BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8893
(820 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63615|VP33A_RAT Vacuolar protein sorting-associated protein 33A OS=Rattus
norvegicus GN=Vps33a PE=1 SV=1
Length = 597
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/554 (48%), Positives = 380/554 (68%), Gaps = 11/554 (1%)
Query: 1 MSTHLSGGKVNISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDV 60
M+ HLS G+VN++++++ R + E L+KC+G KAI+WD+ L GP GL+A LL E +V
Sbjct: 1 MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV 60
Query: 61 KRNIHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVP 120
++ LK GS P ++ N+IF+ RP ++ MD+IA+N+ +++R TR D+H+ FVP
Sbjct: 61 EKMFTLK-GSRLPAADVKNIIFLVRPRLELMDMIAENVL--SEDRRGPTR--DFHILFVP 115
Query: 121 RKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEV 180
R+SLLCEQRL++ GVLG+F E ++ +L PFD DL+SME E A++E +LE D T LY
Sbjct: 116 RRSLLCEQRLKDLGVLGSFIYREEYSLDLIPFDGDLLSMESESAFKECYLEGDQTSLYHA 175
Query: 181 AQAIITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRN 240
A+ ++TLQ LYG IP++ GKG C +QV ++ R+ E + L+L+DRN
Sbjct: 176 AKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPV--FDNLLLLDRN 233
Query: 241 VDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEK-IVSDKKSIILNSG 299
VD+LTPLA+QLTYEGLIDEI+GI N+ K P KF+ ++ K + ++ K + LNS
Sbjct: 234 VDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSA 293
Query: 300 DELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLL 359
+EL+A +RDK F VG LSK+AK ISA F+ + ++ K+V E+K V QLPHM + L
Sbjct: 294 EELYAEIRDKNFNAVGSVLSKKAKIISAAFE-ERHNAKTVGEIKQFVSQLPHMQAARGSL 352
Query: 360 ANHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLIC 419
ANHT+IAELIKDVT + +F D L EQE G+DTDK YIE+ IA K PL+KVL+L+C
Sbjct: 353 ANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKVLRLVC 412
Query: 420 MQSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKMM 479
+QS +SGLK KVL+YYKREI+QTYG++HILTL+NLE+AGLLK +Q G Y +RK +
Sbjct: 413 LQSMCNSGLKQKVLDYYKREILQTYGYEHILTLNNLEKAGLLK-AQTGGRNNYPTIRKTL 471
Query: 480 RLTVEDSSELAPADINFVHSIYAPLSIRLVQRLTREPSIIPQDLLALLPGAVLEETQT-T 538
RL ++D +E P DI++V+S YAPLS+RL Q L+R +++L +LPG EE Q
Sbjct: 472 RLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLP 531
Query: 539 TSSRRNRNTQENKM 552
T ++ R EN++
Sbjct: 532 TGVQKKRQPGENRV 545
>sp|Q96AX1|VP33A_HUMAN Vacuolar protein sorting-associated protein 33A OS=Homo sapiens
GN=VPS33A PE=1 SV=1
Length = 596
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/583 (46%), Positives = 387/583 (66%), Gaps = 15/583 (2%)
Query: 1 MSTHLSGGKVNISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDV 60
M+ HLS G+VN++++++ R + E L+KC+G KAI+WD+ L GP GL+A LL E +V
Sbjct: 1 MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV 60
Query: 61 KRNIHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVP 120
++ LK G+ P ++ N+IF RP ++ MDIIA+N+ +++R TR D+H+ FVP
Sbjct: 61 EKMFTLK-GNRLPAADVKNIIFFVRPRLELMDIIAENVL--SEDRRGPTR--DFHILFVP 115
Query: 121 RKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEV 180
R+SLLCEQRL++ GVLG+F E ++ +L PFD DL+SME E A++E +LE D T LY
Sbjct: 116 RRSLLCEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHA 175
Query: 181 AQAIITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRN 240
A+ ++TLQ LYG IP++ GKG C +QV ++ R+ E + L+L+DRN
Sbjct: 176 AKGLMTLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSIFPV--FDNLLLLDRN 233
Query: 241 VDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGD 300
VD+LTPLATQLTYEGLIDEI+GI N+ K P KF+ ++ + + ++ K + LNS +
Sbjct: 234 VDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAE 293
Query: 301 ELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLA 360
EL+A +RDK F VG LSK+AK ISA F+ + ++ K+V E+K V QLPHM + LA
Sbjct: 294 ELYAEIRDKNFNAVGSVLSKKAKIISAAFE-ERHNAKTVGEIKQFVSQLPHMQAARGSLA 352
Query: 361 NHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICM 420
NHT+IAELIKDVT + +F D L EQE G+DTDK YIE+ IA K L+KVL+L+C+
Sbjct: 353 NHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHSLIKVLRLVCL 412
Query: 421 QSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKMMR 480
QS +SGLK KVL+YYKREI+QTYG++HILTL NLE+AGLLK Q G Y +RK +R
Sbjct: 413 QSVCNSGLKQKVLDYYKREILQTYGYEHILTLHNLEKAGLLK-PQTGGRNNYPTIRKTLR 471
Query: 481 LTVEDSSELAPADINFVHSIYAPLSIRLVQRLTREPSIIPQDLLALLPGAVLEETQT-TT 539
L ++D +E P DI++V+S YAPLS+RL Q L+R +++L +LPG EE Q T
Sbjct: 472 LWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPT 531
Query: 540 SSRRNRNTQENKMLTFQEASLYTIKGIAILDNDGHRLLAKYYD 582
++ R EN++ ++ + G+ + R L++ D
Sbjct: 532 GLQKKRQPGENRV-----TLIFFLGGVTFAEIAALRFLSQLED 569
>sp|Q9D2N9|VP33A_MOUSE Vacuolar protein sorting-associated protein 33A OS=Mus musculus
GN=Vps33a PE=1 SV=2
Length = 598
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/555 (48%), Positives = 380/555 (68%), Gaps = 12/555 (2%)
Query: 1 MSTHLSGGKVNISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDV 60
M+ HLS G+VN++++++ R + E L+KC+G KAI+WD+ L GP GL+A LL E +V
Sbjct: 1 MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV 60
Query: 61 KRNIHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVP 120
++ LK GS P ++ N+IF+ RP ++ MDIIA+N+ +++R TR D+H+ FVP
Sbjct: 61 EKMFTLK-GSRLPAADVKNIIFLVRPRLELMDIIAENVL--SEDRRGPTR--DFHILFVP 115
Query: 121 RKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEV 180
R+SLLCEQRL++ GVLG+F E ++ +L PFD DL+SME E A++E +LE D T LY
Sbjct: 116 RRSLLCEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHA 175
Query: 181 AQAIITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRN 240
A+ ++TLQ LYG IP++ GKG C +QV ++ R+ E + L+L+DRN
Sbjct: 176 AKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPV--FDNLLLLDRN 233
Query: 241 VDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFS--QSEEDSNFEKIVSDKKSIILNS 298
VD+LTPLA+QLTYEGLIDEI+GI N+ K P KF+ + S + + ++ K + LNS
Sbjct: 234 VDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGSGGKDLPTEAKKLQLNS 293
Query: 299 GDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKL 358
+EL+A +RDK F VG LSK+AK ISA F+ + ++ K+V E+K V QLPHM +
Sbjct: 294 AEELYAEIRDKNFNAVGSVLSKKAKIISAAFE-ERHNAKTVGEIKQFVSQLPHMQAARGS 352
Query: 359 LANHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLI 418
LANHT+IAELIKDVT + +F D L EQE G+DTDK YIE+ IA K PL+KVL+L+
Sbjct: 353 LANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNSYIEDCIAQKHPLIKVLRLV 412
Query: 419 CMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKM 478
C+QS +SGLK KVL+YY+REI+QTYG++HILTL+NLE+AGLLK +Q G Y +RK
Sbjct: 413 CLQSVCNSGLKQKVLDYYRREILQTYGYEHILTLNNLEKAGLLK-AQTGGRNNYPTIRKT 471
Query: 479 MRLTVEDSSELAPADINFVHSIYAPLSIRLVQRLTREPSIIPQDLLALLPGAVLEETQT- 537
+RL ++D +E P DI++V+S YAPLS+RL Q L+R +++L +LPG EE Q
Sbjct: 472 LRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPL 531
Query: 538 TTSSRRNRNTQENKM 552
T ++ R EN++
Sbjct: 532 PTGLQKKRQPGENRV 546
>sp|Q9Y1I2|VP33A_DROME Vacuolar protein sorting-associated protein 33A OS=Drosophila
melanogaster GN=car PE=1 SV=1
Length = 617
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/626 (37%), Positives = 346/626 (55%), Gaps = 42/626 (6%)
Query: 1 MSTHLSGG--KVNISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNER 58
M HL G +VN+ L+Q+ A + L+ L++ G K I+ D+ + GP+ LV +L +R
Sbjct: 1 MFPHLKGHGQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADR 60
Query: 59 DVKRNIHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFF 118
+ R + LKP P E +ANV+++ RP V M+ +A ++K R+ R YH+ F
Sbjct: 61 GI-RLLALKPELHLPRE-VANVVYVMRPRVALMEQLAAHVK---AGGRAAAGR-QYHILF 114
Query: 119 VPRKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLY 178
PR+S LC +L+ +GVLG+F IE N P D DLVSMEM A+R+ ++ D + LY
Sbjct: 115 APRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFRDVSVDGDTSSLY 174
Query: 179 EVAQAIITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILID 238
+ A ++ LQ LYG IP++ GKG +VW+ K+L + + + + QLIL+D
Sbjct: 175 QAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRD--ERTLYNGDKGVVDQLILLD 232
Query: 239 RNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSE------------EDSNFEK 286
R++D+L+PLATQLTYEGLIDE +GI P F E+S
Sbjct: 233 RSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSGPRVEESQSLL 292
Query: 287 IVSDKKSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV 346
++KK+I+L+SG++L+A LR+K F V L+++A+ I Q + +KSV E+K+ V
Sbjct: 293 GDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKAREIHVQMHATS-QDKSVQEIKSFV 351
Query: 347 QQL-PHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAI 405
+ L P ++ KK + HT IA L+ + + F D L AEQE + D DK YIE+ I
Sbjct: 352 ENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADDLAAEQEFMVCADIDKPSAYIEDLI 411
Query: 406 AHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQ 465
A + L +VL+LICMQ +SG K K+L +YKRE++ YG + +LT+SNLE++GLL
Sbjct: 412 ACRVELNRVLRLICMQCHAASGFKEKLLNHYKRELVHVYGLEVLLTISNLEKSGLLHLQT 471
Query: 466 NSGTRQYTLLRKMMRLTVEDSSELAPADINFVHSIYAPLSIRLVQRLTREPSIIPQDLLA 525
S R Y++LRK + LTV+D+ E+ P DI++VHS YAPL+ R+V E S+ P
Sbjct: 472 ES--RAYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPLTARIV-----EHSLKPLGWQT 524
Query: 526 L------LPGAVLEETQTTTSSRRNRNT----QENKMLTFQEASLYT-IKGIAILDNDGH 574
L LPG E+ Q R+T E +L L + G +
Sbjct: 525 LKSQINNLPGPTFEDFQAQLVGIGGRHTVTTVSEGSLLNVPRVVLVCFVGGCTFAEIAAL 584
Query: 575 RLLAKYYDPNILSTVKDQKAFEKNLF 600
R LA D N+ + K K+ F
Sbjct: 585 RFLAAQEDNNVEFLIATTKVVNKHSF 610
>sp|Q94KJ7|VPS33_ARATH Vacuolar protein sorting-associated protein 33 homolog
OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1
Length = 592
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 168/529 (31%), Positives = 284/529 (53%), Gaps = 24/529 (4%)
Query: 5 LSGGKVNISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNI 64
L +N+ ++D + + + LL+ G K ++ D L+G V L+ L E ++
Sbjct: 7 LENAPLNLKSIRDKSERELVNLLKDVRGTKCLVIDPKLSGSVSLIIPTSKLKELGLELR- 65
Query: 65 HLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSL 124
HL + P V+++ R + M IA +I+ + + DY+++FVPR+S+
Sbjct: 66 HLT--AEPVQTECTKVVYLVRSQLSFMKFIASHIQND----IAKAIQRDYYVYFVPRRSV 119
Query: 125 LCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAI 184
CE+ L++ V N ++ F + P D D++S E+EL+ ++ ++ D + L+ +A+AI
Sbjct: 120 ACEKILEQEKV-HNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAI 178
Query: 185 ITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVL 244
L+ +G+I ++ KG +V D+ R+ +E + N N ++ LIL+DR VD++
Sbjct: 179 HELEFSFGVISKMRAKGKASVRVADILNRMQVE-EPVNSNDVGRPEVDTLILLDREVDMV 237
Query: 245 TPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFA 304
TP+ +QLTYEGLIDEI I N + + +E K + LNS D+LF
Sbjct: 238 TPMCSQLTYEGLIDEILHISNGAVEVDSSVMGAQQE--------GKKMKVPLNSSDKLFK 289
Query: 305 ALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTN 364
RD F V L ++A + + T+ ++VSE+K V++L N+ + H +
Sbjct: 290 ETRDLNFEVVVQVLRQKAMTMKEDY-TEINSTQTVSELKDFVKKL----NSLPEMTRHIH 344
Query: 365 IAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFT 424
+A+ + T F L EQ + + D YIE I ++PL VL+L+ + S T
Sbjct: 345 LAQHLTTFTSKQSFNSQLDMEQTLVEAENYDICYEYIEEMIHKQEPLTNVLRLLVLFSVT 404
Query: 425 SSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKMMRLTVE 484
+SGL K +Y + E++ +YGF+H++TL+NLE+AGLLK + + +++ ++L VE
Sbjct: 405 NSGLPKKQFDYIRMELLHSYGFEHVVTLNNLEKAGLLKKQEFKS--NWLTVKRTLKLIVE 462
Query: 485 DSSELAPADINFVHSIYAPLSIRLVQRLTREPSIIPQDLLALLPGAVLE 533
D+ P DI +V+S YAPLSIRL+Q+ +D+L LLPG LE
Sbjct: 463 DTDTSRPNDIAYVYSGYAPLSIRLIQQAIHSGWRPMEDILKLLPGPHLE 511
>sp|P35604|COPZ1_BOVIN Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=1 SV=2
Length = 177
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 557 EASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIMLEGL 616
E SLYT+K I ILDNDG RL AKYYD + +VK+QKAFEKN+FNKTHR ++EI +LEGL
Sbjct: 7 EPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGL 65
Query: 617 TCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLAL 676
T VYKS++DL+FYV+GSS+ENEL+LM+VLNCL+D++SQ+LRKNVEKR +L+N++ + LA+
Sbjct: 66 TVVYKSSIDLYFYVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAV 125
Query: 677 DEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
DEI DGG+I E+D VV RVALR +D+PL EQTV+QV QS Q +
Sbjct: 126 DEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIK 172
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D VV RVALR +D+PL EQTV+QV QSAKEQ+KWSLL+
Sbjct: 133 VILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>sp|Q5R5F2|COPZ1_PONAB Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 PE=2 SV=1
Length = 177
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 557 EASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIMLEGL 616
E SLYT+K I ILDNDG RL AKYYD + +VK+QKAFEKN+FNKTHR ++EI +LEGL
Sbjct: 7 EPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGL 65
Query: 617 TCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLAL 676
T VYKS++DL+FYV+GSS+ENEL+LM+VLNCL+D++SQ+LRKNVEKR +L+N++ + LA+
Sbjct: 66 TVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAV 125
Query: 677 DEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
DEI DGG+I E+D VV RVALR +D+PL EQTV+QV QS Q +
Sbjct: 126 DEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIK 172
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D VV RVALR +D+PL EQTV+QV QSAKEQ+KWSLL+
Sbjct: 133 VILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>sp|P61924|COPZ1_MOUSE Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 PE=2 SV=1
Length = 177
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 557 EASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIMLEGL 616
E SLYT+K I ILDNDG RL AKYYD + +VK+QKAFEKN+FNKTHR ++EI +LEGL
Sbjct: 7 EPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGL 65
Query: 617 TCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLAL 676
T VYKS++DL+FYV+GSS+ENEL+LM+VLNCL+D++SQ+LRKNVEKR +L+N++ + LA+
Sbjct: 66 TVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAV 125
Query: 677 DEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
DEI DGG+I E+D VV RVALR +D+PL EQTV+QV QS Q +
Sbjct: 126 DEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIK 172
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D VV RVALR +D+PL EQTV+QV QSAKEQ+KWSLL+
Sbjct: 133 VILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>sp|P61923|COPZ1_HUMAN Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 PE=1 SV=1
Length = 177
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 557 EASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIMLEGL 616
E SLYT+K I ILDNDG RL AKYYD + +VK+QKAFEKN+FNKTHR ++EI +LEGL
Sbjct: 7 EPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGL 65
Query: 617 TCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLAL 676
T VYKS++DL+FYV+GSS+ENEL+LM+VLNCL+D++SQ+LRKNVEKR +L+N++ + LA+
Sbjct: 66 TVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAV 125
Query: 677 DEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
DEI DGG+I E+D VV RVALR +D+PL EQTV+QV QS Q +
Sbjct: 126 DEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIK 172
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D VV RVALR +D+PL EQTV+QV QSAKEQ+KWSLL+
Sbjct: 133 VILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>sp|Q9H267|VP33B_HUMAN Vacuolar protein sorting-associated protein 33B OS=Homo sapiens
GN=VPS33B PE=1 SV=2
Length = 617
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 244/452 (53%), Gaps = 23/452 (5%)
Query: 11 NISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNIHLKPGS 70
+ S+++ AR Q + LLE+ GKK + + L P+ +ANV +L + +V + ++ +
Sbjct: 14 DFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVE--N 71
Query: 71 LPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQRL 130
P + + + F+ RP +K+M IA + + R TR+ Y + F P+K CE L
Sbjct: 72 KPALSSNEQLCFLVRPRIKNMRYIASLVNADKLAGR--TRK--YKVIFSPQKFYACEMVL 127
Query: 131 QENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQNL 190
+E G+ G+ + E + +L P D DL+SME+ +R+Y LE D + VAQA+ L L
Sbjct: 128 EEEGIYGDVSCDE-WAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTL 186
Query: 191 YGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVLTPLATQ 250
YG P G G C + ++L + +LE + + + +I + L+DR+VD +T L +Q
Sbjct: 187 YGPFPNCYGIGRCAKMAYELWR--NLEEEEDGETKGRRPEIGHIFLLDRDVDFVTALCSQ 244
Query: 251 LTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAALRDKI 310
+ YEGL+D+ F I + F G + + S++ ++LN+ D++F +R++
Sbjct: 245 VVYEGLVDDTFRIKCGSVDF-GPEVTSSDKSLK----------VLLNAEDKVFNEIRNEH 293
Query: 311 FTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV-QQLPHMINTKKLLANHTNIAELI 369
F+ V +LS++A+ + AQ+D + + + +MK V Q+L + +LL+ H E I
Sbjct: 294 FSNVFGFLSQKARNLQAQYDRRRGMD--IKQMKNFVSQELKGLKQEHRLLSLHIGACESI 351
Query: 370 KDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTSSGLK 429
+F + + E + G + ++ YIE I + ++ L+L+C+ S T +GL
Sbjct: 352 MKKKTKQDFQELIKTEHALLEGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLI 411
Query: 430 PKVLEYYKREIIQTYGFQHILTLSNLEQAGLL 461
PK K + +Q+YG +H+LT SNL +AGLL
Sbjct: 412 PKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLL 443
>sp|Q2HJ18|VP33B_BOVIN Vacuolar protein sorting-associated protein 33B OS=Bos taurus
GN=VPS33B PE=2 SV=1
Length = 617
Score = 219 bits (557), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 243/452 (53%), Gaps = 23/452 (5%)
Query: 11 NISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNIHLKPGS 70
+ S+++ AR Q + LLE+ GKK + + L P+ +ANV +L + +V + ++ +
Sbjct: 14 DFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVE--N 71
Query: 71 LPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQRL 130
P + + + F+ RP +K+M IA + + R TR+ Y + F P+K CE L
Sbjct: 72 KPALSSSEQLCFLVRPRIKNMRYIASLVNADKMAGR--TRK--YKVIFSPQKFYACEMVL 127
Query: 131 QENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQNL 190
+E GV G+ + E + +L P D DL+SME+ +R+Y LE D + +AQA+ L L
Sbjct: 128 EEEGVYGDVSCDE-WAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTLAQALHLLSTL 186
Query: 191 YGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVLTPLATQ 250
YG P G G C + ++L KRL E + + + +I + L+DR+VD +T L +Q
Sbjct: 187 YGPFPNCYGIGRCAKMSYELWKRL--EEEEDGETKGRRPEIGHIFLLDRDVDFVTALCSQ 244
Query: 251 LTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAALRDKI 310
+ YEGL+D+ F I + F G + + S++ ++LN+ D++F +R++
Sbjct: 245 VVYEGLVDDTFRIKCGSVDF-GPEVTSSDKSLK----------VLLNAEDKVFNEIRNEH 293
Query: 311 FTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV-QQLPHMINTKKLLANHTNIAELI 369
F+ V +LS++A+ + AQ+D + + + +MK V Q+L + +LL+ H E I
Sbjct: 294 FSNVFGFLSQKARNLQAQYDRRRGMD--IKQMKNFVSQELKGLKQEHRLLSLHIGACESI 351
Query: 370 KDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTSSGLK 429
+F + + E + G + ++ YIE I + ++ L+L+C+ S T +GL
Sbjct: 352 MKKKTKQDFQELIKTEHALLEGFNIRESTNYIEEHIDRQVSPIESLRLMCLLSITENGLI 411
Query: 430 PKVLEYYKREIIQTYGFQHILTLSNLEQAGLL 461
PK K + +Q+YG +H+LT NL +AGLL
Sbjct: 412 PKDYRSLKTQYLQSYGPEHLLTFFNLRRAGLL 443
>sp|P59016|VP33B_MOUSE Vacuolar protein sorting-associated protein 33B OS=Mus musculus
GN=Vps33b PE=1 SV=1
Length = 617
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 242/452 (53%), Gaps = 23/452 (5%)
Query: 11 NISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNIHLKPGS 70
+ S+++ AR Q + LLE+ GKK + + L P+ +ANV +L + +V + K +
Sbjct: 14 DFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDK--LYKVEN 71
Query: 71 LPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQRL 130
P + + F+ RP +K+M IA + + R R+ Y + P+K CE L
Sbjct: 72 KPALSANEQLCFLVRPRIKNMRYIASLVNADKLAGR--IRK--YKVILSPQKFYACEMVL 127
Query: 131 QENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQNL 190
+E GV G+ + E + +L P D DL+SME+ +R+Y LE D + VAQA+ L L
Sbjct: 128 EEEGVYGDVSCDE-WAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTL 186
Query: 191 YGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVLTPLATQ 250
YG P G G C + +DL ++L E + + + + +I + L+DR+VD +T L +Q
Sbjct: 187 YGPFPNCYGIGRCAKMSYDLWRKL--EEEEDSETKGRKPEIGHIFLLDRDVDFVTALCSQ 244
Query: 251 LTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAALRDKI 310
+ YEGL+D+ F I + F G + + S++ ++LN+ D++F+ +R++
Sbjct: 245 VVYEGLVDDTFRIKCGSVDF-GPEVTSSDKSLK----------VLLNAEDKVFSEIRNEH 293
Query: 311 FTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV-QQLPHMINTKKLLANHTNIAELI 369
F+ V +LS++A+ + AQ+D + + + +MK V Q+L + +LL+ H E I
Sbjct: 294 FSNVFGFLSQKARNLQAQYDRRRGMD--IKQMKNFVSQELKGLKQEHRLLSLHIGACESI 351
Query: 370 KDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTSSGLK 429
+F + + E + G + ++ YIE I + ++ L+L+C+ S T +GL
Sbjct: 352 MKKKTKQDFQELIKTEHALLEGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLI 411
Query: 430 PKVLEYYKREIIQTYGFQHILTLSNLEQAGLL 461
PK K + +Q+YG +H+LT SNL +AGLL
Sbjct: 412 PKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLL 443
>sp|Q63616|VP33B_RAT Vacuolar protein sorting-associated protein 33B OS=Rattus
norvegicus GN=Vps33b PE=2 SV=1
Length = 617
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 271/530 (51%), Gaps = 37/530 (6%)
Query: 11 NISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNIHLKPGS 70
+ S+++ AR Q + LLE+ GKK + + L P+ +ANV +L + +V + ++
Sbjct: 14 DFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDK-LYKVENK 72
Query: 71 LPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQRL 130
L N + F+ RP +K M IA+ + + R R+ Y + P+K CE L
Sbjct: 73 LTLSSN-EQLCFLVRPRIKTMRYIANLVNADKLAGR--VRK--YKIILSPQKFYACEMVL 127
Query: 131 QENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQNL 190
+E GV G+ + E + +L P D DL+SME+ +R+Y LE D + VAQA+ L L
Sbjct: 128 EEEGVYGDVSCDE-WAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTL 186
Query: 191 YGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVLTPLATQ 250
YG P G G C + +DL ++L E + + + + +I + L+DR+VD +T L +Q
Sbjct: 187 YGPFPNCYGIGRCTKMSYDLWRKL--EEEEDSETKGRRPEIGHIFLLDRDVDFVTALCSQ 244
Query: 251 LTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAALRDKI 310
+ YEGL+D+ F I + F G + + S++ ++LN+ D++F+ +R++
Sbjct: 245 VVYEGLVDDTFRIKCGSVDF-GPEVTSSDKSLK----------VLLNAEDKVFSEIRNEH 293
Query: 311 FTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV-QQLPHMINTKKLLANHTNIAELI 369
F+ V +LS++A+ + AQ+D + + + +MK V Q+L + +LL+ H E I
Sbjct: 294 FSNVFGFLSQKARNLQAQYDRRRGMD--IKQMKNFVSQELKGLKQEHRLLSLHIGACESI 351
Query: 370 KDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTSSGLK 429
+F + + E + G + ++ YIE I + ++ L+L+C+ S T +GL
Sbjct: 352 MKKKTKQDFQELIKTEHALLEGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLI 411
Query: 430 PKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKMMRLTVEDSSEL 489
PK K + +Q+YG +H+LT SNL +AGLL Q SG + K+ +L +
Sbjct: 412 PKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLL-TEQASGDTLTAVENKVSKLVTDK---- 466
Query: 490 APADINFVHSIYAPLS--------IRLVQRLTREPSI-IPQDLLALLPGA 530
A I S A S + L+ R+ E + +P+D+ + GA
Sbjct: 467 AAGKITDAFSSLAKRSNFRAISKKLNLIPRVDGEYDLKVPRDMAYVFSGA 516
>sp|Q58EN8|VP33B_DANRE Vacuolar protein sorting-associated protein 33B OS=Danio rerio
GN=vps33b PE=2 SV=1
Length = 617
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 286/594 (48%), Gaps = 70/594 (11%)
Query: 11 NISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKR--NIHLKP 68
+ SL++ AR Q + LLE+ GKK + D L P+ +ANV +L + +V + + LKP
Sbjct: 14 DFSLLKRLARDQLIFLLEQLPGKKDLFIDADLMSPLDRIANVTILKQHEVDKLYKVELKP 73
Query: 69 GSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQ 128
+ + + F+ RP ++ + I+D + + R RR Y + F P+K CE
Sbjct: 74 ----IVSSSDQLCFLIRPRIQTVKWISDLVNSDKVAGR--FRR--YKIIFTPQKFYACET 125
Query: 129 RLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQ 188
L+E GV G+ E + + P D+D++S+E+ +R+ LE D + A+ LQ
Sbjct: 126 VLEEQGVYGDVTTDE-WNFYILPLDDDILSLELPEFFRDNFLEGDQRWVTTGGGALHLLQ 184
Query: 189 NLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILIDRNVDVLTPLA 248
++YG +V G G C + V++ + L E + + + + +++ LIDR+VD +TPL
Sbjct: 185 SVYGSFSKVYGIGRCAKMVYESWRELMEEGEQRT----RQPEFAKVFLIDRDVDFVTPLC 240
Query: 249 TQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSI--ILNSGDELFAAL 306
+Q+ YEGL+D+IF I ++ +F + S KSI +LNS D++F +
Sbjct: 241 SQVVYEGLVDDIFRIKCSSVEFG-------------PDVTSSDKSIKVMLNSQDKVFNEI 287
Query: 307 RDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLV-QQLPHMINTKKLLANHTNI 365
R++ F+ V +LS++AK + +D + + + +MK V +L + +LL+ H
Sbjct: 288 RNEHFSNVFGFLSQKAKNLQTAYDKRRGMD--IQQMKAFVADELKGLKQEHRLLSLHIGA 345
Query: 366 AELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTS 425
+E I +F + L E + G + + + YIE I + ++ L+L+C+ S T
Sbjct: 346 SESIMKKKTKQDFQELLKTEHSLLEGFEIRECIAYIEEHINRQVSMIDSLRLLCLLSITE 405
Query: 426 SGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSGT---------------- 469
+GL K K + +Q+YG +H+LT +NL Q GLL+ Q T
Sbjct: 406 NGLLSKDYRSLKAQYLQSYGIEHLLTFANLRQLGLLEEQQTGETLTVMESKVGKLVNDKT 465
Query: 470 --------------RQYTLLRKMMRLTVEDSSEL---APADINFVHS-IYAPLSIRLVQR 511
+ L K + L + E P D+ ++ S Y PLS +L+++
Sbjct: 466 AGKLTDAFSSLAKKSNFRALSKRLALVPKSGEEYDLRVPRDMAYIFSGAYIPLSCKLIEQ 525
Query: 512 -LTREPSIIPQDLLALLPGAVLEETQTTTSS--RRNRNTQENKMLTFQEASLYT 562
L R+ +++ +L G T ++SS R N Q ++ F Y+
Sbjct: 526 VLERDGWTGLEEVTRMLNGQDFAVTGGSSSSEARNKSNGQRIILVMFLGGCTYS 579
>sp|O17901|COPZ_CAEEL Probable coatomer subunit zeta OS=Caenorhabditis elegans
GN=F59E10.3 PE=3 SV=1
Length = 184
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 559 SLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHR-ANAEIIMLEGLT 617
SLY+IKGI ILD DG+R+LAKYYD TVK+QKAFEK+LF+KT R +A+I++L+G+T
Sbjct: 10 SLYSIKGIVILDQDGNRVLAKYYDRTTFGTVKEQKAFEKSLFSKTSRNTSADILLLDGVT 69
Query: 618 CVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALD 677
C+Y+SNVDL+FYV+GS+ ENEL L + L CLYDA+S +LRKNVEK+ ++D++D +ML +D
Sbjct: 70 CLYRSNVDLYFYVLGSTRENELFLDATLTCLYDAVSVVLRKNVEKKALIDSMDTIMLIID 129
Query: 678 EICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQV 714
EICD GII E D+ AVVQR AL+ D++ +Q+V+Q+
Sbjct: 130 EICDEGIIMETDAQAVVQRTALKSDEVSFSDQSVSQI 166
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQV----FQSAKEQLKWSLLK 820
II E D+ AVVQR AL+ D++ +Q+V+Q+ +SA EQ KWSLLK
Sbjct: 136 IIMETDAQAVVQRTALKSDEVSFSDQSVSQIGFSFMKSANEQFKWSLLK 184
>sp|Q9JHH9|COPZ2_MOUSE Coatomer subunit zeta-2 OS=Mus musculus GN=Copz2 PE=2 SV=1
Length = 205
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 556 QEASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIMLEG 615
+E SLYTIK + ILDNDG RLLAKYYD + +VK+Q FEKN+FNKT R +EI L G
Sbjct: 34 REPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSVKEQMVFEKNVFNKTSRTESEIAFLGG 92
Query: 616 LTCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLA 675
+T VYKS++D+F YV+GSS ENEL+LMSVL CL+D++S ILRKNVEKR +L+N+D L
Sbjct: 93 MTIVYKSSIDIFLYVVGSSSENELMLMSVLACLFDSLSHILRKNVEKRWLLENMDGAFLV 152
Query: 676 LDEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
LDE DGG+I E+D V+Q+V R DD L EQ+VAQV QS Q +
Sbjct: 153 LDETVDGGVILESDPQQVIQKVNFRTDDSGLTEQSVAQVLQSAKEQIK 200
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D V+Q+V R DD L EQ+VAQV QSAKEQ+KWSLLK
Sbjct: 161 VILESDPQQVIQKVNFRTDDSGLTEQSVAQVLQSAKEQIKWSLLK 205
>sp|Q9P299|COPZ2_HUMAN Coatomer subunit zeta-2 OS=Homo sapiens GN=COPZ2 PE=2 SV=1
Length = 210
Score = 202 bits (514), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 553 LTFQEASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANAEIIM 612
L QE SLYTIK + ILDNDG RLLAKYYD + ++K+Q FEKN+FNKT R +EI
Sbjct: 36 LRLQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAF 94
Query: 613 LEGLTCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIV 672
G+T VYK+++DLF YV+GSS+ENEL+LMSVL CL+++++ +LRKNVEKR +L+N+D
Sbjct: 95 FGGMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGA 154
Query: 673 MLALDEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYLQTR 723
L LDEI DGG+I E+D V+Q+V R DD L EQ+VAQV QS Q +
Sbjct: 155 FLVLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIK 205
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 776 IIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSAKEQLKWSLLK 820
+I E+D V+Q+V R DD L EQ+VAQV QSAKEQ+KWSLLK
Sbjct: 166 VILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>sp|Q9P7V6|VPS33_SCHPO Vacuolar protein sorting-associated protein 33
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps33 PE=3 SV=1
Length = 592
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 260/508 (51%), Gaps = 38/508 (7%)
Query: 15 VQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRNIHLKPGSLPPM 74
V++ A + L+L++ +GKK+++ + L+G +G + L E H P
Sbjct: 5 VKEKATFKLLDLIDSVTGKKSLLLERDLSGILGQIVTTNTLQE-------HGIPQVYWFN 57
Query: 75 ENIAN-----VIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKSLLCEQR 129
ENI N I++ RP ++ ++A ++++ ++ D RI+ + +P ++L E
Sbjct: 58 ENIPNDIEKKTIYLCRPTYENAKLVATHVRQFQR----DMLRIESTVIVLPTSNILFETV 113
Query: 130 LQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEVAQAIITLQN 189
LQE GV G + E + + P D DL+S+E+ E L L A+I +
Sbjct: 114 LQEEGVFGELLVTE-WPLHAVPLDKDLLSLELGPEKLEESL------LQRSTDALIDFER 166
Query: 190 LYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQL----ILIDRNVDVLT 245
+G PRVSG+GP ++ +L ++ E N + + +IS L +L+DR++D +T
Sbjct: 167 THGRFPRVSGRGPYAAKMLELLEKTYQEEATINFGKVE-GEISALYDSVLLVDRSLDRIT 225
Query: 246 PLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAA 305
P TQLTY G +DEI GI K P + +++E SN + KK + +S ++
Sbjct: 226 PFLTQLTYFGFLDEILGIQQMNVKLPSSLVNRNEA-SNTGPM---KKFSLSSSSSQITKE 281
Query: 306 LRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTNI 365
+RD F +GPYLSK A+ +S+ F+ + K+V++++ V +L + + L HT +
Sbjct: 282 IRDINFNCIGPYLSKIARKLSSDFEGRR-QAKTVNQIRDFVSKLGSLQSEHTSLNIHTGL 340
Query: 366 AELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTS 425
AE + T F L + + D+ ++ I + P+ +V +++C+ S T+
Sbjct: 341 AETLVQHTKNNYFQKLLQLQHLLVSHADSFTQFNLLDEIIYAEAPVEEVFRVLCLASITT 400
Query: 426 SGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNSQNSG-----TRQYTLLRKMMR 480
+GL+ K +++Y+REI QTYG+ H+LT L AGLL+ Q++ + Y+
Sbjct: 401 NGLRRKDIDHYRREITQTYGYYHLLTFQALIDAGLLRLRQSTNISLQKSLSYSTWLNTYP 460
Query: 481 LTVEDSSELAPADINFVHSIYAPLSIRL 508
L ++ E P DI + +S Y PLS+ +
Sbjct: 461 LVKDEVDEQNPEDIAYTYSGYGPLSVHI 488
>sp|P34260|VP33A_CAEEL Vacuolar protein sorting-associated protein 33A OS=Caenorhabditis
elegans GN=vps-33.1 PE=1 SV=4
Length = 603
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 252/537 (46%), Gaps = 51/537 (9%)
Query: 8 GKVNISLVQDFARTQFLELLEKCSGKKAIIWDD--ALAGPVGLVANVQLLNERDVKRN-- 63
G I +++R +L+ G K I+WD ++ V L A +L V N
Sbjct: 18 GTSEIKSANEYSRNLLFSVLDSLDGNKTIVWDRDRSVMHRVNLFAGASVLAAHGVVANHS 77
Query: 64 IHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFFVPRKS 123
I K + P +V+F P + +D++ D I R+D++ I Y +FF+P
Sbjct: 78 IETKKSASTP-----HVVFFLAPTMVSLDLLCDYID----NVRNDSK-ILYQVFFIPEAW 127
Query: 124 LLCEQRLQ---ENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEV 180
+ + L+ E ++ P D + +S+ + D T L++
Sbjct: 128 FVVRESLKTRAEGKYWERLESVKEIPLCWLPRDGECLSLSSPQIAARLLINGDWTHLHKC 187
Query: 181 AQAIITLQNLYGIIPRVSGKGPC---VQQVW--DLTKRLS-------LEPKNKNVNQCKT 228
A A+ L ++ S + P + W D+ K + + KN++ +
Sbjct: 188 AVALNQLIDMCRGRSSSSNQRPMSIYAKGKWASDVAKMMGKIRNSAEADSMTKNLDPIEG 247
Query: 229 S-QISQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNT-TAKFPGAKFSQSEEDSNFEK 286
+I++++LIDR +D LTP+ +QLT+ GL+DEI+GI + K P +F ++ F++
Sbjct: 248 LLKINRIVLIDRWMDPLTPMLSQLTFYGLLDEIYGIGMVNSVKVPEMEFKNEKDGDPFQE 307
Query: 287 IVSDKKSIILNSGDELFAALRDKIFTGVGPYLSKRAKFI--SAQFDTQNYHEKSVSEMKT 344
K + L DE++ L+ V SK I QFD + SV+E
Sbjct: 308 -----KEVYLI--DEVYHRLKHSHINAVSIEASKVLAEIRDDEQFDRD---KMSVAEYSV 357
Query: 345 LVQQLPHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALPYIENA 404
LV+++P +IN KK++ H +AE+I+ + D++ E+++ D+DKA+P IE+
Sbjct: 358 LVKKMPKIINRKKMIEVHMRLAEMIQSHVYCKQS-DSIKLERDLLEYSDSDKAIPLIEDL 416
Query: 405 IAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLLKNS 464
I PL VL+LI + S T GLKP VL++Y+R + Q+YG + + +++ GL++
Sbjct: 417 IFDASPLNAVLRLISVHSLTCGGLKPSVLQHYRRIVNQSYGSSALNKVLKMQKMGLIREK 476
Query: 465 QNSGTRQ-------YTLLRKMMRLTVEDSSELAPADINFVHSIYAPLSIRLVQRLTR 514
G Q + ++K + E+ SE D+ + +S ++PL ++++ R
Sbjct: 477 GGGGKMQCEYAQMMFQQMKKNHDMLPEEFSEAKLDDMAYAYSGFSPLLCKMLEEGDR 533
>sp|Q940S5|COPZ1_ARATH Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2
SV=1
Length = 177
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 563 IKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANA----EIIMLEGLTC 618
+K I +LD++G R+ KYY + T Q+AFEK++F KT + NA E+ LE
Sbjct: 7 VKNILLLDSEGKRVAVKYYSDD-WPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIV 65
Query: 619 VYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALDE 678
VYK DL F+V G ENELIL SVL L+DA++ +LR NV+KR LDNLD++ L+ DE
Sbjct: 66 VYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDE 125
Query: 679 ICDGGIIQEADSSAVVQRVALRVDD--IPLGEQTVAQVFQSGYLQ-TRSL 725
I DGGI+ E D++ + + + D PL EQT++Q + TRSL
Sbjct: 126 IIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSL 175
>sp|Q9MAX5|COPZ1_ORYSJ Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1
PE=2 SV=1
Length = 177
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 7/163 (4%)
Query: 562 TIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANA----EIIMLEGLT 617
++K I +LD++G R+ KYY + T+ + AFEK++F KT +A A EI+M +G
Sbjct: 6 SVKNILLLDSEGKRVAVKYYTDD-WPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHI 64
Query: 618 CVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALD 677
VYK DL F+V G ENELIL SVL DA+ ILR NV+KR L+NLD+++L LD
Sbjct: 65 VVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLD 124
Query: 678 EICDGGIIQEADSSAVVQRVALRVDD--IPLGEQTVAQVFQSG 718
EI DGGI+ E + S + ++V+ + L EQT+ Q +
Sbjct: 125 EIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTA 167
>sp|Q6Z844|COPZ2_ORYSJ Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2
PE=2 SV=1
Length = 182
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 552 MLTFQEASLYTIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKT----HRAN 607
M F + S ++K I +LD++G R+ KY+ + S+ + AFEK++F KT R+
Sbjct: 1 MGEFSKESCPSVKNILLLDSEGKRVAVKYFSDD-WSSNASKLAFEKSVFTKTLKTNARSE 59
Query: 608 AEIIMLEGLTCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLD 667
AEI + +G VYK DL F+V ENELI+ +VL D++ +LR +VEKR L+
Sbjct: 60 AEITLFDGYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALE 119
Query: 668 NLDIVMLALDEICDGGIIQEADSSAVVQRVALRVDD--IPLGEQTVAQVFQSG 718
NLD+++L +DEI DGGII E D++ + +VA D P EQT++Q +
Sbjct: 120 NLDLILLCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATA 172
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 776 IIQEADSSAVVQRVALRVDD--IPLGEQTVAQVFQSAKEQLKWSLLK 820
II E D++ + +VA D P EQT++Q +A+E L SLLK
Sbjct: 136 IILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182
>sp|Q8H1F4|COPZ3_ARATH Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN=At4g08520 PE=2
SV=1
Length = 181
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 7/162 (4%)
Query: 563 IKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANA----EIIMLEGLTC 618
+K I +LD++G R+ KYY + +T + AFEK +F+KT + NA EI +LE
Sbjct: 11 VKNILLLDSEGKRVAVKYYSDD-WATNASKLAFEKYVFSKTSKTNARTEAEITLLESNIV 69
Query: 619 VYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALDE 678
VYK DL F+V G +ENEL+L SVL +DA++ +LR NVEK L+NLD++ L LDE
Sbjct: 70 VYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLDE 129
Query: 679 ICDGGIIQEADSSAVVQRVALRVDDI--PLGEQTVAQVFQSG 718
+ D G++ E D++ + +VA++ + L EQT+ Q +
Sbjct: 130 MVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATA 171
>sp|P53600|COPZ_YEAST Coatomer subunit zeta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RET3 PE=1 SV=1
Length = 189
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 13/171 (7%)
Query: 559 SLYTIKGIAILDNDGHRLLAKYYDPN---------ILSTVKDQKAFEKNLFNKTHRANAE 609
SLYT++ + ILD G R+ AKYY P + ++VK QK FEK L+ KTH+ ++E
Sbjct: 5 SLYTVQAVLILDQQGERIYAKYYQPPHRSDEGHQLLFNSVKKQKEFEKQLYRKTHKQDSE 64
Query: 610 IIMLEGLTCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNL 669
I++ E +YK +D+ Y++ S ENE++L + + A+ IL ++K+N+ +N
Sbjct: 65 ILIFEDHLVLYKEYIDITIYLVASLEENEIVLQQGFSAIRGALDLILNSGMDKKNIQENY 124
Query: 670 DIVMLALDEICDGGIIQEADSSAVVQRVALRVDDIPLGEQTVAQVFQSGYL 720
D+V+LA+DE D G+I E DS+ +A RV P E +A G+L
Sbjct: 125 DMVLLAIDETIDNGVILETDSNT----IASRVSKPPTNEPQMALDLDKGFL 171
>sp|Q5NA06|COPZ3_ORYSJ Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica
GN=Os01g0838800 PE=2 SV=1
Length = 177
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 562 TIKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTH----RANAEIIMLEGLT 617
++K I +LD++G R+ KYY + ++ ++AFEK++F KT R AEI+M +
Sbjct: 6 SVKNILVLDSEGKRVAVKYYSDD-WPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYF 64
Query: 618 CVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALD 677
VYK DL F+V G ENELIL SVL +AI +LR V +R L+NLD++ L LD
Sbjct: 65 VVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLD 124
Query: 678 EICDGGIIQEADSSAVVQRVA 698
E+ DGGI+ E D+ A++++V+
Sbjct: 125 EVVDGGIVLETDAKAILEKVS 145
>sp|Q84LG4|COPZ2_ARATH Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2
SV=1
Length = 179
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 7/162 (4%)
Query: 563 IKGIAILDNDGHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRANA----EIIMLEGLTC 618
+K I +LD++G R+ KYY + T + +FEK +F+KT + NA EI +L+
Sbjct: 9 VKNILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNII 67
Query: 619 VYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLDIVMLALDE 678
VYK DL F+V G +ENELIL SVL +DA++ +LR NVEK L+NLD++ L LDE
Sbjct: 68 VYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDE 127
Query: 679 ICDGGIIQEADSSAVVQRVALRVDDI--PLGEQTVAQVFQSG 718
+ D G++ E D + + +VA++ + L EQT+ Q +
Sbjct: 128 MVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATA 169
>sp|Q54HD4|COPZA_DICDI Probable coatomer subunit zeta-A OS=Dictyostelium discoideum
GN=copZa PE=3 SV=1
Length = 175
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 5/148 (3%)
Query: 560 LYTIKGIAILDND-GHRLLAKYYDPNILSTVKDQKAFEKNLFNKTHRAN--AEIIMLEGL 616
LYT+ ILD+ G R++AKYY+ N T++ QKAFEK +F+KT + N EI +L+
Sbjct: 5 LYTVTSFFILDSSKGERVIAKYYN-NDFDTLQKQKAFEKKVFDKTSKVNFGGEITLLDNY 63
Query: 617 TCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKN-VEKRNVLDNLDIVMLA 675
VYKS ++ Y++G ++NE+ L+ VLN D + + + + K+ +LD ++ +L
Sbjct: 64 LVVYKSFSNIIIYMVGDQNQNEIALLYVLNSFIDTLQNLFENSQINKKLILDGINYTLLT 123
Query: 676 LDEICDGGIIQEADSSAVVQRVALRVDD 703
LDEI DGGII E+DS+ + RV ++ D
Sbjct: 124 LDEIIDGGIIMESDSAVIADRVGIKAPD 151
>sp|P20795|VPS33_YEAST Vacuolar protein sorting-associated protein 33 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS33 PE=1
SV=1
Length = 691
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 46/305 (15%)
Query: 234 LILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKS 293
LI+++RN D +TPL TQLTY G++D+++ ++ G K + + + N+++
Sbjct: 276 LIILERNTDPITPLLTQLTYAGILDDLYEFNS------GIKIKEKDMNFNYKE------- 322
Query: 294 IILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMI 353
D+++ L+ F +GP L+K AK + Q+DT++ E SV E+K V L +
Sbjct: 323 ------DKIWNDLKFLNFGSIGPQLNKLAKELQTQYDTRHKAE-SVHEIKEFVDSLGSLQ 375
Query: 354 NTKKLLANHTNIAELIKDVTDTAE---FLDALHAEQEIFLG--VDTDKALPYIENAIAHK 408
+ L NHT ++ + V +T E F L E EI +G ++ D +E ++
Sbjct: 376 QRQAFLKNHTTLSSDVLKVVETEEYGSFNKILELELEILMGNTLNNDIEDIILELQYQYE 435
Query: 409 KPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTLSNLEQAGLL-----KN 463
K+L+LIC+ S + L+ K EY + +I ++G + L +L + G K
Sbjct: 436 VDQKKILRLICLLSLCKNSLREKDYEYLRTFMIDSWGIEKCFQLESLAELGFFTSKTGKT 495
Query: 464 SQNSGTRQYTLLRKMMRL------TVEDSSELAPADI----------NFVHSIYAPLSIR 507
+ T + T L+K R TV E A I F +S PL++R
Sbjct: 496 DLHITTSKSTRLQKEYRYISQWFNTVPIEDEHAADKITNENDDFSEATFAYSGVVPLTMR 555
Query: 508 LVQRL 512
LVQ L
Sbjct: 556 LVQML 560
>sp|O74891|COPZ_SCHPO Probable coatomer subunit zeta OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ret3 PE=3 SV=1
Length = 190
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 559 SLYTIKGIAILDNDGHRLLAKYYDP--------NILSTVKDQKAFEKNLFNKTHRANAEI 610
+LY + ILD+ G R+ KYY P + ++VK++K FEK LF KT + +I
Sbjct: 4 TLYAVNAFLILDSSGKRIFTKYYAPPHLKEGEGGVFNSVKEEKTFEKGLFEKTWKTQNDI 63
Query: 611 IMLEGLTCVYKSNVDLFFYVMGSSHENELILMSVLNCLYDAISQILRKNVEKRNVLDNLD 670
+ +G V + +D+ FY++G ENE++L L + DA+ + + +KR +L+N D
Sbjct: 64 LTYDGKLVVMLTVMDVIFYIVGGMEENEVMLYECLRSIRDALELLFKYVPDKRTLLENYD 123
Query: 671 IVMLALDEICDGGIIQEADSSAVVQRVA 698
+++ +DE D G+I E + + + RV
Sbjct: 124 QLVIVVDETIDDGVILETEPALIAARVT 151
>sp|Q54CA7|COPZB_DICDI Probable coatomer subunit zeta-B OS=Dictyostelium discoideum
GN=copZb PE=3 SV=1
Length = 178
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 557 EASLYTIKGIAILDNDGHRLLAKYYDP--NILSTVKDQKAFEKNLFNKTHRANAEIIMLE 614
+ ++Y IK I +LDN+G RL + +YDP ++ + ++ FEK +F K +N E+ +++
Sbjct: 2 DETVYQIKAIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCKTSNCELEIID 61
Query: 615 GLTCVYKSNVDLFFYVMGSS-HENELILMSVLNCLYDAISQILRKN----VEKRNVLDNL 669
+ D++ +V+G+S + NEL L+ VLN L + + + K+ L+N
Sbjct: 62 NKVVIGSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENY 121
Query: 670 DIVMLALDEICDGGIIQEADSSAVVQRVAL 699
++ L +DEI GII E D ++ RV +
Sbjct: 122 ALIRLYIDEIVSDGIIFEVDEETILNRVPI 151
>sp|Q09805|VPS45_SCHPO Vacuolar protein sorting-associated protein 45
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps45 PE=3 SV=1
Length = 558
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 23/292 (7%)
Query: 104 EKRSDTRRIDYHLFF---VPRKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSME 160
E+ D + +YHL+F +P+ L +RL E+ I+ F + +NDL S
Sbjct: 82 EELRDPKYAEYHLYFTNVIPKSFL---ERLAESDDFEAVKSIQEFFLDYLVVNNDLASFN 138
Query: 161 MELAYREYHLEKDPTCLYEVAQAIITLQNLYGIIPRVSGKGP---CVQQVWDLTKRLSLE 217
+ + + Q II+L P + C++ +++ + E
Sbjct: 139 IPHIIEDSPDNWQDGAFHRTHQGIISLLLSLKKKPVIRYDNNSLLCLKLAEEVSYTIQHE 198
Query: 218 PKNKNVNQCKTSQISQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQ 277
+ N + T+ I L+L+DR D +TPL TQ TY+ ++ E+FGI N F
Sbjct: 199 SQLFNFRKPDTAPI--LLLLDRKNDPITPLLTQWTYQAMVHELFGIDNGRVSF------- 249
Query: 278 SEEDSNFEKIVSDKKSIILNSG-DELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHE 336
S S+ EK I+LN D + R F +G + + + +
Sbjct: 250 SNSTSDNEK----STEIVLNPTLDPFYKETRFDNFGDLGVKIKDYVSHLQTKSTKKASEI 305
Query: 337 KSVSEMKTLVQQLPHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEI 388
+S+++MK ++ P ++ H ++ I V L+ EQ +
Sbjct: 306 ESIADMKQFLEAYPEYRRLSGNVSKHVSLVSEISQVVQRENLLEVGEVEQSL 357
>sp|P34815|UNC18_CAEEL Putative acetylcholine regulator unc-18 OS=Caenorhabditis elegans
GN=unc-18 PE=2 SV=3
Length = 673
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQLI+IDR D +TPL +LT + + ++ GI N K+ D N E
Sbjct: 308 SQLIIIDRGYDAITPLLHELTLQAMCYDLLGIENDV-----YKYETGGSDENLE------ 356
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKR-AKFISAQFDTQNYHEKSVSEMKTLVQQLP 350
K ++L+ D+L+ +R K V ++K KF ++ + KS+ ++ L++++P
Sbjct: 357 KEVLLDENDDLWVEMRHKHIAVVSQEVTKNLKKFSESKGNKGTMDSKSIKDLSMLIKRMP 416
Query: 351 HMINTKKLLANHTNIAELIKDVTDTAEFLDAL-HAEQEIFLGVDTD 395
+ H ++AE + + + +D L EQ++ G+D +
Sbjct: 417 QHKKELNKFSTHISLAE--ECMKQYQQGVDKLCKVEQDLSTGIDAE 460
>sp|P97390|VPS45_MOUSE Vacuolar protein sorting-associated protein 45 OS=Mus musculus
GN=Vps45 PE=1 SV=1
Length = 570
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 201 GPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILI-DRNVDVLTPLATQLTYEGLIDE 259
G CV+QV K + + + +++ L+LI DR D +TPL Q TY+ ++ E
Sbjct: 188 GECVKQVIS---------KEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHE 238
Query: 260 IFGIHNTT---AKFPGAKFSQSEEDSNFEKIVSDKKSIILNS-GDELFAALRDKIFTGVG 315
+ GI+N ++ PG I D + ++L++ DE +A F +G
Sbjct: 239 LLGINNNRIDLSRVPG--------------ISKDLREVVLSAENDEFYANNMYLNFAEIG 284
Query: 316 PYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTNIAELIKDVTDT 375
+ + + + +S+++MK V+ P ++ H + + +
Sbjct: 285 SNIKNLMEDFQKKRPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSE 344
Query: 376 AEFLDALHAEQEIFLGVDTDKALPYIENAIAHKK 409
L+ EQE+ D AL ++ + + K
Sbjct: 345 RNLLEVSEVEQELACQNDHSSALQNVKRLLQNPK 378
>sp|O08700|VPS45_RAT Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus
GN=Vps45 PE=2 SV=1
Length = 570
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 201 GPCVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILI-DRNVDVLTPLATQLTYEGLIDE 259
G CV+QV K + + + +++ L+LI DR D +TPL Q TY+ ++ E
Sbjct: 188 GECVKQVIS---------KEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHE 238
Query: 260 IFGIHNTT---AKFPGAKFSQSEEDSNFEKIVSDKKSIILNS-GDELFAALRDKIFTGVG 315
+ GI+N ++ PG I D + ++L++ DE +A F +G
Sbjct: 239 LLGINNNRIDLSRVPG--------------ISKDLREVVLSAENDEFYANNMYLNFAEIG 284
Query: 316 PYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTNIAELIKDVTDT 375
+ + + + +S+++MK V+ P ++ H + + +
Sbjct: 285 SNIKNLMEDFQKKRPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSE 344
Query: 376 AEFLDALHAEQEIFLGVDTDKALPYIENAIAHKK 409
L+ EQE+ D AL ++ + + K
Sbjct: 345 RNLLEVSEVEQELACQNDHSSALQNVKRLLQNPK 378
>sp|Q9NRW7|VPS45_HUMAN Vacuolar protein sorting-associated protein 45 OS=Homo sapiens
GN=VPS45 PE=1 SV=1
Length = 570
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 53/287 (18%)
Query: 203 CVQQVWDLTKRLSLEPKNKNVNQCKTSQISQLILI-DRNVDVLTPLATQLTYEGLIDEIF 261
CV+QV +TK L + + +++ L+LI DR D +TPL Q TY+ ++ E+
Sbjct: 190 CVKQV--ITKEYEL-------FEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL 240
Query: 262 GIHNTT---AKFPGAKFSQSEEDSNFEKIVSDKKSIILNS-GDELFAALRDKIFTGVGPY 317
GI+N ++ PG I D + ++L++ DE +A F +G
Sbjct: 241 GINNNRIDLSRVPG--------------ISKDLREVVLSAENDEFYANNMYLNFAEIGSN 286
Query: 318 LSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTNIAELIKDVTDTAE 377
+ + + + +S+++MK V+ P ++ H + + +
Sbjct: 287 IKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERN 346
Query: 378 FLDALHAEQEIFLGVDTDKALPYIENAIAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYK 437
L+ EQE+ D AL I+ + + PKV E+
Sbjct: 347 LLEVSEVEQELACQNDHSSALQNIKRLLQN----------------------PKVTEFDA 384
Query: 438 REIIQTYGFQHILTLSNLEQAGLLKNSQNSGTRQYTLLRKMMRLTVE 484
++ Y + SN GL+ + +N G + RK++ VE
Sbjct: 385 ARLVMLYALHYERHSSN-SLPGLMMDLRNKGVSEK--YRKLVSAVVE 428
>sp|Q28288|STXB2_CANFA Syntaxin-binding protein 2 OS=Canis familiaris GN=STXBP2 PE=2 SV=1
Length = 593
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 179 EVAQAIITLQNLYGIIPRVSGKGPCV-QQVWD--LTKRLSLEPKNKNVNQCKTSQISQLI 235
++A TLQ I R KGP V Q+ + L K + + N ++ + SQL+
Sbjct: 175 QIATLCATLQEYPAIRYR---KGPEVTAQLANAVLAKLNAFKADNPSLGEGPEKTRSQLL 231
Query: 236 LIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDKKSII 295
++DR D ++PL +LT++ + ++ I T ++ S++ E K+++
Sbjct: 232 IVDRGADPVSPLLHELTFQAMAYDLLNIEQDTYRYETTGLSEARE-----------KAVL 280
Query: 296 LNSGDELFAALRDKIFTGVGPYLSKRAK-FISAQFDTQNYHEKSVSEMKTLVQQLPHMIN 354
L+ D+L+ LR V +++ K F ++ T + + ++ ++ +++++P
Sbjct: 281 LDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTD--KANIKDLSHILKKMPQYQK 338
Query: 355 TKKLLANHTNIA-ELIKDVTDTAEFLDALHAEQEIFLGVDTDKA---------LPYIENA 404
+ H ++A + +K + E L + EQ++ +G DT+ +P + +A
Sbjct: 339 ELNKYSTHLHLADDCMKHFKGSVEKLCGV--EQDLAMGSDTEGEKIKDAMKLIVPVLLDA 396
Query: 405 IAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQ-HILTLSNLEQ-AGLLK 462
++VL L + L+ V E ++IQ Q H + NLEQ G +
Sbjct: 397 AVPAYDKIRVLLLYIL-------LRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGGTVT 449
Query: 463 NSQNSGT 469
N GT
Sbjct: 450 NPGGPGT 456
>sp|Q07327|ROP_DROME Protein ROP OS=Drosophila melanogaster GN=Rop PE=2 SV=2
Length = 597
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 45/267 (16%)
Query: 145 FTCNLFPFDN-DLVSMEMELAY---REYHLEKDPTCLYEVAQAIITLQNLYGIIPRVSGK 200
+ C +F D+ D A+ R H+E+ +A+ I TL G P V +
Sbjct: 151 YECQVFSLDSPDTFQCLYSPAFASIRSKHIER-------IAEQIATLCATLGEYPNVRYR 203
Query: 201 GPCVQQVWDLTKRLSLEPKNK---------NVNQCKTSQISQLILIDRNVDVLTPLATQL 251
WD L+ + K + + SQL+++DR D ++PL +L
Sbjct: 204 SD-----WDRNIDLAASVQQKLDAYKADDATMGEGPEKARSQLLILDRGFDCVSPLLHEL 258
Query: 252 TYEGLIDEIFGIHNTTAKF-PGAKFSQSEEDSNFEKIVSDKKSIILNSGDELFAALRDKI 310
T + + ++ I N ++ PG K ++L+ D+L+ LR +
Sbjct: 259 TLQAMAYDLLPIVNDVYRYTPGPN--------------QPDKEVLLDENDDLWVELRHEH 304
Query: 311 FTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPHMINTKKLLANHTNIAELIK 370
V +++ K + D++ S M+ L Q + M +K L+ ++ L +
Sbjct: 305 IAVVSTQVTQNLKKFT---DSKRMGSADKSSMRDLSQMIKKMPQYQKELSKYSTHLHLAE 361
Query: 371 DVTDTAE-FLDAL-HAEQEIFLGVDTD 395
D + + ++D L EQ++ +G D +
Sbjct: 362 DCMKSYQNYVDKLCRVEQDLAMGTDAE 388
>sp|Q64324|STXB2_MOUSE Syntaxin-binding protein 2 OS=Mus musculus GN=Stxbp2 PE=2 SV=1
Length = 593
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D ++PL +LT++ + ++ I T ++ S+S E
Sbjct: 228 SQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETTGLSESRE----------- 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAK-FISAQFDTQNYHEKSVSEMKTLVQQLP 350
K+++L+ D+L+ LR V +++ K F ++ T + + ++ ++ +++++P
Sbjct: 277 KAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTD--KANIKDLSHILKKMP 334
Query: 351 HMINTKKLLANHTNIA-ELIKDVTDTAEFLDALHAEQEIFLGVDTDKA---------LPY 400
+ H ++A + +K + E L ++ EQ++ +G D + +P
Sbjct: 335 QYQKELNKYSTHLHLADDCMKHFKGSVEKLCSV--EQDLAMGSDAEGEKIKDAMKLIVPV 392
Query: 401 IENAIAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTL-SNLEQ-A 458
+ +A ++VL L + L+ V E ++IQ Q +L NLEQ
Sbjct: 393 LLDASVPPYDKIRVLLLYIL-------LRNGVSEENLAKLIQHANVQSYSSLIRNLEQLG 445
Query: 459 GLLKNSQNSGTRQYTLLRKMMRLTVE 484
G + NS SGT R+ M T +
Sbjct: 446 GTVTNSAGSGTSSRLERRERMEPTYQ 471
>sp|P38932|VPS45_YEAST Vacuolar protein sorting-associated protein 45 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS45 PE=1
SV=2
Length = 577
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 47/304 (15%)
Query: 110 RRIDYHLFF--VPRKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEME----- 162
R +Y +FF + KS L +RL E+ L +E + F + DL S +++
Sbjct: 100 RYGEYQIFFSNIVSKSQL--ERLAESDDLEAVTKVEEIFQDFFILNQDLFSFDLQPREFL 157
Query: 163 ---LAYREYHLEKDPTCLYEVAQAIITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLE-P 218
L + E L K C + +++L+ I P + +G + L K +S E
Sbjct: 158 SNKLVWSEGGLTK---CTNSLVSVLLSLK----IKPDIRYEGAS-KICERLAKEVSYEIG 209
Query: 219 KNKNV--NQCKTSQISQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFS 276
KN+ + L+++DRN D +TPL TY+ +I+E GI
Sbjct: 210 KNERTFFDFPVMDSTPVLLILDRNTDPITPLLQPWTYQSMINEYIGIKRNIVDL------ 263
Query: 277 QSEEDSNFEKIVSDKKSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFD-TQ-NY 334
S +I D + + L+S + F RD ++ G K ++++ D TQ N
Sbjct: 264 -----SKVPRIDKDLEKVTLSSKQDAF--FRDTMYLNFGELGDKVKQYVTTYKDKTQTNS 316
Query: 335 HEKSVSEMKTLVQQLPHMINTKKLLANHTNI-AEL-----IKDVTDTAEF---LDALHAE 385
S+ ++K +++ P +A H I EL IK++ + +E L A A
Sbjct: 317 QINSIEDIKNFIEKYPEFRKLSGNVAKHMAIVGELDRQLKIKNIWEISEIEQNLSAHDAN 376
Query: 386 QEIF 389
+E F
Sbjct: 377 EEDF 380
>sp|Q7XWP3|SEC1A_ORYSJ Probable protein transport Sec1a OS=Oryza sativa subsp. japonica
GN=Os04g0252400 PE=3 SV=2
Length = 665
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 23/224 (10%)
Query: 174 PTCLYEVAQAI--ITLQNLYGIIPRVSGKGPCVQQVWDLTKRL-SLEPKNKNVNQCKTSQ 230
P Y VA+ I TL L + P G VW+ R ++ P+ C
Sbjct: 203 PRVHYRVARTIDASTLTTLRDLAPTKLAAG-----VWNCLARFKAMIPEFPQTETC---- 253
Query: 231 ISQLILIDRNVDVLTPLATQLTYEGLIDEIFGI--HNTTAKFPGAKFSQSEEDSNFEKIV 288
+L+++DR++D + P+ + TY+ + ++ + + + P S +E N E ++
Sbjct: 254 --ELLIVDRSIDQIAPIIHEWTYDAMCHDLLCMDGNKYVQQVPSKSGSGTE---NKEVLL 308
Query: 289 SDKKSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQF-DTQNYHEKSVSEMKTLVQ 347
D I L A +++ + ++SK +AQ +N + S E++ +VQ
Sbjct: 309 EDHDPIWLELRHVHIANASERLHEKMTNFVSKNK---AAQLHQARNGGDLSTKELQKMVQ 365
Query: 348 QLPHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEIFLG 391
LP + LA H IA + + D EQ++ G
Sbjct: 366 ALPQYSDQIDKLALHVEIAGKLNSTIKEQQLKDVGQLEQDLVFG 409
>sp|Q54GE3|VPS45_DICDI Vacuolar protein sorting-associated protein 45 OS=Dictyostelium
discoideum GN=vps45 PE=1 SV=1
Length = 563
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 176/397 (44%), Gaps = 51/397 (12%)
Query: 5 LSGGKVN-ISLVQDFARTQFLELLEKCSGKKAIIWDDALAGPVGLVANVQLLNERDVKRN 63
+SG +++ I+ +Q++ ++L G K ++ D AG V +V + +++V
Sbjct: 1 MSGKQMDVIASIQEYIN----KILTNIQGMKVLVLDKETAGIVSMVYTQSEILQKEVFLF 56
Query: 64 IHLKPGSLPPMENIANVIFITRPIVKHMDIIADNIKRKEKEKRSDTRRIDYHLFF---VP 120
++ + M ++ V FI RP +++ I D +K D + YHLFF +
Sbjct: 57 EKIE-NTKEKMLHMKGVYFI-RPTQENIQSICDELK--------DPKFNKYHLFFTNTIS 106
Query: 121 RKSLLCEQRLQENGVLGNFNIIEAFTCNLFPFDNDLVSMEMELAYREYHLEKDPTCLYEV 180
+ SL + E V+ I+ + + F + D ++ + + K P +V
Sbjct: 107 KVSLDEIAKADEQDVVSE---IQEYFGDFFAVNPDTFTLNLPGMLTK----KSPRWQGDV 159
Query: 181 AQAIITL-QNLYGI----IPRVSGKGPCVQQVWD-LTKRLSLEPKNKNVNQCKTSQISQL 234
+ + L +L + + R S + + + +T+R++ +++++ + L
Sbjct: 160 GRVVDGLFSSLLALKKKPVIRYSSNSDTTRYLAEKITERMN---RDRDLFDFRRQGEPLL 216
Query: 235 ILIDRNVDVLTPLATQLTYEGLIDEIFGIHN---TTAKFPGAKFSQSEEDSNFEKIVSDK 291
+++DR D +TPL Q TY+ +I E+ I+N + AK PG K E + + + K
Sbjct: 217 LILDRKDDPITPLLHQWTYQAMIHELLTINNNRVSLAKAPGIKDELKEVVLSLDHDIFYK 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
+++ N GD L A+++D + +F QN +++ +MK ++ P+
Sbjct: 277 ENLYKNFGD-LGASIKDLV-----------DQFQDKMNTNQNI--QTIDDMKKFIENYPN 322
Query: 352 MINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEI 388
++ H ++ + + + ++ +QE+
Sbjct: 323 FQKFSTTVSKHVSLMDELNRLISLDNLMEVSEVQQEL 359
>sp|Q9SZ77|SEC1B_ARATH Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=3
Length = 662
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 28/231 (12%)
Query: 170 LEKDPTCLYEVAQAI--ITLQNLYGIIPRVSGKGPCVQQVWDLTKRLSLEPKNKNVNQCK 227
L++ P Y A+A+ T+ +IP VW+ R + +
Sbjct: 199 LKEYPFVRYRGAKALDATTMTTYRELIP-----TKLAASVWNCLARY-----KQTIEDFP 248
Query: 228 TSQISQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKI 287
++ +L+++DR++D + PL + TY+ + ++ + G K++ +K
Sbjct: 249 QTETCELLILDRSIDQIAPLIHEWTYDAMCHDLLNME-------GNKYTHEVPSKTGDK- 300
Query: 288 VSDKKSIILNSGDELFAALRDKIFTGVGPYL-SKRAKFISA------QFDTQNYHEKSVS 340
+KK ++L+ D ++ LRD L K F+S + ++++ + S
Sbjct: 301 -PEKKEVLLDEEDSIWVELRDAHIADASERLHEKMTNFVSKNKAAQLKHSSKDFGDLSSK 359
Query: 341 EMKTLVQQLPHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEIFLG 391
+++ +V LP L+ H IA I D EQ++ G
Sbjct: 360 DLQKMVHALPQYSEQIDKLSLHVEIARTINRTIMEQGLRDLGQLEQDLVFG 410
>sp|P61765|STXB1_RAT Syntaxin-binding protein 1 OS=Rattus norvegicus GN=Stxbp1 PE=1 SV=1
Length = 594
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ ALR K V +++ K S+ N EK+ M+ L Q L
Sbjct: 277 KEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS-KRMNTGEKTT--MRDLSQMLKK 333
Query: 352 MINTKKLLANHTNIAELIKDVTDTAE-FLDAL-HAEQEIFLGVDTD 395
M +K L+ ++ L +D + +D L EQ++ +G D +
Sbjct: 334 MPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379
>sp|Q5R6D2|STXB1_PONAB Syntaxin-binding protein 1 OS=Pongo abelii GN=STXBP1 PE=2 SV=1
Length = 594
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ ALR K V +++ K S+ N EK+ M+ L Q L
Sbjct: 277 KEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS-KRMNTGEKTT--MRDLSQMLKK 333
Query: 352 MINTKKLLANHTNIAELIKDVTDTAE-FLDAL-HAEQEIFLGVDTD 395
M +K L+ ++ L +D + +D L EQ++ +G D +
Sbjct: 334 MPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379
>sp|O08599|STXB1_MOUSE Syntaxin-binding protein 1 OS=Mus musculus GN=Stxbp1 PE=1 SV=2
Length = 594
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ ALR K V +++ K S+ N EK+ M+ L Q L
Sbjct: 277 KEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS-KRMNTGEKTT--MRDLSQMLKK 333
Query: 352 MINTKKLLANHTNIAELIKDVTDTAE-FLDAL-HAEQEIFLGVDTD 395
M +K L+ ++ L +D + +D L EQ++ +G D +
Sbjct: 334 MPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379
>sp|P61764|STXB1_HUMAN Syntaxin-binding protein 1 OS=Homo sapiens GN=STXBP1 PE=1 SV=1
Length = 594
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ ALR K V +++ K S+ N EK+ M+ L Q L
Sbjct: 277 KEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS-KRMNTGEKTT--MRDLSQMLKK 333
Query: 352 MINTKKLLANHTNIAELIKDVTDTAE-FLDAL-HAEQEIFLGVDTD 395
M +K L+ ++ L +D + +D L EQ++ +G D +
Sbjct: 334 MPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379
>sp|P61763|STXB1_BOVIN Syntaxin-binding protein 1 OS=Bos taurus GN=STXBP1 PE=1 SV=1
Length = 594
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ ALR K V +++ K S+ N EK+ M+ L Q L
Sbjct: 277 KEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSS-KRMNTGEKTT--MRDLSQMLKK 333
Query: 352 MINTKKLLANHTNIAELIKDVTDTAE-FLDAL-HAEQEIFLGVDTD 395
M +K L+ ++ L +D + +D L EQ++ +G D +
Sbjct: 334 MPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379
>sp|Q62753|STXB2_RAT Syntaxin-binding protein 2 OS=Rattus norvegicus GN=Stxbp2 PE=2 SV=1
Length = 594
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D ++PL +LT++ + ++ I T ++ S+S E
Sbjct: 228 SQLLIMDRAADPVSPLLHELTFQAMAYDLLHIEQDTYRYETTGLSESRE----------- 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAK-FISAQFDTQNYHEKSVSEMKTLVQQLP 350
K+++L+ D+L+ LR V +++ K F ++ T + + ++ ++ +++++P
Sbjct: 277 KAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTD--KANIKDLSHILKKMP 334
Query: 351 HMINTKKLLANHTNIA-ELIKDVTDTAEFLDALHAEQEIFLGVDTDKA---------LPY 400
+ H ++A + +K + E L + EQ++ +G D + +P
Sbjct: 335 QYQKELNKYSTHLHLADDCMKHFKGSVEKLCGV--EQDLAMGSDAEGEKIKDTMKLIVPV 392
Query: 401 IENAIAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYGFQHILTL-SNLEQ-A 458
+ +A ++VL L + L+ V E ++IQ Q L NLEQ
Sbjct: 393 LLDASVPPYDKIRVLLLYIL-------LRNGVSEENLAKLIQHANVQSYSNLIRNLEQLG 445
Query: 459 GLLKNSQNSGTRQYTLLRKMMRLTVE 484
G + NS SGT R+ M T +
Sbjct: 446 GTVTNSAGSGTSSRLERRERMEPTYQ 471
>sp|Q54QC8|SEC1_DICDI Protein transport protein sec1 OS=Dictyostelium discoideum GN=sec1
PE=3 SV=1
Length = 598
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 30/225 (13%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
S L+++DR D L PL + +Y+ ++ ++F I N F D+ + K
Sbjct: 226 STLLILDRTQDPLAPLIHEFSYQAMVYDLFDIENDKFSF----------DTVTNAGATLK 275
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKR-AKFI-SAQFDTQNYHEKSVSEMKTLVQQL 349
K ++L D +++ LR + V L+ R +F+ + Q H S+ E +V+ L
Sbjct: 276 KDVLLGETDYMWSGLRHQHIADVSTNLTTRLDEFLKTNQVSQYGQHTGSLKEAGEVVRSL 335
Query: 350 PHMINTKKLLANHTNIAELIKDVTDTAEFLDALHAEQEIFLGVDTDKALP---------Y 400
P + H N+A+ + E + EQ++ G D + P Y
Sbjct: 336 PQYQEMMGKYSVHINLAD--RASAKFPELEQLAYLEQDLATGEDANGNSPKNVTGRLSNY 393
Query: 401 IENAIAHKKPLMKVLKLICMQSFTSSGLKPKVLEYYKREIIQTYG 445
+ + A K ++L+ M + G+K E +R +++ G
Sbjct: 394 LSDFSAEK---YNKIRLLMMYIISQDGIK----EEDRRRLMEMAG 431
>sp|Q6R748|STXB1_CHICK Syntaxin-binding protein 1 OS=Gallus gallus GN=STXBP1 PE=2 SV=1
Length = 594
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 232 SQLILIDRNVDVLTPLATQLTYEGLIDEIFGIHNTTAKFPGAKFSQSEEDSNFEKIVSDK 291
SQL+++DR D +P+ +LT++ + ++ I N K+ + ++
Sbjct: 228 SQLLILDRGFDPASPVLHELTFQAMSYDLLPIENDVYKYETSGIGEAR-----------V 276
Query: 292 KSIILNSGDELFAALRDKIFTGVGPYLSKRAKFISAQFDTQNYHEKSVSEMKTLVQQLPH 351
K ++L+ D+L+ +LR K V +++ K S+ + ++ ++ +++++P
Sbjct: 277 KEVLLDEDDDLWVSLRHKHIAEVSQEVTRSLKEFSSSKRMNTGDKTTMRDLSQMLKKMPQ 336
Query: 352 MINTKKLLANHTNIAE-LIKDVTDTAEFLDALHAEQEIFLGVDTD 395
+ H ++AE +K T + L EQ++ +G D +
Sbjct: 337 YQKELSKYSTHLHLAEDCMKHYQGTVDKL--CRVEQDLAMGTDAE 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,732,212
Number of Sequences: 539616
Number of extensions: 11229498
Number of successful extensions: 30772
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 30559
Number of HSP's gapped (non-prelim): 143
length of query: 820
length of database: 191,569,459
effective HSP length: 126
effective length of query: 694
effective length of database: 123,577,843
effective search space: 85763023042
effective search space used: 85763023042
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)