I++ RATGVE + + V+A +EVI+SA + NSP
Sbjct: 202 PALKRKNVEII-YGFAQRIVIEDG----RATGVEIERGGKIEVVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHV 378
+LLMLSGIGP +HL+EM I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDHM 292
>sp|Q3JLL7|BETA_BURP1 Choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b)
GN=betA PE=3 SV=1
Length = 565
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 249/519 (47%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+E+D+I+ GAGS G+V+A RLTE+P TVLLLEAG + T +P ++Y + +
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M+ + RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYF+K+E V + YHG G + V + PL A +EAG + GY +
Sbjct: 120 AYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ RG R S ++ ++ R R NL++ A +IL KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV F T R+EV++ +G + SPQLL SGVGP L EL+IPV+ DL VG
Sbjct: 235 ATGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + F V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 RNLQDHLEMY-IQFECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS SRG VKL+S +P P NY++++ D +AI+ E+ A+ ++
Sbjct: 390 MRS-----PSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRF 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD R H C
Sbjct: 445 RGREL---NPGA---DLKSDNELDTFVRARAETAFHPSC 477
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/539 (28%), Positives = 239/539 (44%), Gaps = 119/539 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGYT 106
E+D+I+ G+GS G+V+A RLTE+ TVLLLEAG D+ + +
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAG-----------------GPDYRFDFR 47
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
T+ + ++ +R NW T +M + R + GK +GG+
Sbjct: 48 TQMPAALAYPLQGRRYNWAYE-----TDPEPHMNHRR-----------MECGRGKGLGGS 91
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYL 225
S+ N M Y RG DYD WA + W++ + LPYF+K+E T ++ + YHG G +
Sbjct: 92 SLINGMCYIRGNALDYDNWATHKGLEDWAYLDCLPYFRKAE---TRDVGPNDYHGGDGPV 148
Query: 226 KI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSASRAF 281
+ +P PL + +++AG + GY D + GF + T G R S +R +
Sbjct: 149 SVTTSKP-GVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPRGRRASTARGY 207
Query: 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN 341
L R RPNL++ A ++L KRATGV F R T AR+EV++ +GA+
Sbjct: 208 LDQARARPNLEIVTHALADRILFSG----KRATGVTFLHGSARVTAHARREVLVCSGAIA 263
Query: 342 SPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLS 400
SPQLL SG+GP + L E++IPV+ DL VG NLQDH+ M + F + V++
Sbjct: 264 SPQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEMY-IQFECKEPVSLYPA---- 318
Query: 401 GIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWF 460
L+ N P I GL +++N + + F+ +I
Sbjct: 319 -------LKWWNQPKI----------------GLEWMLNGTGLGASNHFEAGGFI----- 350
Query: 461 RRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYR 520
+ +D P+I+ F P A+ + + ++
Sbjct: 351 --------------------RTRDDDPWPNIQYHFLPVAINYNGSNAI------------ 378
Query: 521 KVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIK 579
E + +R SRG VKL+S +P P NY++++ D +AI+
Sbjct: 379 -------EMHGFQAHVGSMRSPSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIR 430
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 246/521 (47%), Gaps = 75/521 (14%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E+ +VL++EAG + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E S + G G L V++ + PL AF+EAG + G++ D +
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+ + KI+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVGMVY-GLARKIVIE--DGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ K VK +EVI+SA + NSP+LLMLSG+GP HL ++ I V D VG N+QDH
Sbjct: 232 ERGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L GG EA A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 FL--RSAPGLKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRS +P P NY+S D + +++ E+ A
Sbjct: 385 -------------SRGSVTLRSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTA 431
Query: 1120 MQKYASKLLPVKFPGCEPYE-FRSDEYWACAARQLTTNLHH 1159
Y + P +P E +SDE R+ + +H
Sbjct: 432 FDAY-------RGPEIQPGEGVQSDEQIDAFLREHLESAYH 465
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 176/336 (52%), Gaps = 49/336 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
+ DF+++GSGS GS +A RL+E+ +VL++EAG + ++P ++ +S +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV +G
Sbjct: 62 YLSEPE----PNLNNRRITAPRGKV---------------------------------IG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D++ W LG GW++ +VLPYFK+ E E + G G
Sbjct: 85 GSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL + ++AG + G++ D + GF + +G R+SA+ A+L+
Sbjct: 142 LHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQEGFGLMEQTIFSGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+ + K++I++ RATGVE + + V+A +EVI+SA + NSP
Sbjct: 202 PALKRKNVGMV-YGLARKIVIEDG----RATGVEIERGGKVEVVKATREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHV 378
+LLMLSGIGP HL +M I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDHM 292
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 243/478 (50%), Gaps = 55/478 (11%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE-SLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ ++V+++E G + L +P +S+ ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ TE + + ++ PRGK +GG+S IN MVY RG +D+D+W G GW+Y D
Sbjct: 62 FSTEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ E+ S + + G G L +++ PL AF+EAG E G++ + +
Sbjct: 118 VLPYFKRMENSSGGQ---EGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
E GF + G R SA+ A+++P KR N+K+ K KI+++ KR GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GLARKIVLE--GKRAVGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
R T++ R+EVI++A ++NSP+LLMLSG+GP L+E I V+ D VG N+QDH
Sbjct: 232 EAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGA------EALAFYPTKY 1005
L + + T + Y+K + GA L G E+ AF +K
Sbjct: 292 LEV-----YIQQECTQPITLYSKLNLFSKAKI-GAEWLFFKTGDGATNHFESAAFLRSKA 345
Query: 1006 AEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPR 1065
+ +PD++ F P A+ D K S F V P+ R
Sbjct: 346 GVE--YPDIQYHFLPVAIRYDG-----KAAAQSHGFQAHV------------GPM----R 382
Query: 1066 SRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
S+ SRG V LRS+NP + P NY+S D +++ E+ A Y
Sbjct: 383 SK-----SRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPY 435
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 254/564 (45%), Gaps = 127/564 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNWG 104
E DF+++GSGS GS +A RL+E+ ++V+++E G P+ L ++P +S ++ + ++WG
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
++TE P + G + VT P GKV+G
Sbjct: 62 FSTE----------------PEPHIGGRSLVT---------------------PRGKVLG 84
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG DYD W+ G GW++ +VLPYFK+ E+ + + G G
Sbjct: 85 GSSSINGMVYVRGHARDYDHWSESGARGWAYADVLPYFKRMENSSGGQ---EGWRGTNGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L I+R PL ++AGHE G+++ D + GF + NG R+SA+ A+L+
Sbjct: 142 LYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGEKQEGFGPMEQTIHNGRRWSAANAYLK 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+K+ K K++++ KRA GVE + T+RAR+EVI++A ++NSP
Sbjct: 202 PALKRPNVKLVK-GLARKIVLEG----KRAVGVEIEAGRSFSTIRARREVIIAASSINSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402
+LLMLSGIGP L+E I V+ D VG NLQDH+ V++ + + L
Sbjct: 257 KLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDHLE----VYIQQECTQPITL------ 306
Query: 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR 462
++N+ K+G L F D T + F+ ++
Sbjct: 307 -----YSKLNL--FSKAKIGAEW--------LFFKTGDGAT---NHFESAAFL------- 341
Query: 463 QGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKV 522
S G E PDI+ F P A+ D + +S
Sbjct: 342 ----RSKAGVEY--------------PDIQYHFLPVAIRYDGKAAAQS------------ 371
Query: 523 YQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMC- 581
+ +R SRG V LRS+NP + P NY+S D +++
Sbjct: 372 -------HGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTR 424
Query: 582 -----ALFSLVCHLLVLSVAHAQS 600
A F+ + AH QS
Sbjct: 425 EIFGQAAFNPYRGAEIQPGAHVQS 448
>sp|Q63KK7|BETA_BURPS Choline dehydrogenase OS=Burkholderia pseudomallei (strain K96243)
GN=betA PE=3 SV=1
Length = 565
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 252/521 (48%), Gaps = 61/521 (11%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+E+D+I+ GAGS G+V+A RLTE+P TVLLLEAG + T +P ++Y + +
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNW---EALGNP 768
NW Y+T+ + M+ + RGK +GG+S+IN M Y RG D+DNW +AL +
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKALED- 118
Query: 769 GWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYD 827
W+Y D LPYF+K+E V + YHG G + V + PL A +EAG + GY
Sbjct: 119 -WAYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYP 174
Query: 828 QVDHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPIT 884
+ D + ++ RG R S ++ ++ R R NL++ A +IL
Sbjct: 175 RTDDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS--G 232
Query: 885 KRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK- 943
KR GV F T R+EV++ +G + SPQLL SGVGP L EL+IPV+ DL
Sbjct: 233 KRATGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPG 292
Query: 944 VGYNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFY 1001
VG N+QDHL M + F V++ + + +P+ +++++NG G L EA F
Sbjct: 293 VGRNLQDHLEMY-IQFECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFI 350
Query: 1002 PTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
T+ +D P+++ F P A+ + ++ E + +
Sbjct: 351 RTR--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHV 387
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
RS SRG VKL+S +P P NY++++ D +AI+ E+ A+
Sbjct: 388 GSMRS-----PSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALD 442
Query: 1122 KYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
++ + L PG + +SD R H C
Sbjct: 443 RFRGREL---NPGA---DLKSDNELDTFVRARAETAFHPSC 477
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 151/539 (28%), Positives = 239/539 (44%), Gaps = 119/539 (22%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGYT 106
E+D+I+ G+GS G+V+A RLTE+ TVLLLEAG D+ + +
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAG-----------------GPDYRFDFR 47
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
T+ + ++ +R NW T +M + R + GK +GG+
Sbjct: 48 TQMPAALAYPLQGRRYNWAYE-----TDPEPHMNHRR-----------MECGRGKGLGGS 91
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYL 225
S+ N M Y RG DYD WA + W++ + LPYF+K+E T ++ + YHG G +
Sbjct: 92 SLINGMCYIRGNALDYDNWATHKALEDWAYLDCLPYFRKAE---TRDVGPNDYHGGDGPV 148
Query: 226 KI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSASRAF 281
+ +P PL + +++AG + GY D + GF + T G R S +R +
Sbjct: 149 SVTTSKP-GVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPRGRRASTARGY 207
Query: 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN 341
L R RPNL++ A ++L KRATGV F R T AR+EV++ +GA+
Sbjct: 208 LDQARARPNLEIVTHALADRILFSG----KRATGVTFLHGSARVTAHARREVLVCSGAIA 263
Query: 342 SPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLS 400
SPQLL SG+GP + L E++IPV+ DL VG NLQDH+ M + F + V++
Sbjct: 264 SPQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEMY-IQFECKEPVSLYPA---- 318
Query: 401 GIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWF 460
L+ N P I GL +++N + + F+ +I
Sbjct: 319 -------LKWWNQPKI----------------GLEWMLNGTGLGASNHFEAGGFI----- 350
Query: 461 RRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYR 520
+ +D P+I+ F P A+ + + ++
Sbjct: 351 --------------------RTRDDDPWPNIQYHFLPVAINYNGSNAI------------ 378
Query: 521 KVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIK 579
E + +R SRG VKL+S +P P NY++++ D +AI+
Sbjct: 379 -------EMHGFQAHVGSMRSPSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIR 430
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 236/484 (48%), Gaps = 67/484 (13%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE-AGREESLLTDVPLFVSY-MVDTDFNWG 714
+ DF++IG+GS GS +A RL+E+ +V++LE G + +P +++ M +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
Y +E + ++++ PRGK +GG+S IN MVY RG +DF+ WE LG GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYAD 117
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPY+K+ E S + G G L V++ + PL AF+EAG E G++ + +
Sbjct: 118 VLPYYKRMEH---SHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNG 174
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + RG R SA+ A++RP KR N+++ + KI+I+ R GVE
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVELIR-CFARKIVIE--NGRATGVEI 231
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+ + VK +EVI+SA + NSP+LLMLSG+GP HL+E+ I V D VG N+QDH
Sbjct: 232 ERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDH 291
Query: 952 LSMAGLVFLVNSSVTIVESKYTKPRYLMDFL------VNGAGPLTLPGGA------EALA 999
+ + TKP L +L V GA L G E+ A
Sbjct: 292 MEF------------YFQQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCA 339
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F + A PD++ F P A++ D K S F V Y++
Sbjct: 340 F--LRSAPGVKQPDIQYHFLPVAISYDG-----KAAAKSHGFQVHV--------GYNLSK 384
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
SRG V LRSS+P P NY+S D + +++ E+ +A
Sbjct: 385 -------------SRGNVSLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKA 431
Query: 1120 MQKY 1123
Y
Sbjct: 432 FDLY 435
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 49/338 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSSD-FNWG 104
+ DF+++GSGS GS +A RL+E+ +V++LE G ++ ++P ++ +S + +NWG
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y +E + N+R PRGKV+GG+S N MVY RG H
Sbjct: 62 YLSEPE----PNLNNRRITAPRGKVIGGSSSINGMVYVRG--HS---------------- 99
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
D++ W LG GW++ +VLPY+K+ E E + G G
Sbjct: 100 ---------------EDFNRWEELGAQGWAYADVLPYYKRMEHSHGGE---EGWRGTDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL ++AG E G+++ D + GF + T G R+SA+ A+LR
Sbjct: 142 LHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNGSKQEGFGLMEQTTWRGRRWSAASAYLR 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPN+++ R K++I+ RATGVE + + V+A +EVI+SA + NSP
Sbjct: 202 PALKRPNVELI-RCFARKIVIENG----RATGVEIERGGRIEVVKANREVIVSASSFNSP 256
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSM 380
+LLMLSGIGP HL+EM I V D VG NLQDH+
Sbjct: 257 KLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDHMEF 294
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 237/477 (49%), Gaps = 53/477 (11%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE-AGREESLLTDVPLFVSYMVDTD-FNWG 714
E DF++IG+GS GS +A RL+E+ +V+++E G + L +P +S ++ ++WG
Sbjct: 3 EADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWG 62
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRD 774
+ +E + + + PRGK +GG+S IN MVY RG +DFD+W G GW + D
Sbjct: 63 FASEPEPH----LGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFAD 118
Query: 775 VLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD--HC 832
VLPYFK+ ED + G GG L V++ S + PL AF+EAG + G++ D +
Sbjct: 119 VLPYFKRMEDNDGGE---DGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNG 175
Query: 833 ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF 892
GF + G R SA+ A+++P KR N+ + K +++I+ +R GVE
Sbjct: 176 SKQEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSLVK-GFARRVIIE--NQRAIGVEI 232
Query: 893 SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL-KVGYNMQDH 951
+++ VK R+EVI++A ++NSP++LMLSG+GP HL E I V+ D VG N+QDH
Sbjct: 233 EAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDH 292
Query: 952 LSM-----AGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYA 1006
+ + + +NS + ++L F +G G EA AF ++
Sbjct: 293 MELYIQQESTKPITLNSVLNPFSKALIGAQWL--FFKSGLGATNH---FEAAAFVRSRAG 347
Query: 1007 EDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRS 1066
D +PD++ F P A+ D K S F V P+ RS
Sbjct: 348 VD--YPDIQYHFIPAAVRYDG-----KAAAKSHGFQAHVG------------PM----RS 384
Query: 1067 RGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
+ SRG V LRS +P P NY+S D I++ E+ A +
Sbjct: 385 K-----SRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAF 436
Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 49/338 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVS-SDFNWG 104
E DF+++GSGS GS +A RL+E+ +V+++E G +I L ++P +S ++ S ++WG
Sbjct: 3 EADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWG 62
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+ +E P + G P GKV+G
Sbjct: 63 FASE-------------------------------------PEPHLGGRVLATPRGKVIG 85
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G+S N MVY RG D+D WA G GW F +VLPYFK+ ED E + G GG
Sbjct: 86 GSSSINGMVYVRGHARDFDHWAEEGATGWGFADVLPYFKRMEDNDGGE---DGWRGHGGP 142
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLANTGNGERYSASRAFLR 283
L ++R + PL ++AG + G+++ D + GF + G R+SA+ A+L+
Sbjct: 143 LHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGFGPMEQTISGGRRWSAASAYLK 202
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR N+ + K + +I EN +RA GVE +KQ V+AR+EVI++A ++NSP
Sbjct: 203 PALKRKNVSLVK--GFARRVIIEN---QRAIGVEIEAHKQIQVVKARREVIVAASSINSP 257
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSM 380
++LMLSGIGP +HL E I V+ D VG NLQDH+ +
Sbjct: 258 KILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDHMEL 295
>sp|Q62CH8|BETA_BURMA Choline dehydrogenase OS=Burkholderia mallei (strain ATCC 23344)
GN=betA PE=3 SV=1
Length = 565
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 248/519 (47%), Gaps = 57/519 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+E+D+I+ GAGS G+V+A RLTE+P TVLLLEAG + T +P ++Y + +
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGW 770
NW Y+T+ + M+ + RGK +GG+S+IN M Y RG D+DNW G W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQV 829
+Y D LPYF+K+E V + YHG G + V + PL A +EAG + GY +
Sbjct: 120 AYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
D + ++ RG R S ++ ++ R R NL++ A +IL KR
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS--GKR 234
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV F T R+EV++ +G + SPQLL SGVGP L EL+IPV+ DL VG
Sbjct: 235 ATGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVG 294
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + F V++ + + +P+ +++++NG G L EA F T
Sbjct: 295 RNLQDHLEMY-IQFECKEPVSLYPALKWWNQPKIGLEWMLNGTG-LGASNHFEAGGFIRT 352
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
+ +D P+++ F P A+ + ++ E + +
Sbjct: 353 R--DDDPWPNIQYHFLPVAINYNGSNAI---------------------EMHGFQAHVGS 389
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS S G VKL+S +P P NY++++ D +AI+ E+ A+ ++
Sbjct: 390 MRS-----PSCGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRF 444
Query: 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ L PG + +SD R H C
Sbjct: 445 RGREL---NPGA---DLKSDNELDTFVRARAETAFHPSC 477
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 200/423 (47%), Gaps = 62/423 (14%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGYT 106
E+D+I+ G+GS G+V+A RLTE+ TVLLLEAG D+ + +
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAG-----------------GPDYRFDFR 47
Query: 107 TEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGT 166
T+ + ++ +R NW T +M + R + GK +GG+
Sbjct: 48 TQMPAALAYPLQGRRYNWAYE-----TDPEPHMNHRR-----------MECGRGKGLGGS 91
Query: 167 SVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGYL 225
S+ N M Y RG DYD WA + W++ + LPYF+K+E T ++ + YHG G +
Sbjct: 92 SLINGMCYIRGNALDYDNWATHKGLEDWAYLDCLPYFRKAE---TRDVGPNDYHGGDGPV 148
Query: 226 KI--ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERYSASRAF 281
+ +P PL + +++AG + GY D + GF + T G R S +R +
Sbjct: 149 SVTTSKP-GVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPRGRRASTARGY 207
Query: 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN 341
L R RPNL++ A ++L KRATGV F R T AR+EV++ +GA+
Sbjct: 208 LDQARARPNLEIVTHALADRILFSG----KRATGVTFLHGSARVTAHARREVLVCSGAIA 263
Query: 342 SPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGLVFLV 387
SPQLL SG+GP + L E++IPV+ DL VG NLQDH+ M L +
Sbjct: 264 SPQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEMYIQFECKEPVSLYPALKWWN 323
Query: 388 NDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVES 447
+ + +L +G+G +H E D N+Q H + + N S I
Sbjct: 324 QPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINY--NGSNAIEMH 381
Query: 448 QFQ 450
FQ
Sbjct: 382 GFQ 384
>sp|Q4A0Q1|BETA_STAS1 Choline dehydrogenase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=betA
PE=3 SV=1
Length = 560
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 230/482 (47%), Gaps = 52/482 (10%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSYMVDTD 710
++ YD+I+IG GS GSV+ +R++E+ + VL+LEAGR + LL +P + Y
Sbjct: 1 MKQSYDYIIIGGGSAGSVLGSRISEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNK 60
Query: 711 -FNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNW-EALGNP 768
++W Y+T + M + RGK +GG+S IN M+Y RG P D++ W + G
Sbjct: 61 LYDWIYETTPEPH----MDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGMD 116
Query: 769 GWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQ 828
W Y LPYFK+ E + K + G G +K+ + PL AF +AG E GY++
Sbjct: 117 SWDYAHCLPYFKRLEK-TFGATKDDQFRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNK 175
Query: 829 VDHCEN--PIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
GF + G R SAS+A++ P KR NL+V A VTK+ + +
Sbjct: 176 TPDVNGFRQEGFGPFDSQVHNGRRVSASRAYLHPAMKRKNLEVQTRAFVTKLNFE--GNK 233
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNI-PVIQDLKVG 945
GV F KN + +TV KEVILS G +NSPQLL LSG+G HL L I P I VG
Sbjct: 234 VTGVTFKKNGREHTVNA-KEVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRIHLPGVG 292
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFL----VNGAGPLTLPGGAEALAFY 1001
N +DHL V++ ++ V + + + M F+ + G E F
Sbjct: 293 ENFEDHLE----VYVQHACKEPVSMQPSLNKLKMPFIGLQWIFGRKGAAASNHFEGGGF- 347
Query: 1002 PTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
+ ED ++P++ F P A+ Y+ P A + P+
Sbjct: 348 -VRSNEDVDYPNLMFHFLPIAVR-----------------YDGTKAPAAHGYQVHVGPMY 389
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
SRG +K++S +PF P F NYLS D +EAIK+A + +A+
Sbjct: 390 SN---------SRGHLKIKSKDPFVKPDFVFNYLSTEEDKREWVEAIKVARNILGQKALD 440
Query: 1122 KY 1123
Y
Sbjct: 441 PY 442
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 170/338 (50%), Gaps = 42/338 (12%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWGY 105
+ YD+I++G GS GSV+ +R++E+ + VL+LEAG SD+ W
Sbjct: 3 QSYDYIIIGGGSAGSVLGSRISEDVSNNVLVLEAG-----------------RSDYPWDL 45
Query: 106 TTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGG 165
+ + N+ +W + T PH DG GKV+GG
Sbjct: 46 LIQMPAALMYPAGNKLYDW--------------IYETTPEPH-MDGRKVGHA-RGKVLGG 89
Query: 166 TSVTNYMVYTRGVPHDYDGWAA-LGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
+S N M+Y RG P DY+ WA G W + LPYFK+ E A K + G G
Sbjct: 90 SSSINGMIYQRGNPMDYEKWAKPEGMDSWDYAHCLPYFKRLEKTFGA-TKDDQFRGHHGP 148
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
+K+ R PL + DAG E GY+ D + GF + NG R SASRA+L
Sbjct: 149 IKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGFRQEGFGPFDSQVHNGRRVSASRAYLH 208
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KR NL+V RA VTK+ + N + TGV F KN + HTV A KEVILS GA+NSP
Sbjct: 209 PAMKRKNLEVQTRAFVTKLNFEGN----KVTGVTFKKNGREHTVNA-KEVILSGGAINSP 263
Query: 344 QLLMLSGIGPRDHLEEMNI-PVIQDLKVGYNLQDHVSM 380
QLL LSGIG +HL + I P I VG N +DH+ +
Sbjct: 264 QLLQLSGIGDSEHLRSLGIEPRIHLPGVGENFEDHLEV 301
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 259/524 (49%), Gaps = 67/524 (12%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
KEYD+I+IGAGS G+V+A RLTE+ + TVLLLEAG + T +P ++Y + +
Sbjct: 4 KEYDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNW-EALGNPGW 770
NW Y+T+ E F M+++ RGK +GG+S+IN M Y RG D+D W E G W
Sbjct: 64 NWAYETDP-EPF---MNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAERKGLENW 119
Query: 771 SYRDVLPYFKKSEDISVSRLKGS-PYHGIGGYLKVEQTSWR--TPLSAAFLEAGSELGYD 827
+Y D LPYF+K+E +R G+ YHG G + V TS R PL A +EAG + GY
Sbjct: 120 TYLDCLPYFRKAE----TRDAGANDYHGGDGPVHV-TTSKRGVNPLFEAMVEAGVQAGYP 174
Query: 828 QVDHCE--NPIGFS----YVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILID 881
+ D GF V AN G R S ++ ++ R R NL + A +IL
Sbjct: 175 RTDDLNGYQQEGFGPMDRTVTAN---GRRASTARGYLDQARPRPNLTIVTYATTDRILFS 231
Query: 882 PITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQD 941
KR GV + + T R+EV+L +G + SPQ+L SGVGP L +L+IPV+ D
Sbjct: 232 --GKRAQGVVYLDGQAQITAHARREVLLCSGAIASPQILQRSGVGPGGWLRDLDIPVVLD 289
Query: 942 L-KVGYNMQDHLSMAGLVFLVNSSVTIVESKY--TKPRYLMDFLVNGAGPLTLPGGAEAL 998
L VG N+QDHL M + + V++ + +P +++++ G G + EA
Sbjct: 290 LPGVGQNLQDHLEMY-MQYECKEPVSLYPALLLRNQPAIGIEWMLKGTG-IGASNHFEAG 347
Query: 999 AFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIV 1058
F T+ +D P+++ F P A+ + ++ K+ G + V
Sbjct: 348 GFIRTR--DDDPWPNIQYHFLPVAINYNGTNAI-KMHGFQ-----------------AHV 387
Query: 1059 PVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETR 1118
+ P SRG VKLRS +P + P NY++++ D +AI++ E+
Sbjct: 388 GSMRSP--------SRGRVKLRSRDPREHPSILFNYMAEALDWREFRDAIRITREIIAQP 439
Query: 1119 AMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
A+ ++ + L PG E +SD R +H C
Sbjct: 440 ALDRFRGRELS---PGA---ELQSDAQIDAFVRARAETAYHPSC 477
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 200/408 (49%), Gaps = 70/408 (17%)
Query: 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSD 100
A+EYD+I++G+GS G+V+A RLTE+ + TVLLLEAG + D ++P +++ +
Sbjct: 3 AKEYDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRR 62
Query: 101 FNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTG 160
+NW Y T+ M N+R RGK +G
Sbjct: 63 YNWAYETDPE----PFMNNRRMECGRGKGLG----------------------------- 89
Query: 161 KVMGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLPYFKKSEDMKTAELKSSPYH 219
G+S+ N M Y RG DYDGWA + W++ + LPYF+K+E T + ++ YH
Sbjct: 90 ----GSSLINGMCYIRGNALDYDGWAERKGLENWTYLDCLPYFRKAE---TRDAGANDYH 142
Query: 220 GVGGYLKI---ERPLWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGER 274
G G + + +R + PL + +++AG + GY D + GF + T NG R
Sbjct: 143 GGDGPVHVTTSKRGV--NPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTANGRR 200
Query: 275 YSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVI 334
S +R +L R RPNL + A ++L KRA GV + + + T AR+EV+
Sbjct: 201 ASTARGYLDQARPRPNLTIVTYATTDRILFSG----KRAQGVVYLDGQAQITAHARREVL 256
Query: 335 LSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDL-KVGYNLQDHVSM------------- 380
L +GA+ SPQ+L SG+GP L +++IPV+ DL VG NLQDH+ M
Sbjct: 257 LCSGAIASPQILQRSGVGPGGWLRDLDIPVVLDLPGVGQNLQDHLEMYMQYECKEPVSLY 316
Query: 381 AGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
L+ ++ I +L +GIG +H E D N+Q H
Sbjct: 317 PALLLRNQPAIGIEWMLKGTGIGASNHFEAGGFIRTRDDDPWPNIQYH 364
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043
/ ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 240/483 (49%), Gaps = 51/483 (10%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I+IGAGS G+V+A RLTE+P+ VLLLEAG + T +P ++Y + +
Sbjct: 5 REYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY 64
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGW 770
NW ++T+ + M+++ RGK +GG+S+IN M Y RG D+DNW + G W
Sbjct: 65 NWAFETDPEPY----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDW 120
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQ-TSWRTPLSAAFLEAGSELGYDQV 829
+Y LPYFK++E + + YHG G + V L AF+ AG E GY
Sbjct: 121 NYLQCLPYFKRAETRDIGP---NDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPAT 177
Query: 830 DHCE--NPIGFSYV-LANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
+ GF + G R S ++ ++ ++R NL + E T +I+ KR
Sbjct: 178 EDVNGYQQEGFGPMDRTTTPNGRRASTARGYLDIAKQRPNLTI--ETHATTDVIEFEGKR 235
Query: 887 TYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VG 945
GV + + ++ V+ R+EV+L AG + SPQ+L SGVG HLEE +IPV+ +L VG
Sbjct: 236 AVGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVG 295
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFYPT 1003
N+QDHL M + + +++ + Y +P+ ++L G G + EA F T
Sbjct: 296 ENLQDHLEMY-IQYECKKPISLYPALKWYNQPKIGAEWLFFGKG-IGASNQFEAAGFIRT 353
Query: 1004 KYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVR 1063
E+ P+++ F P A++ Y + +A+ +
Sbjct: 354 NDQEE--WPNLQYHFLPIAIS---------------------YNGKSAVQAHGFQAHVGS 390
Query: 1064 PRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKY 1123
RS +SRG ++L S +P +P NY+S +D +AI++ E+ E M +Y
Sbjct: 391 MRS-----MSRGRIRLTSRDPKAAPSILFNYMSHDKDWQEFRDAIRITREIIEQPTMDEY 445
Query: 1124 ASK 1126
+
Sbjct: 446 RGR 448
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 190/402 (47%), Gaps = 58/402 (14%)
Query: 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNWG 104
A EYD+I++G+GS G+V+A RLTE+ + VLLLEAG D+ +
Sbjct: 4 AREYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAG-----------------GPDYRFD 46
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
+ T+ + ++ +R NW T YM R + GK +G
Sbjct: 47 FRTQMPAALAYPLQGKRYNW-----AFETDPEPYMNNRR-----------MECGRGKGLG 90
Query: 165 GTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGG 223
G+S+ N M Y RG DYD WA + G W++ + LPYFK++E T ++ + YHG G
Sbjct: 91 GSSLINGMCYLRGNALDYDNWAKIPGLEDWNYLQCLPYFKRAE---TRDIGPNDYHGGDG 147
Query: 224 YLKIERPL-WRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYV-LANTGNGERYSASRA 280
+ + P L + AG E GY D + GF + T NG R S +R
Sbjct: 148 PVSVATPKEGNNELYGAFIRAGIEAGYPATEDVNGYQQEGFGPMDRTTTPNGRRASTARG 207
Query: 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGAL 340
+L ++RPNL + A T V+ E KRA GV + + Q VRAR+EV+L AGA+
Sbjct: 208 YLDIAKQRPNLTIETHA-TTDVIEFEG---KRAVGVSYERKGQAQRVRARREVLLCAGAI 263
Query: 341 NSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM-------------AGLVFL 386
SPQ+L SG+G +HLEE +IPV+ +L VG NLQDH+ M L +
Sbjct: 264 ASPQILQRSGVGNPEHLEEFDIPVVHELPGVGENLQDHLEMYIQYECKKPISLYPALKWY 323
Query: 387 VNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDH 428
+ L GIG + E D + NLQ H
Sbjct: 324 NQPKIGAEWLFFGKGIGASNQFEAAGFIRTNDQEEWPNLQYH 365
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 250/521 (47%), Gaps = 59/521 (11%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDF 711
+EYD+I++GAGS G+ +A RLTE+ TVLLLEAG + T +P +++ + +
Sbjct: 3 QEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRY 62
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGW 770
NW Y+T+ + M+ + RGK +GG+S+IN M Y RG D+D W L G W
Sbjct: 63 NWAYETDPEPH----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDW 118
Query: 771 SYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQ-TSWRTPLSAAFLEAGSELGYDQV 829
+Y D LPYF+K+E + + YHG G + V + PL A +EAG + GY +
Sbjct: 119 TYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 830 DHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKR 886
+ + ++ +G R S ++ ++ +KR L + A KIL + KR
Sbjct: 176 EDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFE--GKR 233
Query: 887 TYGVEFSKNRKSYTV--KCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK- 943
GV + + V + RKEVI+S+G + SPQLL SGVGPR LE L+IPV+ DL
Sbjct: 234 AVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 944 VGYNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAFY 1001
VG N+QDHL + L + V++ S + +P ++L NG G + EA F
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTG-IGASNQFEAGGFI 351
Query: 1002 PTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
T+ E+ P+++ F P A+ + ++ E + + +
Sbjct: 352 RTR--EEFEWPNIQYHFLPVAINYNGSNGVK------------------EHGFQAHMGSM 391
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
P SRG V+L+S +P P NY++ +D + I++ E+ + A+
Sbjct: 392 RSP--------SRGRVQLKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALD 443
Query: 1122 KYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ + + PG E ++DE R+ H C
Sbjct: 444 PFRGREIS---PGI---EVQTDEQLDKFVREHAETAFHPSC 478
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 179/344 (52%), Gaps = 47/344 (13%)
Query: 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVSHIVSSDFNW 103
A+EYD+I+VG+GS G+ +A RLTE+ TVLLLEAG D+ +
Sbjct: 1 MAQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAG-----------------GPDYRF 43
Query: 104 GYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVM 163
+ T+ + ++ +R NW T PH +G + GK +
Sbjct: 44 DFRTQMPAALAFPLQGRRYNW--------------AYETDPEPH-MNGRRM-ECGRGKGL 87
Query: 164 GGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVG 222
GG+S+ N M Y RG DYDGWA L G W++ + LPYF+K+E T ++ + YHG
Sbjct: 88 GGSSLINGMCYIRGNAMDYDGWAKLPGLEDWTYLDCLPYFRKAE---TRDIGPNDYHGGE 144
Query: 223 GYLKIERP-LWRTPLAKCVLDAGHEMGY-DIVDPSEPNAIGFSYVLAN-TGNGERYSASR 279
G + + P PL +++AG + GY D + GF + T G R S +R
Sbjct: 145 GPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTPKGRRASTAR 204
Query: 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSA 337
+L +KR L + A K+L + KRA GV + + ++R RARKEVI+S+
Sbjct: 205 GYLDTAKKRSTLTIVTHALTDKILFEG----KRAVGVSYLQGSTEERVEARARKEVIVSS 260
Query: 338 GALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSM 380
GA+ SPQLL SG+GPR LE ++IPV+ DL VG NLQDH+ +
Sbjct: 261 GAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQDHLEL 304
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 249/521 (47%), Gaps = 60/521 (11%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTD-F 711
++ YD+I++GAGS G V+A+RL+E+ VLLLEAG ++S+ +P +SY ++T+ +
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGSDKSIFIQMPTALSYPMNTEKY 60
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWS 771
W ++T +E G+ + + PRGK +GG+S IN MVY RG DFD WEA G GW+
Sbjct: 61 AWQFETVAEE----GLDGRQLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEAEGAKGWN 116
Query: 772 YRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS--WRTPLSAAFLEAGSELGYDQV 829
Y+ LPYF+K+E + Y G G + + PL AF+EAG + GY +
Sbjct: 117 YQACLPYFRKAETWTGG---ADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGYPET 173
Query: 830 D--HCENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRT 887
+ GF + +G R S S A++ +KR N + K +IL++ K+
Sbjct: 174 QDYNGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRILLE--GKKA 231
Query: 888 YGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGY 946
G+EF ++ + KEV+ SAG++ S QLL LSG+GP+ L++ I V L+ VG
Sbjct: 232 VGIEFEQSGEIKQCFANKEVVSSAGSIGSVQLLQLSGIGPKTVLDKAGIEVKHTLEGVGK 291
Query: 947 NMQDHLSM-----AGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFY 1001
N+QDHL + +NS + ++ +++ GA E+ AF
Sbjct: 292 NLQDHLEVYFQYHCKQPITLNSKLGLISKGLIGTEWILTRKGLGA-----TNHFESCAFI 346
Query: 1002 PTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
++ E P+++ F P A+ D R + + +
Sbjct: 347 RSR--EGLKSPNIQFHFLPAAMRYDG-------------------RAAFDGHGFQVHVGP 385
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
+P SRG V++ S+NP D PK NY+S +D + I++ E+ AM
Sbjct: 386 NKPE-------SRGSVEVVSANPNDKPKIEFNYISTEQDKQDWRDCIRLTREILNQPAMD 438
Query: 1122 KYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ + + PG SDE +Q + +H C
Sbjct: 439 AFRGEEIQ---PG---LNITSDEAIGEWVKQNVESAYHPSC 473
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 188/383 (49%), Gaps = 63/383 (16%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNW 103
+ YD+I+VG+GS G V+A+RL+E+ VLLLEAG ++ I ++P +S+ ++++ + W
Sbjct: 3 QHYDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGSDKSIFIQMPTALSYPMNTEKYAW 62
Query: 104 GYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVM 163
+ T +G+ G+ + P GKV+
Sbjct: 63 QFETVAEEGL------------DGRQL-------------------------HCPRGKVL 85
Query: 164 GGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGG 223
GG+S N MVY RG D+D W A G GW+++ LPYF+K+E T + Y G G
Sbjct: 86 GGSSSINGMVYVRGHACDFDEWEAEGAKGWNYQACLPYFRKAE---TWTGGADEYRGGSG 142
Query: 224 YLKI--ERPLWRTPLAKCVLDAGHEMGY-DIVDPSEPNAIGFSYVLANTGNGERYSASRA 280
+ + PL + ++AG + GY + D + GF + G R S S A
Sbjct: 143 PVGTCNGNDMKLNPLYQAFIEAGKDAGYPETQDYNGYQQEGFGPMHMTVDKGVRASTSNA 202
Query: 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGAL 340
+L +KR N + K ++L++ K+A G+EF ++ + A KEV+ SAG++
Sbjct: 203 YLSRAKKRSNFTLMKGVTAHRILLEG----KKAVGIEFEQSGEIKQCFANKEVVSSAGSI 258
Query: 341 NSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDH------------VSMAGLVFLV 387
S QLL LSGIGP+ L++ I V L+ VG NLQDH +++ + L+
Sbjct: 259 GSVQLLQLSGIGPKTVLDKAGIEVKHTLEGVGKNLQDHLEVYFQYHCKQPITLNSKLGLI 318
Query: 388 NDSVTIVE-LLMLSGIGPRDHLE 409
+ + E +L G+G +H E
Sbjct: 319 SKGLIGTEWILTRKGLGATNHFE 341
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 248/523 (47%), Gaps = 59/523 (11%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLL---TDVPLFVSY-MVDT 709
+EYD+I++GAGS G+ +A RLTE+ TVLLLEAG + L T +P +++ +
Sbjct: 1 MSQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 710 DFNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNP 768
+NW Y+T+ + M + RGK +GG+S+IN M Y RG D+DNW L G
Sbjct: 61 RYNWAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLE 116
Query: 769 GWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQ-TSWRTPLSAAFLEAGSELGYD 827
W+Y D LPYF+K+E + + YHG G + V + PL A +EAG + GY
Sbjct: 117 NWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYP 173
Query: 828 QVDHCE--NPIGFSYVLANKIR-GARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPIT 884
+ D GF + + G R S ++ ++ +KR L + A K+L +
Sbjct: 174 RTDDLNGYQQEGFGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFE--G 231
Query: 885 KRTYGVEF--SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL 942
KR GV + + + RKEV++ +G + SPQLL SGVGP LE L+IPV+ DL
Sbjct: 232 KRAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDL 291
Query: 943 K-VGYNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALA 999
VG N+QDHL + L + V++ S Y +P ++L NG G + EA
Sbjct: 292 PGVGENLQDHLELY-LQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTG-IGASNQFEAGG 349
Query: 1000 FYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVP 1059
F ++ D P+++ F P A+ + ++ E + +
Sbjct: 350 FIRSRPEFD--WPNIQYHFLPVAINYNGSNGVK------------------EHGFQAHMG 389
Query: 1060 VLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRA 1119
+ P SRG V+L+S NP D P NY++ +D + I++ E+ + A
Sbjct: 390 SMRSP--------SRGRVQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPA 441
Query: 1120 MQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
+ Y + + PG + ++DE R+ H C
Sbjct: 442 LDPYRGREIS---PGI---DVQTDEQLDKFIREHAETAFHPSC 478
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 240/548 (43%), Gaps = 127/548 (23%)
Query: 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSS 99
++EYD+I+VG+GS G+ +A RLTE+ TVLLLEAG + LD ++P ++ +
Sbjct: 1 MSQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 100 DFNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPT 159
+NW Y T+ M +R RGK +G
Sbjct: 61 RYNWAYETDPE----PHMDGRRMECGRGKGLG---------------------------- 88
Query: 160 GKVMGGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYFKKSEDMKTAELKSSPY 218
G+S+ N M Y RG DYD WA L G W++ + LPYF+K+E T ++ + Y
Sbjct: 89 -----GSSLINGMCYIRGNAMDYDNWAKLPGLENWTYLDCLPYFRKAE---TRDIGPNDY 140
Query: 219 HGVGGYLKIERP-LWRTPLAKCVLDAGHEMGYDIVDP-SEPNAIGFSYVLAN-TGNGERY 275
HG G + + P PL +++AG + GY D + GF + T NG R
Sbjct: 141 HGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTKNGRRA 200
Query: 276 SASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFF--KNKQRHTVRARKEV 333
S +R +L +KR L + A KVL + KRA GV + ++R RARKEV
Sbjct: 201 STARGYLDTAKKRSTLTIVTHALTDKVLFEG----KRAVGVRYLIGAAEERVEARARKEV 256
Query: 334 ILSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVT 392
++ +GA+ SPQLL SG+GP LE ++IPV+ DL VG NLQDH+ + L + V+
Sbjct: 257 LVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPGVGENLQDHLELY-LQYACTQPVS 315
Query: 393 IVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKP 452
+ L+ N P I G +L N + +QF
Sbjct: 316 LYPSLLW-----------YNQPAI----------------GAEWLFNGTGIGASNQF--- 345
Query: 453 RYIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLL 512
E I S+ E D P+I+ F P A+ + NG
Sbjct: 346 --------------------EAGGFIRSRPEFDW--PNIQYHFLPVAI--NYNG------ 375
Query: 513 GISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLD 572
S+ +Q + +R SRG V+L+S NP D P NY++ +D
Sbjct: 376 --SNGVKEHGFQAHMGS---------MRSPSRGRVQLKSKNPRDYPSILFNYMATEQDWQ 424
Query: 573 VLIEAIKM 580
+ I++
Sbjct: 425 EFRDGIRL 432
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 237/482 (49%), Gaps = 54/482 (11%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REESLLTDVPLFVSYMVDTD-F 711
++ YD+I++GAGS G V+A+RL+E+ + +VLLLEAG ++S+ +P +SY ++++ +
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKY 60
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWS 771
W ++T+ + + + + PRGK +GG+S IN MVY RG DFD WE G GW+
Sbjct: 61 AWQFETDAEA----DLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWN 116
Query: 772 YRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRT--PLSAAFLEAGSELGYDQV 829
Y+ LPYF+++E+ Y G G L + T PL AF++AG E GY +
Sbjct: 117 YQACLPYFRRAENWIDGE---DEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPET 173
Query: 830 DHCE--NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRT 887
GF + G R S S A++ +KR N K+ K V +IL++ KR
Sbjct: 174 SDYNGYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--EKRA 231
Query: 888 YGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNI-PVIQDLKVGY 946
GVEF + T + EVI SAG++ S QLL LSG+GP+ LE+ + PV VG
Sbjct: 232 VGVEFELAGELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQ 291
Query: 947 NMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPG-GA----EALAFY 1001
N+QDHL + + +T+ K + L+ LT G GA E+ AF
Sbjct: 292 NLQDHLEVY-FQYHCQKPITL----NGKLDWFSKGLIGTEWILTRKGLGATNHFESCAFI 346
Query: 1002 PTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVL 1061
++ P+++ F P A+ D + + + +
Sbjct: 347 RSRAG--LKWPNIQYHFLPAAMRYDGQAAF-------------------DGHGFQVHVGP 385
Query: 1062 VRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
+P SRG V++ S+NP D PK NYLS RD + I++ E+ AM
Sbjct: 386 NKPE-------SRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMD 438
Query: 1122 KY 1123
++
Sbjct: 439 EF 440
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 190/383 (49%), Gaps = 63/383 (16%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PEEIILDEIPLFVSHIVSSD-FNW 103
+ YD+I+VG+GS G V+A+RL+E+ + +VLLLEAG ++ I ++P +S+ ++S+ + W
Sbjct: 3 QHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAW 62
Query: 104 GYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVM 163
+ T+ + +R + PRGKV +
Sbjct: 63 QFETDAE----ADLDGRRLHCPRGKV---------------------------------L 85
Query: 164 GGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGG 223
GG+S N MVY RG D+D W G GW+++ LPYF+++E+ E Y G G
Sbjct: 86 GGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQACLPYFRRAENWIDGE---DEYRGGDG 142
Query: 224 YLKI--ERPLWRTPLAKCVLDAGHEMGY-DIVDPSEPNAIGFSYVLANTGNGERYSASRA 280
L + PL + +DAG E GY + D + GF + NG R S S A
Sbjct: 143 PLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNGYQQEGFGPMHMTVKNGVRASTSNA 202
Query: 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGAL 340
+L +KR N K+ K V ++L++E KRA GVEF + T A+ EVI SAG++
Sbjct: 203 YLSRAKKRSNFKLIKGVVVQRILLEE----KRAVGVEFELAGELRTCFAKNEVISSAGSI 258
Query: 341 NSPQLLMLSGIGPRDHLEEMNI-PVIQDLKVGYNLQDH------------VSMAGLVFLV 387
S QLL LSGIGP+ LE+ + PV VG NLQDH +++ G +
Sbjct: 259 GSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQNLQDHLEVYFQYHCQKPITLNGKLDWF 318
Query: 388 NDSVTIVE-LLMLSGIGPRDHLE 409
+ + E +L G+G +H E
Sbjct: 319 SKGLIGTEWILTRKGLGATNHFE 341
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=betA PE=3 SV=1
Length = 559
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 240/486 (49%), Gaps = 57/486 (11%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDFN 712
E+D+I+IGAGS G+V+A RLTE+ + TVLLLEAG + T +P ++Y + +N
Sbjct: 2 EFDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 61
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPG--- 769
W Y+TE + M+++ RGK +GG+S+IN M Y RG D DNW PG
Sbjct: 62 WAYETEPEPY----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAQ--QPGLER 115
Query: 770 WSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTPLSAAFLEAGSELGYDQ 828
W+Y D LPY++KSE + + YHG G + + PL AA +EAG + GY +
Sbjct: 116 WTYLDCLPYYRKSETRDIG---ANDYHGGDGPVSITTCKPGNNPLFAAMIEAGVQAGYPR 172
Query: 829 VDHCENPIGFSYVLANKI---RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITK 885
D + ++ +G R S ++ ++ ++R NLK+ A +IL + K
Sbjct: 173 TDDLNGYQQEGFGPMDRFVTPKGRRSSTARGYLDTAKQRPNLKIITHATTDRILFE--NK 230
Query: 886 RTYGVEF--SKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK 943
R GV + + V R+EV+L AG + SPQ+L SGVG L++ +IPV+ DL
Sbjct: 231 RAVGVAYLHGASNTPQEVHARREVLLCAGAIASPQILQRSGVGNAELLKQFDIPVVHDLP 290
Query: 944 -VGYNMQDHLSMAGLVFLVNSSVTIVESK--YTKPRYLMDFLVNGAGPLTLPGGAEALAF 1000
VG N+QDHL M L + V++ + + +P+ ++L NG G + E F
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALKWWNQPKIGAEWLFNGTG-IGASNHFEGGGF 348
Query: 1001 YPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPV 1060
++ E+ P+++ F P A+ + ++ EA+
Sbjct: 349 IRSR--EEFAWPNIQYHFLPVAINYNGSNAV---------------------EAHGFQCH 385
Query: 1061 LVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAM 1120
+ RS SRG V+++S +P P NY+S +D +AI++ ++ A+
Sbjct: 386 VGSMRS-----PSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITRQIINQPAL 440
Query: 1121 QKYASK 1126
K+ +
Sbjct: 441 DKFRGR 446
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 191/390 (48%), Gaps = 74/390 (18%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSH-IVSSDFN 102
E+D+I++G+GS G+V+A RLTE+S+ TVLLLEAG + D ++P +++ + +N
Sbjct: 2 EFDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 61
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
W Y TE M N+R RGK +G
Sbjct: 62 WAYETEPE----PYMNNRRMECGRGKGLG------------------------------- 86
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNIG-WSFEEVLPYFKKSEDMKTAELKSSPYHGV 221
G+S+ N M Y RG D D WA + W++ + LPY++KSE T ++ ++ YHG
Sbjct: 87 --GSSLINGMCYIRGNAMDLDNWAQQPGLERWTYLDCLPYYRKSE---TRDIGANDYHGG 141
Query: 222 GGYLKIE--RPLWRTPLAKCVLDAGHEMGY---DIVDPSEPNAIGFSYVLANTGNGERYS 276
G + I +P PL +++AG + GY D ++ + G T G R S
Sbjct: 142 DGPVSITTCKP-GNNPLFAAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRFV-TPKGRRSS 199
Query: 277 ASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQR--HTVRARKEVI 334
+R +L ++RPNLK+ A ++L + KRA GV + V AR+EV+
Sbjct: 200 TARGYLDTAKQRPNLKIITHATTDRILFEN----KRAVGVAYLHGASNTPQEVHARREVL 255
Query: 335 LSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTI 393
L AGA+ SPQ+L SG+G + L++ +IPV+ DL VG NLQDH+ M L + + V++
Sbjct: 256 LCAGAIASPQILQRSGVGNAELLKQFDIPVVHDLPGVGENLQDHLEMY-LQYECKEPVSL 314
Query: 394 VELLML--------------SGIGPRDHLE 409
L +GIG +H E
Sbjct: 315 YPALKWWNQPKIGAEWLFNGTGIGASNHFE 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,322,708
Number of Sequences: 539616
Number of extensions: 20849802
Number of successful extensions: 47981
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 45713
Number of HSP's gapped (non-prelim): 767
length of query: 1183
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1054
effective length of database: 121,958,995
effective search space: 128544780730
effective search space used: 128544780730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)