RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy8892
(1183 letters)
>gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated.
Length = 560
Score = 329 bits (845), Expect = e-100
Identities = 178/489 (36%), Positives = 252/489 (51%), Gaps = 68/489 (13%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTD 710
EYD+I+IGAGS G V+ANRL+E+P+ +VLLLEAG + +P +++ +
Sbjct: 3 TMEYDYIIIGAGSAGCVLANRLSEDPDVSVLLLEAGGPDYRWDFFIQMPAALAFPLQGKR 62
Query: 711 FNWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPG 769
+NW Y+TE + M+++ PRGK +GG+S IN MVY RG D+DNW L G G
Sbjct: 63 YNWAYETEPEP----HMNNRRMECPRGKVLGGSSSINGMVYIRGNAMDYDNWAELPGLEG 118
Query: 770 WSYRDVLPYFKKSEDISVSRLKG-SPYHGIGGYLKVEQTSWRT-PLSAAFLEAGSELGYD 827
WSY D LPYFKK+E +R G Y G G L V + T PL AF+EAG + GY
Sbjct: 119 WSYADCLPYFKKAE----TRDGGEDDYRGGDGPLSVTRGKPGTNPLFQAFVEAGVQAGYP 174
Query: 828 QVDHC-----ENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDP 882
+ D E GF + G R SA++A++ P KR NL + A +IL +
Sbjct: 175 RTDDLNGYQQE---GFGPMDRTVTNGRRWSAARAYLDPALKRPNLTIVTHALTDRILFEG 231
Query: 883 ITKRTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL 942
KR GVE+ + T + R+EVILSAG +NSPQLL LSG+GP HL+EL IPV+ DL
Sbjct: 232 --KRAVGVEYERGGGRETARARREVILSAGAINSPQLLQLSGIGPAEHLKELGIPVVHDL 289
Query: 943 K-VGYNMQDHLSMAGLVFLVNSSVTIVES--KYTKPRYLMDFLVNGAGPLTLPGGA---- 995
VG N+QDHL + + + V++ + + KP+ ++L G G GA
Sbjct: 290 PGVGENLQDHLEVY-IQYECKQPVSLYPALKWWNKPKIGAEWLFTGTGL-----GASNHF 343
Query: 996 EALAFYPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAY 1055
EA F ++ + P+++ F P A+ D GS + +
Sbjct: 344 EAGGFIRSR--AGVDWPNIQYHFLPVAIRYD--GSNA-----------------VKGHGF 382
Query: 1056 SIVPVLVRP-RSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVEL 1114
V P RS SRG VKL+S++P P NY+S +D +AI++ E+
Sbjct: 383 Q---AHVGPMRSP-----SRGSVKLKSADPRAHPSILFNYMSTEQDWREFRDAIRLTREI 434
Query: 1115 SETRAMQKY 1123
A+ Y
Sbjct: 435 MAQPALDPY 443
Score = 311 bits (799), Expect = 8e-94
Identities = 177/552 (32%), Positives = 251/552 (45%), Gaps = 136/552 (24%)
Query: 43 SFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSHIVSS 99
EYD+I++G+GS G V+ANRL+E+ + +VLLLEAG + D ++P ++ +
Sbjct: 1 MTTMEYDYIIIGAGSAGCVLANRLSEDPDVSVLLLEAGGPDYRWDFFIQMPAALAFPLQG 60
Query: 100 DF-NWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIP 158
NW Y TE M N+R PRGKV+GG+S N MVY RG DYD WA
Sbjct: 61 KRYNWAYETEPE----PHMNNRRMECPRGKVLGGSSSINGMVYIRGNAMDYDNWAELP-- 114
Query: 159 TGKVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPY 218
G GWS+ + LPYFKK+E T + Y
Sbjct: 115 ------------------------------GLEGWSYADCLPYFKKAE---TRDGGEDDY 141
Query: 219 HGVGGYLKIERPLWRT-PLAKCVLDAGHEMGYDIVDPSEPNAI---GFSYVLANTGNGER 274
G G L + R T PL + ++AG + GY D + N GF + NG R
Sbjct: 142 RGGDGPLSVTRGKPGTNPLFQAFVEAGVQAGYPRTD--DLNGYQQEGFGPMDRTVTNGRR 199
Query: 275 YSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVI 334
+SA+RA+L P KRPNL + A ++L + KRA GVE+ + R T RAR+EVI
Sbjct: 200 WSAARAYLDPALKRPNLTIVTHALTDRILFEG----KRAVGVEYERGGGRETARARREVI 255
Query: 335 LSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIV 394
LSAGA+NSPQLL LSGIGP +HL+E+ IPV+ D
Sbjct: 256 LSAGAINSPQLLQLSGIGPAEHLKELGIPVVHD--------------------------- 288
Query: 395 ELLMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVES--QFQKP 452
L G VG NLQDH+ + + + V++ + + KP
Sbjct: 289 ----LPG-------------------VGENLQDHLEVY-IQYECKQPVSLYPALKWWNKP 324
Query: 453 RYIVDYWFRRQGPYTSPGGA----ETMALISSKFENDKTRPDIELVFGPGALTGDSNGSL 508
+ ++ F G GA E I S+ P+I+ F P A+ D + ++
Sbjct: 325 KIGAEWLFTGTGL-----GASNHFEAGGFIRSR--AGVDWPNIQYHFLPVAIRYDGSNAV 377
Query: 509 RSLLGISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDS 568
+ F QA+ + P+ R SRG VKL+S++P P NY+S
Sbjct: 378 KG-----HGF-----------QAH-VGPM--RSPSRGSVKLKSADPRAHPSILFNYMSTE 418
Query: 569 RDLDVLIEAIKM 580
+D +AI++
Sbjct: 419 QDWREFRDAIRL 430
>gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino
acid transport and metabolism].
Length = 542
Score = 287 bits (735), Expect = 4e-85
Identities = 167/522 (31%), Positives = 243/522 (46%), Gaps = 63/522 (12%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE-ESLLTDVPLFVSYMV-DTDFN 712
+ EYD++++G+GS GSV+A RL++ +VL+LEAG L +P ++++ ++
Sbjct: 5 KMEYDYVIVGSGSAGSVLAARLSD-AGLSVLVLEAGGPDRRPLIQMPAAYAFLMNGPRYD 63
Query: 713 WGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWS 771
WG++TE + + + WPRGK +GG+S IN MVY RG P+DFD W G PGW
Sbjct: 64 WGFRTEPE----PHLRGRELAWPRGKVLGGSSSINGMVYVRGHPEDFDAWAQESGAPGWP 119
Query: 772 YRDVLPYFKKSED-ISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQ-- 828
Y DVLPYFK++ED + V +HG GG L V P++ AF+EAG +LG+
Sbjct: 120 YDDVLPYFKRAEDLLGVGGQDLRTWHGGGGPLPVSPPRSPNPIARAFIEAGEQLGFPTTP 179
Query: 829 ----VDHCENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPIT 884
D GF G R SA++A+++P KR NL + ARV +IL++
Sbjct: 180 DPNGADQE----GFGPYCVTICNGRRWSAARAYLKPALKRPNLTLLTGARVRRILLEG-- 233
Query: 885 KRTYGVEFSKNRKS--YTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDL 942
R GVE T +EV+L+AG +NSP+LL+LSG+GP HL E I V+ L
Sbjct: 234 DRAVGVEVEIGDGGTIETAVAAREVVLAAGAINSPKLLLLSGIGPADHLLEHGIDVVGRL 293
Query: 943 K-VGYNMQDHLSMAGLVFLVNSSVTIVESKYTKPR-YLMDFLVNGAGPLTLPGGAEALAF 1000
VG N+QDHL + + V S ++K +L+ GP E
Sbjct: 294 PGVGQNLQDHLEIYVAFEATEPTNDSVLSLFSKLGIGADRYLLTRDGPGA-TNHFEGGFV 352
Query: 1001 YPTKYAEDPNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPV 1060
E PD + F P L + G F ++
Sbjct: 353 RSGPAGEY---PDGQYHFAPLPL-------AIRAAGAEHGF--------------TLHVG 388
Query: 1061 LVRPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAM 1120
+RP+SRG V LRS +P + P PNYLS D + I++ E+ A+
Sbjct: 389 PMRPKSRGSVT-------LRSPDPDNRPVIDPNYLSAEGDRAIFRAGIRLTREIIGQPAL 441
Query: 1121 QKYASKLLPVKFPGCEPYEFRSDEYWACAARQLTTNLHHQIC 1162
PG +DE + A R L +H +
Sbjct: 442 DARRKAE---LAPGPRV---TTDEDISAAIRFLARTAYHPMG 477
Score = 275 bits (704), Expect = 7e-81
Identities = 164/549 (29%), Positives = 230/549 (41%), Gaps = 131/549 (23%)
Query: 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEI-ILDEIP-LFVSHIVSSDFN 102
EYD+++VGSGS GSV+A RL++ +VL+LEAG + L ++P + + ++
Sbjct: 5 KMEYDYVIVGSGSAGSVLAARLSDAGL-SVLVLEAGGPDRRPLIQMPAAYAFLMNGPRYD 63
Query: 103 WGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKV 162
WG+ TE ++ + WPRGKV+GG+S N MVY RG P D+D WA
Sbjct: 64 WGFRTEPE----PHLRGRELAWPRGKVLGGSSSINGMVYVRGHPEDFDAWAQE------- 112
Query: 163 MGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDM-KTAELKSSPYHGV 221
G GW +++VLPYFK++ED+ +HG
Sbjct: 113 -------------------------SGAPGWPYDDVLPYFKRAEDLLGVGGQDLRTWHGG 147
Query: 222 GGYLKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAI---GFSYVLANTGNGERYSAS 278
GG L + P P+A+ ++AG ++G+ +PN GF NG R+SA+
Sbjct: 148 GGPLPVSPPRSPNPIARAFIEAGEQLGFPTTP--DPNGADQEGFGPYCVTICNGRRWSAA 205
Query: 279 RAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRH--TVRARKEVILS 336
RA+L+P KRPNL + ARV ++L++ RA GVE T A +EV+L+
Sbjct: 206 RAYLKPALKRPNLTLLTGARVRRILLEG----DRAVGVEVEIGDGGTIETAVAAREVVLA 261
Query: 337 AGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIVEL 396
AGA+NSP+LL+LSGIGP DHL E I V+ L
Sbjct: 262 AGAINSPKLLLLSGIGPADHLLEHGIDVVGRL---------------------------- 293
Query: 397 LMLSGIGPRDHLEEMNIPVIEDLKVGYNLQDHVS---MAGLVFLVNDSVTIVESQFQKPR 453
VG NLQDH+ NDSV S F K
Sbjct: 294 ----------------------PGVGQNLQDHLEIYVAFEATEPTNDSVL---SLFSKLG 328
Query: 454 YIVDYWFRRQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLG 513
D + + + E + S PD + F P L G
Sbjct: 329 IGADRYLLTRDGPGATNHFEGGFVRSGP---AGEYPDGQYHFAPLPL-------AIRAAG 378
Query: 514 ISDKFYRKVYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDV 573
F V +RP SRG V LRS +P + P PNYLS D +
Sbjct: 379 AEHGFTLHVGP--------------MRPKSRGSVTLRSPDPDNRPVIDPNYLSAEGDRAI 424
Query: 574 LIEAIKMCA 582
I++
Sbjct: 425 FRAGIRLTR 433
>gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase. Choline dehydrogenase
catalyzes the conversion of exogenously supplied choline
into the intermediate glycine betaine aldehyde, as part
of a two-step oxidative reaction leading to the formation
of osmoprotectant betaine. This enzymatic system can be
found in both gram-positive and gram-negative bacteria.
As in Escherichia coli , Staphylococcus xylosus , and
Sinorhizobium meliloti, this enzyme is found associated
in a transciptionally co-induced gene cluster with
betaine aldehyde dehydrogenase, the second catalytic
enzyme in this reaction. Other gram-positive organisms
have been shown to employ a different enzymatic system,
utlizing a soluable choline oxidase or type III alcohol
dehydrogenase instead of choline dehydrogenase. This
enzyme is a member of the GMC oxidoreductase family
(pfam00732 and pfam05199), sharing a common evoluntionary
origin and enzymatic reaction with alcohol dehydrogenase.
Outgrouping from this model, Caulobacter crescentus
shares sequence homology with choline dehydrogenase, yet
other genes participating in this enzymatic reaction have
not currently been identified [Cellular processes,
Adaptations to atypical conditions].
Length = 532
Score = 267 bits (684), Expect = 3e-78
Identities = 159/482 (32%), Positives = 233/482 (48%), Gaps = 63/482 (13%)
Query: 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREE---SLLTDVPLFVSY-MVDTDFNWG 714
D+I+IG GS GSV+A RL+E+ + +VL+LEAG + LL +P ++Y + +NW
Sbjct: 1 DYIIIGGGSAGSVLAGRLSEDVSNSVLVLEAGGSDYPWDLLIQMPAALAYPAGNKRYNWI 60
Query: 715 YKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNW-EALGNPGWSYR 773
Y+TE + M+++ RGK +GG+S IN M+Y RG P D++ W + G W Y
Sbjct: 61 YETEPEPH----MNNRRVGHARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGMESWDYA 116
Query: 774 DVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVDHCE 833
D LPY+K+ E PY G G +KV + PL AF+EAG E GY++
Sbjct: 117 DCLPYYKRLETTFGGE---KPYRGHDGPIKVRRGPADNPLFQAFIEAGVEAGYNKTPDVN 173
Query: 834 --NPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVE 891
GF + + G R SA++A++ P KR NL+V A VTKI + R GVE
Sbjct: 174 GFRQEGFGPMDSTVHNGRRVSAARAYLHPAMKRPNLEVQTRAFVTKINFE--GNRATGVE 231
Query: 892 FSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLK-VGYNMQD 950
F K + + KEVILSAG +NSPQLL LSG+G HL EL I L VG N+QD
Sbjct: 232 FKKGGRKEHTEANKEVILSAGAINSPQLLQLSGIGDAEHLRELGIEPRIHLPGVGENLQD 291
Query: 951 HLSMAGLVFLVNSSVTIVES--KYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKYAED 1008
HL + + V++ S +P +L G E F + +D
Sbjct: 292 HLEVY-VQHACKQPVSLYPSLNWLKQPFIGAQWLFGRKG-AGASNHFEGGGF--VRSNDD 347
Query: 1009 PNHPDMEIVFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLVRPRSRG 1068
++P+++ F P A+ D + P++ G
Sbjct: 348 VDYPNIQYHFLPVAIRYDGTKA---------------------------------PKAHG 374
Query: 1069 F-------VRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQ 1121
F SRG VK++S +PF+ P+ NY+S D EAI++ E+ + +A+
Sbjct: 375 FQVHVGPMYSNSRGHVKIKSKDPFEKPEIVFNYMSHEEDWREFREAIRVTREILKQKALD 434
Query: 1122 KY 1123
Y
Sbjct: 435 PY 436
Score = 239 bits (610), Expect = 3e-68
Identities = 165/539 (30%), Positives = 239/539 (44%), Gaps = 123/539 (22%)
Query: 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILD---EIPLFVSHIVSSD-FNWG 104
D+I++G GS GSV+A RL+E+ + +VL+LEAG + D ++P +++ + +NW
Sbjct: 1 DYIIIGGGSAGSVLAGRLSEDVSNSVLVLEAGGSDYPWDLLIQMPAALAYPAGNKRYNWI 60
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
Y TE M N+R RGKV+GG+S N M+Y RG P DY+ WA P
Sbjct: 61 YETEPE----PHMNNRRVGHARGKVLGGSSSINGMIYQRGNPMDYEKWAKP--------- 107
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G W + + LPY+K+ ++T PY G G
Sbjct: 108 -----------------------EGMESWDYADCLPYYKR---LETTFGGEKPYRGHDGP 141
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIV-DPSEPNAIGFSYVLANTGNGERYSASRAFLR 283
+K+ R PL + ++AG E GY+ D + GF + + NG R SA+RA+L
Sbjct: 142 IKVRRGPADNPLFQAFIEAGVEAGYNKTPDVNGFRQEGFGPMDSTVHNGRRVSAARAYLH 201
Query: 284 PIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGALNSP 343
P KRPNL+V RA VTK+ + N RATGVEF K ++ A KEVILSAGA+NSP
Sbjct: 202 PAMKRPNLEVQTRAFVTKINFEGN----RATGVEFKKGGRKEHTEANKEVILSAGAINSP 257
Query: 344 QLLMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDHVSMAGLVFLVNDSVTIVELLMLSGIG 403
QLL LSGIG +HL E+ I
Sbjct: 258 QLLQLSGIGDAEHLRELGIE---------------------------------------- 277
Query: 404 PRDHLEEMNIPVIEDLKVGYNLQDHVSMAGLVFLVNDSVTIVES--QFQKPRYIVDYWFR 461
P I VG NLQDH+ + + V++ S ++P + F
Sbjct: 278 ----------PRIHLPGVGENLQDHLEVY-VQHACKQPVSLYPSLNWLKQPFIGAQWLFG 326
Query: 462 RQGPYTSPGGAETMALISSKFENDKTRPDIELVFGPGALTGDSNGSLRSLLGISDKFYRK 521
R+G S E + S + D P+I+ F P A+ D + ++
Sbjct: 327 RKGAGAS-NHFEGGGFVRSNDDVDY--PNIQYHFLPVAIRYDGTKAPKA----------H 373
Query: 522 VYQPYFERQAYNIVPLILRPFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKM 580
+Q + SRG VK++S +PF+ P+ NY+S D EAI++
Sbjct: 374 GFQVHV---GPMYSN------SRGHVKIKSKDPFEKPEIVFNYMSHEEDWREFREAIRV 423
>gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family. This model
describes a set of dehydrogenases belonging to the
glucose-methanol-choline oxidoreductase (GMC
oxidoreductase) family. Members of the present family are
restricted to Actinobacterial genome contexts containing
also members of families TIGR03962 and TIGR03969 (the
mycofactocin system), and are proposed to be uniform in
function.
Length = 487
Score = 186 bits (474), Expect = 1e-50
Identities = 137/472 (29%), Positives = 195/472 (41%), Gaps = 94/472 (19%)
Query: 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAG-------REESLLTDVPLFVSYMVDTDF 711
D +V+G GS G V+A RL+E+P+ TV +LEAG R + LTD L + +
Sbjct: 2 DVLVVGGGSAGCVVAARLSEDPSCTVTVLEAGPGYRDPSRLPAQLTD-GLRLPIGPASPV 60
Query: 712 NWGYKTEKDERFCRGMSDQTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWS 771
W Y E + R + RG+ +GG+ +N + R +P DFD W PGWS
Sbjct: 61 VWRYGVELTDGPRRASA-----IVRGRVLGGSGAVNGGYFCRALPADFDAW---PIPGWS 112
Query: 772 YRDVLPYFKKSE-DISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVD 830
+ DVLP+F+ E D+ P HG G + V +T+ +SAAF+ A G+ +
Sbjct: 113 WDDVLPHFRAIETDLDFDG----PLHGTAGPIPVRRTAELDGISAAFVAAALGAGFGWIA 168
Query: 831 -----HCENPIGFSYVLANKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITK 885
+ P G V N G R S + A++ P KR NL V + RV +IL
Sbjct: 169 DLNGSGPDAPTGVGAVPLNVDGGRRVSTAVAYLLPALKRPNLTVEADTRVVRILFS--GT 226
Query: 886 RTYGVEFSKNRKSYTVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLKVG 945
R GVE + T++ + V+L AG + S LL+LSG+GP L I V+ DL VG
Sbjct: 227 RAVGVEVLGDGGPRTLRADR-VVLCAGAVESAHLLLLSGIGPAEQLRAAGIAVVLDLPVG 285
Query: 946 YNMQDHLSMAGLVFLVNSSVTIVESKYTKPRYLMDFLVNGAGPLTLPGGAEALAFYPTKY 1005
+ DH + ++ P T P L
Sbjct: 286 SDFVDHPEWV------------LPYRWRPTHDR---------PDTSPVLETVL------- 317
Query: 1006 AEDPNHPDMEI---VFGPGALTGDSGGSLRKVLGISDKFYNKVYRPFAEREAYSIVPVLV 1062
N D+EI G AL S R+ + L+
Sbjct: 318 ----NTADIEIRPYTAGFTALVPGSP-----------------------RDDPHLGVALM 350
Query: 1063 RPRSRGFVRLSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVEL 1114
RP SRG +R L S++P D P+ Y S + D L +A EL
Sbjct: 351 RPHSRGRIR-------LASADPADPPRIEHRYDSSAADRAALRAGAALAHEL 395
Score = 176 bits (449), Expect = 3e-47
Identities = 111/344 (32%), Positives = 152/344 (44%), Gaps = 69/344 (20%)
Query: 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP--------EEIILDEIPLFVSHIVSSD 100
D +VVG GS G VVA RL+E+ + TV +LEAGP + D + L + +S
Sbjct: 2 DVLVVGGGSAGCVVAARLSEDPSCTVTVLEAGPGYRDPSRLPAQLTDGLRLPIG--PASP 59
Query: 101 FNWGYTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTG 160
W Y E TDG + RG+V+GG+ N + R +P D+D W P
Sbjct: 60 VVWRYGVELTDG-----PRRASAIVRGRVLGGSGAVNGGYFCRALPADFDAWPIP----- 109
Query: 161 KVMGGTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSE---DMKTAELKSSP 217
GWS+++VLP+F+ E D P
Sbjct: 110 -------------------------------GWSWDDVLPHFRAIETDLDFDG------P 132
Query: 218 YHGVGGYLKIERPLWRTPLAKCVLDAGHEMGY-DIVD--PSEPNA-IGFSYVLANTGNGE 273
HG G + + R ++ + A G+ I D S P+A G V N G
Sbjct: 133 LHGTAGPIPVRRTAELDGISAAFVAAALGAGFGWIADLNGSGPDAPTGVGAVPLNVDGGR 192
Query: 274 RYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEV 333
R S + A+L P KRPNL V RV ++L RA GVE + T+RA + V
Sbjct: 193 RVSTAVAYLLPALKRPNLTVEADTRVVRILFSGT----RAVGVEVLGDGGPRTLRADR-V 247
Query: 334 ILSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDH 377
+L AGA+ S LL+LSGIGP + L I V+ DL VG + DH
Sbjct: 248 VLCAGAVESAHLLLLSGIGPAEQLRAAGIAVVLDLPVGSDFVDH 291
>gnl|CDD|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase. This family of
proteins bind FAD as a cofactor.
Length = 218
Score = 158 bits (402), Expect = 6e-44
Identities = 70/231 (30%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 730 QTCNWPRGKAMGGTSVINYMVYSRGVPQDFDNWEAL-GNPGWSYRDVLPYFKKSE-DISV 787
+ P G +GG S +N+ R D W + G GW Y D LPY K E + V
Sbjct: 17 RRMILPAGSTVGGGSSVNWSACIRTPAAVLDEWASEFGLEGWGYDDYLPYMDKVEGPLGV 76
Query: 788 SRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVDHCENPIGFSY----VLA 843
+ PL+ A L+A ELGY N G Y L
Sbjct: 77 TT--KGIEES--------------PLNQALLKAAEELGYPVEAVPRNSNGCHYCGFCGLG 120
Query: 844 NKIRGARQSASKAFIRPIRKRHNLKVAKEARVTKILIDPITKRTYGVEFS--KNRKSYTV 901
GA+QS ++ ++RP +R NL++ A+ KI+I R GVE +
Sbjct: 121 CP-TGAKQSTARTWLRPALER-NLRILTGAKAEKIIILGRGGRAVGVEARDGGGGIKRLI 178
Query: 902 KCRKEVILSAGTLNSPQLLMLSGVGPRPHLEELNIPVIQDLKVGYNMQDHL 952
KEV+++AG LN+P LL+ SG+G PH VG N+Q H
Sbjct: 179 TAAKEVVVAAGALNTPPLLLRSGLGKNPH------------PVGKNLQLHP 217
Score = 151 bits (384), Expect = 2e-41
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 157 IPTGKVMGGTSVTNYMVYTRGVPHDYDGWAAL-GNIGWSFEEVLPYFKKSEDMKTAELKS 215
+P G +GG S N+ R D WA+ G GW +++ LPY K E L
Sbjct: 21 LPAGSTVGGGSSVNWSACIRTPAAVLDEWASEFGLEGWGYDDYLPYMDKVE----GPLGV 76
Query: 216 SPYHGVGGYLKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSYV---LANTGNG 272
+ + + +PL + +L A E+GY V+ N+ G Y G
Sbjct: 77 TT-----------KGIEESPLNQALLKAAEELGYP-VEAVPRNSNGCHYCGFCGLGCPTG 124
Query: 273 ERYSASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEF--FKNKQRHTVRAR 330
+ S +R +LRP +R NL++ A+ K++I RA GVE + + A
Sbjct: 125 AKQSTARTWLRPALER-NLRILTGAKAEKIIILGRG--GRAVGVEARDGGGGIKRLITAA 181
Query: 331 KEVILSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLKVGYNLQDH 377
KEV+++AGALN+P LL+ SG+G H VG NLQ H
Sbjct: 182 KEVVVAAGALNTPPLLLRSGLGKNPH------------PVGKNLQLH 216
>gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD.
Length = 587
Score = 93.7 bits (233), Expect = 2e-19
Identities = 99/378 (26%), Positives = 153/378 (40%), Gaps = 94/378 (24%)
Query: 609 LFSLVCHLLLLSVAHAQSQLFRTFINMVSKDAILTPSNIVQDTKIFEKEYDFIVIGAGSG 668
LF L+ L S + +S + K + + S+ + + YD+IV+G G+
Sbjct: 7 LFLLLLCLPTSSSSQGKSHFTPYRYPFIDKASSFSSSSSSSSSSGGDSAYDYIVVGGGTA 66
Query: 669 GSVIANRLTENPNWTVLLLEAGREESLLTDVPLF---VSYMVDTDFNWGYKTEKDERFCR 725
G +A L++N ++VLLLE G VP VS++ E F
Sbjct: 67 GCPLAATLSQN--FSVLLLERG-------GVPFGNANVSFL--------------ENFHI 103
Query: 726 GMSDQTCNWP-------------RGKAMGGTSVINYMVYSRGVPQDFDNWEALGNPGWSY 772
G++D + R + +GG + IN YSR + + GW
Sbjct: 104 GLADTSPTSASQAFISTDGVINARARVLGGGTCINAGFYSRASTR------FIQKAGWDA 157
Query: 773 RDVLPYFKKSEDISVSRLKGSPYHGIGGYLKVEQTSWRTPLSAAFLEAGSELGYDQVDHC 832
+ V + E V K +P W+ L + LE G
Sbjct: 158 KLVNESYPWVERQIVHWPKVAP--------------WQAALRDSLLEVGV---------- 193
Query: 833 ENPI-GFSY--VLANKIRGA-------RQSASK--AFIRPIRKRHNLKVAKEARVTKILI 880
+P GF+Y V K+ G R +A++ A P + L+V A V KI+
Sbjct: 194 -SPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNP----NKLRVLLHATVQKIVF 248
Query: 881 DPITK--RTYGVEFS-KNRKSY----TVKCRKEVILSAGTLNSPQLLMLSGVGPRPHLEE 933
D K R GV F +N + + E+ILSAG + SPQ+L+LSG+GP+ L++
Sbjct: 249 DTSGKRPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKK 308
Query: 934 LNIPVIQDLK-VGYNMQD 950
IPV+ + VG M D
Sbjct: 309 HKIPVVLHNEHVGKGMAD 326
Score = 92.2 bits (229), Expect = 5e-19
Identities = 89/347 (25%), Positives = 132/347 (38%), Gaps = 90/347 (25%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEEIILDEIPLFVS-HIVSSDFNWG 104
YD+IVVG G+ G +A L++N ++VLLLE G + + HI +D
Sbjct: 54 SAYDYIVVGGGTAGCPLAATLSQN--FSVLLLERGGVPFGNANVSFLENFHIGLAD---- 107
Query: 105 YTTEKTDGICKGMKNQRCNWPRGKVMGGTSVTNYMVYTRGVPHDYDGWAAPKIPTGKVMG 164
TS + + T GV + A +V+G
Sbjct: 108 -------------------------TSPTSASQAFISTDGV---INARA-------RVLG 132
Query: 165 GTSVTNYMVYTRGVPHDYDGWAALGNIGWSFEEVLPYFKKSEDMKTAELKSSPYHGVGGY 224
G + N Y+R + GW + V + E K +P
Sbjct: 133 GGTCINAGFYSRAST------RFIQKAGWDAKLVNESYPWVERQIVHWPKVAP------- 179
Query: 225 LKIERPLWRTPLAKCVLDAGHEMGYDIVDPSEPNAIGFSY-VLANTG--------NGERY 275
W+ L +L+ G V P GF+Y + T G R+
Sbjct: 180 -------WQAALRDSLLEVG-------VSPFN----GFTYDHVYGTKVGGTIFDEFGRRH 221
Query: 276 SASRAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRH-----TVRAR 330
+A A L L+V A V K++ D + RATGV F +
Sbjct: 222 TA--AELLAAGNPNKLRVLLHATVQKIVFDTSGKRPRATGVIFKDENGNQHQAFLSNNKG 279
Query: 331 KEVILSAGALNSPQLLMLSGIGPRDHLEEMNIPVIQDLK-VGYNLQD 376
E+ILSAGA+ SPQ+L+LSGIGP+ L++ IPV+ + VG + D
Sbjct: 280 SEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPVVLHNEHVGKGMAD 326
Score = 37.1 bits (86), Expect = 0.064
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 509 RSLLGISDKFYRKVYQPYFERQAYN---IVPLILRPFSRGFVKLRSSNPFDSPKFYPNYL 565
R+ I +RK P +A+N I+ I P S G + L ++N D+P NY
Sbjct: 392 RTPEAIQAYIHRKKNLP---HEAFNGGFILEKIAGPISTGHLSLINTNVDDNPSVTFNYF 448
Query: 566 SDSRDLDVLIEAIKM 580
+DL + I+
Sbjct: 449 KHPQDLQRCVYGIRT 463
Score = 30.9 bits (70), Expect = 4.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 1072 LSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSET 1117
+S G + L ++N D+P NY +DL + I+ ++ +T
Sbjct: 425 ISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKT 470
>gnl|CDD|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase. This domain found
associated with pfam00732.
Length = 139
Score = 75.1 bits (185), Expect = 9e-16
Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 10/103 (9%)
Query: 1072 LSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMAVELSETRAMQKYASKLLPVK 1131
SRG V L SS+P P PNYLSD DL L A+++A + +L P
Sbjct: 2 RSRGRVTLSSSDPLGLPVIDPNYLSDPADLAALRAALRLARRILAAA-----LVELTPGP 56
Query: 1132 FPGCEPYEFRSDEYWACAARQLTTNLHHQIC-----PHIADAV 1169
SD+ R H + D V
Sbjct: 57 VEVVPGAAEASDDEILEYIRAAAVTSWHPMGTCRMGADPDDGV 99
Score = 56.2 bits (136), Expect = 3e-09
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 541 PFSRGFVKLRSSNPFDSPKFYPNYLSDSRDLDVLIEAIKMCA 582
P SRG V L SS+P P PNYLSD DL L A+++
Sbjct: 1 PRSRGRVTLSSSDPLGLPVIDPNYLSDPADLAALRAALRLAR 42
>gnl|CDD|224169 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex,
dihydrolipoamide dehydrogenase (E3) component, and
related enzymes [Energy production and conversion].
Length = 454
Score = 39.5 bits (93), Expect = 0.010
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692
KEYD +VIGAG G V A R + V L+E G
Sbjct: 1 MMKEYDVVVIGAGPAGYVAAIRAAQLG-LKVALVEKGER 38
Score = 37.2 bits (87), Expect = 0.053
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 44 FAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82
+EYD +V+G+G G V A R + V L+E G
Sbjct: 1 MMKEYDVVVIGAGPAGYVAAIRAAQLG-LKVALVEKGER 38
>gnl|CDD|180854 PRK07121, PRK07121, hypothetical protein; Validated.
Length = 492
Score = 37.9 bits (89), Expect = 0.034
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 852 SASKAFIRPIRKR---HNLKVAKEARVTKILIDPITKRTYGVEFSKNRKSYTVKCRKEVI 908
+ P+ KR +++ + R T++++D R GVE + ++ ++ RK V+
Sbjct: 174 GGGAMLMDPLAKRAAALGVQIRYDTRATRLIVDD-DGRVVGVEARRYGETVAIRARKGVV 232
Query: 909 LSAG 912
L+AG
Sbjct: 233 LAAG 236
Score = 37.6 bits (88), Expect = 0.042
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 276 SASRAFLRPIRKR---PNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKE 332
+ P+ KR +++ R T++++D++ R GVE + + +RARK
Sbjct: 174 GGGAMLMDPLAKRAAALGVQIRYDTRATRLIVDDD---GRVVGVEARRYGETVAIRARKG 230
Query: 333 VILSAG 338
V+L+AG
Sbjct: 231 VVLAAG 236
>gnl|CDD|235701 PRK06116, PRK06116, glutathione reductase; Validated.
Length = 450
Score = 37.1 bits (87), Expect = 0.056
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 656 KEYDFIVIGAGSGGSVIANR 675
K+YD IVIG GSGG ANR
Sbjct: 3 KDYDLIVIGGGSGGIASANR 22
Score = 31.7 bits (73), Expect = 2.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 45 AEEYDFIVVGSGSGGSVVANR 65
++YD IV+G GSGG ANR
Sbjct: 2 TKDYDLIVIGGGSGGIASANR 22
>gnl|CDD|235774 PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated.
Length = 460
Score = 37.1 bits (87), Expect = 0.061
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 656 KEYDFIVIGAGSGGSVIANRL 676
++YD IVIGAG G V A R
Sbjct: 2 EKYDVIVIGAGPAGYVAARRA 22
Score = 35.5 bits (83), Expect = 0.17
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81
E+YD IV+G+G G V A R + V L+E GP
Sbjct: 2 EKYDVIVIGAGPAGYVAARRAAKLGK-KVALIEKGP 36
>gnl|CDD|185420 PTZ00058, PTZ00058, glutathione reductase; Provisional.
Length = 561
Score = 36.9 bits (85), Expect = 0.063
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 616 LLLLSVAHAQSQLFRTFINMVSKDAILTPSNIVQDTKIFEKEYDFIVIGAGSGGSVIANR 675
LL ++ + +L R+F + +A P+++ + ++ YD IVIG GSGG A R
Sbjct: 10 LLFFALLNPSIKLIRSFSFYHNLEASSAPTHLKKKPRM---VYDLIVIGGGSGGMAAARR 66
Query: 676 LTENP 680
N
Sbjct: 67 AARNK 71
Score = 31.5 bits (71), Expect = 3.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 48 YDFIVVGSGSGGSVVANRLTEN 69
YD IV+G GSGG A R N
Sbjct: 49 YDLIVIGGGSGGMAAARRAARN 70
>gnl|CDD|235787 PRK06370, PRK06370, mercuric reductase; Validated.
Length = 463
Score = 36.7 bits (86), Expect = 0.078
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLE 78
A+ YD IV+G+G G +A R V L+E
Sbjct: 3 AQRYDAIVIGAGQAGPPLAARAAG-LGMKVALIE 35
Score = 36.7 bits (86), Expect = 0.079
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691
+ YD IVIGAG G +A R V L+E G
Sbjct: 4 QRYDAIVIGAGQAGPPLAARAAG-LGMKVALIERGL 38
>gnl|CDD|223652 COG0579, COG0579, Predicted dehydrogenase [General function
prediction only].
Length = 429
Score = 36.1 bits (84), Expect = 0.12
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLE 688
+YD ++IG G G+ A L+E P+ +V LLE
Sbjct: 1 MMDYDVVIIGGGIMGAATAYELSEYEPDLSVALLE 35
>gnl|CDD|130488 TIGR01421, gluta_reduc_1, glutathione-disulfide reductase,
animal/bacterial. The tripeptide glutathione is an
important reductant, e.g., for maintaining the cellular
thiol/disulfide status and for protecting against
reactive oxygen species such as hydrogen peroxide.
Glutathione-disulfide reductase regenerates reduced
glutathione from oxidized glutathione (glutathione
disulfide) + NADPH. This model represents one of two
closely related subfamilies of glutathione-disulfide
reductase. Both are closely related to trypanothione
reductase, and separate models are built so each of the
three can describe proteins with conserved function.
This model describes glutathione-disulfide reductases of
animals, yeast, and a number of animal-resident bacteria
[Energy metabolism, Electron transport].
Length = 450
Score = 35.6 bits (82), Expect = 0.18
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTE 678
K YD++VIG GSGG A R E
Sbjct: 1 KHYDYLVIGGGSGGIASARRAAE 23
Score = 32.5 bits (74), Expect = 1.4
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEA 79
YD++V+G GSGG A R E+ LL+EA
Sbjct: 2 HYDYLVIGGGSGGIASARRAAEHGA-KALLVEA 33
>gnl|CDD|235798 PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.
Length = 462
Score = 34.7 bits (81), Expect = 0.28
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 654 FEKEYDFIVIGAGSGGSVIANRLTE 678
F EYD IVIGAG GG V A R +
Sbjct: 1 FAFEYDVIVIGAGPGGYVAAIRAAQ 25
Score = 34.4 bits (80), Expect = 0.39
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 44 FAEEYDFIVVGSGSGGSVVANRLTE 68
FA EYD IV+G+G GG V A R +
Sbjct: 1 FAFEYDVIVIGAGPGGYVAAIRAAQ 25
>gnl|CDD|181346 PRK08275, PRK08275, putative oxidoreductase; Provisional.
Length = 554
Score = 35.0 bits (81), Expect = 0.28
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 650 DTKIFEKEYDFIVIGAGSGGSVIANRLTE-NPNWTVLLLE 688
E E D +VIG G+ G + A + E NP VLLLE
Sbjct: 2 AMNTQEVETDILVIGGGTAGPMAAIKAKERNPALRVLLLE 41
>gnl|CDD|205628 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain.
Length = 66
Score = 31.3 bits (72), Expect = 0.33
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 52 VVGSGSGGSVVANRLTENSNWTVLLLEAGP 81
+VG+G G V A L + VL+LE
Sbjct: 1 IVGAGLSGLVAAYLLAKR-GKDVLVLEKRD 29
Score = 30.9 bits (71), Expect = 0.39
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 662 VIGAGSGGSVIANRLTENPNWTVLLLEAG 690
++GAG G V A L + VL+LE
Sbjct: 1 IVGAGLSGLVAAYLLAKR-GKDVLVLEKR 28
>gnl|CDD|223737 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino
acid transport and metabolism].
Length = 387
Score = 34.1 bits (78), Expect = 0.40
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691
+ D ++IG G G A L E V +LEAG
Sbjct: 2 SMKMDVVIIGGGIVGLSAAYYLAER-GADVTVLEAGE 37
Score = 30.3 bits (68), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGP 81
+ D +++G G G A L E V +LEAG
Sbjct: 3 MKMDVVIIGGGIVGLSAAYYLAER-GADVTVLEAGE 37
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase. This family includes
various FAD dependent oxidoreductases:
Glycerol-3-phosphate dehydrogenase EC:1.1.99.5,
Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine
oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Length = 234
Score = 33.4 bits (77), Expect = 0.46
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGR 691
D +VIG G G A L +V LLE G
Sbjct: 1 DVVVIGGGIVGLSTAYELAR-RGLSVTLLERGD 32
>gnl|CDD|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production
and conversion].
Length = 396
Score = 34.0 bits (78), Expect = 0.47
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692
EYD +++GAG GS A RL + VL+LE G E
Sbjct: 1 MMEYDVVIVGAGPAGSSAARRLAKA-GLDVLVLEKGSE 37
Score = 33.6 bits (77), Expect = 0.56
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 46 EEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82
EYD ++VG+G GS A RL + VL+LE G E
Sbjct: 2 MEYDVVIVGAGPAGSSAARRLAKA-GLDVLVLEKGSE 37
>gnl|CDD|223636 COG0562, Glf, UDP-galactopyranose mutase [Cell envelope
biogenesis, outer membrane].
Length = 374
Score = 33.8 bits (78), Expect = 0.47
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLEA 79
+D+++VG+G G+V+A + VL++E
Sbjct: 2 FDYLIVGAGLSGAVIAEVAAQ-LGKRVLIVEK 32
Score = 33.5 bits (77), Expect = 0.70
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEA 689
+D++++GAG G+VIA + VL++E
Sbjct: 2 FDYLIVGAGLSGAVIAEVAAQL-GKRVLIVEK 32
>gnl|CDD|223108 COG0029, NadB, Aspartate oxidase [Coenzyme metabolism].
Length = 518
Score = 34.2 bits (79), Expect = 0.48
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 279 RAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFK-NKQRHTVRARKEVILSA 337
A L+ +R RPN+ V + A ++I++ GV N + T RA K V+L+
Sbjct: 137 TALLKKVRNRPNITVLEGAEALDLIIEDG---IGVAGVLVLNRNGELGTFRA-KAVVLAT 192
Query: 338 GAL 340
G L
Sbjct: 193 GGL 195
>gnl|CDD|240384 PTZ00367, PTZ00367, squalene epoxidase; Provisional.
Length = 567
Score = 33.7 bits (77), Expect = 0.63
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 8 LVFIVGAQGQVFRRIVDRIIKDNLLTPSDAVPDLKSFAEEYDFIVVGSGSGGSVVANRLT 67
V V + + RI+ R+ T D YD I+VG G V+A L+
Sbjct: 5 TVLCVVSTLLLLNRILSRLRFKPARTNYD-----------YDVIIVGGSIAGPVLAKALS 53
Query: 68 ENSNWTVLLLE 78
+ VL+LE
Sbjct: 54 K-QGRKVLMLE 63
Score = 31.4 bits (71), Expect = 3.1
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLE 688
+YD I++G G V+A L++ VL+LE
Sbjct: 32 YDYDVIIVGGSIAGPVLAKALSKQ-GRKVLMLE 63
>gnl|CDD|232791 TIGR00031, UDP-GALP_mutase, UDP-galactopyranose mutase. This
enzyme is involved in the conversion of UDP-GALP into
UDP-GALF through a 2-keto intermediate. It contains FAD
as a cofactor. The gene is known as glf, ceoA, and
rfbD. It is known experimentally in E. coli,
Mycobacterium tuberculosis, and Klebsiella pneumoniae
[Cell envelope, Biosynthesis and degradation of surface
polysaccharides and lipopolysaccharides].
Length = 377
Score = 33.6 bits (77), Expect = 0.64
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 48 YDFIVVGSGSGGSVVANRLTENSNWTVLLLE 78
+D+I+VG+G G V+AN L N VL++E
Sbjct: 2 FDYIIVGAGLSGIVLANILA-QLNKRVLVVE 31
Score = 32.8 bits (75), Expect = 1.1
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLE 688
+D+I++GAG G V+AN L N VL++E
Sbjct: 2 FDYIIVGAGLSGIVLANILA-QLNKRVLVVE 31
>gnl|CDD|237225 PRK12843, PRK12843, putative FAD-binding dehydrogenase; Reviewed.
Length = 578
Score = 33.6 bits (77), Expect = 0.72
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 281 FLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAGAL 340
L +R R +++ + V + D R G + R +RAR V+L+ G
Sbjct: 227 LLYSLRAR-GVRILTQTDVESLETDHG----RVIGATVVQGGVRRRIRARGGVVLATGGF 281
Query: 341 N-SPQLL 346
N PQL
Sbjct: 282 NRHPQLR 288
>gnl|CDD|130849 TIGR01789, lycopene_cycl, lycopene cyclase. This model represents
a family of bacterial lycopene cyclases catalyzing the
transformation of lycopene to carotene. These enzymes
are found in a limited spectrum of alpha and gamma
proteobacteria as well as Flavobacterium.
Length = 370
Score = 32.9 bits (75), Expect = 0.91
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 659 DFIVIGAGSGGSVIANRLTE-NPNWTVLLLEAGRE 692
D I++G G G +IA RL P++ + ++EAGR
Sbjct: 1 DCIIVGGGLAGGLIALRLQRARPDFRIRVIEAGRT 35
>gnl|CDD|233671 TIGR01988, Ubi-OHases, Ubiquinone biosynthesis hydroxylase,
UbiH/UbiF/VisC/COQ6 family. This model represents a
family of FAD-dependent hydroxylases (monooxygenases)
which are all believed to act in the aerobic ubiquinone
biosynthesis pathway. A separate set of hydroxylases, as
yet undiscovered, are believed to be active under
anaerobic conditions. In E. coli three enzyme activities
have been described, UbiB (which acts first at position
6, see TIGR01982), UbiH (which acts at position 4,) and
UbiF (which acts at position 5,). UbiH and UbiF are
similar to one another and form the basis of this
subfamily. Interestingly, E. coli contains another
hydroxylase gene, called visC, that is highly similar to
UbiF, adjacent to UbiH and, when mutated, results in a
phenotype similar to that of UbiH (which has also been
named visB). Several other species appear to have three
homologs in this family, although they assort themselves
differently on phylogenetic trees (e.g. Xylella and
Mesorhizobium) making it difficult to ascribe a specific
activity to each one. Eukaryotes appear to have only a
single homolog in this subfamily (COQ6,) which
complements UbiH, but also possess a non-orthologous
gene, COQ7 which complements UbiF [Biosynthesis of
cofactors, prosthetic groups, and carriers, Menaquinone
and ubiquinone].
Length = 387
Score = 32.6 bits (75), Expect = 1.5
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLEAGREESLLTDVP 700
D +++G G G +A L + V L+EA +
Sbjct: 1 DIVIVGGGPVGLALALALARSGGLKVALIEATPLPAPADPGF 42
Score = 31.8 bits (73), Expect = 2.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 49 DFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPEE 83
D ++VG G G +A L + V L+EA P
Sbjct: 1 DIVIVGGGPVGLALALALARSGGLKVALIEATPLP 35
>gnl|CDD|215314 PLN02576, PLN02576, protoporphyrinogen oxidase.
Length = 496
Score = 32.3 bits (74), Expect = 1.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 36 DAVPDLKSFAEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEA 79
A+ + + A D VVG+G G A L VL+ EA
Sbjct: 1 SAIAEGSAAASSKDVAVVGAGVSGLAAAYALASKHGVNVLVTEA 44
Score = 30.4 bits (69), Expect = 6.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 656 KEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEA 689
D V+GAG G A L VL+ EA
Sbjct: 11 SSKDVAVVGAGVSGLAAAYALASKHGVNVLVTEA 44
>gnl|CDD|144362 pfam00731, AIRC, AIR carboxylase. Members of this family catalyze
the decarboxylation of
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate
(AIR). This family catalyze the sixth step of de novo
purine biosynthesis. Some members of this family contain
two copies of this domain.
Length = 150
Score = 30.9 bits (71), Expect = 1.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 566 SDSRDLDVLIEAIKMCALFSLVCHLLVLSVAH 597
SDS DL + +A K+ F + + V+S AH
Sbjct: 9 SDS-DLPTMEKAAKVLKEFGIPYEVRVVS-AH 38
>gnl|CDD|218770 pfam05834, Lycopene_cycl, Lycopene cyclase protein. This family
consists of lycopene beta and epsilon cyclase proteins.
Carotenoids with cyclic end groups are essential
components of the photosynthetic membranes in all
plants, algae, and cyanobacteria. These lipid-soluble
compounds protect against photo-oxidation, harvest light
for photosynthesis, and dissipate excess light energy
absorbed by the antenna pigments. The cyclisation of
lycopene (psi, psi-carotene) is a key branch point in
the pathway of carotenoid biosynthesis. Two types of
cyclic end groups are found in higher plant carotenoids:
the beta and epsilon rings. Carotenoids with two beta
rings are ubiquitous, and those with one beta and one
epsilon ring are common; however, carotenoids with two
epsilon rings are rare.
Length = 374
Score = 31.9 bits (73), Expect = 2.2
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 659 DFIVIGAGSGGSVIANRLTEN-PNWTVLLLEAGRE 692
D +++GAG G ++A RL + P VLL++AG
Sbjct: 1 DLVIVGAGLAGLLLALRLRQARPGLRVLLIDAGPG 35
>gnl|CDD|181142 PRK07846, PRK07846, mycothione reductase; Reviewed.
Length = 451
Score = 31.8 bits (73), Expect = 2.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 47 EYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAG 80
YD I++G+GSG S++ R ++ + ++E G
Sbjct: 1 HYDLIIIGTGSGNSILDER---FADKRIAIVEKG 31
Score = 30.3 bits (69), Expect = 7.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLEAG 690
YD I+IG GSG S++ R + + ++E G
Sbjct: 1 HYDLIIIGTGSGNSILDERFAD---KRIAIVEKG 31
>gnl|CDD|178267 PLN02661, PLN02661, Putative thiazole synthesis.
Length = 357
Score = 31.7 bits (72), Expect = 2.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 657 EYDFIVIGAGSGGSVIANRLTENPNWTVLLLE 688
+ D +++GAGS G A L++NPN V ++E
Sbjct: 92 DTDVVIVGAGSAGLSCAYELSKNPNVKVAIIE 123
>gnl|CDD|233693 TIGR02032, GG-red-SF, geranylgeranyl reductase family. This model
represents a subfamily which includes geranylgeranyl
reductases involved in chlorophyll and
bacteriochlorophyll biosynthesis as well as other
related enzymes which may also act on geranylgeranyl
groups or related substrates [Biosynthesis of cofactors,
prosthetic groups, and carriers, Chlorophyll and
bacteriochlorphyll].
Length = 295
Score = 31.1 bits (71), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 658 YDFIVIGAGSGGSVIANRLTENPNWTVLLLEAGRE 692
YD +V+GAG G+ A + VLLLE
Sbjct: 1 YDVVVVGAGPAGA-SAAYRLADKGLRVLLLEKKSF 34
>gnl|CDD|218553 pfam05317, Thermopsin, Thermopsin. This family consists of several
thermopsin proteins from archaebacteria. Thermopsin is a
thermostable acid protease which is capable of
hydrolysing the following bonds: Leu-Val, Leu-Tyr,
Phe-Phe, Phe-Tyr, and Tyr-Thr. The specificity of
thermopsin is therefore similar to that of pepsin, that
is, it prefers large hydrophobic residues at both sides
of the scissile bond.
Length = 267
Score = 31.2 bits (71), Expect = 3.3
Identities = 27/121 (22%), Positives = 39/121 (32%), Gaps = 42/121 (34%)
Query: 422 GYNLQDHVSMAGLVFLVNDSVTIVESQFQKPRYIVDYWFRRQGPYTSPGGAETMALISSK 481
GY + + S++ + D+VTI +VD G + G
Sbjct: 169 GYVILQNGSISSNWY---DTVTINNPGASSAYILVD------GYSYTGLG---------- 209
Query: 482 FENDKTRPDIELVFGPGALTGDSNG------SLRSLLGISDKFYRK--VYQPYFERQAYN 533
D ELVFG G NG SL + L + +Y P AY+
Sbjct: 210 -----LPYDAELVFG-----GPGNGESTTFYSLNATLAL---YYLNGGSLTPV--PSAYS 254
Query: 534 I 534
Sbjct: 255 F 255
>gnl|CDD|183787 PRK12844, PRK12844, 3-ketosteroid-delta-1-dehydrogenase;
Reviewed.
Length = 557
Score = 31.3 bits (71), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 43 SFAEEYDFIVVGSGSGGSVVA 63
++ E YD +VVGSG GG A
Sbjct: 2 TWDETYDVVVVGSGGGGMCAA 22
>gnl|CDD|183292 PRK11728, PRK11728, hydroxyglutarate oxidase; Provisional.
Length = 393
Score = 30.6 bits (70), Expect = 5.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 658 YDFIVIGAGSGGSVIANRLTE-NPNWTVLLLE 688
YDF++IG G G A +L E P + +LE
Sbjct: 3 YDFVIIGGGIVGLSTAMQLQERYPGARIAVLE 34
>gnl|CDD|224154 COG1233, COG1233, Phytoene dehydrogenase and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 487
Score = 30.5 bits (69), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 655 EKEYDFIVIGAGSGGSVIANRLTENPNWTVLLLEA 689
YD +VIGAG G A L V +LE
Sbjct: 1 MPMYDVVVIGAGLNGLAAAALLARA-GLKVTVLEK 34
>gnl|CDD|183782 PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed.
Length = 549
Score = 30.3 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 45 AEEYDFIVVGSGSGGSVVANRLTENSNWTVLLLEAGPE 82
A + D IVVG+G G V A L + + VLLL+ E
Sbjct: 2 AMDADVIVVGAGLAGLVAAAELAD-AGKRVLLLDQENE 38
>gnl|CDD|223643 COG0569, TrkA, K+ transport systems, NAD-binding component
[Inorganic ion transport and metabolism].
Length = 225
Score = 29.9 bits (68), Expect = 7.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 659 DFIVIGAGSGGSVIANRLTENPNWTVLLLE 688
I+IGAG G +A L+E + V+L++
Sbjct: 2 KIIIIGAGRVGRSVARELSEEGH-NVVLID 30
>gnl|CDD|235660 PRK05976, PRK05976, dihydrolipoamide dehydrogenase; Validated.
Length = 472
Score = 30.3 bits (69), Expect = 7.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 655 EKEYDFIVIGAGSGGSVIANR 675
KEYD ++IG G GG V A R
Sbjct: 2 AKEYDLVIIGGGPGGYVAAIR 22
>gnl|CDD|233018 TIGR00551, nadB, L-aspartate oxidase. L-aspartate oxidase is the B
protein, NadB, of the quinolinate synthetase complex.
Quinolinate synthetase makes a precursor of the pyridine
nucleotide portion of NAD. This model identifies
proteins that cluster as L-aspartate oxidase (a
flavoprotein difficult to separate from the set of
closely related flavoprotein subunits of succinate
dehydrogenase and fumarate reductase) by both UPGMA and
neighbor-joining trees. The most distant protein
accepted as an L-aspartate oxidase (NadB), that from
Pyrococcus horikoshii, not only clusters with other NadB
but is just one gene away from NadA [Biosynthesis of
cofactors, prosthetic groups, and carriers, Pyridine
nucleotides].
Length = 488
Score = 30.2 bits (68), Expect = 7.8
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 279 RAFLRPIRKRPNLKVAKRARVTKVLIDENDNLKRATGVEFFKNKQRHTVRARKEVILSAG 338
++ PN+++ + +LI+ R GV + N++ V+L+ G
Sbjct: 132 TTLVKKALNHPNIRIIEGENALDLLIET----GRVVGV-WVWNRETVETCHADAVVLATG 186
Query: 339 AL 340
Sbjct: 187 GA 188
>gnl|CDD|233368 TIGR01350, lipoamide_DH, dihydrolipoamide dehydrogenase. This
model describes dihydrolipoamide dehydrogenase, a
flavoprotein that acts in a number of ways. It is the E3
component of dehydrogenase complexes for pyruvate,
2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can
also serve as the L protein of the glycine cleavage
system. This family includes a few members known to have
distinct functions (ferric leghemoglobin reductase and
NADH:ferredoxin oxidoreductase) but that may be
predicted by homology to act as dihydrolipoamide
dehydrogenase as well. The motif GGXCXXXGCXP near the
N-terminus contains a redox-active disulfide.
Length = 460
Score = 29.9 bits (68), Expect = 8.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 657 EYDFIVIGAGSGGSVIANRL 676
YD IVIG G GG V A R
Sbjct: 1 AYDVIVIGGGPGGYVAAIRA 20
>gnl|CDD|235779 PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.
Length = 475
Score = 30.3 bits (69), Expect = 8.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 656 KEYDFIVIGAGSGGSVIANR 675
K++D +VIGAG GG V A R
Sbjct: 3 KQFDVVVIGAGPGGYVAAIR 22
>gnl|CDD|219205 pfam06862, DUF1253, Protein of unknown function (DUF1253). This
family represents the C-terminal portion (approximately
500 residues) of several hypothetical eukaryotic
proteins of unknown function.
Length = 436
Score = 29.9 bits (68), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 21 RIVDRIIKDNLLTPSDAVPDLKSFAEEYD 49
+VD +IK LL SD V + K F +E+
Sbjct: 51 EVVDTLIK--LLPASDQVENKKRFNDEFG 77
>gnl|CDD|179193 PRK00973, PRK00973, glucose-6-phosphate isomerase; Provisional.
Length = 446
Score = 30.0 bits (68), Expect = 9.1
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 25 RIIKDNLLTPSDAVPDLKSFAEEYDFIVVGSGSGGSVVANRLTEN----SNWTVLLLE-- 78
+ D L D+ +LK +++ +D +VV G GGS + N NW L E
Sbjct: 51 ELPYDRSL---DSYEELKEWSKNFDNVVV-LGIGGSALGNLALHYALNPLNWNELSKEER 106
Query: 79 AGPEEIILDEI-PLFVSHIVSS 99
GP +LD + P + I+
Sbjct: 107 NGPRVFVLDNVDPEKTASILDV 128
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.137 0.414
Gapped
Lambda K H
0.267 0.0825 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 62,012,998
Number of extensions: 6296084
Number of successful extensions: 5566
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5492
Number of HSP's successfully gapped: 109
Length of query: 1183
Length of database: 10,937,602
Length adjustment: 108
Effective length of query: 1075
Effective length of database: 6,147,370
Effective search space: 6608422750
Effective search space used: 6608422750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (28.6 bits)