Query psy8892
Match_columns 1183
No_of_seqs 605 out of 4719
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 22:08:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 6.3E-80 2.2E-84 747.1 36.6 486 657-1179 2-522 (566)
2 3q9t_A Choline dehydrogenase a 100.0 6.5E-75 2.2E-79 704.8 33.1 482 655-1179 4-529 (577)
3 3qvp_A Glucose oxidase; oxidor 100.0 2.9E-75 9.8E-80 706.6 29.5 491 651-1179 13-535 (583)
4 3fim_B ARYL-alcohol oxidase; A 100.0 2.6E-72 8.8E-77 680.5 39.4 498 47-653 2-549 (566)
5 3qvp_A Glucose oxidase; oxidor 100.0 1.7E-68 5.9E-73 647.3 33.9 496 45-653 17-562 (583)
6 3q9t_A Choline dehydrogenase a 100.0 7.4E-68 2.5E-72 642.9 37.6 496 45-653 4-556 (577)
7 1gpe_A Protein (glucose oxidas 100.0 3.5E-67 1.2E-71 643.5 25.6 490 655-1179 22-539 (587)
8 2jbv_A Choline oxidase; alcoho 100.0 4.6E-64 1.6E-68 612.0 40.2 463 656-1179 12-486 (546)
9 3t37_A Probable dehydrogenase; 100.0 1.3E-63 4.3E-68 612.1 40.2 458 656-1179 16-480 (526)
10 1gpe_A Protein (glucose oxidas 100.0 1.3E-62 4.5E-67 603.0 30.9 499 46-653 23-566 (587)
11 3t37_A Probable dehydrogenase; 100.0 7.1E-61 2.4E-65 587.7 44.3 483 45-678 15-518 (526)
12 2jbv_A Choline oxidase; alcoho 100.0 5.5E-60 1.9E-64 576.2 43.5 484 46-678 12-524 (546)
13 1ju2_A HydroxynitrIle lyase; f 100.0 1.8E-56 6E-61 544.0 25.9 438 655-1179 24-488 (536)
14 1ju2_A HydroxynitrIle lyase; f 100.0 7E-52 2.4E-56 503.6 29.9 446 44-653 23-500 (536)
15 1kdg_A CDH, cellobiose dehydro 100.0 2.1E-51 7.3E-56 503.8 31.1 458 655-1179 5-499 (546)
16 1kdg_A CDH, cellobiose dehydro 100.0 1.6E-49 5.6E-54 487.0 31.3 478 46-653 6-526 (546)
17 1n4w_A CHOD, cholesterol oxida 100.0 4.5E-47 1.5E-51 459.2 27.7 429 46-653 4-483 (504)
18 1coy_A Cholesterol oxidase; ox 100.0 2.9E-45 1E-49 443.2 29.1 432 44-653 8-488 (507)
19 1n4w_A CHOD, cholesterol oxida 100.0 1.7E-45 5.8E-50 445.4 25.2 403 656-1168 4-451 (504)
20 1coy_A Cholesterol oxidase; ox 100.0 1.5E-43 5E-48 428.3 26.1 401 655-1168 9-456 (507)
21 3pl8_A Pyranose 2-oxidase; sub 100.0 1.5E-34 5.1E-39 356.0 26.5 332 271-678 249-607 (623)
22 3pl8_A Pyranose 2-oxidase; sub 100.0 3E-30 1E-34 317.7 30.0 443 654-1179 43-569 (623)
23 4at0_A 3-ketosteroid-delta4-5a 99.5 1.5E-13 5.3E-18 166.3 18.3 68 854-922 204-272 (510)
24 4at0_A 3-ketosteroid-delta4-5a 99.5 3.6E-13 1.2E-17 163.1 19.4 65 281-348 207-272 (510)
25 1qo8_A Flavocytochrome C3 fuma 99.2 5.5E-11 1.9E-15 145.7 14.2 62 855-918 253-315 (566)
26 1qo8_A Flavocytochrome C3 fuma 99.2 1E-10 3.5E-15 143.3 15.8 59 281-344 255-315 (566)
27 1y0p_A Fumarate reductase flav 99.2 8.8E-11 3E-15 144.1 15.2 64 855-920 258-323 (571)
28 1y0p_A Fumarate reductase flav 99.2 2.3E-10 7.9E-15 140.4 17.2 59 281-343 260-319 (571)
29 2h88_A Succinate dehydrogenase 99.2 4E-10 1.4E-14 137.9 18.5 57 857-916 160-218 (621)
30 2bs2_A Quinol-fumarate reducta 99.1 6.1E-10 2.1E-14 137.3 16.1 56 858-916 164-221 (660)
31 2wdq_A Succinate dehydrogenase 99.1 9.4E-10 3.2E-14 134.6 16.6 58 857-916 148-207 (588)
32 3dme_A Conserved exported prot 99.1 2.3E-10 7.7E-15 132.5 10.6 65 857-926 155-220 (369)
33 1d4d_A Flavocytochrome C fumar 99.1 1.1E-09 3.6E-14 134.2 15.9 66 855-922 258-325 (572)
34 1d4d_A Flavocytochrome C fumar 99.0 3.4E-09 1.2E-13 129.6 18.6 62 281-347 260-324 (572)
35 3dme_A Conserved exported prot 99.0 2.7E-10 9.1E-15 131.9 8.3 63 283-352 157-220 (369)
36 2h88_A Succinate dehydrogenase 99.0 4.7E-09 1.6E-13 128.5 18.8 56 282-342 161-218 (621)
37 1y56_B Sarcosine oxidase; dehy 99.0 3.9E-10 1.3E-14 131.3 8.4 60 282-351 155-214 (382)
38 2bs2_A Quinol-fumarate reducta 99.0 3.2E-09 1.1E-13 130.9 16.7 53 285-342 167-221 (660)
39 3dje_A Fructosyl amine: oxygen 99.0 6.8E-10 2.3E-14 131.9 9.5 56 282-346 167-225 (438)
40 3da1_A Glycerol-3-phosphate de 99.0 2.6E-09 9.1E-14 130.1 14.7 61 286-352 180-242 (561)
41 1chu_A Protein (L-aspartate ox 99.0 2.8E-09 9.5E-14 129.2 14.7 51 864-916 151-209 (540)
42 1y56_B Sarcosine oxidase; dehy 99.0 1.4E-09 4.9E-14 126.5 11.5 61 857-925 154-214 (382)
43 3gyx_A Adenylylsulfate reducta 99.0 1.2E-09 4E-14 134.7 10.8 49 866-915 182-233 (662)
44 2wdq_A Succinate dehydrogenase 98.9 6.1E-09 2.1E-13 127.5 16.7 53 285-342 152-207 (588)
45 3nyc_A D-arginine dehydrogenas 98.9 3.6E-09 1.2E-13 123.0 14.0 57 284-351 162-218 (381)
46 1jnr_A Adenylylsulfate reducta 98.9 3.8E-09 1.3E-13 130.8 14.6 59 857-916 156-219 (643)
47 3nyc_A D-arginine dehydrogenas 98.9 2.8E-09 9.7E-14 123.9 12.2 60 857-925 159-218 (381)
48 2oln_A NIKD protein; flavoprot 98.9 4.5E-09 1.6E-13 123.0 13.4 36 45-81 2-37 (397)
49 3da1_A Glycerol-3-phosphate de 98.9 5.1E-09 1.8E-13 127.6 14.1 65 858-926 176-242 (561)
50 1kf6_A Fumarate reductase flav 98.9 9.3E-09 3.2E-13 126.1 15.9 57 858-917 140-199 (602)
51 3dje_A Fructosyl amine: oxygen 98.9 2.4E-09 8.1E-14 127.2 10.3 57 857-920 166-225 (438)
52 2gag_B Heterotetrameric sarcos 98.9 1.5E-09 5.2E-14 127.4 8.4 60 282-351 180-239 (405)
53 2gag_B Heterotetrameric sarcos 98.9 7.7E-09 2.6E-13 121.3 14.1 61 857-925 179-239 (405)
54 2rgh_A Alpha-glycerophosphate 98.9 6.5E-09 2.2E-13 126.9 13.1 57 286-348 198-256 (571)
55 1chu_A Protein (L-aspartate ox 98.9 1.2E-08 4.3E-13 123.4 15.3 53 288-341 151-208 (540)
56 2rgh_A Alpha-glycerophosphate 98.8 1.2E-08 4E-13 124.7 14.0 62 860-925 196-259 (571)
57 3gyx_A Adenylylsulfate reducta 98.8 9.2E-09 3.2E-13 126.7 13.0 49 290-341 182-233 (662)
58 2oln_A NIKD protein; flavoprot 98.8 2.9E-08 1E-12 116.0 15.8 36 655-691 2-37 (397)
59 1kf6_A Fumarate reductase flav 98.8 5.1E-08 1.7E-12 119.5 18.5 51 287-342 146-198 (602)
60 2i0z_A NAD(FAD)-utilizing dehy 98.8 3.5E-09 1.2E-13 125.7 7.4 56 857-918 139-194 (447)
61 1pj5_A N,N-dimethylglycine oxi 98.8 1.3E-08 4.4E-13 130.5 12.7 58 284-351 159-216 (830)
62 2gf3_A MSOX, monomeric sarcosi 98.8 2.3E-08 7.8E-13 116.6 13.7 34 47-81 3-36 (389)
63 1pj5_A N,N-dimethylglycine oxi 98.8 1.2E-08 4.1E-13 130.8 12.0 61 857-925 156-216 (830)
64 1jnr_A Adenylylsulfate reducta 98.8 5.6E-08 1.9E-12 120.3 16.1 58 282-342 157-219 (643)
65 3ps9_A TRNA 5-methylaminomethy 98.7 1.4E-08 5E-13 127.0 10.7 35 46-81 271-305 (676)
66 2i0z_A NAD(FAD)-utilizing dehy 98.7 7.5E-09 2.6E-13 122.9 6.9 55 282-344 140-194 (447)
67 3ps9_A TRNA 5-methylaminomethy 98.7 5E-08 1.7E-12 122.1 14.6 35 656-691 271-305 (676)
68 3v76_A Flavoprotein; structura 98.7 6.5E-08 2.2E-12 113.1 14.3 38 44-82 24-61 (417)
69 3axb_A Putative oxidoreductase 98.7 1.2E-08 4.2E-13 121.3 8.3 61 857-925 186-263 (448)
70 4dgk_A Phytoene dehydrogenase; 98.7 1.8E-08 6.1E-13 121.8 9.8 59 857-921 226-284 (501)
71 3oz2_A Digeranylgeranylglycero 98.7 4.5E-08 1.5E-12 114.2 12.5 58 280-343 106-163 (397)
72 3nlc_A Uncharacterized protein 98.7 2.8E-08 9.7E-13 119.3 10.8 38 44-82 104-141 (549)
73 2gf3_A MSOX, monomeric sarcosi 98.7 1.3E-07 4.3E-12 110.2 16.0 35 657-692 3-37 (389)
74 3axb_A Putative oxidoreductase 98.7 9.8E-09 3.4E-13 122.2 6.5 34 46-80 22-56 (448)
75 4dgk_A Phytoene dehydrogenase; 98.7 2.3E-08 7.9E-13 120.9 9.8 59 282-348 227-285 (501)
76 3v76_A Flavoprotein; structura 98.7 2.5E-08 8.5E-13 116.6 9.5 38 654-692 24-61 (417)
77 1rp0_A ARA6, thiazole biosynth 98.7 5.4E-08 1.9E-12 107.9 10.8 36 46-81 38-73 (284)
78 3pvc_A TRNA 5-methylaminomethy 98.7 5.6E-08 1.9E-12 121.8 11.9 35 46-81 263-297 (689)
79 2qcu_A Aerobic glycerol-3-phos 98.6 1.6E-07 5.5E-12 113.1 15.2 56 285-347 158-215 (501)
80 3nlc_A Uncharacterized protein 98.6 6.3E-08 2.1E-12 116.3 11.5 56 857-918 225-280 (549)
81 2uzz_A N-methyl-L-tryptophan o 98.6 2E-07 6.8E-12 107.8 15.3 34 47-81 2-35 (372)
82 3cgv_A Geranylgeranyl reductas 98.6 1.3E-07 4.3E-12 110.5 13.4 65 280-351 106-170 (397)
83 3pvc_A TRNA 5-methylaminomethy 98.6 5E-08 1.7E-12 122.3 10.5 35 656-691 263-297 (689)
84 2e5v_A L-aspartate oxidase; ar 98.6 1.1E-07 3.8E-12 113.3 12.9 52 858-915 125-176 (472)
85 3cgv_A Geranylgeranyl reductas 98.6 2E-07 6.7E-12 108.9 14.8 68 854-926 104-171 (397)
86 1ryi_A Glycine oxidase; flavop 98.6 7.2E-09 2.5E-13 120.6 2.2 37 44-81 14-50 (382)
87 2qcu_A Aerobic glycerol-3-phos 98.6 2.1E-07 7.1E-12 112.1 14.7 59 858-921 155-215 (501)
88 2e5v_A L-aspartate oxidase; ar 98.6 1.8E-07 6E-12 111.6 13.8 48 286-341 129-176 (472)
89 1ryi_A Glycine oxidase; flavop 98.6 2.5E-08 8.4E-13 116.0 6.1 61 856-925 168-228 (382)
90 2uzz_A N-methyl-L-tryptophan o 98.6 2.1E-07 7.1E-12 107.7 13.8 35 657-692 2-36 (372)
91 3oz2_A Digeranylgeranylglycero 98.6 1.4E-07 4.8E-12 109.9 12.2 59 855-917 105-163 (397)
92 1rp0_A ARA6, thiazole biosynth 98.6 1.2E-07 4.2E-12 105.0 11.1 37 656-692 38-74 (284)
93 2gqf_A Hypothetical protein HI 98.6 1.8E-07 6.1E-12 109.0 12.4 37 655-692 2-38 (401)
94 3jsk_A Cypbp37 protein; octame 98.5 3.2E-07 1.1E-11 102.6 10.9 36 656-691 78-114 (344)
95 3ka7_A Oxidoreductase; structu 98.5 1.8E-07 6.2E-12 110.4 9.5 56 282-346 202-257 (425)
96 3atr_A Conserved archaeal prot 98.5 5.2E-07 1.8E-11 107.3 12.8 56 281-341 105-162 (453)
97 2gqf_A Hypothetical protein HI 98.5 8.6E-07 2.9E-11 103.2 14.3 35 46-81 3-37 (401)
98 3ka7_A Oxidoreductase; structu 98.5 3.4E-07 1.2E-11 108.0 10.6 58 857-921 201-258 (425)
99 2zxi_A TRNA uridine 5-carboxym 98.5 1.3E-07 4.5E-12 113.8 6.8 35 46-81 26-60 (637)
100 3jsk_A Cypbp37 protein; octame 98.4 1.3E-06 4.6E-11 97.5 14.0 36 46-81 78-114 (344)
101 3i3l_A Alkylhalidase CMLS; fla 98.4 4.8E-07 1.6E-11 110.4 10.7 56 280-340 132-187 (591)
102 3atr_A Conserved archaeal prot 98.4 6.5E-07 2.2E-11 106.5 10.8 57 856-915 104-162 (453)
103 3ces_A MNMG, tRNA uridine 5-ca 98.4 1.8E-07 6.2E-12 113.0 5.7 35 46-81 27-61 (651)
104 2zxi_A TRNA uridine 5-carboxym 98.4 2.2E-07 7.5E-12 111.8 6.1 53 857-916 128-181 (637)
105 3p1w_A Rabgdi protein; GDI RAB 98.4 7.5E-07 2.6E-11 104.6 10.1 48 646-694 9-56 (475)
106 3i3l_A Alkylhalidase CMLS; fla 98.4 1.6E-06 5.3E-11 105.9 13.3 58 854-914 130-187 (591)
107 2gmh_A Electron transfer flavo 98.4 6.5E-07 2.2E-11 109.6 9.7 72 853-926 145-230 (584)
108 3e1t_A Halogenase; flavoprotei 98.3 1.2E-06 3.9E-11 106.0 11.6 57 280-341 115-172 (512)
109 3e1t_A Halogenase; flavoprotei 98.3 1.5E-06 5E-11 105.0 12.5 59 854-915 113-172 (512)
110 2gjc_A Thiazole biosynthetic e 98.3 1.6E-06 5.3E-11 96.5 11.2 37 655-692 63-101 (326)
111 3ces_A MNMG, tRNA uridine 5-ca 98.3 3.2E-07 1.1E-11 110.9 5.9 36 655-691 26-61 (651)
112 3nix_A Flavoprotein/dehydrogen 98.3 5E-06 1.7E-10 97.8 14.3 35 656-691 4-38 (421)
113 3nix_A Flavoprotein/dehydrogen 98.3 3.7E-06 1.3E-10 98.9 13.0 35 46-81 4-38 (421)
114 2gmh_A Electron transfer flavo 98.3 1.8E-06 6.2E-11 105.6 10.6 59 280-342 148-218 (584)
115 1yvv_A Amine oxidase, flavin-c 98.3 1.6E-06 5.4E-11 98.6 9.3 34 47-81 2-35 (336)
116 3nrn_A Uncharacterized protein 98.2 3.6E-06 1.2E-10 99.0 12.4 33 49-82 2-34 (421)
117 3cp8_A TRNA uridine 5-carboxym 98.2 1.8E-06 6.2E-11 104.3 9.5 37 44-81 18-54 (641)
118 2qa1_A PGAE, polyketide oxygen 98.2 3.9E-06 1.3E-10 100.7 12.4 39 42-81 6-44 (500)
119 2cul_A Glucose-inhibited divis 98.2 2.1E-06 7.3E-11 91.9 8.6 35 46-81 2-36 (232)
120 2gjc_A Thiazole biosynthetic e 98.2 4.3E-06 1.5E-10 92.9 11.2 36 46-81 64-100 (326)
121 3c4n_A Uncharacterized protein 98.2 3.7E-07 1.3E-11 106.9 2.1 36 46-81 35-71 (405)
122 3c4n_A Uncharacterized protein 98.2 3.2E-06 1.1E-10 98.9 9.8 35 656-691 35-71 (405)
123 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 2.2E-06 7.5E-11 97.8 7.9 33 48-81 2-37 (342)
124 3k7m_X 6-hydroxy-L-nicotine ox 98.1 4.2E-06 1.4E-10 98.8 10.3 34 48-82 2-35 (431)
125 4a9w_A Monooxygenase; baeyer-v 98.1 3E-06 1E-10 97.0 8.9 36 656-692 2-37 (357)
126 3ihg_A RDME; flavoenzyme, anth 98.1 1.7E-05 5.9E-10 96.3 15.9 69 854-926 122-192 (535)
127 3nrn_A Uncharacterized protein 98.1 3.1E-06 1.1E-10 99.6 8.9 56 857-921 194-249 (421)
128 3ihg_A RDME; flavoenzyme, anth 98.1 2.6E-05 9E-10 94.6 17.3 35 46-81 4-38 (535)
129 3cp8_A TRNA uridine 5-carboxym 98.1 4E-06 1.4E-10 101.4 9.2 36 655-691 19-54 (641)
130 2cul_A Glucose-inhibited divis 98.1 9.1E-06 3.1E-10 86.9 11.1 35 656-691 2-36 (232)
131 2qa2_A CABE, polyketide oxygen 98.1 6.6E-06 2.3E-10 98.7 10.7 37 44-81 9-45 (499)
132 4a9w_A Monooxygenase; baeyer-v 98.1 2.2E-06 7.4E-11 98.2 6.1 34 47-81 3-36 (357)
133 2qa1_A PGAE, polyketide oxygen 98.1 2.3E-05 8E-10 93.9 15.0 38 654-692 8-45 (500)
134 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 8.9E-06 3E-10 92.7 9.9 35 658-692 2-38 (342)
135 3fmw_A Oxygenase; mithramycin, 98.0 2.3E-05 7.9E-10 95.3 13.2 36 46-82 48-83 (570)
136 3f8d_A Thioredoxin reductase ( 98.0 7.1E-05 2.4E-09 84.1 16.4 65 857-925 195-261 (323)
137 3fmw_A Oxygenase; mithramycin, 98.0 1.5E-05 5.3E-10 96.9 11.5 36 656-692 48-83 (570)
138 1yvv_A Amine oxidase, flavin-c 98.0 9.4E-06 3.2E-10 92.2 8.8 35 657-692 2-36 (336)
139 2qa2_A CABE, polyketide oxygen 98.0 3.6E-05 1.2E-09 92.3 14.2 37 655-692 10-46 (499)
140 1k0i_A P-hydroxybenzoate hydro 98.0 6.6E-06 2.2E-10 95.8 7.4 34 47-81 2-35 (394)
141 2bry_A NEDD9 interacting prote 98.0 7.3E-06 2.5E-10 98.3 7.6 36 45-81 90-125 (497)
142 3kkj_A Amine oxidase, flavin-c 98.0 4.1E-06 1.4E-10 91.9 4.7 35 47-82 2-36 (336)
143 3lxd_A FAD-dependent pyridine 97.9 7.5E-05 2.6E-09 87.5 15.7 66 855-926 197-262 (415)
144 2gv8_A Monooxygenase; FMO, FAD 97.9 3.6E-05 1.2E-09 91.2 12.4 36 46-82 5-42 (447)
145 3lxd_A FAD-dependent pyridine 97.9 4.8E-05 1.6E-09 89.1 13.2 65 281-353 199-263 (415)
146 3i6d_A Protoporphyrinogen oxid 97.9 3.4E-05 1.2E-09 92.0 12.2 36 47-83 5-46 (470)
147 2x3n_A Probable FAD-dependent 97.9 1.8E-05 6.3E-10 92.2 9.3 35 656-691 5-39 (399)
148 2x3n_A Probable FAD-dependent 97.9 1.9E-05 6.4E-10 92.1 9.2 34 47-81 6-39 (399)
149 2dkh_A 3-hydroxybenzoate hydro 97.9 3.2E-05 1.1E-09 95.7 11.8 53 638-691 11-66 (639)
150 3gwf_A Cyclohexanone monooxyge 97.9 4.7E-06 1.6E-10 100.7 3.7 36 656-692 7-43 (540)
151 2dkh_A 3-hydroxybenzoate hydro 97.9 1.3E-05 4.5E-10 99.2 7.6 38 43-81 28-66 (639)
152 3d1c_A Flavin-containing putat 97.9 1.8E-05 6.1E-10 91.1 8.3 34 47-81 4-38 (369)
153 2bry_A NEDD9 interacting prote 97.9 9.1E-06 3.1E-10 97.4 6.0 35 656-691 91-125 (497)
154 2vou_A 2,6-dihydroxypyridine h 97.9 6.6E-05 2.3E-09 87.4 13.2 35 46-81 4-38 (397)
155 4ap3_A Steroid monooxygenase; 97.9 1.4E-05 4.6E-10 96.9 7.4 36 45-81 19-54 (549)
156 3s5w_A L-ornithine 5-monooxyge 97.8 0.0001 3.4E-09 87.8 14.5 36 46-82 29-69 (463)
157 4ap3_A Steroid monooxygenase; 97.8 1.2E-05 4.2E-10 97.3 6.2 37 655-692 19-55 (549)
158 1k0i_A P-hydroxybenzoate hydro 97.8 8.8E-06 3E-10 94.7 4.5 34 657-691 2-35 (394)
159 3uox_A Otemo; baeyer-villiger 97.8 2.8E-05 9.6E-10 94.0 8.9 36 656-692 8-43 (545)
160 3itj_A Thioredoxin reductase 1 97.8 4.9E-05 1.7E-09 86.1 10.5 60 858-920 215-276 (338)
161 3kkj_A Amine oxidase, flavin-c 97.8 1E-05 3.4E-10 88.7 4.5 36 657-693 2-37 (336)
162 1w4x_A Phenylacetone monooxyge 97.8 3.8E-05 1.3E-09 93.2 9.9 37 44-81 13-49 (542)
163 3s5w_A L-ornithine 5-monooxyge 97.8 0.0001 3.5E-09 87.7 13.4 58 855-913 130-190 (463)
164 3d1c_A Flavin-containing putat 97.8 6.3E-05 2.2E-09 86.5 11.2 34 657-691 4-38 (369)
165 3lzw_A Ferredoxin--NADP reduct 97.8 7.9E-05 2.7E-09 84.1 11.7 34 47-81 7-40 (332)
166 2vou_A 2,6-dihydroxypyridine h 97.8 0.00016 5.6E-09 84.0 14.6 35 656-691 4-38 (397)
167 4gcm_A TRXR, thioredoxin reduc 97.8 1.1E-05 3.7E-10 90.6 4.4 34 47-81 6-39 (312)
168 3i6d_A Protoporphyrinogen oxid 97.8 7.5E-05 2.6E-09 89.0 11.9 37 657-694 5-47 (470)
169 4fk1_A Putative thioredoxin re 97.8 1.1E-05 3.8E-10 90.2 4.3 36 45-81 4-39 (304)
170 2gv8_A Monooxygenase; FMO, FAD 97.8 6.2E-05 2.1E-09 89.1 10.9 37 656-693 5-43 (447)
171 1w4x_A Phenylacetone monooxyge 97.8 1.9E-05 6.5E-10 95.9 6.4 37 655-692 14-50 (542)
172 4a5l_A Thioredoxin reductase; 97.8 1.2E-05 4.1E-10 90.3 4.2 37 44-81 1-37 (314)
173 3gwf_A Cyclohexanone monooxyge 97.7 2.7E-05 9.3E-10 94.0 7.4 35 46-81 7-42 (540)
174 2xve_A Flavin-containing monoo 97.7 5.1E-05 1.7E-09 90.2 9.7 63 280-346 105-171 (464)
175 3fg2_P Putative rubredoxin red 97.7 0.00031 1E-08 81.9 16.1 65 856-926 188-252 (404)
176 2r0c_A REBC; flavin adenine di 97.7 0.00014 4.8E-09 88.4 13.5 35 46-81 25-59 (549)
177 3alj_A 2-methyl-3-hydroxypyrid 97.7 0.00014 4.8E-09 84.0 12.8 35 657-692 11-45 (379)
178 3ab1_A Ferredoxin--NADP reduct 97.7 0.00014 4.8E-09 83.3 11.8 37 654-691 11-47 (360)
179 2r0c_A REBC; flavin adenine di 97.7 0.00017 5.8E-09 87.6 13.0 36 656-692 25-60 (549)
180 3lzw_A Ferredoxin--NADP reduct 97.7 0.00014 4.7E-09 82.1 11.5 34 657-691 7-40 (332)
181 2bcg_G Secretory pathway GDP d 97.7 2.6E-05 9E-10 92.4 5.1 41 43-84 7-47 (453)
182 4gut_A Lysine-specific histone 97.6 0.00016 5.5E-09 90.5 12.5 36 46-82 335-370 (776)
183 3fg2_P Putative rubredoxin red 97.6 0.0003 1E-08 81.9 14.1 65 281-353 189-253 (404)
184 3uox_A Otemo; baeyer-villiger 97.6 0.00015 5.1E-09 87.6 11.7 35 46-81 8-42 (545)
185 4fk1_A Putative thioredoxin re 97.6 2.4E-05 8.1E-10 87.5 4.0 37 655-692 4-40 (304)
186 3fpz_A Thiazole biosynthetic e 97.6 2.7E-05 9.1E-10 88.1 4.3 37 46-82 64-101 (326)
187 1c0p_A D-amino acid oxidase; a 97.6 3.4E-05 1.2E-09 88.6 5.3 37 44-81 3-39 (363)
188 4gcm_A TRXR, thioredoxin reduc 97.6 2.6E-05 8.9E-10 87.5 4.0 35 656-691 5-39 (312)
189 1fl2_A Alkyl hydroperoxide red 97.6 0.00023 8E-09 79.4 11.8 33 657-690 1-33 (310)
190 4gde_A UDP-galactopyranose mut 97.6 2.6E-05 8.9E-10 94.2 4.2 39 47-85 10-48 (513)
191 2xve_A Flavin-containing monoo 97.6 0.00031 1E-08 83.4 13.3 68 856-925 105-176 (464)
192 3fpz_A Thiazole biosynthetic e 97.6 3.5E-05 1.2E-09 87.1 4.6 38 656-693 64-102 (326)
193 4a5l_A Thioredoxin reductase; 97.6 3E-05 1E-09 87.0 3.7 38 654-692 1-38 (314)
194 3rp8_A Flavoprotein monooxygen 97.5 4.3E-05 1.5E-09 89.3 4.8 38 43-81 19-56 (407)
195 3p1w_A Rabgdi protein; GDI RAB 97.5 4.2E-05 1.4E-09 89.8 4.6 43 40-83 13-55 (475)
196 4gde_A UDP-galactopyranose mut 97.5 3.3E-05 1.1E-09 93.3 3.7 39 657-695 10-48 (513)
197 2bcg_G Secretory pathway GDP d 97.5 5.3E-05 1.8E-09 89.8 4.6 41 654-695 8-48 (453)
198 3iwa_A FAD-dependent pyridine 97.5 0.00062 2.1E-08 81.0 13.7 63 856-925 206-268 (472)
199 1q1r_A Putidaredoxin reductase 97.4 0.00048 1.6E-08 80.9 12.2 63 857-925 196-260 (431)
200 1c0p_A D-amino acid oxidase; a 97.4 7.7E-05 2.6E-09 85.6 4.4 37 654-691 3-39 (363)
201 1v0j_A UDP-galactopyranose mut 97.4 9.1E-05 3.1E-09 86.1 4.6 40 44-83 4-43 (399)
202 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00054 1.9E-08 82.5 11.3 34 656-690 211-244 (521)
203 3hdq_A UDP-galactopyranose mut 97.3 0.00012 4E-09 84.3 5.1 39 44-83 26-64 (397)
204 1mo9_A ORF3; nucleotide bindin 97.3 0.00021 7E-09 86.3 6.3 63 17-81 14-76 (523)
205 1y56_A Hypothetical protein PH 97.3 0.00062 2.1E-08 81.4 10.4 34 46-81 107-140 (493)
206 3c96_A Flavin-containing monoo 97.3 0.00013 4.5E-09 85.3 4.3 36 45-81 2-38 (410)
207 2xdo_A TETX2 protein; tetracyc 97.3 0.00016 5.6E-09 84.1 5.1 36 45-81 24-59 (398)
208 3rp8_A Flavoprotein monooxygen 97.2 0.00013 4.5E-09 85.1 4.1 36 655-691 21-56 (407)
209 3g3e_A D-amino-acid oxidase; F 97.2 0.00012 4.2E-09 83.5 3.8 32 49-81 2-39 (351)
210 1s3e_A Amine oxidase [flavin-c 97.2 0.00016 5.3E-09 87.5 4.7 38 45-83 2-39 (520)
211 3k7m_X 6-hydroxy-L-nicotine ox 97.2 0.00016 5.4E-09 85.1 4.7 35 658-693 2-36 (431)
212 3o0h_A Glutathione reductase; 97.2 0.00015 5.3E-09 86.6 4.5 35 46-81 25-59 (484)
213 1v0j_A UDP-galactopyranose mut 97.2 0.00014 4.8E-09 84.5 3.9 39 655-694 5-44 (399)
214 2b9w_A Putative aminooxidase; 97.2 0.00031 1E-08 82.5 6.8 37 46-83 5-42 (424)
215 3urh_A Dihydrolipoyl dehydroge 97.2 0.00016 5.3E-09 86.7 4.3 37 44-81 22-58 (491)
216 3cty_A Thioredoxin reductase; 97.2 0.00016 5.6E-09 81.2 4.1 38 43-81 12-49 (319)
217 1d5t_A Guanine nucleotide diss 97.2 0.00021 7.1E-09 84.1 5.1 40 43-83 2-41 (433)
218 1i8t_A UDP-galactopyranose mut 97.2 0.00019 6.5E-09 82.3 4.5 35 47-82 1-35 (367)
219 3iwa_A FAD-dependent pyridine 97.2 0.00093 3.2E-08 79.5 10.6 35 47-81 3-38 (472)
220 3o0h_A Glutathione reductase; 97.2 0.00017 5.8E-09 86.2 4.1 42 649-691 17-59 (484)
221 3itj_A Thioredoxin reductase 1 97.2 0.00016 5.4E-09 81.8 3.7 57 285-346 218-276 (338)
222 4b63_A L-ornithine N5 monooxyg 97.2 0.0013 4.5E-08 78.6 11.9 36 45-81 37-72 (501)
223 4b63_A L-ornithine N5 monooxyg 97.2 0.0047 1.6E-07 73.8 16.6 58 855-913 148-212 (501)
224 3oc4_A Oxidoreductase, pyridin 97.2 0.001 3.6E-08 78.6 10.9 34 48-81 3-37 (452)
225 3lad_A Dihydrolipoamide dehydr 97.2 0.00016 5.5E-09 86.3 3.8 35 46-81 2-36 (476)
226 2jae_A L-amino acid oxidase; o 97.2 0.00027 9.2E-09 84.7 5.7 40 44-84 8-47 (489)
227 4b1b_A TRXR, thioredoxin reduc 97.2 0.00023 7.8E-09 85.5 4.9 34 47-81 42-75 (542)
228 3l8k_A Dihydrolipoyl dehydroge 97.1 0.00018 6.2E-09 85.5 3.9 36 45-81 2-37 (466)
229 3h28_A Sulfide-quinone reducta 97.1 0.0016 5.4E-08 76.5 11.8 36 658-693 3-39 (430)
230 3alj_A 2-methyl-3-hydroxypyrid 97.1 0.00027 9.2E-09 81.6 5.0 34 47-81 11-44 (379)
231 2ivd_A PPO, PPOX, protoporphyr 97.1 0.00028 9.7E-09 84.2 5.3 38 45-83 14-51 (478)
232 1sez_A Protoporphyrinogen oxid 97.1 0.00035 1.2E-08 84.0 6.1 40 44-84 10-49 (504)
233 3ab1_A Ferredoxin--NADP reduct 97.1 0.00027 9.1E-09 81.0 4.7 59 864-925 214-273 (360)
234 3ics_A Coenzyme A-disulfide re 97.1 0.0013 4.6E-08 80.5 11.2 36 46-81 35-71 (588)
235 2e1m_A L-glutamate oxidase; L- 97.1 0.00034 1.2E-08 79.7 5.4 37 45-82 42-79 (376)
236 3hdq_A UDP-galactopyranose mut 97.1 0.00029 1E-08 80.9 4.8 39 655-694 27-65 (397)
237 1s3e_A Amine oxidase [flavin-c 97.1 0.00026 8.9E-09 85.5 4.5 39 655-694 2-40 (520)
238 4dna_A Probable glutathione re 97.1 0.00026 8.9E-09 84.1 4.5 34 46-80 4-37 (463)
239 2vvm_A Monoamine oxidase N; FA 97.1 0.00036 1.2E-08 83.7 5.7 36 47-83 39-74 (495)
240 3nks_A Protoporphyrinogen oxid 97.0 0.00034 1.2E-08 83.4 5.1 35 48-83 3-39 (477)
241 1rsg_A FMS1 protein; FAD bindi 97.0 0.00027 9.4E-09 85.2 4.2 38 46-84 7-45 (516)
242 3ef6_A Toluene 1,2-dioxygenase 97.0 0.0028 9.6E-08 73.8 12.7 63 856-925 189-251 (410)
243 3c96_A Flavin-containing monoo 97.0 0.00027 9.1E-09 82.6 4.0 37 655-692 2-39 (410)
244 1i8t_A UDP-galactopyranose mut 97.0 0.00033 1.1E-08 80.3 4.6 37 657-694 1-37 (367)
245 3ic9_A Dihydrolipoamide dehydr 97.0 0.00025 8.5E-09 84.9 3.7 34 47-81 8-41 (492)
246 3qfa_A Thioredoxin reductase 1 97.0 0.00035 1.2E-08 84.2 4.9 37 44-81 29-65 (519)
247 3dk9_A Grase, GR, glutathione 97.0 0.00026 9E-09 84.5 3.5 37 44-81 17-53 (478)
248 2r9z_A Glutathione amide reduc 97.0 0.00035 1.2E-08 82.9 4.5 37 44-81 1-37 (463)
249 3cty_A Thioredoxin reductase; 97.0 0.00032 1.1E-08 78.8 3.9 61 862-925 200-262 (319)
250 2q7v_A Thioredoxin reductase; 97.0 0.00032 1.1E-08 79.0 4.0 36 45-81 6-41 (325)
251 2zbw_A Thioredoxin reductase; 97.0 0.00034 1.2E-08 79.1 4.2 59 863-925 202-262 (335)
252 2ywl_A Thioredoxin reductase r 97.0 0.00039 1.3E-08 70.8 4.2 33 48-81 2-34 (180)
253 3dgh_A TRXR-1, thioredoxin red 97.0 0.00038 1.3E-08 83.2 4.7 36 45-81 7-42 (483)
254 1ges_A Glutathione reductase; 97.0 0.00034 1.2E-08 82.7 4.2 36 45-81 2-37 (450)
255 1zk7_A HGII, reductase, mercur 97.0 0.00043 1.5E-08 82.3 5.1 37 44-81 1-37 (467)
256 2xdo_A TETX2 protein; tetracyc 97.0 0.0004 1.4E-08 80.7 4.6 37 655-692 24-60 (398)
257 3ihm_A Styrene monooxygenase A 97.0 0.00034 1.2E-08 82.2 4.1 34 47-81 22-55 (430)
258 1d5t_A Guanine nucleotide diss 97.0 0.00046 1.6E-08 81.1 5.1 40 654-694 3-42 (433)
259 2aqj_A Tryptophan halogenase, 97.0 0.0004 1.4E-08 84.2 4.7 35 46-81 4-41 (538)
260 3l8k_A Dihydrolipoyl dehydroge 97.0 0.00039 1.3E-08 82.6 4.5 38 655-693 2-39 (466)
261 3fbs_A Oxidoreductase; structu 97.0 0.00041 1.4E-08 76.8 4.3 34 47-81 2-35 (297)
262 3ics_A Coenzyme A-disulfide re 96.9 0.0014 4.7E-08 80.4 9.3 35 657-691 36-71 (588)
263 1rsg_A FMS1 protein; FAD bindi 96.9 0.0004 1.4E-08 83.7 4.4 39 656-695 7-46 (516)
264 2b9w_A Putative aminooxidase; 96.9 0.00063 2.2E-08 79.7 6.0 38 656-694 5-43 (424)
265 2yg5_A Putrescine oxidase; oxi 96.9 0.00039 1.3E-08 82.3 4.1 37 46-83 4-40 (453)
266 3f8d_A Thioredoxin reductase ( 96.9 0.00043 1.5E-08 77.6 4.3 66 281-352 195-262 (323)
267 2yg5_A Putrescine oxidase; oxi 96.9 0.00044 1.5E-08 81.9 4.6 38 656-694 4-41 (453)
268 2hqm_A GR, grase, glutathione 96.9 0.00039 1.3E-08 82.9 4.1 36 45-81 9-44 (479)
269 3dgz_A Thioredoxin reductase 2 96.9 0.00042 1.4E-08 82.9 4.2 35 46-81 5-39 (488)
270 2e4g_A Tryptophan halogenase; 96.9 0.00055 1.9E-08 83.1 5.2 38 43-81 20-61 (550)
271 2jae_A L-amino acid oxidase; o 96.9 0.00058 2E-08 81.8 5.3 40 655-695 9-48 (489)
272 4b1b_A TRXR, thioredoxin reduc 96.9 0.00051 1.7E-08 82.5 4.5 34 657-691 42-75 (542)
273 3urh_A Dihydrolipoyl dehydroge 96.9 0.00048 1.6E-08 82.5 4.3 37 656-693 24-60 (491)
274 3g5s_A Methylenetetrahydrofola 96.9 0.00058 2E-08 76.5 4.5 34 48-82 2-35 (443)
275 3lad_A Dihydrolipoamide dehydr 96.9 0.00037 1.3E-08 83.2 3.2 35 656-691 2-36 (476)
276 1ojt_A Surface protein; redox- 96.9 0.0004 1.4E-08 82.9 3.5 37 44-81 3-39 (482)
277 1sez_A Protoporphyrinogen oxid 96.9 0.00062 2.1E-08 81.9 5.2 40 654-694 10-49 (504)
278 2a87_A TRXR, TR, thioredoxin r 96.9 0.00046 1.6E-08 78.1 3.8 36 44-80 11-46 (335)
279 3qfa_A Thioredoxin reductase 1 96.9 0.00049 1.7E-08 82.8 4.2 36 655-691 30-65 (519)
280 2zbw_A Thioredoxin reductase; 96.9 0.0005 1.7E-08 77.7 4.0 36 655-691 3-38 (335)
281 2vvm_A Monoamine oxidase N; FA 96.9 0.00067 2.3E-08 81.4 5.3 37 657-694 39-75 (495)
282 3nks_A Protoporphyrinogen oxid 96.9 0.00063 2.2E-08 81.1 5.1 36 658-694 3-40 (477)
283 1v59_A Dihydrolipoamide dehydr 96.8 0.00037 1.3E-08 83.2 2.8 36 45-81 3-38 (478)
284 2e1m_A L-glutamate oxidase; L- 96.8 0.00066 2.3E-08 77.3 4.8 37 656-693 43-80 (376)
285 2ivd_A PPO, PPOX, protoporphyr 96.8 0.0006 2.1E-08 81.3 4.7 38 656-694 15-52 (478)
286 3g3e_A D-amino-acid oxidase; F 96.8 0.00041 1.4E-08 79.1 3.0 33 659-692 2-40 (351)
287 3lov_A Protoporphyrinogen oxid 96.8 0.00061 2.1E-08 81.2 4.6 35 47-82 4-40 (475)
288 4dna_A Probable glutathione re 96.8 0.00057 2E-08 81.1 4.1 35 656-691 4-38 (463)
289 1ges_A Glutathione reductase; 96.8 0.00061 2.1E-08 80.5 4.2 36 655-691 2-37 (450)
290 3ic9_A Dihydrolipoamide dehydr 96.8 0.00063 2.2E-08 81.3 4.3 35 656-691 7-41 (492)
291 2weu_A Tryptophan 5-halogenase 96.8 0.00048 1.6E-08 83.0 3.2 34 47-81 2-38 (511)
292 2qae_A Lipoamide, dihydrolipoy 96.8 0.00068 2.3E-08 80.6 4.4 34 47-81 2-35 (468)
293 2q0l_A TRXR, thioredoxin reduc 96.8 0.00068 2.3E-08 75.7 4.2 33 48-81 2-35 (311)
294 2vdc_G Glutamate synthase [NAD 96.8 0.0007 2.4E-08 79.8 4.4 36 46-82 121-156 (456)
295 2bi7_A UDP-galactopyranose mut 96.8 0.00087 3E-08 77.3 5.1 36 47-83 3-38 (384)
296 1trb_A Thioredoxin reductase; 96.8 0.00051 1.7E-08 77.0 3.1 34 46-80 4-37 (320)
297 2r9z_A Glutathione amide reduc 96.8 0.00063 2.2E-08 80.7 4.0 36 655-691 2-37 (463)
298 2q7v_A Thioredoxin reductase; 96.8 0.00065 2.2E-08 76.4 3.9 57 860-920 196-254 (325)
299 1fl2_A Alkyl hydroperoxide red 96.7 0.0008 2.7E-08 75.0 4.5 33 47-80 1-33 (310)
300 3dgh_A TRXR-1, thioredoxin red 96.7 0.0007 2.4E-08 80.8 4.2 61 857-920 232-294 (483)
301 2yqu_A 2-oxoglutarate dehydrog 96.7 0.00077 2.6E-08 79.8 4.3 34 47-81 1-34 (455)
302 3fbs_A Oxidoreductase; structu 96.7 0.00077 2.6E-08 74.5 4.0 35 657-692 2-36 (297)
303 2wpf_A Trypanothione reductase 96.7 0.00059 2E-08 81.6 3.2 36 44-80 4-40 (495)
304 1onf_A GR, grase, glutathione 96.7 0.00082 2.8E-08 80.5 4.5 34 47-81 2-35 (500)
305 1zk7_A HGII, reductase, mercur 96.7 0.00079 2.7E-08 80.0 4.2 36 655-691 2-37 (467)
306 2ywl_A Thioredoxin reductase r 96.7 0.00086 3E-08 68.1 3.9 33 658-691 2-34 (180)
307 1v59_A Dihydrolipoamide dehydr 96.7 0.00071 2.4E-08 80.7 3.8 37 655-692 3-39 (478)
308 1ojt_A Surface protein; redox- 96.7 0.00072 2.5E-08 80.7 3.9 38 654-692 3-40 (482)
309 2pyx_A Tryptophan halogenase; 96.7 0.00079 2.7E-08 81.3 4.2 35 46-81 6-52 (526)
310 1zmd_A Dihydrolipoyl dehydroge 96.7 0.00074 2.5E-08 80.5 3.8 35 46-81 5-39 (474)
311 1dxl_A Dihydrolipoamide dehydr 96.7 0.00078 2.7E-08 80.2 4.0 36 45-81 4-39 (470)
312 2iid_A L-amino-acid oxidase; f 96.7 0.00098 3.3E-08 80.0 4.8 37 46-83 32-68 (498)
313 4dsg_A UDP-galactopyranose mut 96.7 0.00095 3.2E-08 79.6 4.6 37 46-83 8-45 (484)
314 3c4a_A Probable tryptophan hyd 96.7 0.0009 3.1E-08 77.2 4.3 34 49-82 2-36 (381)
315 2hqm_A GR, grase, glutathione 96.7 0.00082 2.8E-08 80.1 4.0 35 656-691 10-44 (479)
316 3r9u_A Thioredoxin reductase; 96.7 0.00068 2.3E-08 75.7 3.1 34 46-80 3-37 (315)
317 3dgz_A Thioredoxin reductase 2 96.7 0.00081 2.8E-08 80.4 4.0 60 857-919 230-291 (488)
318 4hb9_A Similarities with proba 96.7 0.0011 3.6E-08 77.3 4.8 32 49-81 3-34 (412)
319 3lov_A Protoporphyrinogen oxid 96.6 0.00088 3E-08 79.8 4.2 36 657-693 4-41 (475)
320 3ntd_A FAD-dependent pyridine 96.6 0.0023 8E-08 78.0 8.0 33 659-691 3-36 (565)
321 3ihm_A Styrene monooxygenase A 96.6 0.00077 2.6E-08 79.1 3.5 34 657-691 22-55 (430)
322 1trb_A Thioredoxin reductase; 96.6 0.00084 2.9E-08 75.2 3.7 60 858-920 190-252 (320)
323 3dk9_A Grase, GR, glutathione 96.6 0.00083 2.8E-08 80.1 3.8 36 655-691 18-53 (478)
324 1b37_A Protein (polyamine oxid 96.6 0.0011 3.7E-08 79.0 4.8 37 46-83 3-40 (472)
325 1ebd_A E3BD, dihydrolipoamide 96.6 0.00085 2.9E-08 79.4 3.7 34 47-81 3-36 (455)
326 2bi7_A UDP-galactopyranose mut 96.6 0.0012 4.1E-08 76.1 4.9 37 657-694 3-39 (384)
327 1fec_A Trypanothione reductase 96.6 0.00091 3.1E-08 79.9 3.9 33 46-79 2-35 (490)
328 2a8x_A Dihydrolipoyl dehydroge 96.6 0.00096 3.3E-08 79.2 4.0 34 47-81 3-36 (464)
329 2aqj_A Tryptophan halogenase, 96.6 0.001 3.4E-08 80.6 4.2 56 854-915 167-222 (538)
330 2a87_A TRXR, TR, thioredoxin r 96.6 0.00084 2.9E-08 75.9 3.1 35 655-690 12-46 (335)
331 1pn0_A Phenol 2-monooxygenase; 96.5 0.0011 3.7E-08 82.2 4.1 34 47-81 8-46 (665)
332 3k30_A Histamine dehydrogenase 96.5 0.0015 5.2E-08 81.4 5.6 38 44-82 388-425 (690)
333 1lvl_A Dihydrolipoamide dehydr 96.5 0.001 3.4E-08 78.8 3.7 35 46-81 4-38 (458)
334 1vdc_A NTR, NADPH dependent th 96.5 0.001 3.5E-08 75.0 3.6 57 863-920 206-264 (333)
335 3g5s_A Methylenetetrahydrofola 96.5 0.0012 4.2E-08 73.9 4.0 34 658-692 2-35 (443)
336 1mo9_A ORF3; nucleotide bindin 96.5 0.0012 4.1E-08 79.5 4.1 68 856-925 259-327 (523)
337 1vg0_A RAB proteins geranylger 96.5 0.0016 5.6E-08 78.7 5.2 39 43-82 4-42 (650)
338 4dsg_A UDP-galactopyranose mut 96.5 0.0013 4.6E-08 78.2 4.4 39 655-694 7-46 (484)
339 2v3a_A Rubredoxin reductase; a 96.5 0.0017 5.9E-08 74.9 5.0 36 45-81 2-39 (384)
340 2qae_A Lipoamide, dihydrolipoy 96.5 0.0013 4.4E-08 78.2 4.1 66 856-925 219-288 (468)
341 2q0l_A TRXR, thioredoxin reduc 96.5 0.0013 4.6E-08 73.2 4.0 60 861-923 188-249 (311)
342 2a8x_A Dihydrolipoyl dehydroge 96.5 0.0013 4.6E-08 77.9 4.0 34 657-691 3-36 (464)
343 2yqu_A 2-oxoglutarate dehydrog 96.4 0.0014 4.7E-08 77.6 4.0 35 657-692 1-35 (455)
344 2eq6_A Pyruvate dehydrogenase 96.4 0.0014 4.7E-08 77.8 4.0 34 47-81 6-39 (464)
345 3hyw_A Sulfide-quinone reducta 96.4 0.0085 2.9E-07 70.1 10.7 62 855-925 203-265 (430)
346 3c4a_A Probable tryptophan hyd 96.4 0.0013 4.5E-08 75.8 3.6 33 659-692 2-36 (381)
347 1onf_A GR, grase, glutathione 96.4 0.0014 4.9E-08 78.5 3.9 34 657-691 2-35 (500)
348 1vdc_A NTR, NADPH dependent th 96.4 0.0013 4.3E-08 74.3 3.2 33 656-689 7-39 (333)
349 1q1r_A Putidaredoxin reductase 96.4 0.0022 7.7E-08 75.1 5.4 63 282-352 197-261 (431)
350 2pyx_A Tryptophan halogenase; 96.4 0.0015 5.1E-08 78.9 3.8 55 854-914 177-232 (526)
351 2e4g_A Tryptophan halogenase; 96.4 0.0018 6E-08 78.7 4.4 55 854-914 196-251 (550)
352 1zmd_A Dihydrolipoyl dehydroge 96.4 0.0016 5.4E-08 77.5 3.9 36 656-692 5-40 (474)
353 2x8g_A Thioredoxin glutathione 96.4 0.0018 6.2E-08 79.5 4.5 35 45-80 105-139 (598)
354 2weu_A Tryptophan 5-halogenase 96.3 0.0012 4.1E-08 79.5 2.6 55 854-914 175-229 (511)
355 1ebd_A E3BD, dihydrolipoamide 96.3 0.0016 5.5E-08 77.0 3.7 35 656-691 2-36 (455)
356 1xdi_A RV3303C-LPDA; reductase 96.3 0.0014 4.9E-08 78.5 3.2 34 657-691 2-38 (499)
357 3r9u_A Thioredoxin reductase; 96.3 0.0014 4.6E-08 73.2 2.7 61 857-920 188-249 (315)
358 2iid_A L-amino-acid oxidase; f 96.3 0.0019 6.5E-08 77.4 4.2 38 656-694 32-69 (498)
359 1dxl_A Dihydrolipoamide dehydr 96.3 0.0016 5.4E-08 77.5 3.3 37 656-693 5-41 (470)
360 4hb9_A Similarities with proba 96.3 0.0022 7.7E-08 74.4 4.6 33 659-692 3-35 (412)
361 1hyu_A AHPF, alkyl hydroperoxi 96.3 0.0022 7.5E-08 77.2 4.5 35 45-80 210-244 (521)
362 2wpf_A Trypanothione reductase 96.3 0.0016 5.5E-08 77.9 3.1 35 654-689 4-39 (495)
363 1xdi_A RV3303C-LPDA; reductase 96.2 0.0019 6.6E-08 77.3 3.8 35 47-81 2-38 (499)
364 1b37_A Protein (polyamine oxid 96.2 0.0023 7.9E-08 76.1 4.4 38 656-694 3-41 (472)
365 1lvl_A Dihydrolipoamide dehydr 96.2 0.0018 6.3E-08 76.5 3.3 35 656-691 4-38 (458)
366 2eq6_A Pyruvate dehydrogenase 96.2 0.0023 8E-08 75.8 3.9 34 657-691 6-39 (464)
367 2z3y_A Lysine-specific histone 96.1 0.0077 2.6E-07 74.6 8.6 38 45-83 105-142 (662)
368 1fec_A Trypanothione reductase 96.1 0.0022 7.5E-08 76.6 3.4 32 656-688 2-34 (490)
369 2v3a_A Rubredoxin reductase; a 96.1 0.0031 1.1E-07 72.7 4.5 63 856-925 191-253 (384)
370 4gut_A Lysine-specific histone 96.1 0.0028 9.6E-08 79.4 4.3 38 656-694 335-372 (776)
371 1xhc_A NADH oxidase /nitrite r 96.1 0.0038 1.3E-07 71.4 4.8 32 48-81 9-40 (367)
372 1pn0_A Phenol 2-monooxygenase; 96.1 0.0029 9.8E-08 78.4 4.0 36 656-692 7-47 (665)
373 2vdc_G Glutamate synthase [NAD 96.0 0.0035 1.2E-07 73.9 4.1 37 656-693 121-157 (456)
374 1o94_A Tmadh, trimethylamine d 96.0 0.0054 1.8E-07 76.9 6.0 36 46-82 388-423 (729)
375 2xag_A Lysine-specific histone 96.0 0.012 4E-07 74.3 9.0 38 45-83 276-313 (852)
376 2x8g_A Thioredoxin glutathione 95.9 0.0035 1.2E-07 77.0 4.1 34 656-690 106-139 (598)
377 2cdu_A NADPH oxidase; flavoenz 95.9 0.0037 1.2E-07 73.9 4.1 34 48-81 1-35 (452)
378 3k30_A Histamine dehydrogenase 95.9 0.0038 1.3E-07 77.9 4.3 38 655-693 389-426 (690)
379 2gag_A Heterotetrameric sarcos 95.9 0.0035 1.2E-07 81.0 3.9 59 287-350 327-392 (965)
380 2bc0_A NADH oxidase; flavoprot 95.9 0.0035 1.2E-07 74.9 3.6 34 47-81 35-71 (490)
381 3h28_A Sulfide-quinone reducta 95.9 0.0053 1.8E-07 72.0 5.0 34 48-82 3-38 (430)
382 1ps9_A 2,4-dienoyl-COA reducta 95.8 0.0059 2E-07 75.9 5.6 37 45-82 371-407 (671)
383 3sx6_A Sulfide-quinone reducta 95.8 0.005 1.7E-07 72.3 4.7 35 47-82 4-41 (437)
384 1vg0_A RAB proteins geranylger 95.8 0.0051 1.7E-07 74.4 4.6 40 655-695 6-45 (650)
385 3h8l_A NADH oxidase; membrane 95.8 0.0045 1.6E-07 72.0 4.0 32 49-81 3-37 (409)
386 2cdu_A NADPH oxidase; flavoenz 95.8 0.004 1.4E-07 73.5 3.4 58 856-920 195-252 (452)
387 1m6i_A Programmed cell death p 95.7 0.0058 2E-07 72.9 4.7 38 44-81 8-46 (493)
388 1xhc_A NADH oxidase /nitrite r 95.7 0.006 2E-07 69.8 4.4 58 856-925 187-244 (367)
389 1gte_A Dihydropyrimidine dehyd 95.7 0.0095 3.2E-07 77.5 6.8 36 46-82 186-222 (1025)
390 3cgb_A Pyridine nucleotide-dis 95.7 0.0056 1.9E-07 72.8 4.3 34 48-81 37-71 (480)
391 2gqw_A Ferredoxin reductase; f 95.7 0.0054 1.8E-07 71.3 3.9 35 46-81 6-42 (408)
392 1y56_A Hypothetical protein PH 95.7 0.0045 1.5E-07 73.9 3.3 58 861-925 266-323 (493)
393 3kd9_A Coenzyme A disulfide re 95.6 0.0079 2.7E-07 70.9 5.3 36 47-82 3-39 (449)
394 1nhp_A NADH peroxidase; oxidor 95.5 0.0066 2.3E-07 71.5 4.1 34 48-81 1-35 (447)
395 3kd9_A Coenzyme A disulfide re 95.5 0.0063 2.1E-07 71.8 3.7 37 657-693 3-40 (449)
396 2gag_A Heterotetrameric sarcos 95.5 0.0071 2.4E-07 78.1 4.4 61 862-924 326-392 (965)
397 3oc4_A Oxidoreductase, pyridin 95.5 0.0061 2.1E-07 71.9 3.5 36 658-693 3-39 (452)
398 2z3y_A Lysine-specific histone 95.5 0.0083 2.8E-07 74.3 4.8 38 656-694 106-143 (662)
399 1m6i_A Programmed cell death p 95.4 0.0065 2.2E-07 72.5 3.5 63 856-925 230-292 (493)
400 1ps9_A 2,4-dienoyl-COA reducta 95.4 0.0099 3.4E-07 73.9 5.1 37 656-693 372-408 (671)
401 2bc0_A NADH oxidase; flavoprot 95.3 0.0061 2.1E-07 72.7 2.9 35 657-692 35-72 (490)
402 1o94_A Tmadh, trimethylamine d 95.3 0.0091 3.1E-07 74.8 4.5 37 656-693 388-424 (729)
403 1cjc_A Protein (adrenodoxin re 95.3 0.0093 3.2E-07 70.3 4.3 36 46-82 5-42 (460)
404 1nhp_A NADH peroxidase; oxidor 95.3 0.0076 2.6E-07 71.0 3.3 36 658-693 1-37 (447)
405 2xag_A Lysine-specific histone 95.2 0.011 3.8E-07 74.5 5.0 38 656-694 277-314 (852)
406 3cgb_A Pyridine nucleotide-dis 95.2 0.0084 2.9E-07 71.3 3.6 61 857-925 232-292 (480)
407 3sx6_A Sulfide-quinone reducta 95.2 0.01 3.6E-07 69.6 4.2 36 657-692 4-41 (437)
408 3h8l_A NADH oxidase; membrane 95.1 0.0093 3.2E-07 69.3 3.4 33 659-692 3-38 (409)
409 2gqw_A Ferredoxin reductase; f 95.0 0.01 3.6E-07 68.9 3.3 59 857-926 192-250 (408)
410 3ayj_A Pro-enzyme of L-phenyla 94.9 0.01 3.5E-07 72.8 3.0 34 47-81 56-97 (721)
411 3ef6_A Toluene 1,2-dioxygenase 94.8 0.016 5.3E-07 67.4 4.2 63 281-352 190-252 (410)
412 1lqt_A FPRA; NADP+ derivative, 94.6 0.014 4.8E-07 68.7 3.1 36 47-82 3-44 (456)
413 1gte_A Dihydropyrimidine dehyd 94.6 0.018 6.3E-07 74.8 4.4 61 862-925 380-454 (1025)
414 1cjc_A Protein (adrenodoxin re 94.5 0.019 6.4E-07 67.7 3.9 36 657-693 6-43 (460)
415 3ntd_A FAD-dependent pyridine 94.5 0.02 6.9E-07 69.6 4.3 35 48-82 2-37 (565)
416 1lqt_A FPRA; NADP+ derivative, 94.3 0.017 6E-07 67.9 3.2 37 657-693 3-45 (456)
417 3vrd_B FCCB subunit, flavocyto 94.2 0.032 1.1E-06 64.5 4.9 64 281-354 207-270 (401)
418 3ayj_A Pro-enzyme of L-phenyla 94.1 0.018 6.1E-07 70.7 2.5 36 657-693 56-100 (721)
419 4eqs_A Coenzyme A disulfide re 93.9 0.025 8.5E-07 66.2 3.4 32 49-81 2-35 (437)
420 3klj_A NAD(FAD)-dependent dehy 93.8 0.043 1.5E-06 63.0 5.0 36 46-82 8-43 (385)
421 3vrd_B FCCB subunit, flavocyto 93.6 0.038 1.3E-06 63.9 4.2 62 858-927 208-269 (401)
422 4g6h_A Rotenone-insensitive NA 93.6 0.048 1.7E-06 64.9 5.0 35 46-81 41-75 (502)
423 4eqs_A Coenzyme A disulfide re 93.4 0.034 1.2E-06 65.1 3.4 32 660-692 3-36 (437)
424 3klj_A NAD(FAD)-dependent dehy 93.4 0.053 1.8E-06 62.2 5.0 38 655-693 7-44 (385)
425 4g6h_A Rotenone-insensitive NA 93.2 0.048 1.6E-06 64.9 4.2 36 656-692 41-76 (502)
426 3hyw_A Sulfide-quinone reducta 93.0 0.053 1.8E-06 63.3 4.1 34 49-82 4-38 (430)
427 2g1u_A Hypothetical protein TM 87.8 0.39 1.3E-05 46.8 4.3 33 48-81 20-52 (155)
428 3fwz_A Inner membrane protein 87.6 0.38 1.3E-05 46.0 4.0 32 49-81 9-40 (140)
429 3llv_A Exopolyphosphatase-rela 87.3 0.4 1.4E-05 45.8 4.0 32 49-81 8-39 (141)
430 1lss_A TRK system potassium up 87.2 0.46 1.6E-05 45.1 4.3 32 49-81 6-37 (140)
431 1id1_A Putative potassium chan 85.1 0.6 2E-05 45.4 4.0 31 49-80 5-35 (153)
432 3ic5_A Putative saccharopine d 83.9 0.77 2.6E-05 41.9 4.0 32 49-81 7-39 (118)
433 3fwz_A Inner membrane protein 83.1 0.73 2.5E-05 44.0 3.5 32 659-691 9-40 (140)
434 2g1u_A Hypothetical protein TM 82.3 0.83 2.8E-05 44.5 3.7 33 658-691 20-52 (155)
435 3llv_A Exopolyphosphatase-rela 82.1 0.83 2.8E-05 43.5 3.5 32 659-691 8-39 (141)
436 3ado_A Lambda-crystallin; L-gu 81.9 0.93 3.2E-05 49.8 4.2 32 49-81 8-39 (319)
437 2hmt_A YUAA protein; RCK, KTN, 81.7 0.84 2.9E-05 43.4 3.4 32 49-81 8-39 (144)
438 1lss_A TRK system potassium up 81.6 0.92 3.2E-05 42.9 3.7 32 659-691 6-37 (140)
439 1f0y_A HCDH, L-3-hydroxyacyl-C 80.9 1.3 4.5E-05 48.5 5.1 32 49-81 17-48 (302)
440 3i83_A 2-dehydropantoate 2-red 80.7 1.2 4.1E-05 49.3 4.7 32 49-81 4-35 (320)
441 1id1_A Putative potassium chan 79.8 1.1 3.7E-05 43.5 3.5 32 659-691 5-36 (153)
442 3hn2_A 2-dehydropantoate 2-red 79.4 1.3 4.3E-05 49.0 4.3 32 49-81 4-35 (312)
443 3l4b_C TRKA K+ channel protien 77.8 1.2 4.2E-05 46.1 3.4 32 49-81 2-33 (218)
444 4e12_A Diketoreductase; oxidor 77.7 1.7 5.7E-05 47.2 4.6 32 49-81 6-37 (283)
445 2raf_A Putative dinucleotide-b 76.1 2.2 7.7E-05 43.8 4.8 33 48-81 20-52 (209)
446 3ic5_A Putative saccharopine d 75.9 1.7 5.7E-05 39.6 3.4 32 659-691 7-39 (118)
447 1ks9_A KPA reductase;, 2-dehyd 75.8 2.1 7.4E-05 46.3 4.8 32 49-81 2-33 (291)
448 3ghy_A Ketopantoate reductase 75.7 1.8 6E-05 48.3 4.1 31 49-80 5-35 (335)
449 3ado_A Lambda-crystallin; L-gu 75.2 1.6 5.6E-05 47.9 3.6 32 659-691 8-39 (319)
450 3dfz_A SIRC, precorrin-2 dehyd 74.8 2.2 7.6E-05 44.2 4.3 32 48-80 32-63 (223)
451 3ego_A Probable 2-dehydropanto 74.7 2.4 8.3E-05 46.5 4.9 31 49-81 4-34 (307)
452 1jw9_B Molybdopterin biosynthe 74.6 2 6.7E-05 45.6 3.9 33 48-81 32-65 (249)
453 3g17_A Similar to 2-dehydropan 74.0 1.4 4.8E-05 48.1 2.7 32 49-81 4-35 (294)
454 2hmt_A YUAA protein; RCK, KTN, 73.8 1.7 5.8E-05 41.2 3.0 32 659-691 8-39 (144)
455 3c85_A Putative glutathione-re 73.7 1.6 5.5E-05 43.6 2.9 32 659-691 41-73 (183)
456 1kyq_A Met8P, siroheme biosynt 73.2 1.9 6.4E-05 46.2 3.3 32 48-80 14-45 (274)
457 3i83_A 2-dehydropantoate 2-red 73.0 2.2 7.7E-05 47.1 4.1 32 659-691 4-35 (320)
458 3hn2_A 2-dehydropantoate 2-red 72.9 2.3 8E-05 46.7 4.2 32 659-691 4-35 (312)
459 1lld_A L-lactate dehydrogenase 72.6 2.7 9.3E-05 46.3 4.7 32 49-81 9-42 (319)
460 2dpo_A L-gulonate 3-dehydrogen 72.6 2.5 8.4E-05 46.6 4.2 32 49-81 8-39 (319)
461 2ew2_A 2-dehydropantoate 2-red 72.4 2.7 9.2E-05 46.1 4.6 32 49-81 5-36 (316)
462 2y0c_A BCEC, UDP-glucose dehyd 72.4 2.6 8.8E-05 49.4 4.6 34 47-81 8-41 (478)
463 3hwr_A 2-dehydropantoate 2-red 71.7 2.7 9.3E-05 46.3 4.4 30 49-80 21-50 (318)
464 3k6j_A Protein F01G10.3, confi 71.5 2.9 9.8E-05 48.4 4.6 32 49-81 56-87 (460)
465 1zej_A HBD-9, 3-hydroxyacyl-CO 71.3 3.3 0.00011 44.9 4.8 32 48-81 13-44 (293)
466 3c85_A Putative glutathione-re 71.0 2 6.7E-05 43.0 2.8 33 49-81 41-73 (183)
467 1f0y_A HCDH, L-3-hydroxyacyl-C 70.8 2.8 9.5E-05 45.9 4.1 32 659-691 17-48 (302)
468 1zcj_A Peroxisomal bifunctiona 70.7 3.2 0.00011 48.5 4.8 32 49-81 39-70 (463)
469 3oj0_A Glutr, glutamyl-tRNA re 70.3 2.1 7.1E-05 40.9 2.6 32 49-81 23-54 (144)
470 4g65_A TRK system potassium up 70.2 2.5 8.4E-05 49.3 3.7 32 49-81 5-36 (461)
471 2ewd_A Lactate dehydrogenase,; 70.2 3.4 0.00012 45.5 4.7 33 48-81 5-38 (317)
472 3l4b_C TRKA K+ channel protien 68.9 2.4 8.1E-05 43.8 2.9 31 660-691 3-33 (218)
473 3rui_A Ubiquitin-like modifier 68.7 3.9 0.00013 45.1 4.6 34 47-81 34-68 (340)
474 3qha_A Putative oxidoreductase 68.5 3.9 0.00013 44.5 4.7 34 47-81 15-48 (296)
475 4e12_A Diketoreductase; oxidor 68.3 3.1 0.00011 45.0 3.9 32 659-691 6-37 (283)
476 3gg2_A Sugar dehydrogenase, UD 68.1 3.7 0.00013 47.7 4.6 32 49-81 4-35 (450)
477 1bg6_A N-(1-D-carboxylethyl)-L 67.8 4 0.00014 45.7 4.8 33 48-81 5-37 (359)
478 1z82_A Glycerol-3-phosphate de 67.6 4.1 0.00014 45.2 4.8 34 47-81 14-47 (335)
479 1nyt_A Shikimate 5-dehydrogena 67.3 4.2 0.00014 43.6 4.6 32 49-81 121-152 (271)
480 3ghy_A Ketopantoate reductase 67.3 3.1 0.00011 46.2 3.7 31 659-690 5-35 (335)
481 3qha_A Putative oxidoreductase 67.2 4.3 0.00015 44.2 4.7 34 657-691 15-48 (296)
482 3k96_A Glycerol-3-phosphate de 67.2 4.6 0.00016 45.2 5.0 33 48-81 30-62 (356)
483 3vtf_A UDP-glucose 6-dehydroge 67.1 4.4 0.00015 46.5 4.9 33 48-81 22-54 (444)
484 1mv8_A GMD, GDP-mannose 6-dehy 67.0 3.8 0.00013 47.4 4.4 32 49-81 2-33 (436)
485 1txg_A Glycerol-3-phosphate de 66.9 3.3 0.00011 45.9 3.8 29 50-79 3-31 (335)
486 3dfz_A SIRC, precorrin-2 dehyd 66.9 3.7 0.00013 42.4 3.8 33 657-690 31-63 (223)
487 1jay_A Coenzyme F420H2:NADP+ o 66.8 4.5 0.00015 41.4 4.5 31 50-81 3-34 (212)
488 4dio_A NAD(P) transhydrogenase 66.6 4.6 0.00016 45.7 4.8 34 47-81 190-223 (405)
489 3l9w_A Glutathione-regulated p 66.4 3.6 0.00012 47.1 4.0 32 49-81 6-37 (413)
490 1ks9_A KPA reductase;, 2-dehyd 66.3 3.9 0.00013 44.2 4.1 31 660-691 3-33 (291)
491 2v6b_A L-LDH, L-lactate dehydr 66.3 4.4 0.00015 44.3 4.6 32 49-81 2-35 (304)
492 3g79_A NDP-N-acetyl-D-galactos 65.7 4.6 0.00016 47.0 4.7 35 48-82 19-54 (478)
493 1kyq_A Met8P, siroheme biosynt 65.6 2.9 0.0001 44.7 2.8 32 658-690 14-45 (274)
494 1evy_A Glycerol-3-phosphate de 65.2 3.8 0.00013 46.1 3.9 32 49-81 17-48 (366)
495 2raf_A Putative dinucleotide-b 64.9 4.6 0.00016 41.4 4.1 32 659-691 21-52 (209)
496 2hjr_A Malate dehydrogenase; m 64.8 4.9 0.00017 44.5 4.6 32 49-81 16-48 (328)
497 2a9f_A Putative malic enzyme ( 64.7 3.8 0.00013 45.8 3.6 35 46-81 187-222 (398)
498 3h8v_A Ubiquitin-like modifier 64.5 4.4 0.00015 43.8 3.9 35 46-81 35-70 (292)
499 3ond_A Adenosylhomocysteinase; 64.5 4.9 0.00017 46.5 4.6 32 49-81 267-298 (488)
500 1pzg_A LDH, lactate dehydrogen 64.3 4.1 0.00014 45.1 3.9 33 48-81 10-43 (331)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=6.3e-80 Score=747.09 Aligned_cols=486 Identities=30% Similarity=0.484 Sum_probs=412.6
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC--CCCccccccccccc-CCCCccCccccCccccccCCCCCeee
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE--SLLTDVPLFVSYMV-DTDFNWGYKTEKDERFCRGMSDQTCN 733 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~ 733 (1183)
+|||||||+|+||+++|.+|+|+++++|||||||+.. .....+|....... ++.++|.|.+.+|.. +.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 6999999999999999999999779999999999865 33456676655554 478999999999987 8999999
Q ss_pred ccccceecCcccccceeEeeCCccccchhhcc-CCCCCCccchHHHHHHhhcccCCCC-------CCCCCCCCCCccccc
Q psy8892 734 WPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWSYRDVLPYFKKSEDISVSRL-------KGSPYHGIGGYLKVE 805 (1183)
Q Consensus 734 ~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~gw~~~~l~py~~k~e~~~~~~~-------~~~~~~~~~G~~~~~ 805 (1183)
|++||++||+|++|+|+|.|+.+.|||.|+++ |+++|+|++++|||+|+|++..+.. .+...|+..||+.++
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 9999999999999999999876522 134689999999999
Q ss_pred cCCCCChHHHHHHHHHHHC--CCCCC-CC-CCCCceeeeecccccCCccchHHHhhhhhhhcCCCcEEEcCcEEEEEEEc
Q psy8892 806 QTSWRTPLSAAFLEAGSEL--GYDQV-DH-CENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILID 881 (1183)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~--G~~~~-d~-~~~~~g~~~~~~~~~~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~~I~~~ 881 (1183)
.+.+..+....|+++++++ |++.. |+ .+...|+++++..+.+|.|+++..+||.++.+++|++|++++.|+||+++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 9988889999999999999 99875 66 67788999999888899999999999999989999999999999999998
Q ss_pred ---CCCCeEEEEEEeeC-C-eEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCC-CCcccccccccc
Q psy8892 882 ---PITKRTYGVEFSKN-R-KSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDHLSMA 955 (1183)
Q Consensus 882 ---~~~gra~GV~~~~~-~-~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlp-VG~nl~dh~~~~ 955 (1183)
++++||+||++... + +.++|+|+||||||||+|+||||||+|||||+++|+++||+|++||| ||+|||||+.+
T Consensus 238 ~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~- 316 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL- 316 (566)
T ss_dssp EEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE-
T ss_pred cCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc-
Confidence 22268999999864 5 77899999999999999999999999999999999999999999999 99999999986
Q ss_pred eEEEEEcCcccccc---cccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCC-----------CCCCCCeeEeecCC
Q psy8892 956 GLVFLVNSSVTIVE---SKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAE-----------DPNHPDMEIVFGPG 1021 (1183)
Q Consensus 956 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-----------~~~~pd~~~~~~~~ 1021 (1183)
.+.|..+...+... ..........+|+.+++||++. ...+..+|++++... ....||+++++.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~ 395 (566)
T 3fim_B 317 PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTA-LIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQ 395 (566)
T ss_dssp CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGC-CSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESS
T ss_pred eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCccc-ChhhheeeeccccchhhhhhhccccccCCCCCEEEEeccc
Confidence 77787765432210 1111124568999999999994 567788999875311 11268888776543
Q ss_pred cccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCeeecCCCCChhhH
Q psy8892 1022 ALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDL 1101 (1183)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I~~~yls~~~D~ 1101 (1183)
.... .+......+++++.+++++|+||| +|+|+|+||++.|+||||||++|.|+
T Consensus 396 ~~~~-------------------~~~~~~~~~~~~~~~~l~~P~SrG-------~V~L~s~dp~~~P~i~~~yl~~~~D~ 449 (566)
T 3fim_B 396 WFHP-------------------AIPRPDTGSFMSVTNALISPVARG-------DIKLATSNPFDKPLINPQYLSTEFDI 449 (566)
T ss_dssp CCCT-------------------TSCCCSSCCEEEEEEEESSCSCCB-------EEECSSSCTTSCCEEECCTTCSHHHH
T ss_pred chhh-------------------cccCCCCCCEEEEEEeecCCccce-------EEEecCCCCCCCceeccccCCCccHH
Confidence 2111 001112346889999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEcCC
Q psy8892 1102 DVLIEAIKMAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIMLSS 1179 (1183)
Q Consensus 1102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd~~ 1179 (1183)
+.|++++|++++++++++|+++...+. .|++ ...+|||+|+||||+.+.|.||++|||+||+++++..|||+.
T Consensus 450 ~~~~~~~~~~~~i~~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~ 522 (566)
T 3fim_B 450 FTMIQAVKSNLRFLSGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPD 522 (566)
T ss_dssp HHHHHHHHHHHHHHTSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTT
T ss_pred HHHHHHHHHHHHHHhCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCC
Confidence 999999999999999999999876543 4552 246899999999999999999999999999988776888875
No 2
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=6.5e-75 Score=704.79 Aligned_cols=482 Identities=24% Similarity=0.400 Sum_probs=395.0
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC---CCCcccccccccccCCCCccCccccCccccccCCCCCe
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSYMVDTDFNWGYKTEKDERFCRGMSDQT 731 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~---~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 731 (1183)
..+|||||||||.|||++|.+|+|+++++|||||||+.. .....+|+.+....++.++|.|.+. +.++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r~ 75 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRRD 75 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEET
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCcc
Confidence 357999999999999999999999644899999999863 2335667777777888999999987 23444
Q ss_pred ee------ccccceecCcccccceeEeeCCccccchhhccCCCCCCccchHHHHHHhhcccCCCCC---CCCCCCCCCcc
Q psy8892 732 CN------WPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVLPYFKKSEDISVSRLK---GSPYHGIGGYL 802 (1183)
Q Consensus 732 ~~------~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~gw~~~~l~py~~k~e~~~~~~~~---~~~~~~~~G~~ 802 (1183)
+. |++||++||+|++|+|+|.|+.+.|||.|+++|+++|+|++++|||+|+|.+..+... +..+|+..||+
T Consensus 76 ~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl 155 (577)
T 3q9t_A 76 DYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPI 155 (577)
T ss_dssp TEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSE
T ss_pred ccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCE
Confidence 44 9999999999999999999999999999999999999999999999999998764311 23468899999
Q ss_pred ccccCCCCC---hHHHHHHHHHHHCCCCCC-CC-CCCCceeeeecccccCCccchHHHhhhhhhhcCCCcEEEcCcEEEE
Q psy8892 803 KVEQTSWRT---PLSAAFLEAGSELGYDQV-DH-CENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTK 877 (1183)
Q Consensus 803 ~~~~~~~~~---~~~~~~~~~~~~~G~~~~-d~-~~~~~g~~~~~~~~~~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~~ 877 (1183)
.+..+.+.. +..+.++++++++|++.. |+ .+...|+...+..+.+|.|.++. .| +.+++|++|++++.|+|
T Consensus 156 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~r 231 (577)
T 3q9t_A 156 PISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LF---VKNKPNITIVPEVHSKR 231 (577)
T ss_dssp EEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GG---SSSCTTEEEECSEEEEE
T ss_pred EeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HH---HhcCCCeEEEcCcEEEE
Confidence 998876543 477888899999999875 66 77788998888888889888764 34 35689999999999999
Q ss_pred EEEcCCCCeEEEEEEeeC-CeEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCC-CCcccccccccc
Q psy8892 878 ILIDPITKRTYGVEFSKN-RKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDHLSMA 955 (1183)
Q Consensus 878 I~~~~~~gra~GV~~~~~-~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlp-VG~nl~dh~~~~ 955 (1183)
|++++++++|+||++... ++.++|+|+||||||||+|+||+|||+|||||+++|+++||+|++||| ||+|||||+.+
T Consensus 232 i~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~- 310 (577)
T 3q9t_A 232 LIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGV- 310 (577)
T ss_dssp EEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEE-
T ss_pred EEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcce-
Confidence 999843389999999875 788899999999999999999999999999999999999999999999 99999999986
Q ss_pred eEEEEEcCccccccc----ccCChHHHHHHHhcCCCCCCCccccceEEEeecCCC--------------------CCCCC
Q psy8892 956 GLVFLVNSSVTIVES----KYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYA--------------------EDPNH 1011 (1183)
Q Consensus 956 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 1011 (1183)
.+.|+++........ .........+|..+++||++ .+..+..+|.+++.. ....+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (577)
T 3q9t_A 311 PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVG-SGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQ 389 (577)
T ss_dssp EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGG-CCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTSC
T ss_pred eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcc-cchhheeEEeecChhhhcchhhhhhhhccccccccCCCCC
Confidence 788888765422111 11123567899999999998 466677888765310 01126
Q ss_pred CCeeEeecCCcccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCeee
Q psy8892 1012 PDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFY 1091 (1183)
Q Consensus 1012 pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I~ 1091 (1183)
|++++++.+..... +.. .+......+++++.+++++|+||| |+|+|+|+||++.|.||
T Consensus 390 p~~~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~~~l~~P~SrG------G~V~L~S~dp~~~P~i~ 447 (577)
T 3q9t_A 390 PHFELDFVCMFGTA---------FQW-------HFPTPKTGDHLTVVVDLVRPISDP------GEVTLNSADPFQQPNIN 447 (577)
T ss_dssp CSEEEEEESSCCGG---------GCS-------SSCCCSSSEEEEEEEEESSCCSCC------EEEECSCSCTTSCCEEE
T ss_pred ceEEEEeccccccc---------ccc-------cccCCCCCCEEEEEEEeeeccccC------CEEEeCCCCCCCCceEe
Confidence 88888776542110 000 000112346789999999999999 89999999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHH-cChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCC
Q psy8892 1092 PNYLSDSRDLDVLIEAIKMAVELS-ETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVD 1170 (1183)
Q Consensus 1092 ~~yls~~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~ 1170 (1183)
||||++|.|++.|++++|++++++ ++++|+++...+. .|+. ..+|||+|+||||+...|.||++|||+||+++
T Consensus 448 p~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~---~p~~---~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~ 521 (577)
T 3q9t_A 448 LNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEY---PWEM---PLDSDKEMHRAVLDRCQTAFHPTGTARLSKNI 521 (577)
T ss_dssp CCTTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEE---SSCC---CTTCHHHHHHHHHHHCEECSCCBCTTCBCSST
T ss_pred cCcCCCccHHHHHHHHHHHHHHHHHhChhhhhcccccc---CCCC---CcCCHHHHHHHHHhccccccccccceecCCCC
Confidence 999999999999999999999999 9999999876543 4553 46899999999999999999999999999877
Q ss_pred CCcEEEcCC
Q psy8892 1171 RRGEIMLSS 1179 (1183)
Q Consensus 1171 ~~~~Vvd~~ 1179 (1183)
+ +.|||+.
T Consensus 522 ~-~~VVD~~ 529 (577)
T 3q9t_A 522 D-QGVVDPK 529 (577)
T ss_dssp T-TCSBCTT
T ss_pred C-CceECCC
Confidence 6 6788875
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.9e-75 Score=706.59 Aligned_cols=491 Identities=23% Similarity=0.324 Sum_probs=379.7
Q ss_pred cccccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC-CC--CCcccccccccccCCCCccCccccCccccccCC
Q psy8892 651 TKIFEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE-ES--LLTDVPLFVSYMVDTDFNWGYKTEKDERFCRGM 727 (1183)
Q Consensus 651 p~~~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~-~~--~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~ 727 (1183)
..+.+.+|||||||||.|||++|.+|+|+++.+|||||||+. .. .....|..+....++.++|.|.+.++. +
T Consensus 13 ~~~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~ 87 (583)
T 3qvp_A 13 KDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----T 87 (583)
T ss_dssp GGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----T
T ss_pred hhcCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----C
Confidence 334456899999999999999999999977999999999983 21 223445555566678899999999885 4
Q ss_pred CCCeeeccccceecCcccccceeEeeCCccccchhhccCCC-CCCccchHHHHHHhhcccCCCC--------CCCCCCCC
Q psy8892 728 SDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNP-GWSYRDVLPYFKKSEDISVSRL--------KGSPYHGI 798 (1183)
Q Consensus 728 ~~~~~~~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~-gw~~~~l~py~~k~e~~~~~~~--------~~~~~~~~ 798 (1183)
.++.+.|++||++||+|++|+|+|.|+.+.|||.|+++|+. +|+|++++|||+|+|++..+.. .+..+|+.
T Consensus 88 ~~r~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~ 167 (583)
T 3qvp_A 88 NNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGV 167 (583)
T ss_dssp TSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCS
T ss_pred CCCeeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCC
Confidence 78889999999999999999999999999999999999888 9999999999999999875421 24568999
Q ss_pred CCccccccC---CCCChHHHHHHHHHHHCCCCCC-CC-CCCCceeeeeccccc-CCccchHHHhhhhhhhcCCCcEEEcC
Q psy8892 799 GGYLKVEQT---SWRTPLSAAFLEAGSELGYDQV-DH-CENPIGFSYVLANKI-RGARQSASKAFIRPIRKRHNLKVAKE 872 (1183)
Q Consensus 799 ~G~~~~~~~---~~~~~~~~~~~~~~~~~G~~~~-d~-~~~~~g~~~~~~~~~-~g~r~~~~~~~L~~~~~~~g~~i~~~ 872 (1183)
.||+.+..+ ....++.+.|+++++++|++.. |+ .+...|+.+++..+. +|.|+++..+||.++.+++|++|+++
T Consensus 168 ~Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~ 247 (583)
T 3qvp_A 168 NGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTG 247 (583)
T ss_dssp SSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECS
T ss_pred CCCEEecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcC
Confidence 999998876 3446888999999999999975 66 777889888887765 68999999999999999999999999
Q ss_pred cEEEEEEEcCC--CCeEEEEEEe-eCCeEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCCCCcccc
Q psy8892 873 ARVTKILIDPI--TKRTYGVEFS-KNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLKVGYNMQ 949 (1183)
Q Consensus 873 t~V~~I~~~~~--~gra~GV~~~-~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlpVG~nl~ 949 (1183)
+.|+||+++++ ++||+||++. .+++.++|+|+||||||||+|+||||||+|||||+++|+++||+|++|||||+|||
T Consensus 248 a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLq 327 (583)
T 3qvp_A 248 QYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQ 327 (583)
T ss_dssp CEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBB
T ss_pred CEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchh
Confidence 99999999831 3799999998 57888999999999999999999999999999999999999999999999999999
Q ss_pred cccccceEEEEEcCcccccc-----c---cc-C-ChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCCCCeeEeec
Q psy8892 950 DHLSMAGLVFLVNSSVTIVE-----S---KY-T-KPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVFG 1019 (1183)
Q Consensus 950 dh~~~~~~~~~~~~~~~~~~-----~---~~-~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~ 1019 (1183)
||+.+ .+.|+.+....... . .+ . ......+|+....++++. ...+...|.++ ++++.++.
T Consensus 328 DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~ 397 (583)
T 3qvp_A 328 DQTTA-TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAE-EAVARGGFHNT--------TALLIQYE 397 (583)
T ss_dssp CCEEE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHH-HHHHTTSCSCH--------HHHHHHHH
T ss_pred hCccc-eEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhc-ccccccCcccc--------HHHHhhhc
Confidence 99986 78888764311000 0 00 0 011223344333332220 00000011110 11111110
Q ss_pred CCcccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCee-ecCCCCCh
Q psy8892 1020 PGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKF-YPNYLSDS 1098 (1183)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I-~~~yls~~ 1098 (1183)
... +. .+.... ... +++... ...+++.+++++|+||| +|+|+|+||++.|+| ++|||++|
T Consensus 398 ~~~---~~--~~~~~~----~~~-~~~~~~--~~~~~~~~~~~~P~SrG-------~v~l~s~dp~~~P~i~~~~yl~~~ 458 (583)
T 3qvp_A 398 NYR---DW--IVNHNV----AYS-ELFLDT--AGVASFDVWDLLPFTRG-------YVHILDKDPYLHHFAYDPQYFLNE 458 (583)
T ss_dssp HHH---HH--HHHSCC----EEE-EEEEEC--TTSEEEEEEESSCCCCB-------EEEESSSCGGGCCEEEECCTTCSH
T ss_pred cch---hh--hccCCC----Ccc-eeeecc--CCCceeeeeecccCCce-------EEEecCCCCCCCcccccCCCCCCH
Confidence 000 00 000000 000 000000 12345566679999999 999999999999999 99999999
Q ss_pred hhHHHHHHHHHHHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEcC
Q psy8892 1099 RDLDVLIEAIKMAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIMLS 1178 (1183)
Q Consensus 1099 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd~ 1178 (1183)
.|++.|++++|++++|+++++|+++...+ ..|+|.....+|||+|+||+|+.+.|.||++|||+||++++ +.|||+
T Consensus 459 ~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~ 534 (583)
T 3qvp_A 459 LDLLGQAAATQLARNISNSGAMQTYFAGE---TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDN 534 (583)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCT
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhccccc---cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECC
Confidence 99999999999999999999999987543 46887655568999999999999999999999999998766 567776
Q ss_pred C
Q psy8892 1179 S 1179 (1183)
Q Consensus 1179 ~ 1179 (1183)
.
T Consensus 535 ~ 535 (583)
T 3qvp_A 535 A 535 (583)
T ss_dssp T
T ss_pred C
Confidence 4
No 4
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.6e-72 Score=680.49 Aligned_cols=498 Identities=31% Similarity=0.470 Sum_probs=405.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC--CCCccccccccccc-CCCCCCCcccccCCCcccCCCCCeec
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE--IILDEIPLFVSHIV-SSDFNWGYTTEKTDGICKGMKNQRCN 123 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~--~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1183)
+|||||||+|++||++|.+|+++++.+|||||+|+.. .....+|....... +..++|.|.+.++.. ++++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 5999999999999999999999669999999999864 23445666655555 377999999999876 6899999
Q ss_pred cCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHHc-CCCCCCccchHHHH
Q psy8892 124 WPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYF 202 (1183)
Q Consensus 124 ~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~~-~~~~w~~~~l~~~~ 202 (1183)
|++|+++||+|++|+|+|. |+.+.||+.|+++ ++.+|+|+++.|||
T Consensus 78 ~~rGk~lGGsS~iN~m~~~---------------------------------Rg~~~d~d~W~~~~G~~gWs~~~~~pyf 124 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMM---------------------------------RGSTEDFDRYAAVTGDEGWNWDNIQQFV 124 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCC---------------------------------CCCHHHHHHHHHHHTCTTSSHHHHHHHH
T ss_pred ccCCcEEcCcccccceEEe---------------------------------cCCHHHHHHHHhcCCCCCcCHHHHHHHH
Confidence 9999999999999999999 9999999999997 99999999999999
Q ss_pred HHhccCCCCCC-------CCCCCCCCCcceeecCCCCCchHHHHHHHHHHHc--CCC-CCCCCCCCCcceeeeecccCCC
Q psy8892 203 KKSEDMKTAEL-------KSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEM--GYD-IVDPSEPNAIGFSYVLANTGNG 272 (1183)
Q Consensus 203 ~~~e~~~~~~~-------~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~--G~~-~~~~~~~~~~g~~~~~~~~~~g 272 (1183)
++.|.+..... .+..+|+.+|++.++.+....+....+.++++++ |++ ..++|.....|++.++.++..|
T Consensus 125 ~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g 204 (566)
T 3fim_B 125 RKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNG 204 (566)
T ss_dssp HHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETT
T ss_pred HHHhccCCccccccccccCCccccCCCCCeeeecCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCC
Confidence 99999864421 1235788999999999988889999999999999 998 6777878888998888888899
Q ss_pred cccchhhhhhhcccCCCCeEEEcCceEEEEEee---CCCCcceEEEEEEEeC-C-eEEEEEeCcEEEEcCCCCCChHHHH
Q psy8892 273 ERYSASRAFLRPIRKRPNLKVAKRARVTKVLID---ENDNLKRATGVEFFKN-K-QRHTVRARKEVILSAGALNSPQLLM 347 (1183)
Q Consensus 273 ~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~---~~~~~~rv~GV~~~~~-g-~~~~i~A~k~VILAAGai~sp~LLl 347 (1183)
.|+++..+||.++.+++|++|++++.|+||+++ ++. .+|+||++.+. + +.++++|+||||||||+|+||+|||
T Consensus 205 ~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~--~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~ 282 (566)
T 3fim_B 205 QRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGL--PAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQ 282 (566)
T ss_dssp EECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTE--EECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHH
T ss_pred EEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCC--CEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHH
Confidence 999999999999989999999999999999998 221 18999999874 4 7788999999999999999999999
Q ss_pred HhCCCChhhhhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccc
Q psy8892 348 LSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQ 426 (1183)
Q Consensus 348 ~SGig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1183)
+|||||+++|+++||++++|+| ||+|||||+.+.+ .|..+.+......+ .
T Consensus 283 lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~~-~~~~~~~~~~~~~~----------------------------~ 333 (566)
T 3fim_B 283 LSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLPA-AFFVNSNQTFDNIF----------------------------R 333 (566)
T ss_dssp HTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEECC-EEEESCSCSSGGGG----------------------------T
T ss_pred hcCCCChHHHhhcCCCceecCcchhhhhhcCccceE-EEEeCCCcccchhh----------------------------c
Confidence 9999999999999999999999 9999999987665 66665432110000 0
Q ss_pred cccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCC-----------CCCCCCcEeEee
Q psy8892 427 DHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFE-----------NDKTRPDIELVF 495 (1183)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 495 (1183)
+... ......+|...++||++... .+..+|.+.... .....|++++++
T Consensus 334 ~~~~--------------------~~~~~~~~~~~~~G~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~ 392 (566)
T 3fim_B 334 DSSE--------------------FNVDLDQWTNTRTGPLTALI-ANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIF 392 (566)
T ss_dssp CHHH--------------------HHHHHHHHHHHSCSGGGCCS-CSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEE
T ss_pred ChHH--------------------HHHHHHHHHhcCCCCcccCh-hhheeeeccccchhhhhhhccccccCCCCCEEEEe
Confidence 0000 01124788999999998754 567888875421 124568888776
Q ss_pred cCCccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCeeeCCCCCChhhHHHHH
Q psy8892 496 GPGALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLI 575 (1183)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i~~~y~~~~~D~~~~~ 575 (1183)
.+..... .+.......++++.+.+++|+|||+|+|+|+||++.|.|++||+++|.|++.|+
T Consensus 393 ~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~ 453 (566)
T 3fim_B 393 SNQWFHP-------------------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMI 453 (566)
T ss_dssp ESSCCCT-------------------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHH
T ss_pred cccchhh-------------------cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHH
Confidence 5432211 001112336788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccc--cccccCCC-C---ccchHHHHHHhccc-------cc-cc----c-cccCCcceeeecccccc
Q psy8892 576 EAIKMCALFSLVCHLL--VLSVAHAQ-S---QLFRTECALFSLVC-------HL-LL----L-SVAHAQSQLFRTFINMV 636 (1183)
Q Consensus 576 ~~~~~~~~~~~~~~~~--~~~~~~~g-~---~~~~~~~~~~~~~~-------t~-~g----~-~VVD~~~rV~~gv~nLr 636 (1183)
+++|++++++.+..+. ...+..|+ . ....|++|+++... || || + +|||++|||| |++|||
T Consensus 454 ~~~~~~~~i~~~~~~~~~~~~~~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~-Gv~~Lr 532 (566)
T 3fim_B 454 QAVKSNLRFLSGQAWADFVIRPFDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVK-GVDGLR 532 (566)
T ss_dssp HHHHHHHHHHTSGGGTTTEEEESSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBT-TCBSEE
T ss_pred HHHHHHHHHHhCcccCCccccccCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEc-cCCCcE
Confidence 9999999998765432 22333444 2 23459999997654 33 66 3 9999999999 999999
Q ss_pred ccccccccccccccccc
Q psy8892 637 SKDAILTPSNIVQDTKI 653 (1183)
Q Consensus 637 V~D~s~~p~~~~~np~~ 653 (1183)
|||+||||++++.||+.
T Consensus 533 VvDaSv~P~~~~~n~~~ 549 (566)
T 3fim_B 533 IVDGSILPFAPNAHTQG 549 (566)
T ss_dssp ECSGGGCCSCCSSCTHH
T ss_pred EcccccCCCCCCcCcHH
Confidence 99999999999999987
No 5
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=1.7e-68 Score=647.27 Aligned_cols=496 Identities=23% Similarity=0.313 Sum_probs=368.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC-CC--CCcccccccccccCCCCCCCcccccCCCcccCCCCCe
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE-EI--ILDEIPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQR 121 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~-~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1183)
.++|||||||+|.+||++|.+|+|+++.+|||||+|+. .. .....|..+...+...++|.|.+.++. .+++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~ 91 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQT 91 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCe
Confidence 35799999999999999999999987899999999983 21 223445555556677899999999875 37888
Q ss_pred eccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHHcCCC-CCCccchHH
Q psy8892 122 CNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNI-GWSFEEVLP 200 (1183)
Q Consensus 122 ~~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~~~~~-~w~~~~l~~ 200 (1183)
+.|++|+++||+|++|+|+|. |+.+.||+.|+++++. +|+|+++.|
T Consensus 92 ~~~~rGk~LGGsS~iN~m~y~---------------------------------Rg~~~Dyd~W~~~g~~~gW~~~~~lp 138 (583)
T 3qvp_A 92 ALIRSGNGLGGSTLVNGGTWT---------------------------------RPHKAQVDSWETVFGNEGWNWDNVAA 138 (583)
T ss_dssp CEECCBCSTTGGGGTSCCBCC---------------------------------CCCHHHHHHHHHTSCCTTCSHHHHHH
T ss_pred eeccCceecCCcCcccceEEE---------------------------------eCCHHHHHHHHHhCCCCCCChhHHHH
Confidence 999999999999999999999 9999999999999888 999999999
Q ss_pred HHHHhccCCCCC--------CCCCCCCCCCcceeecCC---CCCchHHHHHHHHHHHcCCC-CCCCCCCCCcceeeeecc
Q psy8892 201 YFKKSEDMKTAE--------LKSSPYHGVGGYLKIERP---LWRTPLAKCVLDAGHEMGYD-IVDPSEPNAIGFSYVLAN 268 (1183)
Q Consensus 201 ~~~~~e~~~~~~--------~~~~~~~~~~g~l~~~~~---~~~~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~ 268 (1183)
||++.|.+..+. .....+|+.+|++.+... ....+..+.+.++++++|++ ..+++.....|+..++.+
T Consensus 139 yf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t 218 (583)
T 3qvp_A 139 YSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNT 218 (583)
T ss_dssp HHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBS
T ss_pred HHHHHHhccCCcchhhcccccCCccccCCCCCEEecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceeccccee
Confidence 999999985432 123567899999998876 33468889999999999999 678888888888887776
Q ss_pred c-CCCcccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEE-eCCeEEEEEeCcEEEEcCCCCCChHHH
Q psy8892 269 T-GNGERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFF-KNKQRHTVRARKEVILSAGALNSPQLL 346 (1183)
Q Consensus 269 ~-~~g~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~-~~g~~~~i~A~k~VILAAGai~sp~LL 346 (1183)
. ..|.|+++..+||.++.+++|++|++++.|+||++++.+.+.+|+||++. .+++.++++|+||||||||+|+||+||
T Consensus 219 ~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 219 LHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp BCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred EcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 5 46899999999999998999999999999999999842111299999998 577888999999999999999999999
Q ss_pred HHhCCCChhhhhhcCCCceecCccccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccc
Q psy8892 347 MLSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQ 426 (1183)
Q Consensus 347 l~SGig~~~~l~~~gi~~~~~~pVG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1183)
|+|||||+++|+++||++++|+|||+|||||+.+.+ .|..+.+.. ++.... .+
T Consensus 299 ~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH~~~~~-~~~~~~~~~----------~~~~~~-------------~~--- 351 (583)
T 3qvp_A 299 EYSGIGMKSILEPLGIDTVVDLPVGLNLQDQTTATV-RSRITSAGA----------GQGQAA-------------WF--- 351 (583)
T ss_dssp HHTTBSCHHHHGGGTCCCSBCCCTTCCBBCCEEEEE-EEEECGGGC----------SBCEEE-------------EE---
T ss_pred HHcCCCCHHHHHhCCCCceeeCccccchhhCccceE-EEEecCCcc----------cccccc-------------cc---
Confidence 999999999999999999999999999999986554 676654210 000000 00
Q ss_pred cccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEecc-----CC------CCCCCCcEeEee
Q psy8892 427 DHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSK-----FE------NDKTRPDIELVF 495 (1183)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~ 495 (1183)
.++... +.... .....+.....+++... ..+...|.... +. .....|..++.+
T Consensus 352 --~~~~~~---~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (583)
T 3qvp_A 352 --ATFNET---FGDYS----------EKAHELLNTKLEQWAEE-AVARGGFHNTTALLIQYENYRDWIVNHNVAYSELFL 415 (583)
T ss_dssp --EEHHHH---HGGGH----------HHHHHHHHHCHHHHHHH-HHHTTSCSCHHHHHHHHHHHHHHHHHSCCEEEEEEE
T ss_pred --ccHHHh---hccch----------HHHHHHHHhhcchhhcc-cccccCccccHHHHhhhccchhhhccCCCCcceeee
Confidence 000000 00000 00011111111110000 00000000000 00 000111222111
Q ss_pred cCCccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCee-eCCCCCChhhHHHH
Q psy8892 496 GPGALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKF-YPNYLSDSRDLDVL 574 (1183)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i-~~~y~~~~~D~~~~ 574 (1183)
. . ...+.+.++.++|.|||+|+|+|+||++.|.| ++||+++|.|++.|
T Consensus 416 ~-----------------------------~--~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~ 464 (583)
T 3qvp_A 416 D-----------------------------T--AGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQ 464 (583)
T ss_dssp E-----------------------------C--TTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHH
T ss_pred c-----------------------------c--CCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHH
Confidence 0 0 01234455568999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhccccc--cccccCCCC------ccchHHHHHHhcc-------ccc-cc----ccccCCcceeeecccc
Q psy8892 575 IEAIKMCALFSLVCHLL--VLSVAHAQS------QLFRTECALFSLV-------CHL-LL----LSVAHAQSQLFRTFIN 634 (1183)
Q Consensus 575 ~~~~~~~~~~~~~~~~~--~~~~~~~g~------~~~~~~~~~~~~~-------~t~-~g----~~VVD~~~rV~~gv~n 634 (1183)
++++|++++++++..+. ...+..||. ....|++|+++.. +|| || +||||++|||| |++|
T Consensus 465 ~~~~~~~~~i~~~~~~~~~~~~~~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~-Gv~~ 543 (583)
T 3qvp_A 465 AAATQLARNISNSGAMQTYFAGETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVY-GVQG 543 (583)
T ss_dssp HHHHHHHHHHHTSTTHHHHEEEEEESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBT-TCBS
T ss_pred HHHHHHHHHHHhCcchhhccccccCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEe-cCCC
Confidence 99999999998665432 122333442 3345999998754 344 66 69999999999 9999
Q ss_pred ccccccccccccccccccc
Q psy8892 635 MVSKDAILTPSNIVQDTKI 653 (1183)
Q Consensus 635 LrV~D~s~~p~~~~~np~~ 653 (1183)
|||||+||||++++.||+.
T Consensus 544 LrVvDaSv~P~~~~~n~~~ 562 (583)
T 3qvp_A 544 LRVIDGSIPPTQMSSHVMT 562 (583)
T ss_dssp EEECSTTCCSSCCSSCSHH
T ss_pred eEEeecccCCCCCCcCcHH
Confidence 9999999999999999987
No 6
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=7.4e-68 Score=642.93 Aligned_cols=496 Identities=26% Similarity=0.379 Sum_probs=386.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC---CCCcccccccccccCCCCCCCcccccCCCcccCCCCCe
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE---IILDEIPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQR 121 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1183)
.++|||||||||.+||++|.+|+|+++.+|||||+|+.. .....+|.......++.++|.|.+. +.++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r~ 75 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRRD 75 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEET
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCcc
Confidence 357999999999999999999999944899999999862 1234567766667788899999886 23444
Q ss_pred ec------cCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHHcCCCCCCc
Q psy8892 122 CN------WPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSF 195 (1183)
Q Consensus 122 ~~------~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~~~~~~w~~ 195 (1183)
+. |++||++||+|++|+|+|. |+.+.||+.|+++++.+|+|
T Consensus 76 ~~~~~~~~~~rGkvLGGsS~iN~m~~~---------------------------------rg~~~dyd~W~~~G~~gW~~ 122 (577)
T 3q9t_A 76 DYERIEKPNTRGKTLGGSSSLNYFTWV---------------------------------PGHKATFDQWEEFGGKEWTW 122 (577)
T ss_dssp TEEEEEEEECCBCSTTGGGGTSCCEEC---------------------------------CCCHHHHHTTHHHHCGGGSH
T ss_pred ccccccccccccccccCccccCceEec---------------------------------cCCHHHHHHHHHhCCCCCCH
Confidence 44 9999999999999999999 99999999999999999999
Q ss_pred cchHHHHHHhccCCCCCC---CCCCCCCCCcceeecCCCCCc---hHHHHHHHHHHHcCCC-CCCCCCCCCcceeeeecc
Q psy8892 196 EEVLPYFKKSEDMKTAEL---KSSPYHGVGGYLKIERPLWRT---PLAKCVLDAGHEMGYD-IVDPSEPNAIGFSYVLAN 268 (1183)
Q Consensus 196 ~~l~~~~~~~e~~~~~~~---~~~~~~~~~g~l~~~~~~~~~---~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~ 268 (1183)
+++.|||++.|.+..... ....+|+.+|++.+....... +..+.+.++++++|++ ..+++.....|+......
T Consensus 123 ~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~ 202 (577)
T 3q9t_A 123 DPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDT 202 (577)
T ss_dssp HHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEES
T ss_pred HHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecce
Confidence 999999999998764321 112367889999988876543 4677788889999998 667787888888888777
Q ss_pred cCCCcccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeC-CeEEEEEeCcEEEEcCCCCCChHHHH
Q psy8892 269 TGNGERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKN-KQRHTVRARKEVILSAGALNSPQLLM 347 (1183)
Q Consensus 269 ~~~g~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~-g~~~~i~A~k~VILAAGai~sp~LLl 347 (1183)
...|.|.++. .+ +.+++|++|++++.|+||++++.+. +|+||++.+. ++.++++|+|+||||||+|+||+|||
T Consensus 203 ~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~ri~~~~~~~--~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~ 276 (577)
T 3q9t_A 203 IYRGQRSGSF-LF---VKNKPNITIVPEVHSKRLIINEADR--TCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM 276 (577)
T ss_dssp EETTEECCGG-GG---SSSCTTEEEECSEEEEEEEEETTTT--EEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred ecCCeEeeHH-HH---HhcCCCeEEEcCcEEEEEEEeCCCC--EEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHH
Confidence 7778888654 33 3568899999999999999984222 9999999875 77889999999999999999999999
Q ss_pred HhCCCChhhhhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccc
Q psy8892 348 LSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQ 426 (1183)
Q Consensus 348 ~SGig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1183)
+|||||+++|+++||++++|+| ||+|||||+.+.+ .|.++.+......+ +.
T Consensus 277 ~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~~~-~~~~~~~~~~~~~~---------------------------~~ 328 (577)
T 3q9t_A 277 LSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVPF-VLRVKDGFGMDDVL---------------------------LR 328 (577)
T ss_dssp HTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEEEE-EEEECTTSSSHHHH---------------------------TS
T ss_pred HcCCCCHHHHHHcCCCeeccCchhhhhhhcCcceeE-EEEeCCCCccchhh---------------------------hc
Confidence 9999999999999999999999 9999999986654 67766532211110 00
Q ss_pred cccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccC--------------------CCCC
Q psy8892 427 DHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKF--------------------ENDK 486 (1183)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------------------~~~~ 486 (1183)
+... ......+|...++||++.. ..+..+|.+... ..+.
T Consensus 329 ~~~~--------------------~~~~~~~y~~~~~Gpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (577)
T 3q9t_A 329 HGPK--------------------RDAVVSAYNKNRSGPVGSG-LLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPL 387 (577)
T ss_dssp CSHH--------------------HHHHHHHHHHHSCSGGGCC-SEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTT
T ss_pred chhH--------------------HHHHHHHHHhcCCCCcccc-hhheeEEeecChhhhcchhhhhhhhccccccccCCC
Confidence 0000 0122468888999999863 456677765320 0124
Q ss_pred CCCcEeEeecCCccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCce-EEEeeCCCCCCCCeeeCCCC
Q psy8892 487 TRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRG-FVKLRSSNPFDSPKFYPNYL 565 (1183)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG-~v~l~s~d~~~~P~i~~~y~ 565 (1183)
..|++++++.+..... +...+.......++++.+.+++|+||| +|+|+|+||++.|.|++||+
T Consensus 388 ~~p~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl 451 (577)
T 3q9t_A 388 GQPHFELDFVCMFGTA----------------FQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFF 451 (577)
T ss_dssp SCCSEEEEEESSCCGG----------------GCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTT
T ss_pred CCceEEEEeccccccc----------------ccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcC
Confidence 5688887776531100 000001112235788999999999999 99999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhh-hccccc--cccccCCCCc---cchHHHHHHhcccc-------c-cc----ccccCCcce
Q psy8892 566 SDSRDLDVLIEAIKMCALFS-LVCHLL--VLSVAHAQSQ---LFRTECALFSLVCH-------L-LL----LSVAHAQSQ 627 (1183)
Q Consensus 566 ~~~~D~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~g~~---~~~~~~~~~~~~~t-------~-~g----~~VVD~~~r 627 (1183)
++|.|++.|++++|++++++ .+..+. ...+..|+.. ...|++|+++...| | || +||||++||
T Consensus 452 ~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lr 531 (577)
T 3q9t_A 452 ANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLK 531 (577)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCB
T ss_pred CCccHHHHHHHHHHHHHHHHHhChhhhhccccccCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCe
Confidence 99999999999999999998 554332 2233344433 34599999987543 3 66 689999999
Q ss_pred eeeccccccccccccccccccccccc
Q psy8892 628 LFRTFINMVSKDAILTPSNIVQDTKI 653 (1183)
Q Consensus 628 V~~gv~nLrV~D~s~~p~~~~~np~~ 653 (1183)
|| |++||||||+||||++++.||+.
T Consensus 532 V~-Gv~~LrVvDaSv~P~~~~~n~~a 556 (577)
T 3q9t_A 532 VH-GIKKLRVADASVIPIIPDCRIQN 556 (577)
T ss_dssp BT-TCBSEEECSGGGCSSCCSSCCHH
T ss_pred Ee-CCCCcEEeecccccCCCCCccHH
Confidence 99 99999999999999999999986
No 7
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=3.5e-67 Score=643.52 Aligned_cols=490 Identities=25% Similarity=0.345 Sum_probs=382.2
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC--CCcc-cccccccccCCCCccCccccCccccccCCCCCe
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES--LLTD-VPLFVSYMVDTDFNWGYKTEKDERFCRGMSDQT 731 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~--~~~~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 731 (1183)
..+||+||||+|.+|+++|.+|++++|++|+|||+|+... .... +|..+....++.++|.|.+.+ . +.++.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~----~~~~~ 95 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--L----INNRT 95 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--C----TTSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--C----CCCce
Confidence 3579999999999999999999996699999999998653 2223 565555555677899999887 2 67889
Q ss_pred eeccccceecCcccccceeEeeCCccccchhhcc-CCCCCCccchHHHHHHhhcccCCCC--------CCCCCCCCCCcc
Q psy8892 732 CNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWSYRDVLPYFKKSEDISVSRL--------KGSPYHGIGGYL 802 (1183)
Q Consensus 732 ~~~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~gw~~~~l~py~~k~e~~~~~~~--------~~~~~~~~~G~~ 802 (1183)
+.|++|+++||+|.+|+|+|.|+.+.||+.|++. |+++|+|++|+|||+|+|++..+.. .+..+|+..||+
T Consensus 96 ~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl 175 (587)
T 1gpe_A 96 NNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTV 175 (587)
T ss_dssp CEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSE
T ss_pred eeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCE
Confidence 9999999999999999999999999999999998 9999999999999999999876421 145678889999
Q ss_pred ccccC---CCCChHHHHHHHHHHHCCCCCC-CC-CCCCceeeeecccc-cCCccchHHHhhhhhhhcCCCcEEEcCcEEE
Q psy8892 803 KVEQT---SWRTPLSAAFLEAGSELGYDQV-DH-CENPIGFSYVLANK-IRGARQSASKAFIRPIRKRHNLKVAKEARVT 876 (1183)
Q Consensus 803 ~~~~~---~~~~~~~~~~~~~~~~~G~~~~-d~-~~~~~g~~~~~~~~-~~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~ 876 (1183)
.+.++ ....+..+.|.++++++|++.. |+ ++...|++.++..+ .+|.|+++..+||.++++++|++|++++.|+
T Consensus 176 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~ 255 (587)
T 1gpe_A 176 QSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVG 255 (587)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEE
T ss_pred EEccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 98855 3567888999999999999875 66 66677888877665 4789999999999888889999999999999
Q ss_pred EEEEcCCC--CeEEEEEEe-eCCeEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCCCCcccccccc
Q psy8892 877 KILIDPIT--KRTYGVEFS-KNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLKVGYNMQDHLS 953 (1183)
Q Consensus 877 ~I~~~~~~--gra~GV~~~-~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlpVG~nl~dh~~ 953 (1183)
+|++++++ ++|+||++. .+++.++|+|+|+||||||+|+||+||++|||||+++|+++||+|++|||||+|||||+.
T Consensus 256 ~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~~ 335 (587)
T 1gpe_A 256 KVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTT 335 (587)
T ss_dssp EEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCCEE
T ss_pred EEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcCcc
Confidence 99997532 489999998 678888999999999999999999999999999999999999999999999999999998
Q ss_pred cceEEEEEcCcccccccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCC--CC----CCCeeEeecCCcccCCC
Q psy8892 954 MAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAED--PN----HPDMEIVFGPGALTGDS 1027 (1183)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~----~pd~~~~~~~~~~~~~~ 1027 (1183)
+ .+.+.++.................+|...++|+++. ...+...|.+...... .. .|+++.++.+. ...+
T Consensus 336 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 411 (587)
T 1gpe_A 336 T-TVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDL-LNTKLDQWAEETVARGGFHNVTALKVQYENYRNWL-LDED- 411 (587)
T ss_dssp E-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHH-HHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHH-HHSC-
T ss_pred c-ceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccc-cccceeeEeecccccccccccccccccHHHHhhhc-cCCC-
Confidence 6 778887654321111111122456777666677652 2222333443210000 00 02221111000 0000
Q ss_pred CCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCC-eeecCCCCChhhHHHHHH
Q psy8892 1028 GGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSP-KFYPNYLSDSRDLDVLIE 1106 (1183)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P-~I~~~yls~~~D~~~~~~ 1106 (1183)
. ...+.++ ...+.+++.+++++|+||| +|+|+|+||++.| .|++||+++|.|++.|++
T Consensus 412 ---------~--~~~~~~~---~~~~~~~~~~~~~~P~srG-------~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~ 470 (587)
T 1gpe_A 412 ---------V--AFAELFM---DTEGKINFDLWDLIPFTRG-------SVHILSSDPYLWQFANDPKFFLNEFDLLGQAA 470 (587)
T ss_dssp ---------C--EEEEEEE---ECTTEEEEEEEESSCCCCB-------EEEESSSCGGGTCEEEECCTTSSHHHHHHHHH
T ss_pred ---------C--cceeeee---cCCCcEEEEEEecCCccce-------eEEeCCCCcccCccEeecccCCChHHHHHHHH
Confidence 0 0000001 1124678888999999999 9999999999999 999999999999999999
Q ss_pred HHHHHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEcCC
Q psy8892 1107 AIKMAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIMLSS 1179 (1183)
Q Consensus 1107 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd~~ 1179 (1183)
+++++++++++.+|+++...+ ..|++.....+||++|+||+|+...+.||++|||+||++++ ..|||+.
T Consensus 471 ~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~-~sVVD~~ 539 (587)
T 1gpe_A 471 ASKLARDLTSQGAMKEYFAGE---TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSREL-GGVVDAT 539 (587)
T ss_dssp HHHHHHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGG-TCSBCTT
T ss_pred HHHHHHHHHcCcchhhhcccc---cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCC-CceECCC
Confidence 999999999999999987543 35554323458999999999999999999999999997653 5677764
No 8
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=4.6e-64 Score=612.05 Aligned_cols=463 Identities=29% Similarity=0.475 Sum_probs=382.5
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC--CcccccccccccCCCCccCccccCccccccCCCCCeee
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL--LTDVPLFVSYMVDTDFNWGYKTEKDERFCRGMSDQTCN 733 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 733 (1183)
.+||+||||+|++|+++|.+|++++|.+|+|||+|+.... ....|..+....++.++|.|.+.++.. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4799999999999999999999955899999999976532 234455443444667899999887763 567889
Q ss_pred ccccceecCcccccceeEeeCCccccchhhc-cCCCCCCccchHHHHHHhhcccCCCCCCCCCCCCCCccccccCCCCCh
Q psy8892 734 WPRGKAMGGTSVINYMVYSRGVPQDFDNWEA-LGNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTP 812 (1183)
Q Consensus 734 ~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~-~g~~gw~~~~l~py~~k~e~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 812 (1183)
|++|+++||+|.+|+|+|.|+.+.||+.|.+ +|+.+|+|++++|||+|+|++..+.. ...+|+..|++.+..+....+
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~-~~~~~g~~Gpl~v~~~~~~~~ 165 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGP-DAPHHGDSGPVHLMNVPPKDP 165 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBT-TBTTSCBSCSEEEEECCSCCH
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCC-ccccCCCCCCEEEecCCCCCH
Confidence 9999999999999999999999999999998 79999999999999999999876311 145788899999888777889
Q ss_pred HHHHHHHHHHHCCCCCCCC-CCC--Cceeeeeccccc-CCccchHHHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEE
Q psy8892 813 LSAAFLEAGSELGYDQVDH-CEN--PIGFSYVLANKI-RGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTY 888 (1183)
Q Consensus 813 ~~~~~~~~~~~~G~~~~d~-~~~--~~g~~~~~~~~~-~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~ 888 (1183)
..+.|.++++++|++..|+ ... +.|+++++..|. +|.|.++..+||.++.++.|++|++++.|++|+++++ ++++
T Consensus 166 ~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~ 244 (546)
T 2jbv_A 166 TGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD-RRCT 244 (546)
T ss_dssp HHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT-SBEE
T ss_pred HHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEE
Confidence 9999999999999988766 555 788999988888 8999999999999888789999999999999999763 6899
Q ss_pred EEEEeeC--CeEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCC-CCcccccccccceEEEEEcCcc
Q psy8892 889 GVEFSKN--RKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDHLSMAGLVFLVNSSV 965 (1183)
Q Consensus 889 GV~~~~~--~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlp-VG~nl~dh~~~~~~~~~~~~~~ 965 (1183)
||++... ++.++|+|+|+||||||+++||+||++|||||+++|+++||++++||| ||+|||||+.+ .+.+.++...
T Consensus 245 GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~~~~~~~~~ 323 (546)
T 2jbv_A 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG-VVQFEAKQPM 323 (546)
T ss_dssp EEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-CEEEEESSCC
T ss_pred EEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-eEEEEecCCC
Confidence 9999865 778899997799999999999999999999999999999999999999 99999999987 6777776431
Q ss_pred cccccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCCCCeeEeecCCcccCCCCCcchhhccccccccccc
Q psy8892 966 TIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKV 1045 (1183)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1183)
. .. . + +.....+|++..... ..|++++++.+....... ...+.
T Consensus 324 ~----~~------------~----~--~~~~~~~f~~~~~~~--~~p~~~~~~~~~~~~~~~-----~~~g~-------- 366 (546)
T 2jbv_A 324 V----AE------------S----T--QWWEIGIFTPTEDGL--DRPDLMMHYGSVPFDMNT-----LRHGY-------- 366 (546)
T ss_dssp C----SC------------C----S--SSCCEEEEECSSTTC--SSCSEEEEEESSCCCTTT-----GGGTC--------
T ss_pred c----cc------------c----c--chhheEEEEecCCCC--CCCceEEEeccccccccc-----cccCc--------
Confidence 1 00 0 1 233456787754321 168999887654321000 00000
Q ss_pred ccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCeeecCCCCChh--hHHHHHHHHHHHHHHHcChhhhHh
Q psy8892 1046 YRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSR--DLDVLIEAIKMAVELSETRAMQKY 1123 (1183)
Q Consensus 1046 ~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I~~~yls~~~--D~~~~~~~~~~~~~~~~~~~~~~~ 1123 (1183)
. ...+.+++.+++++|.||| +|+|+|+||++.|.|++||+++|. |++.|+++++++++++++.+++++
T Consensus 367 --~-~~~~~~~~~~~~~~P~srG-------~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 436 (546)
T 2jbv_A 367 --P-TTENGFSLTPNVTHARSRG-------TVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEW 436 (546)
T ss_dssp --C-CCSSEEEEEEEETTCCCCB-------EEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTT
T ss_pred --c-CCCCeEEEEEEEcccCccc-------EEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhc
Confidence 0 1235678888899999999 999999999999999999999999 999999999999999999999987
Q ss_pred hhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEcCC
Q psy8892 1124 ASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIMLSS 1179 (1183)
Q Consensus 1124 ~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd~~ 1179 (1183)
...+ ..|++ ..+|||+|+||+|+...+.+|++|||+||+.++...|||+.
T Consensus 437 ~~~~---~~p~~---~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~ 486 (546)
T 2jbv_A 437 TGRE---LSPGV---EAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPE 486 (546)
T ss_dssp EEEE---EESCT---TCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTT
T ss_pred cccc---ccCCC---CCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCC
Confidence 6543 25664 46899999999999999999999999999755567788875
No 9
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=1.3e-63 Score=612.10 Aligned_cols=458 Identities=28% Similarity=0.490 Sum_probs=374.9
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC-CCcccccccccccCCCCccCccccCccccccCCCCCeeec
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES-LLTDVPLFVSYMVDTDFNWGYKTEKDERFCRGMSDQTCNW 734 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~-~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 734 (1183)
.+|||||||||+||+++|.+|||++|++|||||+|+... .....|..+..+.++.++|.|.+.++.. +.++.+.|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~~ 91 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHHW 91 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCEE
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEec
Confidence 479999999999999999999997789999999998643 3345577777778889999999999988 78999999
Q ss_pred cccceecCcccccceeEeeCCccccchhhcc-CCCCCCccchHHHHHHhhcccCCCCCCCCCCCCCCccccccCC-CCCh
Q psy8892 735 PRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTS-WRTP 812 (1183)
Q Consensus 735 ~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~gw~~~~l~py~~k~e~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~ 812 (1183)
++|++|||+|.+|+|+|.|+.+.||+.|.+. ++++|+|++++|||++.|.+... ....++..|+....... ...+
T Consensus 92 ~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~---~~~~~~~~g~~~~~~~~~~~~p 168 (526)
T 3t37_A 92 ARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG---GDGIHGKGGPLPIHLPADEVSP 168 (526)
T ss_dssp CCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT---TSSSSCSSCSEECBCCSTTSCH
T ss_pred cCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC---CccccCcCCCcCcccccccCCH
Confidence 9999999999999999999999999999765 88999999999999999987653 34566777877765543 4467
Q ss_pred HHHHHHHHHHHCCCCCC-CC-CCCCceeeeecccccCCccchHHHhhhhhh-hcCCCcEEEcCcEEEEEEEcCCCCeEEE
Q psy8892 813 LSAAFLEAGSELGYDQV-DH-CENPIGFSYVLANKIRGARQSASKAFIRPI-RKRHNLKVAKEARVTKILIDPITKRTYG 889 (1183)
Q Consensus 813 ~~~~~~~~~~~~G~~~~-d~-~~~~~g~~~~~~~~~~g~r~~~~~~~L~~~-~~~~g~~i~~~t~V~~I~~~~~~gra~G 889 (1183)
+.+.|.++++++|++.. +. .+...++..+...+..|.|.++..+|+.+. ..++|++|++++.|++|++++ ++|+|
T Consensus 169 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~--~~a~g 246 (526)
T 3t37_A 169 LARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEG--NQVRS 246 (526)
T ss_dssp HHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEET--TEEEE
T ss_pred HHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecC--CeEEE
Confidence 88999999999999876 44 666777777788888899999988888664 568999999999999999987 79999
Q ss_pred EEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCC-CCcccccccccceEEEEEcCccccc
Q psy8892 890 VEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDHLSMAGLVFLVNSSVTIV 968 (1183)
Q Consensus 890 V~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlp-VG~nl~dh~~~~~~~~~~~~~~~~~ 968 (1183)
|++...++..++.| |+||||||+++||+||++|||||+.+|+++||++++||| ||+|||||+......|......
T Consensus 247 v~~~~~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~--- 322 (526)
T 3t37_A 247 LEVVGRQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV--- 322 (526)
T ss_dssp EEEEETTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC---
T ss_pred EEEEecCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc---
Confidence 99998888888999 899999999999999999999999999999999999999 9999999987533333333221
Q ss_pred ccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCCCCeeEeecCCcccCCCCCcchhhcccccccccccccC
Q psy8892 969 ESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRP 1048 (1183)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1183)
+...........|.+.........|++++.+.......+ .+..
T Consensus 323 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 365 (526)
T 3t37_A 323 -------------------PPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSE------------------SFPA 365 (526)
T ss_dssp -------------------CCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCT------------------TSCC
T ss_pred -------------------chHhhcchhhhhhhhcccccccCCcceeeeccccccccc------------------cccc
Confidence 111112334455665443322225777665433221111 1112
Q ss_pred CCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHHcChhhhHhhhccC
Q psy8892 1049 FAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKYASKLL 1128 (1183)
Q Consensus 1049 ~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I~~~yls~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1128 (1183)
......+++.+.+++|+||| +|+|+|+||.+.|+||+||++++.|++.|++++|.+++++++++|+.+...+.
T Consensus 366 ~~~~~~~~~~~~l~~p~srG-------~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~ 438 (526)
T 3t37_A 366 PAAGSAYSLLFGITHPTSRG-------SVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWREREL 438 (526)
T ss_dssp CCTTSEEEEEEEESSCCCCB-------EEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEEC
T ss_pred ccCCcceeeeccccCccccC-------cceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccccc
Confidence 23346788889999999999 99999999999999999999999999999999999999999999998876543
Q ss_pred CccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEcCC
Q psy8892 1129 PVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIMLSS 1179 (1183)
Q Consensus 1129 ~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd~~ 1179 (1183)
.|++ ..++++|++|||+.+.|.||++|||+||.++ ..|||+.
T Consensus 439 ---~pg~----~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~--~sVVD~~ 480 (526)
T 3t37_A 439 ---LPGT----PNSAAEMDDFIARSVITHHHPCGTCRMGKDP--DAVVDAN 480 (526)
T ss_dssp ---SSCC----CCSHHHHHHHHHHHEEECSCCBCTTCBCSST--TCSBCTT
T ss_pred ---CCCC----CCCHHHHHHHHHhcCccCcccCccccCCCCC--CccCCCC
Confidence 6775 3799999999999999999999999999643 4678865
No 10
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.3e-62 Score=603.03 Aligned_cols=499 Identities=24% Similarity=0.295 Sum_probs=365.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCC--Ccc-cccccccccCCCCCCCcccccCCCcccCCCCCee
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII--LDE-IPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQRC 122 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~--~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1183)
.+|||||||+|++|+++|.+|++++|++|+|||+|..... ... .|..........++|.|.+.+ . ++++.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~----~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--L----INNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--C----TTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--C----CCCcee
Confidence 5799999999999999999999944999999999986432 123 555554555567889988776 2 578889
Q ss_pred ccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHHc-CCCCCCccchHHH
Q psy8892 123 NWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPY 201 (1183)
Q Consensus 123 ~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~~-~~~~w~~~~l~~~ 201 (1183)
.|++|+++||+|.+|++.|. |+.+.||+.|+.. |+.+|+|++++||
T Consensus 97 ~~~rGk~lGGsS~in~~~~~---------------------------------R~~~~D~d~W~~~~G~~gW~~~~l~py 143 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWT---------------------------------RPDKVQIDSWEKVFGMEGWNWDNMFEY 143 (587)
T ss_dssp EECCBCSTTGGGGTSCCEEC---------------------------------CCCHHHHHHHHHTTCCTTCSHHHHHHH
T ss_pred eeeccccccccccccceEEe---------------------------------cCCHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 99999999999999999999 9999999999988 9999999999999
Q ss_pred HHHhccCCCCCC--------CCCCCCCCCcceeecCC---CCCchHHHHHHHHHHHcCCC-CCCCCCCCCcceeeeeccc
Q psy8892 202 FKKSEDMKTAEL--------KSSPYHGVGGYLKIERP---LWRTPLAKCVLDAGHEMGYD-IVDPSEPNAIGFSYVLANT 269 (1183)
Q Consensus 202 ~~~~e~~~~~~~--------~~~~~~~~~g~l~~~~~---~~~~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~ 269 (1183)
|+++|++..... ....+|+.+|++.++.+ ....+..+.+.++++++|++ ..+++.....|++.|..+.
T Consensus 144 f~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~ 223 (587)
T 1gpe_A 144 MKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNL 223 (587)
T ss_dssp HHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESB
T ss_pred HHHHhcccCCcccccccccccCccccCCCCCEEEccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEE
Confidence 999999875421 13457888899988854 35578889999999999999 5678887788888887654
Q ss_pred -CCCcccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEE-eCCeEEEEEeCcEEEEcCCCCCChHHHH
Q psy8892 270 -GNGERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFF-KNKQRHTVRARKEVILSAGALNSPQLLM 347 (1183)
Q Consensus 270 -~~g~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~-~~g~~~~i~A~k~VILAAGai~sp~LLl 347 (1183)
..|.|+++..+||.++.+++|++|++++.|++|++++++++.+|+||++. .+++..+|+|+|+||||||+|+||+||+
T Consensus 224 ~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~ 303 (587)
T 1gpe_A 224 DENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILE 303 (587)
T ss_dssp CTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred CCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHH
Confidence 57899999999998888889999999999999999853211289999998 6788889999778999999999999999
Q ss_pred HhCCCChhhhhhcCCCceecCccccccccCcccceEEEEEcCchhhhhHhhhcCCCCCcccccccccccccccccccccc
Q psy8892 348 LSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQD 427 (1183)
Q Consensus 348 ~SGig~~~~l~~~gi~~~~~~pVG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1183)
+|||||+++|+++||++++|+|||+|||||+.+.+ .+.++.+... . +. +
T Consensus 304 ~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~~~~~-~~~~~~~~~~---~--------~~------~------------- 352 (587)
T 1gpe_A 304 YSGIGLKSVLDQANVTQLLDLPVGINMQDQTTTTV-SSRASSAGAG---Q--------GQ------A------------- 352 (587)
T ss_dssp HTTEECHHHHHHTTCCCSEECCTTCSBBCCEEEEE-EEEECGGGCS---B--------CE------E-------------
T ss_pred hCCCCCHHHHHhCCCCeEEeCCCCcchhcCcccce-EEEeCCCccc---c--------cc------h-------------
Confidence 99999999999999999999999999999987654 6666542110 0 00 0
Q ss_pred ccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCCC---C-CC--CCcEeEeecCCccC
Q psy8892 428 HVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFEN---D-KT--RPDIELVFGPGALT 501 (1183)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~~~~~ 501 (1183)
..... ...+|...+.|+++.. ..+...|....... . .. .|+++..+... ..
T Consensus 353 -~~~~~--------------------~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 409 (587)
T 1gpe_A 353 -VFFAN--------------------FTETFGDYAPQARDLL-NTKLDQWAEETVARGGFHNVTALKVQYENYRNWL-LD 409 (587)
T ss_dssp -EEEEE--------------------HHHHHGGGHHHHHHHH-HHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHH-HH
T ss_pred -HHHHH--------------------HHHHHHhCCCCCcccc-ccceeeEeecccccccccccccccccHHHHhhhc-cC
Confidence 00000 0011111111211110 00000111000000 0 00 01111000000 00
Q ss_pred CCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCC-eeeCCCCCChhhHHHHHHHHHH
Q psy8892 502 GDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSP-KFYPNYLSDSRDLDVLIEAIKM 580 (1183)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P-~i~~~y~~~~~D~~~~~~~~~~ 580 (1183)
.. .+ ..+..+.+ ...+++...+++|.|||+|+|+++||++.| .|++||+.+|.|++.+++++++
T Consensus 410 ~~----------~~--~~~~~~~~---~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~ 474 (587)
T 1gpe_A 410 ED----------VA--FAELFMDT---EGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKL 474 (587)
T ss_dssp SC----------CE--EEEEEEEC---TTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CC----------Cc--ceeeeecC---CCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHH
Confidence 00 00 00000001 135777888999999999999999999999 9999999999999999999999
Q ss_pred HHHhhhccccc--cccccCCCC------ccchHHHHHHhccc-------cc-cc----ccccCCcceeeecccccccccc
Q psy8892 581 CALFSLVCHLL--VLSVAHAQS------QLFRTECALFSLVC-------HL-LL----LSVAHAQSQLFRTFINMVSKDA 640 (1183)
Q Consensus 581 ~~~~~~~~~~~--~~~~~~~g~------~~~~~~~~~~~~~~-------t~-~g----~~VVD~~~rV~~gv~nLrV~D~ 640 (1183)
+++++++..+. ...+..|+. ....|++|+++... || || +||||++|||| |++||||||+
T Consensus 475 ~~~i~~~~~~~~~~~~~~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~-Gv~nLrVvDa 553 (587)
T 1gpe_A 475 ARDLTSQGAMKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVY-GTQGLRVIDG 553 (587)
T ss_dssp HHHHHTSTTHHHHEEEEEESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBT-TCBSEEECST
T ss_pred HHHHHcCcchhhhcccccCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEE-CCCCcEEeee
Confidence 99998665431 112223332 33458889987543 33 66 68999999999 9999999999
Q ss_pred ccccccccccccc
Q psy8892 641 ILTPSNIVQDTKI 653 (1183)
Q Consensus 641 s~~p~~~~~np~~ 653 (1183)
||||++++.||+.
T Consensus 554 Sv~P~~~~~Np~~ 566 (587)
T 1gpe_A 554 SIPPTQVSSHVMT 566 (587)
T ss_dssp TCCSSCCSSCSHH
T ss_pred ccCCCCCCcchHH
Confidence 9999999999997
No 11
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=7.1e-61 Score=587.71 Aligned_cols=483 Identities=28% Similarity=0.436 Sum_probs=376.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCC-CCcccccccccccCCCCCCCcccccCCCcccCCCCCeec
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQRCN 123 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1183)
..+|||||||||++|+++|.+|||++|++|||||+|+... .....|.....+.+..++|.|.+.++.. ++++.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~ 90 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHH 90 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCE
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEe
Confidence 4589999999999999999999996689999999998643 2335566677777888999999988876 5788999
Q ss_pred cCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHH-cCCCCCCccchHHHH
Q psy8892 124 WPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAA-LGNIGWSFEEVLPYF 202 (1183)
Q Consensus 124 ~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~-~~~~~w~~~~l~~~~ 202 (1183)
|++|+++||+|.+|++.|. |+.+.||+.|++ .++++|+|+++.|||
T Consensus 91 ~~rG~~lGGsS~in~~~~~---------------------------------R~~~~Dfd~w~~~~~~~~w~~~~~~pyf 137 (526)
T 3t37_A 91 WARGRLIGGSSCLHAMGYM---------------------------------RGHPSDFQAWVDASGDRRWGWDELLPVF 137 (526)
T ss_dssp ECCBCBTTGGGGTSCCBCC---------------------------------CCCHHHHHHHHHHHSCGGGSHHHHHHHH
T ss_pred ccCccEECcHHHHhhCEEe---------------------------------cCCHHHHHHHHHhcCCCCCChhhhhhhh
Confidence 9999999999999999998 999999999976 688999999999999
Q ss_pred HHhccCCCCCCCCCCCCCCCcceeecCCC-CCchHHHHHHHHHHHcCCC-CCCCCCCCCcceeeeecccCCCcccchhhh
Q psy8892 203 KKSEDMKTAELKSSPYHGVGGYLKIERPL-WRTPLAKCVLDAGHEMGYD-IVDPSEPNAIGFSYVLANTGNGERYSASRA 280 (1183)
Q Consensus 203 ~~~e~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~ 280 (1183)
++.|..... ....++..|+....... ...++.+.+.++++++|++ ..+.+...+.++..+...+..|.+.++..+
T Consensus 138 ~~~E~~~~~---~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~ 214 (526)
T 3t37_A 138 QAIEDHPLG---GDGIHGKGGPLPIHLPADEVSPLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADA 214 (526)
T ss_dssp HHHEECTTT---TSSSSCSSCSEECBCCSTTSCHHHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHH
T ss_pred hhhhhccCC---CccccCcCCCcCcccccccCCHHHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccc
Confidence 999987532 33456666776665543 3468888999999999998 566677777788888888888999998888
Q ss_pred hhhcc-cCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCCChhhhhh
Q psy8892 281 FLRPI-RKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIGPRDHLEE 359 (1183)
Q Consensus 281 ~l~~~-~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig~~~~l~~ 359 (1183)
++.+. ..++|++|++++.|++|+++++ +++||++...++..++.|+ +||||||+|+||+|||+||||++..|++
T Consensus 215 ~~~~~~~~r~nl~v~~~~~v~~i~~~~~----~a~gv~~~~~~~~~~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~ 289 (526)
T 3t37_A 215 WLTKAVRGRKNLTILTGSRVRRLKLEGN----QVRSLEVVGRQGSAEVFAD-QIVLCAGALESPALLMRSGIGPHDVLDA 289 (526)
T ss_dssp HSCHHHHTCTTEEEECSCEEEEEEEETT----EEEEEEEEETTEEEEEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHH
T ss_pred cccccccCCCCeEEEeCCEEEEEEecCC----eEEEEEEEecCceEEEeec-ceEEcccccCCcchhhhccCCchhhhhc
Confidence 87654 5689999999999999999988 9999999988888888885 7999999999999999999999999999
Q ss_pred cCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccccccchhchhhhc
Q psy8892 360 MNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLV 438 (1183)
Q Consensus 360 ~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1183)
+||+++.|+| ||+|||||+......+..+.+..
T Consensus 290 ~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~---------------------------------------------- 323 (526)
T 3t37_A 290 AGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPVP---------------------------------------------- 323 (526)
T ss_dssp HTCCCSEECTTTTCSBBCCEEEEEEEEEESSCCC----------------------------------------------
T ss_pred cCCCeEecCCccccccccccccceeEEeccCCcc----------------------------------------------
Confidence 9999999999 99999999755442333222110
Q ss_pred ccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCCCCCCCCcEeEeecCCccCCCCCcccccccccchhh
Q psy8892 439 NDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKF 518 (1183)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1183)
.......+...+...........|++++.+....+...
T Consensus 324 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 361 (526)
T 3t37_A 324 ---------------------------PSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSE--------------- 361 (526)
T ss_dssp ---------------------------CCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCT---------------
T ss_pred ---------------------------hHhhcchhhhhhhhcccccccCCcceeeeccccccccc---------------
Confidence 00000011222322222122344555554433221111
Q ss_pred hhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHhhhccccc--ccccc
Q psy8892 519 YRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMCALFSLVCHLL--VLSVA 596 (1183)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~ 596 (1183)
.+........+++...+++|.|||+|+++++||++.|.|+++|+.++.|++.++++++.+++++.+..+. ...+.
T Consensus 362 ---~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~ 438 (526)
T 3t37_A 362 ---SFPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWREREL 438 (526)
T ss_dssp ---TSCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEEC
T ss_pred ---ccccccCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccccc
Confidence 0111223467888889999999999999999999999999999999999999999999999997665432 22333
Q ss_pred CCCCc--cchHHHHHHhcc-------ccc-cc---ccccCCcceeeecccccccccccccccccccccccccccceEEee
Q psy8892 597 HAQSQ--LFRTECALFSLV-------CHL-LL---LSVAHAQSQLFRTFINMVSKDAILTPSNIVQDTKIFEKEYDFIVI 663 (1183)
Q Consensus 597 ~~g~~--~~~~~~~~~~~~-------~t~-~g---~~VVD~~~rV~~gv~nLrV~D~s~~p~~~~~np~~~~~~~D~VVI 663 (1183)
.|+.. ...+++|+++.. +|| || +||||++|||| |++||||||+||||+++++||+.
T Consensus 439 ~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~-Gv~nL~VvDaSv~P~~~~~np~~---------- 507 (526)
T 3t37_A 439 LPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLK-ALDNLFVVDASIMPNLTAGPIHA---------- 507 (526)
T ss_dssp SSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBT-TCSSEEECSGGGCSSCCSSCCHH----------
T ss_pred CCCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEc-CCCCeEEEEcCcccCCcChHHHH----------
Confidence 44433 334888888654 344 66 78999999999 99999999999999999999987
Q ss_pred CCCchHHHHHHHHhc
Q psy8892 664 GAGSGGSVIANRLTE 678 (1183)
Q Consensus 664 GsG~aG~~~A~~Lae 678 (1183)
.=..+|-++|+
T Consensus 508 ----ti~aiAEkaAd 518 (526)
T 3t37_A 508 ----AVLAIAETFAR 518 (526)
T ss_dssp ----HHHHHHHHHHH
T ss_pred ----HHHHHHHHHHH
Confidence 33456777776
No 12
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=5.5e-60 Score=576.15 Aligned_cols=484 Identities=27% Similarity=0.415 Sum_probs=381.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCC--CcccccccccccCCCCCCCcccccCCCcccCCCCCeec
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII--LDEIPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQRCN 123 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1183)
.+|||||||+|++|+++|++|++++|.+|+|||+|+.... ....|......++...+|.|.+.++.. +++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4799999999999999999999976899999999986432 223444443334566789988877653 567789
Q ss_pred cCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHH-cCCCCCCccchHHHH
Q psy8892 124 WPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAA-LGNIGWSFEEVLPYF 202 (1183)
Q Consensus 124 ~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~-~~~~~w~~~~l~~~~ 202 (1183)
|++|+++||+|.+|++.|. |+.+.||+.|++ +|+.+|+|++++|||
T Consensus 87 ~~rGk~lGGsS~in~~~~~---------------------------------R~~~~d~d~w~~~~G~~gW~~~~l~pyf 133 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAF---------------------------------WAPREDLDEWEAKYGATGWNAEAAWPLY 133 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCC---------------------------------CCCHHHHHHHHHTTCCTTCSHHHHHHHH
T ss_pred eecccccccCccccceEEe---------------------------------cCCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 9999999999999999988 999999999998 899999999999999
Q ss_pred HHhccCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHHcCCCCCCCCCCC--CcceeeeecccC-CCcccchhh
Q psy8892 203 KKSEDMKTAELKSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPN--AIGFSYVLANTG-NGERYSASR 279 (1183)
Q Consensus 203 ~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--~~g~~~~~~~~~-~g~r~s~~~ 279 (1183)
+++|++.... ....+|+..|++.+..+....+..+.+.++++++|++..+++... +.|++.|...|. .|.|+++..
T Consensus 134 ~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~~~~~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~ 212 (546)
T 2jbv_A 134 KRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSV 212 (546)
T ss_dssp HHHEEETTCB-TTBTTSCBSCSEEEEECCSCCHHHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHH
T ss_pred HHHhhccCCC-CccccCCCCCCEEEecCCCCCHHHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHH
Confidence 9999986521 114578888999988777778999999999999999944777767 889999998888 899999999
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeC--CeEEEEEeCcEEEEcCCCCCChHHHHHhCCCChhhh
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKN--KQRHTVRARKEVILSAGALNSPQLLMLSGIGPRDHL 357 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~--g~~~~i~A~k~VILAAGai~sp~LLl~SGig~~~~l 357 (1183)
+|+.++.++.|++|++++.|++|++++++ +++||++.+. ++..+|+|+|+||||||+|+||+||++|||||+++|
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~~---~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L 289 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDADR---RCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHL 289 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTTS---BEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHH
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCCC---eEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHH
Confidence 99998888899999999999999998722 8999999876 777889998789999999999999999999999999
Q ss_pred hhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccccccchhchhh
Q psy8892 358 EEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVF 436 (1183)
Q Consensus 358 ~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1183)
+++||++++|+| ||+|||||+.+.+ .+.++.+.. . +
T Consensus 290 ~~~gi~~~~dlP~VG~nL~dH~~~~~-~~~~~~~~~--~---------------------------~------------- 326 (546)
T 2jbv_A 290 AEHGIEVLVDSPGVGEHLQDHPEGVV-QFEAKQPMV--A---------------------------E------------- 326 (546)
T ss_dssp HHTTCCCSEECTTTTCSBBCCEECCE-EEEESSCCC--S---------------------------C-------------
T ss_pred HhcCCceEeeCcchhhhhhhCccceE-EEEecCCCc--c---------------------------c-------------
Confidence 999999999999 9999999987665 565543200 0 0
Q ss_pred hcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCCCCCCCCcEeEeecCCccCCCCCcccccccccch
Q psy8892 437 LVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISD 516 (1183)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1183)
. . ...+...|..... ....|++++.+.+...... . ...+.
T Consensus 327 -------------------------~----~--~~~~~~~f~~~~~--~~~~p~~~~~~~~~~~~~~----~-~~~g~-- 366 (546)
T 2jbv_A 327 -------------------------S----T--QWWEIGIFTPTED--GLDRPDLMMHYGSVPFDMN----T-LRHGY-- 366 (546)
T ss_dssp -------------------------C----S--SSCCEEEEECSST--TCSSCSEEEEEESSCCCTT----T-GGGTC--
T ss_pred -------------------------c----c--chhheEEEEecCC--CCCCCceEEEecccccccc----c-cccCc--
Confidence 0 0 0112334544321 1356778777655322100 0 00000
Q ss_pred hhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCeeeCCCCCChh--hHHHHHHHHHHHHHhhhccccc--c
Q psy8892 517 KFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSR--DLDVLIEAIKMCALFSLVCHLL--V 592 (1183)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i~~~y~~~~~--D~~~~~~~~~~~~~~~~~~~~~--~ 592 (1183)
. .....+++.+.+++|.|||+|+|+++||++.|.|+++|+.+|. |++.++++++++++++++..+. .
T Consensus 367 --------~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 437 (546)
T 2jbv_A 367 --------P-TTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWT 437 (546)
T ss_dssp --------C-CCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTE
T ss_pred --------c-CCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcc
Confidence 0 1124677788899999999999999999999999999999999 9999999999999998665432 1
Q ss_pred ccccCCCCc---cchHHHHHHhccc-------cc-cc-----ccccCCcceeeecccccccccccccccccccccccccc
Q psy8892 593 LSVAHAQSQ---LFRTECALFSLVC-------HL-LL-----LSVAHAQSQLFRTFINMVSKDAILTPSNIVQDTKIFEK 656 (1183)
Q Consensus 593 ~~~~~~g~~---~~~~~~~~~~~~~-------t~-~g-----~~VVD~~~rV~~gv~nLrV~D~s~~p~~~~~np~~~~~ 656 (1183)
..+..|+.. ...|++|+++... || || +||||++|||| |++||||||+||||++++.||++
T Consensus 438 ~~~~~p~~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~-Gv~nLrVvDaSv~P~~~~~np~~--- 513 (546)
T 2jbv_A 438 GRELSPGVEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVK-GVTGLRVADASVMPEHVTVNPNI--- 513 (546)
T ss_dssp EEEEESCTTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBT-TSBSEEECSGGGCSSCCSSCCHH---
T ss_pred cccccCCCCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEE-CCCCeEEeecccCCCCCCcchHH---
Confidence 222334432 3358888886543 33 55 38999999999 99999999999999999999998
Q ss_pred cceEEeeCCCchHHHHHHHHhc
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTE 678 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae 678 (1183)
.-..+|.++|+
T Consensus 514 -----------ti~aiAeraAd 524 (546)
T 2jbv_A 514 -----------TVMMIGERCAD 524 (546)
T ss_dssp -----------HHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHH
Confidence 45566777766
No 13
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.8e-56 Score=544.00 Aligned_cols=438 Identities=26% Similarity=0.314 Sum_probs=310.4
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC--CCcccccccccccCCCCccCccccCccccccCCCCCee
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES--LLTDVPLFVSYMVDTDFNWGYKTEKDERFCRGMSDQTC 732 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~--~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 732 (1183)
..+|||||||||+||+++|.+|+| |.+|||||+|+... .....+..+..... ..+| |.+.++.. +.++.+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~~q~~----~~~~~~ 95 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ-QEDD-GKTPVERF----VSEDGI 95 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-SCCC-SSSSEEEE----ECTTSC
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-CCCc-CcCCCccc----cCCCcc
Confidence 467999999999999999999999 79999999998642 11222221111111 1234 56666654 456778
Q ss_pred eccccceecCcccccceeEeeCCccccchhhccCCCCCCccchHHHHHHhhcccCCCCCCCCCCCCCCccccccCCCCCh
Q psy8892 733 NWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTP 812 (1183)
Q Consensus 733 ~~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~gw~~~~l~py~~k~e~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 812 (1183)
.+++|+++||+|.+|+|+|.|+.+.||+.+ | .+|.|++++|||+++|+.... .+...+
T Consensus 96 ~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~------------------~~~~~~ 153 (536)
T 1ju2_A 96 DNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVY------------------KPNSQS 153 (536)
T ss_dssp EEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCB------------------CCCCCH
T ss_pred eeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCC------------------CCCCCc
Confidence 899999999999999999999999999853 1 259999999999999986421 112345
Q ss_pred HHHHHHHHHHHCCCCCC-CCC-CCCceee--eecccccCCccchHHHhhhhhhhcCCCcEEEcCcEEEEEEEcCC-CCeE
Q psy8892 813 LSAAFLEAGSELGYDQV-DHC-ENPIGFS--YVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPI-TKRT 887 (1183)
Q Consensus 813 ~~~~~~~~~~~~G~~~~-d~~-~~~~g~~--~~~~~~~~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~-~gra 887 (1183)
....+.++++++|++.. ... ....|.. .+. ...+|.|+++.. |+. .+++.|++|++++.|++|+++++ ++++
T Consensus 154 ~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~-~~~~g~r~s~~~-~~~-~~~~~~~~v~~~~~v~~i~~~~~~~~~~ 230 (536)
T 1ju2_A 154 WQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGST-FDNKGTRHAADE-LLN-KGNSNNLRVGVHASVEKIIFSNAPGLTA 230 (536)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCBCCSEEEECEES-BCTTSBBCCGGG-GGG-GSCTTTEEEEESCEEEEEEECCSSSCBE
T ss_pred HHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEE-ECCCCeEecHHH-hhh-hhcCCCcEEEeCCEEEEEEECCCCCCEE
Confidence 67788899999998542 110 1111211 111 125678887766 664 45789999999999999999863 2499
Q ss_pred EEEEEee-CCeEEEEE--eccEEEEccCccCcHHHHHHcCCCCccchhhcCCCccccCC-CCcccccccccceEEEEEcC
Q psy8892 888 YGVEFSK-NRKSYTVK--CRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQDHLSMAGLVFLVNS 963 (1183)
Q Consensus 888 ~GV~~~~-~~~~~~i~--A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~gi~v~~dlp-VG~nl~dh~~~~~~~~~~~~ 963 (1183)
+||++.+ +++.++++ ++|+||||||+|+||+||++|||||+++|+++||++++||| ||+|||||+.. .+.+.++.
T Consensus 231 ~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~~~~~~~ 309 (536)
T 1ju2_A 231 TGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRN-FINILPPN 309 (536)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEE-EEEECCSS
T ss_pred EEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcce-eEEEEeCC
Confidence 9999985 56665664 66999999999999999999999999999999999999999 99999999985 66665543
Q ss_pred cccccccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCCCCeeEeecCCcccCCCCCcchhhccccccccc
Q psy8892 964 SVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYN 1043 (1183)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1183)
............ ..+|...+.|+++. . .+.+ .+++.. .
T Consensus 310 ~~~~~~~~~~~~--~~~~~~~~~g~~~~------------~------~~~~--~~~~~~----~---------------- 347 (536)
T 1ju2_A 310 PIEPTIVTVLGI--SNDFYQCSFSSLPF------------T------TPPF--GFFPSS----S---------------- 347 (536)
T ss_dssp CCCCCCCCEEEE--CSSEEEEEEEECCC------------S------SCCB--TTBSSS----C----------------
T ss_pred CcccccchhhhH--HHHHHHcCCCCCCC------------C------hhhh--eeecCc----c----------------
Confidence 321000000000 00122222222210 0 0100 011100 0
Q ss_pred ccccCCCCCCeEEEEEeeccccCCCcccCcceEEEe-cCCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHHcChhhhH
Q psy8892 1044 KVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKL-RSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQK 1122 (1183)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l-~s~dp~~~P~I~~~yls~~~D~~~~~~~~~~~~~~~~~~~~~~ 1122 (1183)
...+...+..+...+++|+||| +|+| +|+||++.|.|++|||++|.|++.|+++++.+++++++++|++
T Consensus 348 ---~~~~~~~~~~~~~~l~~P~SrG-------~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 417 (536)
T 1ju2_A 348 ---YPLPNSTFAHFASKVAGPLSYG-------SLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKP 417 (536)
T ss_dssp ---CCCCSSCEEEEEEEESSCSCCE-------EEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGG
T ss_pred ---cCCCCcceEEEeeecCCCCcce-------EEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchh
Confidence 0011122345667789999999 9999 9999999999999999999999999999999999999999999
Q ss_pred hhhccCCccCCCCCC------CCCCCHHHHHHHHHhcCCCCcccccccccccCC---------CCcEEEcCC
Q psy8892 1123 YASKLLPVKFPGCEP------YEFRSDEYWACAARQLTTNLHHQICPHIADAVD---------RRGEIMLSS 1179 (1183)
Q Consensus 1123 ~~~~~~~~~~p~~~~------~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~---------~~~~Vvd~~ 1179 (1183)
+...+. ...|++.. ...++|++|+||+|+...|.||++|||+||.+. ++..|||+|
T Consensus 418 ~~~~~~-~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaS 488 (536)
T 1ju2_A 418 YKVEDL-PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGS 488 (536)
T ss_dssp GCSSCC-STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGG
T ss_pred hhcccc-ccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEcCCCCeEEeecc
Confidence 875532 12333211 124699999999999999999999999999432 355666665
No 14
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=7e-52 Score=503.56 Aligned_cols=446 Identities=24% Similarity=0.247 Sum_probs=298.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCC--CCcccccccccccCCCCCCCcccccCCCcccCCCCCe
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI--ILDEIPLFVSHIVSSDFNWGYTTEKTDGICKGMKNQR 121 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1183)
+..+|||||||||++|+++|.+|++ |.+|||||+|+... .....|..+...... ..| |.+.++.. ..++.
T Consensus 23 ~~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~-~~~-~~t~~q~~----~~~~~ 94 (536)
T 1ju2_A 23 LEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ-EDD-GKTPVERF----VSEDG 94 (536)
T ss_dssp SEEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS-CCC-SSSSEEEE----ECTTS
T ss_pred ccCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC-CCc-CcCCCccc----cCCCc
Confidence 4467999999999999999999998 79999999998532 111122111111111 123 34444432 34566
Q ss_pred eccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHHHHHcCCCCCCccchHHH
Q psy8892 122 CNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPY 201 (1183)
Q Consensus 122 ~~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~w~~~~~~~w~~~~l~~~ 201 (1183)
+.+++|+++||+|.+|++.|. |+.+.||+.+ ..+|.|+++.||
T Consensus 95 ~~~~rg~~lGGsS~in~~~~~---------------------------------R~~~~d~~~~----G~~W~~~~~~p~ 137 (536)
T 1ju2_A 95 IDNVRGRVLGGTSIINAGVYA---------------------------------RANTSIYSAS----GVDWDMDLVNQT 137 (536)
T ss_dssp CEEEEECBTTGGGGTSCCEEC---------------------------------BCCTTSSTTS----SSCCCHHHHHHH
T ss_pred ceeecceeccccccccCeEEE---------------------------------eCCHHHHhhc----cCCCChHHHHHH
Confidence 788999999999999999999 5555555411 123899999999
Q ss_pred HHHhccCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHHcCCCCC-CCCCCCCcceeee-ecccCCCcccchhh
Q psy8892 202 FKKSEDMKTAELKSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYV-LANTGNGERYSASR 279 (1183)
Q Consensus 202 ~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~~-~~~~~~g~r~s~~~ 279 (1183)
|+++|+.... .....+....+.++++++|++.. ........++... ...+..|.|+++..
T Consensus 138 ~~~~e~~~~~------------------~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~ 199 (536)
T 1ju2_A 138 YEWVEDTIVY------------------KPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADE 199 (536)
T ss_dssp HHHHHHHHCB------------------CCCCCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBCCGGG
T ss_pred HHhhhcccCC------------------CCCCCcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEecHHH
Confidence 9999886421 01124566778888899998521 1000111121110 11135778887766
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-CCeEEEEE--eCcEEEEcCCCCCChHHHHHhCCCChhh
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NKQRHTVR--ARKEVILSAGALNSPQLLMLSGIGPRDH 356 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-~g~~~~i~--A~k~VILAAGai~sp~LLl~SGig~~~~ 356 (1183)
++.. +++.|++|++++.|++|++++++ +.+++||++.+ +++.++++ ++++||||||+|+||+||++|||||.++
T Consensus 200 -~~~~-~~~~~~~v~~~~~v~~i~~~~~~-~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~ 276 (536)
T 1ju2_A 200 -LLNK-GNSNNLRVGVHASVEKIIFSNAP-GLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESY 276 (536)
T ss_dssp -GGGG-SCTTTEEEEESCEEEEEEECCSS-SCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHH
T ss_pred -hhhh-hcCCCcEEEeCCEEEEEEECCCC-CCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHH
Confidence 6654 57889999999999999998631 11899999986 56555554 6678999999999999999999999999
Q ss_pred hhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCccccccccccccccccccccccccchhchh
Q psy8892 357 LEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLV 435 (1183)
Q Consensus 357 l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1183)
|+++||++++|+| ||+|||||+...+ .+..+.+... + + .....
T Consensus 277 l~~~gi~~~~dlP~VG~NL~DH~~~~~-~~~~~~~~~~-------~---------------------~-----~~~~~-- 320 (536)
T 1ju2_A 277 LSSLNIPVVLSHPYVGQFLHDNPRNFI-NILPPNPIEP-------T---------------------I-----VTVLG-- 320 (536)
T ss_dssp HHHTTCCCSEECTTTTEEEECCEEEEE-EECCSSCCCC-------C---------------------C-----CCEEE--
T ss_pred HHhcCCceEecCcccccchhcCcceeE-EEEeCCCccc-------c---------------------c-----chhhh--
Confidence 9999999999999 9999999985543 4443321100 0 0 00000
Q ss_pred hhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCCCCCCCCcEeEeecCCccCCCCCcccccccccc
Q psy8892 436 FLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGIS 515 (1183)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1183)
.. .+|...+.|+++.. .+.+ .+.+ .. .
T Consensus 321 -------------~~-----~~~~~~~~g~~~~~------------------~~~~--~~~~----~~-~---------- 347 (536)
T 1ju2_A 321 -------------IS-----NDFYQCSFSSLPFT------------------TPPF--GFFP----SS-S---------- 347 (536)
T ss_dssp -------------EC-----SSEEEEEEEECCCS------------------SCCB--TTBS----SS-C----------
T ss_pred -------------HH-----HHHHHcCCCCCCCC------------------hhhh--eeec----Cc-c----------
Confidence 00 00000111111110 0000 0000 00 0
Q ss_pred hhhhhcccCCCCCCCeEEEEeeecccCCceEEEe-eCCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHhhhccccccc-
Q psy8892 516 DKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKL-RSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMCALFSLVCHLLVL- 593 (1183)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l-~s~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~- 593 (1183)
.......+..+...+++|.|||+|+| +|+||++.|.|++||+.+|.|++.++++++++++++.+..+...
T Consensus 348 --------~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 419 (536)
T 1ju2_A 348 --------YPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYK 419 (536)
T ss_dssp --------CCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGC
T ss_pred --------cCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhh
Confidence 00011123455667789999999999 99999999999999999999999999999999999876543211
Q ss_pred -ccc------------CCC--CccchHHHHHHhccccc---cc----ccccCCcceeeeccccccccccccccccccccc
Q psy8892 594 -SVA------------HAQ--SQLFRTECALFSLVCHL---LL----LSVAHAQSQLFRTFINMVSKDAILTPSNIVQDT 651 (1183)
Q Consensus 594 -~~~------------~~g--~~~~~~~~~~~~~~~t~---~g----~~VVD~~~rV~~gv~nLrV~D~s~~p~~~~~np 651 (1183)
.+. .|+ .....|++|+++...+. || ++|||++|||| |++||||||+||||++++.||
T Consensus 420 ~~~~~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~-Gv~nLrVvDaSv~P~~~~~np 498 (536)
T 1ju2_A 420 VEDLPGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVT-GINALRVVDGSTFPYTPASHP 498 (536)
T ss_dssp SSCCSTTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBT-TCBTEEECSGGGCSSCSSSSC
T ss_pred ccccccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEc-CCCCeEEeecccCCCCCCcch
Confidence 110 111 12345889998765443 33 57999999999 999999999999999999999
Q ss_pred cc
Q psy8892 652 KI 653 (1183)
Q Consensus 652 ~~ 653 (1183)
+.
T Consensus 499 ~~ 500 (536)
T 1ju2_A 499 QG 500 (536)
T ss_dssp HH
T ss_pred HH
Confidence 97
No 15
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=2.1e-51 Score=503.80 Aligned_cols=458 Identities=22% Similarity=0.309 Sum_probs=323.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCCCc--cc-ccccccccCCCCcc------CccccCcccccc
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLT--DV-PLFVSYMVDTDFNW------GYKTEKDERFCR 725 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~~~--~~-p~~~~~~~~~~~~w------~~~~~~~~~~~~ 725 (1183)
+.+||+||||||++|+++|.+|++ .|++|+|||+|+...... .. +..........+++ .+. .+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~--- 79 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFT-DSNPF--- 79 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGT-CSCCT---
T ss_pred CCceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhc-CCCcc---
Confidence 357999999999999999999999 599999999997532100 00 00000000000000 000 00000
Q ss_pred CCCCCeeeccccceecCcccccceeEeeCCccccch---hhccCCCCCCccchHHHHHHhhcccCCCCCCCCCCCCCCcc
Q psy8892 726 GMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDN---WEALGNPGWSYRDVLPYFKKSEDISVSRLKGSPYHGIGGYL 802 (1183)
Q Consensus 726 ~~~~~~~~~~~G~~lGGsS~~n~~~~~r~~~~d~~~---w~~~g~~gw~~~~l~py~~k~e~~~~~~~~~~~~~~~~G~~ 802 (1183)
.......+++|+++||+|.+|+|++.|+.+.||+. | ..+|+|++ |||+|+|...+.. ..+...|+
T Consensus 80 -~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~~----~~~~~~g~- 147 (546)
T 1kdg_A 80 -WWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPST----DHPSTDGQ- 147 (546)
T ss_dssp -TBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCCB----SCCSTTSC-
T ss_pred -ccccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCCC----ccCCCCCC-
Confidence 01123567899999999999999999999999998 8 35788888 9999999865421 12222232
Q ss_pred ccccCCCCChHHHHHHHHHHHCCCCCCCC----CCCCceeeeecccccCCccchHHHhhhhhhhcCCCcEEEcCcEEEEE
Q psy8892 803 KVEQTSWRTPLSAAFLEAGSELGYDQVDH----CENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKI 878 (1183)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~G~~~~d~----~~~~~g~~~~~~~~~~g~r~~~~~~~L~~~~~~~g~~i~~~t~V~~I 878 (1183)
.+..+....+.++++++|++..+. .....|++.++..+.+|.|.++..+|+.++.+++|++|++++.|++|
T Consensus 148 -----~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i 222 (546)
T 1kdg_A 148 -----RYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNV 222 (546)
T ss_dssp -----CCSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEE
T ss_pred -----ccCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEE
Confidence 233466778888999999875432 23456777777888899999999999999888899999999999999
Q ss_pred EEcCCCCeEEEEEEee--CCe--EEEEEeccEEEEccCccCcHHHHHHcCCCCccchhhc------CCCcc-----ccCC
Q psy8892 879 LIDPITKRTYGVEFSK--NRK--SYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEEL------NIPVI-----QDLK 943 (1183)
Q Consensus 879 ~~~~~~gra~GV~~~~--~~~--~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~~l~~~------gi~v~-----~dlp 943 (1183)
++++ ++++||++.+ +++ ..++++.|+||||||+++||+||++|||||+++|+++ ||+|+ +|||
T Consensus 223 ~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp 300 (546)
T 1kdg_A 223 VRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP 300 (546)
T ss_dssp EEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC
T ss_pred EEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC
Confidence 9986 7999999975 343 3456666999999999999999999999999999999 59885 8999
Q ss_pred CCcccccccccceEEEEEcCcc-cc-cc-c--ccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCCCCeeEee
Q psy8892 944 VGYNMQDHLSMAGLVFLVNSSV-TI-VE-S--KYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVF 1018 (1183)
Q Consensus 944 VG~nl~dh~~~~~~~~~~~~~~-~~-~~-~--~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~ 1018 (1183)
||+|||||+.+ .+.|.. +.. .. .. . .........+|+..++||++. +.. ...|+..........++++..+
T Consensus 301 VG~nL~DH~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 376 (546)
T 1kdg_A 301 VGMNAQDNPSI-NLVFTH-PSIDAYENWADVWSNPRPADAAQYLANQSGVFAG-ASP-KLNFWRAYSGSDGFTRYAQGTV 376 (546)
T ss_dssp TTTTBBCCCCE-EEEEEC-TTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGS-CSC-CEEEEEEEECTTSCEEEEEEEE
T ss_pred cccCcccCcce-eEEEec-CCcccccchhhhhcchhHHHHHHHHHcCCccccc-CCc-ceEEEEccCCCCcchhhhhhee
Confidence 99999999986 666763 221 11 10 0 001234567888889999873 222 2346553221110012333333
Q ss_pred cCCcccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccc-cCCCcccCcceEEEecCCCCCCCCeeecCCCCC
Q psy8892 1019 GPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRP-RSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSD 1097 (1183)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P-~SrG~~~~~~~~V~l~s~dp~~~P~I~~~yls~ 1097 (1183)
.+..... . + ..+....+.+++.+++++| +||| +|+|+|+| ..|.|+++|+++
T Consensus 377 ~~~~~~~-~--------~---------~~~~~~~~~~~~~~~~~~p~~srG-------~v~L~s~~--~~~~i~~~y~~~ 429 (546)
T 1kdg_A 377 RPGAASV-N--------S---------SLPYNASQIFTITVYLSTGIQSRG-------RIGIDAAL--RGTVLTPPWLVN 429 (546)
T ss_dssp EESCSCC-C--------C---------SSCCCGGGEEEEEEEECTTCCCCB-------EEEECTTC--CEEEEECCTTCS
T ss_pred ccccccc-c--------c---------ccccCCCCeEEEEeeecCCCCCCc-------eEecCCCC--CCCcccccccCC
Confidence 2211000 0 0 0011223578888899999 9999 99999998 678899999999
Q ss_pred hhhHHHHHHHHHHHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCcEEEc
Q psy8892 1098 SRDLDVLIEAIKMAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAVDRRGEIML 1177 (1183)
Q Consensus 1098 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~~~~~~Vvd 1177 (1183)
|.|++.|++++|.+++++++.+... ...|++ ..++|++.+++++...+.||++|||+||+++ ...|||
T Consensus 430 ~~D~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~~VVD 497 (546)
T 1kdg_A 430 PVDKTVLLQALHDVVSNIGSIPGLT-------MITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSP-QSAVVD 497 (546)
T ss_dssp HHHHHHHHHHHHHHTTTGGGSTTCE-------EEESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TTCSBC
T ss_pred chHHHHHHHHHHHHHHHhcCCCccc-------ccCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCC-CCeeEC
Confidence 9999999999999999998754211 124553 3689999999999999999999999999764 467787
Q ss_pred CC
Q psy8892 1178 SS 1179 (1183)
Q Consensus 1178 ~~ 1179 (1183)
+.
T Consensus 498 ~~ 499 (546)
T 1kdg_A 498 SN 499 (546)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 16
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.6e-49 Score=487.04 Aligned_cols=478 Identities=21% Similarity=0.268 Sum_probs=310.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCCCc--cc-ccccccccCCCCCCCc--ccc-cCCCcccCCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD--EI-PLFVSHIVSSDFNWGY--TTE-KTDGICKGMKN 119 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~~~--~~-p~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 119 (1183)
.+|||||||||++|+++|.+|+++ |++|+|||+|+...... .. +..........+.+.. ... ..... ....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~ 82 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNP--FWWC 82 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCC--TTBC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCc--cccc
Confidence 579999999999999999999998 99999999997532100 00 0000000000000000 000 00000 0001
Q ss_pred CeeccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHH---HHHcCCCCCCcc
Q psy8892 120 QRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDG---WAALGNIGWSFE 196 (1183)
Q Consensus 120 ~~~~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~---w~~~~~~~w~~~ 196 (1183)
....+++|+++||+|.+|++.+. |+.+.||+. |+ .+|+|+
T Consensus 83 ~~~~~~~g~~lGGsS~in~~~~~---------------------------------r~~~~d~d~~~~W~----~~w~~~ 125 (546)
T 1kdg_A 83 KDITVFAGCLVGGGTSVNGALYW---------------------------------YPNDGDFSSSVGWP----SSWTNH 125 (546)
T ss_dssp TTBSSCCBCSTTGGGGTSCCBCC---------------------------------CCCGGGGCGGGTCC----GGGSCC
T ss_pred cccccccceeecccccccceEEe---------------------------------cCChHHhcCcccCc----cccCcc
Confidence 12345566666666666666666 777777776 63 467777
Q ss_pred chHHHHHHhccCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHHcCCCCCCCC-C--CCCcceeeeecccCCCc
Q psy8892 197 EVLPYFKKSEDMKTAELKSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIVDPS-E--PNAIGFSYVLANTGNGE 273 (1183)
Q Consensus 197 ~l~~~~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~--~~~~g~~~~~~~~~~g~ 273 (1183)
+ +||++.|...... ..+...|+ .+..+....+.++++++|++..+.+ . ....+++.+...+..+.
T Consensus 126 ~--p~~~k~e~~~~~~----~~~~~~g~------~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 193 (546)
T 1kdg_A 126 A--PYTSKLSSRLPST----DHPSTDGQ------RYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGK 193 (546)
T ss_dssp H--HHHHHHHHHSCCB----SCCSTTSC------CCSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTE
T ss_pred c--HHHHHHHhcCCCC----ccCCCCCC------ccCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCc
Confidence 7 9999998754211 11222222 1234666778888899998732221 1 13456667777778899
Q ss_pred ccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCe--EEEEEeCcEEEEcCCCCCChHHHHHh
Q psy8892 274 RYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQ--RHTVRARKEVILSAGALNSPQLLMLS 349 (1183)
Q Consensus 274 r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~--~~~i~A~k~VILAAGai~sp~LLl~S 349 (1183)
|+++..+++.++.+++|++|++++.|++|+++++ +++||++.+ +++ +.++.+.++||||||+++||+||++|
T Consensus 194 R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~----~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~s 269 (546)
T 1kdg_A 194 RAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS----QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQS 269 (546)
T ss_dssp ECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT----EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC----EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHc
Confidence 9999999999888888999999999999999876 999999876 343 33565667899999999999999999
Q ss_pred CCCChhhhhhc------CCCce-----ecCccccccccCcccceEEEEEcCch-hhhhHhhhcCCCCCcccccccccccc
Q psy8892 350 GIGPRDHLEEM------NIPVI-----QDLKVGYNLQDHVSMAGLVFLVNDSV-TIVELLMLSGIGPRDHLEEMNIPVIE 417 (1183)
Q Consensus 350 Gig~~~~l~~~------gi~~~-----~~~pVG~~l~dh~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1183)
||||+++|+++ ||+++ +|+|||+|||||+.+.+ .+. .... ......
T Consensus 270 Gig~~~~L~~~gn~s~~GI~v~~~~~~~dlpVG~nL~DH~~~~~-~~~-~~~~~~~~~~~-------------------- 327 (546)
T 1kdg_A 270 GIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMNAQDNPSINL-VFT-HPSIDAYENWA-------------------- 327 (546)
T ss_dssp TBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTBBCCCCEEE-EEE-CTTCCCGGGGT--------------------
T ss_pred CCCcHHHHHHhhccccCCcccccccccccCCcccCcccCcceeE-EEe-cCCcccccchh--------------------
Confidence 99999999999 59885 89999999999986654 454 2111 000000
Q ss_pred ccccccccccccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccCCCCCCCCcEeEeecC
Q psy8892 418 DLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGP 497 (1183)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1183)
..+ .+ . ......+|...++|+++... ....|+..........+.++..+.+
T Consensus 328 ---~~~--~~-~---------------------~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (546)
T 1kdg_A 328 ---DVW--SN-P---------------------RPADAAQYLANQSGVFAGAS--PKLNFWRAYSGSDGFTRYAQGTVRP 378 (546)
T ss_dssp ---TTT--TS-C---------------------CHHHHHHHHHHSCSGGGSCS--CCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred ---hhh--cc-h---------------------hHHHHHHHHHcCCcccccCC--cceEEEEccCCCCcchhhhhheecc
Confidence 000 00 0 00123567777888876532 1223544321111111233332322
Q ss_pred CccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeeccc-CCceEEEeeCCCCCCCCeeeCCCCCChhhHHHHHH
Q psy8892 498 GALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRP-FSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIE 576 (1183)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~srG~v~l~s~d~~~~P~i~~~y~~~~~D~~~~~~ 576 (1183)
..... .+ ..+......+++...+++| .|||+|+|+++| ..|.|+++|+.+|.|++.|++
T Consensus 379 ~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~ 438 (546)
T 1kdg_A 379 GAASV-NS-----------------SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQ 438 (546)
T ss_dssp SCSCC-CC-----------------SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHH
T ss_pred ccccc-cc-----------------ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHH
Confidence 11000 00 0011122567888888998 999999999988 567899999999999999999
Q ss_pred HHHHHHHhhhccccccccccCCC--CccchHHHHHHh-------ccccc-cc----ccccCCcceeeecccccccccccc
Q psy8892 577 AIKMCALFSLVCHLLVLSVAHAQ--SQLFRTECALFS-------LVCHL-LL----LSVAHAQSQLFRTFINMVSKDAIL 642 (1183)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~-------~~~t~-~g----~~VVD~~~rV~~gv~nLrV~D~s~ 642 (1183)
+++++++++.+..... ...|+ .....+.++++. .++|| || +||||++|||| |++||||||+||
T Consensus 439 ~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~-Gv~nLrVvDaSv 515 (546)
T 1kdg_A 439 ALHDVVSNIGSIPGLT--MITPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVF-GTNNLFIVDAGI 515 (546)
T ss_dssp HHHHHTTTGGGSTTCE--EEESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBT-TCSSEEECSGGG
T ss_pred HHHHHHHHhcCCCccc--ccCCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEc-cCCCcEEeEecc
Confidence 9999999976543111 01122 222345666653 34444 66 68999999999 999999999999
Q ss_pred ccccccccccc
Q psy8892 643 TPSNIVQDTKI 653 (1183)
Q Consensus 643 ~p~~~~~np~~ 653 (1183)
||++++.||+.
T Consensus 516 ~P~~~~~np~~ 526 (546)
T 1kdg_A 516 IPHLPTGNPQG 526 (546)
T ss_dssp CSSCCSSCSHH
T ss_pred cCCCCCccHHH
Confidence 99999999997
No 17
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.5e-47 Score=459.19 Aligned_cols=429 Identities=16% Similarity=0.166 Sum_probs=292.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCC-C--cccccccccccCCCCCCCcccccCC-----------
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII-L--DEIPLFVSHIVSSDFNWGYTTEKTD----------- 111 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~-~--~~~p~~~~~~~~~~~~~~~~~~~~~----------- 111 (1183)
.+||+||||+|++|+++|.+|++. |++|+|||+|..... . ...+... .......+|.+.+.++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 469999999999999999999997 999999999984321 1 1122111 11233467888776652
Q ss_pred ---CcccC----CCCCeeccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcHHH
Q psy8892 112 ---GICKG----MKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDYDG 184 (1183)
Q Consensus 112 ---~~~~~----~~~~~~~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~~~ 184 (1183)
....+ ..++.+.|++|+++||+|.+|++.|. |+.+.||+.
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~---------------------------------R~~~~Dfd~ 128 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAV---------------------------------EPKRSYFEE 128 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCC---------------------------------CCCHHHHHH
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEE---------------------------------eCCHHHHHH
Confidence 01111 14566777778888887777777777 999999999
Q ss_pred HHHcCCCCCCccchH-HHHHHhccCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHHcCC-----C-CCCCC--
Q psy8892 185 WAALGNIGWSFEEVL-PYFKKSEDMKTAELKSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGY-----D-IVDPS-- 255 (1183)
Q Consensus 185 w~~~~~~~w~~~~l~-~~~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~-----~-~~~~~-- 255 (1183)
|. .+|.|++++ |||+++|+++........++ .... ..+..+.+.++++++|+ + ..+.+
T Consensus 129 w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~--------~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~ 195 (504)
T 1n4w_A 129 IL----PRVDSSEMYDRYFPRANSMLRVNHIDTKWF--------EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYM 195 (504)
T ss_dssp HC----TTSCHHHHHHTHHHHHHHHHTCBCCCHHHH--------HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHH
T ss_pred hc----cccchhhhhhHHHHHHHHHhCCCCCCcccc--------cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCcc
Confidence 96 568999999 99999999764322111111 0000 13567888899999999 3 22222
Q ss_pred -------CCCCcceeeeecccCCCcccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-CC---eE
Q psy8892 256 -------EPNAIGFSYVLANTGNGERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NK---QR 324 (1183)
Q Consensus 256 -------~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-~g---~~ 324 (1183)
...+..++.|...|..| |+++..+++.++.+++|++|++++.|++|++++++. +++||++.+ ++ +.
T Consensus 196 ~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~--~~~gV~~~~~~g~~~~~ 272 (504)
T 1n4w_A 196 QREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGG--YALTVEQKDTDGKLLAT 272 (504)
T ss_dssp HHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSS--EEEEEEEECTTCCEEEE
T ss_pred ccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCC--EEEEEEEeCCCCcccee
Confidence 12345566777788999 999999999888878889999999999999986322 899999985 45 56
Q ss_pred EEEEeCcEEEEcCCCCCChHHHHHhC-CCChhhhhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCC
Q psy8892 325 HTVRARKEVILSAGALNSPQLLMLSG-IGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGI 402 (1183)
Q Consensus 325 ~~i~A~k~VILAAGai~sp~LLl~SG-ig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1183)
.+++|+ +||||||+|+||+||++|| || +|+++ ++ ||+||+||+.+.+ .+.... ..
T Consensus 273 ~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~--~~~VG~nl~dh~~~~~-~~~~~~-~~---------- 329 (504)
T 1n4w_A 273 KEISCR-YLFLGAGSLGSTELLVRARDTG--------TLPNL--NSEVGAGWGPNGNIMT-ARANHM-WN---------- 329 (504)
T ss_dssp EEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTTC--CTTTTCCBBCTTCEEE-EEECCT-TC----------
T ss_pred EEEeeC-EEEEccCCCCCHHHHHhccccC--------CCCCC--ChhhccccccCCccee-eeccCC-CC----------
Confidence 789997 7999999999999999999 87 56655 45 9999999975443 221110 00
Q ss_pred CCCccccccccccccccccccccccccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEeccC
Q psy8892 403 GPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSKF 482 (1183)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 482 (1183)
..|++.. ......+....
T Consensus 330 -----------------------------------------------------------~~~~~~~--~~~~~~~~~~~- 347 (504)
T 1n4w_A 330 -----------------------------------------------------------PTGAHQS--SIPALGIDAWD- 347 (504)
T ss_dssp -----------------------------------------------------------CCCSCCC--SSCCEEEEECC-
T ss_pred -----------------------------------------------------------cccCcCC--CccEEEEeccC-
Confidence 0011110 01112232221
Q ss_pred CCCCCCCcEeEeecCCccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCeeeC
Q psy8892 483 ENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYP 562 (1183)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i~~ 562 (1183)
. ...|++++.+. +.. . + . ..+.+...+.+|.|||+|+|+++|| .|++
T Consensus 348 -~-~~~~~~~~~~~---~~~--~-----------------~----~-~~~~~~~~~~~p~srG~V~L~s~~~----~i~~ 394 (504)
T 1n4w_A 348 -N-SDSSVFAEIAP---MPA--G-----------------L----E-TWVSLYLAITKNPQRGTFVYDAATD----RAKL 394 (504)
T ss_dssp -S-STTCEEEEEEC---CCC--S-----------------S----C-CCEEEEEEEECCCCCBCEEEETTTT----EEEE
T ss_pred -C-CCCceEEEecc---CCh--H-----------------H----H-hhhhhheeeeccCCCcEEEecCCCC----ceEe
Confidence 1 12344443321 000 0 0 0 2456667778999999999999875 6999
Q ss_pred CCCCChhhHHHHHHHHH-HHHHhhhccccccccccCCCCcc--chHHH----HHHhccccc-ccccccCCcceeeecccc
Q psy8892 563 NYLSDSRDLDVLIEAIK-MCALFSLVCHLLVLSVAHAQSQL--FRTEC----ALFSLVCHL-LLLSVAHAQSQLFRTFIN 634 (1183)
Q Consensus 563 ~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~--~~~~~----~~~~~~~t~-~g~~VVD~~~rV~~gv~n 634 (1183)
+|+.++ | +.++++++ ++++++...... ++.+. ..+++ ...|.++|+ || +|||++|||| |++|
T Consensus 395 ~~~~~~-D-~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~H~~GTcrMG-~VVD~~~rV~-Gv~n 464 (504)
T 1n4w_A 395 NWTRDQ-N-APAVNAAKALFDRINKANGTI------YRYDLFGTQLKAFADDFCYHPLGGCVLG-KATDDYGRVA-GYKN 464 (504)
T ss_dssp CCCGGG-G-HHHHHHHHHHHHHHHHHHTCC------BCCSSSSSSCCSEECSEESSCBCSSCTT-TTBCTTSBBT-TCSS
T ss_pred ccCCCc-C-HHHHHHHHHHHHHHHhccCCC------cCCchhhhhhhhhccCccccccCCceee-eEECCCCeEe-ccCC
Confidence 999999 9 78999999 889987554321 11110 00000 111334444 55 8999999999 9999
Q ss_pred ccccccccccccccccccc
Q psy8892 635 MVSKDAILTPSNIVQDTKI 653 (1183)
Q Consensus 635 LrV~D~s~~p~~~~~np~~ 653 (1183)
|||||+||||++++.||++
T Consensus 465 LrVvDaSv~P~~~~~np~~ 483 (504)
T 1n4w_A 465 LYVTDGSLIPGSVGVNPFV 483 (504)
T ss_dssp EEECSGGGSCSCCSSCSHH
T ss_pred eEEeeccccCCCCCcChHH
Confidence 9999999999999999998
No 18
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=2.9e-45 Score=443.21 Aligned_cols=432 Identities=16% Similarity=0.155 Sum_probs=286.3
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCCCccccc---ccccc-cCCCCCCCcccccCCCc------
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPL---FVSHI-VSSDFNWGYTTEKTDGI------ 113 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~~~~~p~---~~~~~-~~~~~~~~~~~~~~~~~------ 113 (1183)
+..+||+||||+|++|+++|.+|++. |.+|+|||+|..... ..|. ..... .....+|.+.+.++...
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 45679999999999999999999997 999999999975321 1221 11111 13357888887765210
Q ss_pred -----ccCC------CCCeeccCCCCcccccccccceEEEeccCCCCCCCCCCCCCCCcccCCcccccccccCCCChhcH
Q psy8892 114 -----CKGM------KNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMGGTSVTNYMVYTRGVPHDY 182 (1183)
Q Consensus 114 -----~~~~------~~~~~~~~~g~~lGGss~~n~~~~~r~~~~~~~~~~~~~~~~~~~vGG~s~~w~~~~~r~~~~d~ 182 (1183)
.... .++.+.|++|+++||+|.+|++.|. |+.+.||
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~---------------------------------R~~~~df 131 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAV---------------------------------TPKRNYF 131 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCC---------------------------------CCCHHHH
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEe---------------------------------eCCHHHH
Confidence 0111 3455666666766666666666666 9999999
Q ss_pred HHHHHcCCCCCCccchH-HHHHHhccCCCCCCCCCCCCCCCcceeecCCCCCchHHHHHHHHHHHcCC-----C-CCCCC
Q psy8892 183 DGWAALGNIGWSFEEVL-PYFKKSEDMKTAELKSSPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGY-----D-IVDPS 255 (1183)
Q Consensus 183 ~~w~~~~~~~w~~~~l~-~~~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~-----~-~~~~~ 255 (1183)
+.|. .+|.|++++ |||+++|+++.+...... .. . .....+..+.+.++++++|+ + ..+.+
T Consensus 132 d~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~~------~~--~-~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n 198 (507)
T 1coy_A 132 EEIL----PSVDSNEMYNKYFPRANTGLGVNNIDQA------WF--E-STEWYKFARTGRKTAQRSGFTTAFVPNVYDFE 198 (507)
T ss_dssp HHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCHH------HH--H-HCGGGHHHHHHHHHHHHTTCCEEECCBSBCHH
T ss_pred HhhC----CccchhcchhHHHHHHHHHhCCCCCCCc------cc--c-ccccchHHHHHHHHHHHcCCCCccCCcccccC
Confidence 9996 368999999 999999998653211000 00 0 00024567788899999999 4 22222
Q ss_pred ---------CCCCcceeeeecccCCCcccchhhhhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-CC---
Q psy8892 256 ---------EPNAIGFSYVLANTGNGERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NK--- 322 (1183)
Q Consensus 256 ---------~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-~g--- 322 (1183)
...+..|+.|...|..| |+++..+|+.++.+++|++|++++.|++|++++++. +++||++.+ ++
T Consensus 199 ~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~--~~~gV~~~~~~g~~~ 275 (507)
T 1coy_A 199 YMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSG--YSVTMEQIDEQGNVV 275 (507)
T ss_dssp HHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSS--EEEEEEEECTTSCEE
T ss_pred cccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCC--EEEEEEEeCCCCccc
Confidence 12344667777788999 999999999988888899999999999999986322 799999986 45
Q ss_pred eEEEEEeCcEEEEcCCCCCChHHHHHhC-CCChhhhhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhc
Q psy8892 323 QRHTVRARKEVILSAGALNSPQLLMLSG-IGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLS 400 (1183)
Q Consensus 323 ~~~~i~A~k~VILAAGai~sp~LLl~SG-ig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~ 400 (1183)
+..+++|+ +||||||+|+||+||++|| ||. +| ...+ ||+||++|+.... .. ....
T Consensus 276 ~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG~--------lp--nl~d~VG~~l~~h~~~~~-~~-~~~~---------- 332 (507)
T 1coy_A 276 ATKVVTAD-RVFFAAGSVGTSKLLVSMKAQGH--------LP--NLSSQVGEGWGNNGNIMV-GR-ANHM---------- 332 (507)
T ss_dssp EEEEEEEE-EEEECSHHHHHHHHHHHHHHTTS--------ST--TSCTTTTCCBBCTTEEEE-EE-ECCT----------
T ss_pred ccEEEEeC-EEEEccCccCCHHHHHhcccCCC--------CC--ccChhhCCccccCCcccc-cc-cccc----------
Confidence 36789997 7999999999999999999 882 33 1134 9999999974322 11 0000
Q ss_pred CCCCCccccccccccccccccccccccccchhchhhhcccchhhhhhcccchhhHHHHHHhCCCCCcCcccccEEEEEec
Q psy8892 401 GIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISS 480 (1183)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 480 (1183)
+ ...|++.... ....+...
T Consensus 333 ---------------------------------------------------------~--~~~~~~~~~~--~~~~~~~~ 351 (507)
T 1coy_A 333 ---------------------------------------------------------W--DATGSKQATI--PTMGIDNW 351 (507)
T ss_dssp ---------------------------------------------------------T--SCCCSCCCSS--CCEEEECT
T ss_pred ---------------------------------------------------------c--ccccccCCCc--ceEEEecc
Confidence 0 0011111100 01111111
Q ss_pred cCCCCCCCCcEeEeecCCccCCCCCcccccccccchhhhhcccCCCCCCCeEEEEeeecccCCceEEEeeCCCCCCCCee
Q psy8892 481 KFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKF 560 (1183)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~v~l~s~d~~~~P~i 560 (1183)
.. ...|++++.+ + +. .. + . ..+.++..+.+|.|||+|+|+++|| .|
T Consensus 352 --~~-~~~~~~~~~~-~--~~--~~-----------------~----~-~~~~~~~~~~~p~s~G~V~L~s~~~----~i 397 (507)
T 1coy_A 352 --AD-PTAPIFAEIA-P--LP--AG-----------------L----E-TYVSLYLAITKNPERARFQFNSGTG----KV 397 (507)
T ss_dssp --TC-TTSCEEEEEE-C--CC--CS-----------------S----C-CCEEEEEEEECCCCCBCEEEETTTT----EE
T ss_pred --CC-CCCCcEEEec-c--CC--HH-----------------H----h-hheeeeEEEeeeCCCcEEEEccCCC----ce
Confidence 11 1234443332 1 00 00 0 0 2455566778999999999998876 89
Q ss_pred eCCCCCChhhHHHHHHHHH-HHHHhhhccccccccccCCCCccchHHHH----HHhccccc-ccccccCCcceeeecccc
Q psy8892 561 YPNYLSDSRDLDVLIEAIK-MCALFSLVCHLLVLSVAHAQSQLFRTECA----LFSLVCHL-LLLSVAHAQSQLFRTFIN 634 (1183)
Q Consensus 561 ~~~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~t~-~g~~VVD~~~rV~~gv~n 634 (1183)
+++|+.++ | +.++++++ ++++++.....+...+.. ... . +++ ..|.++|+ || +|||++|||| |++|
T Consensus 398 ~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~d--~-~~~~~~~~~H~~GTcrMG-~VVD~~~rV~-Gv~n 469 (507)
T 1coy_A 398 DLTWAQSQ-N-QKGIDMAKKVFDKINQKEGTIYRTDLF-GVY--Y-KTWGDDFTYHPLGGVLLN-KATDNFGRLP-EYPG 469 (507)
T ss_dssp EECCCGGG-G-HHHHHHHHHHHHHHHHHHTCCBCSSCC---C--C-CSSBCSEESCCBCSSCTT-TTSCTTSBCT-TSTT
T ss_pred eeccCCCC-c-HHHHHHHHHHHHHHHhhcCCcccCccc-ccc--h-hhhcccccccccCCcchh-heECCCCeEe-ccCC
Confidence 99999999 8 56788877 899997554321111100 000 0 111 11233333 44 6999999999 9999
Q ss_pred ccccccccccccccccccc
Q psy8892 635 MVSKDAILTPSNIVQDTKI 653 (1183)
Q Consensus 635 LrV~D~s~~p~~~~~np~~ 653 (1183)
|||||+||||++++.||++
T Consensus 470 LrVvDaSv~P~~~~~Np~~ 488 (507)
T 1coy_A 470 LYVVDGSLVPGNVGVNPFV 488 (507)
T ss_dssp EEECSGGGSCSCCSSCSHH
T ss_pred eEEeechhccCCCCcChHH
Confidence 9999999999999999998
No 19
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=1.7e-45 Score=445.39 Aligned_cols=403 Identities=16% Similarity=0.167 Sum_probs=286.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC-C--cccccccccccCCCCccCccccCcc-----------
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL-L--TDVPLFVSYMVDTDFNWGYKTEKDE----------- 721 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~-~--~~~p~~~~~~~~~~~~w~~~~~~~~----------- 721 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|||+|+.... . ...+... ......++|.|.+.++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 46999999999999999999999 6999999999984321 1 1222111 12234578999887761
Q ss_pred ---ccccC----CCCCeeeccccceecCcccccceeEeeCCccccchhhccCCCCCCccchH-HHHHHhhcccCCCCCCC
Q psy8892 722 ---RFCRG----MSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVL-PYFKKSEDISVSRLKGS 793 (1183)
Q Consensus 722 ---~~~~~----~~~~~~~~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~gw~~~~l~-py~~k~e~~~~~~~~~~ 793 (1183)
..+.+ ..++.+.|++|+++||+|.+|+|+|.|+.+.||+.|. ++|.|++++ |||+|+|++.......
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~- 156 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHID- 156 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC-
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCC-
Confidence 11111 1577889999999999999999999999999999996 579999999 9999999986532100
Q ss_pred CCCCCCCccccccCCCCChHHHHHHHHHHHCCC-----CCC-CC----------CCCCceeeeecccccCCccchHHHhh
Q psy8892 794 PYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGY-----DQV-DH----------CENPIGFSYVLANKIRGARQSASKAF 857 (1183)
Q Consensus 794 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~G~-----~~~-d~----------~~~~~g~~~~~~~~~~g~r~~~~~~~ 857 (1183)
.... ...+ ..+..+.|.++++++|+ +.. |+ ...+..++.|...|.+| |.++..+|
T Consensus 157 ------~~~~-~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~ 227 (504)
T 1n4w_A 157 ------TKWF-EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTY 227 (504)
T ss_dssp ------HHHH-HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTH
T ss_pred ------cccc-cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHH
Confidence 0000 0001 24577889999999999 432 22 11234445566677889 99999999
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CC---eEEEEEeccEEEEccCccCcHHHHHHcC-CCCccchh
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NR---KSYTVKCRKEVILSAGTLNSPQLLMLSG-VGPRPHLE 932 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~---~~~~i~A~k~VILAaGa~~tp~lL~~SG-IG~~~~l~ 932 (1183)
|.++.++.|++|++++.|++|++++++++++||++.+ ++ +..+|+| ++||||||+|+||+||++|| ||
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A-~~VIlaaG~~~s~~lL~~Sg~ig------ 300 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISC-RYLFLGAGSLGSTELLVRARDTG------ 300 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEE-EEEEECSHHHHHHHHHHHHHHTT------
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEee-CEEEEccCCCCCHHHHHhccccC------
Confidence 9888888899999999999999986435899999974 45 5678999 59999999999999999999 98
Q ss_pred hcCCCccccCC-CCcccccccccceEEEEEcCcccccccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCCCCC
Q psy8892 933 ELNIPVIQDLK-VGYNMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAEDPNH 1011 (1183)
Q Consensus 933 ~~gi~v~~dlp-VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1183)
+|+++ ++ ||+|||||+.+ .+.+.... . ...|++. +......|.+.... +.
T Consensus 301 --~i~~~--~~~VG~nl~dh~~~-~~~~~~~~-~------------------~~~~~~~--~~~~~~~~~~~~~~---~~ 351 (504)
T 1n4w_A 301 --TLPNL--NSEVGAGWGPNGNI-MTARANHM-W------------------NPTGAHQ--SSIPALGIDAWDNS---DS 351 (504)
T ss_dssp --SSTTC--CTTTTCCBBCTTCE-EEEEECCT-T------------------CCCCSCC--CSSCCEEEEECCSS---TT
T ss_pred --CCCCC--ChhhccccccCCcc-eeeeccCC-C------------------CcccCcC--CCccEEEEeccCCC---CC
Confidence 67766 45 99999999975 33332111 0 0124443 22334455554321 14
Q ss_pred CCeeEeecCCcccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCCeee
Q psy8892 1012 PDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSPKFY 1091 (1183)
Q Consensus 1012 pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P~I~ 1091 (1183)
|++++++. .. . ... ..+++..++++|.||| +|+|+|+|| .|+
T Consensus 352 ~~~~~~~~-~~------~------------------~~~--~~~~~~~~~~~p~srG-------~V~L~s~~~----~i~ 393 (504)
T 1n4w_A 352 SVFAEIAP-MP------A------------------GLE--TWVSLYLAITKNPQRG-------TFVYDAATD----RAK 393 (504)
T ss_dssp CEEEEEEC-CC------C------------------SSC--CCEEEEEEEECCCCCB-------CEEEETTTT----EEE
T ss_pred ceEEEecc-CC------h------------------HHH--hhhhhheeeeccCCCc-------EEEecCCCC----ceE
Confidence 66554431 00 0 001 3466777889999999 999999875 799
Q ss_pred cCCCCChhhHHHHHHHHH-HHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCccccccccccc
Q psy8892 1092 PNYLSDSRDLDVLIEAIK-MAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADA 1168 (1183)
Q Consensus 1092 ~~yls~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~ 1168 (1183)
++|+.++ | +.|+++++ ++++|+++.++ +|+.+.+ .++ |+++ ...+.+|++|||+||.
T Consensus 394 ~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~---~~~-~~~~---~~~~~~H~~GTcrMG~ 451 (504)
T 1n4w_A 394 LNWTRDQ-N-APAVNAAKALFDRINKANGT-----------IYRYDLF---GTQ-LKAF---ADDFCYHPLGGCVLGK 451 (504)
T ss_dssp ECCCGGG-G-HHHHHHHHHHHHHHHHHHTC-----------CBCCSSS---SSS-CCSE---ECSEESSCBCSSCTTT
T ss_pred eccCCCc-C-HHHHHHHHHHHHHHHhccCC-----------CcCCchh---hhh-hhhh---ccCccccccCCceeee
Confidence 9999999 9 88999999 99999987552 1221100 000 2222 5678999999999993
No 20
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.5e-43 Score=428.34 Aligned_cols=401 Identities=16% Similarity=0.149 Sum_probs=281.9
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCCCccccc---ccccc-cCCCCccCccccCccc--------
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPL---FVSYM-VDTDFNWGYKTEKDER-------- 722 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~-------- 722 (1183)
..+||+||||+|++|+++|.+|++ .|.+|+|||+|..... ..|. +.... ....++|.|.+.+|..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 457999999999999999999999 6999999999975321 1221 11111 2346899999887611
Q ss_pred ---cccCC------CCCeeeccccceecCcccccceeEeeCCccccchhhccCCCCCCccchH-HHHHHhhcccCCCCCC
Q psy8892 723 ---FCRGM------SDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSYRDVL-PYFKKSEDISVSRLKG 792 (1183)
Q Consensus 723 ---~~~~~------~~~~~~~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~gw~~~~l~-py~~k~e~~~~~~~~~ 792 (1183)
....+ .++.+.|++|+++||+|.+|+|++.|+.+.||+.|. ++|.|++|+ |||+|+|++..+...
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~- 160 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNI- 160 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCC-
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCC-
Confidence 01112 567889999999999999999999999999999996 478999999 999999998754210
Q ss_pred CCCCCCCCccccccCCC-CChHHHHHHHHHHHCCC-----CCC-CC----------CCCCceeeeecccccCCccchHHH
Q psy8892 793 SPYHGIGGYLKVEQTSW-RTPLSAAFLEAGSELGY-----DQV-DH----------CENPIGFSYVLANKIRGARQSASK 855 (1183)
Q Consensus 793 ~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~G~-----~~~-d~----------~~~~~g~~~~~~~~~~g~r~~~~~ 855 (1183)
..... +.. ..+..+.|.++++++|+ +.. |+ ...+..++.|..+|.+| |.++..
T Consensus 161 ------~~~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~ 230 (507)
T 1coy_A 161 ------DQAWF---ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDK 230 (507)
T ss_dssp ------CHHHH---HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTT
T ss_pred ------CCccc---cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHH
Confidence 00000 111 24577889999999999 443 22 11233445566677889 999999
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CC---eEEEEEeccEEEEccCccCcHHHHHHcC-CCCccc
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NR---KSYTVKCRKEVILSAGTLNSPQLLMLSG-VGPRPH 930 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~---~~~~i~A~k~VILAaGa~~tp~lL~~SG-IG~~~~ 930 (1183)
+||.++.++.|++|++++.|++|++++++++++||++.. ++ +.++|+| ++||||||+|+||+||++|| ||
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A-~~VIlaaGa~~sp~lL~~Sg~iG---- 305 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTA-DRVFFAAGSVGTSKLLVSMKAQG---- 305 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEE-EEEEECSHHHHHHHHHHHHHHTT----
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEe-CEEEEccCccCCHHHHHhcccCC----
Confidence 999988888899999999999999986424899999975 44 4678999 59999999999999999999 98
Q ss_pred hhhcCCCccccC-C-CCcccccccccceEEEEEcCcccccccccCChHHHHHHHhcCCCCCCCccccceEEEeecCCCCC
Q psy8892 931 LEELNIPVIQDL-K-VGYNMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAED 1008 (1183)
Q Consensus 931 l~~~gi~v~~dl-p-VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 1008 (1183)
++| ++ + ||+||+||+.. ...+.. . +| ...|++.. ......+......
T Consensus 306 ----~lp---nl~d~VG~~l~~h~~~-~~~~~~-----------~------~~--~~~~~~~~--~~~~~~~~~~~~~-- 354 (507)
T 1coy_A 306 ----HLP---NLSSQVGEGWGNNGNI-MVGRAN-----------H------MW--DATGSKQA--TIPTMGIDNWADP-- 354 (507)
T ss_dssp ----SST---TSCTTTTCCBBCTTEE-EEEEEC-----------C------TT--SCCCSCCC--SSCCEEEECTTCT--
T ss_pred ----CCC---ccChhhCCccccCCcc-cccccc-----------c------cc--ccccccCC--CcceEEEeccCCC--
Confidence 244 43 4 99999999863 221110 0 01 23355442 1112222222211
Q ss_pred CCCCCeeEeecCCcccCCCCCcchhhcccccccccccccCCCCCCeEEEEEeeccccCCCcccCcceEEEecCCCCCCCC
Q psy8892 1009 PNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRGFVRLSRGFVKLRSSNPFDSP 1088 (1183)
Q Consensus 1009 ~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~~~~~~~~V~l~s~dp~~~P 1088 (1183)
+.|++++.. +. .. .. ...+++..++++|.||| +|+|+|+||
T Consensus 355 -~~~~~~~~~-~~--~~----------------------~~--~~~~~~~~~~~~p~s~G-------~V~L~s~~~---- 395 (507)
T 1coy_A 355 -TAPIFAEIA-PL--PA----------------------GL--ETYVSLYLAITKNPERA-------RFQFNSGTG---- 395 (507)
T ss_dssp -TSCEEEEEE-CC--CC----------------------SS--CCCEEEEEEEECCCCCB-------CEEEETTTT----
T ss_pred -CCCcEEEec-cC--CH----------------------HH--hhheeeeEEEeeeCCCc-------EEEEccCCC----
Confidence 145655443 11 00 00 13456667788999999 999999876
Q ss_pred eeecCCCCChhhHHHHHHHHH-HHHHHHcChhhhHhhhccCCccCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccc
Q psy8892 1089 KFYPNYLSDSRDLDVLIEAIK-MAVELSETRAMQKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIAD 1167 (1183)
Q Consensus 1089 ~I~~~yls~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg 1167 (1183)
.|+++|++++ | +.|+++++ .+++++++.+. + .. .+. ..+|+ ++| ...+.+|++|||+||
T Consensus 396 ~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~----~~--~~~-----~~~d~--~~~---~~~~~~H~~GTcrMG 455 (507)
T 1coy_A 396 KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--I----YR--TDL-----FGVYY--KTW---GDDFTYHPLGGVLLN 455 (507)
T ss_dssp EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C----BC--SSC-----C--CC--CSS---BCSEESCCBCSSCTT
T ss_pred ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--c----cc--Ccc-----cccch--hhh---cccccccccCCcchh
Confidence 8999999999 9 67999999 99999987541 1 11 110 12332 333 567889999999999
Q ss_pred c
Q psy8892 1168 A 1168 (1183)
Q Consensus 1168 ~ 1168 (1183)
.
T Consensus 456 ~ 456 (507)
T 1coy_A 456 K 456 (507)
T ss_dssp T
T ss_pred h
Confidence 4
No 21
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.5e-34 Score=356.00 Aligned_cols=332 Identities=12% Similarity=0.138 Sum_probs=204.6
Q ss_pred CCcccchhhhhhhcc------cCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 271 NGERYSASRAFLRPI------RKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 271 ~g~r~s~~~~~l~~~------~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
...|+++..+++.+. .+++|++|++++.|++|+.++++. +++||++.+ +++..++.|+ +||||+|++.|
T Consensus 249 ~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~--~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s 325 (623)
T 3pl8_A 249 TFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNS--EIESLHIHDLISGDRFEIKAD-VYVLTAGAVHN 325 (623)
T ss_dssp TEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTSS--CEEEEEEEETTTCCEEEECEE-EEEECSCTTHH
T ss_pred CccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCCC--EEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCC
Confidence 345777778888776 667799999999999999976433 899999986 5677789997 79999999999
Q ss_pred hHHHHHhCCCChhhhhhcCCCceecCc-cccccccCcccceEEEEEcCchhhhhHhhhcCCCCCcccccccccccccccc
Q psy8892 343 PQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIGPRDHLEEMNIPVIEDLKV 421 (1183)
Q Consensus 343 p~LLl~SGig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1183)
|+||+.||||+..+++.+||++ |+| ||+||+||+...+ .+++++.. ...+. +.+...+|+--..+.+
T Consensus 326 ~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~~-~~~~~~~~--~~~~~-------~~~~~~g~~g~~~~~~ 393 (623)
T 3pl8_A 326 TQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLVFC-QTVMSTEL--IDSVK-------SDMTIRGTPGELTYSV 393 (623)
T ss_dssp HHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEEEE-EEEECHHH--HHHHT-------TTCEEESCTTSTTCEE
T ss_pred HHHHHhcCCCccccccccCCCC--CCcccccchhhCcCceE-EEEECCcc--ccccc-------ccccccccCCCcceec
Confidence 9999999999999999999999 999 9999999976655 67766531 11110 0000000000000000
Q ss_pred ccccccccchhchhhhcccchhhhhhcccchhhHHHHHHhC-CCCCcCc-ccccEEEEEeccCCCCCCCCcEeEeecCCc
Q psy8892 422 GYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRR-QGPYTSP-GGAETMALISSKFENDKTRPDIELVFGPGA 499 (1183)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1183)
.+...++. .... ..+. ....+++... .+++... ...+-... ..+.. ..| ++..+....
T Consensus 394 ~~~~~~p~--~~~~-----------p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~-~~~~~~~~~ 453 (623)
T 3pl8_A 394 TYTPGAST--NKHP-----------DWWN--EKVKNHMMQHQEDPLPIPFEDPEPQVT--TLFQP--SHP-WHTQIHRDA 453 (623)
T ss_dssp ECCTTCTT--CSSC-----------HHHH--HHHHHHHHHCTTCCCSSCTTCCCCEEE--CCCBT--TBC-EEEEEECCS
T ss_pred ccccCccc--ccCC-----------chhh--hhhhhhhhccccccccccccccccccc--ccccc--cCc-chhhhhhhh
Confidence 00000000 0000 0000 0012222222 4443221 00000001 11111 111 111111100
Q ss_pred cC-CCCCcccccccccchhhhhcccCCCCCCCeE-EEEeeecccCCceEEEeeC--CCCCCCCeeeCCCCCChh-hHHHH
Q psy8892 500 LT-GDSNGSLRSLLGISDKFYRKVYQPYFERQAY-NIVPLILRPFSRGFVKLRS--SNPFDSPKFYPNYLSDSR-DLDVL 574 (1183)
Q Consensus 500 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~srG~v~l~s--~d~~~~P~i~~~y~~~~~-D~~~~ 574 (1183)
+. ...++ .+ ...-.+ ......+.|.++|+|+|++ +|+++.|.++++|..++. |++++
T Consensus 454 ~~~~~~~~----------~~--------~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~ 515 (623)
T 3pl8_A 454 FSYGAVQQ----------SI--------DSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEA 515 (623)
T ss_dssp CCCSCCCC----------SS--------CGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHH
T ss_pred cccccccc----------cc--------ccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHH
Confidence 00 00000 00 000112 2334567899999999986 799999999999999999 99999
Q ss_pred HHHHHHHHHhhhccccccccc----cCCCCccchHHHHHHhccccc-cc-----cccc-CCcceeeeccccccccccccc
Q psy8892 575 IEAIKMCALFSLVCHLLVLSV----AHAQSQLFRTECALFSLVCHL-LL-----LSVA-HAQSQLFRTFINMVSKDAILT 643 (1183)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~t~-~g-----~~VV-D~~~rV~~gv~nLrV~D~s~~ 643 (1183)
.++++.+++++.......... ..++ ...|.++|+ || +||| |++|||| |++||||+|+|+|
T Consensus 516 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~H~~gt~~mg~~~~~~~vvvd~~~~~~-~~~~l~v~d~s~~ 586 (623)
T 3pl8_A 516 EDMMTDMCVMSAKIGGFLPGSLPQFMEPG--------LVLHLGGTHRMGFDEKEDNCCVNTDSRVF-GFKNLFLGGCGNI 586 (623)
T ss_dssp HHHHHHHHHHHTTTEEECTTSCSEECCTT--------TTCCCBCTTCBCSSTTTTTCSBCTTCBBT-TCSSEEECSGGGC
T ss_pred HHHHHHHHHHHHhcCCcccCchhhccCCC--------CcccCCCceeCCCCCCCCeeEECCCCCEe-cCCCeEEecCCcc
Confidence 999999999964432111000 0111 123566777 77 5897 9999999 9999999999999
Q ss_pred ccccccccccccccceEEeeCCCchHHHHHHHHhc
Q psy8892 644 PSNIVQDTKIFEKEYDFIVIGAGSGGSVIANRLTE 678 (1183)
Q Consensus 644 p~~~~~np~~~~~~~D~VVIGsG~aG~~~A~~Lae 678 (1183)
|+.++.||++ .-..+|.++|+
T Consensus 587 p~~~~~np~~--------------t~~a~a~r~a~ 607 (623)
T 3pl8_A 587 PTAYGANPTL--------------TAMSLAIKSCE 607 (623)
T ss_dssp CSCCCSCCHH--------------HHHHHHHHHHH
T ss_pred CCCCCcChHH--------------HHHHHHHHHHH
Confidence 9999999998 44556666655
No 22
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.97 E-value=3e-30 Score=317.70 Aligned_cols=443 Identities=12% Similarity=0.131 Sum_probs=254.0
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCCCcccccccc-----------------cccC--------
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVPLFVS-----------------YMVD-------- 708 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~~~~~p~~~~-----------------~~~~-------- 708 (1183)
|..+||+||||+|++|+++|..|++ .|++|+|||+++.......-..... ....
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~-~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~ 121 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTL 121 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHh-CCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccc
Confidence 3457999999999999999999999 6999999999875432110000000 0000
Q ss_pred -----CCCccCccccCccccccCCCCCeee----ccccceecCcccccceeEeeCCccccchhhccCCCCC-CccchHHH
Q psy8892 709 -----TDFNWGYKTEKDERFCRGMSDQTCN----WPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGW-SYRDVLPY 778 (1183)
Q Consensus 709 -----~~~~w~~~~~~~~~~~~~~~~~~~~----~~~G~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~gw-~~~~l~py 778 (1183)
...+|.-....-...+. ....... ...+..+||.+.++.+...|..+.+ .+..+.+.++ .++++.++
T Consensus 122 ~~~~~~~~~~~~~~v~l~~g~~-~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~l~~~~v~~~~~l~~~ 198 (623)
T 3pl8_A 122 VVDTLSPTSWQASTFFVRNGSN-PEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLLVKDDADADDAEWDRL 198 (623)
T ss_dssp CCCCSCTTSCCCSSCCSCTTCC-TTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCSSTTCHHHHHHHHHHH
T ss_pred ccccccccccccCcEEeccCCC-cccccchhhhhhcccccccCcceeeccccccCChHH--hhhhhcccCccChhhHHHH
Confidence 00011110000000000 0000011 1245667888888888777766642 2222222222 35667888
Q ss_pred HHHhhcccCCCCCCCCCCCCCCccccccCCCCChHHHH-HHHHHHHCCCCCCCCCCCCceeeeecccccCCccchHHHhh
Q psy8892 779 FKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAA-FLEAGSELGYDQVDHCENPIGFSYVLANKIRGARQSASKAF 857 (1183)
Q Consensus 779 ~~k~e~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~d~~~~~~g~~~~~~~~~~g~r~~~~~~~ 857 (1183)
|.+.+...... .+ .+....... ..............+.......... .....|+++..++
T Consensus 199 ~~~~~~l~~vg---------g~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~a~~~~---~~~~~r~s~~~~~ 259 (623)
T 3pl8_A 199 YTKAESYFQTG---------TD-------QFKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRR---SPTFVEWSSANTV 259 (623)
T ss_dssp HHHHHHHHTEE---------SC-------TTTTCHHHHHHHHHHHHHTTTTSCCEECCEEEEEE---ETTEEEECCHHHH
T ss_pred HHHHHHhcccc---------cc-------cccCccccccchHHHHHhhhhcccccccchhhccC---CCCccccchHHhh
Confidence 88877654320 00 011111111 1111111110000000000000000 1123466777888
Q ss_pred hhhh------hcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCCCCcc
Q psy8892 858 IRPI------RKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRP 929 (1183)
Q Consensus 858 L~~~------~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~~~ 929 (1183)
+.++ .+++|++|++++.|++|++++++++++||++.+ +++..++.| ++||||+|++.+|++|++||||++.
T Consensus 260 l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A-~~VIlaaG~~~s~~lL~~sgiG~~~ 338 (623)
T 3pl8_A 260 FDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQLLVNSGFGQLG 338 (623)
T ss_dssp CCCCCEEETTEEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECE-EEEEECSCTTHHHHHHHTTTSSCCS
T ss_pred hhhhhcchhhccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEEC-CEEEEcCCCcCCHHHHHhcCCCccc
Confidence 8777 667799999999999999986446999999986 577788999 6999999999999999999999999
Q ss_pred chhhcCCCccccCC-CCcccccccccceEEEEEcCccccc-ccc----------cC-------------Ch---HHHHHH
Q psy8892 930 HLEELNIPVIQDLK-VGYNMQDHLSMAGLVFLVNSSVTIV-ESK----------YT-------------KP---RYLMDF 981 (1183)
Q Consensus 930 ~l~~~gi~v~~dlp-VG~nl~dh~~~~~~~~~~~~~~~~~-~~~----------~~-------------~~---~~~~~~ 981 (1183)
+|+.+||++ ||| ||+|||||+.. .+.+.+++..... .+. .. .+ ..+.++
T Consensus 339 ~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~ 415 (623)
T 3pl8_A 339 RPNPANPPE--LLPSLGSYITEQSLV-FCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNH 415 (623)
T ss_dssp SCCTTSCCS--SCTTTTBSCBCCCEE-EEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHH
T ss_pred cccccCCCC--CCcccccchhhCcCc-eEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhh
Confidence 999999999 999 99999999986 7777776542100 000 00 01 112222
Q ss_pred Hhc-CCCCCCCccccceEEEeecCCCCCCCCCCeeEeecCCcccCCCCCcchhhcccccccccccc-----c-CCCCCCe
Q psy8892 982 LVN-GAGPLTLPGGAEALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVY-----R-PFAEREA 1054 (1183)
Q Consensus 982 ~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~ 1054 (1183)
+.+ ..+|+..+ .... .|++.+-+.. .++++..+....+ . .....-.
T Consensus 416 ~~~~~~~~~~~~----------~~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (623)
T 3pl8_A 416 MMQHQEDPLPIP----------FEDP----EPQVTTLFQP-------------SHPWHTQIHRDAFSYGAVQQSIDSRLI 468 (623)
T ss_dssp HHHCTTCCCSSC----------TTCC----CCEEECCCBT-------------TBCEEEEEECCSCCCSCCCCSSCGGGE
T ss_pred hhcccccccccc----------cccc----cccccccccc-------------cCcchhhhhhhhccccccccccccceE
Confidence 222 24444311 0000 0111110000 0011000000000 0 0011112
Q ss_pred EEE-EEeeccccCCCcccCcceEEEecC--CCCCCCCeeecCCCCChh-hHHHHHHHHHHHHHHHcChhhhHhhhccCCc
Q psy8892 1055 YSI-VPVLVRPRSRGFVRLSRGFVKLRS--SNPFDSPKFYPNYLSDSR-DLDVLIEAIKMAVELSETRAMQKYASKLLPV 1130 (1183)
Q Consensus 1055 ~~~-~~~l~~P~SrG~~~~~~~~V~l~s--~dp~~~P~I~~~yls~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1130 (1183)
+.+ ....+.|.++| +|+|.+ +|+++.|.++++|..++. |++.+.++++.++++++....+.
T Consensus 469 ~~~~~~~e~~p~~~n-------~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~-------- 533 (623)
T 3pl8_A 469 VDWRFFGRTEPKEEN-------KLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFL-------- 533 (623)
T ss_dssp EEEEEEECCCCCTTC-------EEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEEC--------
T ss_pred EEEEEEEeeccCCCC-------EEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcc--------
Confidence 323 45678899999 999988 899999999999999999 99999999999999997532211
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcCCCCcccccccccccC-CCCcEEEcCC
Q psy8892 1131 KFPGCEPYEFRSDEYWACAARQLTTNLHHQICPHIADAV-DRRGEIMLSS 1179 (1183)
Q Consensus 1131 ~~p~~~~~~~~s~~~~~~~i~~~~~t~~H~~gTc~Mg~~-~~~~~Vvd~~ 1179 (1183)
+... +.| ....+.+|++|||+||++ ++.+||||+.
T Consensus 534 --~~~~-------~~~-----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~ 569 (623)
T 3pl8_A 534 --PGSL-------PQF-----MEPGLVLHLGGTHRMGFDEKEDNCCVNTD 569 (623)
T ss_dssp --TTSC-------SEE-----CCTTTTCCCBCTTCBCSSTTTTTCSBCTT
T ss_pred --cCch-------hhc-----cCCCCcccCCCceeCCCCCCCCeeEECCC
Confidence 1100 000 012468999999999998 6666666875
No 23
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.51 E-value=1.5e-13 Score=166.27 Aligned_cols=68 Identities=16% Similarity=0.312 Sum_probs=54.8
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccC-cHHHHHH
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLN-SPQLLML 922 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~-tp~lL~~ 922 (1183)
....|...+++.|++|+++++|++|+.+++ ++|+||++..+++.++|+|+|.||||+|++. ++.+|..
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 344455555667999999999999999843 7999999988888889999668999999998 5555543
No 24
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.49 E-value=3.6e-13 Score=163.09 Aligned_cols=65 Identities=20% Similarity=0.353 Sum_probs=51.6
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCC-ChHHHHH
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN-SPQLLML 348 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~-sp~LLl~ 348 (1183)
.|...+++.|++|+++++|++|+.++++ +|+||++.++++..+|+|+|.||||+|++. ++.+|..
T Consensus 207 ~L~~~~~~~Gv~i~~~t~v~~L~~~~~g---~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 207 PLVETAEKLGVRAEYDMRVQTLVTDDTG---RVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECTTC---CEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCEEEecCEeEEEEECCCC---cEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 3433444569999999999999998433 999999988888888999656999999998 5665543
No 25
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.20 E-value=5.5e-11 Score=145.67 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=49.7
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCcHH
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNSPQ 918 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~tp~ 918 (1183)
...|...+++.|++|+++++|++|+.+++ ++++||++.. +++..+|+| +.||||+|++...+
T Consensus 253 ~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 253 IDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCH
Confidence 33454555667999999999999998753 6899999985 666778999 78999999998643
No 26
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.19 E-value=1e-10 Score=143.28 Aligned_cols=59 Identities=19% Similarity=0.340 Sum_probs=47.4
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeC-CCCcceEEEEEEEe-CCeEEEEEeCcEEEEcCCCCCChH
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDE-NDNLKRATGVEFFK-NKQRHTVRARKEVILSAGALNSPQ 344 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~-~~~~~rv~GV~~~~-~g~~~~i~A~k~VILAAGai~sp~ 344 (1183)
.|...+++.|++|+++++|++|+.++ + +|+||++.. +++..+|+|+ .||||+|++...+
T Consensus 255 ~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 255 TLRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCH
Confidence 34344455699999999999999987 5 999999885 6666789996 5999999998543
No 27
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.19 E-value=8.8e-11 Score=144.14 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=50.6
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCc-HHHH
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNS-PQLL 920 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~t-p~lL 920 (1183)
...|...+++.|++|+++++|++|+.+++ ++++||++.. +++..+|+| +.||+|+|++.. +.++
T Consensus 258 ~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a-~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 258 VQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKA-DAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEEC-CeEEEeCCCcccCHHHH
Confidence 34455556677999999999999998753 6899999986 677778999 669999999975 4443
No 28
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.17 E-value=2.3e-10 Score=140.41 Aligned_cols=59 Identities=24% Similarity=0.264 Sum_probs=47.3
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-CCeEEEEEeCcEEEEcCCCCCCh
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NKQRHTVRARKEVILSAGALNSP 343 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-~g~~~~i~A~k~VILAAGai~sp 343 (1183)
.|...+++.|++|+++++|++|+.++++ +|+||++.. +++..+|+|+. ||||+|++...
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~~g---~v~Gv~~~~~~g~~~~i~a~~-VVlAtGg~~~n 319 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDDKG---TVKGILVKGMYKGYYWVKADA-VILATGGFAKN 319 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECTTS---CEEEEEEEETTTEEEEEECSE-EEECCCCCTTC
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcCCC---eEEEEEEEeCCCcEEEEECCe-EEEeCCCcccC
Confidence 3444445569999999999999987622 899999887 67777899986 99999999753
No 29
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.15 E-value=4e-10 Score=137.94 Aligned_cols=57 Identities=12% Similarity=0.086 Sum_probs=47.3
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCc
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~t 916 (1183)
.|...+.+.|++|++++.|++|+.++ ++|.||.+.+ +++...|+| +.||||+|++..
T Consensus 160 ~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 218 (621)
T 2h88_A 160 TLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRA-KNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEc-CeEEECCCcccc
Confidence 34445567899999999999999876 7999999874 566778999 689999999974
No 30
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.09 E-value=6.1e-10 Score=137.30 Aligned_cols=56 Identities=7% Similarity=0.178 Sum_probs=45.9
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCc
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~t 916 (1183)
|...+.+.|++|++++.|++|+.++ ++|+||.+.+ +++...|+| +.||||+|++..
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVA-KGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEC-SEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEc-CEEEEccCcchh
Confidence 3344456799999999999999876 7999998863 566778999 789999999973
No 31
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.07 E-value=9.4e-10 Score=134.63 Aligned_cols=58 Identities=9% Similarity=0.065 Sum_probs=46.1
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCc
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~t 916 (1183)
.|...+++.|++|++++.|++|+.+++ ++++||.+.+ +++..+|+| +.||||+|++..
T Consensus 148 ~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGg~~~ 207 (588)
T 2wdq_A 148 TLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKA-RATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEc-CEEEECCCCCcc
Confidence 344445567999999999999998632 7899999864 566678999 689999999864
No 32
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.07 E-value=2.3e-10 Score=132.54 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=47.8
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHc-CCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLS-GVG 926 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~S-GIG 926 (1183)
.|...+++.|++|+++++|++|..+++ .+..|+.. +++..+++| +.||+|+|++ +++|+... |+.
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~~~~v~~~-~g~~~~~~a-~~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 155 AYQGDAESDGAQLVFHTPLIAGRVRPE--GGFELDFG-GAEPMTLSC-RVLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTT--SSEEEEEC-TTSCEEEEE-EEEEECCGGG-HHHHHHTEETSC
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCC--ceEEEEEC-CCceeEEEe-CEEEECCCcc-hHHHHHHhcCCC
Confidence 344555678999999999999998763 33345543 344457899 6799999976 88888877 763
No 33
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.05 E-value=1.1e-09 Score=134.18 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=50.8
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCc-HHHHHH
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNS-PQLLML 922 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~t-p~lL~~ 922 (1183)
...|...+++.|++|+++++|++|+.+++ ++++||++.. +++..+|+| +.||||+|++.. ++++..
T Consensus 258 ~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 258 AQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHHHH
Confidence 34455555667999999999999988653 6899999985 677778999 789999999974 555543
No 34
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.02 E-value=3.4e-09 Score=129.62 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=48.1
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeC-CCCcceEEEEEEEe-CCeEEEEEeCcEEEEcCCCCCC-hHHHH
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDE-NDNLKRATGVEFFK-NKQRHTVRARKEVILSAGALNS-PQLLM 347 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~-~~~~~rv~GV~~~~-~g~~~~i~A~k~VILAAGai~s-p~LLl 347 (1183)
.|...+++.|++|+++++|++|+.++ + +|+||++.+ +++..+|+|+ .||||+|++.. +.++.
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHH
Confidence 34444455699999999999999887 5 899999886 6766789996 59999999974 55543
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.02 E-value=2.7e-10 Score=131.92 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=45.6
Q ss_pred hcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHh-CCC
Q psy8892 283 RPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLS-GIG 352 (1183)
Q Consensus 283 ~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~S-Gig 352 (1183)
...+++.|++|+++++|++|..+++ .+..|.+ .+++..+++|+. ||+|+|++ |.+|+... |+.
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~----~~~~v~~-~~g~~~~~~a~~-VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPE----GGFELDF-GGAEPMTLSCRV-LINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTT----SSEEEEE-CTTSCEEEEEEE-EEECCGGG-HHHHHHTEETSC
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCC----ceEEEEE-CCCceeEEEeCE-EEECCCcc-hHHHHHHhcCCC
Confidence 3344567999999999999998876 3334544 344445789986 99999986 77887765 653
No 36
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.00 E-value=4.7e-09 Score=128.45 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=45.7
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
|...+.+.|++|+.++.|++|+.+++ +|+||.+.+ +++...|+|+ .||||+|++..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG----ECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT----EEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC----EEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 33344567999999999999999876 999999874 5666789997 59999999863
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.99 E-value=3.9e-10 Score=131.35 Aligned_cols=60 Identities=20% Similarity=0.280 Sum_probs=44.5
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCC
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGI 351 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGi 351 (1183)
|...+++.|++|+.+++|++|..+++ +++||++ .++ +++|+. ||+|+|++ |+.|+...|+
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~----~v~gv~~-~~g---~i~a~~-VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENN----EIKGVKT-NKG---IIKTGI-VVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS----BEEEEEE-TTE---EEECSE-EEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHCCCEEECCceEEEEEEECC----EEEEEEE-CCc---EEECCE-EEECcchh-HHHHHHHcCC
Confidence 33344466999999999999998876 7888765 233 689986 99999986 5666655443
No 38
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.99 E-value=3.2e-09 Score=130.92 Aligned_cols=53 Identities=8% Similarity=0.159 Sum_probs=43.6
Q ss_pred ccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 285 IRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 285 ~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
.+.+.|++|+.++.|++|+.+++ +|+||.+.+ +++...|+|+ .||||+|++..
T Consensus 167 ~a~~~gv~i~~~~~v~~L~~~~g----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 167 ECLKLGVSIQDRKEAIALIHQDG----KCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHHHTCEEECSEEEEEEEEETT----EEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HHHhCCCEEEECcEEEEEEecCC----EEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 33456999999999999999876 999998874 5666779997 59999999853
No 39
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.97 E-value=6.8e-10 Score=131.90 Aligned_cols=56 Identities=27% Similarity=0.348 Sum_probs=43.2
Q ss_pred hhcccCCCCeEEEcCc---eEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHH
Q psy8892 282 LRPIRKRPNLKVAKRA---RVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLL 346 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~---~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LL 346 (1183)
|...+++.|++|++++ +|++|..+++ +++||++.++. +++|+. ||+|+|++ |++|+
T Consensus 167 L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~----~v~gV~t~~G~---~i~Ad~-VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 167 AAREAQRMGVKFVTGTPQGRVVTLIFENN----DVKGAVTADGK---IWRAER-TFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHTTCEEEESTTTTCEEEEEEETT----EEEEEEETTTE---EEECSE-EEECCGGG-GGGTS
T ss_pred HHHHHHhcCCEEEeCCcCceEEEEEecCC----eEEEEEECCCC---EEECCE-EEECCCCC-hhhhc
Confidence 3334456799999999 9999999877 89998764432 689986 99999987 55543
No 40
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.97 E-value=2.6e-09 Score=130.11 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=49.7
Q ss_pred cCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHHHHhCCC
Q psy8892 286 RKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLLMLSGIG 352 (1183)
Q Consensus 286 ~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LLl~SGig 352 (1183)
+.+.|++|+++++|++|..+++ ++.||++.+ +++..+++|+. ||+|+|++ +..|+...|+.
T Consensus 180 a~~~G~~i~~~~~V~~l~~~~g----~v~gV~~~d~~tg~~~~i~A~~-VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 180 AVARGAVALNYMKVESFIYDQG----KVVGVVAKDRLTDTTHTIYAKK-VVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHTTCEEEESEEEEEEEEETT----EEEEEEEEETTTCCEEEEEEEE-EEECCGGG-HHHHHHTTTCC
T ss_pred HHHcCCEEEcCCEEEEEEEcCC----eEEEEEEEEcCCCceEEEECCE-EEECCCcc-hHHHHHhcCCC
Confidence 4456999999999999999877 899999986 56567899975 99999986 77777665543
No 41
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.97 E-value=2.8e-09 Score=129.17 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=42.9
Q ss_pred CCCcEEEcCcEEEEEEEcCCCC------eEEEEEEee--CCeEEEEEeccEEEEccCccCc
Q psy8892 864 RHNLKVAKEARVTKILIDPITK------RTYGVEFSK--NRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 864 ~~g~~i~~~t~V~~I~~~~~~g------ra~GV~~~~--~~~~~~i~A~k~VILAaGa~~t 916 (1183)
+.|++|++++.|++|+.+++ + ++.||.+.+ +++..+|+| +.||+|+|++..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHA-KAVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEEC-SEEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCccc
Confidence 47999999999999998432 4 899999875 577778999 789999999863
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.96 E-value=1.4e-09 Score=126.53 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=47.0
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.|...+++.|++|+++++|++|..++ ++++||++. ++ +++| +.||+|+|++ ++.++...|+
T Consensus 154 ~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~--~g--~i~a-~~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 154 AFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTN--KG--IIKT-GIVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEET--TE--EEEC-SEEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEEC--Cc--EEEC-CEEEECcchh-HHHHHHHcCC
Confidence 34445567799999999999999876 678888753 22 6899 6799999976 6777777665
No 43
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.96 E-value=1.2e-09 Score=134.70 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=41.6
Q ss_pred CcEEEcCcEEEEEEEcCC-CCeEEEEEEee--CCeEEEEEeccEEEEccCccC
Q psy8892 866 NLKVAKEARVTKILIDPI-TKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLN 915 (1183)
Q Consensus 866 g~~i~~~t~V~~I~~~~~-~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~ 915 (1183)
|++|++++.|++|+.+++ .++|+||.+.+ +++...|+| |.||||+|+++
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~A-k~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKA-NAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEe-CEEEECCCccc
Confidence 999999999999999862 13999998763 566778999 78999999987
No 44
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.95 E-value=6.1e-09 Score=127.45 Aligned_cols=53 Identities=9% Similarity=0.147 Sum_probs=42.9
Q ss_pred ccCCCCeEEEcCceEEEEEee-CCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 285 IRKRPNLKVAKRARVTKVLID-ENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 285 ~~~~~g~~i~~~~~V~~I~~~-~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
.+.+.|++|++++.|++|+.+ ++ +++||.+.+ +++..+|+|+ .||||+|++..
T Consensus 152 ~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 152 QNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 334569999999999999986 55 899999874 5666679997 59999999853
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.95 E-value=3.6e-09 Score=123.03 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=41.9
Q ss_pred cccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCC
Q psy8892 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGI 351 (1183)
Q Consensus 284 ~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGi 351 (1183)
..+++.|++|+++++|++|..+++ + .+|++ .++ +++|++ ||+|+|++ |+.|+...|+
T Consensus 162 ~~a~~~Gv~i~~~~~V~~i~~~~~----~-~~V~t--~~g--~i~a~~-VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 162 RGIRRNQGQVLCNHEALEIRRVDG----A-WEVRC--DAG--SYRAAV-LVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHHHHTTCEEESSCCCCEEEEETT----E-EEEEC--SSE--EEEESE-EEECCGGG-HHHHHHHHTC
T ss_pred HHHHHCCCEEEcCCEEEEEEEeCC----e-EEEEe--CCC--EEEcCE-EEECCChh-HHHHHHHhCC
Confidence 344456999999999999998876 5 34433 332 689986 99999986 6777766554
No 46
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.94 E-value=3.8e-09 Score=130.83 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=45.6
Q ss_pred hhhhhhcCC-Cc-EEEcCcEEEEEEEcCC-CCeEEEEEEe--eCCeEEEEEeccEEEEccCccCc
Q psy8892 857 FIRPIRKRH-NL-KVAKEARVTKILIDPI-TKRTYGVEFS--KNRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 857 ~L~~~~~~~-g~-~i~~~t~V~~I~~~~~-~gra~GV~~~--~~~~~~~i~A~k~VILAaGa~~t 916 (1183)
.|...+++. |+ +|++++.|++|+.+++ .++|+||.+. .+++..+|+| +.||+|+|++..
T Consensus 156 ~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 156 IIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred HHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 444444454 99 9999999999998762 0299999875 3566678999 889999999974
No 47
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.93 E-value=2.8e-09 Score=123.88 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=44.6
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.|...+++.|++|+++++|++|..++ ++ ++|++ .++ +++| +.||+|+|++ +++|+...|+
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t--~~g--~i~a-~~VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRC--DAG--SYRA-AVLVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEEC--SSE--EEEE-SEEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEe--CCC--EEEc-CEEEECCChh-HHHHHHHhCC
Confidence 34445567799999999999999876 44 44543 233 7899 6799999976 7888877765
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.91 E-value=4.5e-09 Score=123.00 Aligned_cols=36 Identities=39% Similarity=0.585 Sum_probs=33.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..++||||||+|++|+++|+.|+++ |++|+||||+.
T Consensus 2 ~~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~ 37 (397)
T 2oln_A 2 TESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHT 37 (397)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 3569999999999999999999998 99999999986
No 49
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.91 E-value=5.1e-09 Score=127.56 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=53.3
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
|...+++.|++|+++++|++|..++ +++.||++.+ +++..+|+| +.||+|+|++ +.+++...|+.
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYA-KKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEE-EEEEECCGGG-HHHHHHTTTCC
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEEC-CEEEECCCcc-hHHHHHhcCCC
Confidence 3344556799999999999999986 7899999976 566778999 6799999975 88888887775
No 50
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.90 E-value=9.3e-09 Score=126.05 Aligned_cols=57 Identities=14% Similarity=0.199 Sum_probs=45.0
Q ss_pred hhhhhcCCC-cEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcH
Q psy8892 858 IRPIRKRHN-LKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSP 917 (1183)
Q Consensus 858 L~~~~~~~g-~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp 917 (1183)
|...+++.| ++|++++.|++|+.++ ++++||.+.+ +++..+|+| +.||+|+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRA-NAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEEC-SCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEc-CeEEECCCCCccc
Confidence 334444455 9999999999999886 7999998763 566678999 6799999998654
No 51
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.90 E-value=2.4e-09 Score=127.22 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=44.6
Q ss_pred hhhhhhcCCCcEEEcCc---EEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEA---RVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t---~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
.|...+++.|++|++++ +|++|..++ ++++||++.++ + +++| +.||+|+|++ |++|+
T Consensus 166 ~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G-~--~i~A-d~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 166 AAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADG-K--IWRA-ERTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTT-E--EEEC-SEEEECCGGG-GGGTS
T ss_pred HHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCC-C--EEEC-CEEEECCCCC-hhhhc
Confidence 44455667899999999 999999876 68999987543 2 6889 6799999987 55554
No 52
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.89 E-value=1.5e-09 Score=127.37 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=43.9
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCC
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGI 351 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGi 351 (1183)
|...+++.|++|+.+++|++|..+++ ++.+|++. ++ +++++. ||+|+|++ ++.|+...|+
T Consensus 180 l~~~~~~~g~~i~~~~~v~~i~~~~~----~~~~v~~~-~g---~~~a~~-vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 180 FARKANEMGVDIIQNCEVTGFIKDGE----KVTGVKTT-RG---TIHAGK-VALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS----BEEEEEET-TC---CEEEEE-EEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEeCC----EEEEEEeC-Cc---eEECCE-EEECCchh-HHHHHHHcCC
Confidence 33344457999999999999998766 77777653 33 588975 99999986 5566655444
No 53
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.89 E-value=7.7e-09 Score=121.34 Aligned_cols=61 Identities=18% Similarity=0.283 Sum_probs=46.6
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.|...+++.|++++++++|++|..++ +++.+|++.+ + +++| +.||+|+|++ ++.++...|+
T Consensus 179 ~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~-g---~~~a-~~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 179 AFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTR-G---TIHA-GKVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETT-C---CEEE-EEEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCC-c---eEEC-CEEEECCchh-HHHHHHHcCC
Confidence 34445566799999999999999876 6788887643 3 6888 6799999976 6677777665
No 54
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.87 E-value=6.5e-09 Score=126.93 Aligned_cols=57 Identities=14% Similarity=0.221 Sum_probs=46.7
Q ss_pred cCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHHHH
Q psy8892 286 RKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLLML 348 (1183)
Q Consensus 286 ~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LLl~ 348 (1183)
+.+.|++|+++++|++|..+++ ++.||++.+ +++..+|+|+. ||+|+|++ +..|+..
T Consensus 198 a~~~Ga~i~~~t~V~~l~~~~~----~v~gV~~~d~~tg~~~~i~A~~-VV~AaG~w-s~~l~~~ 256 (571)
T 2rgh_A 198 AAEDGAYLVSKMKAVGFLYEGD----QIVGVKARDLLTDEVIEIKAKL-VINTSGPW-VDKVRNL 256 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEETT----EEEEEEEEETTTCCEEEEEBSC-EEECCGGG-HHHHHTT
T ss_pred HHHcCCeEEeccEEEEEEEeCC----EEEEEEEEEcCCCCEEEEEcCE-EEECCChh-HHHHHHh
Confidence 3457999999999999999877 899999876 45556799986 99999987 6776644
No 55
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.87 E-value=1.2e-08 Score=123.45 Aligned_cols=53 Identities=21% Similarity=0.480 Sum_probs=41.2
Q ss_pred CCCeEEEcCceEEEEEeeCCCC---cceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCC
Q psy8892 288 RPNLKVAKRARVTKVLIDENDN---LKRATGVEFFK--NKQRHTVRARKEVILSAGALN 341 (1183)
Q Consensus 288 ~~g~~i~~~~~V~~I~~~~~~~---~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~ 341 (1183)
..|++|++++.|++|+.++++. ..+++||.+.+ +++..+|+|+ .||||+|++.
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~ 208 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGAS 208 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCcc
Confidence 3799999999999999843210 00689999885 6767789997 5999999975
No 56
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.84 E-value=1.2e-08 Score=124.66 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=50.4
Q ss_pred hhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 860 PIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 860 ~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..+++.|++|+++++|++|..++ +++.||++.+ +++..+|+| +.||+|||++ +..++...|+
T Consensus 196 ~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 196 KKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKA-KLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEB-SCEEECCGGG-HHHHHTTCCS
T ss_pred HHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEc-CEEEECCChh-HHHHHHhhcc
Confidence 34557899999999999999886 6899999875 455568999 6799999977 7888876665
No 57
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.84 E-value=9.2e-09 Score=126.69 Aligned_cols=49 Identities=24% Similarity=0.455 Sum_probs=40.8
Q ss_pred CeEEEcCceEEEEEeeCCC-CcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCC
Q psy8892 290 NLKVAKRARVTKVLIDEND-NLKRATGVEFFK--NKQRHTVRARKEVILSAGALN 341 (1183)
Q Consensus 290 g~~i~~~~~V~~I~~~~~~-~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~ 341 (1183)
|++|+.++.|++|+.++++ + +|+||.+.+ +++...|+|+ .||||+|++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g--~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPN--RIAGAVGFNLRANEVHIFKAN-AMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSSTT--BEEEEEEEESSSSCEEEEECS-EEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCccc--eEEEEEEEEcCCCcEEEEEeC-EEEECCCccc
Confidence 8999999999999997651 1 899998764 5666789997 5999999986
No 58
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.82 E-value=2.9e-08 Score=116.04 Aligned_cols=36 Identities=33% Similarity=0.535 Sum_probs=33.0
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..++|+||||+|++|+++|+.|++ .|++|+||||+.
T Consensus 2 ~~~~DVvIIGaG~~Gl~~A~~La~-~G~~V~vlE~~~ 37 (397)
T 2oln_A 2 TESYDVVVVGGGPVGLATAWQVAE-RGHRVLVLERHT 37 (397)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 346899999999999999999999 699999999986
No 59
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.82 E-value=5.1e-08 Score=119.48 Aligned_cols=51 Identities=18% Similarity=0.354 Sum_probs=42.2
Q ss_pred CCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 287 KRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 287 ~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
+..|++|+.++.|++|+.+++ +|+||.+.+ +++..+|+|+. ||+|+|++..
T Consensus 146 ~~gnv~i~~~~~v~~l~~~~g----~v~Gv~~~~~~~G~~~~i~A~~-VVlAtGg~s~ 198 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVDDG----HVRGLVAMNMMEGTLVQIRANA-VVMATGGAGR 198 (602)
T ss_dssp TCTTEEEEETEEEEEEEEETT----EEEEEEEEETTTTEEEEEECSC-EEECCCCCGG
T ss_pred hCCCcEEEeCCEEEEEEEeCC----EEEEEEEEEcCCCcEEEEEcCe-EEECCCCCcc
Confidence 333499999999999999876 999998764 56667899986 9999999854
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.81 E-value=3.5e-09 Score=125.74 Aligned_cols=56 Identities=18% Similarity=0.248 Sum_probs=43.9
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQ 918 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~ 918 (1183)
.|...+++.|++|+++++|++|..++ +++.+|++.+ ++ +++| +.||+|+|++..|.
T Consensus 139 ~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~-G~--~i~A-d~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 139 ALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQT-GE--VLET-NHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETT-CC--EEEC-SCEEECCCCSSSGG
T ss_pred HHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECC-CC--EEEC-CEEEECCCCCcCCC
Confidence 44445556899999999999999876 6788888753 32 5889 67999999998663
No 61
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.80 E-value=1.3e-08 Score=130.49 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=43.7
Q ss_pred cccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCC
Q psy8892 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGI 351 (1183)
Q Consensus 284 ~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGi 351 (1183)
..+++.|++|+.+++|++|..+++ ++++|++ .++ +++|+. ||+|+|++ ++.|+...|+
T Consensus 159 ~~a~~~Gv~i~~~t~V~~i~~~~~----~v~~V~t-~~G---~i~Ad~-VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 159 KRTESAGVTYRGSTTVTGIEQSGG----RVTGVQT-ADG---VIPADI-VVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT----EEEEEEE-TTE---EEECSE-EEECCGGG-HHHHHHTTTC
T ss_pred HHHHHcCCEEECCceEEEEEEeCC----EEEEEEE-CCc---EEECCE-EEECCccc-hHHHHHHhCC
Confidence 344456999999999999998876 7878764 233 689986 99999986 5666655444
No 62
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.79 E-value=2.3e-08 Score=116.59 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 58999999999999999999998 99999999986
No 63
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.79 E-value=1.2e-08 Score=130.78 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=47.3
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.|...+++.|++|+++++|++|..++ +++++|++. ++ +|+| +.||+|+|++ ++.++...|+
T Consensus 156 ~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~--~G--~i~A-d~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 156 LLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTA--DG--VIPA-DIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEET--TE--EEEC-SEEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEEC--Cc--EEEC-CEEEECCccc-hHHHHHHhCC
Confidence 34455567799999999999999876 678788753 22 6899 6799999986 6788777775
No 64
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.76 E-value=5.6e-08 Score=120.29 Aligned_cols=58 Identities=24% Similarity=0.326 Sum_probs=43.5
Q ss_pred hhcccCCC-Ce-EEEcCceEEEEEeeCCC-CcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCC
Q psy8892 282 LRPIRKRP-NL-KVAKRARVTKVLIDEND-NLKRATGVEFFK--NKQRHTVRARKEVILSAGALNS 342 (1183)
Q Consensus 282 l~~~~~~~-g~-~i~~~~~V~~I~~~~~~-~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~s 342 (1183)
+...+++. |+ +|+.++.|++|+.++++ + +|+||.+.+ +++...|+|+ .||||+|++..
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g--~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLKDNNDPN--AVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEECTTCTT--BEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEEcCCccc--eeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 33333344 89 99999999999987541 1 799998753 5656678996 59999999864
No 65
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.75 E-value=1.4e-08 Score=127.04 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+||||||+|++|+++|+.|+++ |++|+|||+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 459999999999999999999998 99999999975
No 66
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.73 E-value=7.5e-09 Score=122.93 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=42.5
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChH
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQ 344 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~ 344 (1183)
|...+++.|++|+++++|++|..+++ ++.+|++.+ +. +++|+. ||+|+|++..|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~----~v~~V~~~~-G~--~i~Ad~-VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG----QTKAVILQT-GE--VLETNH-VVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEETT-CC--EEECSC-EEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC----cEEEEEECC-CC--EEECCE-EEECCCCCcCCC
Confidence 33344457999999999999998776 788887643 32 589986 999999987653
No 67
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.73 E-value=5e-08 Score=122.11 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=32.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+|+||||+|++|+++|+.|++ .|++|+||||+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLR-RGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 35899999999999999999999 699999999975
No 68
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.72 E-value=6.5e-08 Score=113.06 Aligned_cols=38 Identities=24% Similarity=0.472 Sum_probs=32.6
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
+..+|||||||+|++|+++|+.|++. |++|+|||+++.
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~ 61 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARA 61 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 34579999999999999999999999 999999999873
No 69
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.72 E-value=1.2e-08 Score=121.34 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=45.6
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEE---------------cCCCCeEEEEEEeeCCeEEEE--EeccEEEEccCccCcHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILI---------------DPITKRTYGVEFSKNRKSYTV--KCRKEVILSAGTLNSPQL 919 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~---------------~~~~gra~GV~~~~~~~~~~i--~A~k~VILAaGa~~tp~l 919 (1183)
.|...+++.|++|+++++|++|.. ++ +++.+|+..+ + ++ +| +.||+|+|++ +++|
T Consensus 186 ~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~-g---~i~~~A-d~VV~AtG~~-s~~l 257 (448)
T 3axb_A 186 YYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSD-G---TRVEVG-EKLVVAAGVW-SNRL 257 (448)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETT-S---CEEEEE-EEEEECCGGG-HHHH
T ss_pred HHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCC-C---EEeecC-CEEEECCCcC-HHHH
Confidence 344455677999999999999988 43 5677776532 3 57 88 6799999986 7788
Q ss_pred HHHcCC
Q psy8892 920 LMLSGV 925 (1183)
Q Consensus 920 L~~SGI 925 (1183)
+...|+
T Consensus 258 ~~~~g~ 263 (448)
T 3axb_A 258 LNPLGI 263 (448)
T ss_dssp HGGGTC
T ss_pred HHHcCC
Confidence 776654
No 70
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.72 E-value=1.8e-08 Score=121.85 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=42.1
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLM 921 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~ 921 (1183)
.|...+++.|++|+++++|++|+.++ ++++||++.++. ++.| +.||+++....+.+.|+
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~---~~~a-d~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGR---RFLT-QAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSC---EEEC-SCEEECCC---------
T ss_pred HHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCCc---EEEc-CEEEECCCHHHHHHHhc
Confidence 34455667899999999999999988 799999987654 6888 67999999888876554
No 71
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.71 E-value=4.5e-08 Score=114.19 Aligned_cols=58 Identities=17% Similarity=0.320 Sum_probs=44.5
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCCh
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp 343 (1183)
.+|...+.+.|++++.+++|+.+..+++ ++++|....+++..+++|+ +|+.|.+.+|.
T Consensus 106 ~~L~~~a~~~G~~~~~~~~v~~~~~~~~----~~~~v~~~~~~~~~~~~a~--~vIgAdG~~S~ 163 (397)
T 3oz2_A 106 KHLAALAAKAGADVWVKSPALGVIKENG----KVAGAKIRHNNEIVDVRAK--MVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEETT----EEEEEEEEETTEEEEEEEE--EEEECCCTTCH
T ss_pred HHHHHHHHhcCcEEeeeeeeeeeeeccc----eeeeeeecccccceEEEEe--EEEeCCccccH
Confidence 3444445567999999999999999988 8999988888888889996 44544445554
No 72
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.70 E-value=2.8e-08 Score=119.32 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=34.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
...++||||||+|++|+++|+.|++. |++|+|||+++.
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~ 141 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKE 141 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCc
Confidence 34468999999999999999999998 999999999963
No 73
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.70 E-value=1.3e-07 Score=110.24 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=32.7
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
++|+||||+|++|+++|+.|++ .|++|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 5899999999999999999999 5999999999863
No 74
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.70 E-value=9.8e-09 Score=122.22 Aligned_cols=34 Identities=35% Similarity=0.572 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CEEEEEcCc
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN-WTVLLLEAG 80 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G-~~VlVLE~G 80 (1183)
.++||||||+|++|+++|++|+++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 579999999999999999999998 8 999999993
No 75
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.69 E-value=2.3e-08 Score=120.88 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=40.8
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHH
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLML 348 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~ 348 (1183)
|...+++.|++|+++++|++|+.+++ +++||++.++. ++.|+. ||++++...+.+.|+-
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~----~~~gV~~~~g~---~~~ad~-VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGN----KIEAVHLEDGR---RFLTQA-VASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEETTSC---EEECSC-EEECCC----------
T ss_pred HHHHHHHhCCceeeecceeEEEeeCC----eEEEEEecCCc---EEEcCE-EEECCCHHHHHHHhcc
Confidence 33345567999999999999999988 99999876654 688986 9999998888766653
No 76
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.69 E-value=2.5e-08 Score=116.62 Aligned_cols=38 Identities=26% Similarity=0.478 Sum_probs=32.4
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
|+.++|+||||+|++|+++|..|++ .|++|+|||+++.
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~-~G~~V~llEk~~~ 61 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGK-RGRRVLVIDHARA 61 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCC
Confidence 3567999999999999999999999 5999999999974
No 77
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.66 E-value=5.4e-08 Score=107.93 Aligned_cols=36 Identities=36% Similarity=0.548 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|+.|++.+|.+|+|||+.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 468999999999999999999984489999999986
No 78
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.66 E-value=5.6e-08 Score=121.80 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|+.|+++ |++|+|||++.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 469999999999999999999998 99999999985
No 79
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.65 E-value=1.6e-07 Score=113.10 Aligned_cols=56 Identities=20% Similarity=0.151 Sum_probs=43.1
Q ss_pred ccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHHH
Q psy8892 285 IRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLLM 347 (1183)
Q Consensus 285 ~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LLl 347 (1183)
.+.+.|++|+++++|++|..++ ++.+|++.+ +++..+++|+. ||+|+|++ +..|+.
T Consensus 158 ~a~~~Gv~i~~~~~V~~l~~~~-----~~~~V~~~d~~~G~~~~i~A~~-VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 158 MVVRKGGEVLTRTRATSARREN-----GLWIVEAEDIDTGKKYSWQARG-LVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHTTCEEECSEEEEEEEEET-----TEEEEEEEETTTCCEEEEEESC-EEECCGGG-HHHHHH
T ss_pred HHHHcCCEEEcCcEEEEEEEeC-----CEEEEEEEECCCCCEEEEECCE-EEECCChh-HHHHHH
Confidence 3345699999999999998864 467888764 55556799986 99999987 566554
No 80
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.65 E-value=6.3e-08 Score=116.33 Aligned_cols=56 Identities=18% Similarity=0.278 Sum_probs=43.5
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQ 918 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~ 918 (1183)
.|...+++.|++|+++++|++|..++ +++.+|++.++. ++.| +.||+|+|+.....
T Consensus 225 ~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~---~i~A-d~VVlA~G~~s~~~ 280 (549)
T 3nlc_A 225 KMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGE---EIKS-RHVVLAVGHSARDT 280 (549)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSC---EEEC-SCEEECCCTTCHHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCC---EEEC-CEEEECCCCChhhH
Confidence 34444556799999999999999876 678898876443 5889 66999999976443
No 81
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.64 E-value=2e-07 Score=107.85 Aligned_cols=34 Identities=35% Similarity=0.561 Sum_probs=32.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 58999999999999999999998 99999999986
No 82
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.63 E-value=1.3e-07 Score=110.52 Aligned_cols=65 Identities=20% Similarity=0.289 Sum_probs=48.2
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCC
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGI 351 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGi 351 (1183)
..|...+++.|++|+.+++|++|..+++ +++||.+...+...+++|+. ||.|+|.. | .+....|+
T Consensus 106 ~~L~~~~~~~gv~i~~~~~v~~i~~~~~----~v~gv~~~~~~~~~~~~a~~-vV~A~G~~-s-~~~~~~g~ 170 (397)
T 3cgv_A 106 KHLAALAAKAGADVWVKSPALGVIKENG----KVAGAKIRHNNEIVDVRAKM-VIAADGFE-S-EFGRWAGL 170 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEETT----EEEEEEEEETTEEEEEEEEE-EEECCCTT-C-HHHHHHTC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEeCC----EEEEEEEEECCeEEEEEcCE-EEECCCcc-h-HhHHhcCC
Confidence 3444444457999999999999999876 89999988766667899974 88898865 4 44333344
No 83
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.63 E-value=5e-08 Score=122.26 Aligned_cols=35 Identities=26% Similarity=0.233 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|+||||+|++|+++|+.|++ .|++|+||||+.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQR-RGAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHT-TTCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 46899999999999999999999 699999999985
No 84
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.63 E-value=1.1e-07 Score=113.33 Aligned_cols=52 Identities=12% Similarity=0.266 Sum_probs=40.4
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccC
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLN 915 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~ 915 (1183)
|...+++.|+++++++.| +|+.++ +++.||.+...++ ++.| +.||+|+|++.
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g--~~~a-~~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGL--VEDV-DKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEE--ECCC-SEEEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCC--eEEe-eeEEECCCCCc
Confidence 334446789999999999 998876 7899998864322 4668 78999999975
No 85
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.63 E-value=2e-07 Score=108.91 Aligned_cols=68 Identities=13% Similarity=0.196 Sum_probs=51.4
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
...+|...+++.|++|+.+++|++|..++ ++++||.+...+...+++| +.||.|+|... .+....|+.
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a-~~vV~A~G~~s--~~~~~~g~~ 171 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRA-KMVIAADGFES--EFGRWAGLK 171 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEE-EEEEECCCTTC--HHHHHHTCC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEc-CEEEECCCcch--HhHHhcCCC
Confidence 33455555666899999999999999886 7899999977666778999 67888888654 444444554
No 86
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.62 E-value=7.2e-09 Score=120.57 Aligned_cols=37 Identities=32% Similarity=0.559 Sum_probs=34.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.++||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 44579999999999999999999998 99999999985
No 87
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.61 E-value=2.1e-07 Score=112.11 Aligned_cols=59 Identities=17% Similarity=0.186 Sum_probs=46.1
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHH
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLM 921 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~ 921 (1183)
|...+++.|++|+++++|++|..++ ++.+|++.+ +++..+|+| +.||+|+|++ +..++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A-~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQA-RGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEE-SCEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEEC-CEEEECCChh-HHHHHH
Confidence 3344556799999999999998864 577888764 466678999 6799999987 777766
No 88
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.61 E-value=1.8e-07 Score=111.58 Aligned_cols=48 Identities=15% Similarity=0.289 Sum_probs=37.9
Q ss_pred cCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCC
Q psy8892 286 RKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALN 341 (1183)
Q Consensus 286 ~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~ 341 (1183)
+++.|++|+.++.| +|+.+++ ++.||.+...++ .++++. ||+|+|++.
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~----~v~Gv~v~~~~g--~~~a~~-VVlAtGg~~ 176 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDG----KVTGFVTEKRGL--VEDVDK-LVLATGGYS 176 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETT----EEEEEEETTTEE--ECCCSE-EEECCCCCG
T ss_pred HHhCCCEEEECcEE-EEEEeCC----EEEEEEEEeCCC--eEEeee-EEECCCCCc
Confidence 35679999999999 9998876 899988754322 367875 999999874
No 89
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.60 E-value=2.5e-08 Score=116.01 Aligned_cols=61 Identities=13% Similarity=0.097 Sum_probs=44.2
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..|...+++.|++|+++++|++|..++ +++ +|+. .++ +++| +.||+|+|++ ++.++...|+
T Consensus 168 ~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~--~~g--~~~a-~~vV~A~G~~-s~~l~~~~~~ 228 (382)
T 1ryi_A 168 KAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKT--PSG--DVWA-NHVVVASGVW-SGMFFKQLGL 228 (382)
T ss_dssp HHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEE--TTE--EEEE-EEEEECCGGG-THHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEc--CCc--eEEc-CEEEECCChh-HHHHHHhcCC
Confidence 344455566799999999999998876 455 5544 233 6888 6799999986 6677766554
No 90
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.60 E-value=2.1e-07 Score=107.72 Aligned_cols=35 Identities=34% Similarity=0.543 Sum_probs=32.7
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
++|+||||+|++|+++|+.|++ .|++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~-~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR-AGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH-TTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCC
Confidence 5899999999999999999999 5999999999863
No 91
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.59 E-value=1.4e-07 Score=109.92 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=45.8
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcH
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSP 917 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp 917 (1183)
..+|...+++.|++++.+++|+.+..++ +++++|....+++..+++| +-||-|.| .+|.
T Consensus 105 ~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a-~~vIgAdG-~~S~ 163 (397)
T 3oz2_A 105 DKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRA-KMVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEE-EEEEECCC-TTCH
T ss_pred HHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEE-eEEEeCCc-cccH
Confidence 3455555667899999999999999887 7899999888888889999 64555555 5554
No 92
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.59 E-value=1.2e-07 Score=105.03 Aligned_cols=37 Identities=38% Similarity=0.595 Sum_probs=33.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+++|..|++.+|++|+|||+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 4689999999999999999999922999999999863
No 93
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.58 E-value=1.8e-07 Score=108.99 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=33.9
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+.+||+||||+|++|+++|..|++ .|.+|+|||+++.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~-~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKK 38 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 357999999999999999999999 5999999999963
No 94
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.49 E-value=3.2e-07 Score=102.58 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=33.0
Q ss_pred ccceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~ 691 (1183)
.+||+||||+|++|+++|+.|++. +|++|+|||++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 479999999999999999999993 499999999996
No 95
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.49 E-value=1.8e-07 Score=110.39 Aligned_cols=56 Identities=23% Similarity=0.309 Sum_probs=43.8
Q ss_pred hhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHH
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLL 346 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LL 346 (1183)
|...+++.|++|+++++|++|..+++ +++||++ +++ +++|+. ||+|+++..+.+||
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~----~~~gv~~--~g~--~~~ad~-VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG----KAAGIIA--DDR--IHDADL-VISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEE--TTE--EEECSE-EEECSCHHHHHHHT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC----EEEEEEE--CCE--EEECCE-EEECCCHHHHHHhc
Confidence 33344566899999999999999887 8988876 243 688985 99999988776654
No 96
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.47 E-value=5.2e-07 Score=107.33 Aligned_cols=56 Identities=13% Similarity=0.202 Sum_probs=43.8
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCC
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALN 341 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~ 341 (1183)
.|...+.+.|++|+.+++|++|..+++ +++||++.. +|+..+++|+. ||.|.|+..
T Consensus 105 ~L~~~a~~~gv~i~~~~~v~~i~~~~~----~v~gv~~~~~~~G~~~~~~ad~-VV~AdG~~s 162 (453)
T 3atr_A 105 RVLKEAQDRGVEIWDLTTAMKPIFEDG----YVKGAVLFNRRTNEELTVYSKV-VVEATGYSR 162 (453)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEETT----EEEEEEEEETTTTEEEEEECSE-EEECCGGGC
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEEECC----EEEEEEEEEcCCCceEEEEcCE-EEECcCCch
Confidence 343344457999999999999998877 899998875 56666799985 999999753
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.47 E-value=8.6e-07 Score=103.19 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++|||||||+|++|+++|+.|++. |.+|+|||+++
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~ 37 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGK 37 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 469999999999999999999998 99999999986
No 98
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.46 E-value=3.4e-07 Score=108.02 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=46.0
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLM 921 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~ 921 (1183)
.|...+++.|++|+++++|++|..++ ++++||++. ++ +++| +.||+|+++..+.+||.
T Consensus 201 ~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~--g~--~~~a-d~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 201 ALETVISANGGKIHTGQEVSKILIEN--GKAAGIIAD--DR--IHDA-DLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEET--TE--EEEC-SEEEECSCHHHHHHHTT
T ss_pred HHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEEC--CE--EEEC-CEEEECCCHHHHHHhcC
Confidence 34445567799999999999999987 789998763 33 6888 67999999988877653
No 99
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.45 E-value=1.3e-07 Score=113.76 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+.+|+.||+. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 479999999999999999999998 99999999974
No 100
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.44 E-value=1.3e-06 Score=97.53 Aligned_cols=36 Identities=33% Similarity=0.514 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|+.|++. +|++|+|||+++
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 368999999999999999999984 589999999986
No 101
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.42 E-value=4.8e-07 Score=110.39 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=43.7
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCC
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGAL 340 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai 340 (1183)
..|...+++.|++|+.+++|++|..+++ .+++|.+.++|+..+++|+. ||.|+|..
T Consensus 132 ~~L~~~a~~~Gv~i~~g~~V~~v~~~~g----~~~~V~~~~~G~~~~i~Adl-VV~AdG~~ 187 (591)
T 3i3l_A 132 KLLLDEARSRGITVHEETPVTDVDLSDP----DRVVLTVRRGGESVTVESDF-VIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEECCST----TCEEEEEEETTEEEEEEESE-EEECCGGG
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCC----CEEEEEEecCCceEEEEcCE-EEECCCCc
Confidence 3444444557999999999999998755 67788887677667899985 99999973
No 102
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.39 E-value=6.5e-07 Score=106.49 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=45.3
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLN 915 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~ 915 (1183)
..|...+++.|++|+++++|++|..++ ++++||++.. +++..+++| +-||.|+|+..
T Consensus 104 ~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~a-d~VV~AdG~~s 162 (453)
T 3atr_A 104 QRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYS-KVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEEC-SEEEECCGGGC
T ss_pred HHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEc-CEEEECcCCch
Confidence 344455556899999999999999876 6899998875 566678999 77999999764
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.38 E-value=1.8e-07 Score=113.03 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+.+|+.||+. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 579999999999999999999998 99999999974
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.37 E-value=2.2e-07 Score=111.81 Aligned_cols=53 Identities=23% Similarity=0.451 Sum_probs=40.3
Q ss_pred hhhhhhcC-CCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCc
Q psy8892 857 FIRPIRKR-HNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNS 916 (1183)
Q Consensus 857 ~L~~~~~~-~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~t 916 (1183)
.|...+++ +|++| .++.|++|..++ +++.||.+.++ .+++| +.||+|+|++..
T Consensus 128 ~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG---~~i~A-daVVLATG~~s~ 181 (637)
T 2zxi_A 128 YMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLG---VEYKT-KAVVVTTGTFLN 181 (637)
T ss_dssp HHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTS---CEEEC-SEEEECCTTCBT
T ss_pred HHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCC---cEEEe-CEEEEccCCCcc
Confidence 44444555 79999 478999999876 68999987643 26889 789999998743
No 105
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.36 E-value=7.5e-07 Score=104.64 Aligned_cols=48 Identities=17% Similarity=0.286 Sum_probs=37.3
Q ss_pred ccccccccccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 646 NIVQDTKIFEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 646 ~~~~np~~~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
....|...|+++||+||||+|.+|+++|+.|++ .|++|+||||++..+
T Consensus 9 ~~~~~~~~~~~~~dv~iiG~G~~g~~~a~~l~~-~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 9 SGRENLYFQGEHYDVIILGTGLKECILSGLLSH-YGKKILVLDRNPYYG 56 (475)
T ss_dssp --------CCCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred ccccccccccccCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeccCCCC
Confidence 345577777889999999999999999999999 699999999998654
No 106
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.36 E-value=1.6e-06 Score=105.88 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=46.1
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCcc
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTL 914 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~ 914 (1183)
...+|...+++.|++++.+++|++|..++ +.+++|.+..+++..+++| +-||.|+|..
T Consensus 130 l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~A-dlVV~AdG~~ 187 (591)
T 3i3l_A 130 FDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVES-DFVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEE-SEEEECCGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEc-CEEEECCCCc
Confidence 34456556667899999999999999874 5678888876676778999 7799999974
No 107
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.35 E-value=6.5e-07 Score=109.55 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=51.3
Q ss_pred HHHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-----CCeE-------EEEEeccEEEEccCccCcH--H
Q psy8892 853 ASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-----NRKS-------YTVKCRKEVILSAGTLNSP--Q 918 (1183)
Q Consensus 853 ~~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-----~~~~-------~~i~A~k~VILAaGa~~tp--~ 918 (1183)
....+|...+++.|++|+.++.|++|+.+++ ++++||.+.+ +++. .+++| +.||+|.|+...- +
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~A-d~VV~AdG~~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHA-KVTIFAEGCHGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEEC-SEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEEC-CEEEEeeCCCchHHHH
Confidence 3444565656667999999999999998764 6899998763 3332 47899 7899999988653 4
Q ss_pred HHHHcCCC
Q psy8892 919 LLMLSGVG 926 (1183)
Q Consensus 919 lL~~SGIG 926 (1183)
++...|+.
T Consensus 223 l~~~~gl~ 230 (584)
T 2gmh_A 223 LYKKFDLR 230 (584)
T ss_dssp HHHHTTTT
T ss_pred HHHHhCCC
Confidence 44444553
No 108
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.34 E-value=1.2e-06 Score=105.95 Aligned_cols=57 Identities=25% Similarity=0.352 Sum_probs=44.5
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-CCeEEEEEeCcEEEEcCCCCC
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NKQRHTVRARKEVILSAGALN 341 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-~g~~~~i~A~k~VILAAGai~ 341 (1183)
..|...+++.|++|+.+++|++|..+++ +++||.+.. +|+..+++|+. ||.|+|...
T Consensus 115 ~~L~~~a~~~Gv~i~~~~~V~~v~~~~~----~v~gv~~~~~dG~~~~i~ad~-VI~AdG~~S 172 (512)
T 3e1t_A 115 DMLLRNSERKGVDVRERHEVIDVLFEGE----RAVGVRYRNTEGVELMAHARF-IVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEEETT----EEEEEEEECSSSCEEEEEEEE-EEECCCTTC
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEECC----EEEEEEEEeCCCCEEEEEcCE-EEECCCcch
Confidence 3444444457999999999999999877 899998875 45556799975 999999753
No 109
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.34 E-value=1.5e-06 Score=105.04 Aligned_cols=59 Identities=14% Similarity=0.287 Sum_probs=46.7
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccC
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLN 915 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~ 915 (1183)
...+|...+++.|++|+.+++|++|..++ ++++||++.. +++..+++| +-||.|+|...
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~a-d~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHA-RFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEE-EEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEc-CEEEECCCcch
Confidence 34455555666899999999999999876 7899999875 455578999 77999999764
No 110
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.33 E-value=1.6e-06 Score=96.52 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=33.3
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCC--CCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENP--NWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~--G~~VlvLE~G~~ 692 (1183)
..++|++|||+|++|+++|..|++ . |++|+|+|+.+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~-~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHh-cCCCCeEEEEecCcc
Confidence 346899999999999999999998 5 999999999863
No 111
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.32 E-value=3.2e-07 Score=110.91 Aligned_cols=36 Identities=28% Similarity=0.406 Sum_probs=33.3
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+.+||+||||+|+||+.+|..|++ .|++|+|||++.
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 61 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAAR-MGQQTLLLTHNI 61 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHh-CCCCEEEEeecc
Confidence 357999999999999999999999 699999999984
No 112
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.26 E-value=5e-06 Score=97.80 Aligned_cols=35 Identities=31% Similarity=0.604 Sum_probs=32.8
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|+||||+|++|+++|+.|++ .|++|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK-SGFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 46999999999999999999999 699999999995
No 113
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.26 E-value=3.7e-06 Score=98.94 Aligned_cols=35 Identities=29% Similarity=0.588 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|+.|++. |.+|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 359999999999999999999998 99999999985
No 114
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.26 E-value=1.8e-06 Score=105.57 Aligned_cols=59 Identities=12% Similarity=0.225 Sum_probs=43.0
Q ss_pred hhhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe-----CCeE-------EEEEeCcEEEEcCCCCCC
Q psy8892 280 AFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-----NKQR-------HTVRARKEVILSAGALNS 342 (1183)
Q Consensus 280 ~~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~-----~g~~-------~~i~A~k~VILAAGai~s 342 (1183)
.+|...+++.|++|+.++.|++|+.++++ +++||.+.+ +|+. .+++|+. ||+|.|+...
T Consensus 148 ~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g---~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~-VV~AdG~~S~ 218 (584)
T 2gmh_A 148 SWMGEQAEALGVEVYPGYAAAEILFHEDG---SVKGIATNDVGIQKDGAPKTTFERGLELHAKV-TIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEEECTTS---SEEEEEECCEEECTTSCEEEEEECCCEEECSE-EEECCCTTCH
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcCCC---CEEEEEeCCccccCCCCcccccCCceEEECCE-EEEeeCCCch
Confidence 34444444569999999999999987643 788888753 3322 4689974 9999998754
No 115
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.25 E-value=1.6e-06 Score=98.63 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|+.|+++ |.+|+||||.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 47999999999999999999998 99999999986
No 116
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.24 E-value=3.6e-06 Score=99.03 Aligned_cols=33 Identities=30% Similarity=0.520 Sum_probs=31.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
||||||||++|+++|++|+++ |++|+||||.+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 899999999999999999998 999999999864
No 117
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.23 E-value=1.8e-06 Score=104.30 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=33.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
...+|||||||+|++|+.+|+.||+. |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 44579999999999999999999998 99999999874
No 118
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.23 E-value=3.9e-06 Score=100.73 Aligned_cols=39 Identities=28% Similarity=0.379 Sum_probs=35.2
Q ss_pred cCCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 42 KSFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 42 ~~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..++.++||||||+|++|+++|+.|++. |.+|+||||.+
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 44 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLV 44 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 4567789999999999999999999998 99999999986
No 119
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.21 E-value=2.1e-06 Score=91.89 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+.+|..|++. |.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 369999999999999999999998 99999999984
No 120
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.21 E-value=4.3e-06 Score=92.92 Aligned_cols=36 Identities=31% Similarity=0.484 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
.++||+|||+|++|+++|+.|++. +|++|+|+|+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 468999999999999999999984 489999999986
No 121
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.18 E-value=3.7e-07 Score=106.87 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|+.|+++ +|++|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 359999999999999999999984 489999999985
No 122
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.17 E-value=3.2e-06 Score=98.86 Aligned_cols=35 Identities=37% Similarity=0.600 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCC--CCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENP--NWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~--G~~VlvLE~G~ 691 (1183)
.++|+||||+|++|+++|+.|++ . |++|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~-~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQ-LAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHh-cCCCCeEEEEeCCC
Confidence 45999999999999999999999 6 99999999985
No 123
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.16 E-value=2.2e-06 Score=97.79 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~ 81 (1183)
+||+|||+|++|+++|+.|++ . |++|+|+||++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCC
Confidence 599999999999999999999 7 99999999986
No 124
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.15 E-value=4.2e-06 Score=98.76 Aligned_cols=34 Identities=50% Similarity=0.663 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
|||||||+|++|+++|++|+++ |++|+|||+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCC
Confidence 7999999999999999999999 999999999754
No 125
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.15 E-value=3e-06 Score=96.96 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.1
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+++|..|++ .|++|+|+|+.+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~vie~~~~ 37 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR-SGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-SSCCEEEECCSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 36899999999999999999999 5999999999863
No 126
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.15 E-value=1.7e-05 Score=96.31 Aligned_cols=69 Identities=12% Similarity=0.166 Sum_probs=45.9
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEE--EEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGV--EFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV--~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
...+|...+++.|++|+.+++|++|..+++ +++.+| .+.++++..+++| +-||.|.|+.. ++-..-||.
T Consensus 122 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a-~~vV~AdG~~S--~vR~~lgi~ 192 (535)
T 3ihg_A 122 LEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRA-GYLVGADGNRS--LVRESLGIG 192 (535)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEE-EEEEECCCTTC--HHHHHTTCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEe-CEEEECCCCcc--hHHHHcCCC
Confidence 344555555566999999999999998763 333333 4444444678999 77888888764 343444554
No 127
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.14 E-value=3.1e-06 Score=99.58 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=42.3
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLM 921 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~ 921 (1183)
.|...+++.|++|+++++|++|..++ +++ | ..+++ ++.| +.||+|+|...+++||-
T Consensus 194 ~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V--~~~g~--~~~a-d~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 194 ELERIIMENKGKILTRKEVVEINIEE--KKV--Y--TRDNE--EYSF-DVAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHHHHTTTCEEESSCCEEEEETTT--TEE--E--ETTCC--EEEC-SEEEECSCHHHHHHHHC
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--E--EeCCc--EEEe-CEEEECCCHHHHHHhcC
Confidence 34455667899999999999998876 555 4 33343 6888 67999999988887663
No 128
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.14 E-value=2.6e-05 Score=94.65 Aligned_cols=35 Identities=40% Similarity=0.577 Sum_probs=33.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|+.|++. |.+|+||||.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 469999999999999999999998 99999999986
No 129
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.12 E-value=4e-06 Score=101.36 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=32.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+||+||||+|+||+.+|..|++ .|.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVAR-GGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHH-CCCcEEEEEecc
Confidence 457999999999999999999999 699999999984
No 130
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.11 E-value=9.1e-06 Score=86.93 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=32.5
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|++|+.+|..|++ .|.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~-~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 36899999999999999999999 599999999984
No 131
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.10 E-value=6.6e-06 Score=98.67 Aligned_cols=37 Identities=32% Similarity=0.501 Sum_probs=33.5
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.++||||||+|++|+++|+.|++. |.+|+||||.+
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 45 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLP 45 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 45679999999999999999999998 99999999986
No 132
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.09 E-value=2.2e-06 Score=98.19 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=32.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|||||||+|++|+++|..|++. |++|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 58999999999999999999998 99999999986
No 133
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.08 E-value=2.3e-05 Score=93.93 Aligned_cols=38 Identities=32% Similarity=0.446 Sum_probs=34.8
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
++.++|+||||+|++|+++|..|++ .|++|+||||.+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-AGVEVVVLERLVE 45 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 4668999999999999999999999 6999999999863
No 134
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.04 E-value=8.9e-06 Score=92.71 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=31.5
Q ss_pred ceEEeeCCCchHHHHHHHHhcC--CCCeEEEEcCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTEN--PNWTVLLLEAGRE 692 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~--~G~~VlvLE~G~~ 692 (1183)
+|++|||+|++|+++|+.|++. .|++|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 5999999999999999999981 3999999999863
No 135
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.01 E-value=2.3e-05 Score=95.35 Aligned_cols=36 Identities=33% Similarity=0.400 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
.+|||||||+|++|+++|+.|++. |.+|+||||.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 469999999999999999999999 999999999863
No 136
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.00 E-value=7.1e-05 Score=84.11 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=50.5
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
++..+.++.|+++++++.|++|..+ +++.+|++.+ +++..++.+ +.||+|+|.--+..+|..+|+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNV-NGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEECCHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEc-CEEEEEECCCCChhHHhhcCe
Confidence 3444555679999999999999765 4678888875 355667888 689999998777678877776
No 137
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.00 E-value=1.5e-05 Score=96.90 Aligned_cols=36 Identities=31% Similarity=0.394 Sum_probs=31.3
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+++|+.|++ .|++|+||||.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~-~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA-GGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-TTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEcCCCC
Confidence 47999999999999999999999 6999999999863
No 138
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.99 E-value=9.4e-06 Score=92.16 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=32.5
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
++|+||||+|++|+++|+.|++ .|++|+||||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH-CCCcEEEEECCCC
Confidence 4799999999999999999999 6999999999863
No 139
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.99 E-value=3.6e-05 Score=92.25 Aligned_cols=37 Identities=30% Similarity=0.449 Sum_probs=33.5
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+.++|+||||+|++|+++|..|++ .|++|+||||.+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL-GGVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 457999999999999999999999 6999999999863
No 140
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.98 E-value=6.6e-06 Score=95.84 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|+.|++. |.+|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 48999999999999999999998 99999999985
No 141
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.97 E-value=7.3e-06 Score=98.27 Aligned_cols=36 Identities=28% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
...+||+|||+|++|+++|..|++. |.+|+|||+.+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~ 125 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRI 125 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 3568999999999999999999998 99999999986
No 142
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.95 E-value=4.1e-06 Score=91.92 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
++||+|||||++|+++|+.|+++ |++|+||||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 48999999999999999999999 999999999864
No 143
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.95 E-value=7.5e-05 Score=87.46 Aligned_cols=66 Identities=18% Similarity=0.288 Sum_probs=52.2
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
..++....++.|+++++++.|++|..++ +++++|++.++. ++.| +.||+|+|..-+..+|..+|+-
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~---~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGS---VIPA-DIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSC---EEEC-SEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCC---EEEc-CEEEECCCCccChHHHHhCCCC
Confidence 3445556677899999999999998765 688899886543 6788 6799999988777788888773
No 144
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.92 E-value=3.6e-05 Score=91.18 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC--EEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW--TVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~--~VlVLE~G~~ 82 (1183)
..+||+|||+|++|+++|..|++. |. +|+|+|+.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCC
Confidence 468999999999999999999998 99 9999999863
No 145
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.92 E-value=4.8e-05 Score=89.13 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=50.6
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCCC
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIGP 353 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig~ 353 (1183)
.+....++.|++|++++.|++|..+++ ++++|++.++. ++.++. ||+|+|..-...+|..+|+..
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~v~l~dG~---~i~aD~-Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGDGT----KVTGVRMQDGS---VIPADI-VIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEESSS----BEEEEEESSSC---EEECSE-EEECSCCEESCHHHHHTTCCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEecCC----cEEEEEeCCCC---EEEcCE-EEECCCCccChHHHHhCCCCc
Confidence 444455567999999999999988766 88888875543 688985 999999877767887777753
No 146
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.91 E-value=3.4e-05 Score=91.97 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=33.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC------CEEEEEcCcCCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSN------WTVLLLEAGPEE 83 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G------~~VlVLE~G~~~ 83 (1183)
.+||||||+|++|+++|++|+++ | ++|+|||+.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCC
Confidence 48999999999999999999998 8 999999998653
No 147
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.90 E-value=1.8e-05 Score=92.18 Aligned_cols=35 Identities=29% Similarity=0.550 Sum_probs=32.8
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|+||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGR-QGHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 36899999999999999999999 699999999985
No 148
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.90 E-value=1.9e-05 Score=92.11 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|+.|++. |.+|+|||+.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 58999999999999999999998 99999999985
No 149
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.90 E-value=3.2e-05 Score=95.70 Aligned_cols=53 Identities=15% Similarity=0.412 Sum_probs=39.9
Q ss_pred cccccccccccccccc--ccccceEEeeCCCchHHHHHHHHhc-CCCCeEEEEcCCC
Q psy8892 638 KDAILTPSNIVQDTKI--FEKEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLEAGR 691 (1183)
Q Consensus 638 ~D~s~~p~~~~~np~~--~~~~~D~VVIGsG~aG~~~A~~Lae-~~G~~VlvLE~G~ 691 (1183)
-|..+.|......|.+ +..++|+||||+|++|+++|..|++ . |++|+||||.+
T Consensus 11 ~~~~~~~~~~~~~~~m~~~~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 11 GNPLIAPASPLAPAHTEAVPSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp SCTTSCCCCTTSCCCCSSCCSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCCCCcccCCCccccCCCCCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3444444444333332 2357999999999999999999998 6 99999999985
No 150
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.88 E-value=4.7e-06 Score=100.70 Aligned_cols=36 Identities=31% Similarity=0.435 Sum_probs=33.0
Q ss_pred ccceEEeeCCCchHHHHHHHHh-cCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLT-ENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~La-e~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+.+|.+|+ + .|.+|+|||+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCC
Confidence 4689999999999999999999 7 6999999999863
No 151
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.87 E-value=1.3e-05 Score=99.22 Aligned_cols=38 Identities=21% Similarity=0.434 Sum_probs=34.8
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhc-CCCCEEEEEcCcC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTE-NSNWTVLLLEAGP 81 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~-~~G~~VlVLE~G~ 81 (1183)
.+.+++||||||+|++|+++|+.|++ . |.+|+||||.+
T Consensus 28 ~~~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 28 AVPSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp SCCSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 34567999999999999999999999 8 99999999986
No 152
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.87 E-value=1.8e-05 Score=91.12 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
++||+|||+|++|+++|.+|++. |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 58999999999999999999998 99 999999985
No 153
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.87 E-value=9.1e-06 Score=97.41 Aligned_cols=35 Identities=29% Similarity=0.300 Sum_probs=32.9
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+|++|||+|++|+++|..|++ .|++|+|||+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-LGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 46899999999999999999999 699999999986
No 154
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.87 E-value=6.6e-05 Score=87.37 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+||+|||+|++|+++|..|++. |.+|+|+|+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 358999999999999999999998 99999999986
No 155
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.86 E-value=1.4e-05 Score=96.91 Aligned_cols=36 Identities=33% Similarity=0.543 Sum_probs=33.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..++||||||+|++|+.+|.+|++. |.+|+|||+++
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 4569999999999999999999997 99999999986
No 156
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.84 E-value=0.0001 Score=87.78 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-----CEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN-----WTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G-----~~VlVLE~G~~ 82 (1183)
+.|||||||+|++|+++|..|++. | .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCC
Confidence 468999999999999999999998 8 99999999873
No 157
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.83 E-value=1.2e-05 Score=97.31 Aligned_cols=37 Identities=32% Similarity=0.504 Sum_probs=33.4
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
..++|+||||+|++|+.+|.+|++ .|++|+|||+++.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS-QGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 457899999999999999999999 6999999999863
No 158
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.82 E-value=8.8e-06 Score=94.74 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=32.1
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
++|+||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 5899999999999999999999 699999999985
No 159
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.81 E-value=2.8e-05 Score=94.02 Aligned_cols=36 Identities=36% Similarity=0.473 Sum_probs=33.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+.+|.+|++ .|++|+|||+++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-~g~~v~iiE~~~~ 43 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-AGMKVLGIEAGED 43 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 46899999999999999999999 6999999999863
No 160
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.81 E-value=4.9e-05 Score=86.10 Aligned_cols=60 Identities=7% Similarity=0.123 Sum_probs=46.0
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
+..+.++.|+++++++.|.+|..++ +++++|++.+ +++..++.+ +.||+|+|.-.++.++
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPV-SGLFYAIGHTPATKIV 276 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEEC-SEEEECSCEEECCGGG
T ss_pred HHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEe-CEEEEEeCCCCChhHh
Confidence 3334455699999999999998776 6788999876 455668888 6899999976555544
No 161
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.80 E-value=1e-05 Score=88.72 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=33.2
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
++||+|||+|++|+++|+.|++ .|++|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~-~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 5899999999999999999999 69999999998643
No 162
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.80 E-value=3.8e-05 Score=93.25 Aligned_cols=37 Identities=35% Similarity=0.437 Sum_probs=34.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
...++||||||+|++|+++|.+|++. |.+|+|||+++
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 49 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAG 49 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 34579999999999999999999998 99999999986
No 163
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.79 E-value=0.0001 Score=87.73 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=40.5
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEE--eeC-CeEEEEEeccEEEEccCc
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEF--SKN-RKSYTVKCRKEVILSAGT 913 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~--~~~-~~~~~i~A~k~VILAaGa 913 (1183)
..|+...+++.++.++++++|++|..++++++..++.+ .++ ++..++.+ +.||+|+|+
T Consensus 130 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~-d~lVlAtG~ 190 (463)
T 3s5w_A 130 NDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT-RALVVSPGG 190 (463)
T ss_dssp HHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE-SEEEECCCC
T ss_pred HHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe-CEEEECCCC
Confidence 34666666777899999999999987632234443444 343 44557889 679999997
No 164
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.79 E-value=6.3e-05 Score=86.46 Aligned_cols=34 Identities=32% Similarity=0.490 Sum_probs=32.0
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCC-eEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNW-TVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~-~VlvLE~G~ 691 (1183)
++|+||||+|++|+++|..|++ .|. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-FGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-cCCCcEEEEecCC
Confidence 6899999999999999999999 599 999999985
No 165
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.78 E-value=7.9e-05 Score=84.12 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+||||||+|++|+++|+.|++. |++|+|||+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCC
Confidence 58999999999999999999998 99999999986
No 166
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.78 E-value=0.00016 Score=83.97 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+|++|||+|++|+++|..|++ .|++|+|+|+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 36899999999999999999999 699999999985
No 167
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.78 E-value=1.1e-05 Score=90.62 Aligned_cols=34 Identities=24% Similarity=0.548 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||||+||+++|.+|++. |++|+|+|++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 79999999999999999999998 99999999975
No 168
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.78 E-value=7.5e-05 Score=88.99 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=33.5
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCC------CeEEEEcCCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPN------WTVLLLEAGREES 694 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G------~~VlvLE~G~~~~ 694 (1183)
.+|+||||+|++|+++|++|++ .| ++|+|||+.+..+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~-~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEK-EIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-hccccCCCCCEEEEECCCCCC
Confidence 5899999999999999999999 58 9999999986543
No 169
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.77 E-value=1.1e-05 Score=90.19 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=32.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3679999999999999999999998 99999999975
No 170
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.77 E-value=6.2e-05 Score=89.13 Aligned_cols=37 Identities=30% Similarity=0.343 Sum_probs=33.4
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCC--eEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNW--TVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~--~VlvLE~G~~~ 693 (1183)
..+|++|||+|++|+++|..|++ .|. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-EKAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCCCeEEEecCCCC
Confidence 46899999999999999999999 599 99999998643
No 171
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.76 E-value=1.9e-05 Score=95.91 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=33.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
..++|+||||+|++|+.+|.+|++ .|++|+|||+++.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 347999999999999999999999 5999999999864
No 172
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.76 E-value=1.2e-05 Score=90.30 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=33.9
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
|++.|||||||+|+||+++|.+|++. |++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 56679999999999999999999998 99999999975
No 173
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.75 E-value=2.7e-05 Score=94.04 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHh-cCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLT-ENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA-~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|.+|+ +. |.+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCC
Confidence 3689999999999999999999 76 99999999986
No 174
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.75 E-value=5.1e-05 Score=90.16 Aligned_cols=63 Identities=11% Similarity=0.209 Sum_probs=43.0
Q ss_pred hhhhcccCCCCeE--EEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHH
Q psy8892 280 AFLRPIRKRPNLK--VAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLL 346 (1183)
Q Consensus 280 ~~l~~~~~~~g~~--i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LL 346 (1183)
.++...+++.|++ |+.+++|++|..+++++ ...|++.+ +++..++.++. ||+|+|.+..|++.
T Consensus 105 ~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~---~~~V~~~~~~~g~~~~~~~d~-VVvAtG~~s~p~~p 171 (464)
T 2xve_A 105 DYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ---TFTVTVQDHTTDTIYSEEFDY-VVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHHTCGGGEECSEEEEEEEEETTTT---EEEEEEEETTTTEEEEEEESE-EEECCCSSSSBCCC
T ss_pred HHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC---cEEEEEEEcCCCceEEEEcCE-EEECCCCCCCCccC
Confidence 3444444445677 89999999998876532 22355544 35556788986 99999988788654
No 175
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.74 E-value=0.00031 Score=81.87 Aligned_cols=65 Identities=18% Similarity=0.383 Sum_probs=51.8
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
.++....++.|+++++++.|++|..++ +++++|++.++. ++.| +.||+|+|..-+..++..+|+-
T Consensus 188 ~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~---~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 188 SYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGN---TLPC-DLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSC---EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCC---EEEc-CEEEECcCCccCHHHHHhCCCC
Confidence 345556677899999999999998776 688898876543 6788 7799999988777788888773
No 176
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.74 E-value=0.00014 Score=88.35 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+++|..|++. |.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 368999999999999999999998 99999999986
No 177
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.73 E-value=0.00014 Score=83.96 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=32.7
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.+|+||||+|++|+++|..|++ .|++|+|||+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~-~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCC
Confidence 6899999999999999999999 6999999999863
No 178
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00014 Score=83.29 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=33.0
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
|+..+|+||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 47 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGM-NNISCRIIESMP 47 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 3457999999999999999999999 699999999985
No 179
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.68 E-value=0.00017 Score=87.57 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=33.3
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+++|..|++ .|.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~-~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH-RQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 46899999999999999999999 6999999999863
No 180
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.68 E-value=0.00014 Score=82.13 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=32.3
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+|+||||+|++|+++|..|++ .|++|+|+|+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-RQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCC
Confidence 5899999999999999999999 699999999986
No 181
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.65 E-value=2.6e-05 Score=92.40 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=37.0
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI 84 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~ 84 (1183)
.|..++||||||||++|+++|+.|+++ |++|+|||+.+...
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYG 47 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 456789999999999999999999998 99999999997643
No 182
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.65 E-value=0.00016 Score=90.52 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=33.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
..+||||||+|++|+++|+.|++. |++|+|||+.+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~ 370 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDR 370 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccc
Confidence 468999999999999999999998 999999999864
No 183
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.65 E-value=0.0003 Score=81.90 Aligned_cols=65 Identities=15% Similarity=0.343 Sum_probs=50.5
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCCC
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIGP 353 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig~ 353 (1183)
.+....++.|++|++++.|++|..+++ ++++|++.++. ++.++. ||+|+|..-+..++..+|+..
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~V~~~dG~---~i~aD~-Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAEGD----RVTGVVLSDGN---TLPCDL-VVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEETTSC---EEECSE-EEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHhCCcEEEECCEEEEEEecCC----cEEEEEeCCCC---EEEcCE-EEECcCCccCHHHHHhCCCCC
Confidence 344445567999999999999988776 88888775443 688985 999999876667887777753
No 184
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.64 E-value=0.00015 Score=87.64 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++||||||+|++|+.+|.+|++. |.+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 469999999999999999999997 99999999986
No 185
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.62 E-value=2.4e-05 Score=87.50 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=32.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+++||+||||+|+||++||.+|++ .|++|+|+|++..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar-~g~~v~lie~~~~ 40 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR-ARKQIALFDNNTN 40 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSCC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 458999999999999999999999 6999999999753
No 186
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.62 E-value=2.7e-05 Score=88.07 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhc-CCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTE-NSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~-~~G~~VlVLE~G~~ 82 (1183)
.++||+|||||++|+++|++|++ +.|++|+|+|+++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 36899999999999999999985 34999999999863
No 187
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.61 E-value=3.4e-05 Score=88.62 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=34.5
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
|..++||||||+|++|+++|++|+++ |++|+|||+..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccC
Confidence 55679999999999999999999998 99999999985
No 188
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.60 E-value=2.6e-05 Score=87.50 Aligned_cols=35 Identities=29% Similarity=0.532 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|+||+++|.+|++ .|++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~-~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR-ANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 37999999999999999999999 699999999975
No 189
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.60 E-value=0.00023 Score=79.44 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.4
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
+||+||||+|++|+++|..|++ .|++|+|+|+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR-KGIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 4899999999999999999999 69999999863
No 190
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.60 E-value=2.6e-05 Score=94.20 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=34.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEII 85 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~~ 85 (1183)
++||||||||++||++|++|+++.|++|+|||+.+...+
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 699999999999999999999844999999999986543
No 191
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.59 E-value=0.00031 Score=83.37 Aligned_cols=68 Identities=12% Similarity=0.297 Sum_probs=46.3
Q ss_pred hhhhhhhcCCCcE--EEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLK--VAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~--i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.|+...+++.|++ |+.++.|++|..++++++ ..|++.+ +++..++.+ +.||+|+|.+..|.+....|+
T Consensus 105 ~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~-d~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 105 DYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEF-DYVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp HHHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEE-SEEEECCCSSSSBCCCCCBTT
T ss_pred HHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEc-CEEEECCCCCCCCccCCCCCc
Confidence 4555555556777 899999999988763222 3455544 255567888 679999998888876544444
No 192
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.58 E-value=3.5e-05 Score=87.10 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=33.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhc-CCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae-~~G~~VlvLE~G~~~ 693 (1183)
.++|++|||+|+||++||++|++ +.|++|+|+||++..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 47899999999999999999985 369999999998643
No 193
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.56 E-value=3e-05 Score=87.00 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=33.7
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
|...||+||||+|+||++||.+|++ .|++|+|+|+...
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~-~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGR-SSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCC
Confidence 4456999999999999999999999 6999999999753
No 194
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.54 E-value=4.3e-05 Score=89.32 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=33.0
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
...+.|||||||+|++|+++|+.|+++ |.+|+||||.+
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 345679999999999999999999999 99999999986
No 195
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.53 E-value=4.2e-05 Score=89.79 Aligned_cols=43 Identities=26% Similarity=0.457 Sum_probs=36.7
Q ss_pred cccCCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 40 DLKSFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 40 ~~~~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
....|.++|||||||+|.+|+++|+.|+++ |++|+|||+++..
T Consensus 13 ~~~~~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 13 NLYFQGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYY 55 (475)
T ss_dssp ----CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred ccccccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCC
Confidence 344677889999999999999999999998 9999999999754
No 196
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.53 E-value=3.3e-05 Score=93.29 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=35.0
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL 695 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~ 695 (1183)
.+|+||||||++||+||++|++..|++|+||||.+..++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 799999999999999999999734999999999987654
No 197
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.48 E-value=5.3e-05 Score=89.76 Aligned_cols=41 Identities=22% Similarity=0.388 Sum_probs=36.8
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL 695 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~ 695 (1183)
|+.++|+||||+|++|+++|.+|++ .|++|+||||.+..++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~-~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCCCCCc
Confidence 3467999999999999999999999 6999999999987653
No 198
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.47 E-value=0.00062 Score=81.05 Aligned_cols=63 Identities=19% Similarity=0.282 Sum_probs=46.1
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..+....++.|+++++++.|++|..++ ++++ |.+.+ ++ ++.+ +.||+|+|..-...++..+|+
T Consensus 206 ~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~~-g~--~i~a-D~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 206 QMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVITD-KR--TLDA-DLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEES-SC--EEEC-SEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEeC-CC--EEEc-CEEEECCCCCcCHHHHHhCCc
Confidence 345555667899999999999998754 5555 55543 33 6788 679999998766567766676
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.45 E-value=0.00048 Score=80.90 Aligned_cols=63 Identities=14% Similarity=0.265 Sum_probs=47.4
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEE--cCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILI--DPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~--~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
++....++.|+++++++.|++|.. ++ +++.+|++.++. ++.+ +.||+|+|..-...++..+|+
T Consensus 196 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~---~i~~-D~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 196 FYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGT---RLPA-DLVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSC---EEEC-SEEEECCCEEECCHHHHHTTC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCC---EEEc-CEEEECCCCCcCcchhhccCC
Confidence 444555677999999999999986 43 577788775432 5778 779999998755567877776
No 200
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.40 E-value=7.7e-05 Score=85.64 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=34.1
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
|..++|+||||+|++|+++|++|++ .|++|+||||..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~-~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILAR-KGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHh-CCCEEEEEeccC
Confidence 4567999999999999999999999 599999999985
No 201
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.37 E-value=9.1e-05 Score=86.11 Aligned_cols=40 Identities=35% Similarity=0.543 Sum_probs=35.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
|.+++||||||||++|+++|++|++++|++|+|||+.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 5568999999999999999999998558999999998754
No 202
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.35 E-value=0.00054 Score=82.49 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=31.4
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
..+|+||||+|++|+++|..|++ .|++|+|+|+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-~G~~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-KGIRTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-CCCeEEEEECC
Confidence 47899999999999999999999 59999999864
No 203
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.35 E-value=0.00012 Score=84.28 Aligned_cols=39 Identities=33% Similarity=0.662 Sum_probs=35.3
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
....+||+|||+|++|+++|++|+++ |++|+|||+.+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHI 64 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCC
Confidence 44679999999999999999999998 9999999998653
No 204
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.27 E-value=0.00021 Score=86.32 Aligned_cols=63 Identities=19% Similarity=0.220 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCCCCcccCCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 17 QVFRRIVDRIIKDNLLTPSDAVPDLKSFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..|++.+++++...-.... .......+..++||||||+|++|+++|.+|++. |++|+|||+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 76 (523)
T 1mo9_A 14 NQWATRIDEILEAPDGGEV-IYNVDENDPREYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWP 76 (523)
T ss_dssp HHHHHHHHHHHHCTTCCCE-EEECCTTCCSCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred cchhhhhHHHhhccccchh-hhccCCCCCCcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3567778888777432211 111122455679999999999999999999998 99999999986
No 205
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.27 E-value=0.00062 Score=81.39 Aligned_cols=34 Identities=29% Similarity=0.367 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+||||||+|++|+++|++|++. ++|+|||+++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~ 140 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERG 140 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCC
Confidence 458999999999999999999987 8999999986
No 206
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.26 E-value=0.00013 Score=85.26 Aligned_cols=36 Identities=33% Similarity=0.508 Sum_probs=32.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCE-EEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWT-VLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~-VlVLE~G~ 81 (1183)
..++||||||+|++|+++|..|++. |.+ |+|||+.+
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~ 38 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSS 38 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 3468999999999999999999998 999 99999986
No 207
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.26 E-value=0.00016 Score=84.05 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=33.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..++||||||+|++|+++|..|++. |.+|+|||+.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3579999999999999999999998 99999999986
No 208
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.25 E-value=0.00013 Score=85.14 Aligned_cols=36 Identities=33% Similarity=0.382 Sum_probs=32.6
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
...+|+||||+|++|+++|..|++ .|++|+||||.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-SGIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 567999999999999999999999 699999999986
No 209
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.25 E-value=0.00012 Score=83.48 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCC------CEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSN------WTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G------~~VlVLE~G~ 81 (1183)
||||||+|++|+++|++|+++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 999999999999999999998 6 9999999985
No 210
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.23 E-value=0.00016 Score=87.49 Aligned_cols=38 Identities=32% Similarity=0.504 Sum_probs=34.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
...+||||||||++|+++|++|+++ |++|+|||+.+..
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRV 39 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 4568999999999999999999998 9999999998754
No 211
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.23 E-value=0.00016 Score=85.11 Aligned_cols=35 Identities=46% Similarity=0.621 Sum_probs=32.4
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
||+||||+|++|+++|++|++ .|++|+||||.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~-~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN-AGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-cCCeEEEEecCCCc
Confidence 799999999999999999999 69999999997654
No 212
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.23 E-value=0.00015 Score=86.60 Aligned_cols=35 Identities=31% Similarity=0.386 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|++|++. |++|+|||++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCCC
Confidence 479999999999999999999998 99999999953
No 213
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.22 E-value=0.00014 Score=84.53 Aligned_cols=39 Identities=31% Similarity=0.471 Sum_probs=35.2
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCC-CCeEEEEcCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENP-NWTVLLLEAGREES 694 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~-G~~VlvLE~G~~~~ 694 (1183)
..++|++|||+|++|+++|++|++ . |++|+|||+.+..+
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~-~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVAT-QLDKRVLVLERRPHIG 44 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHH-HSCCCEEEECSSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCCCCC
Confidence 457999999999999999999999 6 89999999997654
No 214
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.21 E-value=0.00031 Score=82.45 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=34.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CEEEEEcCcCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN-WTVLLLEAGPEE 83 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G-~~VlVLE~G~~~ 83 (1183)
.++||||||||++|+++|++|+++ | ++|+|+|+.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCC
Confidence 568999999999999999999998 9 899999998754
No 215
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00016 Score=86.74 Aligned_cols=37 Identities=35% Similarity=0.526 Sum_probs=31.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+..+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 58 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRS 58 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 34569999999999999999999998 99999999875
No 216
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.20 E-value=0.00016 Score=81.17 Aligned_cols=38 Identities=21% Similarity=0.465 Sum_probs=33.6
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|+.++||||||+|++|+++|+.|++. |++|+|||+..
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 49 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKAV 49 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 366689999999999999999999998 99999999953
No 217
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.20 E-value=0.00021 Score=84.05 Aligned_cols=40 Identities=30% Similarity=0.510 Sum_probs=36.5
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
+|..++||||||+|++|+++|..|+++ |++|+|+|+....
T Consensus 2 ~~~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 2 HMDEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYY 41 (433)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCc
Confidence 366789999999999999999999998 9999999998754
No 218
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.19 E-value=0.00019 Score=82.33 Aligned_cols=35 Identities=46% Similarity=0.651 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
++||+|||+|++|+++|++|+++ |++|+|+|+++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~ 35 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNH 35 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCC
Confidence 37999999999999999999998 999999999865
No 219
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.18 E-value=0.00093 Score=79.54 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
..||||||+|++|+++|.+|++. +|.+|+|+|+.+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 36999999999999999999974 489999999986
No 220
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.17 E-value=0.00017 Score=86.23 Aligned_cols=42 Identities=31% Similarity=0.374 Sum_probs=32.5
Q ss_pred ccccccc-ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 649 QDTKIFE-KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 649 ~np~~~~-~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+|..|. .+||+||||+|++|+++|.+|++ .|++|+|||++.
T Consensus 17 ~~~~~M~~~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 59 (484)
T 3o0h_A 17 QGPGSMGSFDFDLFVIGSGSGGVRAARLAGA-LGKRVAIAEEYR 59 (484)
T ss_dssp -------CCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCCCCCcCCCCEEEECcCHHHHHHHHHHHh-CcCEEEEEeCCC
Confidence 3444444 47999999999999999999999 699999999953
No 221
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.17 E-value=0.00016 Score=81.85 Aligned_cols=57 Identities=5% Similarity=0.117 Sum_probs=44.2
Q ss_pred ccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHH
Q psy8892 285 IRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLL 346 (1183)
Q Consensus 285 ~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LL 346 (1183)
+.++.|+++++++.|++|..+++ ++++|++.+ +++..++.++. ||+|+|..-++.++
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~~----~~~~v~~~~~~~g~~~~i~~D~-vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDGK----LLNALRIKNTKKNEETDLPVSG-LFYAIGHTPATKIV 276 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESSS----SEEEEEEEETTTTEEEEEECSE-EEECSCEEECCGGG
T ss_pred HHhcCCeEEeecceeEEEEcccC----cEEEEEEEECCCCceEEEEeCE-EEEEeCCCCChhHh
Confidence 33456999999999999988766 788998876 45566789985 99999976555444
No 222
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.17 E-value=0.0013 Score=78.62 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=28.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++-|||||||+|++|+++|+.|.+. |...+++|++.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~-~~~~~~~~~~~ 72 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDA-LDPRLNKSASN 72 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHH-HCTTTCTTC--
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhc-CCCceEEeccc
Confidence 3459999999999999999999886 66666666554
No 223
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.17 E-value=0.0047 Score=73.85 Aligned_cols=58 Identities=12% Similarity=0.190 Sum_probs=41.6
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCC-----eEEEEEEee--CCeEEEEEeccEEEEccCc
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITK-----RTYGVEFSK--NRKSYTVKCRKEVILSAGT 913 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~g-----ra~GV~~~~--~~~~~~i~A~k~VILAaGa 913 (1183)
..||..++++-+..|.++++|++|..++.++ ..--|++.+ .++..++.| +.||+|+|.
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~a-r~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRT-RKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEE-EEEEECCCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEe-CEEEECcCC
Confidence 4588777888778899999999998764321 123344443 356778899 679999994
No 224
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.17 E-value=0.001 Score=78.56 Aligned_cols=34 Identities=12% Similarity=0.257 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
.||||||+|++|+++|.+|++. +|.+|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999984 479999999986
No 225
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.17 E-value=0.00016 Score=86.31 Aligned_cols=35 Identities=31% Similarity=0.537 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++|||||||+|++|+++|.+|++. |++|+|||+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 479999999999999999999998 99999999985
No 226
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.16 E-value=0.00027 Score=84.69 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=35.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI 84 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~ 84 (1183)
+...+||+|||||++|+++|+.|+++ |++|+|||+.+...
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~G 47 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPG 47 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCC
Confidence 44578999999999999999999998 99999999987643
No 227
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.15 E-value=0.00023 Score=85.55 Aligned_cols=34 Identities=32% Similarity=0.644 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+||+||||+|++|.++|.++|+. |+||+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 59999999999999999999998 99999999875
No 228
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.14 E-value=0.00018 Score=85.52 Aligned_cols=36 Identities=31% Similarity=0.561 Sum_probs=33.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~ 37 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKG 37 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred CccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 4469999999999999999999998 99999999764
No 229
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.13 E-value=0.0016 Score=76.45 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=32.0
Q ss_pred ceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGREE 693 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~~~ 693 (1183)
.|+||||+|++|+++|..|++. .|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 5999999999999999999982 38999999998753
No 230
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.12 E-value=0.00027 Score=81.57 Aligned_cols=34 Identities=32% Similarity=0.420 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+||||||+|++|+++|..|++. |.+|+|||+.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 68999999999999999999998 99999999986
No 231
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.12 E-value=0.00028 Score=84.20 Aligned_cols=38 Identities=29% Similarity=0.407 Sum_probs=33.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
...+||||||||++|+++|+.|+++ |++|+|||+....
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARL 51 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCC
Confidence 3568999999999999999999998 9999999998754
No 232
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.11 E-value=0.00035 Score=84.04 Aligned_cols=40 Identities=23% Similarity=0.299 Sum_probs=34.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI 84 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~~ 84 (1183)
|.+.+||||||+|++|+++|++|+++ |++|+|||+.+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCC
Confidence 55679999999999999999999998 99999999987643
No 233
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.10 E-value=0.00027 Score=80.97 Aligned_cols=59 Identities=15% Similarity=0.136 Sum_probs=43.0
Q ss_pred CCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 864 RHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 864 ~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
+.|+++++++.|++|..++ +++.+|.+.. +++..++.+ +.||+|+|.-....+|..+|+
T Consensus 214 ~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEA-DRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEEC-SEEEECCCBCCSCGGGGGSSC
T ss_pred cCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeC-CEEEECCCCCCCHHHHHhhcc
Confidence 4589999999999998765 6788888862 455567888 779999996544445544443
No 234
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.10 E-value=0.0013 Score=80.53 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
...||||||+|++|+++|.+|++. +|.+|+|+|+.+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 357999999999999999999984 479999999986
No 235
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.10 E-value=0.00034 Score=79.70 Aligned_cols=37 Identities=30% Similarity=0.451 Sum_probs=34.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc-CC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG-PE 82 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G-~~ 82 (1183)
...+||+|||+|++|+++|++|+++ |++|+|+|+. ..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccc
Confidence 3568999999999999999999998 9999999998 54
No 236
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.09 E-value=0.00029 Score=80.94 Aligned_cols=39 Identities=33% Similarity=0.648 Sum_probs=35.1
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
...+|++|||+|++|+++|.+|++ .|++|+|||+.+..+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS-SGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHH-CCCceEEEeccCCCC
Confidence 457999999999999999999999 599999999987553
No 237
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.08 E-value=0.00026 Score=85.54 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=34.6
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
...+|+||||+|++|+++|++|++ .|++|+|||+.+..+
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHD-SGLNVVVLEARDRVG 40 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSSSB
T ss_pred CCCceEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCCC
Confidence 356899999999999999999999 699999999987654
No 238
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.00026 Score=84.08 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
.+|||||||+|++|+++|++|++. |++|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 369999999999999999999998 9999999995
No 239
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.08 E-value=0.00036 Score=83.70 Aligned_cols=36 Identities=36% Similarity=0.521 Sum_probs=33.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
++||||||+|++|+++|++|+++ |++|+|||+.+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 49999999999999999999998 9999999998754
No 240
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.05 E-value=0.00034 Score=83.44 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC--EEEEEcCcCCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW--TVLLLEAGPEE 83 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~--~VlVLE~G~~~ 83 (1183)
+||||||||++|+++|++|+++ |. +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCC
Confidence 6999999999999999999998 99 99999998754
No 241
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.05 E-value=0.00027 Score=85.20 Aligned_cols=38 Identities=29% Similarity=0.386 Sum_probs=34.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CEEEEEcCcCCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN-WTVLLLEAGPEEI 84 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G-~~VlVLE~G~~~~ 84 (1183)
..+||||||||++|+++|++|+++ | ++|+|||+.....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCC
Confidence 358999999999999999999998 9 9999999987543
No 242
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.04 E-value=0.0028 Score=73.77 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=48.0
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..+....++.|+++++++.|++|..+ +++.+|++.++. ++.+ +.||+|+|..-...++..+|+
T Consensus 189 ~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~---~i~a-D~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 189 AWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGR---SFVA-DSALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSC---EEEC-SEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCC---EEEc-CEEEEeeCCeecHHHHHhCCC
Confidence 34555566789999999999999754 356677775443 6788 779999998877778888876
No 243
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.04 E-value=0.00027 Score=82.59 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=32.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCe-EEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWT-VLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~-VlvLE~G~~ 692 (1183)
+.++|+||||+|++|+++|..|++ .|.+ |+||||.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~-~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQ-AGIGKVTLLESSSE 39 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCCC
Confidence 456899999999999999999999 6999 999999863
No 244
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.04 E-value=0.00033 Score=80.33 Aligned_cols=37 Identities=38% Similarity=0.590 Sum_probs=33.5
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
++|++|||+|++|+++|.+|++ .|++|+|+|+++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKK-LNKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGG-GTCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-CCCcEEEEecCCCCC
Confidence 3799999999999999999999 599999999987543
No 245
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.03 E-value=0.00025 Score=84.86 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|||+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 59999999999999999999998 99999999975
No 246
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.03 E-value=0.00035 Score=84.15 Aligned_cols=37 Identities=30% Similarity=0.533 Sum_probs=34.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+..+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 44579999999999999999999998 99999999975
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.01 E-value=0.00026 Score=84.46 Aligned_cols=37 Identities=32% Similarity=0.542 Sum_probs=33.6
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+..+|||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 33579999999999999999999998 99999999874
No 248
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.00 E-value=0.00035 Score=82.94 Aligned_cols=37 Identities=32% Similarity=0.592 Sum_probs=33.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
|.++|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 34579999999999999999999998 99999999974
No 249
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.00 E-value=0.00032 Score=78.77 Aligned_cols=61 Identities=26% Similarity=0.389 Sum_probs=46.4
Q ss_pred hcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 862 RKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 862 ~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.++.|+++++++.|++|..++ +++.+|.+.. +++..++.+ +.||+|+|...+..+|..+|+
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIET-DGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECC-SEEEECCCEEECCGGGTTSCC
T ss_pred HhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEec-CEEEEeeCCccChHHHhhccc
Confidence 346799999999999998764 5688998874 566667888 789999987655555554444
No 250
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.00 E-value=0.00032 Score=78.98 Aligned_cols=36 Identities=31% Similarity=0.572 Sum_probs=33.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
...+||+|||+|++|+++|..|++. |++|+|||+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 41 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKGM 41 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCCC
Confidence 3569999999999999999999998 99999999983
No 251
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.99 E-value=0.00034 Score=79.06 Aligned_cols=59 Identities=15% Similarity=0.179 Sum_probs=42.5
Q ss_pred cCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 863 KRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 863 ~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
++.|+++++++.|.+|.-+ +++.+|++.. +++..++.+ +.||+|+|.-....+|..+|+
T Consensus 202 ~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEV-DAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEEEECGGGGGSCC
T ss_pred ccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEec-CEEEEeecCCCCchHhhhcce
Confidence 4568999999999999763 4677888763 455567888 679999996654445544444
No 252
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.99 E-value=0.00039 Score=70.77 Aligned_cols=33 Identities=39% Similarity=0.612 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
||++|||+|++|+.+|..|++. |.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 7999999999999999999998 99999999986
No 253
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.99 E-value=0.00038 Score=83.16 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=33.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+|||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3579999999999999999999998 99999999764
No 254
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.98 E-value=0.00034 Score=82.72 Aligned_cols=36 Identities=36% Similarity=0.601 Sum_probs=32.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 4579999999999999999999998 99999999984
No 255
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.98 E-value=0.00043 Score=82.29 Aligned_cols=37 Identities=27% Similarity=0.383 Sum_probs=34.0
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
|..++||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 34679999999999999999999998 99999999984
No 256
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.98 E-value=0.0004 Score=80.74 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=33.7
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+.++|+||||+|++|+++|..|++ .|++|+||||.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-TTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 357899999999999999999999 6999999999863
No 257
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.98 E-value=0.00034 Score=82.16 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+||||||+|++|+++|+.|+++ |++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999999 99999999985
No 258
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.97 E-value=0.00046 Score=81.10 Aligned_cols=40 Identities=23% Similarity=0.420 Sum_probs=36.1
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
|+.++|+||||+|.+|+++|.+|++ .|++|+|||+.+..+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYG 42 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEecCCCcc
Confidence 4567999999999999999999999 699999999987654
No 259
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.97 E-value=0.0004 Score=84.17 Aligned_cols=35 Identities=23% Similarity=0.443 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~ 81 (1183)
..+||||||+|++|+++|+.|++ . |.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCC
Confidence 35899999999999999999999 8 99999999965
No 260
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.96 E-value=0.00039 Score=82.63 Aligned_cols=38 Identities=37% Similarity=0.556 Sum_probs=33.8
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
..+||+||||+|++|+++|.+|++ .|++|+|+||.+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~-~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAK-AKYNVLMADPKGEL 39 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECTTSSS
T ss_pred CccceEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCC
Confidence 447999999999999999999999 69999999976543
No 261
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.96 E-value=0.00041 Score=76.76 Aligned_cols=34 Identities=29% Similarity=0.552 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+||+|||+|++|+++|..|++. |++|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 38999999999999999999998 99999999975
No 262
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.94 E-value=0.0014 Score=80.43 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=31.8
Q ss_pred cceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~ 691 (1183)
..|+||||+|++|+++|.+|++. .|.+|+|+|+.+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 57999999999999999999982 389999999996
No 263
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.94 E-value=0.0004 Score=83.73 Aligned_cols=39 Identities=31% Similarity=0.352 Sum_probs=34.9
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCC-CeEEEEcCCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPN-WTVLLLEAGREESL 695 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G-~~VlvLE~G~~~~~ 695 (1183)
..+|+||||+|++|+++|++|++ .| .+|+|||+....++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~-~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ-NGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH-TTCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 69 99999999876543
No 264
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.94 E-value=0.00063 Score=79.73 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=34.3
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCC-CeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPN-WTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G-~~VlvLE~G~~~~ 694 (1183)
..+|++|||+|++|+++|++|++ .| ++|+|+||.+..+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-AGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEECCCCCC
Confidence 46899999999999999999999 59 8999999987654
No 265
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.93 E-value=0.00039 Score=82.35 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=34.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
.++||||||+|++|+++|++|+++ |++|+|||+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 358999999999999999999998 9999999998754
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.93 E-value=0.00043 Score=77.57 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=49.6
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEe--CCeEEEEEeCcEEEEcCCCCCChHHHHHhCCC
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK--NKQRHTVRARKEVILSAGALNSPQLLMLSGIG 352 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~--~g~~~~i~A~k~VILAAGai~sp~LLl~SGig 352 (1183)
++..+.++.|+++++++.|++|..+ + ++.+|++.+ +++..++.++. ||+|+|..-+..+|..+|+.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~-~----~~~~v~~~~~~~g~~~~~~~D~-vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD-K----VVKQVVVENLKTGEIKELNVNG-VFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES-S----SEEEEEEEETTTCCEEEEECSE-EEECCCEECCHHHHHHTTCC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc-C----ceeEEEEEECCCCceEEEEcCE-EEEEECCCCChhHHhhcCee
Confidence 3344455669999999999999765 3 677888876 35556788985 99999977666787777764
No 267
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.93 E-value=0.00044 Score=81.86 Aligned_cols=38 Identities=26% Similarity=0.417 Sum_probs=34.5
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
.++|+||||+|++|+++|++|++ .|++|+|||+....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK-AGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCC
Confidence 46899999999999999999999 599999999987653
No 268
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.00039 Score=82.90 Aligned_cols=36 Identities=39% Similarity=0.683 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+|||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 3579999999999999999999998 99999999974
No 269
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.92 E-value=0.00042 Score=82.93 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 469999999999999999999998 99999999864
No 270
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.90 E-value=0.00055 Score=83.11 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=33.7
Q ss_pred CC-CCCccEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcC
Q psy8892 43 SF-AEEYDFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGP 81 (1183)
Q Consensus 43 ~~-~~~~DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~ 81 (1183)
.| ...+||||||+|++|+++|+.|++ . |.+|+|||+.+
T Consensus 20 ~M~~~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 61 (550)
T 2e4g_A 20 HMSGKIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPD 61 (550)
T ss_dssp -CCSCCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCC
T ss_pred ccCCCCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCC
Confidence 35 357899999999999999999999 7 99999999975
No 271
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.90 E-value=0.00058 Score=81.77 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=35.4
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL 695 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~ 695 (1183)
...+|++|||+|++|+++|+.|++ .|++|+|||+.+..++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK-AGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeccCCCCC
Confidence 346899999999999999999999 6999999999976543
No 272
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.88 E-value=0.00051 Score=82.55 Aligned_cols=34 Identities=35% Similarity=0.655 Sum_probs=31.8
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+||+||||+|+||.++|.++++ .|+||+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~-~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA-HGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 5999999999999999999999 699999999764
No 273
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.88 E-value=0.00048 Score=82.51 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=32.5
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.+..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQ-LGMKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 46999999999999999999999 69999999987543
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.88 E-value=0.00058 Score=76.55 Aligned_cols=34 Identities=35% Similarity=0.347 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
+||||||+|.+|+.+|+.||+. |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 6999999999999999999998 999999999873
No 275
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.87 E-value=0.00037 Score=83.17 Aligned_cols=35 Identities=37% Similarity=0.585 Sum_probs=33.0
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 47999999999999999999999 599999999986
No 276
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.87 E-value=0.0004 Score=82.90 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=34.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
|+.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~ 39 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYK 39 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 55579999999999999999999998 99999999965
No 277
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.87 E-value=0.00062 Score=81.87 Aligned_cols=40 Identities=28% Similarity=0.328 Sum_probs=34.3
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
|...+|++|||+|++|+++|++|++ .|++|+|||+.+..+
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHT-TSCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEeCCCCC
Confidence 3456899999999999999999999 699999999997654
No 278
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.86 E-value=0.00046 Score=78.07 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=33.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
+...+||+|||+|++|+++|..|++. |++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 45679999999999999999999998 9999999975
No 279
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.86 E-value=0.00049 Score=82.85 Aligned_cols=36 Identities=33% Similarity=0.558 Sum_probs=32.9
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+||+||||+|+||+++|.+|++ .|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~-~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQ-YGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeccC
Confidence 357999999999999999999999 699999999954
No 280
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.86 E-value=0.0005 Score=77.70 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=33.2
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+..+|+||||+|++|+++|..|++ .|++|+|+|+.+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 38 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGM-RGLSFRFVDPLP 38 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 356899999999999999999999 699999999985
No 281
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.86 E-value=0.00067 Score=81.36 Aligned_cols=37 Identities=38% Similarity=0.521 Sum_probs=33.9
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
++|+||||+|++|+++|++|++ .|++|+|||+.+..+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTV-AGFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCCEEEEeCCCCCC
Confidence 4899999999999999999999 699999999987654
No 282
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.86 E-value=0.00063 Score=81.11 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=32.9
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCC--eEEEEcCCCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNW--TVLLLEAGREES 694 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~--~VlvLE~G~~~~ 694 (1183)
.|+||||+|++|+++|++|++ .|. +|+|||+.+..+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-APCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-SSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHh-CCCCCcEEEEeCCCCCC
Confidence 699999999999999999999 599 999999987554
No 283
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.84 E-value=0.00037 Score=83.19 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 38 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 4569999999999999999999998 99999999964
No 284
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.84 E-value=0.00066 Score=77.32 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC-CCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-REE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G-~~~ 693 (1183)
..+|++|||+|++|+++|++|++ .|++|+|||+. ...
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~-~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR-AGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-TSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCcEEEEecccccc
Confidence 46799999999999999999999 69999999998 544
No 285
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.83 E-value=0.0006 Score=81.32 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=33.5
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
..+|+||||+|++|+++|+.|++ .|++|+|||+.+..+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~-~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARLG 52 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHT-TTCCEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCCC
Confidence 46899999999999999999999 699999999987654
No 286
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.83 E-value=0.00041 Score=79.10 Aligned_cols=33 Identities=24% Similarity=0.222 Sum_probs=30.7
Q ss_pred eEEeeCCCchHHHHHHHHhcCCC------CeEEEEcCCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPN------WTVLLLEAGRE 692 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G------~~VlvLE~G~~ 692 (1183)
|+||||+|++|+++|+.|++ .| ++|+|||++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~-~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHE-RYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHH-hccccCCCceEEEEECCCC
Confidence 89999999999999999999 46 99999999863
No 287
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.82 E-value=0.00061 Score=81.21 Aligned_cols=35 Identities=29% Similarity=0.399 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC--CEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSN--WTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G--~~VlVLE~G~~ 82 (1183)
.+||||||+|++|+++|++|+++ | ++|+|||+.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCC
Confidence 58999999999999999999998 8 99999999764
No 288
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.81 E-value=0.00057 Score=81.11 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=32.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~-~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAA-LGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 36999999999999999999999 599999999953
No 289
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.79 E-value=0.00061 Score=80.53 Aligned_cols=36 Identities=42% Similarity=0.607 Sum_probs=32.9
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+||+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCeEEEEcCCC
Confidence 457999999999999999999999 699999999984
No 290
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.78 E-value=0.00063 Score=81.34 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|+||+++|.+|++ .|++|+|+|++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 36999999999999999999999 699999999975
No 291
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.78 E-value=0.00048 Score=82.99 Aligned_cols=34 Identities=29% Similarity=0.499 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~ 81 (1183)
.+||||||+|++|+++|+.|++ . |.+|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCC
Confidence 3799999999999999999999 8 99999999975
No 292
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.77 E-value=0.00068 Score=80.61 Aligned_cols=34 Identities=26% Similarity=0.479 Sum_probs=32.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 58999999999999999999998 99999999985
No 293
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.77 E-value=0.00068 Score=75.66 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
|||+|||+|++|+++|..|++. |. +|+|||+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~~ 35 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKGM 35 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCCC
Confidence 7999999999999999999998 99 999999963
No 294
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.77 E-value=0.0007 Score=79.84 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=33.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCC
Confidence 468999999999999999999998 999999999864
No 295
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.77 E-value=0.00087 Score=77.28 Aligned_cols=36 Identities=22% Similarity=0.478 Sum_probs=33.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
++||+|||+|++|+++|++|+++ |++|+|+|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCc
Confidence 47999999999999999999998 9999999998753
No 296
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.76 E-value=0.00051 Score=77.01 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
..+||+|||+|++|+++|..|++. |++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC
Confidence 358999999999999999999998 9999999975
No 297
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.76 E-value=0.00063 Score=80.67 Aligned_cols=36 Identities=33% Similarity=0.577 Sum_probs=33.2
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..+||+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAA-FGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHh-CCCcEEEEcCCC
Confidence 357999999999999999999999 699999999984
No 298
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.75 E-value=0.00065 Score=76.42 Aligned_cols=57 Identities=12% Similarity=0.161 Sum_probs=42.6
Q ss_pred hhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 860 PIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 860 ~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
.+.++.|+++++++.|++|..+ +++.+|++.. +++..++.+ +.||+|+|.-.+..+|
T Consensus 196 ~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 196 RAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELAT-DGVFIFIGHVPNTAFV 254 (325)
T ss_dssp HHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGG
T ss_pred HHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEc-CEEEEccCCCCChHHH
Confidence 3445579999999999999864 4688898874 566667888 6799999865444444
No 299
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.75 E-value=0.0008 Score=75.04 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
+|||||||+|++|+++|..|++. |++|+|||+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC
Confidence 48999999999999999999998 9999999863
No 300
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.73 E-value=0.0007 Score=80.83 Aligned_cols=61 Identities=7% Similarity=0.035 Sum_probs=42.9
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeC--CeEEEEEeccEEEEccCccCcHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKN--RKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~--~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
.+....++.|+++++++.|.+|..+++ ++ ..|++.++ ++..++.+ +.||+|+|---...+|
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~~~~~~~~~~~-D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 232 LVAASMEERGIPFLRKTVPLSVEKQDD-GK-LLVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHHHHTTCCEEETEEEEEEEECTT-SC-EEEEEEETTTCCEEEEEE-SEEEECSCEEECCGGG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCC-Cc-EEEEEecCCCCceeEEEc-CEEEECcccccCcCcC
Confidence 444556678999999999999987653 33 34666553 45567888 6799999976444443
No 301
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.71 E-value=0.00077 Score=79.80 Aligned_cols=34 Identities=35% Similarity=0.565 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCC
Confidence 48999999999999999999998 99999999985
No 302
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.71 E-value=0.00077 Score=74.49 Aligned_cols=35 Identities=31% Similarity=0.555 Sum_probs=32.1
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.+|++|||+|++|+++|..|++ .|++|+|+|++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR-ARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCc
Confidence 4899999999999999999999 5999999999753
No 303
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.70 E-value=0.00059 Score=81.63 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=33.0
Q ss_pred CCCCccEEEECCChhHHHHHHHHhc-CCCCEEEEEcCc
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTE-NSNWTVLLLEAG 80 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~-~~G~~VlVLE~G 80 (1183)
|..+|||||||+|++|+++|.+|++ . |++|+|||+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecc
Confidence 5567999999999999999999999 8 9999999953
No 304
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.70 E-value=0.00082 Score=80.54 Aligned_cols=34 Identities=44% Similarity=0.689 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 48999999999999999999998 99999999984
No 305
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.70 E-value=0.00079 Score=80.03 Aligned_cols=36 Identities=31% Similarity=0.390 Sum_probs=33.3
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
..++|+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVE-QGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 457999999999999999999999 699999999984
No 306
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.69 E-value=0.00086 Score=68.14 Aligned_cols=33 Identities=39% Similarity=0.663 Sum_probs=31.4
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
||++|||+|++|+.+|..|++ .|.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 799999999999999999999 699999999985
No 307
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.69 E-value=0.00071 Score=80.68 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=33.6
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+.+||+||||+|++|+++|.+|++ .|++|+|+|+.+.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~~ 39 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCC
Confidence 457999999999999999999999 5999999999653
No 308
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.69 E-value=0.00072 Score=80.67 Aligned_cols=38 Identities=29% Similarity=0.506 Sum_probs=34.1
Q ss_pred ccccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
|+.+||+||||+|++|+++|.+|++ .|++|+|+|+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 3457999999999999999999999 6999999999654
No 309
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.69 E-value=0.00079 Score=81.31 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhc------------CCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTE------------NSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~------------~~G~~VlVLE~G~ 81 (1183)
..+||||||+|++|+++|..|++ . |.+|+|||+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-KLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-CCeEEEEeCCC
Confidence 46899999999999999999999 7 99999999865
No 310
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.68 E-value=0.00074 Score=80.45 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 469999999999999999999998 99999999985
No 311
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.68 E-value=0.00078 Score=80.18 Aligned_cols=36 Identities=25% Similarity=0.501 Sum_probs=33.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+++|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 3569999999999999999999998 99999999985
No 312
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.67 E-value=0.00098 Score=79.96 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=33.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
..+||||||+|++|+++|+.|++. |.+|+|||+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCC
Confidence 457999999999999999999998 9999999998653
No 313
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.67 E-value=0.00095 Score=79.56 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CEEEEEcCcCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN-WTVLLLEAGPEE 83 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G-~~VlVLE~G~~~ 83 (1183)
..+||+|||+|++|+++|++|+++ | .+|+|+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 468999999999999999999998 7 899999998754
No 314
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.67 E-value=0.0009 Score=77.20 Aligned_cols=34 Identities=29% Similarity=0.654 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcCC
Q psy8892 49 DFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGPE 82 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~~ 82 (1183)
||||||+|++|+++|..|+++ +|.+|+|||+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999984 5899999999863
No 315
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.00082 Score=80.12 Aligned_cols=35 Identities=46% Similarity=0.693 Sum_probs=32.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-YGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 46999999999999999999999 699999999985
No 316
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.66 E-value=0.00068 Score=75.67 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEE-EcCc
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLL-LEAG 80 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlV-LE~G 80 (1183)
+.+||+|||+|++|+++|..|++. |++|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC
Confidence 458999999999999999999998 999999 9994
No 317
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.66 E-value=0.00081 Score=80.37 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=41.7
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQL 919 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~l 919 (1183)
.+....++.|+++++++.|.+|...++ +. ..|++.+ +++..++.+ +.||+|+|---...+
T Consensus 230 ~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~-~~v~~~~~~~g~~~~~~~-D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 230 LVTEHMESHGTQFLKGCVPSHIKKLPT-NQ-LQVTWEDHASGKEDTGTF-DTVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECTT-SC-EEEEEEETTTTEEEEEEE-SEEEECSCEEESCGG
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEcCC-Cc-EEEEEEeCCCCeeEEEEC-CEEEEcccCCcccCc
Confidence 444556678999999999999987542 32 3455554 355567888 679999997644444
No 318
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.66 E-value=0.0011 Score=77.28 Aligned_cols=32 Identities=25% Similarity=0.495 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|+|||+|++|+++|..|+++ |.+|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 699999999999999999999 99999999976
No 319
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.65 E-value=0.00088 Score=79.83 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=32.9
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCC--CeEEEEcCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPN--WTVLLLEAGREE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G--~~VlvLE~G~~~ 693 (1183)
.+|+||||+|++|+++|++|++ .| ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~-~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER-AFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH-HCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHH-hCCCCCEEEEECCCCC
Confidence 5799999999999999999999 58 999999997654
No 320
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.64 E-value=0.0023 Score=77.98 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=30.3
Q ss_pred eEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~ 691 (1183)
|+||||+|++|+++|.+|++. .|.+|+|+|+.+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 899999999999999999983 388999999996
No 321
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.64 E-value=0.00077 Score=79.12 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=31.6
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+|++|||+|++|+++|..|++ .|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~-~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ-HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 4799999999999999999999 699999999985
No 322
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.64 E-value=0.00084 Score=75.24 Aligned_cols=60 Identities=8% Similarity=0.158 Sum_probs=44.9
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeC---CeEEEEEeccEEEEccCccCcHHHH
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKN---RKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~---~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
+....++.|+++++++.|++|..++ +++.+|++... ++..++.+ +.||+|+|.-..+.+|
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDV-AGLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEEC-SEEEECSCEEESCGGG
T ss_pred HHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEc-CEEEEEeCCCCChHHh
Confidence 3344567899999999999998765 57889988752 44467888 6799999976554444
No 323
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.63 E-value=0.00083 Score=80.10 Aligned_cols=36 Identities=36% Similarity=0.595 Sum_probs=33.2
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+.+||+||||+|++|+++|.+|++ .|++|+|+|+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~-~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAE-LGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecCC
Confidence 457999999999999999999999 599999999875
No 324
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.63 E-value=0.0011 Score=78.95 Aligned_cols=37 Identities=38% Similarity=0.468 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcCCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGPEE 83 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~~~ 83 (1183)
..+||+|||+|++|+++|++|++. |. +|+|+|+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCC
Confidence 468999999999999999999998 98 89999998753
No 325
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.62 E-value=0.00085 Score=79.45 Aligned_cols=34 Identities=38% Similarity=0.560 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 58999999999999999999998 99999999973
No 326
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.62 E-value=0.0012 Score=76.08 Aligned_cols=37 Identities=24% Similarity=0.477 Sum_probs=33.6
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
++|++|||+|++|+++|.+|++ .|++|+|+|+.+..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCcEEEEEecCCcC
Confidence 4799999999999999999999 599999999987653
No 327
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.61 E-value=0.00091 Score=79.93 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHhc-CCCCEEEEEcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTE-NSNWTVLLLEA 79 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~-~~G~~VlVLE~ 79 (1183)
.+|||||||+|++|+++|++|++ . |++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEec
Confidence 46999999999999999999999 8 999999994
No 328
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.60 E-value=0.00096 Score=79.19 Aligned_cols=34 Identities=32% Similarity=0.564 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 58999999999999999999998 99999999973
No 329
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.60 E-value=0.001 Score=80.64 Aligned_cols=56 Identities=9% Similarity=0.120 Sum_probs=40.2
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccC
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLN 915 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~ 915 (1183)
...+|...+++.|++++.+ +|++|..+++ +.+++|.+.+ ++ +++| +-||.|+|...
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~-g~--~i~a-d~vV~A~G~~s 222 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKE-GR--TLEA-DLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETT-SC--EECC-SEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECC-Cc--EEEe-CEEEECCCCch
Confidence 3345555555679999999 8999988653 5677777654 32 6888 77999999653
No 330
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.57 E-value=0.00084 Score=75.88 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=32.4
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
+..+|+||||+|++|+++|..|++ .|++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR-AQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH-TTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecC
Confidence 457999999999999999999999 59999999975
No 331
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.55 E-value=0.0011 Score=82.17 Aligned_cols=34 Identities=26% Similarity=0.504 Sum_probs=32.5
Q ss_pred CccEEEECCChhHHHHHHHHhc-----CCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTE-----NSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~-----~~G~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|..|++ . |.+|+||||.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 6899999999999999999999 8 99999999975
No 332
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.55 E-value=0.0015 Score=81.45 Aligned_cols=38 Identities=32% Similarity=0.483 Sum_probs=34.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
....+||||||+|++|+++|+.|++. |++|+|+|+++.
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~ 425 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRD 425 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 44679999999999999999999998 999999999864
No 333
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.54 E-value=0.001 Score=78.83 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccCC
Confidence 458999999999999999999998 99999999953
No 334
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.54 E-value=0.001 Score=75.01 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=41.3
Q ss_pred cCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 863 KRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 863 ~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
++.|+++++++.|.+|..++++.++.+|++.. +++..++.+ +.||+|+|.-.+..+|
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKV-SGLFFAIGHEPATKFL 264 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGG
T ss_pred hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEec-CEEEEEeCCccchHHh
Confidence 35689999999999998654211788888875 455567888 6799999976555444
No 335
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.54 E-value=0.0012 Score=73.92 Aligned_cols=34 Identities=32% Similarity=0.272 Sum_probs=31.9
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+|+||||+|.+|+.+|..|++ .|++|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-LGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 599999999999999999999 6999999999874
No 336
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.51 E-value=0.0012 Score=79.55 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=49.1
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHH-HHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQ-LLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~-lL~~SGI 925 (1183)
..+....++.|+++++++.|++|..+++ +++.++.+...++..++.| +.||+|+|..-+.. +|..+|+
T Consensus 259 ~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~a-D~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 259 AYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIET-DFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEEC-SCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEc-CEEEECcCCccCCccCHHHcCC
Confidence 3455556678999999999999987543 5676665554333346888 67999999876665 6777776
No 337
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.51 E-value=0.0016 Score=78.71 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=35.9
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 43 ~~~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
.|..+|||||||+|..|+++|..|++. |++||+|||.+.
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~ 42 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSY 42 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCc
Confidence 456689999999999999999999998 999999999974
No 338
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.50 E-value=0.0013 Score=78.24 Aligned_cols=39 Identities=31% Similarity=0.279 Sum_probs=34.5
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCC-CeEEEEcCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPN-WTVLLLEAGREES 694 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G-~~VlvLE~G~~~~ 694 (1183)
...+|++|||+|++|+++|++|++ .| .+|+|+|+.+..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~-~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTE-LGYKNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHH-TTCCSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHH-cCCCCEEEEeCCCCCC
Confidence 346899999999999999999999 57 7999999997654
No 339
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.48 E-value=0.0017 Score=74.91 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=31.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCC--CEEEEEcCcC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSN--WTVLLLEAGP 81 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G--~~VlVLE~G~ 81 (1183)
...+||||||+|++|+++|.+|++. | .+|+|+|+..
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC
Confidence 4568999999999999999999998 7 5699999874
No 340
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.48 E-value=0.0013 Score=78.16 Aligned_cols=66 Identities=20% Similarity=0.166 Sum_probs=43.7
Q ss_pred hhhhhhh-cCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCcHHH--HHHcCC
Q psy8892 856 AFIRPIR-KRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNSPQL--LMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~-~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~tp~l--L~~SGI 925 (1183)
..+.... ++.|+++++++.|++|..++ +. +.|.+.. +++..++.+ +.||+|+|.--+..+ |..+|+
T Consensus 219 ~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 219 NALVGALAKNEKMKFMTSTKVVGGTNNG--DS-VSLEVEGKNGKRETVTC-EALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHHHHHTCCEEECSCEEEEEEECS--SS-EEEEEECC---EEEEEE-SEEEECSCEEECCTTSCHHHHTC
T ss_pred HHHHHHHhhcCCcEEEeCCEEEEEEEcC--Ce-EEEEEEcCCCceEEEEC-CEEEECCCcccCCCCCCchhcCC
Confidence 3455556 67899999999999998765 32 3344442 343457888 679999997755555 455555
No 341
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.47 E-value=0.0013 Score=73.23 Aligned_cols=60 Identities=8% Similarity=0.071 Sum_probs=44.9
Q ss_pred hhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee--CCeEEEEEeccEEEEccCccCcHHHHHHc
Q psy8892 861 IRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK--NRKSYTVKCRKEVILSAGTLNSPQLLMLS 923 (1183)
Q Consensus 861 ~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~--~~~~~~i~A~k~VILAaGa~~tp~lL~~S 923 (1183)
+.++.|+++++++.|.+|..++ +++.+|++.. +++..++.+ +.||+|+|.--...+|..+
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVV-PGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEEC-SEEEECSCEEECCGGGBCT
T ss_pred HhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEec-CEEEEEecCccChhhhhcc
Confidence 3445799999999999998764 5777888874 566667888 6799999976544554433
No 342
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.45 E-value=0.0013 Score=77.94 Aligned_cols=34 Identities=35% Similarity=0.598 Sum_probs=32.0
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+||+||||+|++|+++|.+|++ .|++|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-LGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 5899999999999999999999 599999999983
No 343
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.44 E-value=0.0014 Score=77.63 Aligned_cols=35 Identities=40% Similarity=0.600 Sum_probs=32.4
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
+||+||||+|++|+++|.+|++ .|++|+|+|+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ-LGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 4899999999999999999999 5999999999854
No 344
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.44 E-value=0.0014 Score=77.79 Aligned_cols=34 Identities=44% Similarity=0.703 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 69999999999999999999998 99999999985
No 345
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.44 E-value=0.0085 Score=70.15 Aligned_cols=62 Identities=18% Similarity=0.290 Sum_probs=42.9
Q ss_pred HhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 855 KAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 855 ~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..++....++.|+++++++.|++|. + ++ +.+.. ++...++.+ +-||+++|.-. +.++..+|.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~--~~---~~~~~~~g~~~~i~~-d~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--P--DK---VIYEDLNGNTHEVPA-KFTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--S--SE---EEEECTTSCEEEEEC-SEEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--C--Cc---eEEEeeCCCceEeec-ceEEEeccCCC-chHHHhccc
Confidence 3355566677899999999999983 3 22 33442 455668888 77888888554 567777764
No 346
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.43 E-value=0.0013 Score=75.82 Aligned_cols=33 Identities=36% Similarity=0.711 Sum_probs=31.0
Q ss_pred eEEeeCCCchHHHHHHHHhcCC--CCeEEEEcCCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENP--NWTVLLLEAGRE 692 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~--G~~VlvLE~G~~ 692 (1183)
|+||||+|++|+++|..|++ . |++|+||||.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~-~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ-ARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCCCCEEEEECCCC
Confidence 89999999999999999999 5 999999999864
No 347
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.41 E-value=0.0014 Score=78.45 Aligned_cols=34 Identities=50% Similarity=0.723 Sum_probs=32.1
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+||+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 5899999999999999999999 699999999985
No 348
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.40 E-value=0.0013 Score=74.29 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=31.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEA 689 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~ 689 (1183)
..+|+||||+|++|+++|..|++ .|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEec
Confidence 46899999999999999999999 5999999998
No 349
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.39 E-value=0.0022 Score=75.12 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=45.0
Q ss_pred hhcccCCCCeEEEcCceEEEEEe--eCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCC
Q psy8892 282 LRPIRKRPNLKVAKRARVTKVLI--DENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIG 352 (1183)
Q Consensus 282 l~~~~~~~g~~i~~~~~V~~I~~--~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig 352 (1183)
+....++.|+++++++.|++|.. +++ ++.+|++.+ + .++.++. ||+|+|..-...+|..+|+.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~----~v~~v~~~~-G--~~i~~D~-Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQ----KVTAVLCED-G--TRLPADL-VIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTC----CEEEEEETT-S--CEEECSE-EEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCC----cEEEEEeCC-C--CEEEcCE-EEECCCCCcCcchhhccCCC
Confidence 33344566999999999999986 444 677776643 3 2578885 99999976555677777764
No 350
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.38 E-value=0.0015 Score=78.88 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=39.4
Q ss_pred HHhhhhhhhcC-CCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCcc
Q psy8892 854 SKAFIRPIRKR-HNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTL 914 (1183)
Q Consensus 854 ~~~~L~~~~~~-~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~ 914 (1183)
...+|...+++ .|++++.+ .|++|..+++ +.+++|+..+++ +++| +-||.|+|..
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~---~i~a-d~vV~AdG~~ 232 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNG---EISG-QLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSC---EEEC-SEEEECSGGG
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCC---EEEc-CEEEECCCcc
Confidence 34455555555 89999999 5999988653 567777765433 4889 6799999864
No 351
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.36 E-value=0.0018 Score=78.65 Aligned_cols=55 Identities=13% Similarity=0.207 Sum_probs=40.0
Q ss_pred HHhhhhhhhcCC-CcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCcc
Q psy8892 854 SKAFIRPIRKRH-NLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTL 914 (1183)
Q Consensus 854 ~~~~L~~~~~~~-g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~ 914 (1183)
...+|...+++. |++++.+ +|++|..+++ +++++|++.++ + ++.| +.||+|+|..
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G-~--~i~a-d~vI~A~G~~ 251 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATG-R--VFDA-DLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTS-C--EEEC-SEEEECCGGG
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCC-C--EEEC-CEEEECCCCc
Confidence 334555555555 9999999 9999988653 67778876543 2 6889 6799999964
No 352
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.36 E-value=0.0016 Score=77.54 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=33.1
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ-LGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 36899999999999999999999 5999999999864
No 353
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.36 E-value=0.0018 Score=79.48 Aligned_cols=35 Identities=29% Similarity=0.490 Sum_probs=32.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
...|||||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3569999999999999999999998 9999999985
No 354
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.33 E-value=0.0012 Score=79.49 Aligned_cols=55 Identities=9% Similarity=0.085 Sum_probs=40.4
Q ss_pred HHhhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCcc
Q psy8892 854 SKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTL 914 (1183)
Q Consensus 854 ~~~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~ 914 (1183)
...+|...+++.|++++.+ +|++|..+++ +++++|++.++ + +++| +-||.|+|..
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g-~--~~~a-d~vV~A~G~~ 229 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQH-G--EISG-DLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSS-C--EEEC-SEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCC-C--EEEc-CEEEECCCcc
Confidence 3344555555689999999 9999988653 67788877543 2 6889 7799999865
No 355
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.33 E-value=0.0016 Score=77.01 Aligned_cols=35 Identities=37% Similarity=0.544 Sum_probs=32.3
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|+..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 36 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKGN 36 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCC
Confidence 36899999999999999999999 599999999983
No 356
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.32 E-value=0.0014 Score=78.49 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=32.1
Q ss_pred cceEEeeCCCchHHHHHHHHhcCC---CCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENP---NWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~---G~~VlvLE~G~ 691 (1183)
+||+||||+|++|+++|.+|++ . |++|+|+|+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT-SHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCcCEEEEEeCCC
Confidence 4899999999999999999999 5 99999999986
No 357
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.31 E-value=0.0014 Score=73.21 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=46.1
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee-CCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSK-NRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~-~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
++..+.++.|+++++++.|.+|..++ +++.+|++.. +++..++.+ +.||+|+|.--...++
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNV-PGIFTFVGLNVRNEIL 249 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECC-SCEEECSCEEECCGGG
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeec-CeEEEEEcCCCCchhh
Confidence 34444568899999999999998765 6888998873 455567888 6799999976544443
No 358
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.30 E-value=0.0019 Score=77.40 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=34.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
..+|+||||+|++|+++|..|++ .|.+|+|||+.+..+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~-~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG-AGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-HTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCCC
Confidence 36899999999999999999999 599999999987553
No 359
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.29 E-value=0.0016 Score=77.49 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=33.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~-~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCc
Confidence 46899999999999999999999 59999999998643
No 360
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.29 E-value=0.0022 Score=74.45 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.8
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
.|+|||+|++|+++|..|++ .|++|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~-~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK-HGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCCEEEEecCCC
Confidence 68999999999999999999 6999999999863
No 361
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.28 E-value=0.0022 Score=77.16 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
...|||+|||+|++|+++|.+|++. |.+|+|+|+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~ 244 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER 244 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 4579999999999999999999998 9999999963
No 362
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.25 E-value=0.0016 Score=77.86 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=31.5
Q ss_pred ccccceEEeeCCCchHHHHHHHHhc-CCCCeEEEEcC
Q psy8892 654 FEKEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLEA 689 (1183)
Q Consensus 654 ~~~~~D~VVIGsG~aG~~~A~~Lae-~~G~~VlvLE~ 689 (1183)
|..+||+||||+|++|+++|.+|++ . |++|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEec
Confidence 3457999999999999999999998 6 899999993
No 363
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.25 E-value=0.0019 Score=77.35 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHhcC-C-CCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTEN-S-NWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~-~-G~~VlVLE~G~ 81 (1183)
+|||||||+|++|+++|++|++. + |++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999984 3 89999999985
No 364
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.24 E-value=0.0023 Score=76.07 Aligned_cols=38 Identities=37% Similarity=0.470 Sum_probs=33.0
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCC-eEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNW-TVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~-~VlvLE~G~~~~ 694 (1183)
..+|++|||+|++|+++|++|++ .|. +|+|+|+++..+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~-~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE-AGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH-TTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-cCCCceEEEeCCCCCC
Confidence 46899999999999999999999 598 899999987653
No 365
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.21 E-value=0.0018 Score=76.54 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.1
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+||+||||+|+||+++|.+|++ .|++|+|+|+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEccCC
Confidence 46899999999999999999999 599999999953
No 366
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.18 E-value=0.0023 Score=75.81 Aligned_cols=34 Identities=47% Similarity=0.710 Sum_probs=32.4
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
++|+||||+|+||+++|.+|++ .|++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-LGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6999999999999999999999 599999999986
No 367
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.14 E-value=0.0077 Score=74.60 Aligned_cols=38 Identities=32% Similarity=0.393 Sum_probs=34.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
...+||+|||+|++|+++|+.|++. |++|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 4568999999999999999999998 9999999998653
No 368
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.13 E-value=0.0022 Score=76.57 Aligned_cols=32 Identities=34% Similarity=0.610 Sum_probs=30.1
Q ss_pred ccceEEeeCCCchHHHHHHHHhc-CCCCeEEEEc
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLE 688 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae-~~G~~VlvLE 688 (1183)
.+||+||||+|++|+++|.+|++ . |++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 36899999999999999999998 6 89999999
No 369
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.11 E-value=0.0031 Score=72.68 Aligned_cols=63 Identities=10% Similarity=0.167 Sum_probs=45.3
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..+....++.|+++++++.|++|..++ + ...|++.+ ++ ++.+ +.||+|+|..-...+|..+|+
T Consensus 191 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~-~~~v~~~~-g~--~i~~-d~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 191 KAVQAGLEGLGVRFHLGPVLASLKKAG--E-GLEAHLSD-GE--VIPC-DLVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHHHTTTCEEEESCCEEEEEEET--T-EEEEEETT-SC--EEEE-SEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEecC--C-EEEEEECC-CC--EEEC-CEEEECcCCCcCHHHHHHCCC
Confidence 345555667899999999999998765 3 23454433 32 5788 679999998766667777776
No 370
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.10 E-value=0.0028 Score=79.36 Aligned_cols=38 Identities=32% Similarity=0.402 Sum_probs=34.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
..+|+||||+|++|+++|..|++ .|++|+|||+++..+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN-FGIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeccccee
Confidence 36899999999999999999999 699999999987543
No 371
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.06 E-value=0.0038 Score=71.42 Aligned_cols=32 Identities=28% Similarity=0.623 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-||||||+|++|+++|.+|++. | +|+|+|+.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~ 40 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEP 40 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCC
Confidence 5999999999999999999998 8 999999986
No 372
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.05 E-value=0.0029 Score=78.37 Aligned_cols=36 Identities=25% Similarity=0.471 Sum_probs=33.0
Q ss_pred ccceEEeeCCCchHHHHHHHHhc-----CCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTE-----NPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae-----~~G~~VlvLE~G~~ 692 (1183)
.++|+||||+|++|+++|..|++ . |++|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCC
Confidence 36899999999999999999998 6 999999999853
No 373
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.98 E-value=0.0035 Score=73.86 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=33.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
..+|++|||||++|+++|..|++ .|++|+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~-~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA-KGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeccCCC
Confidence 35799999999999999999999 59999999998754
No 374
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.96 E-value=0.0054 Score=76.89 Aligned_cols=36 Identities=31% Similarity=0.516 Sum_probs=33.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
..+||+|||+|++|+++|..|++. |++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 468999999999999999999998 999999999864
No 375
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.95 E-value=0.012 Score=74.26 Aligned_cols=38 Identities=32% Similarity=0.393 Sum_probs=34.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCCC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~~ 83 (1183)
...+||+|||+|++|+++|+.|++. |++|+|+|+....
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcC
Confidence 3468999999999999999999998 9999999998753
No 376
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.94 E-value=0.0035 Score=76.95 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
..||+||||+|+||+++|.+|++ .|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~-~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK-YGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHh-CCCeEEEEecc
Confidence 46999999999999999999999 59999999984
No 377
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.93 E-value=0.0037 Score=73.87 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
+||||||+|++|+++|.+|++. +|.+|+|||+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999984 489999999986
No 378
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.92 E-value=0.0038 Score=77.90 Aligned_cols=38 Identities=37% Similarity=0.557 Sum_probs=34.3
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
...+|+||||+|++|+++|..|++ .|++|+|+|+++..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~-~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGV-RGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 356899999999999999999999 59999999998654
No 379
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.89 E-value=0.0035 Score=80.98 Aligned_cols=59 Identities=10% Similarity=0.041 Sum_probs=44.8
Q ss_pred CCCCeEEEcCceEEEEEee-CCCCcceEEEEEEEe------CCeEEEEEeCcEEEEcCCCCCChHHHHHhC
Q psy8892 287 KRPNLKVAKRARVTKVLID-ENDNLKRATGVEFFK------NKQRHTVRARKEVILSAGALNSPQLLMLSG 350 (1183)
Q Consensus 287 ~~~g~~i~~~~~V~~I~~~-~~~~~~rv~GV~~~~------~g~~~~i~A~k~VILAAGai~sp~LLl~SG 350 (1183)
++.|++|++++.|++|.-+ ++ ++.+|++.+ +++..++.++. ||+|+|-.-+..++...|
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~----~v~~v~~~~~~~~~~~G~~~~i~~D~-Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENG----ELSAIVVAELDEARELGGTQRFEADV-LAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTS----CEEEEEEEEECTTCCEEEEEEEECSE-EEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCCC----CEEEEEEEeccccCCCCceEEEEcCE-EEECCCcCcChHHHHhCC
Confidence 4569999999999999865 44 788898876 34456799985 999999765556665543
No 380
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.88 E-value=0.0035 Score=74.85 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC---CEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSN---WTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G---~~VlVLE~G~ 81 (1183)
++||||||+|++|+++|.+|++. | .+|+|||+.+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCC
Confidence 58999999999999999999997 6 9999999986
No 381
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.87 E-value=0.0053 Score=71.96 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhc--CCCCEEEEEcCcCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTE--NSNWTVLLLEAGPE 82 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~--~~G~~VlVLE~G~~ 82 (1183)
.||||||+|++|+++|.+|++ . |.+|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCC
Confidence 599999999999999999999 6 899999999864
No 382
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.85 E-value=0.0059 Score=75.92 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=33.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 45 ~~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
...+||||||+|++|+.+|..|++. |++|+|+|+.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~ 407 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSE 407 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 3468999999999999999999998 999999999864
No 383
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.84 E-value=0.005 Score=72.32 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~~ 82 (1183)
..||||||+|++|+++|..|++ . |.+|+|||+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCC
Confidence 3699999999999999999998 6 899999999873
No 384
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.81 E-value=0.0051 Score=74.41 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=36.4
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESL 695 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~~ 695 (1183)
+.+|||+|||+|..|+++|..|++ .|.+||+|||.+..++
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~-~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSR-SGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHh-CCCEEEEEcCCCcccC
Confidence 457999999999999999999999 5999999999987654
No 385
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.79 E-value=0.0045 Score=71.99 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHhc---CCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTE---NSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~---~~G~~VlVLE~G~ 81 (1183)
||||||+|++|+++|.+|++ . |.+|+|||+.+
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~ 37 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSR 37 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCC
Confidence 79999999999999999998 7 99999999986
No 386
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.76 E-value=0.004 Score=73.52 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=41.7
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHH
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLL 920 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL 920 (1183)
..+....++.|+++++++.|++|..++ +++.+|.. +++ ++.+ +.||+|+|.--+..+|
T Consensus 195 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~--~g~--~i~~-D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 195 DILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTL--DGK--EIKS-DIAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEET--TSC--EEEE-SEEEECCCEEECCGGG
T ss_pred HHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEe--CCC--EEEC-CEEEECcCCCCCHHHH
Confidence 345555667899999999999998644 56766654 332 5788 6799999976555443
No 387
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.74 E-value=0.0058 Score=72.91 Aligned_cols=38 Identities=18% Similarity=0.416 Sum_probs=33.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 44 FAEEYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 44 ~~~~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
+...+||||||+|++|+++|..|.+. +|.+|+|||+.+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 45679999999999999999988763 478999999986
No 388
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.70 E-value=0.006 Score=69.77 Aligned_cols=58 Identities=17% Similarity=0.211 Sum_probs=41.6
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.++....++.|+++++++.|+++. . . +|++. ++ + +.+ +.||+|+|.--+..+|..+|+
T Consensus 187 ~~l~~~l~~~gV~i~~~~~v~~i~--~--~---~v~~~-~g-~--i~~-D~vi~a~G~~p~~~ll~~~gl 244 (367)
T 1xhc_A 187 NMIKDMLEETGVKFFLNSELLEAN--E--E---GVLTN-SG-F--IEG-KVKICAIGIVPNVDLARRSGI 244 (367)
T ss_dssp HHHHHHHHHTTEEEECSCCEEEEC--S--S---EEEET-TE-E--EEC-SCEEEECCEEECCHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEE--e--e---EEEEC-CC-E--EEc-CEEEECcCCCcCHHHHHhCCC
Confidence 345555667899999999999985 2 2 35543 23 3 788 679999998766567777776
No 389
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.69 E-value=0.0095 Score=77.53 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~~ 82 (1183)
..+||+|||||++|+++|.+|++. |+ +|+|+|+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL-GYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCC
Confidence 368999999999999999999998 98 7999999764
No 390
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.69 E-value=0.0056 Score=72.84 Aligned_cols=34 Identities=26% Similarity=0.552 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
+||||||+|++|+++|.+|++. +|.+|+|||+.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 6999999999999999999983 489999999986
No 391
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.66 E-value=0.0054 Score=71.30 Aligned_cols=35 Identities=11% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC--EEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW--TVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~--~VlVLE~G~ 81 (1183)
..+||||||+|++|+++|.+|++. |. +|+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCC
Confidence 468999999999999999999997 76 599999986
No 392
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.66 E-value=0.0045 Score=73.86 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=43.2
Q ss_pred hhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 861 IRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 861 ~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.+++.|+++++++.|++|.-+ +++.+|...+ + .++.+ +.||+|+|..-+..++..+|+
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~---~~v~~v~~~~-g--~~i~a-D~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGN---EKVERVIDMN-N--HEYKV-DALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECS---SSCCEEEETT-C--CEEEC-SEEEECCCEEECCHHHHHTTC
T ss_pred HHHhCCcEEEeCCeeEEEecC---CceEEEEeCC-C--eEEEe-CEEEECCCcCcCchHHHhcCC
Confidence 345679999999999999754 3455666433 3 26888 679999998877778887776
No 393
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.64 E-value=0.0079 Score=70.88 Aligned_cols=36 Identities=25% Similarity=0.487 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~~ 82 (1183)
.+||||||+|++|+++|++|++. +|.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 47999999999999999999984 4789999999863
No 394
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.53 E-value=0.0066 Score=71.51 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~ 81 (1183)
.||||||+|++|+++|.+|++. +|.+|+|||+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 3899999999999999999984 489999999986
No 395
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.49 E-value=0.0063 Score=71.76 Aligned_cols=37 Identities=30% Similarity=0.531 Sum_probs=32.7
Q ss_pred cceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGREE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~~~ 693 (1183)
.+|+||||+|++|+++|..|++. .|.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999983 37899999999753
No 396
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.48 E-value=0.0071 Score=78.12 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=46.7
Q ss_pred hcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee------CCeEEEEEeccEEEEccCccCcHHHHHHcC
Q psy8892 862 RKRHNLKVAKEARVTKILIDPITKRTYGVEFSK------NRKSYTVKCRKEVILSAGTLNSPQLLMLSG 924 (1183)
Q Consensus 862 ~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~------~~~~~~i~A~k~VILAaGa~~tp~lL~~SG 924 (1183)
.++.|++|++++.|.+|.-+++ +++.+|++.+ +++..++.+ +.||+|+|---+..++...|
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~-D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEA-DVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEEC-SEEEEECCEEECCHHHHHTT
T ss_pred HHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEc-CEEEECCCcCcChHHHHhCC
Confidence 4567999999999999986412 5788998875 244567888 67999999776667776655
No 397
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.47 E-value=0.0061 Score=71.93 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=32.2
Q ss_pred ceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGREE 693 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~~~ 693 (1183)
.|+||||+|++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999982 38999999999754
No 398
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.47 E-value=0.0083 Score=74.34 Aligned_cols=38 Identities=34% Similarity=0.405 Sum_probs=34.3
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
..+|++|||+|++|+++|..|++ .|++|+|+|+.+..+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHH-CCCeEEEEecCCCCC
Confidence 46899999999999999999999 699999999987553
No 399
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.43 E-value=0.0065 Score=72.50 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=45.8
Q ss_pred hhhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 856 AFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 856 ~~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
..+....++.|+++++++.|++|..++ +++ .|++.+ ++ ++.+ +.||+|+|..-+..++..+|+
T Consensus 230 ~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~d-G~--~i~a-D~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 230 NWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKD-GR--KVET-DHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETT-SC--EEEE-SEEEECCCEEECCTTHHHHTC
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECC-CC--EEEC-CEEEECCCCCccHHHHHHcCC
Confidence 345555678899999999999997654 443 555543 32 6788 679999998766667777776
No 400
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.38 E-value=0.0099 Score=73.88 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=33.7
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
..+|+||||+|+||+.+|..|++ .|++|+|+|+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAA-RGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 36899999999999999999999 69999999998654
No 401
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.34 E-value=0.0061 Score=72.72 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=32.2
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCC---CeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPN---WTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G---~~VlvLE~G~~ 692 (1183)
++|+||||+|++|+++|.+|++ .| .+|+|+|+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~-~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLT-NYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHh-cCCCCCeEEEEECCCC
Confidence 5899999999999999999999 46 99999999874
No 402
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.31 E-value=0.0091 Score=74.82 Aligned_cols=37 Identities=30% Similarity=0.481 Sum_probs=33.6
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
..+|+||||+|+||+.+|..|++ .|++|+|+|+.+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-SGYTVHLTDTAEKI 424 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCc
Confidence 35799999999999999999999 59999999998754
No 403
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.30 E-value=0.0093 Score=70.31 Aligned_cols=36 Identities=28% Similarity=0.292 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC--CEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSN--WTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G--~~VlVLE~G~~ 82 (1183)
..+||||||+|++|+.+|..|++. | .+|+|+|+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCc
Confidence 357999999999999999999997 6 99999999863
No 404
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.25 E-value=0.0076 Score=70.99 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.7
Q ss_pred ceEEeeCCCchHHHHHHHHhcC-CCCeEEEEcCCCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGREE 693 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~-~G~~VlvLE~G~~~ 693 (1183)
.|+||||+|++|+++|.+|++. .|.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999982 38999999998743
No 405
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.25 E-value=0.011 Score=74.46 Aligned_cols=38 Identities=34% Similarity=0.405 Sum_probs=34.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREES 694 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~~ 694 (1183)
...|++|||+|++|+++|+.|++ .|++|+|+|+....+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~-~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEecCcCC
Confidence 35799999999999999999999 699999999987654
No 406
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.21 E-value=0.0084 Score=71.30 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=42.7
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGV 925 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGI 925 (1183)
.+....++.|+++++++.|++|..+ +++.+|.. +++ ++.+ +.||+|+|..-...+|..+|+
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~--~~~--~i~~-D~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGN---ERVEAVET--DKG--TYKA-DLVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEE--TTE--EEEC-SEEEECSCEEESCGGGTTSCC
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE--CCC--EEEc-CEEEECcCCCcChHHHHhCCc
Confidence 4445556789999999999999754 35656654 232 6888 679999998755555555554
No 407
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.17 E-value=0.01 Score=69.57 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=32.0
Q ss_pred cceEEeeCCCchHHHHHHHHhc--CCCCeEEEEcCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTE--NPNWTVLLLEAGRE 692 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae--~~G~~VlvLE~G~~ 692 (1183)
..|+||||+|++|+++|..|++ ..|++|+|+|+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 3699999999999999999998 14899999999974
No 408
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.09 E-value=0.0093 Score=69.31 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.8
Q ss_pred eEEeeCCCchHHHHHHHHhc---CCCCeEEEEcCCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTE---NPNWTVLLLEAGRE 692 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae---~~G~~VlvLE~G~~ 692 (1183)
|+||||+|++|+.+|..|++ . |.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCC
Confidence 79999999999999999998 5 899999999974
No 409
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.96 E-value=0.01 Score=68.86 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=43.7
Q ss_pred hhhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCC
Q psy8892 857 FIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVG 926 (1183)
Q Consensus 857 ~L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG 926 (1183)
.+....++.|+++++++.|++|. + + +|++.+ ++ ++.+ +.||+|+|.--+..+|..+|+-
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~-g~--~i~~-D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDD-GT--RIAA-DMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETT-SC--EEEC-SEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECC-CC--EEEc-CEEEECcCCCccHHHHHhCCCC
Confidence 44455667899999999999997 3 3 455543 32 5788 6799999987666788888773
No 410
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=94.87 E-value=0.01 Score=72.79 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC--------CEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSN--------WTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G--------~~VlVLE~G~ 81 (1183)
..+|+|||+|++|+++|++|++. | .+|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccC
Confidence 47999999999999999999997 7 9999999986
No 411
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.79 E-value=0.016 Score=67.42 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=46.2
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCC
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIG 352 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig 352 (1183)
.+....++.|++|++++.|++|..++ ++.+|++.++. ++.++. ||+|+|..-...+|..+|+.
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~~-----~~~~v~~~dg~---~i~aD~-Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGEG-----QLEQVMASDGR---SFVADS-ALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECSS-----SCCEEEETTSC---EEECSE-EEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeccC-----cEEEEEECCCC---EEEcCE-EEEeeCCeecHHHHHhCCCc
Confidence 34444556799999999999997643 45567664433 688985 99999987776788777764
No 412
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.59 E-value=0.014 Score=68.70 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhc-C-C----CCEEEEEcCcCC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTE-N-S----NWTVLLLEAGPE 82 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~-~-~----G~~VlVLE~G~~ 82 (1183)
.+||+|||+|++|+.+|..|++ . + |.+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 5799999999999999999987 4 2 799999999863
No 413
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.57 E-value=0.018 Score=74.84 Aligned_cols=61 Identities=18% Similarity=0.271 Sum_probs=44.5
Q ss_pred hcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEee------------CCeEEEEEeccEEEEccCcc-CcHHHHHH-cCC
Q psy8892 862 RKRHNLKVAKEARVTKILIDPITKRTYGVEFSK------------NRKSYTVKCRKEVILSAGTL-NSPQLLML-SGV 925 (1183)
Q Consensus 862 ~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~------------~~~~~~i~A~k~VILAaGa~-~tp~lL~~-SGI 925 (1183)
+++.|+++++++.+.+|..++ +++++|++.+ .+++.++.| +.||+|+|.- .+..|+.. +|+
T Consensus 380 ~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~a-D~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 380 AKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKA-DVVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEEC-SEEEECSCEECCCHHHHHHTTTS
T ss_pred HHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEEC-CEEEECCCCCCCchhhhhcccCc
Confidence 345799999999999998754 7888887752 123457888 7799999974 45566554 465
No 414
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.49 E-value=0.019 Score=67.70 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=32.7
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCC--CeEEEEcCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPN--WTVLLLEAGREE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G--~~VlvLE~G~~~ 693 (1183)
.+|+||||+|++|+.+|..|++ .| ++|+|+|+.+..
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLK-HHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHh-cCCCCCEEEEeCCCcC
Confidence 5799999999999999999999 47 999999998754
No 415
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.45 E-value=0.02 Score=69.58 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGPE 82 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~~ 82 (1183)
.||+|||+|++|+++|++|++. +|.+|+|+|+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 3899999999999999999984 4789999999975
No 416
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.33 E-value=0.017 Score=67.87 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=32.5
Q ss_pred cceEEeeCCCchHHHHHHHHhc-C-C----CCeEEEEcCCCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTE-N-P----NWTVLLLEAGREE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae-~-~----G~~VlvLE~G~~~ 693 (1183)
.+|+||||+|++|+.+|..|++ . + |++|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5799999999999999999987 3 1 7999999998654
No 417
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.18 E-value=0.032 Score=64.53 Aligned_cols=64 Identities=11% Similarity=0.011 Sum_probs=43.8
Q ss_pred hhhcccCCCCeEEEcCceEEEEEeeCCCCcceEEEEEEEeCCeEEEEEeCcEEEEcCCCCCChHHHHHhCCCCh
Q psy8892 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSPQLLMLSGIGPR 354 (1183)
Q Consensus 281 ~l~~~~~~~g~~i~~~~~V~~I~~~~~~~~~rv~GV~~~~~g~~~~i~A~k~VILAAGai~sp~LLl~SGig~~ 354 (1183)
.+....++.|+++++++.|+.+..+.+. ..|+. .+++ ++.++. ||++.|-- .+.++..||+.+.
T Consensus 207 ~~~~~l~~~gi~v~~~~~v~~v~~~~~~-----~~v~~-~~g~--~i~~D~-vi~~~g~~-~~~~~~~~gl~~~ 270 (401)
T 3vrd_B 207 LYGFGTENALIEWHPGPDAAVVKTDTEA-----MTVET-SFGE--TFKAAV-INLIPPQR-AGKIAQSASLTND 270 (401)
T ss_dssp HSCTTSTTCSEEEECTTTTCEEEEETTT-----TEEEE-TTSC--EEECSE-EEECCCEE-ECHHHHHTTCCCT
T ss_pred HHHHHHHhcCcEEEeCceEEEEEecccc-----eEEEc-CCCc--EEEeeE-EEEecCcC-CchhHhhcccccc
Confidence 3444556789999999999999877652 12333 2332 588985 88888743 4578888888543
No 418
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=94.06 E-value=0.018 Score=70.67 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=32.4
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCC--------CeEEEEcCCC-CC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPN--------WTVLLLEAGR-EE 693 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G--------~~VlvLE~G~-~~ 693 (1183)
..+++|||+|++|+++|++|++ .| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~-~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR-LAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCcccccCCCceEEEEeccCccc
Confidence 4689999999999999999998 57 9999999987 44
No 419
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.94 E-value=0.025 Score=66.24 Aligned_cols=32 Identities=22% Similarity=0.501 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCC--CEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSN--WTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G--~~VlVLE~G~ 81 (1183)
-|||||+|++|+++|.+|++. | .+|+|+|+.+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCC
Confidence 389999999999999999986 5 6799999986
No 420
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.80 E-value=0.043 Score=63.00 Aligned_cols=36 Identities=11% Similarity=0.235 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcCC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~~ 82 (1183)
+..-|||||+|++|+++|..|+.. +.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCC
Confidence 467899999999999999999655 899999999863
No 421
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.65 E-value=0.038 Score=63.86 Aligned_cols=62 Identities=11% Similarity=-0.010 Sum_probs=41.9
Q ss_pred hhhhhcCCCcEEEcCcEEEEEEEcCCCCeEEEEEEeeCCeEEEEEeccEEEEccCccCcHHHHHHcCCCC
Q psy8892 858 IRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGP 927 (1183)
Q Consensus 858 L~~~~~~~g~~i~~~t~V~~I~~~~~~gra~GV~~~~~~~~~~i~A~k~VILAaGa~~tp~lL~~SGIG~ 927 (1183)
+....++.|+++++++.|..+..+.+. ..|+..+ ++ ++.+ +.||+++|- ..+.++..||+-+
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~---~~v~~~~-g~--~i~~-D~vi~~~g~-~~~~~~~~~gl~~ 269 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEA---MTVETSF-GE--TFKA-AVINLIPPQ-RAGKIAQSASLTN 269 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTT---TEEEETT-SC--EEEC-SEEEECCCE-EECHHHHHTTCCC
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccc---eEEEcCC-Cc--EEEe-eEEEEecCc-CCchhHhhccccc
Confidence 333456789999999999998876532 2344433 32 5788 668888874 4457888888743
No 422
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.57 E-value=0.048 Score=64.91 Aligned_cols=35 Identities=14% Similarity=0.413 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
++.-|||||+|.+|+.+|.+|++. +++|+|||+.+
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCC
Confidence 456799999999999999999987 89999999875
No 423
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.45 E-value=0.034 Score=65.10 Aligned_cols=32 Identities=25% Similarity=0.588 Sum_probs=28.5
Q ss_pred EEeeCCCchHHHHHHHHhcCCC--CeEEEEcCCCC
Q psy8892 660 FIVIGAGSGGSVIANRLTENPN--WTVLLLEAGRE 692 (1183)
Q Consensus 660 ~VVIGsG~aG~~~A~~Lae~~G--~~VlvLE~G~~ 692 (1183)
+||||+|+||+++|.+|++ .| .+|+|+|+.+.
T Consensus 3 VvIIG~G~AGl~aA~~l~~-~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRR-LDKESDIIIFEKDRD 36 (437)
T ss_dssp EEEECCSTTHHHHHHHHHH-HCSSSCEEEEESSSC
T ss_pred EEEECCCHHHHHHHHHHHh-CCCCCcEEEEeCCCC
Confidence 7999999999999999998 35 67999999864
No 424
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.44 E-value=0.053 Score=62.18 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=32.9
Q ss_pred cccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCCC
Q psy8892 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE 693 (1183)
Q Consensus 655 ~~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~~ 693 (1183)
....-+||||+|+||+.+|..|.. .+.+|+|+|+.+..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~~ 44 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKYL 44 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCCC
Confidence 346789999999999999999966 69999999998753
No 425
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.19 E-value=0.048 Score=64.93 Aligned_cols=36 Identities=11% Similarity=0.345 Sum_probs=32.2
Q ss_pred ccceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCCC
Q psy8892 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692 (1183)
Q Consensus 656 ~~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~~ 692 (1183)
++.-+||||+|.||+.+|.+|++ .+++|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~-~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDT-KKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCT-TTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhh-CCCcEEEECCCCC
Confidence 35679999999999999999998 5999999999864
No 426
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.01 E-value=0.053 Score=63.29 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcC-CCCEEEEEcCcCC
Q psy8892 49 DFIVVGSGSGGSVVANRLTEN-SNWTVLLLEAGPE 82 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~-~G~~VlVLE~G~~ 82 (1183)
.|||||+|++|+++|.+|++. ++.+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 499999999999999999974 3589999999763
No 427
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.81 E-value=0.39 Score=46.83 Aligned_cols=33 Identities=21% Similarity=0.428 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-.|+|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4699999999999999999998 99999999875
No 428
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.59 E-value=0.38 Score=46.05 Aligned_cols=32 Identities=22% Similarity=0.484 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++|||.|..|..+|..|.+. |++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999998 99999999875
No 429
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.28 E-value=0.4 Score=45.81 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-++|+|+|..|..+|..|++. |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 599999999999999999998 99999999864
No 430
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.19 E-value=0.46 Score=45.07 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++|||+|..|..+|..|++. |.+|+++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 699999999999999999998 99999999864
No 431
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=85.11 E-value=0.6 Score=45.39 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
-++|+|+|..|..+|..|.+. |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 589999999999999999998 9999999986
No 432
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.86 E-value=0.77 Score=41.92 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-CEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSN-WTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G-~~VlVLE~G~ 81 (1183)
.++|+|+|..|..+|..|.+. | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 599999999999999999998 8 8999999864
No 433
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.06 E-value=0.73 Score=44.01 Aligned_cols=32 Identities=22% Similarity=0.541 Sum_probs=29.9
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|||.|..|..+|..|.+ .|++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHH-CCCCEEEEECCH
Confidence 58999999999999999999 599999999985
No 434
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.31 E-value=0.83 Score=44.47 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=30.0
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-.++|||+|..|..+|..|.+ .|.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 368999999999999999999 599999999874
No 435
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=82.09 E-value=0.83 Score=43.54 Aligned_cols=32 Identities=28% Similarity=0.530 Sum_probs=29.5
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-++|+|+|..|..+|..|.+ .|++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 58999999999999999999 599999999874
No 436
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.92 E-value=0.93 Score=49.83 Aligned_cols=32 Identities=31% Similarity=0.479 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|...|..+|.+ |++|+++|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999764
No 437
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=81.65 E-value=0.84 Score=43.38 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.++|+|+|..|..+|..|.+. |.+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 499999999999999999998 89999999864
No 438
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=81.64 E-value=0.92 Score=42.88 Aligned_cols=32 Identities=25% Similarity=0.505 Sum_probs=29.2
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|||+|..|..+|..|++ .|.+|+++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 58999999999999999999 599999999864
No 439
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.91 E-value=1.3 Score=48.48 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+++ |++|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999874
No 440
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=80.74 E-value=1.2 Score=49.32 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|.|||+|..|+..|..|+++ |.+|.++.|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 589999999999999999998 99999999874
No 441
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=79.76 E-value=1.1 Score=43.45 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=29.3
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-++|||+|..|..+|..|.+ .|.+|+++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQ-RGQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 58999999999999999999 599999999863
No 442
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.39 E-value=1.3 Score=48.96 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 589999999999999999998 99999999864
No 443
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.77 E-value=1.2 Score=46.05 Aligned_cols=32 Identities=13% Similarity=0.371 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|+|||+|..|..+|..|.+. |.+|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 389999999999999999998 99999999865
No 444
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=77.69 E-value=1.7 Score=47.15 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+++ |++|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 589999999999999999998 99999999875
No 445
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=76.11 E-value=2.2 Score=43.78 Aligned_cols=33 Identities=12% Similarity=0.282 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-.+.|||+|..|..+|..|+++ |.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999999998 99999999875
No 446
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=75.90 E-value=1.7 Score=39.57 Aligned_cols=32 Identities=28% Similarity=0.475 Sum_probs=29.0
Q ss_pred eEEeeCCCchHHHHHHHHhcCCC-CeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPN-WTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G-~~VlvLE~G~ 691 (1183)
-++|+|+|..|..+|..|.+ .| .+|+++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKT-SSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCH
Confidence 58999999999999999999 58 8999999864
No 447
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=75.81 E-value=2.1 Score=46.28 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.|||+|..|..+|..|+++ |.+|.++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 378999999999999999998 99999999875
No 448
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=75.70 E-value=1.8 Score=48.31 Aligned_cols=31 Identities=26% Similarity=0.441 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
-|.|||+|..|+.+|..|+++ |.+|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 589999999999999999998 9999999985
No 449
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=75.19 E-value=1.6 Score=47.85 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=29.5
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-+.|||+|..|...|..++. +|++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 58899999999999999999 699999999764
No 450
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=74.84 E-value=2.2 Score=44.15 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
--|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 4699999999999999999998 9999999864
No 451
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=74.71 E-value=2.4 Score=46.50 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.|||+|..|+..|..|+ + |.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 5899999999999999999 7 99999999875
No 452
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=74.63 E-value=2 Score=45.60 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
..|+|||+|..|+.+|..|++. |. +|+|+++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 4799999999999999999998 86 899999875
No 453
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=73.98 E-value=1.4 Score=48.06 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.+.|||+|..|...|..|+++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 589999999999999999998 89999999874
No 454
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=73.77 E-value=1.7 Score=41.15 Aligned_cols=32 Identities=31% Similarity=0.462 Sum_probs=29.0
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.++|+|+|..|..+|..|.+ .|.+|+++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~-~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHR-MGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 48999999999999999999 599999999864
No 455
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.67 E-value=1.6 Score=43.65 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=29.6
Q ss_pred eEEeeCCCchHHHHHHHHhcCC-CCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENP-NWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~-G~~VlvLE~G~ 691 (1183)
.++|||.|..|..+|..|.+ . |++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 58999999999999999998 7 89999999874
No 456
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=73.20 E-value=1.9 Score=46.21 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
--|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 3599999999999999999998 9999999865
No 457
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=73.05 E-value=2.2 Score=47.08 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=29.6
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+.|||+|..|...|..|++ .|.+|+++.+.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAK-TGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHH-TTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCh
Confidence 58999999999999999999 699999999874
No 458
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=72.88 E-value=2.3 Score=46.74 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=29.4
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+.|||+|..|...|..|++ .|.+|+++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQR-SGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCc
Confidence 48999999999999999999 699999999874
No 459
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=72.59 E-value=2.7 Score=46.30 Aligned_cols=32 Identities=22% Similarity=0.391 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC--EEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNW--TVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~--~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 699999999999999999998 88 999999874
No 460
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=72.57 E-value=2.5 Score=46.63 Aligned_cols=32 Identities=31% Similarity=0.479 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|...|..|+++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999875
No 461
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=72.42 E-value=2.7 Score=46.11 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|.|||+|..|..+|..|+++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 589999999999999999998 99999999864
No 462
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.39 E-value=2.6 Score=49.40 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..-|.|||.|..|+.+|..||++ |.+|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 34799999999999999999998 99999999864
No 463
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=71.74 E-value=2.7 Score=46.33 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCc
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G 80 (1183)
.|.|||+|..|..+|..|+++ |.+|.++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 599999999999999999998 9999999 54
No 464
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=71.46 E-value=2.9 Score=48.39 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+++ |++|+++|+.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcH
Confidence 599999999999999999999 99999999875
No 465
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=71.29 E-value=3.3 Score=44.94 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
--|.|||+|..|..+|..|+ + |++|++.++.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 36899999999999999999 8 99999999875
No 466
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.96 E-value=2 Score=43.01 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|+|||.|..|..+|..|.+..|.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999999999999999863278999999875
No 467
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=70.76 E-value=2.8 Score=45.87 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=29.4
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-+.|||+|..|...|..|++ .|++|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48999999999999999999 699999999874
No 468
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=70.68 E-value=3.2 Score=48.49 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+++ |++|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999998 99999999874
No 469
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=70.28 E-value=2.1 Score=40.94 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-++|||+|..|..+|..|++. |.+|.+.++.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 599999999999999999987 88999999864
No 470
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.25 E-value=2.5 Score=49.35 Aligned_cols=32 Identities=22% Similarity=0.475 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-+||+|+|-.|..+|..|++. |++|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 499999999999999999998 99999999875
No 471
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=70.15 E-value=3.4 Score=45.49 Aligned_cols=33 Identities=27% Similarity=0.438 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
--|.|||+|..|..+|..|+++ |. +|.++++.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 4699999999999999999998 88 999999875
No 472
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=68.90 E-value=2.4 Score=43.83 Aligned_cols=31 Identities=19% Similarity=0.446 Sum_probs=28.9
Q ss_pred EEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 660 FIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 660 ~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
++|||+|..|..+|..|.+ .|++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLS-RKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 7999999999999999999 599999999874
No 473
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=68.70 E-value=3.9 Score=45.11 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
..-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 45799999999999999999998 85 899999875
No 474
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.53 E-value=3.9 Score=44.51 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.-.|.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 45799999999999999999998 99999999876
No 475
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=68.33 E-value=3.1 Score=44.96 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=29.4
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
-+.|||+|..|...|..|++ .|++|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 48999999999999999999 699999999874
No 476
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=68.06 E-value=3.7 Score=47.66 Aligned_cols=32 Identities=31% Similarity=0.324 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|.|||+|..|+.+|..|+++ |++|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 589999999999999999998 99999999875
No 477
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=67.80 E-value=4 Score=45.69 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-.|.|||+|..|...|..|++. |.+|.++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999998 99999999864
No 478
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=67.63 E-value=4.1 Score=45.20 Aligned_cols=34 Identities=41% Similarity=0.552 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+.-+.|||+|..|..+|..|+++ |.+|.++.|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 45799999999999999999998 99999999864
No 479
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=67.34 E-value=4.2 Score=43.63 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-++|+|+|..|..+|..|++. |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 89999998864
No 480
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=67.33 E-value=3.1 Score=46.21 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=28.8
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
-+.|||+|..|...|..|++ .|.+|+++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~-~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLAL-AGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHH-TTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCEEEEEECh
Confidence 58999999999999999999 69999999985
No 481
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=67.16 E-value=4.3 Score=44.18 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=30.8
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.-.+.|||.|..|...|..|++ .|++|++.++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-WPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-STTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 4569999999999999999999 699999999875
No 482
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=67.15 E-value=4.6 Score=45.25 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-.|.|||+|..|.++|..|+++ |.+|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 483
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=67.12 E-value=4.4 Score=46.49 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
..+.|||.|-.|+.+|..||+. |++|+.+|..+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 5799999999999999999998 99999999764
No 484
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.95 E-value=3.8 Score=47.42 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-+.|||+|..|+.+|..|++. |.+|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 378999999999999999998 99999999864
No 485
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=66.92 E-value=3.3 Score=45.90 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=27.9
Q ss_pred EEEECCChhHHHHHHHHhcCCCCEEEEEcC
Q psy8892 50 FIVVGSGSGGSVVANRLTENSNWTVLLLEA 79 (1183)
Q Consensus 50 vIVVGsG~aG~~~A~~LA~~~G~~VlVLE~ 79 (1183)
+.|||+|..|..+|..|+++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 78999999999999999998 999999998
No 486
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=66.87 E-value=3.7 Score=42.44 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=29.6
Q ss_pred cceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 657 ~~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
.--++|||+|..|...|..|.+ .|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG-GCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCC
Confidence 3468999999999999999999 69999999864
No 487
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=66.81 E-value=4.5 Score=41.37 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=28.7
Q ss_pred EEEEC-CChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 50 FIVVG-SGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 50 vIVVG-sG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
+.||| +|..|..+|..|++. |.+|.+++|.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999 999999999999998 99999999864
No 488
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=66.63 E-value=4.6 Score=45.69 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 47 ~~DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.--|+|||+|.+|+.+|..|... |.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999888 99999999876
No 489
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=66.40 E-value=3.6 Score=47.14 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|||||.|-.|..+|..|.+. |.+|+|||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999998 99999999875
No 490
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=66.32 E-value=3.9 Score=44.17 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=28.9
Q ss_pred EEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 660 FIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 660 ~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
+.|||+|..|...|..|++ .|++|+++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCK-QGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHh-CCCCEEEEEcCc
Confidence 7899999999999999999 699999999875
No 491
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=66.31 E-value=4.4 Score=44.27 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC--EEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNW--TVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~--~VlVLE~G~ 81 (1183)
-|.|||+|..|.++|..|+.. |. .|.++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 378999999999999999998 88 999999864
No 492
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=65.66 E-value=4.6 Score=47.00 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcCC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGPE 82 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~~ 82 (1183)
-.|.|||+|..|+.+|..||+++|+ +|+++++.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3699999999999999999987689 9999998863
No 493
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=65.62 E-value=2.9 Score=44.70 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=29.3
Q ss_pred ceEEeeCCCchHHHHHHHHhcCCCCeEEEEcCC
Q psy8892 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690 (1183)
Q Consensus 658 ~D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G 690 (1183)
--++|||+|-.|...|..|.+ .|++|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~-~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMP-TGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGG-GTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 459999999999999999999 69999999865
No 494
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=65.21 E-value=3.8 Score=46.14 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
.|.|||+|..|..+|..|+++ |++|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999998 99999999864
No 495
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=64.88 E-value=4.6 Score=41.39 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=29.3
Q ss_pred eEEeeCCCchHHHHHHHHhcCCCCeEEEEcCCC
Q psy8892 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691 (1183)
Q Consensus 659 D~VVIGsG~aG~~~A~~Lae~~G~~VlvLE~G~ 691 (1183)
.+.|||.|..|...|..|++ .|.+|+++++.+
T Consensus 21 ~I~iiG~G~mG~~la~~l~~-~g~~V~~~~~~~ 52 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEI-AGHEVTYYGSKD 52 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 58999999999999999999 699999998874
No 496
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=64.84 E-value=4.9 Score=44.46 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
-|.|||+|..|..+|..|+.. |+ +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 699999999999999999998 88 999999865
No 497
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=64.69 E-value=3.8 Score=45.84 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
++.-|||+|+|.+|..+|..|... |. +|.|+|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 346799999999999999999988 87 999999874
No 498
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=64.52 E-value=4.4 Score=43.83 Aligned_cols=35 Identities=31% Similarity=0.473 Sum_probs=30.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 46 EEYDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 46 ~~~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
...-|+|||+|..|+.+|..|+.. |. ++.|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 346899999999999999999998 74 899999775
No 499
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=64.45 E-value=4.9 Score=46.52 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCEEEEEcCcC
Q psy8892 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81 (1183)
Q Consensus 49 DvIVVGsG~aG~~~A~~LA~~~G~~VlVLE~G~ 81 (1183)
-++|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 589999999999999999998 99999999764
No 500
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=64.30 E-value=4.1 Score=45.10 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-EEEEEcCcC
Q psy8892 48 YDFIVVGSGSGGSVVANRLTENSNW-TVLLLEAGP 81 (1183)
Q Consensus 48 ~DvIVVGsG~aG~~~A~~LA~~~G~-~VlVLE~G~ 81 (1183)
.-|.|||+|..|.++|..|+.. |+ +|.++|+.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 4699999999999999999998 87 999999865
Done!