Query psy8894
Match_columns 306
No_of_seqs 198 out of 1865
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 22:11:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8894.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8894hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp4_A Succinyl-COA ligase [GD 100.0 7.7E-70 2.6E-74 509.9 32.7 288 17-306 1-305 (305)
2 1oi7_A Succinyl-COA synthetase 100.0 3.9E-70 1.3E-74 508.2 29.0 275 25-300 2-287 (288)
3 2yv2_A Succinyl-COA synthetase 100.0 6.2E-70 2.1E-74 508.9 30.1 279 22-301 5-296 (297)
4 2yv1_A Succinyl-COA ligase [AD 100.0 2.1E-69 7.3E-74 504.6 30.1 279 22-301 5-293 (294)
5 2nu8_A Succinyl-COA ligase [AD 100.0 9.2E-68 3.1E-72 492.2 31.4 275 25-300 2-287 (288)
6 3mwd_B ATP-citrate synthase; A 100.0 2.7E-63 9.1E-68 469.3 27.3 274 25-303 5-318 (334)
7 2csu_A 457AA long hypothetical 100.0 1.4E-60 4.6E-65 469.6 23.5 260 27-298 5-285 (457)
8 3pff_A ATP-citrate synthase; p 100.0 1.7E-59 5.7E-64 485.0 26.9 274 25-303 491-804 (829)
9 3dmy_A Protein FDRA; predicted 100.0 2.2E-44 7.7E-49 354.3 16.5 198 72-300 20-235 (480)
10 1iuk_A Hypothetical protein TT 99.9 6.9E-27 2.3E-31 195.1 6.3 129 19-155 2-133 (140)
11 3ff4_A Uncharacterized protein 99.9 7.4E-26 2.5E-30 184.7 10.2 114 28-153 2-118 (122)
12 2d59_A Hypothetical protein PH 99.9 1.6E-25 5.5E-30 187.6 9.6 128 17-154 9-139 (144)
13 2duw_A Putative COA-binding pr 99.9 1.1E-25 3.8E-30 188.8 8.2 129 19-155 2-133 (145)
14 1y81_A Conserved hypothetical 99.9 1.8E-24 6.1E-29 180.1 11.5 120 26-155 10-132 (138)
15 3ijp_A DHPR, dihydrodipicolina 99.4 7.2E-13 2.5E-17 122.5 9.4 123 25-152 16-151 (288)
16 4f3y_A DHPR, dihydrodipicolina 99.3 6.6E-12 2.2E-16 115.3 9.1 118 30-152 7-136 (272)
17 3keo_A Redox-sensing transcrip 99.2 2.7E-12 9.3E-17 113.7 3.7 101 19-120 73-181 (212)
18 1dih_A Dihydrodipicolinate red 99.2 3.4E-11 1.2E-15 110.6 7.1 119 29-152 4-135 (273)
19 3qy9_A DHPR, dihydrodipicolina 99.2 4E-11 1.4E-15 108.3 7.4 113 30-153 3-116 (243)
20 1p9l_A Dihydrodipicolinate red 99.1 7.1E-10 2.4E-14 100.3 11.9 106 31-151 1-110 (245)
21 2dt5_A AT-rich DNA-binding pro 98.9 1.1E-09 3.7E-14 96.9 6.2 95 23-120 73-173 (211)
22 2vt3_A REX, redox-sensing tran 98.9 2.3E-09 8E-14 95.0 7.1 95 24-121 79-179 (215)
23 2dc1_A L-aspartate dehydrogena 98.9 1E-08 3.4E-13 91.4 10.3 114 31-152 1-116 (236)
24 1vm6_A DHPR, dihydrodipicolina 98.8 1.1E-08 3.7E-13 91.2 8.1 104 29-151 11-115 (228)
25 4ew6_A D-galactose-1-dehydroge 98.8 2.7E-08 9.2E-13 93.1 11.2 107 30-142 25-135 (330)
26 3q2i_A Dehydrogenase; rossmann 98.8 4.3E-08 1.5E-12 92.2 11.7 116 28-146 11-134 (354)
27 3o9z_A Lipopolysaccaride biosy 98.7 1.3E-07 4.4E-12 87.9 14.2 112 29-142 2-126 (312)
28 3kux_A Putative oxidoreductase 98.7 3.8E-08 1.3E-12 92.6 10.3 113 27-142 4-121 (352)
29 3db2_A Putative NADPH-dependen 98.7 2.5E-08 8.6E-13 93.8 9.0 116 28-146 3-125 (354)
30 3euw_A MYO-inositol dehydrogen 98.7 3.9E-08 1.3E-12 92.0 10.2 111 29-142 3-119 (344)
31 3evn_A Oxidoreductase, GFO/IDH 98.7 1.8E-07 6.3E-12 87.0 12.9 115 29-146 4-126 (329)
32 4gmf_A Yersiniabactin biosynth 98.7 4.1E-08 1.4E-12 93.7 8.6 109 28-143 5-123 (372)
33 3e9m_A Oxidoreductase, GFO/IDH 98.7 1.3E-07 4.5E-12 88.2 11.7 115 29-146 4-126 (330)
34 3moi_A Probable dehydrogenase; 98.7 6.9E-08 2.3E-12 92.1 9.6 114 30-146 2-123 (387)
35 4hkt_A Inositol 2-dehydrogenas 98.7 1.1E-07 3.8E-12 88.4 10.8 110 30-143 3-118 (331)
36 4fb5_A Probable oxidoreductase 98.6 1E-07 3.4E-12 89.8 10.6 113 29-146 24-153 (393)
37 3i23_A Oxidoreductase, GFO/IDH 98.6 7.7E-08 2.6E-12 90.4 9.6 109 30-142 2-119 (349)
38 3e18_A Oxidoreductase; dehydro 98.6 1.2E-07 4.2E-12 89.5 10.8 115 29-146 4-124 (359)
39 3u3x_A Oxidoreductase; structu 98.6 2.5E-07 8.5E-12 87.5 12.8 121 13-142 15-142 (361)
40 3ec7_A Putative dehydrogenase; 98.6 1.1E-07 3.7E-12 89.8 10.3 110 30-142 23-141 (357)
41 3rc1_A Sugar 3-ketoreductase; 98.6 7.1E-08 2.4E-12 90.8 8.9 112 29-143 26-144 (350)
42 3fhl_A Putative oxidoreductase 98.6 8.4E-08 2.9E-12 90.6 9.4 115 29-146 4-124 (362)
43 4had_A Probable oxidoreductase 98.6 7.1E-08 2.4E-12 90.3 8.7 115 25-142 18-140 (350)
44 3oa2_A WBPB; oxidoreductase, s 98.6 3.9E-07 1.3E-11 84.8 13.6 111 30-142 3-127 (318)
45 3e82_A Putative oxidoreductase 98.6 1.7E-07 6E-12 88.6 10.9 116 28-146 5-126 (364)
46 3c1a_A Putative oxidoreductase 98.6 2E-07 6.9E-12 86.1 10.8 116 28-146 8-128 (315)
47 3btv_A Galactose/lactose metab 98.6 2.1E-07 7.1E-12 90.4 11.3 113 29-142 19-149 (438)
48 1ydw_A AX110P-like protein; st 98.6 2.1E-07 7.1E-12 87.7 10.5 116 28-146 4-130 (362)
49 1lc0_A Biliverdin reductase A; 98.6 3.1E-07 1.1E-11 84.5 11.5 114 28-146 5-124 (294)
50 3ezy_A Dehydrogenase; structur 98.6 1.5E-07 5.3E-12 88.0 9.5 109 31-142 3-118 (344)
51 3mz0_A Inositol 2-dehydrogenas 98.6 1.5E-07 5.2E-12 88.1 9.3 110 31-143 3-121 (344)
52 1zh8_A Oxidoreductase; TM0312, 98.6 2.2E-07 7.7E-12 87.0 10.3 114 27-143 15-137 (340)
53 2p2s_A Putative oxidoreductase 98.6 6.4E-07 2.2E-11 83.4 13.3 112 29-143 3-121 (336)
54 1tlt_A Putative oxidoreductase 98.6 3.2E-07 1.1E-11 84.9 11.1 110 29-143 4-120 (319)
55 3gdo_A Uncharacterized oxidore 98.6 1.5E-07 5.2E-12 88.7 8.9 115 29-146 4-124 (358)
56 4gqa_A NAD binding oxidoreduct 98.6 1.5E-07 5.2E-12 90.2 8.9 117 27-146 23-155 (412)
57 1f06_A MESO-diaminopimelate D- 98.5 9.3E-08 3.2E-12 89.2 7.2 113 29-146 2-118 (320)
58 3f4l_A Putative oxidoreductase 98.5 1.9E-07 6.4E-12 87.6 9.2 110 30-142 2-119 (345)
59 3cea_A MYO-inositol 2-dehydrog 98.5 3.6E-07 1.2E-11 85.2 11.0 113 28-143 6-127 (346)
60 3uuw_A Putative oxidoreductase 98.5 2.3E-07 7.9E-12 85.4 8.8 109 29-142 5-120 (308)
61 3bio_A Oxidoreductase, GFO/IDH 98.5 1.8E-07 6.1E-12 86.7 7.6 110 29-144 8-123 (304)
62 2glx_A 1,5-anhydro-D-fructose 98.5 6.1E-07 2.1E-11 83.1 10.7 112 32-146 2-121 (332)
63 2nvw_A Galactose/lactose metab 98.5 6.5E-07 2.2E-11 88.1 11.3 113 29-142 38-169 (479)
64 2ho3_A Oxidoreductase, GFO/IDH 98.5 6.1E-07 2.1E-11 83.2 10.6 112 31-146 2-121 (325)
65 3ohs_X Trans-1,2-dihydrobenzen 98.5 6E-07 2E-11 83.6 9.9 111 30-143 2-121 (334)
66 3m2t_A Probable dehydrogenase; 98.4 5.6E-07 1.9E-11 84.9 9.4 111 29-142 4-122 (359)
67 1h6d_A Precursor form of gluco 98.4 3.5E-07 1.2E-11 88.7 7.9 116 28-146 81-209 (433)
68 3dty_A Oxidoreductase, GFO/IDH 98.4 1.9E-06 6.4E-11 82.4 11.3 111 29-142 11-139 (398)
69 3v5n_A Oxidoreductase; structu 98.4 1.4E-06 4.9E-11 83.9 10.3 116 28-146 35-169 (417)
70 1j5p_A Aspartate dehydrogenase 98.4 6.7E-07 2.3E-11 81.0 7.4 110 28-147 10-120 (253)
71 2ixa_A Alpha-N-acetylgalactosa 98.3 1.2E-06 4.2E-11 85.0 9.0 115 29-146 19-150 (444)
72 3oqb_A Oxidoreductase; structu 98.3 8.2E-07 2.8E-11 84.1 6.5 117 28-146 4-142 (383)
73 3ip3_A Oxidoreductase, putativ 98.3 1.3E-06 4.5E-11 81.5 7.8 108 30-141 2-120 (337)
74 4h3v_A Oxidoreductase domain p 98.3 6.9E-07 2.4E-11 83.9 5.8 115 30-146 6-137 (390)
75 3upl_A Oxidoreductase; rossman 98.2 8.8E-07 3E-11 86.3 5.8 114 27-143 20-162 (446)
76 3nkl_A UDP-D-quinovosamine 4-d 98.2 3.9E-06 1.3E-10 68.0 7.0 87 28-116 2-97 (141)
77 1xea_A Oxidoreductase, GFO/IDH 98.1 8.7E-06 3E-10 75.3 8.9 108 31-143 3-118 (323)
78 2csu_A 457AA long hypothetical 98.0 0.00024 8.2E-09 69.4 18.2 238 31-301 150-446 (457)
79 3do5_A HOM, homoserine dehydro 98.0 2.3E-05 7.9E-10 73.4 10.5 157 31-197 3-189 (327)
80 3mtj_A Homoserine dehydrogenas 97.9 6.1E-06 2.1E-10 80.5 4.9 113 28-143 8-133 (444)
81 4dll_A 2-hydroxy-3-oxopropiona 97.8 9.2E-05 3.1E-09 68.6 10.9 110 30-144 31-147 (320)
82 3c8m_A Homoserine dehydrogenas 97.8 4.3E-05 1.5E-09 71.6 7.8 111 29-143 5-144 (331)
83 4e21_A 6-phosphogluconate dehy 97.8 6.2E-05 2.1E-09 71.3 8.6 112 29-144 21-138 (358)
84 3pef_A 6-phosphogluconate dehy 97.8 6.8E-05 2.3E-09 68.1 8.5 109 31-144 2-118 (287)
85 3tri_A Pyrroline-5-carboxylate 97.7 9.3E-05 3.2E-09 67.4 9.1 95 30-128 3-107 (280)
86 3qsg_A NAD-binding phosphogluc 97.7 9.5E-05 3.3E-09 68.3 9.1 112 29-145 23-143 (312)
87 2rcy_A Pyrroline carboxylate r 97.7 8.7E-05 3E-09 66.1 8.4 89 31-126 5-98 (262)
88 2ozp_A N-acetyl-gamma-glutamyl 97.7 0.0001 3.4E-09 69.5 8.6 89 30-123 4-103 (345)
89 3qha_A Putative oxidoreductase 97.7 0.00016 5.6E-09 66.1 9.8 109 30-144 15-128 (296)
90 3d1l_A Putative NADP oxidoredu 97.7 5.6E-05 1.9E-09 67.7 6.5 93 31-126 11-109 (266)
91 2h78_A Hibadh, 3-hydroxyisobut 97.7 0.00012 4.2E-09 66.7 8.9 109 30-143 3-119 (302)
92 3fr7_A Putative ketol-acid red 97.7 4E-05 1.4E-09 75.3 5.7 118 31-151 55-186 (525)
93 2ahr_A Putative pyrroline carb 97.6 4.7E-05 1.6E-09 67.9 5.4 91 30-126 3-97 (259)
94 3ing_A Homoserine dehydrogenas 97.6 9.2E-05 3.2E-09 69.3 7.2 161 29-199 3-192 (325)
95 3l6d_A Putative oxidoreductase 97.6 0.00017 5.7E-09 66.4 8.7 109 30-144 9-124 (306)
96 3pdu_A 3-hydroxyisobutyrate de 97.6 0.00015 5.1E-09 65.8 8.2 109 31-144 2-118 (287)
97 4gbj_A 6-phosphogluconate dehy 97.6 0.00064 2.2E-08 62.5 12.3 111 31-147 6-124 (297)
98 3doj_A AT3G25530, dehydrogenas 97.6 0.00017 5.8E-09 66.4 8.3 110 30-144 21-138 (310)
99 1yb4_A Tartronic semialdehyde 97.6 0.00026 8.8E-09 64.0 9.2 108 30-144 3-119 (295)
100 4huj_A Uncharacterized protein 97.5 7.8E-05 2.7E-09 65.3 4.9 95 26-123 19-117 (220)
101 3cky_A 2-hydroxymethyl glutara 97.5 0.00064 2.2E-08 61.6 11.1 109 29-143 3-120 (301)
102 3dmy_A Protein FDRA; predicted 97.5 0.0039 1.3E-07 61.2 16.7 236 29-301 111-413 (480)
103 1nvm_B Acetaldehyde dehydrogen 97.5 0.00016 5.4E-09 67.2 6.4 90 29-120 3-105 (312)
104 3ggo_A Prephenate dehydrogenas 97.4 0.0005 1.7E-08 63.7 9.8 89 31-123 34-131 (314)
105 1z82_A Glycerol-3-phosphate de 97.4 8.6E-05 2.9E-09 69.0 4.5 91 29-125 13-117 (335)
106 1vpd_A Tartronate semialdehyde 97.4 0.00043 1.5E-08 62.7 8.5 107 31-144 6-122 (299)
107 3b1f_A Putative prephenate deh 97.4 0.00043 1.5E-08 62.6 8.4 110 30-144 6-124 (290)
108 2izz_A Pyrroline-5-carboxylate 97.4 0.00045 1.5E-08 63.9 8.7 93 30-126 22-125 (322)
109 2uyy_A N-PAC protein; long-cha 97.4 0.00063 2.2E-08 62.3 9.6 109 30-144 30-147 (316)
110 3ic5_A Putative saccharopine d 97.4 0.00012 4.2E-09 56.3 4.0 86 30-120 5-101 (118)
111 2py6_A Methyltransferase FKBM; 97.3 3.9E-05 1.3E-09 73.8 1.0 87 28-118 50-140 (409)
112 3dr3_A N-acetyl-gamma-glutamyl 97.3 0.0003 1E-08 66.1 6.9 90 31-123 5-110 (337)
113 2gf2_A Hibadh, 3-hydroxyisobut 97.3 0.00091 3.1E-08 60.4 9.9 107 32-143 2-116 (296)
114 1ebf_A Homoserine dehydrogenas 97.3 0.00018 6.3E-09 68.1 5.3 109 29-143 3-140 (358)
115 2czc_A Glyceraldehyde-3-phosph 97.3 0.00027 9.3E-09 66.1 6.3 87 31-122 3-112 (334)
116 2zyd_A 6-phosphogluconate dehy 97.3 0.00039 1.3E-08 68.2 7.6 110 30-143 15-135 (480)
117 2ejw_A HDH, homoserine dehydro 97.3 0.00019 6.5E-09 67.3 5.0 103 30-138 3-116 (332)
118 3ufx_B Succinyl-COA synthetase 97.3 0.0011 3.6E-08 63.7 10.0 110 167-297 246-371 (397)
119 2pgd_A 6-phosphogluconate dehy 97.3 0.00067 2.3E-08 66.5 8.8 109 31-143 3-123 (482)
120 3ulk_A Ketol-acid reductoisome 97.3 0.00024 8.1E-09 68.9 5.4 101 15-123 25-135 (491)
121 3gt0_A Pyrroline-5-carboxylate 97.3 0.00028 9.7E-09 62.6 5.6 92 31-126 3-104 (247)
122 1np3_A Ketol-acid reductoisome 97.2 0.00026 9E-09 66.2 5.3 89 29-122 15-109 (338)
123 3obb_A Probable 3-hydroxyisobu 97.2 0.0015 5.1E-08 60.2 10.1 108 30-143 3-119 (300)
124 1b7g_O Protein (glyceraldehyde 97.2 0.0004 1.4E-08 65.2 6.3 84 31-117 2-107 (340)
125 3abi_A Putative uncharacterize 97.2 0.00044 1.5E-08 65.1 6.6 110 29-147 15-132 (365)
126 3ba1_A HPPR, hydroxyphenylpyru 97.2 0.00052 1.8E-08 64.3 7.0 106 30-144 164-274 (333)
127 2ep5_A 350AA long hypothetical 97.2 0.00045 1.5E-08 65.1 6.6 90 29-122 3-111 (350)
128 2g0t_A Conserved hypothetical 97.2 0.0015 5.3E-08 61.6 10.2 114 26-145 18-150 (350)
129 1i36_A Conserved hypothetical 97.2 0.0009 3.1E-08 59.5 8.2 88 32-126 2-94 (264)
130 2p4q_A 6-phosphogluconate dehy 97.2 0.00096 3.3E-08 65.8 9.0 110 31-144 11-132 (497)
131 2cvz_A Dehydrogenase, 3-hydrox 97.2 0.001 3.4E-08 59.8 8.5 107 31-144 2-113 (289)
132 3dhn_A NAD-dependent epimerase 97.2 0.00084 2.9E-08 57.7 7.7 88 30-120 4-112 (227)
133 3k96_A Glycerol-3-phosphate de 97.2 0.00056 1.9E-08 64.6 7.1 93 29-125 28-139 (356)
134 4ezb_A Uncharacterized conserv 97.2 0.00083 2.8E-08 62.2 8.1 107 31-144 25-144 (317)
135 2g5c_A Prephenate dehydrogenas 97.2 0.0014 4.8E-08 58.9 9.3 90 31-124 2-100 (281)
136 3g0o_A 3-hydroxyisobutyrate de 97.2 0.0004 1.4E-08 63.5 5.7 110 30-144 7-125 (303)
137 4gwg_A 6-phosphogluconate dehy 97.2 0.001 3.4E-08 65.5 8.6 112 30-145 4-127 (484)
138 2pv7_A T-protein [includes: ch 97.1 0.0018 6.3E-08 59.1 9.9 81 31-125 22-104 (298)
139 1xyg_A Putative N-acetyl-gamma 97.1 0.00066 2.3E-08 64.2 7.0 89 30-123 16-116 (359)
140 2iz1_A 6-phosphogluconate dehy 97.1 0.00084 2.9E-08 65.7 7.8 110 31-144 6-126 (474)
141 3m2p_A UDP-N-acetylglucosamine 97.1 0.0038 1.3E-07 56.4 11.7 86 31-120 3-109 (311)
142 4dpk_A Malonyl-COA/succinyl-CO 97.1 0.00064 2.2E-08 64.4 6.7 93 27-123 4-114 (359)
143 4dpl_A Malonyl-COA/succinyl-CO 97.1 0.00064 2.2E-08 64.4 6.7 93 27-123 4-114 (359)
144 1cf2_P Protein (glyceraldehyde 97.1 0.001 3.6E-08 62.3 7.9 86 31-121 2-110 (337)
145 2f1k_A Prephenate dehydrogenas 97.1 0.0013 4.3E-08 59.1 8.0 91 31-126 1-97 (279)
146 1yqg_A Pyrroline-5-carboxylate 97.1 0.00027 9.1E-09 62.9 3.5 87 31-124 1-93 (263)
147 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.1 0.0012 4.1E-08 64.7 8.2 109 31-143 2-125 (478)
148 3c24_A Putative oxidoreductase 97.0 0.00084 2.9E-08 60.7 6.2 88 31-122 12-104 (286)
149 2hjs_A USG-1 protein homolog; 97.0 0.0013 4.5E-08 61.7 7.6 89 31-123 7-103 (340)
150 1t4b_A Aspartate-semialdehyde 96.9 0.0027 9.2E-08 60.2 9.1 88 31-122 2-101 (367)
151 3hsk_A Aspartate-semialdehyde 96.9 0.0018 6.3E-08 61.7 7.9 91 30-123 19-128 (381)
152 3ktd_A Prephenate dehydrogenas 96.9 0.0013 4.5E-08 61.7 6.7 92 30-123 8-104 (341)
153 4dgs_A Dehydrogenase; structur 96.9 0.0015 5.1E-08 61.4 7.1 87 30-122 171-261 (340)
154 2z2v_A Hypothetical protein PH 96.9 0.0014 4.8E-08 62.0 6.9 107 28-143 14-129 (365)
155 3dtt_A NADP oxidoreductase; st 96.9 0.00082 2.8E-08 59.7 4.8 88 30-121 19-126 (245)
156 1ys4_A Aspartate-semialdehyde 96.9 0.0016 5.5E-08 61.3 7.0 90 31-122 9-117 (354)
157 3e5r_O PP38, glyceraldehyde-3- 96.9 0.0015 5.2E-08 61.3 6.7 86 31-117 4-123 (337)
158 3gvx_A Glycerate dehydrogenase 96.8 0.0014 4.6E-08 60.3 6.0 69 30-104 122-191 (290)
159 3pzr_A Aspartate-semialdehyde 96.8 0.006 2.1E-07 57.9 10.4 114 31-148 1-135 (370)
160 4egb_A DTDP-glucose 4,6-dehydr 96.8 0.0036 1.2E-07 57.3 8.5 92 28-120 22-149 (346)
161 1u8f_O GAPDH, glyceraldehyde-3 96.7 0.0012 4E-08 61.9 4.9 88 31-120 4-123 (335)
162 3uw3_A Aspartate-semialdehyde 96.7 0.0062 2.1E-07 58.0 9.9 114 30-148 4-139 (377)
163 4e12_A Diketoreductase; oxidor 96.7 0.0023 7.7E-08 58.0 6.4 93 30-126 4-128 (283)
164 1evy_A Glycerol-3-phosphate de 96.7 0.0011 3.7E-08 62.1 4.4 89 32-125 17-130 (366)
165 4ea9_A Perosamine N-acetyltran 96.7 0.0041 1.4E-07 54.1 7.8 89 30-119 12-103 (220)
166 1jay_A Coenzyme F420H2:NADP+ o 96.7 0.002 6.8E-08 55.2 5.4 89 31-123 1-101 (212)
167 1x0v_A GPD-C, GPDH-C, glycerol 96.7 0.0059 2E-07 56.6 9.0 89 31-123 9-128 (354)
168 1vkn_A N-acetyl-gamma-glutamyl 96.6 0.0035 1.2E-07 59.1 7.2 90 29-123 12-111 (351)
169 3pwk_A Aspartate-semialdehyde 96.6 0.004 1.4E-07 59.1 7.3 89 31-123 3-99 (366)
170 1txg_A Glycerol-3-phosphate de 96.6 0.0014 4.8E-08 60.1 4.0 88 31-122 1-107 (335)
171 1mv8_A GMD, GDP-mannose 6-dehy 96.6 0.013 4.6E-07 56.3 11.0 75 31-109 1-108 (436)
172 2obn_A Hypothetical protein; s 96.5 0.0051 1.7E-07 58.0 7.7 114 26-145 3-133 (349)
173 3pid_A UDP-glucose 6-dehydroge 96.5 0.0079 2.7E-07 58.2 9.2 112 30-148 36-179 (432)
174 3pp8_A Glyoxylate/hydroxypyruv 96.5 0.0019 6.6E-08 60.0 4.6 83 29-117 138-226 (315)
175 3gg2_A Sugar dehydrogenase, UD 96.5 0.016 5.4E-07 56.3 10.8 91 31-125 3-127 (450)
176 3hwr_A 2-dehydropantoate 2-red 96.4 0.0065 2.2E-07 55.9 7.7 96 26-125 15-126 (318)
177 3e48_A Putative nucleoside-dip 96.4 0.014 4.7E-07 52.0 9.7 87 31-120 1-106 (289)
178 4id9_A Short-chain dehydrogena 96.4 0.01 3.5E-07 54.2 9.0 90 28-120 17-126 (347)
179 3ruf_A WBGU; rossmann fold, UD 96.4 0.0035 1.2E-07 57.5 5.8 90 29-120 24-151 (351)
180 3dqp_A Oxidoreductase YLBE; al 96.4 0.0061 2.1E-07 52.2 7.0 87 31-120 1-106 (219)
181 3qvo_A NMRA family protein; st 96.4 0.0059 2E-07 53.2 6.9 88 30-120 23-125 (236)
182 2raf_A Putative dinucleotide-b 96.4 0.0075 2.6E-07 52.2 7.5 75 30-123 19-94 (209)
183 1qp8_A Formate dehydrogenase; 96.4 0.0066 2.3E-07 55.9 7.5 69 29-104 123-192 (303)
184 2ew2_A 2-dehydropantoate 2-red 96.4 0.0054 1.9E-07 55.3 6.8 92 31-124 4-113 (316)
185 2r00_A Aspartate-semialdehyde 96.4 0.0066 2.2E-07 56.8 7.5 91 30-122 3-99 (336)
186 1mx3_A CTBP1, C-terminal bindi 96.4 0.0026 8.9E-08 59.9 4.7 107 29-141 167-279 (347)
187 2rir_A Dipicolinate synthase, 96.4 0.0016 5.3E-08 59.7 3.1 115 29-153 156-276 (300)
188 3i83_A 2-dehydropantoate 2-red 96.4 0.0051 1.8E-07 56.6 6.6 90 31-125 3-111 (320)
189 3r6d_A NAD-dependent epimerase 96.4 0.016 5.6E-07 49.5 9.4 86 31-120 6-108 (221)
190 1bg6_A N-(1-D-carboxylethyl)-L 96.4 0.0082 2.8E-07 55.4 8.0 89 30-122 4-111 (359)
191 4fgw_A Glycerol-3-phosphate de 96.4 0.0053 1.8E-07 58.7 6.8 94 26-123 30-155 (391)
192 1f0y_A HCDH, L-3-hydroxyacyl-C 96.3 0.0056 1.9E-07 55.8 6.5 92 30-125 15-142 (302)
193 3vps_A TUNA, NAD-dependent epi 96.3 0.017 6E-07 51.7 9.8 88 30-120 7-119 (321)
194 1lss_A TRK system potassium up 96.3 0.022 7.6E-07 44.7 9.2 90 31-122 5-105 (140)
195 2nu8_B SCS-beta, succinyl-COA 96.3 0.036 1.2E-06 52.8 12.2 110 167-297 255-382 (388)
196 3e8x_A Putative NAD-dependent 96.3 0.011 3.7E-07 51.2 7.8 88 30-120 21-131 (236)
197 3d4o_A Dipicolinate synthase s 96.3 0.0026 8.9E-08 58.0 4.0 115 29-153 154-274 (293)
198 2g1u_A Hypothetical protein TM 96.3 0.034 1.2E-06 45.2 10.5 97 23-122 13-121 (155)
199 2w2k_A D-mandelate dehydrogena 96.3 0.012 4E-07 55.3 8.4 88 30-121 163-258 (348)
200 2vns_A Metalloreductase steap3 96.2 0.0023 8E-08 55.6 3.3 89 30-125 28-121 (215)
201 1ks9_A KPA reductase;, 2-dehyd 96.2 0.014 5E-07 51.9 8.6 89 31-124 1-102 (291)
202 2fp4_B Succinyl-COA ligase [GD 96.2 0.04 1.4E-06 52.6 11.9 109 167-296 262-388 (395)
203 1yj8_A Glycerol-3-phosphate de 96.2 0.0071 2.4E-07 56.8 6.5 90 31-124 22-146 (375)
204 3hn2_A 2-dehydropantoate 2-red 96.2 0.022 7.4E-07 52.1 9.6 88 31-124 3-108 (312)
205 3cps_A Glyceraldehyde 3-phosph 96.2 0.0045 1.5E-07 58.4 5.0 90 27-117 14-135 (354)
206 4g2n_A D-isomer specific 2-hyd 96.1 0.011 3.8E-07 55.5 7.5 84 30-117 173-260 (345)
207 1hdo_A Biliverdin IX beta redu 96.1 0.014 4.9E-07 48.7 7.5 87 31-120 4-111 (206)
208 4ina_A Saccharopine dehydrogen 96.1 0.015 5E-07 55.6 8.3 113 31-147 2-142 (405)
209 2q3e_A UDP-glucose 6-dehydroge 96.1 0.025 8.4E-07 55.0 10.0 65 31-99 6-94 (467)
210 1sc6_A PGDH, D-3-phosphoglycer 96.1 0.016 5.6E-07 55.5 8.5 89 29-122 144-236 (404)
211 1gdh_A D-glycerate dehydrogena 96.1 0.0062 2.1E-07 56.5 5.4 72 29-104 145-220 (320)
212 2nqt_A N-acetyl-gamma-glutamyl 96.1 0.0053 1.8E-07 57.9 4.9 88 31-123 10-114 (352)
213 2yjz_A Metalloreductase steap4 95.0 0.0011 3.6E-08 57.5 0.0 90 28-123 17-109 (201)
214 2hmt_A YUAA protein; RCK, KTN, 96.0 0.018 6.3E-07 45.3 7.4 109 30-147 6-126 (144)
215 3st7_A Capsular polysaccharide 96.0 0.041 1.4E-06 50.8 10.9 78 31-120 1-94 (369)
216 3a06_A 1-deoxy-D-xylulose 5-ph 96.0 0.018 6.1E-07 54.5 8.3 107 31-143 4-139 (376)
217 3dfu_A Uncharacterized protein 95.9 0.043 1.5E-06 48.7 10.0 89 30-144 6-95 (232)
218 4a7p_A UDP-glucose dehydrogena 95.9 0.031 1.1E-06 54.2 9.8 98 30-131 8-140 (446)
219 3evt_A Phosphoglycerate dehydr 95.9 0.011 3.7E-07 55.1 6.3 72 29-104 136-209 (324)
220 2nac_A NAD-dependent formate d 95.9 0.0083 2.8E-07 57.4 5.5 89 29-121 190-285 (393)
221 1dxy_A D-2-hydroxyisocaproate 95.9 0.011 3.9E-07 55.1 6.3 65 30-99 145-209 (333)
222 3ius_A Uncharacterized conserv 95.9 0.2 7E-06 44.1 14.4 88 31-120 6-103 (286)
223 2i76_A Hypothetical protein; N 95.9 0.00073 2.5E-08 61.0 -1.9 89 31-125 3-95 (276)
224 1qyc_A Phenylcoumaran benzylic 95.9 0.031 1.1E-06 49.9 9.0 87 30-119 4-112 (308)
225 1xdw_A NAD+-dependent (R)-2-hy 95.8 0.011 3.8E-07 55.1 6.0 65 29-98 145-209 (331)
226 2ekl_A D-3-phosphoglycerate de 95.8 0.0084 2.9E-07 55.4 5.1 66 29-99 141-208 (313)
227 2qyt_A 2-dehydropantoate 2-red 95.8 0.007 2.4E-07 54.8 4.5 90 30-124 8-122 (317)
228 2x5j_O E4PDH, D-erythrose-4-ph 95.8 0.014 5E-07 54.6 6.7 90 31-121 3-126 (339)
229 3tz6_A Aspartate-semialdehyde 95.8 0.02 6.9E-07 53.8 7.6 89 31-122 2-97 (344)
230 2y0c_A BCEC, UDP-glucose dehyd 95.8 0.022 7.4E-07 55.7 8.2 91 30-124 8-132 (478)
231 3jtm_A Formate dehydrogenase, 95.7 0.012 4E-07 55.5 5.9 85 29-117 163-253 (351)
232 2g82_O GAPDH, glyceraldehyde-3 95.7 0.02 6.8E-07 53.5 7.3 88 32-120 2-119 (331)
233 2cuk_A Glycerate dehydrogenase 95.7 0.013 4.3E-07 54.2 6.0 68 29-104 143-211 (311)
234 1qyd_A Pinoresinol-lariciresin 95.7 0.033 1.1E-06 49.9 8.5 85 30-116 4-113 (313)
235 2o3j_A UDP-glucose 6-dehydroge 95.7 0.1 3.4E-06 50.9 12.5 90 30-123 9-138 (481)
236 1dlj_A UDP-glucose dehydrogena 95.6 0.018 6.1E-07 55.0 6.8 83 31-118 1-115 (402)
237 3enk_A UDP-glucose 4-epimerase 95.6 0.036 1.2E-06 50.3 8.6 91 29-120 4-129 (341)
238 3k5p_A D-3-phosphoglycerate de 95.6 0.046 1.6E-06 52.6 9.6 89 29-122 155-247 (416)
239 3i6i_A Putative leucoanthocyan 95.6 0.054 1.9E-06 49.6 9.8 88 30-117 10-117 (346)
240 1r0k_A 1-deoxy-D-xylulose 5-ph 95.6 0.024 8.2E-07 54.1 7.5 109 30-143 4-147 (388)
241 2d0i_A Dehydrogenase; structur 95.6 0.024 8.3E-07 52.7 7.4 87 29-122 145-238 (333)
242 3b1j_A Glyceraldehyde 3-phosph 95.6 0.032 1.1E-06 52.3 8.1 86 31-117 3-121 (339)
243 2dpo_A L-gulonate 3-dehydrogen 95.6 0.0044 1.5E-07 57.6 2.1 93 30-126 6-130 (319)
244 2wm3_A NMRA-like family domain 95.5 0.034 1.2E-06 49.7 7.9 186 30-225 5-236 (299)
245 1wwk_A Phosphoglycerate dehydr 95.5 0.015 5E-07 53.6 5.4 66 29-99 141-208 (307)
246 2yq5_A D-isomer specific 2-hyd 95.5 0.014 4.9E-07 54.7 5.3 63 30-97 148-210 (343)
247 2j6i_A Formate dehydrogenase; 95.5 0.014 4.9E-07 55.1 5.3 66 29-98 163-232 (364)
248 2zcu_A Uncharacterized oxidore 95.5 0.035 1.2E-06 48.9 7.7 86 32-120 1-104 (286)
249 3ew7_A LMO0794 protein; Q8Y8U8 95.5 0.042 1.4E-06 46.4 7.8 87 31-120 1-103 (221)
250 1j4a_A D-LDH, D-lactate dehydr 95.4 0.013 4.3E-07 54.7 4.8 64 30-98 146-210 (333)
251 2g76_A 3-PGDH, D-3-phosphoglyc 95.4 0.028 9.7E-07 52.5 7.2 88 29-121 164-257 (335)
252 3g79_A NDP-N-acetyl-D-galactos 95.4 0.12 3.9E-06 50.7 11.8 33 30-64 18-52 (478)
253 2dbq_A Glyoxylate reductase; D 95.4 0.028 9.6E-07 52.3 7.1 65 30-99 150-216 (334)
254 2d2i_A Glyceraldehyde 3-phosph 95.4 0.031 1.1E-06 53.1 7.4 86 31-117 3-121 (380)
255 2gas_A Isoflavone reductase; N 95.3 0.049 1.7E-06 48.6 8.3 86 31-119 3-111 (307)
256 2pi1_A D-lactate dehydrogenase 95.3 0.016 5.5E-07 54.1 5.2 83 30-117 141-227 (334)
257 3c1o_A Eugenol synthase; pheny 95.3 0.05 1.7E-06 49.0 8.4 85 30-116 4-110 (321)
258 2bka_A CC3, TAT-interacting pr 95.3 0.077 2.6E-06 45.6 9.3 89 30-120 18-132 (242)
259 3cmc_O GAPDH, glyceraldehyde-3 95.3 0.026 8.9E-07 52.8 6.5 86 31-117 2-118 (334)
260 2x4g_A Nucleoside-diphosphate- 95.3 0.045 1.5E-06 49.6 8.0 88 31-120 14-126 (342)
261 1xq6_A Unknown protein; struct 95.3 0.14 4.7E-06 43.9 10.8 88 30-120 4-133 (253)
262 1hdg_O Holo-D-glyceraldehyde-3 95.3 0.027 9.1E-07 52.6 6.5 86 31-117 1-119 (332)
263 1zej_A HBD-9, 3-hydroxyacyl-CO 95.2 0.0069 2.3E-07 55.7 2.3 92 28-126 10-114 (293)
264 1rm4_O Glyceraldehyde 3-phosph 95.2 0.028 9.7E-07 52.6 6.5 91 31-123 2-126 (337)
265 2g6t_A Uncharacterized protein 95.2 0.057 1.9E-06 49.2 8.0 117 31-153 2-125 (306)
266 2gcg_A Glyoxylate reductase/hy 95.2 0.023 7.9E-07 52.7 5.7 64 30-98 155-221 (330)
267 3oet_A Erythronate-4-phosphate 95.2 0.0092 3.1E-07 56.9 2.9 63 30-98 119-181 (381)
268 3c85_A Putative glutathione-re 95.1 0.042 1.4E-06 45.8 6.8 108 30-147 39-161 (183)
269 2ph5_A Homospermidine synthase 95.1 0.04 1.4E-06 53.9 7.4 83 30-116 13-112 (480)
270 2axq_A Saccharopine dehydrogen 95.1 0.06 2.1E-06 52.5 8.7 106 30-143 23-140 (467)
271 3ego_A Probable 2-dehydropanto 95.1 0.022 7.6E-07 52.1 5.2 89 31-124 3-104 (307)
272 2d5c_A AROE, shikimate 5-dehyd 95.0 0.012 4.1E-07 52.5 3.1 101 32-143 118-226 (263)
273 1ygy_A PGDH, D-3-phosphoglycer 95.0 0.022 7.7E-07 56.3 5.3 72 30-106 142-216 (529)
274 3hg7_A D-isomer specific 2-hyd 95.0 0.033 1.1E-06 51.8 6.1 64 30-97 140-204 (324)
275 1id1_A Putative potassium chan 95.0 0.081 2.8E-06 42.8 7.8 108 30-147 3-127 (153)
276 3g17_A Similar to 2-dehydropan 94.9 0.011 3.6E-07 53.8 2.6 93 31-126 3-103 (294)
277 2jl1_A Triphenylmethane reduct 94.9 0.052 1.8E-06 48.0 7.0 88 31-120 1-107 (287)
278 1e6u_A GDP-fucose synthetase; 94.9 0.051 1.7E-06 48.8 7.1 86 30-120 3-107 (321)
279 2o4c_A Erythronate-4-phosphate 94.9 0.017 5.7E-07 55.1 3.9 65 29-99 115-179 (380)
280 2hk9_A Shikimate dehydrogenase 94.9 0.019 6.6E-07 51.7 4.1 68 29-100 128-199 (275)
281 1gad_O D-glyceraldehyde-3-phos 94.8 0.048 1.6E-06 50.8 6.9 90 31-122 2-122 (330)
282 3gg9_A D-3-phosphoglycerate de 94.8 0.018 6.1E-07 54.2 3.8 66 29-98 159-226 (352)
283 1xgk_A Nitrogen metabolite rep 94.8 0.061 2.1E-06 49.9 7.5 188 30-227 5-241 (352)
284 1ff9_A Saccharopine reductase; 94.8 0.071 2.4E-06 51.6 8.2 106 30-143 3-120 (450)
285 4e5n_A Thermostable phosphite 94.8 0.019 6.6E-07 53.4 3.9 84 29-117 144-233 (330)
286 1rkx_A CDP-glucose-4,6-dehydra 94.8 0.17 5.8E-06 46.2 10.3 90 30-120 9-132 (357)
287 2r6j_A Eugenol synthase 1; phe 94.8 0.084 2.9E-06 47.5 8.1 87 31-120 12-115 (318)
288 2a35_A Hypothetical protein PA 94.7 0.14 4.9E-06 42.9 9.1 88 30-120 5-114 (215)
289 3oh8_A Nucleoside-diphosphate 94.7 0.082 2.8E-06 51.7 8.4 88 30-120 147-254 (516)
290 4hy3_A Phosphoglycerate oxidor 94.7 0.034 1.2E-06 52.6 5.4 105 30-141 176-286 (365)
291 3ghy_A Ketopantoate reductase 94.7 0.041 1.4E-06 50.8 5.9 88 30-122 3-107 (335)
292 1vl0_A DTDP-4-dehydrorhamnose 94.6 0.037 1.3E-06 49.1 5.4 86 28-120 10-113 (292)
293 3rft_A Uronate dehydrogenase; 94.6 0.079 2.7E-06 46.8 7.4 87 30-120 3-111 (267)
294 2c5a_A GDP-mannose-3', 5'-epim 94.6 0.098 3.4E-06 48.6 8.3 90 29-120 28-145 (379)
295 1rpn_A GDP-mannose 4,6-dehydra 94.6 0.094 3.2E-06 47.3 8.0 92 29-120 13-138 (335)
296 3ehe_A UDP-glucose 4-epimerase 94.5 0.16 5.3E-06 45.5 9.2 87 31-120 2-114 (313)
297 2yv3_A Aspartate-semialdehyde 94.5 0.033 1.1E-06 51.9 4.7 87 31-122 1-95 (331)
298 3llv_A Exopolyphosphatase-rela 94.4 0.069 2.4E-06 42.4 6.0 106 31-146 7-124 (141)
299 3ko8_A NAD-dependent epimerase 94.4 0.14 4.8E-06 45.7 8.6 90 31-120 1-113 (312)
300 3ay3_A NAD-dependent epimerase 94.3 0.045 1.5E-06 48.1 5.2 87 31-120 3-110 (267)
301 2c20_A UDP-glucose 4-epimerase 94.3 0.13 4.5E-06 46.3 8.2 90 31-120 2-118 (330)
302 2pzm_A Putative nucleotide sug 94.1 0.12 4.2E-06 46.8 7.8 91 30-120 20-136 (330)
303 3sc6_A DTDP-4-dehydrorhamnose 94.1 0.029 1E-06 49.7 3.3 82 32-120 7-106 (287)
304 3oj0_A Glutr, glutamyl-tRNA re 94.0 0.014 4.7E-07 47.1 0.9 66 30-99 21-92 (144)
305 2ewd_A Lactate dehydrogenase,; 94.0 0.14 4.8E-06 46.9 7.9 85 29-120 3-121 (317)
306 3ojo_A CAP5O; rossmann fold, c 93.9 0.42 1.4E-05 46.1 11.4 109 30-140 11-149 (431)
307 3h2s_A Putative NADH-flavin re 93.9 0.091 3.1E-06 44.5 6.1 86 31-119 1-104 (224)
308 1eq2_A ADP-L-glycero-D-mannohe 93.9 0.12 4.1E-06 45.9 7.1 87 32-120 1-116 (310)
309 3kb6_A D-lactate dehydrogenase 93.9 0.04 1.4E-06 51.4 4.0 83 30-117 141-227 (334)
310 2q1s_A Putative nucleotide sug 93.8 0.1 3.4E-06 48.4 6.7 90 29-120 31-151 (377)
311 2pk3_A GDP-6-deoxy-D-LYXO-4-he 93.8 0.13 4.3E-06 46.2 7.1 91 28-120 10-126 (321)
312 1sb8_A WBPP; epimerase, 4-epim 93.7 0.1 3.6E-06 47.6 6.5 90 29-120 26-153 (352)
313 1y1p_A ARII, aldehyde reductas 93.7 0.22 7.4E-06 44.8 8.6 90 29-120 10-132 (342)
314 3slg_A PBGP3 protein; structur 93.7 0.18 6.2E-06 46.3 8.1 88 30-120 24-141 (372)
315 2yyy_A Glyceraldehyde-3-phosph 93.7 0.047 1.6E-06 51.2 4.1 87 31-122 3-115 (343)
316 3mog_A Probable 3-hydroxybutyr 93.6 0.032 1.1E-06 54.6 3.0 91 30-125 5-126 (483)
317 1orr_A CDP-tyvelose-2-epimeras 93.6 0.27 9.3E-06 44.3 9.1 90 31-120 2-125 (347)
318 2i99_A MU-crystallin homolog; 93.6 0.053 1.8E-06 49.8 4.2 79 29-112 134-220 (312)
319 4b8w_A GDP-L-fucose synthase; 93.5 0.21 7.2E-06 44.1 8.0 87 29-120 5-113 (319)
320 3fwz_A Inner membrane protein 93.5 0.064 2.2E-06 42.9 4.1 106 31-146 8-126 (140)
321 1t2a_A GDP-mannose 4,6 dehydra 93.5 0.29 1E-05 45.0 9.2 90 31-120 25-156 (375)
322 2gn4_A FLAA1 protein, UDP-GLCN 93.4 0.17 5.9E-06 46.5 7.4 89 30-121 21-143 (344)
323 2q1w_A Putative nucleotide sug 93.3 0.2 6.8E-06 45.5 7.6 91 30-120 21-137 (333)
324 3gpi_A NAD-dependent epimerase 93.3 0.1 3.4E-06 46.2 5.5 87 30-120 3-109 (286)
325 1jw9_B Molybdopterin biosynthe 93.0 0.34 1.2E-05 42.9 8.5 35 30-65 31-65 (249)
326 1ek6_A UDP-galactose 4-epimera 93.0 0.21 7.2E-06 45.2 7.3 90 31-120 3-132 (348)
327 1db3_A GDP-mannose 4,6-dehydra 93.0 0.42 1.4E-05 43.6 9.4 90 31-120 2-132 (372)
328 1n2s_A DTDP-4-, DTDP-glucose o 92.8 0.096 3.3E-06 46.5 4.6 85 31-120 1-104 (299)
329 2ydy_A Methionine adenosyltran 92.7 0.17 5.8E-06 45.3 6.2 89 31-120 3-110 (315)
330 2z1m_A GDP-D-mannose dehydrata 92.7 0.23 7.8E-06 44.7 7.0 91 30-120 3-127 (345)
331 2yy7_A L-threonine dehydrogena 92.6 0.13 4.6E-06 45.7 5.3 89 31-120 3-118 (312)
332 1kew_A RMLB;, DTDP-D-glucose 4 92.6 0.41 1.4E-05 43.5 8.7 89 32-120 2-133 (361)
333 3sxp_A ADP-L-glycero-D-mannohe 92.6 0.21 7.1E-06 45.8 6.7 90 29-120 9-138 (362)
334 1obf_O Glyceraldehyde 3-phosph 92.5 0.31 1.1E-05 45.5 7.8 86 31-117 2-121 (335)
335 1smk_A Malate dehydrogenase, g 92.5 0.62 2.1E-05 42.9 9.8 90 29-121 7-126 (326)
336 3k6j_A Protein F01G10.3, confi 92.4 0.25 8.5E-06 48.1 7.2 93 29-126 53-173 (460)
337 2p5y_A UDP-glucose 4-epimerase 92.4 0.24 8.3E-06 44.2 6.7 89 32-120 2-117 (311)
338 3h9e_O Glyceraldehyde-3-phosph 92.3 0.47 1.6E-05 44.4 8.7 91 28-119 5-126 (346)
339 1zud_1 Adenylyltransferase THI 92.2 0.44 1.5E-05 42.2 8.1 35 30-65 28-62 (251)
340 3ajr_A NDP-sugar epimerase; L- 92.0 0.37 1.3E-05 43.0 7.4 89 32-120 1-112 (317)
341 4dqv_A Probable peptide synthe 92.0 0.21 7.1E-06 48.3 6.1 90 28-120 71-214 (478)
342 1hyh_A L-hicdh, L-2-hydroxyiso 91.9 0.29 1E-05 44.5 6.7 82 31-117 2-119 (309)
343 3eag_A UDP-N-acetylmuramate:L- 91.9 0.4 1.4E-05 44.0 7.7 80 28-113 2-92 (326)
344 2hjr_A Malate dehydrogenase; m 91.8 0.37 1.3E-05 44.5 7.3 87 30-121 14-132 (328)
345 3c7a_A Octopine dehydrogenase; 91.7 0.35 1.2E-05 45.5 7.3 75 31-109 3-104 (404)
346 1gr0_A Inositol-3-phosphate sy 91.5 1.3 4.4E-05 41.7 10.7 94 79-201 130-228 (367)
347 1gy8_A UDP-galactose 4-epimera 91.4 0.65 2.2E-05 42.8 8.7 31 31-61 3-34 (397)
348 1zcj_A Peroxisomal bifunctiona 91.4 0.18 6.1E-06 48.9 4.9 90 30-124 37-155 (463)
349 1pzg_A LDH, lactate dehydrogen 91.2 0.53 1.8E-05 43.5 7.7 90 28-121 7-133 (331)
350 2rh8_A Anthocyanidin reductase 91.1 1.4 4.8E-05 39.5 10.4 89 30-120 9-131 (338)
351 1r6d_A TDP-glucose-4,6-dehydra 90.8 0.76 2.6E-05 41.3 8.3 88 31-120 1-127 (337)
352 1gpj_A Glutamyl-tRNA reductase 90.7 0.26 8.8E-06 46.9 5.2 66 29-97 166-237 (404)
353 1x7d_A Ornithine cyclodeaminas 90.5 0.23 7.8E-06 46.5 4.6 83 29-114 128-222 (350)
354 1leh_A Leucine dehydrogenase; 90.5 0.32 1.1E-05 45.8 5.6 105 29-146 172-283 (364)
355 2ep7_A GAPDH, glyceraldehyde-3 90.5 0.26 8.8E-06 46.2 4.9 86 31-117 3-119 (342)
356 1oc2_A DTDP-glucose 4,6-dehydr 90.5 0.48 1.6E-05 42.8 6.6 87 31-120 5-125 (348)
357 2hrz_A AGR_C_4963P, nucleoside 90.2 0.8 2.8E-05 41.2 8.0 91 29-120 13-141 (342)
358 1wdk_A Fatty oxidation complex 90.1 0.2 6.7E-06 51.4 4.0 92 29-125 313-435 (715)
359 3nzo_A UDP-N-acetylglucosamine 89.9 0.55 1.9E-05 44.2 6.7 92 30-122 35-167 (399)
360 3ce6_A Adenosylhomocysteinase; 89.8 0.25 8.5E-06 48.5 4.4 69 27-100 271-342 (494)
361 1z45_A GAL10 bifunctional prot 89.8 0.72 2.4E-05 46.5 7.9 91 30-120 11-135 (699)
362 1udb_A Epimerase, UDP-galactos 89.7 0.95 3.2E-05 40.7 8.0 89 32-120 2-124 (338)
363 1fjh_A 3alpha-hydroxysteroid d 89.7 0.68 2.3E-05 40.0 6.7 29 31-59 2-30 (257)
364 2bll_A Protein YFBG; decarboxy 89.7 1.1 3.7E-05 40.2 8.4 87 31-120 1-117 (345)
365 2x6t_A ADP-L-glycero-D-manno-h 89.6 0.42 1.4E-05 43.6 5.5 89 30-120 46-163 (357)
366 1a5z_A L-lactate dehydrogenase 89.6 0.35 1.2E-05 44.3 5.0 81 31-118 1-114 (319)
367 2b69_A UDP-glucuronate decarbo 89.5 0.9 3.1E-05 41.1 7.7 90 29-120 26-141 (343)
368 1n7h_A GDP-D-mannose-4,6-dehyd 89.4 0.35 1.2E-05 44.6 4.9 31 31-61 29-59 (381)
369 2p4h_X Vestitone reductase; NA 89.3 0.93 3.2E-05 40.3 7.6 31 31-61 2-32 (322)
370 1lld_A L-lactate dehydrogenase 89.2 0.34 1.2E-05 43.9 4.6 33 30-64 7-41 (319)
371 3l4b_C TRKA K+ channel protien 89.0 0.98 3.4E-05 38.4 7.2 87 31-120 1-100 (218)
372 2c29_D Dihydroflavonol 4-reduc 89.0 1.1 3.8E-05 40.3 7.9 89 30-120 5-128 (337)
373 2v6b_A L-LDH, L-lactate dehydr 89.0 0.82 2.8E-05 41.6 7.0 85 31-120 1-116 (304)
374 3pym_A GAPDH 3, glyceraldehyde 88.3 1.3 4.4E-05 41.2 7.8 86 31-117 2-119 (332)
375 2ggs_A 273AA long hypothetical 88.3 0.64 2.2E-05 40.3 5.6 84 32-120 2-107 (273)
376 3hja_A GAPDH, glyceraldehyde-3 88.3 0.22 7.4E-06 46.9 2.5 92 28-120 19-145 (356)
377 1omo_A Alanine dehydrogenase; 88.2 0.46 1.6E-05 43.7 4.8 78 29-113 124-212 (322)
378 3u5t_A 3-oxoacyl-[acyl-carrier 87.9 0.97 3.3E-05 39.9 6.6 102 12-122 9-115 (267)
379 2aef_A Calcium-gated potassium 87.9 0.61 2.1E-05 40.2 5.1 88 29-119 8-105 (234)
380 2dkn_A 3-alpha-hydroxysteroid 87.8 1 3.5E-05 38.5 6.5 30 31-60 2-31 (255)
381 3u62_A Shikimate dehydrogenase 87.4 0.25 8.6E-06 44.1 2.4 109 32-151 110-226 (253)
382 2wtb_A MFP2, fatty acid multif 87.4 0.53 1.8E-05 48.3 5.1 91 30-125 312-433 (725)
383 3d64_A Adenosylhomocysteinase; 87.3 0.58 2E-05 45.9 5.1 88 28-121 275-366 (494)
384 3fi9_A Malate dehydrogenase; s 87.2 0.57 2E-05 43.7 4.8 89 23-114 1-119 (343)
385 2v6g_A Progesterone 5-beta-red 87.0 0.87 3E-05 41.2 5.9 86 31-116 2-116 (364)
386 3v1y_O PP38, glyceraldehyde-3- 87.0 0.94 3.2E-05 42.2 6.0 87 30-117 3-123 (337)
387 1guz_A Malate dehydrogenase; o 86.9 1.5 5.1E-05 39.9 7.4 84 31-119 1-117 (310)
388 1o5i_A 3-oxoacyl-(acyl carrier 86.6 2.6 8.9E-05 36.5 8.6 30 29-58 18-47 (249)
389 1y6j_A L-lactate dehydrogenase 86.6 4 0.00014 37.3 10.1 87 29-120 6-123 (318)
390 1y8q_A Ubiquitin-like 1 activa 86.5 1.6 5.6E-05 40.5 7.5 116 30-151 36-162 (346)
391 4fcc_A Glutamate dehydrogenase 86.4 2.9 9.9E-05 40.4 9.3 108 29-143 234-370 (450)
392 4f6c_A AUSA reductase domain p 86.4 0.48 1.6E-05 44.6 3.8 34 28-61 67-100 (427)
393 3v2g_A 3-oxoacyl-[acyl-carrier 86.3 0.52 1.8E-05 41.8 3.8 102 12-122 9-119 (271)
394 3l9w_A Glutathione-regulated p 86.1 0.63 2.1E-05 44.4 4.5 81 30-113 4-95 (413)
395 3sju_A Keto reductase; short-c 85.9 0.61 2.1E-05 41.5 4.1 87 26-122 20-111 (279)
396 1b8p_A Protein (malate dehydro 85.8 1.6 5.4E-05 40.1 7.0 89 29-120 4-133 (329)
397 4e3z_A Putative oxidoreductase 85.5 1.4 4.9E-05 38.6 6.3 88 26-122 22-114 (272)
398 2i6t_A Ubiquitin-conjugating e 85.4 5.4 0.00019 36.2 10.3 87 30-121 14-126 (303)
399 1p3d_A UDP-N-acetylmuramate--a 85.3 8.7 0.0003 36.8 12.3 62 28-94 16-84 (475)
400 2hun_A 336AA long hypothetical 85.1 1.7 5.7E-05 38.9 6.7 88 31-120 4-127 (336)
401 1v8b_A Adenosylhomocysteinase; 85.0 0.69 2.4E-05 45.2 4.3 67 28-99 255-324 (479)
402 1t2d_A LDH-P, L-lactate dehydr 85.0 2 6.8E-05 39.4 7.2 86 30-120 4-126 (322)
403 3phh_A Shikimate dehydrogenase 84.9 2.4 8.1E-05 38.1 7.5 102 30-143 118-228 (269)
404 3q2o_A Phosphoribosylaminoimid 84.8 4.4 0.00015 37.6 9.6 80 28-112 12-99 (389)
405 3dfz_A SIRC, precorrin-2 dehyd 84.8 1.2 4.3E-05 38.9 5.4 36 28-65 29-64 (223)
406 3don_A Shikimate dehydrogenase 84.6 0.41 1.4E-05 43.4 2.3 69 29-100 116-188 (277)
407 3lk7_A UDP-N-acetylmuramoylala 84.6 1.5 5E-05 42.1 6.4 80 29-113 8-98 (451)
408 1i24_A Sulfolipid biosynthesis 84.5 2.3 7.9E-05 39.1 7.5 32 29-60 10-41 (404)
409 3doc_A Glyceraldehyde 3-phosph 84.4 1.5 5.3E-05 40.7 6.1 86 31-117 3-121 (335)
410 2vhw_A Alanine dehydrogenase; 84.2 0.33 1.1E-05 45.7 1.5 34 29-64 167-200 (377)
411 2bma_A Glutamate dehydrogenase 84.1 2.4 8.2E-05 41.2 7.6 117 29-152 251-400 (470)
412 3h5n_A MCCB protein; ubiquitin 84.1 2.3 7.8E-05 39.6 7.3 35 30-65 118-152 (353)
413 3h8v_A Ubiquitin-like modifier 84.1 1.9 6.6E-05 39.2 6.6 111 29-143 35-166 (292)
414 1ur5_A Malate dehydrogenase; o 84.0 2.3 7.9E-05 38.7 7.1 86 31-121 3-120 (309)
415 3lvf_P GAPDH 1, glyceraldehyde 83.9 2.1 7.2E-05 39.8 6.8 87 30-117 4-121 (338)
416 1y7t_A Malate dehydrogenase; N 83.6 2.7 9.2E-05 38.3 7.5 89 28-119 2-130 (327)
417 3vtf_A UDP-glucose 6-dehydroge 83.5 1.6 5.6E-05 42.1 6.1 33 27-60 18-50 (444)
418 3vot_A L-amino acid ligase, BL 83.4 12 0.00041 34.9 12.1 31 28-59 3-33 (425)
419 3n58_A Adenosylhomocysteinase; 83.4 0.67 2.3E-05 45.0 3.3 91 28-123 245-337 (464)
420 3h9u_A Adenosylhomocysteinase; 83.3 0.93 3.2E-05 43.7 4.3 82 30-117 211-295 (436)
421 3hdj_A Probable ornithine cycl 83.3 1.3 4.3E-05 40.7 5.0 78 29-113 120-208 (313)
422 1z7e_A Protein aRNA; rossmann 82.9 3.1 0.00011 41.6 8.2 89 29-120 314-432 (660)
423 3m1a_A Putative dehydrogenase; 82.8 1.8 6.2E-05 38.0 5.8 31 30-60 5-35 (281)
424 4dib_A GAPDH, glyceraldehyde 3 82.7 1.9 6.3E-05 40.3 5.9 87 30-117 4-121 (345)
425 2b4r_O Glyceraldehyde-3-phosph 82.5 3.1 0.0001 38.9 7.4 87 30-117 11-129 (345)
426 3gem_A Short chain dehydrogena 82.5 1.5 5E-05 38.6 5.0 82 28-122 25-109 (260)
427 1bgv_A Glutamate dehydrogenase 82.4 4.6 0.00016 39.0 8.8 117 29-152 229-379 (449)
428 1uzm_A 3-oxoacyl-[acyl-carrier 82.3 3.1 0.00011 35.9 7.1 30 30-59 15-44 (247)
429 4hv4_A UDP-N-acetylmuramate--L 81.9 4.3 0.00015 39.3 8.6 80 27-113 19-107 (494)
430 3pid_A UDP-glucose 6-dehydroge 81.9 1.7 5.7E-05 41.9 5.5 70 30-102 332-410 (432)
431 1npy_A Hypothetical shikimate 81.8 2.4 8E-05 38.0 6.2 105 29-143 118-233 (271)
432 2egg_A AROE, shikimate 5-dehyd 81.6 0.82 2.8E-05 41.5 3.1 69 29-100 140-217 (297)
433 2dtx_A Glucose 1-dehydrogenase 81.2 4.8 0.00017 35.1 8.0 30 30-59 8-37 (264)
434 2q2v_A Beta-D-hydroxybutyrate 81.1 4.3 0.00015 35.1 7.5 34 30-64 4-37 (255)
435 3rui_A Ubiquitin-like modifier 80.5 5.1 0.00018 37.2 8.1 110 30-144 34-169 (340)
436 3v2h_A D-beta-hydroxybutyrate 80.5 1 3.6E-05 40.0 3.3 101 11-122 9-114 (281)
437 4f6l_B AUSA reductase domain p 80.2 0.52 1.8E-05 45.6 1.3 34 28-61 148-181 (508)
438 4e2x_A TCAB9; kijanose, tetron 80.1 1.1 3.8E-05 42.0 3.5 85 28-116 317-408 (416)
439 3ids_C GAPDH, glyceraldehyde-3 80.0 1.7 5.7E-05 40.9 4.6 87 30-117 2-133 (359)
440 2fwm_X 2,3-dihydro-2,3-dihydro 79.8 6.4 0.00022 33.8 8.2 29 30-58 7-35 (250)
441 1lnq_A MTHK channels, potassiu 79.8 2.2 7.5E-05 38.8 5.3 82 30-117 115-209 (336)
442 1xg5_A ARPG836; short chain de 79.6 5.1 0.00018 35.0 7.6 31 29-59 31-61 (279)
443 3au8_A 1-deoxy-D-xylulose 5-ph 79.2 7.5 0.00026 37.6 8.9 111 27-143 74-228 (488)
444 4da9_A Short-chain dehydrogena 79.2 1.9 6.4E-05 38.3 4.6 84 30-122 29-117 (280)
445 3hp4_A GDSL-esterase; psychrot 79.1 17 0.00059 28.8 10.2 111 30-144 2-142 (185)
446 2tmg_A Protein (glutamate dehy 78.6 5 0.00017 38.4 7.6 107 29-143 208-335 (415)
447 2nm0_A Probable 3-oxacyl-(acyl 78.6 4.1 0.00014 35.5 6.6 30 30-59 21-50 (253)
448 3v8b_A Putative dehydrogenase, 78.6 4.1 0.00014 36.1 6.7 84 29-122 27-115 (283)
449 3pqe_A L-LDH, L-lactate dehydr 78.4 2.9 9.9E-05 38.6 5.7 87 29-120 4-122 (326)
450 3un1_A Probable oxidoreductase 78.4 1.9 6.5E-05 37.8 4.3 77 29-122 27-106 (260)
451 3nrc_A Enoyl-[acyl-carrier-pro 78.3 4.7 0.00016 35.4 6.9 85 28-123 24-114 (280)
452 4ffl_A PYLC; amino acid, biosy 78.3 5.1 0.00017 36.6 7.4 80 31-112 2-88 (363)
453 3bfp_A Acetyltransferase; LEFT 78.2 3.7 0.00013 34.4 5.9 69 31-113 4-73 (194)
454 2eez_A Alanine dehydrogenase; 78.1 0.98 3.4E-05 42.1 2.4 34 29-64 165-198 (369)
455 1ldn_A L-lactate dehydrogenase 78.1 5.4 0.00019 36.3 7.5 34 29-64 5-40 (316)
456 1fmc_A 7 alpha-hydroxysteroid 78.1 2 6.7E-05 36.8 4.2 34 29-63 10-43 (255)
457 2ph3_A 3-oxoacyl-[acyl carrier 78.0 3.1 0.00011 35.3 5.5 34 31-64 2-35 (245)
458 3g79_A NDP-N-acetyl-D-galactos 77.7 5.8 0.0002 38.5 7.9 67 29-100 352-427 (478)
459 3orf_A Dihydropteridine reduct 77.6 1.4 4.9E-05 38.2 3.2 51 12-63 4-54 (251)
460 4g65_A TRK system potassium up 77.4 1.5 5E-05 42.4 3.5 86 29-117 2-100 (461)
461 4dmm_A 3-oxoacyl-[acyl-carrier 77.3 1.8 6E-05 38.2 3.8 87 28-123 26-117 (269)
462 3edm_A Short chain dehydrogena 77.2 2 6.8E-05 37.5 4.1 84 29-119 7-94 (259)
463 2d4a_B Malate dehydrogenase; a 77.1 6.1 0.00021 35.9 7.4 84 32-120 1-116 (308)
464 1kyq_A Met8P, siroheme biosynt 77.0 2.4 8.2E-05 38.2 4.6 35 29-65 12-46 (274)
465 1sny_A Sniffer CG10964-PA; alp 77.0 3.2 0.00011 35.8 5.4 98 14-122 6-112 (267)
466 3orq_A N5-carboxyaminoimidazol 77.0 11 0.00038 34.8 9.4 37 27-65 9-45 (377)
467 4gx0_A TRKA domain protein; me 76.9 12 0.00041 36.5 10.0 84 31-117 349-440 (565)
468 3sc4_A Short chain dehydrogena 76.8 5.9 0.0002 35.0 7.2 89 29-122 8-103 (285)
469 3kvo_A Hydroxysteroid dehydrog 76.6 6.2 0.00021 36.3 7.5 90 29-122 44-139 (346)
470 2hq1_A Glucose/ribitol dehydro 76.5 5.8 0.0002 33.7 6.8 31 30-60 5-35 (247)
471 3jyo_A Quinate/shikimate dehyd 76.5 2.1 7.2E-05 38.6 4.1 67 29-98 126-205 (283)
472 3r3j_A Glutamate dehydrogenase 76.4 6.3 0.00021 38.1 7.6 117 29-152 238-387 (456)
473 2f00_A UDP-N-acetylmuramate--L 76.4 30 0.001 33.2 12.6 62 28-94 17-85 (491)
474 4h15_A Short chain alcohol deh 76.3 4.8 0.00016 35.6 6.4 79 23-117 4-84 (261)
475 3r1i_A Short-chain type dehydr 76.3 5.1 0.00017 35.3 6.5 85 29-122 31-119 (276)
476 2ekp_A 2-deoxy-D-gluconate 3-d 76.1 8.5 0.00029 32.7 7.8 33 31-64 3-35 (239)
477 3tjr_A Short chain dehydrogena 76.0 5.7 0.00019 35.4 6.9 84 29-122 30-118 (301)
478 2o23_A HADH2 protein; HSD17B10 75.7 6.6 0.00023 33.7 7.0 83 29-122 11-96 (265)
479 3aog_A Glutamate dehydrogenase 75.6 3.8 0.00013 39.5 5.8 107 29-143 234-360 (440)
480 3i1j_A Oxidoreductase, short c 75.6 2.3 7.9E-05 36.4 4.0 87 29-122 13-104 (247)
481 3ezl_A Acetoacetyl-COA reducta 75.4 1.9 6.4E-05 37.2 3.4 88 26-122 9-101 (256)
482 1tt5_A APPBP1, amyloid protein 75.3 4.2 0.00014 40.0 6.2 35 30-65 32-66 (531)
483 1o6z_A MDH, malate dehydrogena 75.1 5 0.00017 36.3 6.3 86 31-120 1-119 (303)
484 3o38_A Short chain dehydrogena 75.0 7.6 0.00026 33.5 7.3 86 28-122 20-111 (266)
485 3hn7_A UDP-N-acetylmuramate-L- 74.8 5.8 0.0002 38.7 7.1 82 26-113 15-106 (524)
486 3aoe_E Glutamate dehydrogenase 74.6 6.8 0.00023 37.5 7.3 107 29-143 217-339 (419)
487 3qiv_A Short-chain dehydrogena 74.5 4.6 0.00016 34.6 5.7 84 29-122 8-96 (253)
488 1sby_A Alcohol dehydrogenase; 74.2 6.1 0.00021 33.9 6.4 83 30-123 5-95 (254)
489 1x13_A NAD(P) transhydrogenase 73.7 3 0.0001 39.4 4.6 35 29-65 171-205 (401)
490 3ngx_A Bifunctional protein fo 73.7 7.3 0.00025 35.2 6.9 56 29-98 149-204 (276)
491 3d7l_A LIN1944 protein; APC893 73.6 2.4 8.3E-05 35.0 3.5 32 31-64 4-35 (202)
492 1dlj_A UDP-glucose dehydrogena 73.6 4.3 0.00015 38.3 5.6 72 29-103 308-389 (402)
493 1mld_A Malate dehydrogenase; o 73.3 12 0.0004 34.0 8.3 88 31-121 1-118 (314)
494 3md9_A Hemin-binding periplasm 73.3 38 0.0013 28.8 11.5 81 29-117 1-88 (255)
495 3gk3_A Acetoacetyl-COA reducta 73.2 2.3 8E-05 37.2 3.5 87 28-122 23-113 (269)
496 3is3_A 17BETA-hydroxysteroid d 73.0 2.4 8.2E-05 37.2 3.5 84 30-122 18-106 (270)
497 1pjq_A CYSG, siroheme synthase 73.0 6.1 0.00021 38.0 6.6 79 29-113 11-99 (457)
498 4gsl_A Ubiquitin-like modifier 72.8 8.5 0.00029 38.6 7.7 35 30-65 326-360 (615)
499 3tpc_A Short chain alcohol deh 72.8 12 0.00042 32.1 8.1 83 29-122 6-91 (257)
500 4iin_A 3-ketoacyl-acyl carrier 72.8 2.4 8.1E-05 37.2 3.4 85 29-122 28-117 (271)
No 1
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=7.7e-70 Score=509.85 Aligned_cols=288 Identities=72% Similarity=1.228 Sum_probs=261.6
Q ss_pred cccccccccccCCCcEEEEE-cCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEec
Q psy8894 17 IYAATRPNLRLTSKSKVICQ-GFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 17 ~~~~~~~~~~~~~~~~VaVv-Gasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~v 95 (306)
+|+++.|+.+++ |++++|| |+|+++|+.+.++|+++||+++++|||+..|+++.|+|+|+|++|+++++++|++++++
T Consensus 1 ~~~~~~~~~l~~-~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~v 79 (305)
T 2fp4_A 1 SYTASRKHLYVD-KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYV 79 (305)
T ss_dssp CTGGGGGGGCCC-TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECC
T ss_pred CchhhHHHHHhC-CCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEec
Confidence 488998886666 5677777 99999999999999999999888999997567899999999999999844599999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhc-CCeEEccCCCceecCccccccCCCCCCCCCCCEEEE
Q psy8894 96 PPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQS-KSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVV 174 (306)
Q Consensus 96 p~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~-gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~v 174 (306)
|++.+++++++|+++|++.+|+||+||++++..++. ++++++ |++++||||+|+++|....+++++...++||+||||
T Consensus 80 P~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~-~~a~~~~gi~liGPnc~Gii~p~~~~~~~~~~~~~~~G~va~v 158 (305)
T 2fp4_A 80 PPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVK-HRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIV 158 (305)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHH-HHHTTCSSCEEECSSSCEEEETTTEEEESSCGGGCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHH-HHHHhcCCcEEEeCCCCeEecccccceeeccccCCCCCCEEEE
Confidence 999999999999999999999999999987755554 578999 999999999999999877667777666889999999
Q ss_pred ecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC---------------CCCC
Q psy8894 175 SRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG---------------GPNA 239 (306)
Q Consensus 175 SqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~---------------~~~~ 239 (306)
||||+++.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|+++ .+++
T Consensus 159 SqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~~~~ 238 (305)
T 2fp4_A 159 SRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKS 238 (305)
T ss_dssp ESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCSTTC
T ss_pred ecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999996558999999999999999999999999984 2458
Q ss_pred CcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHHhhcCC
Q psy8894 240 KPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMKRLNLH 306 (306)
Q Consensus 240 KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~~~~~~~ 306 (306)
||||+||+|||++.|+++||||++++++.|++.+|+++|+|+|++++++++||+++++++|++.+++
T Consensus 239 KPVv~~k~G~s~~~g~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~~~~~ 305 (305)
T 2fp4_A 239 KPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKML 305 (305)
T ss_dssp CCEEEEEECTTCCTTCCCSSTTCCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHHHHHHTTCC
T ss_pred CCEEEEEecCCccccccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHhccCC
Confidence 9999999999985577899999999877789999999999999999999999999999999987763
No 2
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=3.9e-70 Score=508.20 Aligned_cols=275 Identities=53% Similarity=0.892 Sum_probs=238.0
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
+++++.++|+|+|+||++|+.+.++++++||+++++|||+..++++.|+|+|+|++|+++++++|++|+|+|++.+++++
T Consensus 2 ~~~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~ 81 (288)
T 1oi7_A 2 ILVNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAA 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHH
T ss_pred eecCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 57899999999999999999999999999999889999997667899999999999999844599999999999999999
Q ss_pred HHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCCCCCCCCCCCEEEEecChhhHHHH
Q psy8894 105 HEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEA 184 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG~~~~~~ 184 (306)
++|+++|++.+|++|+||++++.+++. ++++++|++++||||+|+++|..+.+++++...++||+||||||||+++.++
T Consensus 82 ~ea~~~Gi~~vVi~t~G~~~~~~~~l~-~~a~~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~~G~va~vsqSG~l~~~~ 160 (288)
T 1oi7_A 82 LEAAHAGIPLIVLITEGIPTLDMVRAV-EEIKALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEA 160 (288)
T ss_dssp HHHHHTTCSEEEECCSCCCHHHHHHHH-HHHHHHTCEEEESSSCEEEETTTEEEESSCGGGCCEEEEEEEESCHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHH-HHHHHcCCEEEeCCCCeEEcCCCceeEEcccCCCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999988766655 5789999999999999999998766667776678899999999999999999
Q ss_pred HHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC-----------CCCCCcEEEEEecCCCCC
Q psy8894 185 VHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG-----------GPNAKPVVSFIAGITAPP 253 (306)
Q Consensus 185 ~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~-----------~~~~KPVvvlk~Grs~~~ 253 (306)
++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|+++ ++++||||+||+|||++.
T Consensus 161 ~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~~~~KPVv~~k~G~~~~~ 240 (288)
T 1oi7_A 161 AAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHMKKPVVGFIGGRSAPK 240 (288)
T ss_dssp HHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHHHCCSCEEEEESCC----
T ss_pred HHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhcCCCCEEEEEecCCCCc
Confidence 999999999999999999994448999999999999999999999999986 247999999999999855
Q ss_pred CCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHH
Q psy8894 254 GRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEM 300 (306)
Q Consensus 254 g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~ 300 (306)
++++||||++++++.|++.+|+++|+|+|++++++++||+++++.+|
T Consensus 241 ~~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 241 GKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp --------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred cccCcchhhcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 77899999999777789999999999999999999999999999876
No 3
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=6.2e-70 Score=508.89 Aligned_cols=279 Identities=48% Similarity=0.845 Sum_probs=237.0
Q ss_pred ccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCC-CcEEEEecCchhH
Q psy8894 22 RPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATG-AEATVIYVPPPGA 100 (306)
Q Consensus 22 ~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~-iDlavi~vp~~~~ 100 (306)
.|+.++++.++++|+|+|+++|+.+.++++++||+++++|||+..|+++.|+|+|+|++|++++++ +|++|+|+|++.+
T Consensus 5 ~~~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~ 84 (297)
T 2yv2_A 5 VMAVLVDSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFA 84 (297)
T ss_dssp ----CCSTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGH
T ss_pred hhhHhhCCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHH
Confidence 477889988889999999999999999999999998899999976678999999999999998544 9999999999999
Q ss_pred HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCCCCCCCCCCCEEEEecChhh
Q psy8894 101 AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTL 180 (306)
Q Consensus 101 ~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG~~ 180 (306)
++++++|+++|++.+|++|+||++++.+++. ++|+++|++++||||+|+++|....+++++...++||+||||||||++
T Consensus 85 ~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~-~~A~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l 163 (297)
T 2yv2_A 85 PDAVYEAVDAGIRLVVVITEGIPVHDTMRFV-NYARQKGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTL 163 (297)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCCHHHHHHHH-HHHHHHTCEEECSSSCEEEETTTEEEESCCGGGCCEEEEEEEESCHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHH-HHHHHcCCEEEcCCCCeeEcccccceeecccCCCCCCCEEEEECCHHH
Confidence 9999999999999999999999988766655 578999999999999999999876666777666889999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC-----------C-CCCCcEEEEEec
Q psy8894 181 TYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG-----------G-PNAKPVVSFIAG 248 (306)
Q Consensus 181 ~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~-----------~-~~~KPVvvlk~G 248 (306)
+.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|+++ + +++||||+||+|
T Consensus 164 ~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~~~~KPVv~~k~G 243 (297)
T 2yv2_A 164 TYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGEFTKPVIAYIAG 243 (297)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTTSCCSCEEEEESC
T ss_pred HHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhccCCCCEEEEEeC
Confidence 9999999999999999999999994448899999999999999999999999986 2 689999999999
Q ss_pred CCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHH
Q psy8894 249 ITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMK 301 (306)
Q Consensus 249 rs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~~ 301 (306)
||++.++++||||++++++.|++.+|+++|+|+|++++++++||+++++++|.
T Consensus 244 ~s~~~~~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 244 RTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp CC------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred CCCccccccCCccccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 99865778999999997777899999999999999999999999999998774
No 4
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.1e-69 Score=504.57 Aligned_cols=279 Identities=49% Similarity=0.827 Sum_probs=237.4
Q ss_pred ccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 22 RPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 22 ~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
.+..++++..+++|+|+|+++|+.+.++++++||+++++|||+..++++.|+|+|+|++|+++++++|++++|+|++.++
T Consensus 5 ~l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~ 84 (294)
T 2yv1_A 5 DKMILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAK 84 (294)
T ss_dssp --CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHH
T ss_pred HHHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHHH
Confidence 35667888888899999999999999999999999889999997667899999999999999833499999999999999
Q ss_pred HHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCCCCCCCCCCCEEEEecChhhH
Q psy8894 102 KAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLT 181 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG~~~ 181 (306)
+++++|+++|++.+|++|+||++++.+++. ++||++|++++||||+|+++|....+++++...++||+||||||||+++
T Consensus 85 ~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~-~~A~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l~ 163 (294)
T 2yv1_A 85 DAVFEAIDAGIELIVVITEHIPVHDTMEFV-NYAEDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLT 163 (294)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCHHHHHHHH-HHHHHHTCEEECSSCCEEEETTTEEEECCCGGGCCEEEEEEEESCSHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHH-HHHHHcCCEEEcCCCceeeccCcceeeecccCCCCCCCEEEEECCHHHH
Confidence 999999999999989999999988766665 5789999999999999999998766666666668899999999999999
Q ss_pred HHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC----------CCCCCcEEEEEecCCC
Q psy8894 182 YEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG----------GPNAKPVVSFIAGITA 251 (306)
Q Consensus 182 ~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~----------~~~~KPVvvlk~Grs~ 251 (306)
.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|+++ .+++||||+||+|||+
T Consensus 164 ~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~~~KPVv~~k~G~~~ 243 (294)
T 2yv1_A 164 YEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEKMKKPVIGYIAGQSA 243 (294)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTTCSSCEEEEEECC--
T ss_pred HHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 999999999999999999999994448999999999999999999999999986 3479999999999998
Q ss_pred CCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHH
Q psy8894 252 PPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMK 301 (306)
Q Consensus 252 ~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~~ 301 (306)
+.++++||||++++++.|++.+|+++|+|+|++++++++||+++++++|.
T Consensus 244 ~~g~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 244 PEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp -----------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred CccccCCchhhhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 65778999999997777899999999999999999999999999998873
No 5
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=9.2e-68 Score=492.25 Aligned_cols=275 Identities=64% Similarity=1.059 Sum_probs=252.7
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
+++++.++|+|+|+||++|+.+.++++++|++++++|||+..++++.|+|+|+|++|+++++++|++++|+|++.+++++
T Consensus 2 ~~~~~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~ 81 (288)
T 2nu8_A 2 ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSI 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHH
T ss_pred eecCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 57899999999999999999999999999999999999986457889999999999999833499999999999999999
Q ss_pred HHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCCCCCCCCCCCEEEEecChhhHHHH
Q psy8894 105 HEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEA 184 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG~~~~~~ 184 (306)
++|+++|++.+|++|+||++++.+++. ++|+++|++++||||+|++||....+++++...++||+||+|||||+++.++
T Consensus 82 ~ea~~~Gi~~iVi~t~G~~~~~~~~l~-~~A~~~gv~liGPNc~Gi~~p~~~~~~~~~~~~~~~G~i~~vsqSG~l~~~~ 160 (288)
T 2nu8_A 82 LEAIDAGIKLIITITEGIPTLDMLTVK-VKLDEAGVRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEA 160 (288)
T ss_dssp HHHHHTTCSEEEECCCCCCHHHHHHHH-HHHHHHTCEEECSSCCEEEETTTEEEESSCTTSCCEEEEEEEESCHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHH-HHHHHcCCEEEecCCcceecCCcceeEecccCCCCCCCEEEEECcHHHHHHH
Confidence 999999999989899999988766665 5789999999999999999998766667776678899999999999999999
Q ss_pred HHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC-----------CCCCCcEEEEEecCCCCC
Q psy8894 185 VHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG-----------GPNAKPVVSFIAGITAPP 253 (306)
Q Consensus 185 ~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~-----------~~~~KPVvvlk~Grs~~~ 253 (306)
++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|+++ .+++||||+||+|||++.
T Consensus 161 ~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~~~~KPVv~~k~G~~~~~ 240 (288)
T 2nu8_A 161 VKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPK 240 (288)
T ss_dssp HHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHHHCCSCEEEEEECTTCCT
T ss_pred HHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhcCCCCEEEEEeCCCCcc
Confidence 999999999999999999995459999999999999999999999999986 247999999999999855
Q ss_pred CCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHH
Q psy8894 254 GRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEM 300 (306)
Q Consensus 254 g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~ 300 (306)
++++||||++++++.|++.+|+++|+|+|++++++++||+++++.+|
T Consensus 241 g~~~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 241 GKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp TCCCSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred cccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 77899999999877789999999999999999999999999999765
No 6
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=2.7e-63 Score=469.31 Aligned_cols=274 Identities=29% Similarity=0.447 Sum_probs=225.8
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHcC-------CeEEEeeCCCCCC--cee------cCeeccCCHHhhhhcC-CC
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFHSKQAIEYG-------TKVVGGVSPGKGG--KTH------LDLPVFNTVKEARDAT-GA 88 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~~~~l~~~g-------~~vv~~VnP~~~g--~~i------~Gip~y~sl~el~~~~-~i 88 (306)
.++++.++|+|.|++|+ ..+.|++++ .+++++|||+..| +++ .|+|+|+|++|+++++ ++
T Consensus 5 ~l~~~~tkviV~G~~Gk----~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~ 80 (334)
T 3mwd_B 5 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 80 (334)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred cccCCCCeEEEECCchH----HHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeCCHHHHhhcCCCC
Confidence 47899999999999866 345666654 7799999999853 444 3899999999998754 48
Q ss_pred cEEEEecCchhHHHHHHHHHH-cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccc--------c
Q psy8894 89 EATVIYVPPPGAAKAIHEALD-AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKI--------G 159 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~-~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~--------~ 159 (306)
|++|+|+|++.+.+.+.++++ +|++.++++|+||+|++.+++. ++||++|+|++||||+|++||....+ +
T Consensus 81 DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~-~~a~~~g~rliGPNc~Gii~p~~~~ig~~~~~~~a 159 (334)
T 3mwd_B 81 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLI-KKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 159 (334)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHH-HHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH-HHHHHcCCEEEccCCccccCcchhhcccccccccc
Confidence 999999999999877766666 9999999999999997766655 58999999999999999999974222 1
Q ss_pred CCCCCCCCCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC----
Q psy8894 160 IMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG---- 235 (306)
Q Consensus 160 ~~~~~~~~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~---- 235 (306)
+++...++||+||||||||+++.++++|+.++|+|||++||+||+.++|+++.|+|+||.+||+|++|+||+|..+
T Consensus 160 ~~~~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e~ 239 (334)
T 3mwd_B 160 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 239 (334)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHH
T ss_pred cccccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHHH
Confidence 3445568999999999999999999999999999999999999999999999999999999999999999966433
Q ss_pred --------CCCCCcEEEEEecCCCCC---CCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHHhh
Q psy8894 236 --------GPNAKPVVSFIAGITAPP---GRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMKRL 303 (306)
Q Consensus 236 --------~~~~KPVvvlk~Grs~~~---g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~~~~ 303 (306)
.+++||||+||+|||++. ++++|||||+++++.|++.+|+++|+|+|+++++|++||+++++.+|+.|
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~l 318 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 318 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHH
Confidence 258999999999999852 44589999999665566669999999999999999999999999999887
No 7
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=1.4e-60 Score=469.59 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=215.1
Q ss_pred cCCCcEEEEEcCCCCCChH---HHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 27 LTSKSKVICQGFTGKQGTF---HSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~---~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+.+|++|||||+|+++++. +.++|+++|...+++|||+. +++.|+|||+|++|+|+. +|++++++|++.++++
T Consensus 5 l~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~--~~i~G~~~y~sl~~lp~~--~Dlavi~vp~~~~~~~ 80 (457)
T 2csu_A 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE--EEVQGVKAYKSVKDIPDE--IDLAIIVVPKRFVKDT 80 (457)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC--SEETTEECBSSTTSCSSC--CSEEEECSCHHHHHHH
T ss_pred hcCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCC--CeECCEeccCCHHHcCCC--CCEEEEecCHHHHHHH
Confidence 4459999999999988665 46788878622567999995 899999999999999986 9999999999999999
Q ss_pred HHHHHHcCCCEEEEecCCCChhHH-----HHHHHHHHHhcCCeEEccCCCceecCccccccCCCCCCCCCCCEEEEecCh
Q psy8894 104 IHEALDAEMPLIVCITEGIPQLDM-----VKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSG 178 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf~e~~~-----~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG 178 (306)
+++|+++|+|.+|++|+||+|.+. ++.+.++|+++|++++||||+|+++|..+.+.++.+..+. |+||||||||
T Consensus 81 v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc~Gv~~~~~~~~~~~~~~~~~-G~v~~vsqSG 159 (457)
T 2csu_A 81 LIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHVDLNATFITVAKK-GNVAFISQSG 159 (457)
T ss_dssp HHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCEEEEGGGTEEEESSCCCEE-CSEEEEESCH
T ss_pred HHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCcceEEccCCCceeeecCCCCC-CCEEEEeCCH
Confidence 999999999999999999987431 3334467899999999999999999986433333333344 9999999999
Q ss_pred hhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC-----------CCCCCcEEEEEe
Q psy8894 179 TLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG-----------GPNAKPVVSFIA 247 (306)
Q Consensus 179 ~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~-----------~~~~KPVvvlk~ 247 (306)
+++.++++|+.++|+|||++||+||+ .|+++.|+|+||.+||+|++|+||+|+++ .+++||||++|+
T Consensus 160 ~~~~~~~~~~~~~g~G~s~~vs~G~~--~~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~~~~~KPVv~~k~ 237 (457)
T 2csu_A 160 ALGAGIVYKTIKEDIGFSKFISVGNM--ADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKKKPIIALKA 237 (457)
T ss_dssp HHHHHHHHHHHHTTCEESEEEECTTC--CSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCeeEEEECCCc--CCCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHHhcCCCCEEEEEc
Confidence 99999999999999999999999999 89999999999999999999999999976 247899999999
Q ss_pred cCCCCCCCC--ccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHH
Q psy8894 248 GITAPPGRR--MGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLK 298 (306)
Q Consensus 248 Grs~~~g~~--~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~ 298 (306)
|||++ |++ +||||+++ |++.+|+++|||+|++++++++||++..+.
T Consensus 238 G~~~~-g~~aa~~Htgala----g~~~~~~AafRqaGv~~v~~~~El~~~~~~ 285 (457)
T 2csu_A 238 GKSES-GARAASSHTGSLA----GSWKIYEAAFKQSGVLVANTIDEMLSMARA 285 (457)
T ss_dssp C-----------------------CHHHHHHHHHHTTCEEESSHHHHHHHHTT
T ss_pred CCCcc-ccchhhcccCccC----CcHHHHHHHHHhCCCeEECCHHHHHHHHHH
Confidence 99986 664 79999999 899999999999999999999999998764
No 8
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-59 Score=484.98 Aligned_cols=274 Identities=29% Similarity=0.445 Sum_probs=232.2
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHcC-------CeEEEeeCCCCCC--cee------cCeeccCCHHhhhhcC-CC
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFHSKQAIEYG-------TKVVGGVSPGKGG--KTH------LDLPVFNTVKEARDAT-GA 88 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~~~~l~~~g-------~~vv~~VnP~~~g--~~i------~Gip~y~sl~el~~~~-~i 88 (306)
.++++.++|+|.|++|+ ..++|+++| .+++++|||+..| .++ .|+|||+|++|+++++ ++
T Consensus 491 ~l~~~~trviV~G~tg~----~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~~~~p~~ 566 (829)
T 3pff_A 491 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 566 (829)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred eeecCCCeEEEECCcHH----HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCCcHHHHhhccCCC
Confidence 56899999999999866 677888876 5699999999863 233 4799999999998754 48
Q ss_pred cEEEEecCchhHHHHHHHHHH-cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCcccccc--------
Q psy8894 89 EATVIYVPPPGAAKAIHEALD-AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIG-------- 159 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~-~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~-------- 159 (306)
|++|+++|++.+.+++++|++ +|++.++++|+||+|.+..++. ++||++|+|++||||+|+++|....++
T Consensus 567 DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~-~~A~~~g~rliGPNc~Gii~p~~~~ig~~~g~lna 645 (829)
T 3pff_A 567 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLI-KKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 645 (829)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHH-HHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHH-HHHHHcCCEEEcCCCcccCcccccccccccccccc
Confidence 999999999999999999999 9999999999999998765554 589999999999999999999864333
Q ss_pred CCCCCCCCCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC----
Q psy8894 160 IMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG---- 235 (306)
Q Consensus 160 ~~~~~~~~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~---- 235 (306)
+++...++||+||||||||+++.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|..+
T Consensus 646 ~~~~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei~g~~f~ 725 (829)
T 3pff_A 646 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 725 (829)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHH
T ss_pred ccccccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEecCchHHH
Confidence 3444568899999999999999999999999999999999999998889999999999999999999999999443
Q ss_pred ------C--CCCCcEEEEEecCCCCC---CCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHHhh
Q psy8894 236 ------G--PNAKPVVSFIAGITAPP---GRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMKRL 303 (306)
Q Consensus 236 ------~--~~~KPVvvlk~Grs~~~---g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~~~~~~~ 303 (306)
. +++||||+||+|||++. ++++|||||+++++.|++++|+++|+|+|++|+++++||+++++.+|+.|
T Consensus 726 ~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~~~~~~~l 804 (829)
T 3pff_A 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 804 (829)
T ss_dssp HHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHH
Confidence 1 58899999999999863 56799999999766667779999999999999999999999999999887
No 9
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=2.2e-44 Score=354.31 Aligned_cols=198 Identities=21% Similarity=0.293 Sum_probs=170.2
Q ss_pred CeeccCC---HHhhhhcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCC
Q psy8894 72 DLPVFNT---VKEARDATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCP 148 (306)
Q Consensus 72 Gip~y~s---l~el~~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~ 148 (306)
++|+|++ +.++|+. +|++|+++|++.+.+++++|.++|+| ++++|+||+.++.+++. ++||++|+|++||||
T Consensus 20 ~~Pv~~~~~~~~~~p~~--~DlavI~vPa~~v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~-~~A~~~g~rliGPNc- 94 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPD--ANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLK-TRAREKGLLVMGPDC- 94 (480)
T ss_dssp CCEEESSHHHHHHHSTT--CCEEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHHHHHHH-HHHHHTTCCEECSSC-
T ss_pred CCcccchHHHHHhcCCC--CCEEEEecCHHHHHHHHHHHHhcCCC-EEEECCCCCHHHHHHHH-HHHHHcCCEEEecCc-
Confidence 5666554 5566654 99999999999999999999999999 78899999966555444 589999999999999
Q ss_pred ceecCccccccCCCCCCCCCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCC----CCCCCHHHHHHHhhcCCCc
Q psy8894 149 GIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDP----FNGTNFIDCLEVFLKDPET 224 (306)
Q Consensus 149 Gi~~~~~~~~~~~~~~~~~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~----~~dv~~~d~l~~l~~D~~t 224 (306)
|++++. +.+.++.. ..++|+||||||||+++.++++|+.++|+|||++||+||+. +.|+++.|+|+||.+||+|
T Consensus 95 G~~~~~-~~~~~f~~-~~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T 172 (480)
T 3dmy_A 95 GTSMIA-GTPLAFAN-VMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKS 172 (480)
T ss_dssp CEEEET-TEEEESCC-CCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTC
T ss_pred cccccC-CccccccC-CCCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCC
Confidence 888873 33323332 35699999999999999999999999999999999999993 4899999999999999999
Q ss_pred cEEEEEEeeCC-----------CCCCCcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHH
Q psy8894 225 KGIILIGEIGG-----------GPNAKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMG 293 (306)
Q Consensus 225 ~~I~ly~E~~~-----------~~~~KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~ 293 (306)
++|+||+|++. ++++||||++|+|||+. | |+|+|++++++++||+
T Consensus 173 ~~I~ly~E~~~e~~~~~f~~~ar~~~KPVV~~k~Grs~~----------------g--------~r~~Gvirv~~~~el~ 228 (480)
T 3dmy_A 173 EVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPA----------------V--------ARDENVWFASSLDEAA 228 (480)
T ss_dssp CEEEEEESCCCHHHHHHHHHHHHHHCSCEEEEETTCCCS----------------S--------SEETTEEEESSHHHHH
T ss_pred CEEEEEEecCCcHHHHHHHHHHHhCCCCEEEEEeCCCCc----------------c--------cccCCEEEECCHHHHH
Confidence 99999998764 25789999999999975 3 8999999999999999
Q ss_pred HHHHHHH
Q psy8894 294 NELLKEM 300 (306)
Q Consensus 294 ~~~~~~~ 300 (306)
++++++-
T Consensus 229 ~~a~~l~ 235 (480)
T 3dmy_A 229 RLACLLS 235 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998653
No 10
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.93 E-value=6.9e-27 Score=195.15 Aligned_cols=129 Identities=12% Similarity=0.192 Sum_probs=108.8
Q ss_pred cccccccccCCCcEEEEEcCCCCCChH---HHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEec
Q psy8894 19 AATRPNLRLTSKSKVICQGFTGKQGTF---HSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 19 ~~~~~~~~~~~~~~VaVvGasg~~G~~---~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~v 95 (306)
+++.+..+|++|++|||||+|.++|+. ..++|++.||+ +++|||+..++++.|+++|+|++|+++. +|++++++
T Consensus 2 ~~~~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~i~G~~~~~sl~el~~~--vDlavi~v 78 (140)
T 1iuk_A 2 NDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVASLLDLKEP--VDILDVFR 78 (140)
T ss_dssp CHHHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBSSGGGCCSC--CSEEEECS
T ss_pred CHHHHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCCCcccCcCCCEEecCCHHHCCCC--CCEEEEEe
Confidence 344555566679999999999776664 56788989998 6799999545899999999999999986 99999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCcc
Q psy8894 96 PPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQ 155 (306)
Q Consensus 96 p~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~ 155 (306)
|++.+++++++|.++|++.+|+ ++|+.++++. ++|+++|++++||||+|+++|..
T Consensus 79 p~~~~~~v~~~~~~~gi~~i~~-~~g~~~~~~~----~~a~~~Gir~vgpnc~g~~~~~~ 133 (140)
T 1iuk_A 79 PPSALMDHLPEVLALRPGLVWL-QSGIRHPEFE----KALKEAGIPVVADRCLMVEHKRL 133 (140)
T ss_dssp CHHHHTTTHHHHHHHCCSCEEE-CTTCCCHHHH----HHHHHTTCCEEESCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-cCCcCHHHHH----HHHHHcCCEEEcCCccceEChhh
Confidence 9999999999999999999885 6777554332 47899999999999999999853
No 11
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.93 E-value=7.4e-26 Score=184.75 Aligned_cols=114 Identities=11% Similarity=0.204 Sum_probs=101.0
Q ss_pred CCCcEEEEEcCCCCCChHH---HHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFH---SKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~---~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
++|++|||||+|.++++.+ .++|++.||++ +||||+. +++.|++||+|++|+|+ +|++++++|++.+++++
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V-~pVnP~~--~~i~G~~~y~sl~dlp~---vDlavi~~p~~~v~~~v 75 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHEF-IPVGRKK--GEVLGKTIINERPVIEG---VDTVTLYINPQNQLSEY 75 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCCE-EEESSSC--SEETTEECBCSCCCCTT---CCEEEECSCHHHHGGGH
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHCCCeE-EEECCCC--CcCCCeeccCChHHCCC---CCEEEEEeCHHHHHHHH
Confidence 5799999999999998876 56888889975 5999997 89999999999999996 99999999999999999
Q ss_pred HHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecC
Q psy8894 105 HEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAP 153 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~ 153 (306)
++|.++|+|.+| +++||.++++. ++||++|||++| ||+|++-.
T Consensus 76 ~e~~~~g~k~v~-~~~G~~~~e~~----~~a~~~Girvv~-nC~gv~l~ 118 (122)
T 3ff4_A 76 NYILSLKPKRVI-FNPGTENEELE----EILSENGIEPVI-GCTLVMLS 118 (122)
T ss_dssp HHHHHHCCSEEE-ECTTCCCHHHH----HHHHHTTCEEEE-SCHHHHHH
T ss_pred HHHHhcCCCEEE-ECCCCChHHHH----HHHHHcCCeEEC-CcCeEEec
Confidence 999999999866 79999765433 478999999996 99998753
No 12
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.92 E-value=1.6e-25 Score=187.57 Aligned_cols=128 Identities=15% Similarity=0.124 Sum_probs=109.1
Q ss_pred cccccccccccCCCcEEEEEcCCCCCCh---HHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEE
Q psy8894 17 IYAATRPNLRLTSKSKVICQGFTGKQGT---FHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 17 ~~~~~~~~~~~~~~~~VaVvGasg~~G~---~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi 93 (306)
.|+++.+..+|++|++|+|||+|.++|+ .+.++|++.||+ +++|||+. +++.|+++|+|++|+++. +|++++
T Consensus 9 ~m~~~~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~-v~~Vnp~~--~~i~G~~~y~sl~~l~~~--vDlvvi 83 (144)
T 2d59_A 9 GLTDEDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYD-VYPVNPKY--EEVLGRKCYPSVLDIPDK--IEVVDL 83 (144)
T ss_dssp CCCHHHHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTTC--SEETTEECBSSGGGCSSC--CSEEEE
T ss_pred CCCHHHHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCE-EEEECCCC--CeECCeeccCCHHHcCCC--CCEEEE
Confidence 3556667777777999999999966665 456788889998 56999996 889999999999999986 999999
Q ss_pred ecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCc
Q psy8894 94 YVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPE 154 (306)
Q Consensus 94 ~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~ 154 (306)
++|++.+++++++|+++|++.+| +++|+.++++. ++|+++|++++||||+|++++.
T Consensus 84 ~vp~~~~~~vv~~~~~~gi~~i~-~~~g~~~~~l~----~~a~~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 84 FVKPKLTMEYVEQAIKKGAKVVW-FQYNTYNREAS----KKADEAGLIIVANRCMMREHER 139 (144)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEE-ECTTCCCHHHH----HHHHHTTCEEEESCCHHHHHHH
T ss_pred EeCHHHHHHHHHHHHHcCCCEEE-ECCCchHHHHH----HHHHHcCCEEEcCCchhhcchh
Confidence 99999999999999999999987 57777543322 4789999999999999999874
No 13
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.92 E-value=1.1e-25 Score=188.80 Aligned_cols=129 Identities=20% Similarity=0.192 Sum_probs=108.7
Q ss_pred cccccccccCCCcEEEEEcCCCCCCh---HHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEec
Q psy8894 19 AATRPNLRLTSKSKVICQGFTGKQGT---FHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 19 ~~~~~~~~~~~~~~VaVvGasg~~G~---~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~v 95 (306)
+++.+..+|++|++|+|||+|.++|+ ...++|++.||+ +++|||+..|+++.|+++|+|++|+++. +|++++++
T Consensus 2 ~~~~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vnp~~~g~~i~G~~~~~sl~el~~~--~Dlvii~v 78 (145)
T 2duw_A 2 KENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPKVAGKTLLGQQGYATLADVPEK--VDMVDVFR 78 (145)
T ss_dssp CCCSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSSSTTSEETTEECCSSTTTCSSC--CSEEECCS
T ss_pred CHHHHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeCCcccccccCCeeccCCHHHcCCC--CCEEEEEe
Confidence 44556667777999999999966555 456788889998 5699999867889999999999999986 99999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCcc
Q psy8894 96 PPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQ 155 (306)
Q Consensus 96 p~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~ 155 (306)
|++.+++++++|+++|++.+|++++.+ +++ + .++|+++|++++||||+|+++|..
T Consensus 79 p~~~v~~v~~~~~~~g~~~i~i~~~~~-~~~---l-~~~a~~~Gi~~igpnc~g~~~~~~ 133 (145)
T 2duw_A 79 NSEAAWGVAQEAIAIGAKTLWLQLGVI-NEQ---A-AVLAREAGLSVVMDRCPAIELPRL 133 (145)
T ss_dssp CSTHHHHHHHHHHHHTCCEEECCTTCC-CHH---H-HHHHHTTTCEEECSCCHHHHSTTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCChH-HHH---H-HHHHHHcCCEEEcCCeeeEEcccc
Confidence 999999999999999999999765444 222 2 246899999999999999999964
No 14
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.91 E-value=1.8e-24 Score=180.12 Aligned_cols=120 Identities=16% Similarity=0.214 Sum_probs=99.7
Q ss_pred ccCCCcEEEEEcCCCCCChH---HHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 26 RLTSKSKVICQGFTGKQGTF---HSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~---~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
-+.+|++|+|||+|.++|+. ..++|++.||+ +++|||+. +++.|+++|+|++|+++. +|++++++|++.+++
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~-V~~vnp~~--~~i~G~~~~~s~~el~~~--vDlvii~vp~~~v~~ 84 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSKGFE-VLPVNPNY--DEIEGLKCYRSVRELPKD--VDVIVFVVPPKVGLQ 84 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTTC--SEETTEECBSSGGGSCTT--CCEEEECSCHHHHHH
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE-EEEeCCCC--CeECCeeecCCHHHhCCC--CCEEEEEeCHHHHHH
Confidence 45679999999999777665 46788889998 56999996 889999999999999986 999999999999999
Q ss_pred HHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCcc
Q psy8894 103 AIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQ 155 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~ 155 (306)
++++|+++|++.+|+++++++ +++ .++++++|++++||||+|++++..
T Consensus 85 v~~~~~~~g~~~i~~~~~~~~----~~l-~~~a~~~Gi~~igpnc~g~~~~~~ 132 (138)
T 1y81_A 85 VAKEAVEAGFKKLWFQPGAES----EEI-RRFLEKAGVEYSFGRCIMVETSNK 132 (138)
T ss_dssp HHHHHHHTTCCEEEECTTSCC----HHH-HHHHHHHTCEEECSCCHHHHC---
T ss_pred HHHHHHHcCCCEEEEcCccHH----HHH-HHHHHHCCCEEEcCCcceEEccCc
Confidence 999999999999998776652 222 246899999999999999999864
No 15
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.39 E-value=7.2e-13 Score=122.53 Aligned_cols=123 Identities=11% Similarity=0.107 Sum_probs=96.8
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC---CCce--------ecCeeccCCHHhhhhcCCCcEEE
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK---GGKT--------HLDLPVFNTVKEARDATGAEATV 92 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~---~g~~--------i~Gip~y~sl~el~~~~~iDlav 92 (306)
..+.++.||+|+|++|+||+.+.+.+.+. ++++++.++++. .|.. -.|+|+|.+++++..+ +|++|
T Consensus 16 ~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~--aDVvI 93 (288)
T 3ijp_A 16 TQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSN--TEGIL 93 (288)
T ss_dssp -----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTS--CSEEE
T ss_pred hhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcC--CCEEE
Confidence 34557889999999999999999988765 999999988753 1221 2588999999998875 99999
Q ss_pred EecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCC-Cceec
Q psy8894 93 IYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNC-PGIIA 152 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc-~Gi~~ 152 (306)
+|++|+.+.+.++.|+++|++.| +.|+||++++.+++. ++|++.+ -++.||. +|+.-
T Consensus 94 DFT~p~a~~~~~~~~l~~Gv~vV-iGTTG~~~e~~~~L~-~aa~~~~-~~~a~N~SiGv~l 151 (288)
T 3ijp_A 94 DFSQPQASVLYANYAAQKSLIHI-IGTTGFSKTEEAQIA-DFAKYTT-IVKSGNMSLGVNL 151 (288)
T ss_dssp ECSCHHHHHHHHHHHHHHTCEEE-ECCCCCCHHHHHHHH-HHHTTSE-EEECSCCCHHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCCCEE-EECCCCCHHHHHHHH-HHhCcCC-EEEECCCcHHHHH
Confidence 99999999999999999999965 579999987765544 5777755 4888986 56654
No 16
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.29 E-value=6.6e-12 Score=115.31 Aligned_cols=118 Identities=14% Similarity=0.260 Sum_probs=95.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC---CCce-------ecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK---GGKT-------HLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~---~g~~-------i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..||+|+|++|+||+.+.+.+.+. ++++++.++++. .|.. -.|+++|.+++++.++ +|++|+|++|+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--~DVVIDfT~p~ 84 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--ADYLIDFTLPE 84 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--CSEEEECSCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--CCEEEEcCCHH
Confidence 478999999999999999988775 899998888653 1211 1278999999998876 99999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCC-Cceec
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNC-PGIIA 152 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc-~Gi~~ 152 (306)
.+.+.++.|+++|++.| +.|+||++++.+++. ++|++.+ .++.||. +|+.-
T Consensus 85 a~~~~~~~al~~G~~vV-igTTG~s~~~~~~L~-~aa~~~~-vv~a~N~s~Gv~l 136 (272)
T 4f3y_A 85 GTLVHLDAALRHDVKLV-IGTTGFSEPQKAQLR-AAGEKIA-LVFSANMSVGVNV 136 (272)
T ss_dssp HHHHHHHHHHHHTCEEE-ECCCCCCHHHHHHHH-HHTTTSE-EEECSCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCEE-EECCCCCHHHHHHHH-HHhccCC-EEEECCCCHHHHH
Confidence 99999999999999965 589999988765554 5677755 4888986 56543
No 17
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=99.24 E-value=2.7e-12 Score=113.69 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=82.1
Q ss_pred cccccccccCCCcEEEEEcCCCCCChHHHHH--HHHcCCeEEEee--CCC-CCCc-eecCeeccC--CHHhhhhcCCCcE
Q psy8894 19 AATRPNLRLTSKSKVICQGFTGKQGTFHSKQ--AIEYGTKVVGGV--SPG-KGGK-THLDLPVFN--TVKEARDATGAEA 90 (306)
Q Consensus 19 ~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~--l~~~g~~vv~~V--nP~-~~g~-~i~Gip~y~--sl~el~~~~~iDl 90 (306)
+.-...+.+++.++|+|+|+ |+.|+...+. +.+.||++++.+ ||+ ..|. .+.|+|+|+ +++++.+++++|.
T Consensus 73 ~~i~~~Lg~~~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 73 NFFAEILNDHSTTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIET 151 (212)
T ss_dssp HHHHHHTTTTSCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCE
T ss_pred HHHHHHhCCCCCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCE
Confidence 33344677888999999999 9999988775 344689998885 566 6677 789999996 3444444567999
Q ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEecC
Q psy8894 91 TVIYVPPPGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 91 avi~vp~~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+++++|...++++++.|.+.||++||+||+
T Consensus 152 vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 152 AILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 999999999999999999999999999998
No 18
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.16 E-value=3.4e-11 Score=110.56 Aligned_cols=119 Identities=13% Similarity=0.214 Sum_probs=92.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCC---Cc--------eecCeeccCCHHhhhhcCCCcEEEEecC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKG---GK--------THLDLPVFNTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~---g~--------~i~Gip~y~sl~el~~~~~iDlavi~vp 96 (306)
++.+|+|+|++|+||+.+.+.+.+. ++++++.+++... +. ...+++++.+++++... +|++|+|++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~--~DvVIDft~ 81 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDD--FDVFIDFTR 81 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTS--CSEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcC--CCEEEEcCC
Confidence 4579999999999999999887754 8888877776431 11 12367788889888764 999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccC-CCceec
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPN-CPGIIA 152 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPN-c~Gi~~ 152 (306)
|+.+.+.++.|+++|++. ++.|+|+++++.+++. +++++.+ .++.|| ++|+..
T Consensus 82 p~~~~~~~~~a~~~G~~v-VigTtG~~~e~~~~L~-~~a~~~~-vv~a~N~siGvn~ 135 (273)
T 1dih_A 82 PEGTLNHLAFCRQHGKGM-VIGTTGFDEAGKQAIR-DAAADIA-IVFAANFSVGVNV 135 (273)
T ss_dssp HHHHHHHHHHHHHTTCEE-EECCCCCCHHHHHHHH-HHTTTSC-EEECSCCCHHHHH
T ss_pred hHHHHHHHHHHHhCCCCE-EEECCCCCHHHHHHHH-HhcCCCC-EEEEecCcHHHHH
Confidence 999999999999999995 5579999987755554 4566655 677888 566654
No 19
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.16 E-value=4e-11 Score=108.33 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=91.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
..||+|+|+ |+||+.+.+.+.+.+.++++.+++.. ....|+++|.+++++. + +|++|+|++|+.+.+.++ ++
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~--~~~~gv~v~~dl~~l~-~--~DVvIDft~p~a~~~~~~--l~ 74 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP--KATTPYQQYQHIADVK-G--ADVAIDFSNPNLLFPLLD--ED 74 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC--C--CCSCBCSCTTTCT-T--CSEEEECSCHHHHHHHHT--SC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc--cccCCCceeCCHHHHh-C--CCEEEEeCChHHHHHHHH--Hh
Confidence 368999999 99999999988887449988899875 3457899999999987 5 999999999999999997 88
Q ss_pred cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCC-CceecC
Q psy8894 110 AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNC-PGIIAP 153 (306)
Q Consensus 110 ~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc-~Gi~~~ 153 (306)
+|++.| +.|+|+++++.+++. ++|++.++ ++.||. +|+.-.
T Consensus 75 ~g~~vV-igTTG~s~e~~~~l~-~aa~~~~v-~~a~N~S~Gv~l~ 116 (243)
T 3qy9_A 75 FHLPLV-VATTGEKEKLLNKLD-ELSQNMPV-FFSANMSYGVHAL 116 (243)
T ss_dssp CCCCEE-ECCCSSHHHHHHHHH-HHTTTSEE-EECSSCCHHHHHH
T ss_pred cCCceE-eCCCCCCHHHHHHHH-HHHhcCCE-EEECCccHHHHHH
Confidence 999965 589999877765554 57777554 888886 566543
No 20
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.08 E-value=7.1e-10 Score=100.27 Aligned_cols=106 Identities=19% Similarity=0.266 Sum_probs=84.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
.+|+|+|++|+||+.+.+.+.+. ++++++.+++. .+++++... ++|++|+|++|+.+.+.++.|++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------------~dl~~~~~~-~~DvvIDfT~p~a~~~~~~~a~~ 67 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------------DPLSLLTDG-NTEVVIDFTHPDVVMGNLEFLID 67 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------------CCTHHHHHT-TCCEEEECSCTTTHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------------CCHHHHhcc-CCcEEEEccChHHHHHHHHHHHH
Confidence 37999999999999999888776 99999888864 236666542 49999999999999999999999
Q ss_pred cCCCEEEEecCCCChhHHHHHHHHHHHhc-CC-eEEccCC-Ccee
Q psy8894 110 AEMPLIVCITEGIPQLDMVKVKHRLIRQS-KS-RLIGPNC-PGII 151 (306)
Q Consensus 110 ~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~-gi-~iiGPNc-~Gi~ 151 (306)
+|++.|+ .|+|+++++.+++. ++|++. ++ .++.||. +|+.
T Consensus 68 ~g~~~Vi-gTTG~~~e~~~~l~-~aa~~~~~~~vv~a~N~siGv~ 110 (245)
T 1p9l_A 68 NGIHAVV-GTTGFTAERFQQVE-SWLVAKPNTSVLIAPNFAIGAV 110 (245)
T ss_dssp TTCEEEE-CCCCCCHHHHHHHH-HHHHTSTTCEEEECSCCCHHHH
T ss_pred cCCCEEE-cCCCCCHHHHHHHH-HHHHhCCCCCEEEECCccHHHH
Confidence 9999654 79999987665443 577765 76 5788884 4553
No 21
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.92 E-value=1.1e-09 Score=96.92 Aligned_cols=95 Identities=20% Similarity=0.165 Sum_probs=79.0
Q ss_pred cccccCCCcEEEEEcCCCCCChHHHHH--HHHcCCeEEEee--CCCCCCceecCeeccC--CHHhhhhcCCCcEEEEecC
Q psy8894 23 PNLRLTSKSKVICQGFTGKQGTFHSKQ--AIEYGTKVVGGV--SPGKGGKTHLDLPVFN--TVKEARDATGAEATVIYVP 96 (306)
Q Consensus 23 ~~~~~~~~~~VaVvGasg~~G~~~~~~--l~~~g~~vv~~V--nP~~~g~~i~Gip~y~--sl~el~~~~~iDlavi~vp 96 (306)
..+.+++.++|+|+|+ |++|+.+.+. ... |+++++.+ ||...|..+.|+|++. +++++.++ ++|.+++++|
T Consensus 73 ~~lg~~~~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~-~ID~ViIA~P 149 (211)
T 2dt5_A 73 HILGLNRKWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPG-RIEIALLTVP 149 (211)
T ss_dssp HHHTTTSCEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTT-TCCEEEECSC
T ss_pred HHhCcCCCCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHc-CCCEEEEeCC
Confidence 3456788899999999 9999988774 233 88888885 5666677888999854 56676666 7999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecC
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
...++++++.|.+.|++.+|+|++
T Consensus 150 s~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 150 REAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSS
T ss_pred chhHHHHHHHHHHcCCCEEEECCc
Confidence 999999999999999999999887
No 22
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.88 E-value=2.3e-09 Score=95.04 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=73.1
Q ss_pred ccccCCCcEEEEEcCCCCCChHHHHH--HHHcCCeEEEee--CCCCCCceecCeeccC--CHHhhhhcCCCcEEEEecCc
Q psy8894 24 NLRLTSKSKVICQGFTGKQGTFHSKQ--AIEYGTKVVGGV--SPGKGGKTHLDLPVFN--TVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 24 ~~~~~~~~~VaVvGasg~~G~~~~~~--l~~~g~~vv~~V--nP~~~g~~i~Gip~y~--sl~el~~~~~iDlavi~vp~ 97 (306)
.+.+++.++|+|+|+ |++|+...+. ....|+++++.+ ||...|..+.|+|++. +++++.++ . |++++++|.
T Consensus 79 ~lg~~~~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~-~-D~ViIAvPs 155 (215)
T 2vt3_A 79 TLDQDEMTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKD-E-SVAILTVPA 155 (215)
T ss_dssp HHHHC---CEEEECC-SHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSS-C-CEEEECSCH
T ss_pred HhCcCCCCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHh-C-CEEEEecCc
Confidence 456777889999999 9999998873 344589988875 5666677889999875 45666555 3 999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
..++++++.|.+.|++.+|+|++-
T Consensus 156 ~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 156 VAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHHHHHHHcCCCEEEEcCce
Confidence 999999999999999999999873
No 23
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.86 E-value=1e-08 Score=91.36 Aligned_cols=114 Identities=14% Similarity=0.186 Sum_probs=87.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHHc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALDA 110 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~~ 110 (306)
.+|+|+|+ |+||+...+.+.+.|+++++..|+....+. .|.+++++.+ .++|++++++|++.+.+.+.+++++
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~-----~~~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~ 73 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRGEHEK-----MVRGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKA 73 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCCCTT-----EESSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCcchhh-----hcCCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHC
Confidence 37999999 999999998888789998778887631111 7889999874 2499999999999999999999999
Q ss_pred CCCEEEEecCCCCh-hHHHHHHHHHHHhcCCe-EEccCCCceec
Q psy8894 111 EMPLIVCITEGIPQ-LDMVKVKHRLIRQSKSR-LIGPNCPGIIA 152 (306)
Q Consensus 111 Gi~~vvi~t~Gf~e-~~~~~~~~~~ar~~gi~-iiGPNc~Gi~~ 152 (306)
|.+ +++.+++... .+..+.+.++++++|.. ++-+|+.|-+.
T Consensus 74 G~~-vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 74 GID-LIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp TCE-EEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHH
T ss_pred CCc-EEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChH
Confidence 987 5556777643 33313334578888886 57888776554
No 24
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=98.79 E-value=1.1e-08 Score=91.17 Aligned_cols=104 Identities=18% Similarity=0.216 Sum_probs=80.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEAL 108 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~ 108 (306)
...+..|+|++||||+.+.+...+.|+++++.+++.. . +++ .+ +|++|+|+.|+.+.+.++.|.
T Consensus 11 ~~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~--~-----------~~l-~~--~DVvIDFT~P~a~~~~~~~~~ 74 (228)
T 1vm6_A 11 HHMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--V-----------EEL-DS--PDVVIDFSSPEALPKTVDLCK 74 (228)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--E-----------EEC-SC--CSEEEECSCGGGHHHHHHHHH
T ss_pred ccceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCC--c-----------ccc-cC--CCEEEECCCHHHHHHHHHHHH
Confidence 4578999999999999998766667999998888752 1 222 23 899999999999999999999
Q ss_pred HcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCC-Ccee
Q psy8894 109 DAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNC-PGII 151 (306)
Q Consensus 109 ~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc-~Gi~ 151 (306)
++|++.|+ .||||++++.+++. +++++ ---++.||. +|+.
T Consensus 75 ~~g~~~Vi-GTTG~~~~~~~~l~-~~a~~-~~vv~apNfSlGvn 115 (228)
T 1vm6_A 75 KYRAGLVL-GTTALKEEHLQMLR-ELSKE-VPVVQAYNFSIGIN 115 (228)
T ss_dssp HHTCEEEE-CCCSCCHHHHHHHH-HHTTT-SEEEECSCCCHHHH
T ss_pred HcCCCEEE-eCCCCCHHHHHHHH-HHHhh-CCEEEeccccHHHH
Confidence 99999654 89999988765443 45544 236778885 5653
No 25
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.79 E-value=2.7e-08 Score=93.11 Aligned_cols=107 Identities=20% Similarity=0.200 Sum_probs=85.6
Q ss_pred CcEEEEEcCCCCCCh-HHHHHHHHc-CCeEEEeeCCCCCCceecCeeccCCHHhhhhc-CCCcEEEEecCchhHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGT-FHSKQAIEY-GTKVVGGVSPGKGGKTHLDLPVFNTVKEARDA-TGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~-~~~~~l~~~-g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~-~~iDlavi~vp~~~~~~~~~e 106 (306)
+.||+|||+ |++|+ ...+.+.+. ++++++..++.. +..|+++|.+++++.+. .++|++++++|+..+.+.+.+
T Consensus 25 ~~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~---~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~ 100 (330)
T 4ew6_A 25 PINLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHG---TVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYK 100 (330)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSC---CCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHH
T ss_pred CceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCCh---hhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHH
Confidence 579999999 99988 678888876 889998888874 44789999999999876 579999999999999999999
Q ss_pred HHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 107 ALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
|+++|++ |++=-+ ..+.++.+++. ++|+++|+.+
T Consensus 101 al~aGkh-Vl~EKP~a~~~~e~~~l~-~~a~~~g~~~ 135 (330)
T 4ew6_A 101 ALVAGKH-VFLEKPPGATLSEVADLE-ALANKQGASL 135 (330)
T ss_dssp HHHTTCE-EEECSSSCSSHHHHHHHH-HHHHHHTCCE
T ss_pred HHHcCCc-EEEeCCCCCCHHHHHHHH-HHHHhcCCeE
Confidence 9999965 555222 33445555554 5788888744
No 26
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.76 E-value=4.3e-08 Score=92.18 Aligned_cols=116 Identities=10% Similarity=0.083 Sum_probs=89.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
+++.+|+|||+ |++|+...+.+.+. ++++++..|++.... +..|+++|.+++++.+..++|++++++|+..+.
T Consensus 11 ~~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 89 (354)
T 3q2i_A 11 DRKIRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHP 89 (354)
T ss_dssp SSCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHH
T ss_pred CCcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 46789999999 99999988888886 788888888764111 234889999999998754699999999999999
Q ss_pred HHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 102 KAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+.+.+|+++|++ +++--+ ..+.++.+++. +++++.|+.+ +|.+
T Consensus 90 ~~~~~al~~gk~-v~~EKP~a~~~~~~~~l~-~~a~~~g~~~~v~~~ 134 (354)
T 3q2i_A 90 TQSIECSEAGFH-VMTEKPMATRWEDGLEMV-KAADKAKKHLFVVKQ 134 (354)
T ss_dssp HHHHHHHHTTCE-EEECSSSCSSHHHHHHHH-HHHHHHTCCEEECCG
T ss_pred HHHHHHHHCCCC-EEEeCCCcCCHHHHHHHH-HHHHHhCCeEEEEEc
Confidence 999999999965 555333 34555655555 4788888755 4443
No 27
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.74 E-value=1.3e-07 Score=87.88 Aligned_cols=112 Identities=16% Similarity=0.163 Sum_probs=86.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc----eecCeeccCCHHhhh--------hcCCCcEEEEecC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK----THLDLPVFNTVKEAR--------DATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~--------~~~~iDlavi~vp 96 (306)
++.+|+|||+.|.+|+...+.+++.+.++++.++++.... ...+.++|.+++++. +..++|++++++|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 3579999999778999999998888999998888765321 224678999999987 4447999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+..+.+.+++|+++|++ |++=-+ ..+.++.+++. ++|+++|+.+
T Consensus 82 ~~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~ 126 (312)
T 3o9z_A 82 NHLHYPQIRMALRLGAN-ALSEKPLVLWPEEIARLK-ELEARTGRRV 126 (312)
T ss_dssp GGGHHHHHHHHHHTTCE-EEECSSSCSCHHHHHHHH-HHHHHHCCCE
T ss_pred chhhHHHHHHHHHCCCe-EEEECCCCCCHHHHHHHH-HHHHHcCCEE
Confidence 99999999999999976 554111 23445555555 5788988755
No 28
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.73 E-value=3.8e-08 Score=92.57 Aligned_cols=113 Identities=18% Similarity=0.158 Sum_probs=87.5
Q ss_pred cCCCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCCC--ceecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 27 LTSKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKGG--KTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~g--~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
+.++.+|+|||+ |.+|+. +.+.+.+. ++++++..++.... ....+.++|.+++++.+..++|++++++|+..+.+
T Consensus 4 M~~~~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 82 (352)
T 3kux_A 4 MADKIKVGLLGY-GYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFP 82 (352)
T ss_dssp TTCCEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHH
T ss_pred ccCCceEEEECC-CHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 345789999999 999985 77777776 88998888776311 23457889999999988667999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
.+.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+
T Consensus 83 ~~~~al~aGkh-V~~EKPla~~~~e~~~l~-~~a~~~g~~~ 121 (352)
T 3kux_A 83 LAQSALAAGKH-VVVDKPFTVTLSQANALK-EHADDAGLLL 121 (352)
T ss_dssp HHHHHHHTTCE-EEECSSCCSCHHHHHHHH-HHHHHTTCCE
T ss_pred HHHHHHHCCCc-EEEECCCcCCHHHHHHHH-HHHHHcCCeE
Confidence 99999999965 565333 44555666655 5788988744
No 29
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.73 E-value=2.5e-08 Score=93.75 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=89.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.++.+|+|||+ |++|+...+.+.+. ++++++..+++.... +..|++.|.+++++.+..++|++++++|+..+.+
T Consensus 3 ~~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~ 81 (354)
T 3db2_A 3 YNPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAE 81 (354)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHH
T ss_pred CCcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 45689999999 99999888888887 889888888764111 2358899999999986556999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+.+|+++|++ +++--+ ..+.++.+++. +++++.|+.+ +|.|
T Consensus 82 ~~~~al~~gk~-vl~EKP~~~~~~~~~~l~-~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 82 VIEQCARSGKH-IYVEKPISVSLDHAQRID-QVIKETGVKFLCGHS 125 (354)
T ss_dssp HHHHHHHTTCE-EEEESSSCSSHHHHHHHH-HHHHHHCCCEEEECG
T ss_pred HHHHHHHcCCE-EEEccCCCCCHHHHHHHH-HHHHHcCCeEEEeec
Confidence 99999999966 555444 45556666655 4788888644 3433
No 30
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.73 E-value=3.9e-08 Score=92.00 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=86.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
++.+|+|||+ |++|+...+.+.+. ++++++..+++.... +..|.++|.+++++.+..++|++++++|+..+.+.
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 81 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDL 81 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHH
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHH
Confidence 4579999999 99999988888886 888888888764111 23478999999999885569999999999999999
Q ss_pred HHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 104 IHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+.+|+++|++ +++--+ ..+.++..++. +++++.|+.+
T Consensus 82 ~~~al~~gk~-v~~EKP~~~~~~~~~~l~-~~a~~~g~~~ 119 (344)
T 3euw_A 82 ITRAVERGIP-ALCEKPIDLDIEMVRACK-EKIGDGASKV 119 (344)
T ss_dssp HHHHHHTTCC-EEECSCSCSCHHHHHHHH-HHHGGGGGGE
T ss_pred HHHHHHcCCc-EEEECCCCCCHHHHHHHH-HHHHhcCCeE
Confidence 9999999977 455444 45555655555 5788888643
No 31
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.67 E-value=1.8e-07 Score=87.03 Aligned_cols=115 Identities=12% Similarity=0.033 Sum_probs=85.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCee-ccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-K---THLDLP-VFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~---~i~Gip-~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |++|+...+.+.+. ++++++..+++... + +..|++ +|.+++++.+..++|++++++|+..+.+
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 4579999999 99999888888775 67888787765421 1 234776 8999999987556999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+.+|+++|++ +++=-+ ..+.++.+++. ++|++.|+.+ +|.+
T Consensus 83 ~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~-~~a~~~~~~~~v~~~ 126 (329)
T 3evn_A 83 VAKAALLAGKH-VLVEKPFTLTYDQANELF-ALAESCNLFLMEAQK 126 (329)
T ss_dssp HHHHHHHTTCE-EEEESSCCSSHHHHHHHH-HHHHHTTCCEEEECS
T ss_pred HHHHHHHCCCe-EEEccCCcCCHHHHHHHH-HHHHHcCCEEEEEEc
Confidence 99999999976 555333 33455555555 5788888744 4444
No 32
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.67 E-value=4.1e-08 Score=93.73 Aligned_cols=109 Identities=14% Similarity=0.235 Sum_probs=83.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhH-
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGA- 100 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~- 100 (306)
+++.||+|+|+ | .|+...+.+.+. ++++++.++++.... +..|+|+|.|++++.++ +|+++|++|...+
T Consensus 5 ~~~~rv~VvG~-G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~--~D~v~i~~p~~~h~ 80 (372)
T 4gmf_A 5 SPKQRVLIVGA-K-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGM--PDIACIVVRSTVAG 80 (372)
T ss_dssp --CEEEEEECS-T-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSC--CSEEEECCC--CTT
T ss_pred CCCCEEEEEeh-H-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcC--CCEEEEECCCcccc
Confidence 45789999998 7 799888887765 789998888875211 34699999999999976 9999999999877
Q ss_pred ---HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 101 ---AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 101 ---~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+++++|+++|++ |++==+ ++.++.+++. ++|+++|+.+.
T Consensus 81 ~~~~~~a~~al~aGkh-Vl~EKP-l~~~ea~~l~-~~A~~~g~~~~ 123 (372)
T 4gmf_A 81 GAGTQLARHFLARGVH-VIQEHP-LHPDDISSLQ-TLAQEQGCCYW 123 (372)
T ss_dssp SHHHHHHHHHHHTTCE-EEEESC-CCHHHHHHHH-HHHHHHTCCEE
T ss_pred hhHHHHHHHHHHcCCc-EEEecC-CCHHHHHHHH-HHHHHcCCEEE
Confidence 8999999999988 455333 5556666665 58999997543
No 33
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.66 E-value=1.3e-07 Score=88.16 Aligned_cols=115 Identities=12% Similarity=0.033 Sum_probs=87.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |++|+...+.+.+. ++++++..+++.... +..|+ ++|.+++++.+..++|++++++|+..+.+
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYS 82 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHH
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHH
Confidence 4579999999 99999999988885 888888888764211 23477 58999999987556999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+.+|+++|++ +++--+ ..+.++.+++. +++++.|+.+ +|.+
T Consensus 83 ~~~~al~~gk~-vl~EKP~~~~~~e~~~l~-~~a~~~g~~~~v~~~ 126 (330)
T 3e9m_A 83 AAKLALSQGKP-VLLEKPFTLNAAEAEELF-AIAQEQGVFLMEAQK 126 (330)
T ss_dssp HHHHHHHTTCC-EEECSSCCSSHHHHHHHH-HHHHHTTCCEEECCS
T ss_pred HHHHHHHCCCe-EEEeCCCCCCHHHHHHHH-HHHHHcCCeEEEEEh
Confidence 99999999987 454333 44555555555 5788888744 3443
No 34
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.65 E-value=6.9e-08 Score=92.07 Aligned_cols=114 Identities=15% Similarity=0.253 Sum_probs=87.4
Q ss_pred CcEEEEEcCCC-CCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 30 KSKVICQGFTG-KQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 30 ~~~VaVvGasg-~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+.+|+|||+ | .+|+...+.+.+. ++++++.++++.... +..|+++|.+++++.+..++|++++++|+..+.+.
T Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~ 80 (387)
T 3moi_A 2 KIRFGICGL-GFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEH 80 (387)
T ss_dssp CEEEEEECC-SHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHH
T ss_pred ceEEEEEeC-CHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHH
Confidence 578999999 7 8888888888876 888998888864111 23489999999999876679999999999999999
Q ss_pred HHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 104 IHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+.+|+++|++ |++--+ ..+.++.+++. ++|++.|+.+ +|.+
T Consensus 81 ~~~al~aGk~-Vl~EKP~a~~~~e~~~l~-~~a~~~g~~~~v~~~ 123 (387)
T 3moi_A 81 VVQASEQGLH-IIVEKPLTLSRDEADRMI-EAVERAGVHLVVGTS 123 (387)
T ss_dssp HHHHHHTTCE-EEECSCCCSCHHHHHHHH-HHHHHHTCCEEECCC
T ss_pred HHHHHHCCCc-eeeeCCccCCHHHHHHHH-HHHHHhCCeEEEEec
Confidence 9999999966 555333 33455555555 5788888744 4443
No 35
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.65 E-value=1.1e-07 Score=88.39 Aligned_cols=110 Identities=17% Similarity=0.240 Sum_probs=85.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
+.+|+|||+ |++|+...+.+.+. ++++++..+++... + +..|++ |.+++++.+..++|++++++|+..+.+.+
T Consensus 3 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 80 (331)
T 4hkt_A 3 TVRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLI 80 (331)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHH
Confidence 468999999 99999888888886 88888888876411 1 235888 99999998754699999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+|+++|.+ +++--+ ..+.++.+++. +++++.|+.+.
T Consensus 81 ~~al~~gk~-v~~EKP~~~~~~~~~~l~-~~a~~~g~~~~ 118 (331)
T 4hkt_A 81 ERFARAGKA-IFCEKPIDLDAERVRACL-KVVSDTKAKLM 118 (331)
T ss_dssp HHHHHTTCE-EEECSCSCSSHHHHHHHH-HHHHHTTCCEE
T ss_pred HHHHHcCCc-EEEecCCCCCHHHHHHHH-HHHHHcCCeEE
Confidence 999999965 555333 44556666655 47888887543
No 36
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.65 E-value=1e-07 Score=89.76 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=82.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH--------cCCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEEEec
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE--------YGTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~--------~g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlavi~v 95 (306)
+|-||+|||+ |.+|+.+.+.++. .++++++..+++.... +..|+ ++|.+++++.++.++|+++|++
T Consensus 24 kkirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 24 KPLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 5789999999 9999877654432 2678998888875221 23466 4999999998766799999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEEecCC---CChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 96 PPPGAAKAIHEALDAEMPLIVCITEG---IPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 96 p~~~~~~~~~e~~~~Gi~~vvi~t~G---f~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
|+..+.+.+.+|+++|++ |+| +. .+.++.+++. ++|++.|+.+ +|-|
T Consensus 103 P~~~H~~~a~~al~aGkh-Vl~--EKPla~~~~ea~~l~-~~a~~~g~~l~vg~~ 153 (393)
T 4fb5_A 103 PNQFHAEMAIAALEAGKH-VWC--EKPMAPAYADAERML-ATAERSGKVAALGYN 153 (393)
T ss_dssp CGGGHHHHHHHHHHTTCE-EEE--CSCSCSSHHHHHHHH-HHHHHSSSCEEECCG
T ss_pred ChHHHHHHHHHHHhcCCe-EEE--ccCCcccHHHHHHhh-hhHHhcCCccccccc
Confidence 999999999999999987 454 42 3344555555 5788988643 3433
No 37
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.65 E-value=7.7e-08 Score=90.42 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=84.9
Q ss_pred CcEEEEEcCCCCCCh-HHHHHHHHc-CCeEEEeeCCCCCCcee------cCeeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 30 KSKVICQGFTGKQGT-FHSKQAIEY-GTKVVGGVSPGKGGKTH------LDLPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 30 ~~~VaVvGasg~~G~-~~~~~l~~~-g~~vv~~VnP~~~g~~i------~Gip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
+.+|+|||+ |.+|+ .+.+.+.+. ++++++.++++. .++. .++++|.+++++.+..++|++++++|+..+.
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 2 TVKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLHV-NEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp CEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTTC-CHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCCH-HHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 368999999 98887 567777665 889998999873 3433 5889999999998866799999999999999
Q ss_pred HHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 102 KAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+.+.+|+++|++ |++=-+ ..+.++.+++. ++|+++|+.+
T Consensus 80 ~~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~-~~a~~~g~~~ 119 (349)
T 3i23_A 80 DLAKQAILAGKS-VIVEKPFCDTLEHAEELF-ALGQEKGVVV 119 (349)
T ss_dssp HHHHHHHHTTCE-EEECSCSCSSHHHHHHHH-HHHHHTTCCE
T ss_pred HHHHHHHHcCCE-EEEECCCcCCHHHHHHHH-HHHHHcCCeE
Confidence 999999999965 555233 33455555555 5788988754
No 38
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.64 E-value=1.2e-07 Score=89.46 Aligned_cols=115 Identities=17% Similarity=0.297 Sum_probs=87.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
++.+|+|||+ |.+|+...+.+.+. ++++++.++++.... +..|+++|.+++++.+..++|++++++|+..+.+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 4 KKYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CcCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4579999999 99999888888876 888888878764111 235889999999998755699999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+|+++|.+ |++=-+ ..+.++.+++. ++|++.|+.+ +|-|
T Consensus 83 ~~al~aGkh-Vl~EKP~a~~~~ea~~l~-~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 83 ISALEAGKH-VVCEKPVTMTSEDLLAIM-DVAKRVNKHFMVHQN 124 (359)
T ss_dssp HHHHHTTCE-EEEESSCCSSHHHHHHHH-HHHHHHTCCEEEECG
T ss_pred HHHHHCCCC-EEeeCCCcCCHHHHHHHH-HHHHHhCCeEEEEee
Confidence 999999966 555333 34455555555 5788888744 3433
No 39
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.63 E-value=2.5e-07 Score=87.51 Aligned_cols=121 Identities=8% Similarity=0.077 Sum_probs=82.8
Q ss_pred cccccccccccccccCCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCCc----eecC-eeccCCHHhhhhcC
Q psy8894 13 VAEEIYAATRPNLRLTSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGGK----THLD-LPVFNTVKEARDAT 86 (306)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g~----~i~G-ip~y~sl~el~~~~ 86 (306)
+.+++|.++ .++.+|+|||+ |..+.. ..+.+...++++++..++..... +..| .++|.+++++.+..
T Consensus 15 ~~~~~~~~M------m~~irvgiiG~-G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 15 TENLYFQSM------MDELRFAAVGL-NHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDE 87 (361)
T ss_dssp -----------------CCEEEEECC-CSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCT
T ss_pred Cccchhhhh------ccCcEEEEECc-CHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCC
Confidence 345556443 24689999999 888854 45566667999998888864111 1233 68999999998866
Q ss_pred CCcEEEEecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 87 GAEATVIYVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 87 ~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
++|++++++|+..+.+.+.+|+++|++ |++==+ ..+.++.+++. ++|++.|+.+
T Consensus 88 ~vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~l 142 (361)
T 3u3x_A 88 NIGLIVSAAVSSERAELAIRAMQHGKD-VLVDKPGMTSFDQLAKLR-RVQAETGRIF 142 (361)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCE-EEEESCSCSSHHHHHHHH-HHHHTTCCCE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCe-EEEeCCCCCCHHHHHHHH-HHHHHcCCEE
Confidence 799999999999999999999999976 555223 33445555555 5788888754
No 40
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.63 E-value=1.1e-07 Score=89.79 Aligned_cols=110 Identities=18% Similarity=0.221 Sum_probs=85.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHH-Hc-CCeEEEeeCCCCCCc----eecC--eeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAI-EY-GTKVVGGVSPGKGGK----THLD--LPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~-~~-g~~vv~~VnP~~~g~----~i~G--ip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
+.+|+|||+ |++|+...+.+. +. ++++++..++..... +..| .+.|.+++++.+..++|++++++|+..+.
T Consensus 23 ~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 101 (357)
T 3ec7_A 23 TLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHA 101 (357)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred eeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 579999999 999998888888 43 889888888765211 1235 68999999998765699999999999999
Q ss_pred HHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 102 KAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+.+.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+++
T Consensus 102 ~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~-~~a~~~g~~~ 141 (357)
T 3ec7_A 102 DVAVAALNANKY-VFCEKPLAVTAADCQRVI-EAEQKNGKRM 141 (357)
T ss_dssp HHHHHHHHTTCE-EEEESSSCSSHHHHHHHH-HHHHHHTSCC
T ss_pred HHHHHHHHCCCC-EEeecCccCCHHHHHHHH-HHHHHhCCeE
Confidence 999999999965 565444 44555656655 4788999765
No 41
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.63 E-value=7.1e-08 Score=90.83 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=86.4
Q ss_pred CCcEEEEEcCCCCCCh-HHHHHHHHc-CCeEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGT-FHSKQAIEY-GTKVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~-~~~~~l~~~-g~~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |++|+ ...+.+.+. ++++++..+++... + +..|++.|.+++++.+..++|++++++|+..+.+
T Consensus 26 ~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 104 (350)
T 3rc1_A 26 NPIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAE 104 (350)
T ss_dssp CCEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHH
T ss_pred CceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 3579999999 99998 577888877 88888888876311 1 2358999999999987556999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+.
T Consensus 105 ~~~~al~aGk~-Vl~EKP~a~~~~ea~~l~-~~a~~~g~~~~ 144 (350)
T 3rc1_A 105 WIDRALRAGKH-VLAEKPLTTDRPQAERLF-AVARERGLLLM 144 (350)
T ss_dssp HHHHHHHTTCE-EEEESSSCSSHHHHHHHH-HHHHHTTCCEE
T ss_pred HHHHHHHCCCc-EEEeCCCCCCHHHHHHHH-HHHHHhCCEEE
Confidence 99999999977 555333 44555656655 57888887543
No 42
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.63 E-value=8.4e-08 Score=90.60 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=87.8
Q ss_pred CCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCC--CceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKG--GKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~--g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
++.+|+|||+ |++|+. +.+.+.+. ++++++.++++.. .++..+.++|.+++++.+..++|++++++|+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (362)
T 3fhl_A 4 EIIKTGLAAF-GMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYA 82 (362)
T ss_dssp CCEEEEESCC-SHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred CceEEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 4679999999 999885 67777776 8899888777642 12234789999999998866799999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+ +|.|
T Consensus 83 ~~al~aGkh-Vl~EKP~a~~~~ea~~l~-~~a~~~g~~~~v~~~ 124 (362)
T 3fhl_A 83 GMALEAGKN-VVVEKPFTSTTKQGEELI-ALAKKKGLMLSVYQN 124 (362)
T ss_dssp HHHHHTTCE-EEEESSCCSSHHHHHHHH-HHHHHHTCCEEEECG
T ss_pred HHHHHCCCe-EEEecCCCCCHHHHHHHH-HHHHHcCCEEEEEec
Confidence 999999976 555333 34555666655 5788888754 3444
No 43
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.63 E-value=7.1e-08 Score=90.27 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=83.4
Q ss_pred cccCCCcEEEEEcCCCCCChHH-HHHHHHc-CCeEEEeeCCCCCC-c---eecCee-ccCCHHhhhhcCCCcEEEEecCc
Q psy8894 25 LRLTSKSKVICQGFTGKQGTFH-SKQAIEY-GTKVVGGVSPGKGG-K---THLDLP-VFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 25 ~~~~~~~~VaVvGasg~~G~~~-~~~l~~~-g~~vv~~VnP~~~g-~---~i~Gip-~y~sl~el~~~~~iDlavi~vp~ 97 (306)
+.+.+..||+|||+ |++|+.. .+.+++. ++++++..+++... + +-.|++ +|.|++++.+..++|+++|++|+
T Consensus 18 ~~~~~mirigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 18 LYFQSMLRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp ----CCEEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred ccccCccEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 44566789999999 9888764 5677775 88899888886411 1 234764 89999999876679999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
..+.+.+.+|+++|++ |+|==| ..+.++.+++. ++|++.|+.+
T Consensus 97 ~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~~~~l 140 (350)
T 4had_A 97 SQHIEWSIKAADAGKH-VVCEKPLALKAGDIDAVI-AARDRNKVVV 140 (350)
T ss_dssp GGHHHHHHHHHHTTCE-EEECSCCCSSGGGGHHHH-HHHHHHTCCE
T ss_pred chhHHHHHHHHhcCCE-EEEeCCcccchhhHHHHH-HHHHHcCCce
Confidence 9999999999999976 555111 23444555555 4788888644
No 44
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.62 E-value=3.9e-07 Score=84.83 Aligned_cols=111 Identities=15% Similarity=0.108 Sum_probs=85.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc----eecCeeccCCHHhhhh---------cCCCcEEEEecC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK----THLDLPVFNTVKEARD---------ATGAEATVIYVP 96 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~---------~~~iDlavi~vp 96 (306)
+.+|+|||+.|.+|+...+.+.+.+.++++.++++.... ...+.++|.+++++.+ ..++|++++++|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 579999999778999999998888999998888765221 1237789999999872 346999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+..+.+.+.+|+++|++ |++=-+ ..+.++.+++. ++++++|+.+
T Consensus 83 ~~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~ 127 (318)
T 3oa2_A 83 NYLHYPHIAAGLRLGCD-VICEKPLVPTPEMLDQLA-VIERETDKRL 127 (318)
T ss_dssp GGGHHHHHHHHHHTTCE-EEECSSCCSCHHHHHHHH-HHHHHHTCCE
T ss_pred cHHHHHHHHHHHHCCCe-EEEECCCcCCHHHHHHHH-HHHHHhCCEE
Confidence 99999999999999976 555222 33445555555 5788888754
No 45
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.61 E-value=1.7e-07 Score=88.60 Aligned_cols=116 Identities=17% Similarity=0.162 Sum_probs=86.9
Q ss_pred CCCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCC--CceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKG--GKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~--g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+++.+|+|||+ |++|+. +.+.+.+. ++++++..+++.. .....+.++|.+++++.+..++|++++++|+..+.+.
T Consensus 5 ~~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~ 83 (364)
T 3e82_A 5 NNTINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL 83 (364)
T ss_dssp --CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH
T ss_pred CCcceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 45689999999 999985 67777776 8899888887641 0123478999999999885569999999999999999
Q ss_pred HHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 104 IHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+.+|+++|++ |++--+ ..+.++.+++. ++|++.|+.+ +|.|
T Consensus 84 ~~~al~aGk~-Vl~EKPla~~~~e~~~l~-~~a~~~g~~~~v~~~ 126 (364)
T 3e82_A 84 ARLALNAGKH-VVVDKPFTLDMQEARELI-ALAEEKQRLLSVFHN 126 (364)
T ss_dssp HHHHHHTTCE-EEECSCSCSSHHHHHHHH-HHHHHTTCCEEECCC
T ss_pred HHHHHHCCCc-EEEeCCCcCCHHHHHHHH-HHHHHhCCeEEEEee
Confidence 9999999966 555333 34455555555 5788998754 3443
No 46
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.60 E-value=2e-07 Score=86.15 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-cee-cCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-KTH-LDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~~i-~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
+++.+|+|||+ |++|+...+.+.+. ++++++..+++... ++. ..+++|.+++++.+..++|++++++|+..+.+.+
T Consensus 8 ~~~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 86 (315)
T 3c1a_A 8 NSPVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEIT 86 (315)
T ss_dssp -CCEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHHH
T ss_pred CCcceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHHH
Confidence 34579999999 99999998888886 78888787765310 111 1167899999998644599999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCe-EEccC
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSR-LIGPN 146 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~-iiGPN 146 (306)
.+|+++|.+ +++--+ ..+.++..++. +++++.|+. .+|.+
T Consensus 87 ~~al~~Gk~-v~~eKP~~~~~~~~~~l~-~~a~~~g~~~~~~~~ 128 (315)
T 3c1a_A 87 LAAIASGKA-VLVEKPLTLDLAEAEAVA-AAAKATGVMVWVEHT 128 (315)
T ss_dssp HHHHHTTCE-EEEESSSCSCHHHHHHHH-HHHHHHCCCEEEECG
T ss_pred HHHHHCCCc-EEEcCCCcCCHHHHHHHH-HHHHHcCCEEEEeec
Confidence 999999965 555333 34555555554 578888864 44444
No 47
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.60 E-value=2.1e-07 Score=90.40 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=86.4
Q ss_pred CCcEEEEEcC---CCCCChHHHHHHHHc--CCeEEEeeCCCCCCc----eecCee---ccCCHHhhhhcCCCcEEEEecC
Q psy8894 29 SKSKVICQGF---TGKQGTFHSKQAIEY--GTKVVGGVSPGKGGK----THLDLP---VFNTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGa---sg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~----~i~Gip---~y~sl~el~~~~~iDlavi~vp 96 (306)
++.+|+|||+ .|.+|+.+.+.+++. ++++++..++..... +..|++ +|.+++++.+..++|++++++|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 5689999999 489999999888886 788988888764111 124665 8999999987556999999999
Q ss_pred chhHHHHHHHHHHcCC-----CEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 97 PPGAAKAIHEALDAEM-----PLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi-----~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+..+.+.+.+|+++|. |.|++=-+ ..+.++.+++. ++|++.|+.+
T Consensus 99 ~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~-~~a~~~g~~~ 149 (438)
T 3btv_A 99 VASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIY-KAAAERGVQT 149 (438)
T ss_dssp HHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHH-HHHHTTTCEE
T ss_pred cHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHH-HHHHHcCCeE
Confidence 9999999999999993 56776332 33455555555 5788888754
No 48
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.58 E-value=2.1e-07 Score=87.71 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=85.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-c---eecC----eeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-K---THLD----LPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~---~i~G----ip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
+++.+|+|||+ |++|+...+.+.+. ++++++..+++... + +..| .++|.+++++.+..++|++++++|+.
T Consensus 4 ~~~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 4 ETQIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp --CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred CCceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH
Confidence 35679999999 99999888888875 78888888876411 1 1224 57899999998654699999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE-ccC
Q psy8894 99 GAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI-GPN 146 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii-GPN 146 (306)
.+.+.+.+|+++|++ |++--+ ..+.++.+++. ++|++.|+.+. |.+
T Consensus 83 ~h~~~~~~al~aGk~-V~~EKP~a~~~~e~~~l~-~~a~~~g~~~~~~~~ 130 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKH-ILLEKPVAMNVTEFDKIV-DACEANGVQIMDGTM 130 (362)
T ss_dssp GHHHHHHHHHTTTCE-EEECSSCSSSHHHHHHHH-HHHHTTTCCEEECCC
T ss_pred HHHHHHHHHHHCCCe-EEEecCCcCCHHHHHHHH-HHHHHcCCEEEEEEe
Confidence 999999999999976 555332 34455555554 57899997543 443
No 49
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.58 E-value=3.1e-07 Score=84.45 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=84.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHH----cCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIE----YGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~----~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+++.+|+|||+ |.+|+...+.+.+ .++++++..+++.. .+..|++ |.+++++.+..++|++++++|+..+.+.
T Consensus 5 ~~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~ 81 (294)
T 1lc0_A 5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-GSLDEVR-QISLEDALRSQEIDVAYICSESSSHEDY 81 (294)
T ss_dssp CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-CEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHH
T ss_pred CCcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchHH-HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHH
Confidence 34679999999 9999988777654 37788888887542 3456777 7899999875569999999999999999
Q ss_pred HHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 104 IHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+.+|+++|++ |++=-+ ..+.++.+++. ++++++|+.+ +|++
T Consensus 82 ~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~~~~~~ 124 (294)
T 1lc0_A 82 IRQFLQAGKH-VLVEYPMTLSFAAAQELW-ELAAQKGRVLHEEHV 124 (294)
T ss_dssp HHHHHHTTCE-EEEESCSCSCHHHHHHHH-HHHHHTTCCEEEECG
T ss_pred HHHHHHCCCc-EEEeCCCCCCHHHHHHHH-HHHHHhCCEEEEEEh
Confidence 9999999986 555222 22344555554 5788888753 3444
No 50
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.57 E-value=1.5e-07 Score=87.99 Aligned_cols=109 Identities=11% Similarity=0.184 Sum_probs=84.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCee-ccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLP-VFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip-~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
.+|+|||+ |++|+...+.+.+. ++++++..+++.... +..|++ +|.+++++.+..++|++++++|+..+.+.+
T Consensus 3 ~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 81 (344)
T 3ezy_A 3 LRIGVIGL-GRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV 81 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH
Confidence 58999999 99999888888775 788888888764111 234664 899999998855699999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
.+|+++|++ +++--+ ..+.++.+++. +++++.|+.+
T Consensus 82 ~~al~~gk~-v~~EKP~~~~~~e~~~l~-~~a~~~g~~~ 118 (344)
T 3ezy_A 82 IACAKAKKH-VFCEKPLSLNLADVDRMI-EETKKADVIL 118 (344)
T ss_dssp HHHHHTTCE-EEEESCSCSCHHHHHHHH-HHHHHHTCCE
T ss_pred HHHHhcCCe-EEEECCCCCCHHHHHHHH-HHHHHhCCcE
Confidence 999999966 555444 55566666655 4788888644
No 51
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.57 E-value=1.5e-07 Score=88.06 Aligned_cols=110 Identities=13% Similarity=0.202 Sum_probs=85.3
Q ss_pred cEEEEEcCCCCCChHHHHHHH-Hc-CCeEEEeeCCCCCC-c---eecC--eeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAI-EY-GTKVVGGVSPGKGG-K---THLD--LPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~-~~-g~~vv~~VnP~~~g-~---~i~G--ip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.+|+|||+ |++|+...+.+. +. ++++++..+++... + +..| .+.|.+++++.+..++|++++++|+..+.+
T Consensus 3 ~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (344)
T 3mz0_A 3 LRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHES 81 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred EEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHH
Confidence 68999999 999999888888 53 88888888886411 1 2246 689999999987657999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+|+++|++ +++=-+ ..+.++.+++. ++|++.|+.++
T Consensus 82 ~~~~al~~Gk~-vl~EKP~a~~~~e~~~l~-~~a~~~g~~~~ 121 (344)
T 3mz0_A 82 SVLKAIKAQKY-VFCEKPLATTAEGCMRIV-EEEIKVGKRLV 121 (344)
T ss_dssp HHHHHHHTTCE-EEECSCSCSSHHHHHHHH-HHHHHHSSCCE
T ss_pred HHHHHHHCCCc-EEEcCCCCCCHHHHHHHH-HHHHHHCCEEE
Confidence 99999999965 555333 44555666655 57889998653
No 52
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.57 E-value=2.2e-07 Score=86.97 Aligned_cols=114 Identities=16% Similarity=0.137 Sum_probs=85.3
Q ss_pred cCCCcEEEEEcCCC-CCChHHHHHHHHc--CCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEEEecCch
Q psy8894 27 LTSKSKVICQGFTG-KQGTFHSKQAIEY--GTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 27 ~~~~~~VaVvGasg-~~G~~~~~~l~~~--g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
-+++.+|+|||+ | .+|+...+.+.+. ++++++..+++.... +..|+ ++|.+++++.+..++|++++++|+.
T Consensus 15 ~~~~irvgiIG~-G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 15 PLRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp -CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred CCCceeEEEEec-CHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 456789999999 7 7888888888775 678888888764111 12365 7999999998765699999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 99 GAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+.+.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+.
T Consensus 94 ~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~~ 137 (340)
T 1zh8_A 94 LNLPFIEKALRKGVH-VICEKPISTDVETGKKVV-ELSEKSEKTVY 137 (340)
T ss_dssp GHHHHHHHHHHTTCE-EEEESSSSSSHHHHHHHH-HHHHHCSSCEE
T ss_pred HHHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHH-HHHHHcCCeEE
Confidence 999999999999975 565333 23445555554 57888887443
No 53
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.56 E-value=6.4e-07 Score=83.40 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=82.1
Q ss_pred CCcEEEEEcCCCCCCh-HHHHHHHHcCCeEEEeeCCCCCCc-----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGT-FHSKQAIEYGTKVVGGVSPGKGGK-----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~-~~~~~l~~~g~~vv~~VnP~~~g~-----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |+++. ...+.+...++++++..+++.... +..+.++|.+++++.+..++|++++++|+..+.+
T Consensus 3 ~~~rvgiiG~-G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (336)
T 2p2s_A 3 KKIRFAAIGL-AHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE 81 (336)
T ss_dssp -CCEEEEECC-SSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CccEEEEECC-ChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH
Confidence 3579999999 88875 345666666999888877764211 1226789999999987556999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+|+++|.+ |++=-+ ..+.++.+++. ++|++.|+.+.
T Consensus 82 ~~~~al~aGkh-Vl~EKP~a~~~~e~~~l~-~~a~~~g~~~~ 121 (336)
T 2p2s_A 82 LALRTLDAGKD-FFTAKPPLTTLEQLDAVQ-RRVAETGRKFA 121 (336)
T ss_dssp HHHHHHHTTCE-EEECSSCCSCHHHHHHHH-HHHHHHCCCEE
T ss_pred HHHHHHHCCCc-EEEeCCCCCCHHHHHHHH-HHHHHcCCEEE
Confidence 99999999976 555222 23444555554 57888887554
No 54
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.56 E-value=3.2e-07 Score=84.85 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=82.4
Q ss_pred CCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |++|+. ..+.+.+. ++++++.++++.... +..|+++|.+++++.. ++|++++++|+..+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~--~~D~V~i~tp~~~h~~ 80 (319)
T 1tlt_A 4 KKLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAA--SCDAVFVHSSTASHFD 80 (319)
T ss_dssp -CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHT--TCSEEEECSCTTHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhc--CCCEEEEeCCchhHHH
Confidence 3579999999 999986 77777764 788888887765211 1247888999998833 5999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+|+++|++ +++--+ ..+.++.+++. ++|++.|+.+.
T Consensus 81 ~~~~al~~G~~-v~~eKP~~~~~~~~~~l~-~~a~~~g~~~~ 120 (319)
T 1tlt_A 81 VVSTLLNAGVH-VCVDKPLAENLRDAERLV-ELAARKKLTLM 120 (319)
T ss_dssp HHHHHHHTTCE-EEEESSSCSSHHHHHHHH-HHHHHTTCCEE
T ss_pred HHHHHHHcCCe-EEEeCCCCCCHHHHHHHH-HHHHHcCCeEE
Confidence 99999999976 454333 44555555555 57888887553
No 55
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.56 E-value=1.5e-07 Score=88.74 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=86.8
Q ss_pred CCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCCC--ceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKGG--KTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~g--~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
++.+|+|||+ |++|+. +.+.+.+. ++++++..++.... .+..+.++|.+++++.+..++|++++++|+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (358)
T 3gdo_A 4 DTIKVGILGY-GLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT 82 (358)
T ss_dssp TCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4679999999 998885 67777766 88998888876411 1234789999999998855699999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
..|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+ +|.|
T Consensus 83 ~~al~aGkh-Vl~EKPla~~~~e~~~l~-~~a~~~g~~~~v~~~ 124 (358)
T 3gdo_A 83 MACIQAGKH-VVMEKPMTATAEEGETLK-RAADEKGVLLSVYHN 124 (358)
T ss_dssp HHHHHTTCE-EEEESSCCSSHHHHHHHH-HHHHHHTCCEEEECG
T ss_pred HHHHHcCCe-EEEecCCcCCHHHHHHHH-HHHHHcCCeEEEeee
Confidence 999999965 555333 34455556655 5788888744 3443
No 56
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.55 E-value=1.5e-07 Score=90.18 Aligned_cols=117 Identities=11% Similarity=0.130 Sum_probs=85.4
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHc---------CCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEE
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEY---------GTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATV 92 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~---------g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlav 92 (306)
++++.||+|||+ |.+|+.+.+.+++. +.++++..+++.... +..|+ ++|.+++++.+..++|+++
T Consensus 23 Ms~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~ 101 (412)
T 4gqa_A 23 MSARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVD 101 (412)
T ss_dssp --CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEE
T ss_pred ccccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEE
Confidence 455689999999 99999887777653 457888888864111 23455 5999999998766799999
Q ss_pred EecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCC-eEEccC
Q psy8894 93 IYVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKS-RLIGPN 146 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi-~iiGPN 146 (306)
|++|+..+.+.+.+|+++|++ |+|==+ ..+.++.+++. ++|++.|+ -.+|-|
T Consensus 102 I~tp~~~H~~~~~~al~aGkh-Vl~EKP~a~~~~ea~~l~-~~a~~~g~~~~v~~~ 155 (412)
T 4gqa_A 102 ITSPNHLHYTMAMAAIAAGKH-VYCEKPLAVNEQQAQEMA-QAARRAGVKTMVAFN 155 (412)
T ss_dssp ECSCGGGHHHHHHHHHHTTCE-EEEESCSCSSHHHHHHHH-HHHHHHTCCEEEECG
T ss_pred ECCCcHHHHHHHHHHHHcCCC-eEeecCCcCCHHHHHHHH-HHHHHhCCeeeeccc
Confidence 999999999999999999976 555222 23445555555 47888886 444544
No 57
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.55 E-value=9.3e-08 Score=89.22 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=83.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCcee-cCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTH-LDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i-~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
++.||+|+|+ |++|+.+.+.+.+. ++++++.++++... .. .|+++|.+++++.. ++|++++++|+..+.+.+..
T Consensus 2 ~~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~~gv~~~~d~~~ll~--~~DvViiatp~~~h~~~~~~ 77 (320)
T 1f06_A 2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTKTPVFDVADVDKHAD--DVDVLFLCMGSATDIPEQAP 77 (320)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSSSCEEEGGGGGGTTT--TCSEEEECSCTTTHHHHHHH
T ss_pred CCCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhcCCCceeCCHHHHhc--CCCEEEEcCCcHHHHHHHHH
Confidence 3578999998 99999999888876 78888887776321 11 37888999998873 49999999999999999999
Q ss_pred HHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcC-CeEEccC
Q psy8894 107 ALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSK-SRLIGPN 146 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~g-i~iiGPN 146 (306)
++++|++. ++-++ +.+.++..+.+.+++++.+ +.+++.+
T Consensus 78 al~aG~~V-v~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~ 118 (320)
T 1f06_A 78 KFAQFACT-VDTYDNHRDIPRHRQVMNEAATAAGNVALVSTG 118 (320)
T ss_dssp HHTTTSEE-ECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCS
T ss_pred HHHCCCEE-EECCCCcCCHHHHHHHHHHHHHhCCCEEEEecC
Confidence 99999874 44444 4444555233345677766 4555544
No 58
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.55 E-value=1.9e-07 Score=87.56 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=82.1
Q ss_pred CcEEEEEcCCCCCChH-HHH-HHHHc-CCeEEEeeCCCCCC----ceecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 30 KSKVICQGFTGKQGTF-HSK-QAIEY-GTKVVGGVSPGKGG----KTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~-~~~-~l~~~-g~~vv~~VnP~~~g----~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
+.+|+|||+ |++|+. +.+ .+... ++++++.+++.... .+..+.++|.+++++.+..++|++++++|+..+.+
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 2 VINCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp CEEEEEECC-SHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHH
T ss_pred ceEEEEEec-CHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 468999999 999974 666 33443 88998888876421 12347899999999987657999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
.+.+|+++|++ |++--+ ..+.++.+++. ++++++|+.+
T Consensus 81 ~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~-~~a~~~g~~~ 119 (345)
T 3f4l_A 81 YAKRALEAGKN-VLVEKPFTPTLAQAKELF-ALAKSKGLTV 119 (345)
T ss_dssp HHHHHHHTTCE-EEECSSSCSSHHHHHHHH-HHHHHHTCCE
T ss_pred HHHHHHHcCCc-EEEeCCCCCCHHHHHHHH-HHHHHcCCeE
Confidence 99999999965 555222 33455555555 5788888754
No 59
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.54 E-value=3.6e-07 Score=85.23 Aligned_cols=113 Identities=17% Similarity=0.333 Sum_probs=84.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHH-Hc-CCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAI-EY-GTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~-~~-g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
+++.+|+|||+ |++|+.+.+.+. +. ++++++..+++.... +..|. ++|.+++++.+..++|++++++|+..+
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH
Confidence 35679999999 999999888887 54 888888878764111 12466 689999999864469999999999999
Q ss_pred HHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhc-CCeEE
Q psy8894 101 AKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQS-KSRLI 143 (306)
Q Consensus 101 ~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~-gi~ii 143 (306)
.+.+.+|+++|.+ +++--+ ..+.++.+++. +++++. |+.+.
T Consensus 85 ~~~~~~al~~G~~-v~~eKp~~~~~~~~~~l~-~~a~~~~~~~~~ 127 (346)
T 3cea_A 85 PEMTIYAMNAGLN-VFCEKPLGLDFNEVDEMA-KVIKSHPNQIFQ 127 (346)
T ss_dssp HHHHHHHHHTTCE-EEECSCCCSCHHHHHHHH-HHHHTCTTSCEE
T ss_pred HHHHHHHHHCCCE-EEEcCCCCCCHHHHHHHH-HHHHhCCCCeEE
Confidence 9999999999965 554222 33444555554 578888 87654
No 60
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.52 E-value=2.3e-07 Score=85.38 Aligned_cols=109 Identities=11% Similarity=0.101 Sum_probs=83.0
Q ss_pred CCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++.+|+|||+ |++|+. ..+.+.+. ++++++..+++.... +..|++.|.+++++.++ +|++++++|+..+.+
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~--~D~V~i~tp~~~h~~ 81 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKK--CDCIFLHSSTETHYE 81 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTT--CSEEEECCCGGGHHH
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhc--CCEEEEeCCcHhHHH
Confidence 3579999999 999986 67777774 889988888764111 23588889999999884 999999999999999
Q ss_pred HHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 103 AIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
.+.+|+++|++ +++=-+ ..+.++.+++. +++++.|+.+
T Consensus 82 ~~~~al~~gk~-vl~EKP~~~~~~~~~~l~-~~a~~~g~~~ 120 (308)
T 3uuw_A 82 IIKILLNLGVH-VYVDKPLASTVSQGEELI-ELSTKKNLNL 120 (308)
T ss_dssp HHHHHHHTTCE-EEECSSSSSSHHHHHHHH-HHHHHHTCCE
T ss_pred HHHHHHHCCCc-EEEcCCCCCCHHHHHHHH-HHHHHcCCEE
Confidence 99999999987 454212 33455555554 4788888644
No 61
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.50 E-value=1.8e-07 Score=86.69 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=75.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceecCee--ccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHLDLP--VFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~Gip--~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
++.+|+|||+ |++|+...+.+++. ++++++.++++....+..|++ .|.++.+. .++|++++++|+..+.+.+.
T Consensus 8 ~~irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~---~~~DvViiatp~~~h~~~~~ 83 (304)
T 3bio_A 8 KKIRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL---ESVDVALVCSPSREVERTAL 83 (304)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS---SSCCEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC---CCCCEEEECCCchhhHHHHH
Confidence 3679999999 99999888888875 888887777653212225655 24444444 24999999999999999999
Q ss_pred HHHHcCCCEEEEecC--CCChhHHHHHHHHHHHhcCCe-EEc
Q psy8894 106 EALDAEMPLIVCITE--GIPQLDMVKVKHRLIRQSKSR-LIG 144 (306)
Q Consensus 106 e~~~~Gi~~vvi~t~--Gf~e~~~~~~~~~~ar~~gi~-iiG 144 (306)
.|+++|++. ++-.+ +...++..++. +.+++.|+. ++|
T Consensus 84 ~al~aG~~V-i~ekP~~a~~~~~~~~l~-~~a~~~g~~~~v~ 123 (304)
T 3bio_A 84 EILKKGICT-ADSFDIHDGILALRRSLG-DAAGKSGAAAVIA 123 (304)
T ss_dssp HHHTTTCEE-EECCCCGGGHHHHHHHHH-HHHHHHTCEEECS
T ss_pred HHHHcCCeE-EECCCCCCCCHHHHHHHH-HHHHhCCCEEEEe
Confidence 999999874 44343 33344445554 467888864 444
No 62
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.48 E-value=6.1e-07 Score=83.14 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=83.0
Q ss_pred EEEEEcCCCCCChHH-HHHHHHcCCeEEEeeCCCCCCc----eecCee-ccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 32 KVICQGFTGKQGTFH-SKQAIEYGTKVVGGVSPGKGGK----THLDLP-VFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 32 ~VaVvGasg~~G~~~-~~~l~~~g~~vv~~VnP~~~g~----~i~Gip-~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
+|+|||+ |++|+.. .+.+.+.++++++..+++.... +..|++ +|.+++++.+..++|++++++|+..+.+.+.
T Consensus 2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 7999999 9999987 7777767889888888764111 124665 8999999976446999999999999999999
Q ss_pred HHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 106 EALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 106 e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+|+++|.+ +++-.+ ..+.++.+++. ++|++.|+.+ +|++
T Consensus 81 ~al~~Gk~-v~~ekP~~~~~~~~~~l~-~~a~~~g~~~~~~~~ 121 (332)
T 2glx_A 81 AAIRAGKH-VLCEKPLAMTLEDAREMV-VAAREAGVVLGTNHH 121 (332)
T ss_dssp HHHHTTCE-EEECSSSCSSHHHHHHHH-HHHHHHTCCEEECCC
T ss_pred HHHHCCCe-EEEeCCCcCCHHHHHHHH-HHHHHcCCEEEEeeh
Confidence 99999965 555332 33455555554 5788888754 4544
No 63
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.48 E-value=6.5e-07 Score=88.05 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=84.5
Q ss_pred CCcEEEEEcCC---CCCChHHHHHHHHc--CCeEEEeeCCCCCCc----eecCee---ccCCHHhhhhcCCCcEEEEecC
Q psy8894 29 SKSKVICQGFT---GKQGTFHSKQAIEY--GTKVVGGVSPGKGGK----THLDLP---VFNTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGas---g~~G~~~~~~l~~~--g~~vv~~VnP~~~g~----~i~Gip---~y~sl~el~~~~~iDlavi~vp 96 (306)
++.+|+|||++ |.+|+...+.+.+. ++++++..++..... +..|++ +|.+++++.+..++|++++++|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 46799999995 67777778888875 788888888764111 234665 9999999987556999999999
Q ss_pred chhHHHHHHHHHHcCC-----CEEEEecC-CCChhHHHHHHHHHHHhcC-CeE
Q psy8894 97 PPGAAKAIHEALDAEM-----PLIVCITE-GIPQLDMVKVKHRLIRQSK-SRL 142 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi-----~~vvi~t~-Gf~e~~~~~~~~~~ar~~g-i~i 142 (306)
+..+.+.+.+|+++|. |.|+|=-+ ..+.++.+++. ++|++.| +.+
T Consensus 118 ~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~-~~a~~~g~~~~ 169 (479)
T 2nvw_A 118 VPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELY-SISQQRANLQT 169 (479)
T ss_dssp HHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHH-HHHHTCTTCEE
T ss_pred cHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHH-HHHHHcCCeEE
Confidence 9999999999999993 66776332 23444555554 5788888 644
No 64
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.48 E-value=6.1e-07 Score=83.16 Aligned_cols=112 Identities=11% Similarity=0.039 Sum_probs=82.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecC-eeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLD-LPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~G-ip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
.+|+|||+ |++|+...+.+.+. ++++++..+++.... +..| .++|.+++++. +.++|++++++|+..+.+.+
T Consensus 2 ~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~D~V~i~tp~~~h~~~~ 79 (325)
T 2ho3_A 2 LKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFF-KSSFDLVYIASPNSLHFAQA 79 (325)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHH-TSSCSEEEECSCGGGHHHHH
T ss_pred eEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHh-CCCCCEEEEeCChHHHHHHH
Confidence 58999999 99999888888876 788887877764110 1235 37899999998 33599999999999999999
Q ss_pred HHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 105 HEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
.+|+++|.+ +++-.+ ..+.++.+++. ++++++|+.+ +|.+
T Consensus 80 ~~al~~gk~-V~~EKP~~~~~~~~~~l~-~~a~~~g~~~~~~~~ 121 (325)
T 2ho3_A 80 KAALSAGKH-VILEKPAVSQPQEWFDLI-QTAEKNNCFIFEAAR 121 (325)
T ss_dssp HHHHHTTCE-EEEESSCCSSHHHHHHHH-HHHHHTTCCEEEECT
T ss_pred HHHHHcCCc-EEEecCCcCCHHHHHHHH-HHHHHcCCEEEEEEh
Confidence 999999976 555443 33455555554 5788888644 3444
No 65
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.45 E-value=6e-07 Score=83.62 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=83.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCCCCCC-c---eecCee-ccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSPGKGG-K---THLDLP-VFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP~~~g-~---~i~Gip-~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
+.||+|||+ |++|+...+.+.+. ++++++..+++... + +..|++ +|.+++++.+..++|++++++|+..+.
T Consensus 2 ~~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 80 (334)
T 3ohs_X 2 ALRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHK 80 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHH
T ss_pred ccEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 468999998 99998888888765 35788888876411 1 234774 899999998865699999999999999
Q ss_pred HHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 102 KAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
+.+.+|+++|.+ |++=-+ ..+.++.+++. ++|+++|+.+.
T Consensus 81 ~~~~~al~~Gkh-Vl~EKP~a~~~~e~~~l~-~~a~~~~~~~~ 121 (334)
T 3ohs_X 81 AAVMLCLAAGKA-VLCEKPMGVNAAEVREMV-TEARSRGLFLM 121 (334)
T ss_dssp HHHHHHHHTTCE-EEEESSSSSSHHHHHHHH-HHHHHTTCCEE
T ss_pred HHHHHHHhcCCE-EEEECCCCCCHHHHHHHH-HHHHHhCCEEE
Confidence 999999999965 565333 33445555555 57888887443
No 66
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.44 E-value=5.6e-07 Score=84.95 Aligned_cols=111 Identities=16% Similarity=0.116 Sum_probs=83.2
Q ss_pred CCcEEEEEcCCCCCChH-HHHHHHHc-CCeEEEeeCCCCCC-----ceecCeeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 29 SKSKVICQGFTGKQGTF-HSKQAIEY-GTKVVGGVSPGKGG-----KTHLDLPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~-~~~~l~~~-g~~vv~~VnP~~~g-----~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
++.+|+|||+ |++|+. ..+.+.+. ++++++..+++... ++..+.++|.+++++.+..++|++++++|+..+.
T Consensus 4 ~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 4 SLIKVGLVGI-GAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 3579999999 998875 67788776 88888888876411 1223678999999998865699999999999999
Q ss_pred HHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 102 KAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
+.+.+|+++|++ |++=-+ ..+.++.+++. +++++.|+.+
T Consensus 83 ~~~~~al~aGkh-Vl~EKPla~~~~e~~~l~-~~a~~~g~~~ 122 (359)
T 3m2t_A 83 EMGLLAMSKGVN-VFVEKPPCATLEELETLI-DAARRSDVVS 122 (359)
T ss_dssp HHHHHHHHTTCE-EEECSCSCSSHHHHHHHH-HHHHHHTCCE
T ss_pred HHHHHHHHCCCe-EEEECCCcCCHHHHHHHH-HHHHHcCCEE
Confidence 999999999977 454222 33444555554 4788888643
No 67
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.43 E-value=3.5e-07 Score=88.72 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCCcEEEEEcCCCCCCh-HHHHHHHHc-CCeEEEeeCCCCCCc----eecCee-----ccCCHHhhhhcCCCcEEEEecC
Q psy8894 28 TSKSKVICQGFTGKQGT-FHSKQAIEY-GTKVVGGVSPGKGGK----THLDLP-----VFNTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~-~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip-----~y~sl~el~~~~~iDlavi~vp 96 (306)
+++.+|+|||+ |++|+ .+.+.+.+. ++++++.++++.... +..|++ +|.+++++.+..++|++++++|
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp 159 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILP 159 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCC
Confidence 34679999999 99997 777877775 788888888764111 123554 7999999987546999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
+..+.+.+.+|+++|++ |++--+ ..+.++.+++. +++++.|+.+ +|.+
T Consensus 160 ~~~h~~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~-~~a~~~g~~~~v~~~ 209 (433)
T 1h6d_A 160 NSLHAEFAIRAFKAGKH-VMCEKPMATSVADCQRMI-DAAKAANKKLMIGYR 209 (433)
T ss_dssp GGGHHHHHHHHHHTTCE-EEECSSCCSSHHHHHHHH-HHHHHHTCCEEECCG
T ss_pred chhHHHHHHHHHHCCCc-EEEcCCCCCCHHHHHHHH-HHHHHhCCeEEEEec
Confidence 99999999999999976 555222 34455555554 5788888644 4444
No 68
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.37 E-value=1.9e-06 Score=82.39 Aligned_cols=111 Identities=15% Similarity=0.158 Sum_probs=82.5
Q ss_pred CCcEEEEEcCCCC---CChHHHHHHHHc-CCeEEE-eeCCCCCCc----eecCe---eccCCHHhhhhc-----CCCcEE
Q psy8894 29 SKSKVICQGFTGK---QGTFHSKQAIEY-GTKVVG-GVSPGKGGK----THLDL---PVFNTVKEARDA-----TGAEAT 91 (306)
Q Consensus 29 ~~~~VaVvGasg~---~G~~~~~~l~~~-g~~vv~-~VnP~~~g~----~i~Gi---p~y~sl~el~~~-----~~iDla 91 (306)
++.+|+|||+ |. +|+.+...+... ++++++ ..++..... +..|+ ++|.+++++.+. .++|++
T Consensus 11 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 89 (398)
T 3dty_A 11 QPIRWAMVGG-GSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAV 89 (398)
T ss_dssp SCEEEEEEEC-CTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEE
T ss_pred CcceEEEEcC-CccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEE
Confidence 4689999999 88 999888877766 588887 457653111 23577 699999999764 359999
Q ss_pred EEecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE
Q psy8894 92 VIYVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL 142 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i 142 (306)
++++|+..+.+.+.+|+++|++ |++=-+ ..+.++.+++. ++++++|+.+
T Consensus 90 ~i~tp~~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~ 139 (398)
T 3dty_A 90 SIATPNGTHYSITKAALEAGLH-VVCEKPLCFTVEQAENLR-ELSHKHNRIV 139 (398)
T ss_dssp EEESCGGGHHHHHHHHHHTTCE-EEECSCSCSCHHHHHHHH-HHHHHTTCCE
T ss_pred EECCCcHHHHHHHHHHHHCCCe-EEEeCCCcCCHHHHHHHH-HHHHHcCCeE
Confidence 9999999999999999999976 554111 23445555555 5788888744
No 69
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.36 E-value=1.4e-06 Score=83.87 Aligned_cols=116 Identities=22% Similarity=0.240 Sum_probs=84.3
Q ss_pred CCCcEEEEEcCCCC---CChHHHHHHHHc-CCeEEE-eeCCCCCCc----eecCe---eccCCHHhhhhc-----CCCcE
Q psy8894 28 TSKSKVICQGFTGK---QGTFHSKQAIEY-GTKVVG-GVSPGKGGK----THLDL---PVFNTVKEARDA-----TGAEA 90 (306)
Q Consensus 28 ~~~~~VaVvGasg~---~G~~~~~~l~~~-g~~vv~-~VnP~~~g~----~i~Gi---p~y~sl~el~~~-----~~iDl 90 (306)
.++.+|+|||+ |+ +|+.+.+.+... ++++++ .+++..... +..|+ ++|.+++++.+. .++|+
T Consensus 35 m~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~ 113 (417)
T 3v5n_A 35 QKRIRLGMVGG-GSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEA 113 (417)
T ss_dssp CCCEEEEEESC-C--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSE
T ss_pred CCcceEEEEcC-CCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcE
Confidence 35789999999 88 888887777766 578886 567753111 23477 599999999875 46999
Q ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCe-EEccC
Q psy8894 91 TVIYVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSR-LIGPN 146 (306)
Q Consensus 91 avi~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~-iiGPN 146 (306)
+++++|+..+.+++.+|+++|++ |+|=-+ ..+.++.+++. +++++.|+. .+|-|
T Consensus 114 V~I~tp~~~H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~~~v~~~ 169 (417)
T 3v5n_A 114 VAIVTPNHVHYAAAKEFLKRGIH-VICDKPLTSTLADAKKLK-KAADESDALFVLTHN 169 (417)
T ss_dssp EEECSCTTSHHHHHHHHHTTTCE-EEEESSSCSSHHHHHHHH-HHHHHCSSCEEEECG
T ss_pred EEECCCcHHHHHHHHHHHhCCCe-EEEECCCcCCHHHHHHHH-HHHHHcCCEEEEEec
Confidence 99999999999999999999977 555223 33455555555 578888874 44444
No 70
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.36 E-value=6.7e-07 Score=80.97 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=88.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEA 107 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~ 107 (306)
...+||+++|. |++|+...+. . ++++++..+ ...+ ++ |+.+..+++++.. ++|++|-|.+++.+.+.+..+
T Consensus 10 ~~~~rV~i~G~-GaIG~~v~~~--~-~leLv~v~~-~k~g-el-gv~a~~d~d~lla--~pD~VVe~A~~~av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGM-GNIGKKLVEL--G-NFEKIYAYD-RISK-DI-PGVVRLDEFQVPS--DVSTVVECASPEAVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECC-SHHHHHHHHH--S-CCSEEEEEC-SSCC-CC-SSSEECSSCCCCT--TCCEEEECSCHHHHHHHHHHH
T ss_pred cccceEEEECc-CHHHHHHHhc--C-CcEEEEEEe-cccc-cc-CceeeCCHHHHhh--CCCEEEECCCHHHHHHHHHHH
Confidence 44689999999 9999999887 4 899888777 3323 44 8888899999985 499999999999999999999
Q ss_pred HHcCCCEEEEecCC-CChhHHHHHHHHHHHhcCCeEEccCC
Q psy8894 108 LDAEMPLIVCITEG-IPQLDMVKVKHRLIRQSKSRLIGPNC 147 (306)
Q Consensus 108 ~~~Gi~~vvi~t~G-f~e~~~~~~~~~~ar~~gi~iiGPNc 147 (306)
+++|+..++ .+.| +...+..+.++++|++.|-++..|.-
T Consensus 81 L~aG~dvv~-~S~gaLad~~l~~~L~~aA~~gg~~l~vpSG 120 (253)
T 1j5p_A 81 LKNPVNYII-ISTSAFADEVFRERFFSELKNSPARVFFPSG 120 (253)
T ss_dssp TTSSSEEEE-CCGGGGGSHHHHHHHHHHHHTCSCEEECCCT
T ss_pred HHCCCCEEE-cChhhhcCHHHHHHHHHHHHHCCCeEEecCC
Confidence 999999655 5666 45555556666789999999977653
No 71
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.33 E-value=1.2e-06 Score=84.96 Aligned_cols=115 Identities=15% Similarity=0.080 Sum_probs=85.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc-e------ecC---eeccC----CHHhhhhcCCCcEEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK-T------HLD---LPVFN----TVKEARDATGAEATVI 93 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~-~------i~G---ip~y~----sl~el~~~~~iDlavi 93 (306)
++.+|+|||+ |.+|+.+.+.+.+. ++++++..+++.... + ..| .++|. +++++.+..++|++++
T Consensus 19 ~~~rvgiIG~-G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i 97 (444)
T 2ixa_A 19 KKVRIAFIAV-GLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFV 97 (444)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEE
T ss_pred CCceEEEEec-CHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEE
Confidence 4679999998 99998888888875 888988888764111 1 124 57898 9999987556999999
Q ss_pred ecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeE-EccC
Q psy8894 94 YVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRL-IGPN 146 (306)
Q Consensus 94 ~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~i-iGPN 146 (306)
++|+..+.+.+.+|+++|++ |++=-+ ..+.++.+++. ++|++.|+.+ ++-|
T Consensus 98 ~tp~~~h~~~~~~al~aGkh-V~~EKP~a~~~~ea~~l~-~~a~~~g~~~~v~~~ 150 (444)
T 2ixa_A 98 SSPWEWHHEHGVAAMKAGKI-VGMEVSGAITLEECWDYV-KVSEQTGVPLMALEN 150 (444)
T ss_dssp CCCGGGHHHHHHHHHHTTCE-EEECCCCCSSHHHHHHHH-HHHHHHCCCEEECCG
T ss_pred cCCcHHHHHHHHHHHHCCCe-EEEeCCCcCCHHHHHHHH-HHHHHhCCeEEEEec
Confidence 99999999999999999975 554222 22344555554 4788888744 4544
No 72
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.28 E-value=8.2e-07 Score=84.14 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCCcEEEEEcCCCCCChH-HH----HHHHHcC-CeEE---------EeeCCCCCC-c---eecCee-ccCCHHhhhhcCC
Q psy8894 28 TSKSKVICQGFTGKQGTF-HS----KQAIEYG-TKVV---------GGVSPGKGG-K---THLDLP-VFNTVKEARDATG 87 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~-~~----~~l~~~g-~~vv---------~~VnP~~~g-~---~i~Gip-~y~sl~el~~~~~ 87 (306)
.++.+|+|+|+.|.+|+. +. +.+.+.+ +.++ +.++++... + +..|++ +|.+++++.+..+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~ 83 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKN 83 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCC
Confidence 356799999966999987 65 6666653 3321 355554311 1 235774 8999999998667
Q ss_pred CcEEEEecCchhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCe-EEccC
Q psy8894 88 AEATVIYVPPPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSR-LIGPN 146 (306)
Q Consensus 88 iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~-iiGPN 146 (306)
+|++++++|+..+.+.+.+|+++|++ |++=-+ ..+.++.+++. ++|+++|+. .++.|
T Consensus 84 iD~V~i~tp~~~h~~~~~~al~~Gk~-V~~EKP~a~~~~~~~~l~-~~a~~~~~~~~v~~~ 142 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLTQAINAGKH-VYCEKPIATNFEEALEVV-KLANSKGVKHGTVQD 142 (383)
T ss_dssp CCEEEECSCSSSSHHHHHHHHTTTCE-EEECSCSCSSHHHHHHHH-HHHHHTTCCEEECCG
T ss_pred CCEEEECCCchHHHHHHHHHHHCCCe-EEEcCCCCCCHHHHHHHH-HHHHHcCCeEEEEec
Confidence 99999999999999999999999977 454112 34455666655 478888874 34444
No 73
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.28 E-value=1.3e-06 Score=81.46 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=79.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC--Ccee------cC--eeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG--GKTH------LD--LPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~--g~~i------~G--ip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
+.||+|||+ |..++...+.+ ..++++++..++... .+.. .| .++|.+++++.+..++|++++++|+..
T Consensus 2 ~~rvgiiG~-G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 2 SLKICVIGS-SGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp CEEEEEECS-SSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred ceEEEEEcc-chhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 368999999 77777666666 558899988887531 1111 24 479999999987556999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCe
Q psy8894 100 AAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSR 141 (306)
Q Consensus 100 ~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ 141 (306)
+.+.+.+|+++|++ |++==+ ..+.++.+++. ++|++.|..
T Consensus 80 H~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~-~~a~~~g~~ 120 (337)
T 3ip3_A 80 NGKILLEALERKIH-AFVEKPIATTFEDLEKIR-SVYQKVRNE 120 (337)
T ss_dssp HHHHHHHHHHTTCE-EEECSSSCSSHHHHHHHH-HHHHHHTTT
T ss_pred HHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHH-HHHHHhCCc
Confidence 99999999999977 454111 23344555555 578888865
No 74
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.28 E-value=6.9e-07 Score=83.90 Aligned_cols=115 Identities=11% Similarity=0.068 Sum_probs=79.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc--------CCeEEEeeCCCCCCc----eecCe-eccCCHHhhhhcCCCcEEEEecC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY--------GTKVVGGVSPGKGGK----THLDL-PVFNTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~--------g~~vv~~VnP~~~g~----~i~Gi-p~y~sl~el~~~~~iDlavi~vp 96 (306)
+-||+|||+ |.+|+.+.+.+++. +.++++..+++.... +..|+ ++|.+++++.+..++|+++|++|
T Consensus 6 klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 6 NLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC
T ss_pred cCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 468999999 99998887766553 236888888764111 23465 58999999987667999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEEecC-CCChhHHHHHHH--HHHHhcCCe-EEccC
Q psy8894 97 PPGAAKAIHEALDAEMPLIVCITE-GIPQLDMVKVKH--RLIRQSKSR-LIGPN 146 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~--~~ar~~gi~-iiGPN 146 (306)
+..+.+.+.+|+++|.+ |+|==+ ..+.++.+++.+ +.+++.|+. .+|-+
T Consensus 85 ~~~H~~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~ 137 (390)
T 4h3v_A 85 GDSHAEIAIAALEAGKH-VLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFT 137 (390)
T ss_dssp GGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECG
T ss_pred hHHHHHHHHHHHHcCCC-ceeecCcccchhHHHHHHHHHHHHHhcCCceEEEee
Confidence 99999999999999976 555111 223444444421 225667763 34444
No 75
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.24 E-value=8.8e-07 Score=86.32 Aligned_cols=114 Identities=11% Similarity=-0.069 Sum_probs=80.1
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc-e---ec-C----------------------eeccCC
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK-T---HL-D----------------------LPVFNT 78 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~-~---i~-G----------------------ip~y~s 78 (306)
..++.||+|||+ |++|+...+.+.+. ++++++..+++.... + .. | .++|.+
T Consensus 20 ~~k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 20 TGKPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp TTCCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred cCCceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 456789999999 99999888877765 888888877654111 0 01 3 568999
Q ss_pred HHhhhhcCCCcEEEEecCc-hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 79 VKEARDATGAEATVIYVPP-PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 79 l~el~~~~~iDlavi~vp~-~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
++++.+..++|++++++|. +.+.+.+.+|+++|.+. ++.......++..++ .++|+++|+.+.
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHV-v~~nk~l~~~eg~eL-~~~A~e~Gvvl~ 162 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHL-VMMNVEADVTIGPYL-KAQADKQGVIYS 162 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEE-EECCHHHHHHHHHHH-HHHHHHHTCCEE
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcE-EecCcccCHHHHHHH-HHHHHHhCCeee
Confidence 9999876579999999975 57799999999999885 433322211222333 356778776543
No 76
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.15 E-value=3.9e-06 Score=68.04 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=67.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC--CCceecCeeccCCHHhhh---hcCCCcEEEEecCchh--
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK--GGKTHLDLPVFNTVKEAR---DATGAEATVIYVPPPG-- 99 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~--~g~~i~Gip~y~sl~el~---~~~~iDlavi~vp~~~-- 99 (306)
++.++++|+|+ |..|+...+.+.+. ||++++.++++. .+..+.|+|++. ++++. +++.+|.+++++|...
T Consensus 2 ~~~~~vlIiGa-G~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g-~~~l~~~~~~~~id~viia~~~~~~~ 79 (141)
T 3nkl_A 2 NAKKKVLIYGA-GSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYR-PKYLERLIKKHCISTVLLAVPSASQV 79 (141)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEEC-GGGHHHHHHHHTCCEEEECCTTSCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEEC-HHHHHHHHHHCCCCEEEEeCCCCCHH
Confidence 45689999999 88898888888775 899998887653 345688999987 55554 3446999999998543
Q ss_pred -HHHHHHHHHHcCCCEEE
Q psy8894 100 -AAKAIHEALDAEMPLIV 116 (306)
Q Consensus 100 -~~~~~~e~~~~Gi~~vv 116 (306)
..++++.|.+.|++..+
T Consensus 80 ~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 80 QKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp HHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 37888999999999554
No 77
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.09 E-value=8.7e-06 Score=75.32 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=75.4
Q ss_pred cEEEEEcCCCCCCh-HHHHHHHHc-CCeEEEeeCCCCCCc----eecCeec-cCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 31 SKVICQGFTGKQGT-FHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPV-FNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 31 ~~VaVvGasg~~G~-~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~-y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
.+|+|||+ |++|+ ...+.+.+. +++++ ..+++.... +..|++. |.+..++.. .++|++++++|+..+.+.
T Consensus 3 ~~igiIG~-G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~-~~~D~V~i~tp~~~h~~~ 79 (323)
T 1xea_A 3 LKIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYRVSATCTDYRDVLQ-YGVDAVMIHAATDVHSTL 79 (323)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTTCCCCCSSTTGGGG-GCCSEEEECSCGGGHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcCCCccccCHHHHhh-cCCCEEEEECCchhHHHH
Confidence 58999999 99998 477888775 78887 877764111 1246664 554434332 259999999999999999
Q ss_pred HHHHHHcCCCEEEEecC-CCChhHHHHHHHHHHHhcCCeEE
Q psy8894 104 IHEALDAEMPLIVCITE-GIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~-Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
+.+|+++|.+. ++=-+ ..+.++.+++. +++++.|+.+.
T Consensus 80 ~~~al~~Gk~V-~~EKP~~~~~~~~~~l~-~~a~~~g~~~~ 118 (323)
T 1xea_A 80 AAFFLHLGIPT-FVDKPLAASAQECENLY-ELAEKHHQPLY 118 (323)
T ss_dssp HHHHHHTTCCE-EEESCSCSSHHHHHHHH-HHHHHTTCCEE
T ss_pred HHHHHHCCCeE-EEeCCCcCCHHHHHHHH-HHHHhcCCeEE
Confidence 99999999874 44222 33445555554 57888887544
No 78
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.03 E-value=0.00024 Score=69.36 Aligned_cols=238 Identities=14% Similarity=0.182 Sum_probs=142.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc----hhHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP----PGAAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~----~~~~~~~~e 106 (306)
-+|++|.-||.++......+.+.|.-.-..|.-.. + .++..-+-|+-+.++.+.++++++.-. ..-.++++.
T Consensus 150 G~v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~--~--~~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~ 225 (457)
T 2csu_A 150 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--M--ADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKR 225 (457)
T ss_dssp CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTT--C--CSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCC--c--CCCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHH
Confidence 56999999988887777777776554333444432 2 132222223444444457788877443 455566666
Q ss_pred HHHcCCCEEEEecCCCChhHH-------------HHHHHHHHHhcCCeEE-ccCCCceecCccccccCCCCCCCCCCCEE
Q psy8894 107 ALDAEMPLIVCITEGIPQLDM-------------VKVKHRLIRQSKSRLI-GPNCPGIIAPEQCKIGIMPGHIHQRGCVG 172 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~Gf~e~~~-------------~~~~~~~ar~~gi~ii-GPNc~Gi~~~~~~~~~~~~~~~~~~G~va 172 (306)
+ ..+.+. +.+-.|-++... .+....+-|+.|+..+ -|. -+... .. .+....++-++|+
T Consensus 226 ~-~~~KPV-v~~k~G~~~~g~~aa~~Htgalag~~~~~~AafRqaGv~~v~~~~--El~~~---~~-~l~~~~~~g~rva 297 (457)
T 2csu_A 226 V-TKKKPI-IALKAGKSESGARAASSHTGSLAGSWKIYEAAFKQSGVLVANTID--EMLSM---AR-AFSQPLPRGNKVA 297 (457)
T ss_dssp H-HHHSCE-EEEECC------------------CHHHHHHHHHHTTCEEESSHH--HHHHH---HT-TTTSCCCSSSEEE
T ss_pred h-cCCCCE-EEEEcCCCccccchhhcccCccCCcHHHHHHHHHhCCCeEECCHH--HHHHH---HH-HhcCCCCCCCcEE
Confidence 6 355564 445666654421 2223345577886322 221 11110 01 1111223456899
Q ss_pred EEecChhhHHHHHHHHHhCCCceE---------------------EEEecCCCCCCC-CCHHHHHHHhhcCCCccEEEEE
Q psy8894 173 VVSRSGTLTYEAVHQTTQVGLGQT---------------------LCVGIGGDPFNG-TNFIDCLEVFLKDPETKGIILI 230 (306)
Q Consensus 173 ~vSqSG~~~~~~~~~~~~~g~g~s---------------------~~vs~Gn~~~~d-v~~~d~l~~l~~D~~t~~I~ly 230 (306)
+++-||+++...++.+...|+-+. ..+-+|.+ ++ -.+.+.++-+.+||++.+|++.
T Consensus 298 iitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~--a~~~~~~~al~~~l~dp~vd~vlv~ 375 (457)
T 2csu_A 298 IMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIAS--ARGEDYYRTAKLLLQDPNVDMLIAI 375 (457)
T ss_dssp EEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTT--CCHHHHHHHHHHHHHSTTCSEEEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCC--CCHHHHHHHHHHHhcCCCCCEEEEE
Confidence 999999999999999999888642 34555544 22 2356788899999999999987
Q ss_pred Eee--C-----C------------CCCCCcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhH
Q psy8894 231 GEI--G-----G------------GPNAKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQ 291 (306)
Q Consensus 231 ~E~--~-----~------------~~~~KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~e 291 (306)
+-. . . ...+|||++...+.+. . ....+.|+++|+...+++++
T Consensus 376 ~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~------------------~-~~~~~~L~~~Gip~~~spe~ 436 (457)
T 2csu_A 376 CVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYV------------------S-EKAKELLEKNGIPTYERPED 436 (457)
T ss_dssp EECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTT------------------T-HHHHHHHHTTTCCEESSHHH
T ss_pred ccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcc------------------h-HHHHHHHHhCCCCccCCHHH
Confidence 731 1 1 1267999996544321 1 22357899999999999999
Q ss_pred HHHHHHHHHH
Q psy8894 292 MGNELLKEMK 301 (306)
Q Consensus 292 l~~~~~~~~~ 301 (306)
-..++.++..
T Consensus 437 Av~al~~l~~ 446 (457)
T 2csu_A 437 VASAAYALVE 446 (457)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988876543
No 79
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.02 E-value=2.3e-05 Score=73.42 Aligned_cols=157 Identities=16% Similarity=0.069 Sum_probs=96.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHH---------cCCeEEEeeCCCCCCcee-------------cCeeccC--CHHhhhhcC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIE---------YGTKVVGGVSPGKGGKTH-------------LDLPVFN--TVKEARDAT 86 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~---------~g~~vv~~VnP~~~g~~i-------------~Gip~y~--sl~el~~~~ 86 (306)
.+|+|+|+ |++|+...+.+.+ .++++++..+++. ... ...++|. +++++.+..
T Consensus 3 irvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~--~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~ 79 (327)
T 3do5_A 3 IKIAIVGF-GTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKS--SISGDFSLVEALRMKRETGMLRDDAKAIEVVRSA 79 (327)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSC--EEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHS
T ss_pred EEEEEEec-cHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCCh--HhccccCHHHHHhhhccCccccCCCCHHHHhcCC
Confidence 58999998 9999988776655 3677888888763 111 1234676 899998766
Q ss_pred CCcEEEEecCchhH----HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCCC
Q psy8894 87 GAEATVIYVPPPGA----AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIMP 162 (306)
Q Consensus 87 ~iDlavi~vp~~~~----~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~~ 162 (306)
++|++++++|+..+ .+.+.+|+++|++. ++-..+.-.....++ .++|+++|..+.-..+.|-..|.-...-
T Consensus 80 ~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhV-v~~NKkpla~~~~eL-~~~A~~~g~~~~~ea~v~~g~Pii~~l~--- 154 (327)
T 3do5_A 80 DYDVLIEASVTRVDGGEGVNYIREALKRGKHV-VTSNKGPLVAEFHGL-MSLAERNGVRLMYEATVGGAMPVVKLAK--- 154 (327)
T ss_dssp CCSEEEECCCCC----CHHHHHHHHHTTTCEE-EECCSHHHHHHHHHH-HHHHHHTTCCEECGGGSSTTSCCHHHHH---
T ss_pred CCCEEEECCCCcccchhHHHHHHHHHHCCCeE-EecCchhhHHHHHHH-HHHHHhhCCcEEEEEEeeecCHHHHHHH---
Confidence 79999999998875 89999999999984 432212211223344 4589999987764433333333211100
Q ss_pred CCCCCCCCEEEEe--cChhhHHHHHHHHHhCCCceEE
Q psy8894 163 GHIHQRGCVGVVS--RSGTLTYEAVHQTTQVGLGQTL 197 (306)
Q Consensus 163 ~~~~~~G~va~vS--qSG~~~~~~~~~~~~~g~g~s~ 197 (306)
.....+.|.=|. .||+... ++......|..|+.
T Consensus 155 -~~l~~~~I~~I~GIlnGT~ny-ilt~m~~~g~~f~~ 189 (327)
T 3do5_A 155 -RYLALCEIESVKGIFNGTCNY-ILSRMEEERLPYEH 189 (327)
T ss_dssp -TTTTTSCEEEEEEECCHHHHH-HHHHHHHHCCCHHH
T ss_pred -HHhhCCCccEEEEEECCCcCc-chhhcCcCCcCHHH
Confidence 112345565554 3777554 44444344555554
No 80
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.93 E-value=6.1e-06 Score=80.45 Aligned_cols=113 Identities=12% Similarity=0.035 Sum_probs=80.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHH----------cCCeEEEeeCCCCCCc-e-ecCeeccCCHHhhhhcCCCcEEEEec
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIE----------YGTKVVGGVSPGKGGK-T-HLDLPVFNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~----------~g~~vv~~VnP~~~g~-~-i~Gip~y~sl~el~~~~~iDlavi~v 95 (306)
.++.+|+|+|+ |+.|+..++.+.+ .++++++..+++.... . ..+.++|.+++++.++.++|++++++
T Consensus 8 Mk~irIgIIG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 8 MKPIHVGLLGL-GTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp CSCEEEEEECC-HHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECC
T ss_pred hCcccEEEECC-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcC
Confidence 35789999998 9999877655432 3667888888764111 1 23567899999998766799999999
Q ss_pred Cc-hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 96 PP-PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 96 p~-~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
|+ +.+.+.+.+|+++|++ |++-.+....++..++ .++|+++|+.+.
T Consensus 87 p~~~~h~~~~~~AL~aGKh-Vvtenkal~a~~~~eL-~~~A~~~gv~l~ 133 (444)
T 3mtj_A 87 GGLEPARELVMQAIANGKH-VVTANKHLVAKYGNEI-FAAAQAKGVMVT 133 (444)
T ss_dssp CSSTTHHHHHHHHHHTTCE-EEECCHHHHHHHHHHH-HHHHHHHTCCEE
T ss_pred CCchHHHHHHHHHHHcCCE-EEECCcccCHHHHHHH-HHHHHHhCCeEE
Confidence 96 8999999999999988 4432222112223344 358899998774
No 81
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.84 E-value=9.2e-05 Score=68.59 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=72.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~~ 105 (306)
.++|+|||+ |.+|+...+.|.+.|++++ ..|++... ++ -.|+..+.+++++.+. .|++++++|. ..+.+++.
T Consensus 31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~e~~~~--aDvVi~~vp~~~~~~~v~~ 106 (320)
T 4dll_A 31 ARKITFLGT-GSMGLPMARRLCEAGYALQ-VWNRTPARAASLAALGATIHEQARAAARD--ADIVVSMLENGAVVQDVLF 106 (320)
T ss_dssp CSEEEEECC-TTTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTTCEEESSHHHHHTT--CSEEEECCSSHHHHHHHHT
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHCCCEeeCCHHHHHhc--CCEEEEECCCHHHHHHHHc
Confidence 468999999 9999999999999999965 66765310 11 2377888899998876 9999999996 45555554
Q ss_pred --HHHH-cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 106 --EALD-AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 106 --e~~~-~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+..+ ..-..+++-.+..+....+++. +..++.|+.++.
T Consensus 107 ~~~~~~~l~~~~~vi~~st~~~~~~~~~~-~~~~~~g~~~~~ 147 (320)
T 4dll_A 107 AQGVAAAMKPGSLFLDMASITPREARDHA-ARLGALGIAHLD 147 (320)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHH-HHHHHTTCEEEE
T ss_pred chhHHhhCCCCCEEEecCCCCHHHHHHHH-HHHHHcCCEEEe
Confidence 3333 2223334333333333333333 345677887764
No 82
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.79 E-value=4.3e-05 Score=71.58 Aligned_cols=111 Identities=14% Similarity=0.037 Sum_probs=75.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc--------CCeEEEeeCCCCCC-ce-e-----------cCee-ccC---CHHhhh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY--------GTKVVGGVSPGKGG-KT-H-----------LDLP-VFN---TVKEAR 83 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~--------g~~vv~~VnP~~~g-~~-i-----------~Gip-~y~---sl~el~ 83 (306)
++.+|+|+|+ |.+|+...+.+.+. ++++++..+++... .+ + .+++ +|. +++++.
T Consensus 5 ~~irvgIiG~-G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 5 KTINLSIFGL-GNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL 83 (331)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH
T ss_pred cEEeEEEEec-CHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh
Confidence 4679999999 99999887776553 36788887766410 01 1 1332 555 888887
Q ss_pred hcCCCcEEEEecCch----hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 84 DATGAEATVIYVPPP----GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 84 ~~~~iDlavi~vp~~----~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
..++|++++++|+. .+.+.+.+|+++|++. ++-..+.-.++..++ .++|+++|+++.
T Consensus 84 -~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhV-vtanK~pla~~~~eL-~~~A~~~gv~~~ 144 (331)
T 3c8m_A 84 -ARDFDIVVDATPASADGKKELAFYKETFENGKDV-VTANKSGLANFWPEI-MEYARSNNRRIR 144 (331)
T ss_dssp -HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEE-EECCCHHHHHHHHHH-HHHHHHHTCCEE
T ss_pred -CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeE-EecCchhhHHHHHHH-HHHHHHcCCEEE
Confidence 55799999999995 8889999999999884 431222211223344 357899997664
No 83
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.76 E-value=6.2e-05 Score=71.28 Aligned_cols=112 Identities=11% Similarity=0.082 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c--eecCeeccCCHHhhhhc-CCCcEEEEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K--THLDLPVFNTVKEARDA-TGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~--~i~Gip~y~sl~el~~~-~~iDlavi~vp~~~~~~~~ 104 (306)
+.++|+|||. |+||+...++|.+.|++++ ..|++... + .-.|+..+.+++++... ..+|++++++|+..+.+++
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGGHECV-VYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 4578999998 9999999999999999875 66765310 0 12377788899998765 1359999999999888888
Q ss_pred HHHHHc-CCCEEEE-ecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 HEALDA-EMPLIVC-ITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 ~e~~~~-Gi~~vvi-~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+++... .-..+++ .++.. ..+..++.+ .+++.|+++++
T Consensus 99 ~~l~~~l~~g~iiId~st~~-~~~~~~~~~-~l~~~g~~~vd 138 (358)
T 4e21_A 99 QRMTPLLAANDIVIDGGNSH-YQDDIRRAD-QMRAQGITYVD 138 (358)
T ss_dssp HHHGGGCCTTCEEEECSSCC-HHHHHHHHH-HHHTTTCEEEE
T ss_pred HHHHhhCCCCCEEEeCCCCC-hHHHHHHHH-HHHHCCCEEEe
Confidence 777653 2233343 34443 333333333 45677887764
No 84
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.76 E-value=6.8e-05 Score=68.10 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=74.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecC-chhHHHHH--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVP-PPGAAKAI-- 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp-~~~~~~~~-- 104 (306)
++|+|+|+ |++|+...+.+.+.|++++ ..|++....+ -.|+..+.+++++.+. .|++++++| +..+.+++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~~ 77 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVT-IWNRSPEKAEELAALGAERAATPCEVVES--CPVTFAMLADPAAAEEVCFG 77 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHHHS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHhc--CCEEEEEcCCHHHHHHHHcC
Confidence 58999999 9999999999999999875 6676541111 2378888999998876 899999999 56777777
Q ss_pred -HHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 -HEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 -~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+++.+. .-..+++-+++......+++. +..++.|+.++.
T Consensus 78 ~~~l~~~l~~~~~vi~~st~~~~~~~~~~-~~~~~~g~~~~~ 118 (287)
T 3pef_A 78 KHGVLEGIGEGRGYVDMSTVDPATSQRIG-VAVVAKGGRFLE 118 (287)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHH-HHHHHTTCEEEE
T ss_pred cchHhhcCCCCCEEEeCCCCCHHHHHHHH-HHHHHhCCEEEE
Confidence 555442 222344434454444444443 345667877664
No 85
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.74 E-value=9.3e-05 Score=67.41 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=71.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC---eEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT---KVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~---~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.++|+|||+ |+||+...+.+.+.|+ +++ ..|++.... +..|+.++.+..++.+. .|++++++|++...+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~-v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~--aDvVilav~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRIC-VTNRSLDKLDFFKEKCGVHTTQDNRQGALN--ADVVVLAVKPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEE-EECSSSHHHHHHHHTTCCEEESCHHHHHSS--CSEEEECSCGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEE-EEeCCHHHHHHHHHHcCCEEeCChHHHHhc--CCeEEEEeCHHHHHH
Confidence 368999999 9999999999999988 554 677764111 12388888888887765 999999999999999
Q ss_pred HHHHHHHc--CCC-EEEEecCCCChhHHH
Q psy8894 103 AIHEALDA--EMP-LIVCITEGIPQLDMV 128 (306)
Q Consensus 103 ~~~e~~~~--Gi~-~vvi~t~Gf~e~~~~ 128 (306)
+++++... .-+ .++..+.|++-+.++
T Consensus 79 vl~~l~~~~l~~~~iiiS~~agi~~~~l~ 107 (280)
T 3tri_A 79 VCEELKDILSETKILVISLAVGVTTPLIE 107 (280)
T ss_dssp HHHHHHHHHHTTTCEEEECCTTCCHHHHH
T ss_pred HHHHHHhhccCCCeEEEEecCCCCHHHHH
Confidence 99888653 334 555567898755433
No 86
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.73 E-value=9.5e-05 Score=68.29 Aligned_cols=112 Identities=11% Similarity=0.085 Sum_probs=75.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCC--CCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGK--GGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~--~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
+.++|+|||+ |.||....+.|.+.|+ +++ ..|++. ... ...|+..+.+++++.+. .|++++++|+....+
T Consensus 23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~--aDvVi~~vp~~~~~~ 98 (312)
T 3qsg_A 23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMA-AYDAASAESWRPRAEELGVSCKASVAEVAGE--CDVIFSLVTAQAALE 98 (312)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHHSCCEEE-EECSSCHHHHHHHHHHTTCEECSCHHHHHHH--CSEEEECSCTTTHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCeEE-EEcCCCCHHHHHHHHHCCCEEeCCHHHHHhc--CCEEEEecCchhHHH
Confidence 3478999999 9999999999999999 654 677641 001 12478888899998776 899999999999999
Q ss_pred HHHHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhc--CCeEEcc
Q psy8894 103 AIHEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQS--KSRLIGP 145 (306)
Q Consensus 103 ~~~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~--gi~iiGP 145 (306)
++++.... .-..+++-.+........++.+ ..++. |++++.+
T Consensus 99 ~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~-~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 99 VAQQAGPHLCEGALYADFTSCSPAVKRAIGD-VISRHRPSAQYAAV 143 (312)
T ss_dssp HHHHHGGGCCTTCEEEECCCCCHHHHHHHHH-HHHHHCTTCEEEEE
T ss_pred HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHH-HHHhhcCCCeEEec
Confidence 88877663 2233444344444433333333 33455 7766543
No 87
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.71 E-value=8.7e-05 Score=66.08 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=68.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC----CeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG----TKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g----~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
++|+|+|+ |++|+...+.|.+.| +++. .+|++. +. .|+.++.+.+++.+. .|++++++|+..+.+++++
T Consensus 5 m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~--~~-~g~~~~~~~~~~~~~--~D~vi~~v~~~~~~~v~~~ 77 (262)
T 2rcy_A 5 IKLGFMGL-GQMGSALAHGIANANIIKKENLF-YYGPSK--KN-TTLNYMSSNEELARH--CDIIVCAVKPDIAGSVLNN 77 (262)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHTSSCGGGEE-EECSSC--CS-SSSEECSCHHHHHHH--CSEEEECSCTTTHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCCCCCeEE-EEeCCc--cc-CceEEeCCHHHHHhc--CCEEEEEeCHHHHHHHHHH
Confidence 57999999 999999999998888 4553 667664 22 678888888887765 9999999999999999987
Q ss_pred HHHc-CCCEEEEecCCCChhH
Q psy8894 107 ALDA-EMPLIVCITEGIPQLD 126 (306)
Q Consensus 107 ~~~~-Gi~~vvi~t~Gf~e~~ 126 (306)
+... .-+.++..+.|++.+.
T Consensus 78 l~~~l~~~~vv~~~~gi~~~~ 98 (262)
T 2rcy_A 78 IKPYLSSKLLISICGGLNIGK 98 (262)
T ss_dssp SGGGCTTCEEEECCSSCCHHH
T ss_pred HHHhcCCCEEEEECCCCCHHH
Confidence 7543 2345666778887643
No 88
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.68 E-value=0.0001 Score=69.49 Aligned_cols=89 Identities=17% Similarity=0.117 Sum_probs=64.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceec-------C---eeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHL-------D---LPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~-------G---ip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..+|+|+|++|..|+...+.|.++ .+++++..+....|..+. | +. +.+++++ . ++|++++++|..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~~-~--~vDvV~~a~g~~ 79 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEKL-E--PADILVLALPHG 79 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGGC-C--CCSEEEECCCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhHh-c--CCCEEEEcCCcH
Confidence 468999999999999999988876 567876666543333222 1 11 2234333 2 499999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
.+.+.++.+.++|++ ++..+.-|.
T Consensus 80 ~s~~~a~~~~~aG~~-VId~Sa~~r 103 (345)
T 2ozp_A 80 VFAREFDRYSALAPV-LVDLSADFR 103 (345)
T ss_dssp HHHHTHHHHHTTCSE-EEECSSTTS
T ss_pred HHHHHHHHHHHCCCE-EEEcCcccc
Confidence 999999999999998 444566564
No 89
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.68 E-value=0.00016 Score=66.11 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=73.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--ecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--HLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~~ 105 (306)
.++|+|||. |.+|+...+.|.+.|++++ ..|++.... . -.|+..+.+++++.+ .|++++++|. ..+.++++
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~ 89 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVT-VYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVG 89 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEE-EECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHH
Confidence 468999998 9999999999999999965 556553111 1 247788889999875 8999999995 56677777
Q ss_pred HHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 106 EALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 106 e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
++... .-..+++-.+.......+++. +..++.|+.++.
T Consensus 90 ~l~~~l~~g~ivv~~st~~~~~~~~~~-~~~~~~g~~~~~ 128 (296)
T 3qha_A 90 ELAGHAKPGTVIAIHSTISDTTAVELA-RDLKARDIHIVD 128 (296)
T ss_dssp HHHTTCCTTCEEEECSCCCHHHHHHHH-HHHGGGTCEEEE
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHH-HHHHHcCCEEEe
Confidence 77653 223344333443333333333 345667877664
No 90
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.68 E-value=5.6e-05 Score=67.66 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=69.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc----eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK----THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
++|+|+|+ |++|+...+.+.+.|++++..++++.... +..|+.++.+++++.+. .|++++++|+..+.+++++
T Consensus 11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~Dvvi~av~~~~~~~v~~~ 87 (266)
T 3d1l_A 11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPY--AKLYIVSLKDSAFAELLQG 87 (266)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSC--CSEEEECCCHHHHHHHHHH
T ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcC--CCEEEEecCHHHHHHHHHH
Confidence 57999999 99999999999888998666777753100 11277888888887665 9999999999998888887
Q ss_pred HHHc--CCCEEEEecCCCChhH
Q psy8894 107 ALDA--EMPLIVCITEGIPQLD 126 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t~Gf~e~~ 126 (306)
+... .=+.++..++|++.+.
T Consensus 88 l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HHTTCCTTCEEEECCTTSCGGG
T ss_pred HHhhcCCCcEEEECCCCCchHH
Confidence 7652 1234555677887544
No 91
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.67 E-value=0.00012 Score=66.73 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=71.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~~ 105 (306)
.++|+|+|+ |++|....+.|.+.|++++ ..|++.... ...|+..+.+++++.+. .|++++++|.. .+.+++.
T Consensus 3 m~~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~ 78 (302)
T 2h78_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQSAVDGLVAAGASAARSARDAVQG--ADVVISMLPASQHVEGLYL 78 (302)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEECSSHHHHHTT--CSEEEECCSCHHHHHHHHH
T ss_pred CCEEEEEee-cHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHCCCeEcCCHHHHHhC--CCeEEEECCCHHHHHHHHc
Confidence 468999999 9999999999999999865 667653100 12378888899998875 89999999854 4555665
Q ss_pred ---HHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 106 ---EALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 106 ---e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
+..+. .-..+++-++.......+++. +..++.|++++
T Consensus 79 ~~~~~~~~l~~~~~vi~~st~~~~~~~~l~-~~~~~~g~~~~ 119 (302)
T 2h78_A 79 DDDGLLAHIAPGTLVLECSTIAPTSARKIH-AAARERGLAML 119 (302)
T ss_dssp SSSCGGGSSCSSCEEEECSCCCHHHHHHHH-HHHHHTTCCEE
T ss_pred CchhHHhcCCCCcEEEECCCCCHHHHHHHH-HHHHHcCCEEE
Confidence 44332 223344333333333333333 34456677665
No 92
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.66 E-value=4e-05 Score=75.27 Aligned_cols=118 Identities=11% Similarity=0.137 Sum_probs=80.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc------CCeEEEeeCCCCCCc---eecCeecc----CCHHhhhhcCCCcEEEEecCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY------GTKVVGGVSPGKGGK---THLDLPVF----NTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~------g~~vv~~VnP~~~g~---~i~Gip~y----~sl~el~~~~~iDlavi~vp~ 97 (306)
++|+|||. |+||....++|++. |++++...+...... ...|+... .+++|+... .|++++++|+
T Consensus 55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~--ADVVILaVP~ 131 (525)
T 3fr7_A 55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSG--SDLVLLLISD 131 (525)
T ss_dssp SEEEEECC-TTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHH--CSEEEECSCH
T ss_pred CEEEEEeE-hHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhc--CCEEEECCCh
Confidence 78999998 99999999999998 998664554432111 23577652 578888876 8999999999
Q ss_pred hhHHHHHHHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCcee
Q psy8894 98 PGAAKAIHEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGII 151 (306)
Q Consensus 98 ~~~~~~~~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~ 151 (306)
....+++++.... .-..++.++.||+-...++.....-+...+-.+-||+.|-.
T Consensus 132 ~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 132 AAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPS 186 (525)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHH
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchh
Confidence 9888888876542 34456789999864332210001112223455579998876
No 93
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.64 E-value=4.7e-05 Score=67.88 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=66.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---HLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
.++|+|+|+ |++|+...+.+.+.|+++ ...|++... +. ..|+..+.+++++... +|++++++|+..+.++++
T Consensus 3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~D~Vi~~v~~~~~~~v~~ 78 (259)
T 2ahr_A 3 AMKIGIIGV-GKMASAIIKGLKQTPHEL-IISGSSLERSKEIAEQLALPYAMSHQDLIDQ--VDLVILGIKPQLFETVLK 78 (259)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTSSCEE-EEECSSHHHHHHHHHHHTCCBCSSHHHHHHT--CSEEEECSCGGGHHHHHT
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeE-EEECCCHHHHHHHHHHcCCEeeCCHHHHHhc--CCEEEEEeCcHhHHHHHH
Confidence 468999998 999999999998888765 467765310 11 2378888899888765 999999999998888887
Q ss_pred HHHHcCCCEEEEecCCCChhH
Q psy8894 106 EALDAEMPLIVCITEGIPQLD 126 (306)
Q Consensus 106 e~~~~Gi~~vvi~t~Gf~e~~ 126 (306)
++. .|. .++..+.|.+.+.
T Consensus 79 ~l~-~~~-~vv~~~~~~~~~~ 97 (259)
T 2ahr_A 79 PLH-FKQ-PIISMAAGISLQR 97 (259)
T ss_dssp TSC-CCS-CEEECCTTCCHHH
T ss_pred Hhc-cCC-EEEEeCCCCCHHH
Confidence 653 443 3444556787544
No 94
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.61 E-value=9.2e-05 Score=69.27 Aligned_cols=161 Identities=14% Similarity=0.070 Sum_probs=94.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-------CCeEEEeeCCCCCC--ce-----------ecC-ee--ccCCHHhhhhc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-------GTKVVGGVSPGKGG--KT-----------HLD-LP--VFNTVKEARDA 85 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-------g~~vv~~VnP~~~g--~~-----------i~G-ip--~y~sl~el~~~ 85 (306)
++.+|+|+|+ |++|+...+.+.+. ++++++..|.+... .. -.| ++ .| +..++...
T Consensus 3 k~irVgIiG~-G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~ 80 (325)
T 3ing_A 3 KEIRIILMGT-GNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG 80 (325)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT
T ss_pred ceEEEEEEcC-cHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC
Confidence 3578999998 99999988877653 56688887765310 00 012 22 23 56666655
Q ss_pred CCCcEEEEecCchh----HHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccccccCC
Q psy8894 86 TGAEATVIYVPPPG----AAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQCKIGIM 161 (306)
Q Consensus 86 ~~iDlavi~vp~~~----~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~~~~~~ 161 (306)
.++|++++++|+.. +.+.+.+|+++|++.+. -..+.-.++..++ .++|+++|..+.=.-+.|--.|.....-
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVt-aNK~~la~~~~eL-~~lA~~~g~~~~~Ea~vg~giPii~~l~-- 156 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVT-ANKSGLANKWHDI-MDSANQNSKYIRYEATVAGGVPLFSVLD-- 156 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEE-CCCHHHHHHHHHH-HHHHHHHTCCEECGGGSSTTSCCHHHHH--
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEE-cCchhHHHHHHHH-HHHHHHcCCeEEEEeeecccCHHHHHHH--
Confidence 57999999999753 36899999999998533 2333222233344 4688999987754443333333211000
Q ss_pred CCCCCCCCCEEEEe--cChhhHHHHHHHHHhCCCceEEEE
Q psy8894 162 PGHIHQRGCVGVVS--RSGTLTYEAVHQTTQVGLGQTLCV 199 (306)
Q Consensus 162 ~~~~~~~G~va~vS--qSG~~~~~~~~~~~~~g~g~s~~v 199 (306)
.....+.|.-|. .||+... +++.. +.|..|+.++
T Consensus 157 --~~l~g~~I~~i~Gi~nGT~ny-il~~m-~~g~~f~~~l 192 (325)
T 3ing_A 157 --YSILPSKVKRFRGIVSSTINY-VIRNM-ANGRSLRDVV 192 (325)
T ss_dssp --HTCTTCCEEEEEEECCHHHHH-HHHHH-HTTCCHHHHH
T ss_pred --HHhhCCCeeEEEEEEEeeeeE-Eeecc-cCCCCHHHHH
Confidence 012335565554 6777644 44433 5566555443
No 95
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.60 E-value=0.00017 Score=66.39 Aligned_cols=109 Identities=19% Similarity=0.195 Sum_probs=72.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~~ 105 (306)
.++|+|||. |+||+...++|.+.|++++ ..|++.... .-.|...+.+++++.+. .|++++++|... +.+++.
T Consensus 9 ~~~IgiIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~e~~~~--aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 9 EFDVSVIGL-GAMGTIMAQVLLKQGKRVA-IWNRSPGKAAALVAAGAHLCESVKAALSA--SPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp SCSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTCEECSSHHHHHHH--SSEEEECCSSHHHHHHHHT
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHCCCeecCCHHHHHhc--CCEEEEEeCCHHHHHHHhc
Confidence 468999999 9999999999999999865 567653100 12377888899998876 999999999765 566654
Q ss_pred --HHHHcCC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 106 --EALDAEM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 106 --e~~~~Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
.+....- +.++..++ .+....+++. +..++.|++++.
T Consensus 85 ~~~l~~~~~g~ivid~st-~~~~~~~~l~-~~~~~~g~~~vd 124 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTT-NAQDEGLALQ-GLVNQAGGHYVK 124 (306)
T ss_dssp STTHHHHTTTCEEEECCC-CCTTHHHHHH-HHHHHTTCEEEE
T ss_pred ccchhhccCCCEEEECCC-CCHHHHHHHH-HHHHHcCCeEEe
Confidence 3322222 33444444 3333334443 345677887664
No 96
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.60 E-value=0.00015 Score=65.81 Aligned_cols=109 Identities=12% Similarity=0.073 Sum_probs=71.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI-- 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~-- 104 (306)
++|+|+|+ |++|+...+.|.+.|+++. ..|++.... . -.|+....+++++.+. .|++++++|.. .+.+++
T Consensus 2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~~--advvi~~v~~~~~~~~v~~~ 77 (287)
T 3pdu_A 2 TTYGFLGL-GIMGGPMAANLVRAGFDVT-VWNRNPAKCAPLVALGARQASSPAEVCAA--CDITIAMLADPAAAREVCFG 77 (287)
T ss_dssp CCEEEECC-STTHHHHHHHHHHHTCCEE-EECSSGGGGHHHHHHTCEECSCHHHHHHH--CSEEEECCSSHHHHHHHHHS
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHHc--CCEEEEEcCCHHHHHHHHcC
Confidence 47999998 9999999999999999865 566654111 1 2377888899998876 89999999986 566666
Q ss_pred -HHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 -HEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 -~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
++..+. .-..+++-++.......+++. +..++.|++++.
T Consensus 78 ~~~l~~~l~~g~~vv~~st~~~~~~~~~~-~~~~~~g~~~~~ 118 (287)
T 3pdu_A 78 ANGVLEGIGGGRGYIDMSTVDDETSTAIG-AAVTARGGRFLE 118 (287)
T ss_dssp TTCGGGTCCTTCEEEECSCCCHHHHHHHH-HHHHHTTCEEEE
T ss_pred chhhhhcccCCCEEEECCCCCHHHHHHHH-HHHHHcCCEEEE
Confidence 444432 122333333333333333333 345667877664
No 97
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.58 E-value=0.00064 Score=62.48 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=72.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC--CCc-eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH-HH-H
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK--GGK-THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK-AI-H 105 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~--~g~-~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~-~~-~ 105 (306)
+||++||. |+||....++|.+.||+++ +.|++. ... .-.|.....|+.|+.+. .|++++++|...+.. ++ .
T Consensus 6 ~kIgfIGL-G~MG~~mA~~L~~~G~~V~-v~dr~~~~~~~l~~~G~~~~~s~~e~~~~--~dvvi~~l~~~~~~~~v~~~ 81 (297)
T 4gbj_A 6 EKIAFLGL-GNLGTPIAEILLEAGYELV-VWNRTASKAEPLTKLGATVVENAIDAITP--GGIVFSVLADDAAVEELFSM 81 (297)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EC-------CTTTTTTCEECSSGGGGCCT--TCEEEECCSSHHHHHHHSCH
T ss_pred CcEEEEec-HHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCeEeCCHHHHHhc--CCceeeeccchhhHHHHHHH
Confidence 47999999 9999999999999999975 445432 111 12478888999999876 999999999876544 32 2
Q ss_pred HHHH-cCCCEEEE-ecCCCChhHHHHHHHHHHHhcCCeEE-ccCC
Q psy8894 106 EALD-AEMPLIVC-ITEGIPQLDMVKVKHRLIRQSKSRLI-GPNC 147 (306)
Q Consensus 106 e~~~-~Gi~~vvi-~t~Gf~e~~~~~~~~~~ar~~gi~ii-GPNc 147 (306)
+... ..-..+++ .++. +.+..+++. +.++++|++++ .|-+
T Consensus 82 ~~~~~~~~~~iiid~sT~-~p~~~~~~~-~~~~~~g~~~ldapVs 124 (297)
T 4gbj_A 82 ELVEKLGKDGVHVSMSTI-SPETSRQLA-QVHEWYGAHYVGAPIF 124 (297)
T ss_dssp HHHHHHCTTCEEEECSCC-CHHHHHHHH-HHHHHTTCEEEECCEE
T ss_pred HHHhhcCCCeEEEECCCC-ChHHHHHHH-HHHHhcCCceecCCcC
Confidence 2222 23333444 4444 344444443 35678888777 4444
No 98
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00017 Score=66.42 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=73.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI- 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~- 104 (306)
.++|+|||+ |++|+...+.|.+.|++++ ..|++.... . -.|+..+.+++++.+. .|++++++|.. .+.+++
T Consensus 21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVT-VWNRTLSKCDELVEHGASVCESPAEVIKK--CKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeEcCCHHHHHHh--CCEEEEEcCCHHHHHHHHh
Confidence 468999999 9999999999999999865 667654111 1 2477888899998876 89999999975 555555
Q ss_pred --HHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 --HEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 --~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+++... .-..+++-++..+....+++. +..++.|+.++.
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~-~~~~~~g~~~v~ 138 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKIN-EAITGKGGRFVE 138 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHH-HHHHHTTCEEEE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHH-HHHHHcCCEEEe
Confidence 443332 222334434444444333333 345677887765
No 99
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.56 E-value=0.00026 Score=64.01 Aligned_cols=108 Identities=10% Similarity=0.096 Sum_probs=68.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~~ 105 (306)
+++|+|+|+ |++|+...+.|.+.|++++ .+| +... +. -.|+..+.+++++.+. .|++++++|... +.+++.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~-~~~~~~~~~~~g~~~~~~~~~~~~~--~D~vi~~vp~~~~~~~v~~ 77 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLARAGHQLH-VTT-IGPVADELLSLGAVNVETARQVTEF--ADIIFIMVPDTPQVEDVLF 77 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHHTTCEEE-ECC-SSCCCHHHHTTTCBCCSSHHHHHHT--CSEEEECCSSHHHHHHHHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEE-EEc-CHHHHHHHHHcCCcccCCHHHHHhc--CCEEEEECCCHHHHHHHHh
Confidence 368999998 9999999999998999864 555 4311 11 1377788899888765 999999998876 455554
Q ss_pred ---HHHH-cCCCEEE-EecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 106 ---EALD-AEMPLIV-CITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 106 ---e~~~-~Gi~~vv-i~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+... ..-..++ ..++|. ....+++. +..++.+++++.
T Consensus 78 ~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~-~~~~~~g~~~~~ 119 (295)
T 1yb4_A 78 GEHGCAKTSLQGKTIVDMSSIS-PIETKRFA-QRVNEMGADYLD 119 (295)
T ss_dssp STTSSTTSCCTTEEEEECSCCC-HHHHHHHH-HHHHTTTEEEEE
T ss_pred CchhHhhcCCCCCEEEECCCCC-HHHHHHHH-HHHHHcCCeEEE
Confidence 2322 1223333 345553 22233333 344556777663
No 100
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.51 E-value=7.8e-05 Score=65.30 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=64.8
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e---ecCeeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T---HLDLPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~---i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
.+.+.++|+|+|+ |++|+...+.+.+.|++++...+++.... . ..|+..+.+..+.... .|++++++|+..+.
T Consensus 19 ~~m~mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~--aDvVilavp~~~~~ 95 (220)
T 4huj_A 19 YFQSMTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQ--ADVVILAVPYDSIA 95 (220)
T ss_dssp TGGGSCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTT--SSEEEEESCGGGHH
T ss_pred hhhcCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhc--CCEEEEeCChHHHH
Confidence 4444578999997 99999999999999999764466653111 1 1255554444444443 89999999999999
Q ss_pred HHHHHHHHcCCCEEEEecCCCC
Q psy8894 102 KAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
++++++....-+.++-.+.|+.
T Consensus 96 ~v~~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 96 DIVTQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp HHHTTCSCCTTCEEEECCCCBC
T ss_pred HHHHHhhccCCCEEEEcCCCCC
Confidence 9988764322234555666763
No 101
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.50 E-value=0.00064 Score=61.64 Aligned_cols=109 Identities=13% Similarity=0.205 Sum_probs=70.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~ 104 (306)
++++|+|+|+ |++|+...+.+.+.|++++ .+|++... +. -.|+..+.+++++... .|++++++|... +.+++
T Consensus 3 ~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~D~vi~~vp~~~~~~~v~ 78 (301)
T 3cky_A 3 KSIKIGFIGL-GAMGKPMAINLLKEGVTVY-AFDLMEANVAAVVAQGAQACENNQKVAAA--SDIIFTSLPNAGIVETVM 78 (301)
T ss_dssp -CCEEEEECC-CTTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHTTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeecCCHHHHHhC--CCEEEEECCCHHHHHHHH
Confidence 4578999998 9999999999998899865 66665310 11 1277788889888766 999999998654 55565
Q ss_pred H---HHHH-cCC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 105 H---EALD-AEM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 105 ~---e~~~-~Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
. +... ..- +.++..++|.++ ..+++. +..++.+++++
T Consensus 79 ~~~~~l~~~l~~~~~vv~~~~~~~~-~~~~l~-~~~~~~g~~~~ 120 (301)
T 3cky_A 79 NGPGGVLSACKAGTVIVDMSSVSPS-STLKMA-KVAAEKGIDYV 120 (301)
T ss_dssp HSTTCHHHHSCTTCEEEECCCCCHH-HHHHHH-HHHHHTTCEEE
T ss_pred cCcchHhhcCCCCCEEEECCCCCHH-HHHHHH-HHHHHcCCeEE
Confidence 3 3332 221 344556666632 222332 33455677776
No 102
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=97.46 E-value=0.0039 Score=61.20 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=136.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC--CceecCeeccCCHHhhhhcCCCcEEEEecCc--h-hHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG--GKTHLDLPVFNTVKEARDATGAEATVIYVPP--P-GAAKA 103 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~--g~~i~Gip~y~sl~el~~~~~iDlavi~vp~--~-~~~~~ 103 (306)
++-+|++|.-||.++......+.+.|.-.-..|.-... ..++.|+..-+-|+-+.++.+.++++++.-. + ...+.
T Consensus 111 ~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f 190 (480)
T 3dmy_A 111 PEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKI 190 (480)
T ss_dssp CEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHH
Confidence 47899999999998888877777764433333433220 0123444333334444444457888887631 2 12445
Q ss_pred HHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCccc--------cccCCC-----CCCCCCCC
Q psy8894 104 IHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQC--------KIGIMP-----GHIHQRGC 170 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~~--------~~~~~~-----~~~~~~G~ 170 (306)
++.+-+.+.+.| .+-.|-++.. .|+. |++..... ...... ...+.-.+
T Consensus 191 ~~~ar~~~KPVV-~~k~Grs~~g--------~r~~----------Gvirv~~~~el~~~a~~l~~~~~~~~~qp~~~G~r 251 (480)
T 3dmy_A 191 VNAMKATGKPTV-ALFLGYTPAV--------ARDE----------NVWFASSLDEAARLACLLSRVTARRNAIAPVSSGF 251 (480)
T ss_dssp HHHHHHHCSCEE-EEETTCCCSS--------SEET----------TEEEESSHHHHHHHHHHHHHHHHHHHHHCCCSCCE
T ss_pred HHHHHhCCCCEE-EEEeCCCCcc--------cccC----------CEEEECCHHHHHHHHHHHhcCccccccCCCCCCCe
Confidence 555545666654 4566665543 0111 12111100 000000 00123346
Q ss_pred EEEEecChhhHHHHHHHHHhCCCceE----------------EEEe-------cCCCCCCCC----CHHHHHHHhhcCCC
Q psy8894 171 VGVVSRSGTLTYEAVHQTTQVGLGQT----------------LCVG-------IGGDPFNGT----NFIDCLEVFLKDPE 223 (306)
Q Consensus 171 va~vSqSG~~~~~~~~~~~~~g~g~s----------------~~vs-------~Gn~~~~dv----~~~d~l~~l~~D~~ 223 (306)
|++||-||+++....+.+.+ |+++. ..+. .||- .|+ .+.+.++-+.+||+
T Consensus 252 vaivtn~Gg~gvlaaD~~~~-gl~l~~ls~~t~~~l~~~~~~~l~~~lp~~~s~~NP--vD~~d~~~~~~al~~~l~D~~ 328 (480)
T 3dmy_A 252 ICGLYTGGTLAAEAAGLLAG-HLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRP--HPMIDPTLRNQLIADLGAKPQ 328 (480)
T ss_dssp EEEEESCHHHHHHHHHHHHH-HTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSC--CTTTCCHHHHHHHHHGGGCTT
T ss_pred EEEEECCHHHHHHHHHHHHh-CCCCCCCCHHHHhhhhhhhhccHHHhCcchhhccCC--cCCCCHHHHHHHHHHHhcCCC
Confidence 99999999999999998877 66653 3333 4454 343 26778889999999
Q ss_pred ccEEEE-EEeeCC-----------------CCC--CCc--EEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHc
Q psy8894 224 TKGIIL-IGEIGG-----------------GPN--AKP--VVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKA 281 (306)
Q Consensus 224 t~~I~l-y~E~~~-----------------~~~--~KP--Vvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~a 281 (306)
+-+|++ |+-+.+ ... +|| ++++-.|.... . .......+.|+++
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~-~--------------~~~~~~~~~L~~a 393 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERD-P--------------QCRSQQIATLEDA 393 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTS-T--------------TCHHHHHHHHHHT
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccc-h--------------hhHHHHHHHHHhC
Confidence 998877 231111 122 799 45555555311 0 1222235789999
Q ss_pred CCeEeCCHhHHHHHHHHHHH
Q psy8894 282 GVIVTRSPAQMGNELLKEMK 301 (306)
Q Consensus 282 Gvi~~~~~~el~~~~~~~~~ 301 (306)
|+..-+++++-..++..++.
T Consensus 394 GIp~f~spe~Av~a~~~l~~ 413 (480)
T 3dmy_A 394 GIAVVSSLPEATLLAAALIH 413 (480)
T ss_dssp TCEECSSHHHHHHHHHHHTS
T ss_pred CCcccCCHHHHHHHHHHHHh
Confidence 99999999998888876654
No 103
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.45 E-value=0.00016 Score=67.23 Aligned_cols=90 Identities=12% Similarity=0.053 Sum_probs=67.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH-c-CCeEEEeeCCCCCC--ce---ecCeec-cCCHHhhhhc---CCCcEEEEecCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE-Y-GTKVVGGVSPGKGG--KT---HLDLPV-FNTVKEARDA---TGAEATVIYVPP 97 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~-~-g~~vv~~VnP~~~g--~~---i~Gip~-y~sl~el~~~---~~iDlavi~vp~ 97 (306)
++.+|+|+|+ |..|+...+.+.+ . +.++++.++++... .+ ..|.+. +.+++++.+. .++|++++++|.
T Consensus 3 ~~irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp SCEEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 4679999996 9999998888855 4 77888777766321 11 346653 5667887543 359999999999
Q ss_pred hhHHHHHHHHHHc--CCCEEEEecC
Q psy8894 98 PGAAKAIHEALDA--EMPLIVCITE 120 (306)
Q Consensus 98 ~~~~~~~~e~~~~--Gi~~vvi~t~ 120 (306)
+.+.+.+.+++++ |.+ |++.++
T Consensus 82 ~~h~~~a~~al~a~~Gk~-Vi~ekp 105 (312)
T 1nvm_B 82 SAHVQNEALLRQAKPGIR-LIDLTP 105 (312)
T ss_dssp HHHHHHHHHHHHHCTTCE-EEECST
T ss_pred HHHHHHHHHHHHhCCCCE-EEEcCc
Confidence 9999999999999 988 455454
No 104
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.45 E-value=0.0005 Score=63.69 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=64.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCCCc---eecCe--eccCCHHh-hhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKGGK---THLDL--PVFNTVKE-ARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~g~---~i~Gi--p~y~sl~e-l~~~~~iDlavi~vp~~~~~~ 102 (306)
++|+|||+ |.+|....+.+.+.|+ +++ +.|++.... ...|+ ..+.++++ +... .|++++++|+....+
T Consensus 34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~-~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~--aDvVilavp~~~~~~ 109 (314)
T 3ggo_A 34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINPESISKAVDLGIIDEGTTSIAKVEDFS--PDFVMLSSPVRTFRE 109 (314)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHTTSCSEEESCTTGGGGGC--CSEEEECSCGGGHHH
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCCCEEE-EEECCHHHHHHHHHCCCcchhcCCHHHHhhcc--CCEEEEeCCHHHHHH
Confidence 68999998 9999999999999999 654 677764100 11344 45677887 6655 999999999999999
Q ss_pred HHHHHHHc-CCCEEEEecCCCC
Q psy8894 103 AIHEALDA-EMPLIVCITEGIP 123 (306)
Q Consensus 103 ~~~e~~~~-Gi~~vvi~t~Gf~ 123 (306)
+++++... .-..+++-.++..
T Consensus 110 vl~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 110 IAKKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHHHSCTTCEEEECCSCC
T ss_pred HHHHHhhccCCCcEEEECCCCc
Confidence 99888763 4444554334443
No 105
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.44 E-value=8.6e-05 Score=68.99 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cC-----------eeccCCHHhhhhcCCCcEEEEe
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LD-----------LPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~G-----------ip~y~sl~el~~~~~iDlavi~ 94 (306)
-|.+|+|+|+ |.||......|.+.|+++. .+++...- +.+ .| +++..+.++ .+. .|+++++
T Consensus 13 ~~~kI~iIG~-G~mG~ala~~L~~~G~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~--aDvVil~ 87 (335)
T 1z82_A 13 MEMRFFVLGA-GSWGTVFAQMLHENGEEVI-LWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKK--EDILVIA 87 (335)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT--TEEEEEC
T ss_pred cCCcEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC--CCEEEEE
Confidence 3789999999 9999999999999999864 56654200 111 12 456667777 443 8999999
Q ss_pred cCchhHHHHHHHHHHcCCCEEEEecCCCChh
Q psy8894 95 VPPPGAAKAIHEALDAEMPLIVCITEGIPQL 125 (306)
Q Consensus 95 vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~ 125 (306)
+|+..+.++++++.. .=+.++.++.|++.+
T Consensus 88 vk~~~~~~v~~~l~~-~~~~vv~~~nGi~~~ 117 (335)
T 1z82_A 88 IPVQYIREHLLRLPV-KPSMVLNLSKGIEIK 117 (335)
T ss_dssp SCGGGHHHHHTTCSS-CCSEEEECCCCCCTT
T ss_pred CCHHHHHHHHHHhCc-CCCEEEEEeCCCCCC
Confidence 999888888876543 223566677788653
No 106
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.39 E-value=0.00043 Score=62.73 Aligned_cols=107 Identities=13% Similarity=0.216 Sum_probs=70.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecC-chhHHHHH--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVP-PPGAAKAI-- 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp-~~~~~~~~-- 104 (306)
++|+|+|+ |.+|+...+.+.+.|+++. .+|++... +. -.|+..+.+++++.+. .|++++++| +..+.+++
T Consensus 6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~D~vi~~v~~~~~~~~~~~~ 81 (299)
T 1vpd_A 6 MKVGFIGL-GIMGKPMSKNLLKAGYSLV-VSDRNPEAIADVIAAGAETASTAKAIAEQ--CDVIITMLPNSPHVKEVALG 81 (299)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHHHS
T ss_pred ceEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHCCCeecCCHHHHHhC--CCEEEEECCCHHHHHHHHhC
Confidence 48999998 9999999999999999864 66765310 11 1377888899887765 999999999 45556666
Q ss_pred -HHHHH---cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 -HEALD---AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 -~e~~~---~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
++... .| +.++..++|.+. ..+++. +..++.|+.++.
T Consensus 82 ~~~l~~~l~~~-~~vv~~s~~~~~-~~~~l~-~~~~~~g~~~~~ 122 (299)
T 1vpd_A 82 ENGIIEGAKPG-TVLIDMSSIAPL-ASREIS-DALKAKGVEMLD 122 (299)
T ss_dssp TTCHHHHCCTT-CEEEECSCCCHH-HHHHHH-HHHHTTTCEEEE
T ss_pred cchHhhcCCCC-CEEEECCCCCHH-HHHHHH-HHHHHcCCeEEE
Confidence 33332 33 234545666532 223332 344566776664
No 107
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.39 E-value=0.00043 Score=62.64 Aligned_cols=110 Identities=13% Similarity=0.132 Sum_probs=69.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCC-ce--ecCe--eccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGG-KT--HLDL--PVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g-~~--i~Gi--p~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.++|+|||+ |++|+...+.+.+. +++++ .+|++... +. -.|. ..+.+++++.+. .|++++++|+....+
T Consensus 6 ~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~--aDvVilavp~~~~~~ 81 (290)
T 3b1f_A 6 EKTIYIAGL-GLIGASLALGIKRDHPHYKIV-GYNRSDRSRDIALERGIVDEATADFKVFAAL--ADVIILAVPIKKTID 81 (290)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEE-EECSSHHHHHHHHHTTSCSEEESCTTTTGGG--CSEEEECSCHHHHHH
T ss_pred cceEEEEee-CHHHHHHHHHHHhCCCCcEEE-EEcCCHHHHHHHHHcCCcccccCCHHHhhcC--CCEEEEcCCHHHHHH
Confidence 368999998 99999998888887 56654 67765310 11 1344 355677776655 899999999999999
Q ss_pred HHHHHHHc--CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 103 AIHEALDA--EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 103 ~~~e~~~~--Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+++++... .-+.+++..++......+.+. +...+.+.++++
T Consensus 82 v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~-~~l~~~~~~~v~ 124 (290)
T 3b1f_A 82 FIKILADLDLKEDVIITDAGSTKYEIVRAAE-YYLKDKPVQFVG 124 (290)
T ss_dssp HHHHHHTSCCCTTCEEECCCSCHHHHHHHHH-HHHTTSSCEEEE
T ss_pred HHHHHHhcCCCCCCEEEECCCCchHHHHHHH-HhccccCCEEEE
Confidence 99887654 234455433443322222222 233333677775
No 108
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.39 E-value=0.00045 Score=63.94 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=68.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC----CeEEEeeCCCCC---Cce--ecCeeccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG----TKVVGGVSPGKG---GKT--HLDLPVFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g----~~vv~~VnP~~~---g~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
.++|+|||+ |+||......|.+.| +++. ..|++.. -+. ..|+.+..+..++... .|++++++|+..+
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~-v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~--aDvVilav~~~~~ 97 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIM-ASSPDMDLATVSALRKMGVKLTPHNKETVQH--SDVLFLAVKPHII 97 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCTTSHHHHHHHHHTCEEESCHHHHHHH--CSEEEECSCGGGH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCcceEE-EECCCccHHHHHHHHHcCCEEeCChHHHhcc--CCEEEEEeCHHHH
Confidence 357999999 999999999999988 6654 6676541 011 2377777788777765 8999999999999
Q ss_pred HHHHHHHHHc-CC-CEEEEecCCCChhH
Q psy8894 101 AKAIHEALDA-EM-PLIVCITEGIPQLD 126 (306)
Q Consensus 101 ~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~ 126 (306)
.++++++... .- +.++.++.|.+.+.
T Consensus 98 ~~vl~~l~~~l~~~~ivvs~s~gi~~~~ 125 (322)
T 2izz_A 98 PFILDEIGADIEDRHIVVSCAAGVTISS 125 (322)
T ss_dssp HHHHHHHGGGCCTTCEEEECCTTCCHHH
T ss_pred HHHHHHHHhhcCCCCEEEEeCCCCCHHH
Confidence 9999887543 22 34454667887544
No 109
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.39 E-value=0.00063 Score=62.33 Aligned_cols=109 Identities=14% Similarity=0.115 Sum_probs=70.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--ecCeeccCCHHhhhhcCCCcEEEEecC-chhHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--HLDLPVFNTVKEARDATGAEATVIYVP-PPGAAKAIH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--i~Gip~y~sl~el~~~~~iDlavi~vp-~~~~~~~~~ 105 (306)
.++|+|+|+ |++|+...+.+.+.|++++ .+|++.... . -.|+.++.+++++... .|++++++| +..+.+++.
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~DvVi~av~~~~~~~~v~~ 105 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVT-VWNRTAEKCDLFIQEGARLGRTPAEVVST--CDITFACVSDPKAAKDLVL 105 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSGGGGHHHHHTTCEECSCHHHHHHH--CSEEEECCSSHHHHHHHHH
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHcCCEEcCCHHHHHhc--CCEEEEeCCCHHHHHHHHc
Confidence 468999998 9999999999998899864 666653111 1 1367778888887765 899999999 677777766
Q ss_pred HHH---H-cCCC-EEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 106 EAL---D-AEMP-LIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 106 e~~---~-~Gi~-~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+.. + ..-. .++..++ ......+++. +...+.+.++++
T Consensus 106 ~~~~~~~~l~~~~~vv~~s~-~~~~~~~~l~-~~~~~~~~~~v~ 147 (316)
T 2uyy_A 106 GPSGVLQGIRPGKCYVDMST-VDADTVTELA-QVIVSRGGRFLE 147 (316)
T ss_dssp STTCGGGGCCTTCEEEECSC-CCHHHHHHHH-HHHHHTTCEEEE
T ss_pred CchhHhhcCCCCCEEEECCC-CCHHHHHHHH-HHHHHcCCEEEE
Confidence 431 1 2222 3333444 3333333333 234456777764
No 110
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.38 E-value=0.00012 Score=56.35 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=60.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCC-cee--cCeecc-------CCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGG-KTH--LDLPVF-------NTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g-~~i--~Gip~y-------~sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|+|+|+ |.+|+...+.+.+.| ++++ .++++... +.. .++..+ .++.++.. ++|+++.++|..
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVT-VADHDLAALAVLNRMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEE-EEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 368999999 999999999999999 7754 55544200 011 132222 12444444 499999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
....+++.|.+.|++.+. +++
T Consensus 81 ~~~~~~~~~~~~g~~~~~-~~~ 101 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHYFD-LTE 101 (118)
T ss_dssp GHHHHHHHHHHTTCEEEC-CCS
T ss_pred hhHHHHHHHHHhCCCEEE-ecC
Confidence 999999999999999754 453
No 111
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.35 E-value=3.9e-05 Score=73.83 Aligned_cols=87 Identities=10% Similarity=0.038 Sum_probs=68.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC--CCCCCceecCeeccCCHHhhhh--cCCCcEEEEecCchhHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS--PGKGGKTHLDLPVFNTVKEARD--ATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn--P~~~g~~i~Gip~y~sl~el~~--~~~iDlavi~vp~~~~~~~ 103 (306)
++.++++|+|| |..|+...+.+.+.|+++++.+| |...|..+.|+|++.. +++++ ..+++.+++++ ....++
T Consensus 50 ~~~~~v~IiGA-G~~G~~l~~~l~~~g~~ivgfiDdd~~~~g~~i~GipV~~~-~~l~~~~~~~~~~viiai--~~r~~i 125 (409)
T 2py6_A 50 GNATRLVILGT-KGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYYGLPIIST-DRFTELATHDRDLVALNT--CRYDGP 125 (409)
T ss_dssp GGGCEEEEECS-SSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEETTEEEECH-HHHHHHHHTCTTEEEEEC--CCSHHH
T ss_pred CCCCeEEEEeC-CHHHHHHHHHHHHCCCEEEEEEeCCcccccCEECCEEEECH-HHHHHHHhCCCCEEEEec--cHHHHH
Confidence 66678999999 99999998877777999998887 4555678999999974 45543 34578888888 345788
Q ss_pred HHHHHHcCCCEEEEe
Q psy8894 104 IHEALDAEMPLIVCI 118 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~ 118 (306)
++.+.+.|++.+|.|
T Consensus 126 ~~~l~~~g~~~il~f 140 (409)
T 2py6_A 126 KRFFDQICRTHGIPH 140 (409)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCEEEec
Confidence 888888887777766
No 112
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.34 E-value=0.0003 Score=66.12 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=65.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCC---CCCceec-------C---eeccC--CHHhhhhcCCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPG---KGGKTHL-------D---LPVFN--TVKEARDATGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~---~~g~~i~-------G---ip~y~--sl~el~~~~~iDlavi~ 94 (306)
.+|+|+|++|..|+...+.|.++ +++++.....+ ..|+.+. | +++.+ +.+++.+ ++|+++.|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~--~~Dvvf~a 82 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSP--GVDVVFLA 82 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCT--TCSEEEEC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhc--CCCEEEEC
Confidence 68999999999999999988885 77877654433 4444322 2 22221 3444433 49999999
Q ss_pred cCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 95 VPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 95 vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
+|...+.+.+.++.++|++.|- .++-|.
T Consensus 83 ~p~~~s~~~~~~~~~~g~~vID-lSa~fR 110 (337)
T 3dr3_A 83 TAHEVSHDLAPQFLEAGCVVFD-LSGAFR 110 (337)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEE-CSSTTS
T ss_pred CChHHHHHHHHHHHHCCCEEEE-cCCccc
Confidence 9999999999999999998554 677774
No 113
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.34 E-value=0.00091 Score=60.45 Aligned_cols=107 Identities=14% Similarity=0.152 Sum_probs=69.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHHHHH
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAIHEA 107 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~~e~ 107 (306)
+|+|+|+ |++|+...+.+.+.|++++ .+|++... +. -.|+.++.+++++... .|++++++|.. .+.+++++.
T Consensus 2 ~i~iiG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~Dvvi~~vp~~~~~~~v~~~~ 77 (296)
T 2gf2_A 2 PVGFIGL-GNMGNPMAKNLMKHGYPLI-IYDVFPDACKEFQDAGEQVVSSPADVAEK--ADRIITMLPTSINAIEAYSGA 77 (296)
T ss_dssp CEEEECC-STTHHHHHHHHHHTTCCEE-EECSSTHHHHHHHTTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHHHHST
T ss_pred eEEEEec-cHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCeecCCHHHHHhc--CCEEEEeCCCHHHHHHHHhCc
Confidence 6999999 9999999999999999865 66765310 11 1377888899887765 89999999754 556666542
Q ss_pred ---HH-cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 108 ---LD-AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 108 ---~~-~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.. ..-..+++-++|.+....+++.+ ..++.+..++
T Consensus 78 ~~~~~~l~~~~~vv~~s~~~~~~~~~~~~-~~~~~g~~~~ 116 (296)
T 2gf2_A 78 NGILKKVKKGSLLIDSSTIDPAVSKELAK-EVEKMGAVFM 116 (296)
T ss_dssp TSGGGTCCTTCEEEECSCCCHHHHHHHHH-HHHHTTCEEE
T ss_pred hhHHhcCCCCCEEEECCCCCHHHHHHHHH-HHHHcCCEEE
Confidence 11 12223444477877665554433 3344565443
No 114
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.33 E-value=0.00018 Score=68.06 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=73.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc----CCeEEEeeCCCCCCcee---c-CeeccCCHHhhhhcC--------------
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY----GTKVVGGVSPGKGGKTH---L-DLPVFNTVKEARDAT-------------- 86 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~----g~~vv~~VnP~~~g~~i---~-Gip~y~sl~el~~~~-------------- 86 (306)
++.+|+|+|+ |.+|+...+.+.+. ++++++..+.+. ... . |++.|.++.++.+..
T Consensus 3 k~i~vgIiG~-G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~ 79 (358)
T 1ebf_A 3 KVVNVAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHL 79 (358)
T ss_dssp SEEEEEEECC-SHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHH
T ss_pred ceEEEEEEec-CHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHh
Confidence 4578999999 99999988888875 357887777543 222 1 677777777665431
Q ss_pred ----CCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCC-CC--hhHHHHHHHHHHHhcCCeEE
Q psy8894 87 ----GAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEG-IP--QLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 87 ----~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~G-f~--e~~~~~~~~~~ar~~gi~ii 143 (306)
.+|++|+|+|...+.+...+|+++|++. ++...+ ++ .++..++ . +|+++|+.+.
T Consensus 80 ~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhV-VtaNkkpla~~~~~~~eL-~-~A~~~gv~~~ 140 (358)
T 1ebf_A 80 KTSPKPVILVDNTSSAYIAGFYTKFVENGISI-ATPNKKAFSSDLATWKAL-F-SNKPTNGFVY 140 (358)
T ss_dssp TTCSSCEEEEECSCCHHHHTTHHHHHHTTCEE-ECCCCGGGSSCHHHHHHH-T-CCCTTCCCEE
T ss_pred hhccCCcEEEEcCCChHHHHHHHHHHHCCCeE-EecCcccccCCHHHHHHH-H-HHHHcCCEEE
Confidence 2379999999887777778999999884 321232 22 1233343 4 6788887654
No 115
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.32 E-value=0.00027 Score=66.08 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=65.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC--CCc--eec------------------CeeccCCHHhhhhcCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK--GGK--THL------------------DLPVFNTVKEARDATG 87 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~--~g~--~i~------------------Gip~y~sl~el~~~~~ 87 (306)
.+|+|+|+ |.+|+...+.+.+. ++++++..++.. .+. +.. ++++|.+.+++...
T Consensus 3 irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~-- 79 (334)
T 2czc_A 3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK-- 79 (334)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT--
T ss_pred cEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccC--
Confidence 58999999 99999999988876 778887665432 100 011 23677788888764
Q ss_pred CcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCC
Q psy8894 88 AEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 88 iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf 122 (306)
+|++++++|...+.+.++.++++|.+ |+ ++...
T Consensus 80 vDvV~~aTp~~~h~~~a~~~l~aGk~-Vi-~sap~ 112 (334)
T 2czc_A 80 VDIIVDATPGGIGAKNKPLYEKAGVK-AI-FQGGE 112 (334)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCE-EE-ECTTS
T ss_pred CCEEEECCCccccHHHHHHHHHcCCc-eE-eeccc
Confidence 99999999999999999999999966 55 35443
No 116
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.31 E-value=0.00039 Score=68.24 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=74.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee------cCeeccCCHHhhhhc-CCCcEEEEecCc-hhH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH------LDLPVFNTVKEARDA-TGAEATVIYVPP-PGA 100 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i------~Gip~y~sl~el~~~-~~iDlavi~vp~-~~~ 100 (306)
.++|+|+|+ |.||+...++|.+.|+++. ..|++... +++ .|+....+++++... ..+|++++++|+ ..+
T Consensus 15 ~~~IgvIGl-G~MG~~lA~~La~~G~~V~-v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 15 KQQIGVVGM-AVMGRNLALNIESRGYTVS-IFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred CCeEEEEcc-HHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 467999999 9999999999999999864 66765310 111 177788889887652 138999999999 578
Q ss_pred HHHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 101 AKAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 101 ~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.++++++... .- +.++..++|..+ +..++. +..++.|++++
T Consensus 93 ~~vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~-~~l~~~g~~~v 135 (480)
T 2zyd_A 93 DAAIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRN-RELSAEGFNFI 135 (480)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHH-HHHHHTTCEEE
T ss_pred HHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHH-HHHHHCCCCee
Confidence 8888877653 22 234445666543 223333 34456687766
No 117
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.30 E-value=0.00019 Score=67.34 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=69.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc---------CCeEEEeeCCCCCCc-eecCeeccCCHHhhhhcCCCcEEEEecCch-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY---------GTKVVGGVSPGKGGK-THLDLPVFNTVKEARDATGAEATVIYVPPP- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~---------g~~vv~~VnP~~~g~-~i~Gip~y~sl~el~~~~~iDlavi~vp~~- 98 (306)
+.+|+|+|+ |.+|+...+.+.+. ++++++..+.+.... .+....+|.+++++. + +|++++++|..
T Consensus 3 ~irvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~--iDvVve~t~~~~ 78 (332)
T 2ejw_A 3 ALKIALLGG-GTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-E--ADLVVEAMGGVE 78 (332)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-T--CSEEEECCCCSH
T ss_pred eeEEEEEcC-CHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-C--CCEEEECCCCcH
Confidence 568999999 99999888877664 467877777653111 122224677888888 4 99999999976
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhc
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQS 138 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~ 138 (306)
.+.+.+++|+++|++. ++-..+.-.++..++. ++|+++
T Consensus 79 ~a~~~~~~AL~aGKhV-VtaNkkpla~~~~eL~-~~A~~~ 116 (332)
T 2ejw_A 79 APLRLVLPALEAGIPL-ITANKALLAEAWESLR-PFAEEG 116 (332)
T ss_dssp HHHHHHHHHHHTTCCE-EECCHHHHHHSHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHcCCeE-EECCchhHHHHHHHHH-HHHHhC
Confidence 5688999999999994 4311111112233443 577776
No 118
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=97.28 E-value=0.0011 Score=63.72 Aligned_cols=110 Identities=24% Similarity=0.335 Sum_probs=85.7
Q ss_pred CCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEeeCC-----------
Q psy8894 167 QRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGG----------- 235 (306)
Q Consensus 167 ~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~~~----------- 235 (306)
..|+|++++-||+++...++.+...|.....++-+|+.+ ..-.+.+.++.+.+||++++|++++-+.-
T Consensus 246 l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a-~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 246 LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGA-KADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCC-CHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCC-CHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 569999999999999999999999999999999999984 23357778888899999999998654321
Q ss_pred ---CC--CCCcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHH
Q psy8894 236 ---GP--NAKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELL 297 (306)
Q Consensus 236 ---~~--~~KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~~~~~el~~~~~ 297 (306)
.. .+||||+--.|... ..-.+.|++.|+...+++++-...+.
T Consensus 325 ~a~~~~~~~kPvvv~~~G~~~--------------------~~~~~~l~~~gip~~~~~e~Aa~~~~ 371 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGTAE--------------------EEAKKLLEGKPVYMYPTSIEAAKVTV 371 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEECH--------------------HHHHHHTTTSSEEECSSHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEEccCCCH--------------------HHHHHHHHhCCCcccCCHHHHHHHHH
Confidence 12 37999998887532 12246778889888888777666554
No 119
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.28 E-value=0.00067 Score=66.52 Aligned_cols=109 Identities=9% Similarity=0.088 Sum_probs=72.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee-------cCeeccCCHHhhhhc-CCCcEEEEecCch-hH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH-------LDLPVFNTVKEARDA-TGAEATVIYVPPP-GA 100 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i-------~Gip~y~sl~el~~~-~~iDlavi~vp~~-~~ 100 (306)
++|+|||+ |.||+....+|.+.|+++. ..|++... +++ .|+..+.+++++.+. .++|++++++|+. .+
T Consensus 3 m~IgvIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v 80 (482)
T 2pgd_A 3 ADIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV 80 (482)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred CeEEEECh-HHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHH
Confidence 47999999 9999999999999999864 66765310 011 457778889988641 1399999999995 77
Q ss_pred HHHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 101 AKAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 101 ~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.++++++... .- +.++..++|... +..++. +..++.|+.++
T Consensus 81 ~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~-~~l~~~g~~~v 123 (482)
T 2pgd_A 81 DNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRC-RDLKDKGILFV 123 (482)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHH-HHHHHTTCEEE
T ss_pred HHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHH-HHHHHcCCeEe
Confidence 8888776542 22 334445566543 222332 33455677665
No 120
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.27 E-value=0.00024 Score=68.92 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=76.0
Q ss_pred cccccccccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC---CC-----ceecCeeccCCHHhhhhcC
Q psy8894 15 EEIYAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK---GG-----KTHLDLPVFNTVKEARDAT 86 (306)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~---~g-----~~i~Gip~y~sl~el~~~~ 86 (306)
+.+|++.. + +-+.++|||+|. |..|.+...||++.|.+++-++-|.. .+ .+..|..+++ ++|+...
T Consensus 25 ~~eF~~~~-~--~lkgK~IaVIGy-GsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~-~~eA~~~- 98 (491)
T 3ulk_A 25 RDEFADGA-S--YLQGKKVVIVGC-GAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGT-YEELIPQ- 98 (491)
T ss_dssp GGGGTTTT-G--GGTTSEEEEESC-SHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEE-HHHHGGG-
T ss_pred HHHhcchh-H--HHcCCEEEEeCC-ChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecC-HHHHHHh-
Confidence 44565544 3 334589999999 99999999999999999765655321 00 1356888886 8888776
Q ss_pred CCcEEEEecCchhHHHHHHHHHHc--CCCEEEEecCCCC
Q psy8894 87 GAEATVIYVPPPGAAKAIHEALDA--EMPLIVCITEGIP 123 (306)
Q Consensus 87 ~iDlavi~vp~~~~~~~~~e~~~~--Gi~~vvi~t~Gf~ 123 (306)
-|++++.+|.+...++.++ ++. .-...+.|+.||.
T Consensus 99 -ADvV~~L~PD~~q~~vy~~-I~p~lk~G~~L~faHGFn 135 (491)
T 3ulk_A 99 -ADLVINLTPDKQHSDVVRT-VQPLMKDGAALGYSHGFN 135 (491)
T ss_dssp -CSEEEECSCGGGHHHHHHH-HGGGSCTTCEEEESSCHH
T ss_pred -CCEEEEeCChhhHHHHHHH-HHhhCCCCCEEEecCccc
Confidence 8999999999988888876 553 3456778999994
No 121
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.27 E-value=0.00028 Score=62.60 Aligned_cols=92 Identities=17% Similarity=0.202 Sum_probs=66.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC----eEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT----KVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~----~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
++|+|||+ |++|+...+.+.+.|+ ++. ..|++... + +..|+..+.+..++.+. .|++++++|+....+
T Consensus 3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~-~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~--aDvVilav~~~~~~~ 78 (247)
T 3gt0_A 3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQII-CSDLNTANLKNASEKYGLTTTTDNNEVAKN--ADILILSIKPDLYAS 78 (247)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCHHHHHHHHHHHCCEECSCHHHHHHH--CSEEEECSCTTTHHH
T ss_pred CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEE-EEeCCHHHHHHHHHHhCCEEeCChHHHHHh--CCEEEEEeCHHHHHH
Confidence 57999998 9999999999999998 654 66765311 1 12488888899888776 999999999999999
Q ss_pred HHHHHHHc-CCC-EEEEecCCCChhH
Q psy8894 103 AIHEALDA-EMP-LIVCITEGIPQLD 126 (306)
Q Consensus 103 ~~~e~~~~-Gi~-~vvi~t~Gf~e~~ 126 (306)
+++++... .-. .++..+.|++.+.
T Consensus 79 v~~~l~~~l~~~~~vvs~~~gi~~~~ 104 (247)
T 3gt0_A 79 IINEIKEIIKNDAIIVTIAAGKSIES 104 (247)
T ss_dssp HC---CCSSCTTCEEEECSCCSCHHH
T ss_pred HHHHHHhhcCCCCEEEEecCCCCHHH
Confidence 99876543 222 3443678887544
No 122
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.24 E-value=0.00026 Score=66.19 Aligned_cols=89 Identities=22% Similarity=0.230 Sum_probs=64.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
+.++|+|||+ |++|+...+.|.+.|++++ ..+++... . ...|+.++ +++++... .|++++++|+....+++
T Consensus 15 ~~~~I~IIG~-G~mG~alA~~L~~~G~~V~-~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~--aDvVilavp~~~~~~v~ 89 (338)
T 1np3_A 15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVT-VGLRSGSATVAKAEAHGLKVA-DVKTAVAA--ADVVMILTPDEFQGRLY 89 (338)
T ss_dssp HTSCEEEECC-SHHHHHHHHHHHHTTCCEE-EECCTTCHHHHHHHHTTCEEE-CHHHHHHT--CSEEEECSCHHHHHHHH
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCcCEEE-EEECChHHHHHHHHHCCCEEc-cHHHHHhc--CCEEEEeCCcHHHHHHH
Confidence 3578999999 9999999999999999865 55655311 0 12466666 78787665 99999999999998888
Q ss_pred H-HHHHc-CCCEEEEecCCC
Q psy8894 105 H-EALDA-EMPLIVCITEGI 122 (306)
Q Consensus 105 ~-e~~~~-Gi~~vvi~t~Gf 122 (306)
+ +.... .-..+++...|+
T Consensus 90 ~~~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 90 KEEIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp HHHTGGGCCTTCEEEESCCH
T ss_pred HHHHHhhCCCCCEEEEcCCc
Confidence 7 55432 233455566665
No 123
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.22 E-value=0.0015 Score=60.20 Aligned_cols=108 Identities=10% Similarity=0.132 Sum_probs=72.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
.++|++||. |+||....++|.+.||++. +-|...... .-.|.....|+.|+.+. .|+++.|+|...+.+.+-.
T Consensus 3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~-v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~--~dvv~~~l~~~~~v~~V~~ 78 (300)
T 3obb_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQSAVDGLVAAGASAARSARDAVQG--ADVVISMLPASQHVEGLYL 78 (300)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEECSSHHHHHTT--CSEEEECCSCHHHHHHHHH
T ss_pred cCEEEEeee-hHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHcCCEEcCCHHHHHhc--CCceeecCCchHHHHHHHh
Confidence 368999999 9999999999999999965 556553101 12478888999999876 9999999998665544332
Q ss_pred H----HHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 107 A----LDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 107 ~----~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
- .+. .- +.++..|+.. .+..+++. +.++++|++++
T Consensus 79 ~~~g~~~~~~~g~iiId~sT~~-p~~~~~~a-~~~~~~G~~~l 119 (300)
T 3obb_A 79 DDDGLLAHIAPGTLVLECSTIA-PTSARKIH-AAARERGLAML 119 (300)
T ss_dssp SSSSSTTSCCC-CEEEECSCCC-HHHHHHHH-HHHHTTTCEEE
T ss_pred chhhhhhcCCCCCEEEECCCCC-HHHHHHHH-HHHHHcCCEEE
Confidence 1 111 11 2344355544 34444443 45678898777
No 124
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.22 E-value=0.0004 Score=65.24 Aligned_cols=84 Identities=18% Similarity=0.190 Sum_probs=62.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccC-----------------CHHhhhhcCCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFN-----------------TVKEARDATGA 88 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~-----------------sl~el~~~~~i 88 (306)
.||+|+|+ |++|+...+.+.+. ++++++..++..... .-.|+++|. +++++.+. +
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~--v 78 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT--S 78 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH--C
T ss_pred eEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcC--C
Confidence 48999999 99999999988876 788887766542100 012455553 33344334 9
Q ss_pred cEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 89 EATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
|++++|+|+....+..+.++++|++.+.+
T Consensus 79 DvV~~aTp~~~s~~~a~~~~~aG~kvV~~ 107 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIYLQLQRNAIFQ 107 (340)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence 99999999999999999999999997653
No 125
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.22 E-value=0.00044 Score=65.10 Aligned_cols=110 Identities=16% Similarity=0.231 Sum_probs=69.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeE-EEeeCCCCCC---c--eecCeec--cCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKV-VGGVSPGKGG---K--THLDLPV--FNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~v-v~~VnP~~~g---~--~i~Gip~--y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
+.+||+|+|+ |..|+.+.+.|.+ .+++ ++.++++... + ....+.+ ..++.++..+ .|++|.++|+...
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~--~DvVi~~~p~~~~ 90 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKE--FELVIGALPGFLG 90 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTT--CSEEEECCCGGGH
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhC--CCEEEEecCCccc
Confidence 4578999999 9999998888765 4553 3334432100 0 0111112 2235555554 8999999999999
Q ss_pred HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCC
Q psy8894 101 AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNC 147 (306)
Q Consensus 101 ~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc 147 (306)
..+++.|++.|++.+- + +...++ ..++. +.|++.|+.++ |.|
T Consensus 91 ~~v~~~~~~~g~~yvD-~-s~~~~~-~~~l~-~~a~~~g~~~i-~~~ 132 (365)
T 3abi_A 91 FKSIKAAIKSKVDMVD-V-SFMPEN-PLELR-DEAEKAQVTIV-FDA 132 (365)
T ss_dssp HHHHHHHHHHTCEEEE-C-CCCSSC-GGGGH-HHHHHTTCEEE-CCC
T ss_pred chHHHHHHhcCcceEe-e-eccchh-hhhhh-hhhccCCceee-ecC
Confidence 9999999999999654 2 333332 22332 45778887776 444
No 126
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.21 E-value=0.00052 Score=64.33 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=68.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH-H-H
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI-H-E 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~-~-e 106 (306)
.++|+|+|+ |++|+...+.+..+|++++ ..|+.. +...|...+.+++++..+ .|++++++|.. .+..++ + .
T Consensus 164 g~~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~dr~~--~~~~g~~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~ 237 (333)
T 3ba1_A 164 GKRVGIIGL-GRIGLAVAERAEAFDCPIS-YFSRSK--KPNTNYTYYGSVVELASN--SDILVVACPLTPETTHIINREV 237 (333)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSC--CTTCCSEEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCc--hhccCceecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHH
Confidence 468999999 9999999999999999975 667664 223366667889998776 99999999974 343333 1 1
Q ss_pred --HHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 107 --ALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 107 --~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
..+.| ..+++.+.|... +.+++.+ ..++.+++-.|
T Consensus 238 l~~mk~g-ailIn~srG~~v-d~~aL~~-aL~~g~i~ga~ 274 (333)
T 3ba1_A 238 IDALGPK-GVLINIGRGPHV-DEPELVS-ALVEGRLGGAG 274 (333)
T ss_dssp HHHHCTT-CEEEECSCGGGB-CHHHHHH-HHHHTSSCEEE
T ss_pred HhcCCCC-CEEEECCCCchh-CHHHHHH-HHHcCCCeEEE
Confidence 22233 234556666432 2233333 33555554444
No 127
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.21 E-value=0.00045 Score=65.07 Aligned_cols=90 Identities=23% Similarity=0.196 Sum_probs=62.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEee-CCCCCCceec----------------CeeccC-CHHhhhhcCCCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGV-SPGKGGKTHL----------------DLPVFN-TVKEARDATGAE 89 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~V-nP~~~g~~i~----------------Gip~y~-sl~el~~~~~iD 89 (306)
+..+|+|+||+|..|+...+.|.++ .+++++.. ..+..|+.+. .+.+.. +.+++ . ++|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~vD 79 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K--DVD 79 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T--TCS
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c--CCC
Confidence 3478999999999999999988876 66777554 2322233221 111211 23343 3 499
Q ss_pred EEEEecCchhHHHHHHHHHHcCCCEEEEecCCC
Q psy8894 90 ATVIYVPPPGAAKAIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 90 lavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf 122 (306)
++++++|...+.+.++.+.+.|++ ++-.++-|
T Consensus 80 vVf~atp~~~s~~~a~~~~~aG~~-VId~s~~~ 111 (350)
T 2ep5_A 80 VVLSALPNELAESIELELVKNGKI-VVSNASPF 111 (350)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCE-EEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCE-EEECCccc
Confidence 999999999999999999999999 44455544
No 128
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=97.21 E-value=0.0015 Score=61.56 Aligned_cols=114 Identities=23% Similarity=0.273 Sum_probs=80.0
Q ss_pred ccCCCcEEEEEcCCCCCChHHHH---HHHHc--CCeEEEeeCCCCCCcee--------cCeeccCCHHhhhhcCCCcEEE
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSK---QAIEY--GTKVVGGVSPGKGGKTH--------LDLPVFNTVKEARDATGAEATV 92 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~---~l~~~--g~~vv~~VnP~~~g~~i--------~Gip~y~sl~el~~~~~iDlav 92 (306)
.+..+++++|.|- |.+|+...| .+.++ ++++++.+ +...|+.. .|+|++.|++++.+. ++|+++
T Consensus 18 ~~~~~~~~vi~~~-g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~~~gipv~~d~~~al~~-~~d~lv 94 (350)
T 2g0t_A 18 LYQPGTPAAIVAW-GQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPVRYDVPVVSSVEKAKEM-GAEVLI 94 (350)
T ss_dssp HSCTTEEEEEECT-TTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-CCSCCBEESSHHHHHHT-TCCEEE
T ss_pred hhCcCCCEEEEeC-CCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCCCCCceeeCCHHHHHhc-CCCEEE
Confidence 4556788999998 888876654 34555 68999999 87766542 369999999999864 599999
Q ss_pred EecCc------hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEcc
Q psy8894 93 IYVPP------PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGP 145 (306)
Q Consensus 93 i~vp~------~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGP 145 (306)
+.+.+ +...+.+++|+++|... +..-.-+ ..+..++ .++|+++|..+++=
T Consensus 95 ig~a~~gg~l~~~~~~~I~~Al~~G~nV-vsglh~~-l~~~pel-~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 95 IGVSNPGGYLEEQIATLVKKALSLGMDV-ISGLHFK-ISQQTEF-LKIAHENGTRIIDI 150 (350)
T ss_dssp ECCCSCCHHHHHHHHHHHHHHHHTTCEE-EECCCC---CCHHHH-HHHHHHHTCCEEES
T ss_pred EEecCCCCCCCHHHHHHHHHHHHcCCcE-EeCChhh-hhCCHHH-HHHHHHCCCEEEEe
Confidence 98622 35568999999999984 4322222 2222333 35789999888864
No 129
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.20 E-value=0.0009 Score=59.53 Aligned_cols=88 Identities=20% Similarity=0.157 Sum_probs=61.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-----ecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-----HLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-----i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
+|+|+|+ |++|+...+.|.+.|++++ ..|+....+. -.|+. .+++++.+. .|++++++|+....+.+++
T Consensus 2 ~I~iIG~-G~mG~~la~~l~~~g~~V~-~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~--aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 2 RVGFIGF-GEVAQTLASRLRSRGVEVV-TSLEGRSPSTIERARTVGVT--ETSEEDVYS--CPVVISAVTPGVALGAARR 75 (264)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCEEE-ECCTTCCHHHHHHHHHHTCE--ECCHHHHHT--SSEEEECSCGGGHHHHHHH
T ss_pred eEEEEec-hHHHHHHHHHHHHCCCeEE-EeCCccCHHHHHHHHHCCCc--CCHHHHHhc--CCEEEEECCCHHHHHHHHH
Confidence 7999999 9999999999999999876 4676311011 13555 667777665 9999999999887777777
Q ss_pred HHHcCCCEEEEecCCCChhH
Q psy8894 107 ALDAEMPLIVCITEGIPQLD 126 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~Gf~e~~ 126 (306)
+...--+ +++-.++.....
T Consensus 76 ~~~~~~~-~vi~~s~~~~~~ 94 (264)
T 1i36_A 76 AGRHVRG-IYVDINNISPET 94 (264)
T ss_dssp HHTTCCS-EEEECSCCCHHH
T ss_pred HHHhcCc-EEEEccCCCHHH
Confidence 6654333 444445554433
No 130
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00096 Score=65.77 Aligned_cols=110 Identities=10% Similarity=0.076 Sum_probs=73.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce----e---cCeeccCCHHhhhhc-CCCcEEEEecCc-hhH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT----H---LDLPVFNTVKEARDA-TGAEATVIYVPP-PGA 100 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~----i---~Gip~y~sl~el~~~-~~iDlavi~vp~-~~~ 100 (306)
.+|+|||+ |.||+....+|.+.|+++. ..|++... ++ . .|+....+++++.+. ..+|++++++|+ ..+
T Consensus 11 ~~IgvIGl-G~MG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 11 ADFGLIGL-AVMGQNLILNAADHGFTVC-AYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCEEEEee-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 57999999 9999999999999999875 66665310 11 1 367788889887652 138999999999 578
Q ss_pred HHHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 101 AKAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 101 ~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
.++++++... .- +.++..+++.++ +..++.+ ..++.|+++++
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~~~~~-~~~~l~~-~l~~~g~~~v~ 132 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGNSHFP-DSNRRYE-ELKKKGILFVG 132 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHH-HHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEECCCCChh-HHHHHHH-HHHHcCCceeC
Confidence 8888776653 22 233435555533 3333333 34566877664
No 131
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.19 E-value=0.001 Score=59.80 Aligned_cols=107 Identities=9% Similarity=-0.062 Sum_probs=66.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~~e 106 (306)
++|+|+|+ |++|+...+.+.+ |++++ .+|++... +.+ .|+..+. ++++... .|++++++|... +.+++++
T Consensus 2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~--~D~vi~~v~~~~~~~~v~~~ 75 (289)
T 2cvz_A 2 EKVAFIGL-GAMGYPMAGHLAR-RFPTL-VWNRTFEKALRHQEEFGSEAV-PLERVAE--ARVIFTCLPTTREVYEVAEA 75 (289)
T ss_dssp CCEEEECC-STTHHHHHHHHHT-TSCEE-EECSSTHHHHHHHHHHCCEEC-CGGGGGG--CSEEEECCSSHHHHHHHHHH
T ss_pred CeEEEEcc-cHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHCCCcccC-HHHHHhC--CCEEEEeCCChHHHHHHHHH
Confidence 47999999 9999999999998 99864 66765310 111 2555555 6666555 999999999775 6667766
Q ss_pred HHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 107 ALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 107 ~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+... .-..+++..+.......+++. +..++.++.++.
T Consensus 76 l~~~l~~~~~vv~~s~~~~~~~~~l~-~~~~~~g~~~~~ 113 (289)
T 2cvz_A 76 LYPYLREGTYWVDATSGEPEASRRLA-ERLREKGVTYLD 113 (289)
T ss_dssp HTTTCCTTEEEEECSCCCHHHHHHHH-HHHHTTTEEEEE
T ss_pred HHhhCCCCCEEEECCCCCHHHHHHHH-HHHHHcCCEEEE
Confidence 5442 233444433333323333333 345556766653
No 132
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.00084 Score=57.75 Aligned_cols=88 Identities=20% Similarity=0.158 Sum_probs=60.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC-Ccee-cCeeccC-------CHHhhhhcCCCcEEEEecCch--
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG-GKTH-LDLPVFN-------TVKEARDATGAEATVIYVPPP-- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~-g~~i-~Gip~y~-------sl~el~~~~~iDlavi~vp~~-- 98 (306)
.++|.|.|++|..|+...+.|.+.|++++.. +.+.. .... .++.++. ++.++.+ ++|++|-+..+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAV-VRHPEKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEE-CSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-EcCcccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCCC
Confidence 4789999999999999999999999997744 33210 0111 2333332 2444444 499999876543
Q ss_pred ----------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ----------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ----------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 4566888888999988887665
No 133
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.19 E-value=0.00056 Score=64.56 Aligned_cols=93 Identities=19% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce----------ec------CeeccCCHHhhhhcCCCcEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT----------HL------DLPVFNTVKEARDATGAEAT 91 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~----------i~------Gip~y~sl~el~~~~~iDla 91 (306)
++++|+|+|+ |.+|......|.+.|+++. .++++..- +. .. ++....++++..+. .|++
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~--aDvV 103 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLARKGQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG--VTDI 103 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT--CCEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc--CCEE
Confidence 3568999999 9999999999999898854 44443100 00 01 23455678777654 8999
Q ss_pred EEecCchhHHHHHHHHHHc-C-CCEEEEecCCCChh
Q psy8894 92 VIYVPPPGAAKAIHEALDA-E-MPLIVCITEGIPQL 125 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf~e~ 125 (306)
++++|+....+++++.... . =..++..+.|+...
T Consensus 104 ilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 104 LIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp EECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred EECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 9999999999998887653 2 22455577888654
No 134
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00083 Score=62.16 Aligned_cols=107 Identities=8% Similarity=0.015 Sum_probs=72.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCC--C--ce------ecCeeccC-CHHhhhhcCCCcEEEEecCch
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKG--G--KT------HLDLPVFN-TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~--g--~~------i~Gip~y~-sl~el~~~~~iDlavi~vp~~ 98 (306)
++|+|||+ |.+|....+.|.+.| ++++ ..|++.. . ++ -.|+ +. +++++.+. .|++++++|+.
T Consensus 25 m~IgvIG~-G~mG~~lA~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~--aDvVi~avp~~ 98 (317)
T 4ezb_A 25 TTIAFIGF-GEAAQSIAGGLGGRNAARLA-AYDLRFNDPAASGALRARAAELGV--EPLDDVAGIAC--ADVVLSLVVGA 98 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCSEEE-EECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGG--CSEEEECCCGG
T ss_pred CeEEEECc-cHHHHHHHHHHHHcCCCeEE-EEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhc--CCEEEEecCCH
Confidence 68999998 999999999999999 8865 5565420 0 01 1255 66 78888776 89999999999
Q ss_pred hHHHHHHHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 99 GAAKAIHEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 99 ~~~~~~~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
...+.+++.... .-..+++-.++.+....+++. +..++.|++++.
T Consensus 99 ~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~-~~l~~~g~~~~d 144 (317)
T 4ezb_A 99 ATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAA-GAIATGKGSFVE 144 (317)
T ss_dssp GHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHH-HHHHTSSCEEEE
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHH-HHHHHcCCeEEe
Confidence 999988777653 223344434455444444443 345667776553
No 135
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.18 E-value=0.0014 Score=58.86 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCCCc-e--ecCee--ccCCHHhhhh-cCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKGGK-T--HLDLP--VFNTVKEARD-ATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~g~-~--i~Gip--~y~sl~el~~-~~~iDlavi~vp~~~~~~ 102 (306)
++|+|+|+ |++|+...+.+.+.|+ +++ .+|++.... . -.|+. .+.+++++.. . .|++++++|+....+
T Consensus 2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--aDvVilavp~~~~~~ 77 (281)
T 2g5c_A 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINPESISKAVDLGIIDEGTTSIAKVEDFS--PDFVMLSSPVRTFRE 77 (281)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHTTSCSEEESCGGGGGGTC--CSEEEECSCHHHHHH
T ss_pred cEEEEEec-CHHHHHHHHHHHhcCCCcEEE-EEeCCHHHHHHHHHCCCcccccCCHHHHhcCC--CCEEEEcCCHHHHHH
Confidence 47999998 9999999999998888 654 677753100 0 12443 3567777665 5 999999999999999
Q ss_pred HHHHHHHc-CCCEEEEecCCCCh
Q psy8894 103 AIHEALDA-EMPLIVCITEGIPQ 124 (306)
Q Consensus 103 ~~~e~~~~-Gi~~vvi~t~Gf~e 124 (306)
+++++... .-+.+++..++...
T Consensus 78 v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 78 IAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp HHHHHHHHSCTTCEEEECCSCCT
T ss_pred HHHHHHhhCCCCcEEEECCCCcH
Confidence 98887652 33344544445443
No 136
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.17 E-value=0.0004 Score=63.54 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=70.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeec-cCCHHhhhhcCCCcEEEEecCch-hHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPV-FNTVKEARDATGAEATVIYVPPP-GAAKAI 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~-y~sl~el~~~~~iDlavi~vp~~-~~~~~~ 104 (306)
.++|+|+|+ |++|+...+.|.+.|++++ ..|++... +. -.|... ..+++|+.+. .|++++++|.. .+..++
T Consensus 7 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~--aDvvi~~vp~~~~~~~v~ 82 (303)
T 3g0o_A 7 DFHVGIVGL-GSMGMGAARSCLRAGLSTW-GADLNPQACANLLAEGACGAAASAREFAGV--VDALVILVVNAAQVRQVL 82 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCSEEESSSTTTTTT--CSEEEECCSSHHHHHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHcCCccccCCHHHHHhc--CCEEEEECCCHHHHHHHH
Confidence 468999999 9999999999999999865 66765310 01 135555 7788888765 89999999986 444444
Q ss_pred ---HHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 105 ---HEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 105 ---~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
+++... .-..+++-++.......+++. +..++.|+.++.
T Consensus 83 ~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~-~~~~~~g~~~~~ 125 (303)
T 3g0o_A 83 FGEDGVAHLMKPGSAVMVSSTISSADAQEIA-AALTALNLNMLD 125 (303)
T ss_dssp C--CCCGGGSCTTCEEEECSCCCHHHHHHHH-HHHHTTTCEEEE
T ss_pred hChhhHHhhCCCCCEEEecCCCCHHHHHHHH-HHHHHcCCeEEe
Confidence 333332 223344434444443333333 345667776664
No 137
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.16 E-value=0.001 Score=65.50 Aligned_cols=112 Identities=10% Similarity=0.076 Sum_probs=72.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee-----cC--eeccCCHHhhhhc-CCCcEEEEecCch-h
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH-----LD--LPVFNTVKEARDA-TGAEATVIYVPPP-G 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i-----~G--ip~y~sl~el~~~-~~iDlavi~vp~~-~ 99 (306)
.++|+|||. |+||....++|.+.|++++ ..|++... +.. .| +..+.+++|+.+. .++|++++++|+. .
T Consensus 4 ~~kIgiIGl-G~MG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 4 QADIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA 81 (484)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH
T ss_pred CCEEEEECh-hHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH
Confidence 367999999 9999999999999999875 66665410 011 13 2336788888752 1389999999995 6
Q ss_pred HHHHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEEcc
Q psy8894 100 AAKAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGP 145 (306)
Q Consensus 100 ~~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGP 145 (306)
+.++++++... .- +.++..+++. ..+..++.+ ..++.|+++++.
T Consensus 82 v~~vl~~l~~~L~~g~iIId~st~~-~~~t~~~~~-~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 82 VDDFIEKLVPLLDTGDIIIDGGNSE-YRDTTRRCR-DLKAKGILFVGS 127 (484)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHH-HHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCC-chHHHHHHH-HHHhhccccccC
Confidence 77788777653 22 2333344444 333333333 346678877653
No 138
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.14 E-value=0.0018 Score=59.10 Aligned_cols=81 Identities=12% Similarity=0.171 Sum_probs=60.2
Q ss_pred cEEEEEc-CCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 31 SKVICQG-FTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 31 ~~VaVvG-asg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
++|+||| + |.+|....+.+.+.|++++ .++++. . .+..++... .|++++++|+....+++++...
T Consensus 22 ~~I~iIGg~-G~mG~~la~~l~~~G~~V~-~~~~~~--~--------~~~~~~~~~--aDvVilavp~~~~~~vl~~l~~ 87 (298)
T 2pv7_A 22 HKIVIVGGY-GKLGGLFARYLRASGYPIS-ILDRED--W--------AVAESILAN--ADVVIVSVPINLTLETIERLKP 87 (298)
T ss_dssp CCEEEETTT-SHHHHHHHHHHHTTTCCEE-EECTTC--G--------GGHHHHHTT--CSEEEECSCGGGHHHHHHHHGG
T ss_pred CEEEEEcCC-CHHHHHHHHHHHhCCCeEE-EEECCc--c--------cCHHHHhcC--CCEEEEeCCHHHHHHHHHHHHh
Confidence 5799999 6 9999999999999999865 677664 2 245566554 8999999999999999988765
Q ss_pred c-CCCEEEEecCCCChh
Q psy8894 110 A-EMPLIVCITEGIPQL 125 (306)
Q Consensus 110 ~-Gi~~vvi~t~Gf~e~ 125 (306)
. .-..+++..++....
T Consensus 88 ~l~~~~iv~~~~svk~~ 104 (298)
T 2pv7_A 88 YLTENMLLADLTSVKRE 104 (298)
T ss_dssp GCCTTSEEEECCSCCHH
T ss_pred hcCCCcEEEECCCCCcH
Confidence 2 333455445565443
No 139
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.14 E-value=0.00066 Score=64.20 Aligned_cols=89 Identities=15% Similarity=0.107 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceec-------Ce---e-ccCCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHL-------DL---P-VFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~-------Gi---p-~y~sl~el~~~~~iDlavi~vp~ 97 (306)
..+|+|+|++|..|+...+.|.++ .+++++..++...+..+. |. . .+.+ ++... ++|++++|+|.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~--~vDvVf~atp~ 92 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFS--TVDAVFCCLPH 92 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGG--GCSEEEECCCT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhc--CCCEEEEcCCc
Confidence 468999999999999999998887 568886666554333221 11 0 0111 22222 49999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
....+.+..+ +.|++ ++-.++-|.
T Consensus 93 ~~s~~~a~~~-~aG~~-VId~sa~~R 116 (359)
T 1xyg_A 93 GTTQEIIKEL-PTALK-IVDLSADFR 116 (359)
T ss_dssp TTHHHHHHTS-CTTCE-EEECSSTTT
T ss_pred hhHHHHHHHH-hCCCE-EEECCcccc
Confidence 9999999999 99997 444566564
No 140
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.13 E-value=0.00084 Score=65.65 Aligned_cols=110 Identities=13% Similarity=0.107 Sum_probs=72.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee------cCeeccCCHHhhhhc-CCCcEEEEecCch-hHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH------LDLPVFNTVKEARDA-TGAEATVIYVPPP-GAA 101 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i------~Gip~y~sl~el~~~-~~iDlavi~vp~~-~~~ 101 (306)
++|+|||+ |.||+...++|.+.|+++. ..|++... +.+ .|+..+.+++++.+. .++|++++++|+. .+.
T Consensus 6 ~~IgvIG~-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~ 83 (474)
T 2iz1_A 6 ANFGVVGM-AVMGKNLALNVESRGYTVA-IYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD 83 (474)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHH
T ss_pred CcEEEEee-HHHHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHH
Confidence 57999999 9999999999999999864 67765310 111 167788899887652 1389999999994 677
Q ss_pred HHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 102 KAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 102 ~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
++++++... .- +.++..++|... +..++. +..++.|+++++
T Consensus 84 ~vl~~l~~~l~~g~iiId~s~~~~~-~~~~l~-~~l~~~g~~~v~ 126 (474)
T 2iz1_A 84 ATIKSLLPLLDIGDILIDGGNTHFP-DTMRRN-AELADSGINFIG 126 (474)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCCHH-HHHHHH-HHTTTSSCEEEE
T ss_pred HHHHHHHhhCCCCCEEEECCCCCHH-HHHHHH-HHHHHCCCeEEC
Confidence 788766542 11 234445556532 333333 234556777663
No 141
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.13 E-value=0.0038 Score=56.42 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=60.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee-------cCeeccCCHHhhhhcCCCcEEEEecCc------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH-------LDLPVFNTVKEARDATGAEATVIYVPP------ 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i-------~Gip~y~sl~el~~~~~iDlavi~vp~------ 97 (306)
++|.|.|++|-.|+...+.|.+.|+++++...... ..++ .++. ..++.++.+. +|++|-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~Dl~-~~~~~~~~~~--~d~Vih~a~~~~~~~~ 78 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-NKAINDYEYRVSDYT-LEDLINQLND--VDAVVHLAATRGSQGK 78 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTT--CSEEEECCCCCCSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC-cccCCceEEEEcccc-HHHHHHhhcC--CCEEEEccccCCCCCh
Confidence 68999999999999999999999999875543311 1111 2333 3446666654 9999977543
Q ss_pred --------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 79 ISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 23467888888999998776664
No 142
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.12 E-value=0.00064 Score=64.35 Aligned_cols=93 Identities=16% Similarity=0.074 Sum_probs=66.6
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceecC----------------eeccC-CHHhhhhcCCC
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHLD----------------LPVFN-TVKEARDATGA 88 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~G----------------ip~y~-sl~el~~~~~i 88 (306)
+++..+|+|+|++|-.|....+.|.++ .+++......+..|+.+.. +.+.. +.+++ . ++
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~-~--~v 80 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM-D--DV 80 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC-T--TC
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh-c--CC
Confidence 345689999999999999999988777 5677766666665654321 11211 12222 2 49
Q ss_pred cEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 89 EATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
|+++.|+|...+.+.+.++.+.|++.|. .|+-|.
T Consensus 81 Dvvf~a~p~~~s~~~a~~~~~~G~~vID-lSa~~R 114 (359)
T 4dpk_A 81 DIIFSPLPQGAAGPVEEQFAKEGFPVIS-NSPDHR 114 (359)
T ss_dssp CEEEECCCTTTHHHHHHHHHHTTCEEEE-CSSTTT
T ss_pred CEEEECCChHHHHHHHHHHHHCCCEEEE-cCCCcc
Confidence 9999999999999999999999998655 576553
No 143
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.12 E-value=0.00064 Score=64.35 Aligned_cols=93 Identities=16% Similarity=0.074 Sum_probs=66.6
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceecC----------------eeccC-CHHhhhhcCCC
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHLD----------------LPVFN-TVKEARDATGA 88 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~G----------------ip~y~-sl~el~~~~~i 88 (306)
+++..+|+|+|++|-.|....+.|.++ .+++......+..|+.+.. +.+.. +.+++ . ++
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~-~--~v 80 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM-D--DV 80 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC-T--TC
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh-c--CC
Confidence 345689999999999999999988777 5677766666665654321 11211 12222 2 49
Q ss_pred cEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 89 EATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
|+++.|+|...+.+.+.++.+.|++.|. .|+-|.
T Consensus 81 Dvvf~a~p~~~s~~~a~~~~~~G~~vID-lSa~~R 114 (359)
T 4dpl_A 81 DIIFSPLPQGAAGPVEEQFAKEGFPVIS-NSPDHR 114 (359)
T ss_dssp CEEEECCCTTTHHHHHHHHHHTTCEEEE-CSSTTT
T ss_pred CEEEECCChHHHHHHHHHHHHCCCEEEE-cCCCcc
Confidence 9999999999999999999999998655 576553
No 144
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.11 E-value=0.001 Score=62.30 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=61.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc---------ee-------------cCeeccCCHHhhhhcCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK---------TH-------------LDLPVFNTVKEARDATG 87 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~---------~i-------------~Gip~y~sl~el~~~~~ 87 (306)
.||+|+|+ |.+|+...+.+.++ ++++++..+...... .+ .++++..+.+++...
T Consensus 2 ikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~-- 78 (337)
T 1cf2_P 2 KAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE-- 78 (337)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT--
T ss_pred eEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC--
Confidence 48999999 99999999988874 888886654431000 00 122222345555544
Q ss_pred CcEEEEecCchhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 88 AEATVIYVPPPGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 88 iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
+|++++|+|...+.+.++.++++|++ ++. +.+
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~-VId-~sp 110 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIK-AIF-QGG 110 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCC-EEE-CTT
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCE-EEE-ecC
Confidence 99999999999999999999999988 443 444
No 145
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.09 E-value=0.0013 Score=59.07 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=63.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCee--ccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLP--VFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip--~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
++|+|+|+ |++|+...+.+.+.|++++ .++++... +. -.|++ .+.+++++ .. .|++++++|+....++++
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~--~D~vi~av~~~~~~~~~~ 75 (279)
T 2f1k_A 1 MKIGVVGL-GLIGASLAGDLRRRGHYLI-GVSRQQSTCEKAVERQLVDEAGQDLSLL-QT--AKIIFLCTPIQLILPTLE 75 (279)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTSCSEEESCGGGG-TT--CSEEEECSCHHHHHHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHhCCCCccccCCHHHh-CC--CCEEEEECCHHHHHHHHH
Confidence 37999998 9999999999999999865 66765310 01 12442 56778888 54 999999999999999998
Q ss_pred HHHHc-CCCEEEEecCCCChhH
Q psy8894 106 EALDA-EMPLIVCITEGIPQLD 126 (306)
Q Consensus 106 e~~~~-Gi~~vvi~t~Gf~e~~ 126 (306)
++... .-..+++-.++.+...
T Consensus 76 ~l~~~~~~~~~vv~~~~~~~~~ 97 (279)
T 2f1k_A 76 KLIPHLSPTAIVTDVASVKTAI 97 (279)
T ss_dssp HHGGGSCTTCEEEECCSCCHHH
T ss_pred HHHhhCCCCCEEEECCCCcHHH
Confidence 87653 2233444344554433
No 146
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.08 E-value=0.00027 Score=62.91 Aligned_cols=87 Identities=15% Similarity=0.210 Sum_probs=62.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCC-ce---ecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGG-KT---HLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g-~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
++|+|+|+ |++|+...+.|.+.| +++. .+|++... +. ..|+.++.++.++. . .|++++++|+..+.++++
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~-~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~--~D~vi~~v~~~~~~~v~~ 75 (263)
T 1yqg_A 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIY-IANRGAEKRERLEKELGVETSATLPELH-S--DDVLILAVKPQDMEAACK 75 (263)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEE-EECSSHHHHHHHHHHTCCEEESSCCCCC-T--TSEEEECSCHHHHHHHHT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCeEE-EECCCHHHHHHHHHhcCCEEeCCHHHHh-c--CCEEEEEeCchhHHHHHH
Confidence 37999999 999999999998889 7754 66765310 11 13777777777766 5 999999999888888877
Q ss_pred HHHHcCCCEEEE-ecCCCCh
Q psy8894 106 EALDAEMPLIVC-ITEGIPQ 124 (306)
Q Consensus 106 e~~~~Gi~~vvi-~t~Gf~e 124 (306)
++.. . ..+++ ++.|++.
T Consensus 76 ~l~~-~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 76 NIRT-N-GALVLSVAAGLSV 93 (263)
T ss_dssp TCCC-T-TCEEEECCTTCCH
T ss_pred Hhcc-C-CCEEEEecCCCCH
Confidence 6543 3 33443 4578875
No 147
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.07 E-value=0.0012 Score=64.69 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=70.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---ecC-------eeccCCHHhhhhc-CCCcEEEEecCch
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---HLD-------LPVFNTVKEARDA-TGAEATVIYVPPP 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i~G-------ip~y~sl~el~~~-~~iDlavi~vp~~ 98 (306)
++|+|||+ |.||+....+|.+.|+++. .+|++... ++ ..| +..+.+++++.+. .++|++++++|+.
T Consensus 2 MkIgVIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~ 79 (478)
T 1pgj_A 2 MDVGVVGL-GVMGANLALNIAEKGFKVA-VFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG 79 (478)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred CEEEEECh-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCCh
Confidence 47999998 9999999999999999864 66765310 01 114 6777888887651 1389999999995
Q ss_pred -hHHHHHHHHHHc-CC-CEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 99 -GAAKAIHEALDA-EM-PLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 99 -~~~~~~~e~~~~-Gi-~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.++++++... .- +.++..+.|... +..++. +..++.|+.++
T Consensus 80 ~~v~~vl~~l~~~l~~g~iIId~sng~~~-~~~~l~-~~l~~~g~~~v 125 (478)
T 1pgj_A 80 AATDSTIEQLKKVFEKGDILVDTGNAHFK-DQGRRA-QQLEAAGLRFL 125 (478)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECCCCCHH-HHHHHH-HHHHTTTCEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCCCChH-HHHHHH-HHHHHCCCeEE
Confidence 677888766542 22 234445556533 223333 34456676655
No 148
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.02 E-value=0.00084 Score=60.73 Aligned_cols=88 Identities=16% Similarity=0.208 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEA 107 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~ 107 (306)
++|+|+|++|++|+...+.|.+.|++++ .+|++... +.. .|+.+. +..++.+. .|++++++|+..+.++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~~--aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEIAPEGRDRLQGMGIPLT-DGDGWIDE--ADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECCSHHHHHHHHHTTCCCC-CSSGGGGT--CSEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHhcCCCcC-CHHHHhcC--CCEEEEcCCchHHHHHHHHH
Confidence 5899999999999999999999999875 67765310 011 354443 55565554 99999999999999888877
Q ss_pred HHc-CCCEEE-EecCCC
Q psy8894 108 LDA-EMPLIV-CITEGI 122 (306)
Q Consensus 108 ~~~-Gi~~vv-i~t~Gf 122 (306)
... .-..++ ..++|.
T Consensus 88 ~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 88 VPRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGGSCTTCEEEESCSHH
T ss_pred HHhCCCCCEEEECCCCc
Confidence 653 223333 345554
No 149
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.02 E-value=0.0013 Score=61.69 Aligned_cols=89 Identities=12% Similarity=0.022 Sum_probs=62.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCCCCCCce--ecCe--eccC-CHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSPGKGGKT--HLDL--PVFN-TVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP~~~g~~--i~Gi--p~y~-sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.+|+|+||+|..|+...+.|.+. .+++++..+++..|+. +.|. .+.. +.+++ . ++|+++.++|.....+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~-~--~~DvV~~a~g~~~s~~ 83 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF-S--SVGLAFFAAAAEVSRA 83 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCG-G--GCSEEEECSCHHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHHh-c--CCCEEEEcCCcHHHHH
Confidence 57999999999999999988844 4556655555443432 2232 2221 12222 2 4999999999999999
Q ss_pred HHHHHHHcCCCEEEEecCCCC
Q psy8894 103 AIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
.++.+.+.|++. +.+++-|.
T Consensus 84 ~a~~~~~aG~kv-Id~Sa~~r 103 (340)
T 2hjs_A 84 HAERARAAGCSV-IDLSGALE 103 (340)
T ss_dssp HHHHHHHTTCEE-EETTCTTT
T ss_pred HHHHHHHCCCEE-EEeCCCCC
Confidence 999999999984 44676664
No 150
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.93 E-value=0.0027 Score=60.22 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=60.0
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHcCCe---EEEeeCCCCCCceec---C--eeccC--CHHhhhhcCCCcEEEEecCchh
Q psy8894 31 SKVICQGFTGKQGTFHSK-QAIEYGTK---VVGGVSPGKGGKTHL---D--LPVFN--TVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~-~l~~~g~~---vv~~VnP~~~g~~i~---G--ip~y~--sl~el~~~~~iDlavi~vp~~~ 99 (306)
.+|+|+||+|..|+...+ .+.+.+|. ++ .+..+..|+.+. | +.+.. +.+++ . ++|+++.|+|...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~-~~~~~s~G~~v~~~~g~~i~~~~~~~~~~~-~--~~DvVf~a~g~~~ 77 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPV-FFSTSQLGQAAPSFGGTTGTLQDAFDLEAL-K--ALDIIVTCQGGDY 77 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEE-EEESSSTTSBCCGGGTCCCBCEETTCHHHH-H--TCSEEEECSCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEE-EEEeCCCCCCccccCCCceEEEecCChHHh-c--CCCEEEECCCchh
Confidence 479999999999999998 56656653 33 333322344432 2 22332 23343 3 4999999999999
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCCC
Q psy8894 100 AAKAIHEALDAEMPLIVC-ITEGI 122 (306)
Q Consensus 100 ~~~~~~e~~~~Gi~~vvi-~t~Gf 122 (306)
..+.+..+.+.|+|.+|| .++-|
T Consensus 78 s~~~a~~~~~~G~k~vVID~ss~~ 101 (367)
T 1t4b_A 78 TNEIYPKLRESGWQGYWIDAASSL 101 (367)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSTT
T ss_pred HHHHHHHHHHCCCCEEEEcCChhh
Confidence 999999999999976665 34444
No 151
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.92 E-value=0.0018 Score=61.73 Aligned_cols=91 Identities=14% Similarity=0.029 Sum_probs=63.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEee-CCCCCCceecCe-e--------------ccCCHHh--hhhcCCCcE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGV-SPGKGGKTHLDL-P--------------VFNTVKE--ARDATGAEA 90 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~V-nP~~~g~~i~Gi-p--------------~y~sl~e--l~~~~~iDl 90 (306)
..+|+|+|++|-.|....+.|.++. +++.... ..+..|+.+..+ | .+.++++ ..+ ++|+
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~--~~Dv 96 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFL--ECDV 96 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGG--GCSE
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcc--cCCE
Confidence 4689999999999999999888874 5665444 565556554210 0 1111211 112 3999
Q ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 91 TVIYVPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 91 avi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
++.|+|...+.+.+.++.+.|++.|- .++-|.
T Consensus 97 vf~alp~~~s~~~~~~~~~~G~~VID-lSa~fR 128 (381)
T 3hsk_A 97 VFSGLDADVAGDIEKSFVEAGLAVVS-NAKNYR 128 (381)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCEEEE-CCSTTT
T ss_pred EEECCChhHHHHHHHHHHhCCCEEEE-cCCccc
Confidence 99999999999999999999998544 576663
No 152
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.92 E-value=0.0013 Score=61.75 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=65.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhc--CCCcEEEEecCchhHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDA--TGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~--~~iDlavi~vp~~~~~~~~ 104 (306)
.++|+|||+ |.+|....+.|.+.|++++ +.|++.... .-.|+..+.+++++... .+.|++++++|+..+.+++
T Consensus 8 ~~kIgIIG~-G~mG~slA~~L~~~G~~V~-~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl 85 (341)
T 3ktd_A 8 SRPVCILGL-GLIGGSLLRDLHAANHSVF-GYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLL 85 (341)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred CCEEEEEee-cHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHH
Confidence 467999998 9999999999999999875 677663101 12466667788776542 1379999999999999999
Q ss_pred HHHHHcCCCEEEEecCCCC
Q psy8894 105 HEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~Gf~ 123 (306)
+++....-..+++-.++..
T Consensus 86 ~~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 86 DAVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp HHHHHHCTTCCEEECCSCS
T ss_pred HHHHccCCCCEEEEcCCCC
Confidence 8877654444444344443
No 153
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.92 E-value=0.0015 Score=61.38 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=56.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHH-HHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAI-HEA 107 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~-~e~ 107 (306)
-++|+|+|. |++|+...+.++.+|++++ ..|+.. ....+...+.+++++.++ .|++++++|. +.+..++ ++.
T Consensus 171 gktiGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~ 244 (340)
T 4dgs_A 171 GKRIGVLGL-GQIGRALASRAEAFGMSVR-YWNRST--LSGVDWIAHQSPVDLARD--SDVLAVCVAASAATQNIVDASL 244 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSC--CTTSCCEECSSHHHHHHT--CSEEEECC----------CHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCc--ccccCceecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHH
Confidence 578999999 9999999999999999976 667764 223345567799999886 9999999994 3444444 333
Q ss_pred H-HcCCCE-EEEecCCC
Q psy8894 108 L-DAEMPL-IVCITEGI 122 (306)
Q Consensus 108 ~-~~Gi~~-vvi~t~Gf 122 (306)
. ..+-.. +++.+.|-
T Consensus 245 l~~mk~gailIN~aRG~ 261 (340)
T 4dgs_A 245 LQALGPEGIVVNVARGN 261 (340)
T ss_dssp HHHTTTTCEEEECSCC-
T ss_pred HhcCCCCCEEEECCCCc
Confidence 3 333333 44455553
No 154
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.90 E-value=0.0014 Score=62.01 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=70.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cC-ee----ccCCHHhhhhcCCCcEEEEecCch
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LD-LP----VFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~G-ip----~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
.+.++|+|+|+ |.+|+...+.|.+. +++ ...|.+... +++ .+ +. -+.+++++.+. +|++|.++|+.
T Consensus 14 ~~~~~v~IiGa-G~iG~~ia~~L~~~-~~V-~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~--~DvVIn~~P~~ 88 (365)
T 2z2v_A 14 GRHMKVLILGA-GNIGRAIAWDLKDE-FDV-YIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKE--FELVIGALPGF 88 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTTT-SEE-EEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTT--CSCEEECCCHH
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHcC-CeE-EEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhC--CCEEEECCChh
Confidence 35689999999 99999999888877 664 355554310 011 11 11 13456666655 99999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
...++++.|++.|+..+- ++. .+++ ..++. +.|++.|+.++
T Consensus 89 ~~~~v~~a~l~~G~~~vD-~s~-~~~~-~~~l~-~~Ak~aG~~~l 129 (365)
T 2z2v_A 89 LGFKSIKAAIKSKVDMVD-VSF-MPEN-PLELR-DEAEKAQVTIV 129 (365)
T ss_dssp HHHHHHHHHHHTTCCEEE-CCC-CSSC-GGGGH-HHHHHTTCEEE
T ss_pred hhHHHHHHHHHhCCeEEE-ccC-CcHH-HHHHH-HHHHHcCCEEE
Confidence 999999999999999644 343 3322 12222 35778887765
No 155
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.89 E-value=0.00082 Score=59.67 Aligned_cols=88 Identities=15% Similarity=0.110 Sum_probs=61.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC---------------ce---ecCeeccCCHHhhhhcCCCcEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG---------------KT---HLDLPVFNTVKEARDATGAEAT 91 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g---------------~~---i~Gip~y~sl~el~~~~~iDla 91 (306)
.++|+|+|+ |+||+...+.|.+.|++++ ..|++... .+ ..|...+.++.++.+. .|++
T Consensus 19 ~~kIgiIG~-G~mG~alA~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--aDvV 94 (245)
T 3dtt_A 19 GMKIAVLGT-GTVGRTMAGALADLGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAG--AELV 94 (245)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHH--CSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhc--CCEE
Confidence 578999998 9999999999999999865 45554310 00 1133445678887766 8999
Q ss_pred EEecCchhHHHHHHHH-HH-cCCCEEEEecCC
Q psy8894 92 VIYVPPPGAAKAIHEA-LD-AEMPLIVCITEG 121 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~-~~-~Gi~~vvi~t~G 121 (306)
++++|+....+++++. .. ..=+.++..+.|
T Consensus 95 ilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 95 VNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp EECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred EEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 9999999999888765 32 122345555633
No 156
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.88 E-value=0.0016 Score=61.31 Aligned_cols=90 Identities=18% Similarity=0.051 Sum_probs=62.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEee-CCCCCCcee---cC-------------eecc-CCHHhhhhcCCCcEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGV-SPGKGGKTH---LD-------------LPVF-NTVKEARDATGAEAT 91 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~V-nP~~~g~~i---~G-------------ip~y-~sl~el~~~~~iDla 91 (306)
.+|+|+|++|..|+...+.|.++ ++++++.. ++...++.+ .+ +.+. .+.+++.+ .++|++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-EDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-TTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-CCCCEE
Confidence 68999999999999999988876 56777555 454333332 11 1111 13344433 149999
Q ss_pred EEecCchhHHHHHHHHHHcCCCEEEEecCCC
Q psy8894 92 VIYVPPPGAAKAIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf 122 (306)
++++|...+.+.++.+.+.|++ ++-.++-|
T Consensus 88 ~~atp~~~~~~~a~~~~~aG~~-VId~s~~~ 117 (354)
T 1ys4_A 88 FSALPSDLAKKFEPEFAKEGKL-IFSNASAY 117 (354)
T ss_dssp EECCCHHHHHHHHHHHHHTTCE-EEECCSTT
T ss_pred EECCCchHHHHHHHHHHHCCCE-EEECCchh
Confidence 9999999999999999999998 34334333
No 157
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.87 E-value=0.0015 Score=61.29 Aligned_cols=86 Identities=21% Similarity=0.219 Sum_probs=64.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCC-C-------------CCc----e----------ecC--eeccC--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPG-K-------------GGK----T----------HLD--LPVFN-- 77 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~-~-------------~g~----~----------i~G--ip~y~-- 77 (306)
.+|+|+|+ |+.|+.+.+.+.+. ++++++..+|. . .|. + +.| ++++.
T Consensus 4 ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 4 IKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 58999999 99999999988876 88888776651 0 000 0 111 23453
Q ss_pred CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 78 TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 78 sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
+.++++- +.++|+++.|+|.....+.+..++++|+|.++|
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVI 123 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI 123 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEE
Confidence 6777741 124999999999999999999999999998775
No 158
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.84 E-value=0.0014 Score=60.33 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAI 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~ 104 (306)
-++|+|+|. |++|+...+.++.+|++++ ..||.. ..........+++++.++ .|++++++|. +.+..++
T Consensus 122 g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~l~ell~~--aDiV~l~~P~t~~t~~li 191 (290)
T 3gvx_A 122 GKALGILGY-GGIGRRVAHLAKAFGMRVI-AYTRSS--VDQNVDVISESPADLFRQ--SDFVLIAIPLTDKTRGMV 191 (290)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSSC--CCTTCSEECSSHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred cchheeecc-CchhHHHHHHHHhhCcEEE-EEeccc--cccccccccCChHHHhhc--cCeEEEEeeccccchhhh
Confidence 578999999 9999999999999999976 667764 222334556689999887 9999999995 4444443
No 159
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.81 E-value=0.006 Score=57.90 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=71.1
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHcCC---eEEEeeCCCCCCceec---C--eeccC--CHHhhhhcCCCcEEEEecCchh
Q psy8894 31 SKVICQGFTGKQGTFHSK-QAIEYGT---KVVGGVSPGKGGKTHL---D--LPVFN--TVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~-~l~~~g~---~vv~~VnP~~~g~~i~---G--ip~y~--sl~el~~~~~iDlavi~vp~~~ 99 (306)
.+|+|+||+|-.|+..++ .|.++.| +++..-..+ .|+.+. | +.+.. +.+++ + ++|+++.|+|...
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~ 76 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGMLHDAFDIESL-K--QLDAVITCQGGSY 76 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSCCCBCEETTCHHHH-T--TCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCCceEEEecCChhHh-c--cCCEEEECCChHH
Confidence 479999999999999998 7777664 555343334 455432 2 12211 12333 2 4999999999999
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCCCChh-H----HHHHHH-HH--HHhcCC-eEEccCCC
Q psy8894 100 AAKAIHEALDAEMPLIVC-ITEGIPQL-D----MVKVKH-RL--IRQSKS-RLIGPNCP 148 (306)
Q Consensus 100 ~~~~~~e~~~~Gi~~vvi-~t~Gf~e~-~----~~~~~~-~~--ar~~gi-~iiGPNc~ 148 (306)
+.+.+..+.+.|++.+|| .++-|.-+ + .-++-. ++ +++.++ .|..|||.
T Consensus 77 s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 77 TEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVGGNCT 135 (370)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEcCChH
Confidence 999999999999964444 44444322 1 011111 12 234666 47799994
No 160
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.78 E-value=0.0036 Score=57.28 Aligned_cols=92 Identities=9% Similarity=0.119 Sum_probs=57.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcC--CeEEEeeCCCC-CC--cee------cCeeccC-------CHHhhhhcCCCc
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYG--TKVVGGVSPGK-GG--KTH------LDLPVFN-------TVKEARDATGAE 89 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g--~~vv~~VnP~~-~g--~~i------~Gip~y~-------sl~el~~~~~iD 89 (306)
.+.++|.|.|++|-.|+.+.+.|++.| ++++ .++... .. ..+ .++..+. ++.++.+..++|
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKII-NFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEE-EEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEE-EEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 345789999999999999999999988 6665 333221 00 011 1233221 244444323489
Q ss_pred EEEEecCch------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 90 ATVIYVPPP------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 90 lavi~vp~~------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
++|-+.... .+..+++.|.+.|++.++.+++
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 998764321 1366788888999998776664
No 161
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.74 E-value=0.0012 Score=61.93 Aligned_cols=88 Identities=17% Similarity=0.185 Sum_probs=64.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCC-CCCC--------ce-----------------ecC--eecc--CCH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSP-GKGG--------KT-----------------HLD--LPVF--NTV 79 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP-~~~g--------~~-----------------i~G--ip~y--~sl 79 (306)
.||+|+|+ |+.|+.+.+.+.+. ++++++..+| ...+ +. +.| ++++ .+.
T Consensus 4 ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 4 VKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 58999998 99999999987775 7898877665 1100 00 112 2334 257
Q ss_pred Hhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecC
Q psy8894 80 KEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 80 ~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
++++- +.++|+++.++|.....+.+..++++|++.|++ +.
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~i-Sa 123 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVII-SA 123 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEE-SS
T ss_pred HHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEe-cc
Confidence 77752 125999999999999999999999999998775 54
No 162
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.73 E-value=0.0062 Score=57.96 Aligned_cols=114 Identities=12% Similarity=0.085 Sum_probs=71.9
Q ss_pred CcEEEEEcCCCCCChHHHH-HHHHcCC---eEEEeeCCCCCCceec---C--eeccC--CHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSK-QAIEYGT---KVVGGVSPGKGGKTHL---D--LPVFN--TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~-~l~~~g~---~vv~~VnP~~~g~~i~---G--ip~y~--sl~el~~~~~iDlavi~vp~~ 98 (306)
+.+|+|+||+|-.|+..++ .|.++.| +++..-.. ..|+.+. | +.+.. +.+++ . ++|+++.|+|..
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~~~~v~~~~~~~~~-~--~vDvvf~a~~~~ 79 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKNETTLKDATSIDDL-K--KCDVIITCQGGD 79 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCSCCBCEETTCHHHH-H--TCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCCceEEEeCCChhHh-c--CCCEEEECCChH
Confidence 4689999999999999998 7777664 45433333 4454432 2 12211 22333 2 499999999999
Q ss_pred hHHHHHHHHHHcCCCEEEE-ecCCCChh-H-------H-HHHHHHHHHhcCC-eEEccCCC
Q psy8894 99 GAAKAIHEALDAEMPLIVC-ITEGIPQL-D-------M-VKVKHRLIRQSKS-RLIGPNCP 148 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi-~t~Gf~e~-~-------~-~~~~~~~ar~~gi-~iiGPNc~ 148 (306)
.+.+.+..+.+.|++.+|| .++-|.-+ + . .+.+ +-+++.++ .|..|||.
T Consensus 80 ~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~~~~i~~Ianp~C~ 139 (377)
T 3uw3_A 80 YTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVI-KDALVNGTKNFIGGNCT 139 (377)
T ss_dssp HHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHH-HHHHHTTCCEEEECCHH
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHH-hhhhhcCCcEEEcCCHH
Confidence 9999999999999964443 45545322 1 1 1111 11234565 57799995
No 163
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.71 E-value=0.0023 Score=58.01 Aligned_cols=93 Identities=14% Similarity=0.057 Sum_probs=63.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-----ee-----------------------cCeeccCCHHh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-----TH-----------------------LDLPVFNTVKE 81 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-----~i-----------------------~Gip~y~sl~e 81 (306)
.++|+|+|+ |.||....+.+.+.|++++ .+|++.... .+ ..+....++++
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVT-AYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 478999999 9999999999999999975 566653100 00 01345567777
Q ss_pred hhhcCCCcEEEEecCch--hHHHHHHHHHHc-CCCEEEE-ecCCCChhH
Q psy8894 82 ARDATGAEATVIYVPPP--GAAKAIHEALDA-EMPLIVC-ITEGIPQLD 126 (306)
Q Consensus 82 l~~~~~iDlavi~vp~~--~~~~~~~e~~~~-Gi~~vvi-~t~Gf~e~~ 126 (306)
+... .|++|.++|.. ...++++++.+. .-..+++ .|++.+.++
T Consensus 82 ~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~ 128 (283)
T 4e12_A 82 AVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSD 128 (283)
T ss_dssp HTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH
T ss_pred Hhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHH
Confidence 6554 99999999987 666677776653 3344544 567776544
No 164
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.71 E-value=0.0011 Score=62.09 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=61.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee----------------cCeeccCCHHhhhhcCCCcEEEEe
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH----------------LDLPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i----------------~Gip~y~sl~el~~~~~iDlavi~ 94 (306)
+|+|+|+ |.+|......|.+.|+++. .++++... +.+ .++....+++++.+. .|+++++
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aDvVila 92 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVC-VWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG--AEIILFV 92 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEE-EECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT--CSSEEEC
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC--CCEEEEC
Confidence 8999999 9999999989988888864 55554200 001 134555677776654 8999999
Q ss_pred cCchhHHHHHHH----HHH---c-CCCEEEEecCCCChh
Q psy8894 95 VPPPGAAKAIHE----ALD---A-EMPLIVCITEGIPQL 125 (306)
Q Consensus 95 vp~~~~~~~~~e----~~~---~-Gi~~vvi~t~Gf~e~ 125 (306)
+|+..+.+++++ +.. . +. .++.++.|+..+
T Consensus 93 v~~~~~~~v~~~~~~gl~~~l~~~~~-ivv~~~~gi~~~ 130 (366)
T 1evy_A 93 IPTQFLRGFFEKSGGNLIAYAKEKQV-PVLVCTKGIERS 130 (366)
T ss_dssp CCHHHHHHHHHHHCHHHHHHHHHHTC-CEEECCCSCCTT
T ss_pred CChHHHHHHHHHhHHHHHHhcCccCC-EEEEECCcCCCc
Confidence 999888888876 432 2 43 345567687654
No 165
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=96.70 E-value=0.0041 Score=54.07 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhh--cCCCcEEEEecCchhH-HHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARD--ATGAEATVIYVPPPGA-AKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~--~~~iDlavi~vp~~~~-~~~~~e 106 (306)
.++++|+|| |..|+.+.+.+++.+|++++.+|.+....++.|+|++...+++++ +..+|.+++++|.... .++.+.
T Consensus 12 ~k~v~IiGA-Gg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vlg~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~ 90 (220)
T 4ea9_A 12 IGGVVIIGG-GGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVVGDDLALPMLREQGLSRLFVAIGDNRLRQKLGRK 90 (220)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEEESGGGHHHHHHTTCCEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEcC-CHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEECCHHHHHHhhcccccEEEEecCCHHHHHHHHHH
Confidence 457999999 778898888888889999999987653345889999986555432 1236778888876443 556677
Q ss_pred HHHcCCCEEEEec
Q psy8894 107 ALDAEMPLIVCIT 119 (306)
Q Consensus 107 ~~~~Gi~~vvi~t 119 (306)
+.+.|++....+.
T Consensus 91 l~~~g~~~~~~i~ 103 (220)
T 4ea9_A 91 ARDHGFSLVNAIH 103 (220)
T ss_dssp HHHTTCEECCEEC
T ss_pred HHhcCCCcCCcCC
Confidence 7788876544333
No 166
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.66 E-value=0.002 Score=55.23 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=61.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cC-------eeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LD-------LPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~G-------ip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
++|+|+|++|.+|+...+.|.+.|++++ .++++... +.+ .+ +. +.+++++.+. .|++++++|+..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~D~Vi~~~~~~~ 76 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIV-VGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEA--CDIAVLTIPWEH 76 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHH--CSEEEECSCHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhc--CCEEEEeCChhh
Confidence 3799999669999999999999999865 55554210 111 12 33 4567776665 999999999998
Q ss_pred HHHHHHHHHHc-CCCEEEEecCCCC
Q psy8894 100 AAKAIHEALDA-EMPLIVCITEGIP 123 (306)
Q Consensus 100 ~~~~~~e~~~~-Gi~~vvi~t~Gf~ 123 (306)
+.++++++... .-+.++..++|++
T Consensus 77 ~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 77 AIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 88888765431 2234555777776
No 167
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.65 E-value=0.0059 Score=56.56 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=61.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-------CeEEEeeCCCCC------Ccee----------------cCeeccCCHHh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-------TKVVGGVSPGKG------GKTH----------------LDLPVFNTVKE 81 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-------~~vv~~VnP~~~------g~~i----------------~Gip~y~sl~e 81 (306)
++|+|+|+ |.+|......|.+.| +++. .++++.. .+.+ .++....++++
T Consensus 9 mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVT-MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEE-EECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEE-EEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 58999999 999999888888877 6654 5555431 0001 12444567777
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHHc-C-CCEEEEecCCCC
Q psy8894 82 ARDATGAEATVIYVPPPGAAKAIHEALDA-E-MPLIVCITEGIP 123 (306)
Q Consensus 82 l~~~~~iDlavi~vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf~ 123 (306)
+.+. .|++++++|+....+++++.... + =..++.++.|+.
T Consensus 87 ~~~~--aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 87 AAED--ADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHTT--CSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred HHcC--CCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 6554 89999999999989988877543 2 124555777885
No 168
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.63 E-value=0.0035 Score=59.14 Aligned_cols=90 Identities=11% Similarity=0.052 Sum_probs=64.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCceec--------CeeccC-CHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTHL--------DLPVFN-TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i~--------Gip~y~-sl~el~~~~~iDlavi~vp~~ 98 (306)
...+|+|+|++|-.|....+.|.++ .+++...-..+..|+.+. .+++.+ +.+++..+ +|++++++|..
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~--~Dvvf~alp~~ 89 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKN--CDVLFTALPAG 89 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHH--CSEEEECCSTT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcC--CCEEEECCCcH
Confidence 3568999999999999999999887 566665445555555443 222222 23444333 99999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
.+.+.+.++ +|++. +=.++-|.
T Consensus 90 ~s~~~~~~~--~g~~V-IDlSsdfR 111 (351)
T 1vkn_A 90 ASYDLVREL--KGVKI-IDLGADFR 111 (351)
T ss_dssp HHHHHHTTC--CSCEE-EESSSTTT
T ss_pred HHHHHHHHh--CCCEE-EECChhhh
Confidence 999999988 78874 33677674
No 169
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.59 E-value=0.004 Score=59.09 Aligned_cols=89 Identities=21% Similarity=0.124 Sum_probs=62.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCe---EEEeeCCCCCCceec--C--eeccC-CHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTK---VVGGVSPGKGGKTHL--D--LPVFN-TVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~---vv~~VnP~~~g~~i~--G--ip~y~-sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.+|+|+||+|..|+...+.|.+.++. +.....++..|+.+. | +.+-+ +.+++ + ++|+++.|+|...+.+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~s~~ 79 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAF-E--GVDIALFSAGSSTSAK 79 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTT-T--TCSEEEECSCHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHh-c--CCCEEEECCChHhHHH
Confidence 58999999999999999988887653 444455655555432 2 11111 11222 2 4999999999999999
Q ss_pred HHHHHHHcCCCEEEEecCCCC
Q psy8894 103 AIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
.+..+.+.|++. +-.++-|.
T Consensus 80 ~a~~~~~~G~~v-IDlSa~~R 99 (366)
T 3pwk_A 80 YAPYAVKAGVVV-VDNTSYFR 99 (366)
T ss_dssp HHHHHHHTTCEE-EECSSTTT
T ss_pred HHHHHHHCCCEE-EEcCCccc
Confidence 999999999984 44676663
No 170
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.57 E-value=0.0014 Score=60.13 Aligned_cols=88 Identities=20% Similarity=0.215 Sum_probs=59.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC--CCCC-cee--cC-----------eeccC--CHHhhhhcCCCcEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP--GKGG-KTH--LD-----------LPVFN--TVKEARDATGAEATV 92 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP--~~~g-~~i--~G-----------ip~y~--sl~el~~~~~iDlav 92 (306)
++|+|+|+ |.+|......|.+.|+++. .+++ +... +.+ .| +.+.. ++++..+. .|+++
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~D~vi 76 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVR-IWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN--AEVVL 76 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEE-EECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT--CSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEE-EEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhc--CCEEE
Confidence 37999999 9999999999988899865 5665 3200 000 11 14444 66665544 99999
Q ss_pred EecCchhHHHHHHHHHHcCC-CEEEEecCCC
Q psy8894 93 IYVPPPGAAKAIHEALDAEM-PLIVCITEGI 122 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~~Gi-~~vvi~t~Gf 122 (306)
+++|+..+.++++++...+- +.++.++.|+
T Consensus 77 ~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 77 LGVSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp ECSCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred EcCChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 99999999998887654221 2344455687
No 171
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.55 E-value=0.013 Score=56.31 Aligned_cols=75 Identities=19% Similarity=0.170 Sum_probs=53.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---------------------cC-eeccCCHHhhhhcCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---------------------LD-LPVFNTVKEARDATG 87 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---------------------~G-ip~y~sl~el~~~~~ 87 (306)
++|+|+|+ |.+|......|.+.|++++ .+|.+... +.+ .| +....++++....
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~~G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~-- 76 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSARGHEVI-GVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLD-- 76 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHT--
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhcc--
Confidence 37999998 9999999999999999975 55553200 000 22 4555667765554
Q ss_pred CcEEEEecCchh----------HHHHHHHHHH
Q psy8894 88 AEATVIYVPPPG----------AAKAIHEALD 109 (306)
Q Consensus 88 iDlavi~vp~~~----------~~~~~~e~~~ 109 (306)
.|++++++|... +.+++++...
T Consensus 77 aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~ 108 (436)
T 1mv8_A 77 SDVSFICVGTPSKKNGDLDLGYIETVCREIGF 108 (436)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCcccCCCcchHHHHHHHHHHHH
Confidence 899999998766 7777776654
No 172
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=96.54 E-value=0.0051 Score=57.97 Aligned_cols=114 Identities=18% Similarity=0.152 Sum_probs=76.0
Q ss_pred ccCCCcEEEEEcCCCCCChHHHH----HHHHcCCeEEEeeCCCCCCcee-------cCeeccCCHHhhhhcCCCcEEEEe
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSK----QAIEYGTKVVGGVSPGKGGKTH-------LDLPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~----~l~~~g~~vv~~VnP~~~g~~i-------~Gip~y~sl~el~~~~~iDlavi~ 94 (306)
.+..+++++|.+- |..|+...| .++..++++++.++....|+.. .|+|++.|++++.+. ++|++++.
T Consensus 3 ~~~~~~~~vi~~~-g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~~~gipi~~~l~~al~~-~~d~lvig 80 (349)
T 2obn_A 3 RLPLNQRVAILLH-EGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGIYRYVPIVKSVEAALEY-KPQVLVIG 80 (349)
T ss_dssp ----CCCEEEECT-TTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCCCSCCCEESSHHHHGGG-CCSEEEEC
T ss_pred cCCCCCcEEEEeC-CCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCCcCCCCccCCHHHHHhC-CCCEEEEE
Confidence 3445677888886 777654433 3444489999999987767543 259999999999864 69999998
Q ss_pred cCc------hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEcc
Q psy8894 95 VPP------PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGP 145 (306)
Q Consensus 95 vp~------~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGP 145 (306)
+.+ +...+.+.+|+++|... +.. -...-.+..++ .++|++ |..++.=
T Consensus 81 ~a~~gG~l~~~~~~~i~~Al~~G~~V-vsg-lh~~l~~~pel-~~~A~~-g~~i~dv 133 (349)
T 2obn_A 81 IAPKGGGIPDDYWIELKTALQAGMSL-VNG-LHTPLANIPDL-NALLQP-GQLIWDV 133 (349)
T ss_dssp CCCCCC-SCGGGHHHHHHHHHTTCEE-EEC-SSSCCTTCHHH-HHHCCT-TCCEEET
T ss_pred ecCCCCCCCHHHHHHHHHHHHcCCcE-EeC-ccchhhCCHHH-HHHHHc-CCEEEEe
Confidence 622 46778999999999984 432 22222222223 357888 9888753
No 173
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.53 E-value=0.0079 Score=58.24 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=67.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--------------------cCeeccCCHHhhhhcCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--------------------LDLPVFNTVKEARDATGA 88 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--------------------~Gip~y~sl~el~~~~~i 88 (306)
.++|+|+|+ |.+|......|.+ |++++ .+|.+..- +.+ .++....++++.... .
T Consensus 36 ~mkIaVIGl-G~mG~~lA~~La~-G~~V~-~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~--a 110 (432)
T 3pid_A 36 FMKITISGT-GYVGLSNGVLIAQ-NHEVV-ALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN--A 110 (432)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHT-TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT--C
T ss_pred CCEEEEECc-CHHHHHHHHHHHc-CCeEE-EEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC--C
Confidence 468999999 9999887777777 99976 55544200 000 134555667666655 8
Q ss_pred cEEEEecCch-----------hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCC
Q psy8894 89 EATVIYVPPP-----------GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCP 148 (306)
Q Consensus 89 Dlavi~vp~~-----------~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~ 148 (306)
|++++++|.. .+.++++......-..+++..+..+....+++.+ ...+.++. ..|..+
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~-~l~~~~v~-~sPe~~ 179 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKE-RLGIDNVI-FSPEFL 179 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHH-HHTCCCEE-ECCCCC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHH-HHhhccEe-ecCccC
Confidence 9999999986 4566666655533344555555555443344433 23344432 255543
No 174
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.51 E-value=0.0019 Score=59.96 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeecc---CCHHhhhhcCCCcEEEEecCc-hhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVF---NTVKEARDATGAEATVIYVPP-PGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y---~sl~el~~~~~iDlavi~vp~-~~~~~~~ 104 (306)
..++|+|+|. |++|+...+.++.+|++++ ..|+.. ....++..+ .+++++..+ .|++++++|. +.+..++
T Consensus 138 ~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~~~~l~ell~~--aDiV~l~~Plt~~t~~li 211 (315)
T 3pp8_A 138 EEFSVGIMGA-GVLGAKVAESLQAWGFPLR-CWSRSR--KSWPGVESYVGREELRAFLNQ--TRVLINLLPNTAQTVGII 211 (315)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCCEE-EEESSC--CCCTTCEEEESHHHHHHHHHT--CSEEEECCCCCGGGTTCB
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EEcCCc--hhhhhhhhhcccCCHHHHHhh--CCEEEEecCCchhhhhhc
Confidence 3578999999 9999999999999999976 555543 223344333 578888876 9999999994 4455555
Q ss_pred -HHHHH-cCCCEEEE
Q psy8894 105 -HEALD-AEMPLIVC 117 (306)
Q Consensus 105 -~e~~~-~Gi~~vvi 117 (306)
++..+ ..-..+++
T Consensus 212 ~~~~l~~mk~gailI 226 (315)
T 3pp8_A 212 NSELLDQLPDGAYVL 226 (315)
T ss_dssp SHHHHTTSCTTEEEE
T ss_pred cHHHHhhCCCCCEEE
Confidence 33333 34444443
No 175
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.45 E-value=0.016 Score=56.32 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=62.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce----------------------ecCeeccCCHHhhhhcCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT----------------------HLDLPVFNTVKEARDATG 87 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~----------------------i~Gip~y~sl~el~~~~~ 87 (306)
++|+|+|+ |.+|......|.+.|++++ .+|.+..- +. ...+....+++++.+.
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~-- 78 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVR-CIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE-- 78 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG--
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEE-EEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc--
Confidence 58999999 9999988889999999976 55554200 00 0124455677776655
Q ss_pred CcEEEEecCch----------hHHHHHHHHHHc-CCCEEEEecCCCChh
Q psy8894 88 AEATVIYVPPP----------GAAKAIHEALDA-EMPLIVCITEGIPQL 125 (306)
Q Consensus 88 iDlavi~vp~~----------~~~~~~~e~~~~-Gi~~vvi~t~Gf~e~ 125 (306)
.|++++++|.. .+.++++..... .-..+++..+.++..
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 127 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVG 127 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTT
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCc
Confidence 89999999987 788888777663 334555555555433
No 176
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.44 E-value=0.0065 Score=55.95 Aligned_cols=96 Identities=17% Similarity=0.215 Sum_probs=62.2
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC------Cce--------ecCeeccCCHHhhhhcCCCcEE
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG------GKT--------HLDLPVFNTVKEARDATGAEAT 91 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~------g~~--------i~Gip~y~sl~el~~~~~iDla 91 (306)
+...+++|+|+|+ |.+|......|.+.|+++....++... |.. ...+++..+++++ . +.|++
T Consensus 15 ~~~~~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~v 90 (318)
T 3hwr_A 15 LYFQGMKVAIMGA-GAVGCYYGGMLARAGHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAV-Q--GADLV 90 (318)
T ss_dssp -----CEEEEESC-SHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGG-T--TCSEE
T ss_pred hhccCCcEEEECc-CHHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-C--CCCEE
Confidence 3455689999999 999999998998889986533333210 000 0123344556554 2 38999
Q ss_pred EEecCchhHHHHHHHHHHc-C-CCEEEEecCCCChh
Q psy8894 92 VIYVPPPGAAKAIHEALDA-E-MPLIVCITEGIPQL 125 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf~e~ 125 (306)
++++|+....++++++... + =..++.++.|+..+
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~ 126 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENA 126 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHH
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcH
Confidence 9999999999998887643 2 13466689999654
No 177
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.43 E-value=0.014 Score=51.97 Aligned_cols=87 Identities=23% Similarity=0.227 Sum_probs=59.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEee-CCCCCCce--ecCeeccC-------CHHhhhhcCCCcEEEEecCc--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGV-SPGKGGKT--HLDLPVFN-------TVKEARDATGAEATVIYVPP-- 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~V-nP~~~g~~--i~Gip~y~-------sl~el~~~~~iDlavi~vp~-- 97 (306)
++|.|.|++|..|+...+.|.+. |+++++.+ +|... .. -.++.++. ++.++.+ ++|+++.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~ 77 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIH 77 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc
Confidence 36999999999999999888887 89977553 23211 11 12333322 2444444 49999988654
Q ss_pred ------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 78 PSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 45567888999999998887665
No 178
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.43 E-value=0.01 Score=54.22 Aligned_cols=90 Identities=17% Similarity=0.113 Sum_probs=57.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee----cCeeccCCHHhhhhcCCCcEEEEecCc------
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH----LDLPVFNTVKEARDATGAEATVIYVPP------ 97 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i----~Gip~y~sl~el~~~~~iDlavi~vp~------ 97 (306)
.+.++|.|.|++|-.|+...+.|++.|+++++...... ...+ .++.-..++.++.+ ++|+++-+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~ 93 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-GTGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSWAPA 93 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-SSCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCSSGG
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-CCCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCcchh
Confidence 34578999999999999999999999999875533221 1111 11111223455555 49999876432
Q ss_pred ----------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ----------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ----------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 94 ~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 94 DRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp GHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 12456788888899988887665
No 179
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.43 E-value=0.0035 Score=57.46 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=59.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-e------------cCeeccC-------CHHhhhhcCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-H------------LDLPVFN-------TVKEARDATGA 88 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-i------------~Gip~y~-------sl~el~~~~~i 88 (306)
+.++|.|.|++|-.|+...+.|++.|+++++.........+ . .++..+. ++.++.+ ++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CC
Confidence 46899999999999999999999999998755432210010 0 2333221 2444444 49
Q ss_pred cEEEEecCc------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 89 EATVIYVPP------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 89 Dlavi~vp~------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
|++|-+... ..+..+++.|.+.|++.++.+++
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 999977642 11334788888999988876654
No 180
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.42 E-value=0.0061 Score=52.19 Aligned_cols=87 Identities=17% Similarity=0.201 Sum_probs=59.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEee-CCCCCCceecCeeccC-C-------HHhhhhcCCCcEEEEecCch---
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGV-SPGKGGKTHLDLPVFN-T-------VKEARDATGAEATVIYVPPP--- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V-nP~~~g~~i~Gip~y~-s-------l~el~~~~~iDlavi~vp~~--- 98 (306)
++|.|.|++|..|+...+.|.+.|+++++.. ++.. -.+..++.++. + +.++.+ ++|++|-+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~~ 77 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ-VPQYNNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGKS 77 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGG-SCCCTTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTSS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccc-hhhcCCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCCC
Confidence 3799999999999999999999999977543 2221 01112333222 2 333333 499999876543
Q ss_pred -------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 -------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 -------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 78 ~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 78 LLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 3677889998999998887775
No 181
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.42 E-value=0.0059 Score=53.16 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEee-CCCCCCce--ecCeeccC-------CHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGV-SPGKGGKT--HLDLPVFN-------TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~V-nP~~~g~~--i~Gip~y~-------sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|.|.|++|..|+...+.|.+.| ++++... ++... .+ -.++.++. ++.++.+ ++|++|.+....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~ 99 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-HKPYPTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGE 99 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-CSSCCTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCST
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-cccccCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC
Confidence 4789999999999999999999999 7866432 22210 11 11232221 2444444 489999776653
Q ss_pred h----HHHHHHHHHHcCCCEEEEecC
Q psy8894 99 G----AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ~----~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
. +..+++.+.+.|++.++.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEec
Confidence 3 455677788889998888776
No 182
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.42 E-value=0.0075 Score=52.15 Aligned_cols=75 Identities=19% Similarity=0.164 Sum_probs=56.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
.++|+|+|+ |++|+...+.|.+.|++++ .++++. + ..+ +.|++++++|+....++++++..
T Consensus 19 ~~~I~iiG~-G~mG~~la~~l~~~g~~V~-~~~~~~--~-------------~~~--~aD~vi~av~~~~~~~v~~~l~~ 79 (209)
T 2raf_A 19 GMEITIFGK-GNMGQAIGHNFEIAGHEVT-YYGSKD--Q-------------ATT--LGEIVIMAVPYPALAALAKQYAT 79 (209)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTC--C-------------CSS--CCSEEEECSCHHHHHHHHHHTHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCH--H-------------Hhc--cCCEEEEcCCcHHHHHHHHHHHH
Confidence 568999998 9999999999999999865 677764 2 223 38999999999888888877643
Q ss_pred -cCCCEEEEecCCCC
Q psy8894 110 -AEMPLIVCITEGIP 123 (306)
Q Consensus 110 -~Gi~~vvi~t~Gf~ 123 (306)
..=+.++..+.|++
T Consensus 80 ~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLKGKIVVDITNPLN 94 (209)
T ss_dssp HHTTSEEEECCCCBC
T ss_pred hcCCCEEEEECCCCC
Confidence 23234555677876
No 183
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.40 E-value=0.0066 Score=55.94 Aligned_cols=69 Identities=26% Similarity=0.273 Sum_probs=53.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~ 104 (306)
..++|+|+|. |++|+...+.++.+|++++ ..||... +. +...+.+++++..+ .|++++++|... +..++
T Consensus 123 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~dr~~~-~~--~~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i 192 (303)
T 1qp8_A 123 QGEKVAVLGL-GEIGTRVGKILAALGAQVR-GFSRTPK-EG--PWRFTNSLEEALRE--ARAAVCALPLNKHTRGLV 192 (303)
T ss_dssp TTCEEEEESC-STHHHHHHHHHHHTTCEEE-EECSSCC-CS--SSCCBSCSHHHHTT--CSEEEECCCCSTTTTTCB
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-cc--CcccCCCHHHHHhh--CCEEEEeCcCchHHHHHh
Confidence 3578999999 9999999999999999976 6777652 22 44456689898876 999999999763 44444
No 184
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.40 E-value=0.0054 Score=55.32 Aligned_cols=92 Identities=11% Similarity=0.103 Sum_probs=59.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCeeccC------------CHHhhhhc-CCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDLPVFN------------TVKEARDA-TGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gip~y~------------sl~el~~~-~~iDlavi~ 94 (306)
++|+|+|+ |.+|......|.+.|+++. .++++... +.+ .|+.... +.+++.+. .+.|+++++
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVT-LIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEE-EEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 58999999 9999999999999999865 56654200 111 1322211 23344330 148999999
Q ss_pred cCchhHHHHHHHHHHc-C-CCEEEEecCCCCh
Q psy8894 95 VPPPGAAKAIHEALDA-E-MPLIVCITEGIPQ 124 (306)
Q Consensus 95 vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf~e 124 (306)
+|+....++++++... + =+.++.++.|+..
T Consensus 82 v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 82 TKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp SCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred eccccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 9999988888877653 2 2345556778863
No 185
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.39 E-value=0.0066 Score=56.77 Aligned_cols=91 Identities=20% Similarity=0.046 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC---CeEEEeeCCCCCCcee--cCeec-cCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG---TKVVGGVSPGKGGKTH--LDLPV-FNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g---~~vv~~VnP~~~g~~i--~Gip~-y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
..+|+|+||+|..|+...+.|.+.+ +++++..+++..|+.+ .|..+ +.+++..+- .++|+++.|+|.....+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~-~~vDvVf~a~g~~~s~~~ 81 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDW-SQVHIALFSAGGELSAKW 81 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCG-GGCSEEEECSCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHh-cCCCEEEECCCchHHHHH
Confidence 4689999999999999999888863 4677555555434422 23221 122221111 149999999999999999
Q ss_pred HHHHHHcCCCEEEEecCCC
Q psy8894 104 IHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf 122 (306)
++.+.+.|++. +..++-|
T Consensus 82 a~~~~~~G~~v-Id~s~~~ 99 (336)
T 2r00_A 82 APIAAEAGVVV-IDNTSHF 99 (336)
T ss_dssp HHHHHHTTCEE-EECSSTT
T ss_pred HHHHHHcCCEE-EEcCCcc
Confidence 99999999974 4355544
No 186
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.38 E-value=0.0026 Score=59.86 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=68.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH-
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI- 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~- 104 (306)
+.++|+|||. |++|+...+.++.+|++++ ..||..... ...|...+.+++++..+ .|++++++|.. .+..++
T Consensus 167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 167 RGETLGIIGL-GRVGQAVALRAKAFGFNVL-FYDPYLSDGVERALGLQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCTTHHHHHTCEECSSHHHHHHH--CSEEEECCCCCTTCTTSBS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhHhhcCCeecCCHHHHHhc--CCEEEEcCCCCHHHHHHhH
Confidence 3578999999 9999999999999999976 577754211 12366656689999876 99999999974 344444
Q ss_pred HHHHH-cCCCEE-EEecCCCChhHHHHHHHHHHHhcCCe
Q psy8894 105 HEALD-AEMPLI-VCITEGIPQLDMVKVKHRLIRQSKSR 141 (306)
Q Consensus 105 ~e~~~-~Gi~~v-vi~t~Gf~e~~~~~~~~~~ar~~gi~ 141 (306)
++.++ ..-..+ ++.+.|-.. +.+++.+ ..++.++.
T Consensus 243 ~~~l~~mk~gailIN~arg~~v-d~~aL~~-aL~~g~i~ 279 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGLV-DEKALAQ-ALKEGRIR 279 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTSB-CHHHHHH-HHHHTSEE
T ss_pred HHHHhcCCCCCEEEECCCChHH-hHHHHHH-HHHhCCCc
Confidence 33333 333444 445555332 2233332 34555554
No 187
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.38 E-value=0.0016 Score=59.65 Aligned_cols=115 Identities=17% Similarity=0.286 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeec--cCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPV--FNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~--y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+.++|+|+|+ |++|+...+.++.+|++++ ..||.....+ ..|..+ +.+++++... .|++++++|.....+.
T Consensus 156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~--aDvVi~~~p~~~i~~~ 231 (300)
T 2rir_A 156 HGSQVAVLGL-GRTGMTIARTFAALGANVK-VGARSSAHLARITEMGLVPFHTDELKEHVKD--IDICINTIPSMILNQT 231 (300)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTCEEEEGGGHHHHSTT--CSEEEECCSSCCBCHH
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHCCCeEEchhhHHHHhhC--CCEEEECCChhhhCHH
Confidence 4689999999 9999999999999999865 6776531011 125443 3577777765 9999999998544321
Q ss_pred HHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE-ccCCCceecC
Q psy8894 104 IHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI-GPNCPGIIAP 153 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii-GPNc~Gi~~~ 153 (306)
.-...+.| ..+++++.|-...+. +.+++.|++++ -||..|.+.+
T Consensus 232 ~~~~mk~g-~~lin~a~g~~~~~~-----~~a~~~G~~~i~~pg~~g~v~~ 276 (300)
T 2rir_A 232 VLSSMTPK-TLILDLASRPGGTDF-----KYAEKQGIKALLAPGLPGIVAP 276 (300)
T ss_dssp HHTTSCTT-CEEEECSSTTCSBCH-----HHHHHHTCEEEECCCHHHHHCH
T ss_pred HHHhCCCC-CEEEEEeCCCCCcCH-----HHHHHCCCEEEECCCCCCcHHH
Confidence 11112222 234445544333322 24567788765 5776666644
No 188
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.38 E-value=0.0051 Score=56.57 Aligned_cols=90 Identities=22% Similarity=0.199 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-------ec----------CeeccCCHHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-------HL----------DLPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-------i~----------Gip~y~sl~el~~~~~iDlavi 93 (306)
++|+|+|+ |.+|......|.+.|+++. .++++.. +. +. .++++.+.+++.+. .|++++
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~--~DlVil 77 (320)
T 3i83_A 3 LNILVIGT-GAIGSFYGALLAKTGHCVS-VVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETK--PDCTLL 77 (320)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHTTCEEE-EECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSC--CSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCC--CCEEEE
Confidence 68999999 9999999888888898865 5555421 11 11 12345567776543 899999
Q ss_pred ecCchhHHHHHHHHHHc-C-CCEEEEecCCCChh
Q psy8894 94 YVPPPGAAKAIHEALDA-E-MPLIVCITEGIPQL 125 (306)
Q Consensus 94 ~vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf~e~ 125 (306)
+||+....++++++... + =..++.++.|+...
T Consensus 78 avK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~ 111 (320)
T 3i83_A 78 CIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE 111 (320)
T ss_dssp CCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS
T ss_pred ecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH
Confidence 99999999888887643 2 13566688999643
No 189
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.37 E-value=0.016 Score=49.51 Aligned_cols=86 Identities=9% Similarity=0.054 Sum_probs=58.0
Q ss_pred cEEEEEcCCCCCChHHHHHHH-HcCCeEEEee-CCC-CCCce----ecCeecc-------CCHHhhhhcCCCcEEEEecC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAI-EYGTKVVGGV-SPG-KGGKT----HLDLPVF-------NTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~-~~g~~vv~~V-nP~-~~g~~----i~Gip~y-------~sl~el~~~~~iDlavi~vp 96 (306)
++|.|.|++|..|+...+.|. +.|++++... ++. .. ++ ..++..+ .++.++.+ ++|++|.+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCC
Confidence 569999999999999999998 7899976432 222 10 11 1122222 22444444 4999998775
Q ss_pred c---hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 97 P---PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 97 ~---~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
. . +..+++.+.+.|++.++.+++
T Consensus 83 ~~n~~-~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 83 ESGSD-MASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp CCHHH-HHHHHHHHHHTTCCEEEEEEE
T ss_pred CCChh-HHHHHHHHHhcCCCeEEEEee
Confidence 4 3 677788888899988887665
No 190
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.36 E-value=0.0082 Score=55.37 Aligned_cols=89 Identities=15% Similarity=0.121 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cCe--------------eccCCHHhhhhcCCCcEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LDL--------------PVFNTVKEARDATGAEAT 91 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~Gi--------------p~y~sl~el~~~~~iDla 91 (306)
+++|+|+|+ |.+|......|.+.|+++. .++++... +.+ .++ ..+.+++++... .|++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~D~v 79 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVL-AWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD--ADVI 79 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT--CSEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhc--CCEE
Confidence 468999999 9999998888988899864 66654200 011 122 245678776554 9999
Q ss_pred EEecCchhHHHHHHHHHHc-CCCEEEEecCCC
Q psy8894 92 VIYVPPPGAAKAIHEALDA-EMPLIVCITEGI 122 (306)
Q Consensus 92 vi~vp~~~~~~~~~e~~~~-Gi~~vvi~t~Gf 122 (306)
++++|+....++++++... .-..+++...|.
T Consensus 80 i~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 80 LIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999988877543 223334434553
No 191
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.0053 Score=58.70 Aligned_cols=94 Identities=15% Similarity=0.092 Sum_probs=62.2
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcC--------Ce-EEEeeCCCCCCc-------------------e-ecCeecc
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYG--------TK-VVGGVSPGKGGK-------------------T-HLDLPVF 76 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g--------~~-vv~~VnP~~~g~-------------------~-i~Gip~y 76 (306)
...+|.||+|+|+ |..|++....+.+.| .+ .+|.-++....+ . -..+...
T Consensus 30 ~~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 30 AAEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp ---CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred ccCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4677999999999 999998877665532 12 334433221000 0 1245566
Q ss_pred CCHHhhhhcCCCcEEEEecCchhHHHHHHHHHHc---CCCEEEEecCCCC
Q psy8894 77 NTVKEARDATGAEATVIYVPPPGAAKAIHEALDA---EMPLIVCITEGIP 123 (306)
Q Consensus 77 ~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~~---Gi~~vvi~t~Gf~ 123 (306)
.++.++.+. .|++|+++|.....+++++.... +.. ++..+-|+.
T Consensus 109 ~dl~~al~~--ad~ii~avPs~~~r~~l~~l~~~~~~~~~-iv~~~KGie 155 (391)
T 4fgw_A 109 PDLIDSVKD--VDIIVFNIPHQFLPRICSQLKGHVDSHVR-AISCLKGFE 155 (391)
T ss_dssp SCHHHHHTT--CSEEEECSCGGGHHHHHHHHTTTSCTTCE-EEECCCSCE
T ss_pred CCHHHHHhc--CCEEEEECChhhhHHHHHHhccccCCCce-eEEeccccc
Confidence 778887765 99999999999999999998653 333 455678983
No 192
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.33 E-value=0.0056 Score=55.75 Aligned_cols=92 Identities=13% Similarity=-0.002 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--------------------------------ecCeeccC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--------------------------------HLDLPVFN 77 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--------------------------------i~Gip~y~ 77 (306)
.++|+|+|+ |.||......+.+.|++++ .+|++...-+ ...+....
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~-~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAATGHTVV-LVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 468999999 9999988888888899875 6676531000 01244556
Q ss_pred CHHhhhhcCCCcEEEEecCchh--HHHHHHHHHHc-CCCEEEE-ecCCCChh
Q psy8894 78 TVKEARDATGAEATVIYVPPPG--AAKAIHEALDA-EMPLIVC-ITEGIPQL 125 (306)
Q Consensus 78 sl~el~~~~~iDlavi~vp~~~--~~~~~~e~~~~-Gi~~vvi-~t~Gf~e~ 125 (306)
++++.... .|++|+++|... ..++++++.+. .-+.+++ .|++++.+
T Consensus 93 ~~~~~~~~--aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~ 142 (302)
T 1f0y_A 93 DAASVVHS--TDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT 142 (302)
T ss_dssp CHHHHTTS--CSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH
T ss_pred CHHHhhcC--CCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 77755554 899999999864 34555655432 2233443 46677644
No 193
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=96.33 E-value=0.017 Score=51.69 Aligned_cols=88 Identities=9% Similarity=0.041 Sum_probs=56.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC----CCceecCe----eccCCHHhhhhcCCCcEEEEecCch---
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK----GGKTHLDL----PVFNTVKEARDATGAEATVIYVPPP--- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~----~g~~i~Gi----p~y~sl~el~~~~~iDlavi~vp~~--- 98 (306)
.++|.|.|++|..|+...+.|.+.|+++++...... ....+... .+..-..|+. ++|+++-+....
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~d~vi~~a~~~~~~ 83 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---DVRLVYHLASHKSVP 83 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---TEEEEEECCCCCCHH
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---cCCEEEECCccCChH
Confidence 578999999999999999999999999875432211 00111111 0111123333 389888654321
Q ss_pred --------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 --------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 --------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 84 ~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 84 RSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 2356888888899988886664
No 194
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.31 E-value=0.022 Score=44.65 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=56.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cCeecc-C---CHHhhhh--cCCCcEEEEecCchhH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LDLPVF-N---TVKEARD--ATGAEATVIYVPPPGA 100 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~Gip~y-~---sl~el~~--~~~iDlavi~vp~~~~ 100 (306)
++|+|+|+ |.+|+...+.|.+.|++++ .++++... +.+ .|+.++ . +.+.+.+ -.+.|++++++|....
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIV-LIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 58999999 9999999999999998865 55554210 111 144332 2 2222211 1248999999998766
Q ss_pred HHHH-HHHHHcCCCEEEEecCCC
Q psy8894 101 AKAI-HEALDAEMPLIVCITEGI 122 (306)
Q Consensus 101 ~~~~-~e~~~~Gi~~vvi~t~Gf 122 (306)
...+ +.+...+.+.++..+.+.
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEECSST
T ss_pred HHHHHHHHHHcCCCEEEEEecCH
Confidence 5544 444456777777666554
No 195
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=96.30 E-value=0.036 Score=52.79 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=80.7
Q ss_pred CCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEee-CC----------
Q psy8894 167 QRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGEI-GG---------- 235 (306)
Q Consensus 167 ~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E~-~~---------- 235 (306)
..|+|++++-+|+++...++.....|.-...++-+|+.+ ..-.+.+.++.+..||++++|++.+=+ +-
T Consensus 255 l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a-~~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~gii 333 (388)
T 2nu8_B 255 LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGA-TKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGII 333 (388)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCC-CHHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCC-CHHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHHHH
Confidence 579999999999999999999999998888899998874 223456677788899999999997621 11
Q ss_pred -----CCCCCcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEe--CCHhHHHHHHH
Q psy8894 236 -----GPNAKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVT--RSPAQMGNELL 297 (306)
Q Consensus 236 -----~~~~KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~--~~~~el~~~~~ 297 (306)
...+||||+-..|.. .+.-...|++.|+-.. +|+++-...+.
T Consensus 334 ~a~~~~~~~~pivvrl~G~n--------------------~~~g~~~l~~~g~~~~~~~~~~~aa~~~v 382 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGNN--------------------AELGAKKLADSGLNIIAAKGLTDAAQQVV 382 (388)
T ss_dssp HHHHHHTCCSCEEEEEESTT--------------------HHHHHHHHHTTCSSEEECSSHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCCCC--------------------HHHHHHHHHHCCCceecCCCHHHHHHHHH
Confidence 126899999554433 2333578888886555 66666555443
No 196
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.29 E-value=0.011 Score=51.23 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee--cCe-ecc-----CCHHhhhhcCCCcEEEEecCch--
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH--LDL-PVF-----NTVKEARDATGAEATVIYVPPP-- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i--~Gi-p~y-----~sl~el~~~~~iDlavi~vp~~-- 98 (306)
.++|.|.|++|..|+...+.|.+.|++++.. ..+.... +. .++ ..+ .++.+... ++|++|-+....
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~-~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~D~vi~~ag~~~~ 97 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAM-VRNEEQGPELRERGASDIVVANLEEDFSHAFA--SIDAVVFAAGSGPH 97 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHTTCSEEEECCTTSCCGGGGT--TCSEEEECCCCCTT
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEE-ECChHHHHHHHhCCCceEEEcccHHHHHHHHc--CCCEEEECCCCCCC
Confidence 5789999999999999999999999997644 3221000 10 122 222 33444444 499999876532
Q ss_pred ------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 2566788888899998887665
No 197
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.29 E-value=0.0026 Score=58.01 Aligned_cols=115 Identities=14% Similarity=0.248 Sum_probs=71.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeec--cCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPV--FNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~--y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
+.++|+|+|+ |++|+...+.++.+|++++ ..||.....+ ..|... +.+++++... .|++++++|.....+.
T Consensus 154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~--aDvVi~~~p~~~i~~~ 229 (293)
T 3d4o_A 154 HGANVAVLGL-GRVGMSVARKFAALGAKVK-VGARESDLLARIAEMGMEPFHISKAAQELRD--VDVCINTIPALVVTAN 229 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTSEEEEGGGHHHHTTT--CSEEEECCSSCCBCHH
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHCCCeecChhhHHHHhcC--CCEEEECCChHHhCHH
Confidence 4689999998 9999999999999999865 6776531011 124443 3567777665 9999999997554322
Q ss_pred HHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE-ccCCCceecC
Q psy8894 104 IHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI-GPNCPGIIAP 153 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii-GPNc~Gi~~~ 153 (306)
.-+..+.| ..+++++.|-.+.+. +.+++.|++++ -||..|.+.|
T Consensus 230 ~l~~mk~~-~~lin~ar~~~~~~~-----~~a~~~Gv~~~~~~~l~~~v~p 274 (293)
T 3d4o_A 230 VLAEMPSH-TFVIDLASKPGGTDF-----RYAEKRGIKALLVPGLPGIVAP 274 (293)
T ss_dssp HHHHSCTT-CEEEECSSTTCSBCH-----HHHHHHTCEEEECCCHHHHHCH
T ss_pred HHHhcCCC-CEEEEecCCCCCCCH-----HHHHHCCCEEEECCCCCcccCH
Confidence 11222223 234444444333332 24577788775 5676666644
No 198
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.28 E-value=0.034 Score=45.22 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=57.9
Q ss_pred cccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCeecc-CC---HHhhhh--cCCCcEEE
Q psy8894 23 PNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---HLDLPVF-NT---VKEARD--ATGAEATV 92 (306)
Q Consensus 23 ~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i~Gip~y-~s---l~el~~--~~~iDlav 92 (306)
|+.... .++|+|+|+ |.+|+...+.|.+.|++++ .++++... +. -.|..++ .+ .+.+.+ -.+.|+++
T Consensus 13 ~~~~~~-~~~v~IiG~-G~iG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 13 MSKKQK-SKYIVIFGC-GRLGSLIANLASSSGHSVV-VVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp ----CC-CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred hhcccC-CCcEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 443333 468999998 9999999999999999865 55443210 11 1243322 22 222211 01489999
Q ss_pred EecCchhHHHHHHHHHH--cCCCEEEEecCCC
Q psy8894 93 IYVPPPGAAKAIHEALD--AEMPLIVCITEGI 122 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~--~Gi~~vvi~t~Gf 122 (306)
++++.......+.++++ .+...++..+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred EEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 99998777666555554 4677666655553
No 199
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.26 E-value=0.012 Score=55.29 Aligned_cols=88 Identities=14% Similarity=0.110 Sum_probs=59.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHH-HcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAI-EYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI 104 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~-~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~ 104 (306)
.++|+|||. |++|+...+.+. .+|++++ ..|+.....+ ..|+....+++++..+ .|++++++|... ...++
T Consensus 163 g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~--aDvVil~vp~~~~t~~li 238 (348)
T 2w2k_A 163 GHVLGAVGL-GAIQKEIARKAVHGLGMKLV-YYDVAPADAETEKALGAERVDSLEELARR--SDCVSVSVPYMKLTHHLI 238 (348)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSCCCHHHHHHHTCEECSSHHHHHHH--CSEEEECCCCSGGGTTCB
T ss_pred CCEEEEEEE-CHHHHHHHHHHHHhcCCEEE-EECCCCcchhhHhhcCcEEeCCHHHHhcc--CCEEEEeCCCChHHHHHh
Confidence 478999999 999999999999 8999976 6777542111 1266555689888776 999999999854 33333
Q ss_pred --HHHHHcCCCEEE-EecCC
Q psy8894 105 --HEALDAEMPLIV-CITEG 121 (306)
Q Consensus 105 --~e~~~~Gi~~vv-i~t~G 121 (306)
+......-..++ +.+.|
T Consensus 239 ~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 239 DEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp CHHHHHHSCTTEEEEECSCG
T ss_pred hHHHHhcCCCCCEEEECCCC
Confidence 122233444444 34444
No 200
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.24 E-value=0.0023 Score=55.62 Aligned_cols=89 Identities=20% Similarity=0.094 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHH-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIH- 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~- 105 (306)
.++|+|+|+ |++|+...+.+.+.|++++ .++++... +. -.|+... +++++.+. .|++++++|+....++++
T Consensus 28 ~~~I~iiG~-G~~G~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~~--~DvVi~av~~~~~~~v~~l 102 (215)
T 2vns_A 28 APKVGILGS-GDFARSLATRLVGSGFKVV-VGSRNPKRTARLFPSAAQVT-FQEEAVSS--PEVIFVAVFREHYSSLCSL 102 (215)
T ss_dssp -CCEEEECC-SHHHHHHHHHHHHTTCCEE-EEESSHHHHHHHSBTTSEEE-EHHHHTTS--CSEEEECSCGGGSGGGGGG
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCcee-cHHHHHhC--CCEEEECCChHHHHHHHHH
Confidence 468999996 9999999999999999865 56654310 11 1255554 67776654 999999999876655543
Q ss_pred -HHHHcCCCEEEEecCCCChh
Q psy8894 106 -EALDAEMPLIVCITEGIPQL 125 (306)
Q Consensus 106 -e~~~~Gi~~vvi~t~Gf~e~ 125 (306)
... .+ +.++.++.|.+.+
T Consensus 103 ~~~~-~~-~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQL-AG-KILVDVSNPTEQE 121 (215)
T ss_dssp HHHH-TT-CEEEECCCCCHHH
T ss_pred HHhc-CC-CEEEEeCCCcccc
Confidence 222 23 4556678887543
No 201
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.24 E-value=0.014 Score=51.89 Aligned_cols=89 Identities=13% Similarity=0.131 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--c---Ce----e-ccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--L---DL----P-VFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~---Gi----p-~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
++|+|+|+ |.+|......|.+.|+++. .++++... +.+ . |. . ...+. +..+. .|++++++|+..
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~--~d~vi~~v~~~~ 75 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQ-GWLRVPQPYCSVNLVETDGSIFNESLTANDP-DFLAT--SDLLLVTLKAWQ 75 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCSEEEEEEECTTSCEEEEEEEESCH-HHHHT--CSEEEECSCGGG
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEE-EEEcCccceeeEEEEcCCCceeeeeeeecCc-cccCC--CCEEEEEecHHh
Confidence 37999999 9999999999999999865 55554311 111 1 21 1 12333 33333 899999999999
Q ss_pred HHHHHHHHHHc-C-CCEEEEecCCCCh
Q psy8894 100 AAKAIHEALDA-E-MPLIVCITEGIPQ 124 (306)
Q Consensus 100 ~~~~~~e~~~~-G-i~~vvi~t~Gf~e 124 (306)
+.++++++... + =..++.++.|+..
T Consensus 76 ~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 76 VSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp HHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred HHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 99988877653 1 1235556888854
No 202
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=96.19 E-value=0.04 Score=52.62 Aligned_cols=109 Identities=13% Similarity=0.158 Sum_probs=80.5
Q ss_pred CCCCEEEEecChhhHHHHHHHHHhCCCceEEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEe-eCC----------
Q psy8894 167 QRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPETKGIILIGE-IGG---------- 235 (306)
Q Consensus 167 ~~G~va~vSqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~t~~I~ly~E-~~~---------- 235 (306)
..|+|++++-+|+++...++....+|.-...++-+|+.+ ..-.+.+.++.+..||++++|++-+= ++-
T Consensus 262 l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a-~~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii 340 (395)
T 2fp4_B 262 LDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGV-KESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340 (395)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSC-CHHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHH
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCC-CHHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHH
Confidence 479999999999999999999999998888999999874 22345667888889999999998542 221
Q ss_pred -----CCCCCcEEEEEecCCCCCCCCccCCcccccCCCCCHHHHHHHHHHcCCeEe--CCHhHHHHHH
Q psy8894 236 -----GPNAKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVT--RSPAQMGNEL 296 (306)
Q Consensus 236 -----~~~~KPVvvlk~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGvi~~--~~~~el~~~~ 296 (306)
...+||||+-..|.. .+.-.+.|++.|+-.. +++++-...+
T Consensus 341 ~a~~~~~~~~Pivvrl~G~n--------------------~~~g~~~L~~~gl~~~~~~~~~~Aa~~~ 388 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGTN--------------------VHEAQNILTNSGLPITSAVDLEDAAKKA 388 (395)
T ss_dssp HHHHHHTCCSCEEEEEEETT--------------------HHHHHHHHHHTCSCCEECSSHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEcCCCC--------------------HHHHHHHHHHCCCceEeCCCHHHHHHHH
Confidence 126799999665543 2223678888886544 6666555444
No 203
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.17 E-value=0.0071 Score=56.82 Aligned_cols=90 Identities=12% Similarity=0.047 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-------CeEEEeeCCCCC------Ccee----------------cCeeccCCHHh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-------TKVVGGVSPGKG------GKTH----------------LDLPVFNTVKE 81 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-------~~vv~~VnP~~~------g~~i----------------~Gip~y~sl~e 81 (306)
++|+|+|+ |.+|......|.+.| +++. .++++.. -+.+ .++....++++
T Consensus 22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 22 LKISILGS-GNWASAISKVVGTNAKNNYLFENEVR-MWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEE-EECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEE-EEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 57999999 999999888888878 7754 5554321 0000 13455567777
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHH----c-CC-CEEEEecCCCCh
Q psy8894 82 ARDATGAEATVIYVPPPGAAKAIHEALD----A-EM-PLIVCITEGIPQ 124 (306)
Q Consensus 82 l~~~~~iDlavi~vp~~~~~~~~~e~~~----~-Gi-~~vvi~t~Gf~e 124 (306)
+... .|++++++|+..+.++++++.. . +- +.++.++.|+..
T Consensus 100 a~~~--aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 100 VIND--ADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp HHTT--CSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred HHcC--CCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 6554 8999999999988888887654 2 11 245556678764
No 204
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.16 E-value=0.022 Score=52.14 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=61.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--cC--------------eeccCCHHhhhhcCCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--LD--------------LPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--~G--------------ip~y~sl~el~~~~~iDlavi~ 94 (306)
++|+|+|+ |.+|......|.+.|.++. .++++.. +.+ .| ++++.+.+++. +.|+++++
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~---~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGA-GALGLYYGALLQRSGEDVH-FLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEEIG---PMDLVLVG 76 (312)
T ss_dssp -CEEEECC-STTHHHHHHHHHHTSCCEE-EECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHHHC---CCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEE-EEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHHcC---CCCEEEEe
Confidence 57999999 9999999888988898865 5554321 111 11 22345566543 38999999
Q ss_pred cCchhHHHHHHHHHHc-CC-CEEEEecCCCCh
Q psy8894 95 VPPPGAAKAIHEALDA-EM-PLIVCITEGIPQ 124 (306)
Q Consensus 95 vp~~~~~~~~~e~~~~-Gi-~~vvi~t~Gf~e 124 (306)
||+....++++++... +- ..++.++.|+..
T Consensus 77 vk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~ 108 (312)
T 3hn2_A 77 LKTFANSRYEELIRPLVEEGTQILTLQNGLGN 108 (312)
T ss_dssp CCGGGGGGHHHHHGGGCCTTCEEEECCSSSSH
T ss_pred cCCCCcHHHHHHHHhhcCCCCEEEEecCCCCc
Confidence 9999999999888653 22 356667889863
No 205
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.16 E-value=0.0045 Score=58.43 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=63.5
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC---------ce-----------------ecC--eeccC
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG---------KT-----------------HLD--LPVFN 77 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g---------~~-----------------i~G--ip~y~ 77 (306)
.....+|+|+|+ |+.|+...+.+.++ ++++++.-+|...- +. +.| ++++.
T Consensus 14 ~~~~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 14 LYFQGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQ 92 (354)
T ss_dssp ----CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEEC
T ss_pred cCcceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEe
Confidence 334568999999 99999999988887 89988665543210 00 112 33453
Q ss_pred --CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 78 --TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 78 --sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
+.++++- +.++|+++.++|.....+.+...++.|+|.+||
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVI 135 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVII 135 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEE
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEE
Confidence 4566641 124999999999999999999999999998775
No 206
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.12 E-value=0.011 Score=55.53 Aligned_cols=84 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-ecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHH--H
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-HLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAI--H 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~--~ 105 (306)
-++|+|+|. |++|+...+.++.+|++++ ..||.....+ ..|...+.+++++..+ .|++++++|. +.+..++ +
T Consensus 173 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~ 248 (345)
T 4g2n_A 173 GRRLGIFGM-GRIGRAIATRARGFGLAIH-YHNRTRLSHALEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHD 248 (345)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHTTTCEEE-EECSSCCCHHHHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHH
T ss_pred CCEEEEEEe-ChhHHHHHHHHHHCCCEEE-EECCCCcchhhhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHH
Confidence 578999999 9999999999999999976 6777641111 2266555689999886 9999999994 3444443 2
Q ss_pred HHHHcCCCEEEE
Q psy8894 106 EALDAEMPLIVC 117 (306)
Q Consensus 106 e~~~~Gi~~vvi 117 (306)
.....+-..+++
T Consensus 249 ~l~~mk~gailI 260 (345)
T 4g2n_A 249 RIAKIPEGAVVI 260 (345)
T ss_dssp HHHHSCTTEEEE
T ss_pred HHhhCCCCcEEE
Confidence 333455555554
No 207
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.11 E-value=0.014 Score=48.70 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=58.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEee-CCCCCCce--ecCeecc-------CCHHhhhhcCCCcEEEEecCch--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGV-SPGKGGKT--HLDLPVF-------NTVKEARDATGAEATVIYVPPP-- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V-nP~~~g~~--i~Gip~y-------~sl~el~~~~~iDlavi~vp~~-- 98 (306)
++|.|+|++|..|+...+.|.+.|++++... ++... .+ ..++..+ .++.++.+. +|+++.+....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~ 80 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-PSEGPRPAHVVVGDVLQAADVDKTVAG--QDAVIVLLGTRND 80 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-CSSSCCCSEEEESCTTSHHHHHHHHTT--CSEEEECCCCTTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-ccccCCceEEEEecCCCHHHHHHHHcC--CCEEEECccCCCC
Confidence 6899999999999999999999999976442 22110 11 1122222 124444443 89999876543
Q ss_pred ---------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ---------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ---------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
....+++.|.+.+++.++.+++
T Consensus 81 ~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 3667788888889988886665
No 208
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.09 E-value=0.015 Score=55.58 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=69.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-C--eEEEeeCCCCCC-ce----ec-----Ceec-------cCCHHhhhhcCCCcE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-T--KVVGGVSPGKGG-KT----HL-----DLPV-------FNTVKEARDATGAEA 90 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-~--~vv~~VnP~~~g-~~----i~-----Gip~-------y~sl~el~~~~~iDl 90 (306)
++|+|+|+ |..|+.+.+.|.+.| . ++ ...+.+... ++ +. .+.. +.+++++.+..++|+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V-~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHI-TLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEE-EEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 58999999 899999999998886 2 54 354443200 00 10 1111 234555554334899
Q ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEecCCCChh-------HHHHHHHHHHHhcCCe-EEccCC
Q psy8894 91 TVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQL-------DMVKVKHRLIRQSKSR-LIGPNC 147 (306)
Q Consensus 91 avi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~-------~~~~~~~~~ar~~gi~-iiGPNc 147 (306)
+|.++|+.....+++.|++.|++.+- ++++... .....+.+.+++.|+. +.|++|
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vvD--~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYLD--TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEE--SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBT
T ss_pred EEECCCcccChHHHHHHHHhCCCEEE--ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCC
Confidence 99999999999999999999999653 3333211 1111222356777764 455554
No 209
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.08 E-value=0.025 Score=55.01 Aligned_cols=65 Identities=20% Similarity=0.235 Sum_probs=45.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCC-ce----------------e-----cCeeccCCHHhhhhcC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGG-KT----------------H-----LDLPVFNTVKEARDAT 86 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g-~~----------------i-----~Gip~y~sl~el~~~~ 86 (306)
++|+|+|+ |.+|......|.+. |++++ .+|.+... +. + .++....++++....
T Consensus 6 mkI~VIG~-G~mG~~lA~~La~~g~G~~V~-~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~- 82 (467)
T 2q3e_A 6 KKICCIGA-GYVGGPTCSVIAHMCPEIRVT-VVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE- 82 (467)
T ss_dssp CEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc-
Confidence 68999998 99999998888887 78865 55554200 01 0 245555677766655
Q ss_pred CCcEEEEecCchh
Q psy8894 87 GAEATVIYVPPPG 99 (306)
Q Consensus 87 ~iDlavi~vp~~~ 99 (306)
.|++++++|...
T Consensus 83 -aDvViiaVptp~ 94 (467)
T 2q3e_A 83 -ADLVFISVNTPT 94 (467)
T ss_dssp -CSEEEECCCCCB
T ss_pred -CCEEEEEcCCch
Confidence 899999987544
No 210
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.08 E-value=0.016 Score=55.52 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=62.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH--H
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI--H 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~--~ 105 (306)
+-++++|+|. |++|+...+.++.+|++++ ..||... ....+...+.+++++... .|++++++|.. .+..++ +
T Consensus 144 ~gktlGiIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~ 218 (404)
T 1sc6_A 144 RGKKLGIIGY-GHIGTQLGILAESLGMYVY-FYDIENK-LPLGNATQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAK 218 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CCCTTCEECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHH
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EEcCCch-hccCCceecCCHHHHHhc--CCEEEEccCCChHHHHHhhHH
Confidence 3578999999 9999999999999999976 6787541 223345556689999887 99999999975 333333 2
Q ss_pred HHHHcCCCEEE-EecCCC
Q psy8894 106 EALDAEMPLIV-CITEGI 122 (306)
Q Consensus 106 e~~~~Gi~~vv-i~t~Gf 122 (306)
.+....-..++ +.+.|-
T Consensus 219 ~l~~mk~ga~lIN~aRg~ 236 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGT 236 (404)
T ss_dssp HHHHSCTTEEEEECSCSS
T ss_pred HHhhcCCCeEEEECCCCh
Confidence 23334444444 455553
No 211
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.06 E-value=0.0062 Score=56.51 Aligned_cols=72 Identities=10% Similarity=0.138 Sum_probs=53.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC-CCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP-GKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP-~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~ 104 (306)
..++|+|+|. |++|+...+.++.+|++++ ..|| ..... ...|+....+++++... .|++++++|... +..++
T Consensus 145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 145 DNKTLGIYGF-GSIGQALAKRAQGFDMDID-YFDTHRASSSDEASYQATFHDSLDSLLSV--SQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSCCCHHHHHHHTCEECSSHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcChhhhhhcCcEEcCCHHHHHhh--CCEEEEeccCchHHHhhc
Confidence 3578999999 9999999999999999976 7787 54111 11366555589998876 999999999642 34444
No 212
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.05 E-value=0.0053 Score=57.88 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=61.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC------CeEEEeeCCCCCCceec-------C---eeccC-CHHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG------TKVVGGVSPGKGGKTHL-------D---LPVFN-TVKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g------~~vv~~VnP~~~g~~i~-------G---ip~y~-sl~el~~~~~iDlavi 93 (306)
.+|+|+||+|..|+...+.|.+++ ++++.....+..|+.+. + +.+.+ +.+++. ++|+++.
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~---~~DvVf~ 86 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLG---GHDAVFL 86 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHT---TCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhc---CCCEEEE
Confidence 689999999999999999988876 46665554443333221 1 12111 122222 4999999
Q ss_pred ecCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 94 YVPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 94 ~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
++|...+.+.++.+ +.|++. +..|+-|.
T Consensus 87 alg~~~s~~~~~~~-~~G~~v-IDlSa~~R 114 (352)
T 2nqt_A 87 ALPHGHSAVLAQQL-SPETLI-IDCGADFR 114 (352)
T ss_dssp CCTTSCCHHHHHHS-CTTSEE-EECSSTTT
T ss_pred CCCCcchHHHHHHH-hCCCEE-EEECCCcc
Confidence 99999999999999 999874 44677665
No 213
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.03 E-value=0.0011 Score=57.53 Aligned_cols=90 Identities=17% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--ecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--HLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
...++|+|+|+ |++|+...+.|.+.|+++. .++++...+. ..|+... +++++.+. .|++++++|+..+.+++
T Consensus 17 ~~~~~I~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~g~~~~-~~~~~~~~--aDvVilav~~~~~~~v~- 90 (201)
T 2yjz_A 17 EKQGVVCIFGT-GDFGKSLGLKMLQCGYSVV-FGSRNPQVSSLLPRGAEVL-CYSEAASR--SDVIVLAVHREHYDFLA- 90 (201)
Confidence 34568999998 9999999999988888854 5565431111 1255544 66666654 89999999998776665
Q ss_pred HHHHcCC-CEEEEecCCCC
Q psy8894 106 EALDAEM-PLIVCITEGIP 123 (306)
Q Consensus 106 e~~~~Gi-~~vvi~t~Gf~ 123 (306)
+.....- +.++.++.|++
T Consensus 91 ~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 91 ELADSLKGRVLIDVSNNQK 109 (201)
Confidence 3222111 23455677875
No 214
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.03 E-value=0.018 Score=45.28 Aligned_cols=109 Identities=15% Similarity=0.180 Sum_probs=64.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCee-ccC---CHHhhhh--cCCCcEEEEecCch--
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLP-VFN---TVKEARD--ATGAEATVIYVPPP-- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip-~y~---sl~el~~--~~~iDlavi~vp~~-- 98 (306)
.++|+|+|+ |..|+...+.+.+.|++++ .++++... +. ..|.. ++. +.+.+.+ -.++|+++++++..
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVL-AVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCE-EEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 357999999 9999999999999998855 45443200 00 11222 222 2222221 12489999999864
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCC-eEEccCC
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKS-RLIGPNC 147 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi-~iiGPNc 147 (306)
....+++.+.+.|++.++..+.+. ...+ ..++.|. .++.|..
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~~---~~~~----~l~~~g~~~vi~p~~ 126 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQNY---YHHK----VLEKIGADRIIHPEK 126 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSH---HHHH----HHHHHTCSEEECHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCH---HHHH----HHHHcCCCEEECccH
Confidence 345566777788888776655442 1112 2344665 5666653
No 215
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.02 E-value=0.041 Score=50.84 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=55.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecC-------------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVP------------- 96 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp------------- 96 (306)
++|.|.|++|-.|+...+.|.+.|+ +++ .++... -..++.++.+. +|+++-+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~-~~d~~~---------d~~~l~~~~~~--~d~Vih~a~~~~~~~~~~~~~~ 68 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIF-EVHRQT---------KEEELESALLK--ADFIVHLAGVNRPEHDKEFSLG 68 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEE-ECCTTC---------CHHHHHHHHHH--CSEEEECCCSBCTTCSTTCSSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEE-EECCCC---------CHHHHHHHhcc--CCEEEECCcCCCCCCHHHHHHH
Confidence 4799999999999999999999998 776 455421 12235566555 899887642
Q ss_pred -chhHHHHHHHHHHcCCC-EEEEecC
Q psy8894 97 -PPGAAKAIHEALDAEMP-LIVCITE 120 (306)
Q Consensus 97 -~~~~~~~~~e~~~~Gi~-~vvi~t~ 120 (306)
-..+..+++.|.+.|++ .++.+++
T Consensus 69 n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 69 NVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 23356688888889987 6665554
No 216
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=96.02 E-value=0.018 Score=54.50 Aligned_cols=107 Identities=15% Similarity=0.181 Sum_probs=71.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEe---------------eCCCCCCceecCeeccC-----------CHHhhh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGG---------------VSPGKGGKTHLDLPVFN-----------TVKEAR 83 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~---------------VnP~~~g~~i~Gip~y~-----------sl~el~ 83 (306)
++|+|+|++|..|+...+.+.++ .|++++. .+|+. -.+.+-..|. .+.++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~--v~v~~~~~~~~~l~~~~~G~~~l~el~ 81 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKN--VAITGDVEFEDSSINVWKGSHSIEEML 81 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCE--EEECSSCCCCCSSSEEEESTTHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCE--EEEccHHHHHHHHHHHccCHHHHHHHh
Confidence 78999999999999888888776 6887765 22322 0111112221 124554
Q ss_pred hcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhH--HHHHHHHHHHhcCCeEE
Q psy8894 84 DATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLD--MVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 84 ~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~--~~~~~~~~ar~~gi~ii 143 (306)
...++|+++.+++......-...++++|.+. . ++.. |.- .-++..++++++|.+++
T Consensus 82 ~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~v-a-LANK--EsLV~aG~li~~~a~~~g~~ll 139 (376)
T 3a06_A 82 EALKPDITMVAVSGFSGLRAVLASLEHSKRV-C-LANK--ESLVCGGFLVKKKLKEKGTELI 139 (376)
T ss_dssp HHHCCSEEEECCCSTTHHHHHHHHHHHCSEE-E-ECCS--HHHHHHHHHHHHHHHHHCCEEE
T ss_pred cCCCCCEEEEEeeCHHHHHHHHHHHHCCCEE-E-EeCh--HHHHhhHHHHHHHHHHcCCEEE
Confidence 3224999999999999999999999999664 3 3544 321 12334457888888775
No 217
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.93 E-value=0.043 Score=48.71 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=60.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
.++|+|||+ |++|....+.|.+.|++++ .++.. +++. . .| ++++|.....++++++..
T Consensus 6 ~mkI~IIG~-G~~G~sLA~~L~~~G~~V~-~~~~~---------------~~~~-~--aD--ilavP~~ai~~vl~~l~~ 63 (232)
T 3dfu_A 6 RLRVGIFDD-GSSTVNMAEKLDSVGHYVT-VLHAP---------------EDIR-D--FE--LVVIDAHGVEGYVEKLSA 63 (232)
T ss_dssp CCEEEEECC-SCCCSCHHHHHHHTTCEEE-ECSSG---------------GGGG-G--CS--EEEECSSCHHHHHHHHHT
T ss_pred CcEEEEEee-CHHHHHHHHHHHHCCCEEE-EecCH---------------HHhc-c--CC--EEEEcHHHHHHHHHHHHH
Confidence 358999999 9999999999999999876 45541 3343 2 78 999999999999988876
Q ss_pred c-CCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 110 A-EMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 110 ~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
. .-..+++-++|-...+..+ . +++.|.+++|
T Consensus 64 ~l~~g~ivvd~sgs~~~~vl~---~-~~~~g~~fvg 95 (232)
T 3dfu_A 64 FARRGQMFLHTSLTHGITVMD---P-LETSGGIVMS 95 (232)
T ss_dssp TCCTTCEEEECCSSCCGGGGH---H-HHHTTCEEEE
T ss_pred hcCCCCEEEEECCcCHHHHHH---H-HHhCCCcEEE
Confidence 4 3344554445543322111 1 2355666664
No 218
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.91 E-value=0.031 Score=54.21 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=63.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEe-eCCCCCCcee----------------------cCeeccCCHHhhhhcC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGG-VSPGKGGKTH----------------------LDLPVFNTVKEARDAT 86 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~-VnP~~~g~~i----------------------~Gip~y~sl~el~~~~ 86 (306)
..+|+|+|. |.+|......|.+.|+++++. +|+... +.+ ..+....++++..+.
T Consensus 8 ~~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv-~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~- 84 (446)
T 4a7p_A 8 SVRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKI-ELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD- 84 (446)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH-HHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT-
T ss_pred ceEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc-
Confidence 468999999 999998888999999997632 444421 111 113445567666654
Q ss_pred CCcEEEEecCch-----------hHHHHHHHHHHc-CCCEEEEecCCCChhHHHHHH
Q psy8894 87 GAEATVIYVPPP-----------GAAKAIHEALDA-EMPLIVCITEGIPQLDMVKVK 131 (306)
Q Consensus 87 ~iDlavi~vp~~-----------~~~~~~~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~ 131 (306)
.|++++++|.. .+.++++...+. .-..+++..++++....+++.
T Consensus 85 -aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~ 140 (446)
T 4a7p_A 85 -ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVE 140 (446)
T ss_dssp -CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHH
T ss_pred -CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHH
Confidence 89999997654 377777776653 233445556666654444443
No 219
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.91 E-value=0.011 Score=55.09 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-eecCeeccCCHHhhhhcCCCcEEEEecCc-hhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-THLDLPVFNTVKEARDATGAEATVIYVPP-PGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i~Gip~y~sl~el~~~~~iDlavi~vp~-~~~~~~~ 104 (306)
..++|+|+|. |++|+...+.++.+|++++ ..|+..... .......+.+++++..+ .|++++++|. +.+..++
T Consensus 136 ~gktvGIiGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~~--aDvV~l~lPlt~~t~~li 209 (324)
T 3evt_A 136 TGQQLLIYGT-GQIGQSLAAKASALGMHVI-GVNTTGHPADHFHETVAFTATADALAT--ANFIVNALPLTPTTHHLF 209 (324)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSCCCCTTCSEEEEGGGCHHHHHH--CSEEEECCCCCGGGTTCB
T ss_pred cCCeEEEECc-CHHHHHHHHHHHhCCCEEE-EECCCcchhHhHhhccccCCHHHHHhh--CCEEEEcCCCchHHHHhc
Confidence 3578999999 9999999999999999976 566643111 11112235678898876 9999999994 3444444
No 220
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.87 E-value=0.0083 Score=57.39 Aligned_cols=89 Identities=12% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~ 104 (306)
.-++|+|+|. |++|+...+.++.+|++++ ..|+.....+ ..|+..+.+++++..+ .|++++++|.. .+..++
T Consensus 190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~~~~~~~~~~G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li 265 (393)
T 2nac_A 190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLH-YTDRHRLPESVEKELNLTWHATREDMYPV--CDVVTLNCPLHPETEHMI 265 (393)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCCHHHHHHHTCEECSSHHHHGGG--CSEEEECSCCCTTTTTCB
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EEcCCccchhhHhhcCceecCCHHHHHhc--CCEEEEecCCchHHHHHh
Confidence 3578999999 9999999999999999976 6676541121 2466666789999876 99999999953 334444
Q ss_pred -HHHHH-cCCCEEEE-ecCC
Q psy8894 105 -HEALD-AEMPLIVC-ITEG 121 (306)
Q Consensus 105 -~e~~~-~Gi~~vvi-~t~G 121 (306)
++.++ ..-..+++ .+.|
T Consensus 266 ~~~~l~~mk~gailIN~aRG 285 (393)
T 2nac_A 266 NDETLKLFKRGAYIVNTARG 285 (393)
T ss_dssp SHHHHTTSCTTEEEEECSCG
T ss_pred hHHHHhhCCCCCEEEECCCc
Confidence 23333 34444443 4444
No 221
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.87 E-value=0.011 Score=55.07 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=49.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
.++|+|+|. |++|+...+.++.+|++++ ..||... ........|.+++++... .|++++++|...
T Consensus 145 g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~~--aDvV~~~~P~~~ 209 (333)
T 1dxy_A 145 QQTVGVMGT-GHIGQVAIKLFKGFGAKVI-AYDPYPM-KGDHPDFDYVSLEDLFKQ--SDVIDLHVPGIE 209 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-SSCCTTCEECCHHHHHHH--CSEEEECCCCCG
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhhHhccccCCHHHHHhc--CCEEEEcCCCch
Confidence 578999999 9999999999999999976 6776542 111111235689998876 999999999754
No 222
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.87 E-value=0.2 Score=44.06 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=56.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--ecCeecc-CCHHhhhhcCCCcEEEEecCch-----hHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--HLDLPVF-NTVKEARDATGAEATVIYVPPP-----GAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--i~Gip~y-~sl~el~~~~~iDlavi~vp~~-----~~~~ 102 (306)
++|.|.|+ |..|+...+.|++.|+++++.......... -.++..+ -++.++. -.++|++|-+.... ....
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~~~~~~~~~ 83 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-LDGVTHLLISTAPDSGGDPVLAA 83 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-CTTCCEEEECCCCBTTBCHHHHH
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-cCCCCEEEECCCccccccHHHHH
Confidence 68999998 999999999999999998755432210001 1234333 2444432 23599999876432 3455
Q ss_pred HHHHHHH--cCCCEEEEecC
Q psy8894 103 AIHEALD--AEMPLIVCITE 120 (306)
Q Consensus 103 ~~~e~~~--~Gi~~vvi~t~ 120 (306)
+++.|.+ .+++.++.+++
T Consensus 84 l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 84 LGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHhhcCCceEEEEeec
Confidence 6677777 68888776554
No 223
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=95.86 E-value=0.00073 Score=61.01 Aligned_cols=89 Identities=9% Similarity=-0.014 Sum_probs=54.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
++|+|||+ |++|+...+.+.+. ++++...|++... + +..|. .+.+++++.+. .|++++++|+....+++++
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~--~DvVilav~~~~~~~v~~~ 77 (276)
T 2i76_A 3 LVLNFVGT-GTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPEL--NGVVFVIVPDRYIKTVANH 77 (276)
T ss_dssp -CCEEESC-CHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC-----CEEECSCTTTHHHHHTT
T ss_pred ceEEEEeC-CHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhc--CCEEEEeCChHHHHHHHHH
Confidence 47999998 99999888877766 7664456665310 1 12255 66777776554 8999999999998888877
Q ss_pred HHHcCCCEEEEecCCCChh
Q psy8894 107 ALDAEMPLIVCITEGIPQL 125 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~Gf~e~ 125 (306)
+...+ +.++..+++.+.+
T Consensus 78 l~~~~-~ivi~~s~~~~~~ 95 (276)
T 2i76_A 78 LNLGD-AVLVHCSGFLSSE 95 (276)
T ss_dssp TCCSS-CCEEECCSSSCGG
T ss_pred hccCC-CEEEECCCCCcHH
Confidence 64222 3344445566554
No 224
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.85 E-value=0.031 Score=49.93 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC--c---------eecCeeccC-------CHHhhhhcCCCcEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG--K---------THLDLPVFN-------TVKEARDATGAEAT 91 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g--~---------~i~Gip~y~-------sl~el~~~~~iDla 91 (306)
.++|+|+|++|..|+...+.|.+.|++++..+...... . ...|+.++. ++.++.+. +|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~--~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN--VDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT--CSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC--CCEE
Confidence 46799999999999999999999999876543321100 0 012333321 24444444 9999
Q ss_pred EEecCc---hhHHHHHHHHHHcC-CCEEEEec
Q psy8894 92 VIYVPP---PGAAKAIHEALDAE-MPLIVCIT 119 (306)
Q Consensus 92 vi~vp~---~~~~~~~~e~~~~G-i~~vvi~t 119 (306)
+.+.+. .....+++.|.+.| ++.++ ++
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S 112 (308)
T 1qyc_A 82 ISTVGSLQIESQVNIIKAIKEVGTVKRFF-PS 112 (308)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCSEEE-CS
T ss_pred EECCcchhhhhHHHHHHHHHhcCCCceEe-ec
Confidence 988764 34677888888898 99876 44
No 225
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=95.82 E-value=0.011 Score=55.05 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..++|+|+|. |++|+...+.++.+|++++ ..||... ........|.+++++..+ .|++++++|..
T Consensus 145 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~~--aDvV~~~~p~t 209 (331)
T 1xdw_A 145 RNCTVGVVGL-GRIGRVAAQIFHGMGATVI-GEDVFEI-KGIEDYCTQVSLDEVLEK--SDIITIHAPYI 209 (331)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CSCTTTCEECCHHHHHHH--CSEEEECCCCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-HHHHhccccCCHHHHHhh--CCEEEEecCCc
Confidence 3578999999 9999999999999999976 6776542 111111235689898876 99999999864
No 226
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.81 E-value=0.0084 Score=55.42 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=50.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
..++|+|+|. |++|+...+.++.+|++++ ..||..... ...|.. +.+++++... .|++++++|...
T Consensus 141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~~--aDvVvl~~P~~~ 208 (313)
T 2ekl_A 141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVL-AYDILDIREKAEKINAK-AVSLEELLKN--SDVISLHVTVSK 208 (313)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCE-ECCHHHHHHH--CSEEEECCCCCT
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCcchhHHHhcCce-ecCHHHHHhh--CCEEEEeccCCh
Confidence 3578999999 9999999999999999976 677764211 123555 3479888876 999999999643
No 227
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.81 E-value=0.007 Score=54.84 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-----C-CeEEEeeCCCCCCce--e-cCeecc--------------CCHHhhhhcC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-----G-TKVVGGVSPGKGGKT--H-LDLPVF--------------NTVKEARDAT 86 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-----g-~~vv~~VnP~~~g~~--i-~Gip~y--------------~sl~el~~~~ 86 (306)
+++|+|+|+ |.+|......|.+. | +++. .+++...-+. - .|+.+. .+.+.+ .
T Consensus 8 ~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-- 82 (317)
T 2qyt_A 8 PIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVS-WIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEV-G-- 82 (317)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEE-EECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHH-C--
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEE-EEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCcccc-C--
Confidence 468999999 99999888888887 8 7765 5665210011 1 344433 233332 3
Q ss_pred CCcEEEEecCchhHHHHHHHHHHc-CC-CEEEEecCCCCh
Q psy8894 87 GAEATVIYVPPPGAAKAIHEALDA-EM-PLIVCITEGIPQ 124 (306)
Q Consensus 87 ~iDlavi~vp~~~~~~~~~e~~~~-Gi-~~vvi~t~Gf~e 124 (306)
+.|++++++|+..+.+++++.... +- +.++.++.|+..
T Consensus 83 ~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 83 TVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp CEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred CCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 389999999999998888877543 11 234456788754
No 228
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.80 E-value=0.014 Score=54.61 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=63.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHH---c-CCeEEEeeCC-------------CCCCc----------e--ecC--eecc--C
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIE---Y-GTKVVGGVSP-------------GKGGK----------T--HLD--LPVF--N 77 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~---~-g~~vv~~VnP-------------~~~g~----------~--i~G--ip~y--~ 77 (306)
.+|+|+|+ |+.|+...+.+.+ + ++++++.-+. ...|. . +.| ++++ .
T Consensus 3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 81 (339)
T 2x5j_O 3 VRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecC
Confidence 58999999 9999999998887 5 8888765433 00010 0 123 3444 2
Q ss_pred CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 78 TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 78 sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
+.++++- +.++|+++.|+|.....+.+...++.|+|.++|=.++
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 4566641 1149999999999999999999999999988763344
No 229
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.78 E-value=0.02 Score=53.76 Aligned_cols=89 Identities=11% Similarity=0.008 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCe---EEEeeCCCCCCceec--Cee-ccCCHHh-hhhcCCCcEEEEecCchhHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTK---VVGGVSPGKGGKTHL--DLP-VFNTVKE-ARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~---vv~~VnP~~~g~~i~--Gip-~y~sl~e-l~~~~~iDlavi~vp~~~~~~~ 103 (306)
.+|+|+|++|-.|....+.|.++.|. +...-..+..|+.+. |.. .+.++++ ..+ ++|+++.|+|...+.+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~--~~Dvvf~a~~~~~s~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPS--GLDIALFSAGSAMSKVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCT--TCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhc--cCCEEEECCChHHHHHH
Confidence 47999999999999999988887554 444455666565442 210 1111111 112 49999999999999999
Q ss_pred HHHHHHcCCCEEEEecCCC
Q psy8894 104 IHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 104 ~~e~~~~Gi~~vvi~t~Gf 122 (306)
+..+.+.|++. +-.++-|
T Consensus 80 a~~~~~~G~~v-ID~Sa~~ 97 (344)
T 3tz6_A 80 APRFAAAGVTV-IDNSSAW 97 (344)
T ss_dssp HHHHHHTTCEE-EECSSTT
T ss_pred HHHHHhCCCEE-EECCCcc
Confidence 99999999974 4456655
No 230
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.78 E-value=0.022 Score=55.73 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=61.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--c-------C-------------eeccCCHHhhhhcC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--L-------D-------------LPVFNTVKEARDAT 86 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~-------G-------------ip~y~sl~el~~~~ 86 (306)
.++|+|+|+ |.+|......|.+.|++++ .+|.+... +.+ . | +....++++..+.
T Consensus 8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~-~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~- 84 (478)
T 2y0c_A 8 SMNLTIIGS-GSVGLVTGACLADIGHDVF-CLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH- 84 (478)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH-
T ss_pred CceEEEECc-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc-
Confidence 578999999 9999988888999999976 55543200 000 1 1 3344456555544
Q ss_pred CCcEEEEecCc----------hhHHHHHHHHHH-cCCCEEEEecCCCCh
Q psy8894 87 GAEATVIYVPP----------PGAAKAIHEALD-AEMPLIVCITEGIPQ 124 (306)
Q Consensus 87 ~iDlavi~vp~----------~~~~~~~~e~~~-~Gi~~vvi~t~Gf~e 124 (306)
.|++++++|. ..+.++++.... ..-..+++..++.+.
T Consensus 85 -aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~ 132 (478)
T 2y0c_A 85 -GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPV 132 (478)
T ss_dssp -CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCT
T ss_pred -CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCC
Confidence 8999999998 788888887765 333455555666644
No 231
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.75 E-value=0.012 Score=55.47 Aligned_cols=85 Identities=9% Similarity=0.105 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~ 104 (306)
.-++|+|+|. |++|+...+.++.+|++++ ..|+.....+ ..|+..+.+++++..+ .|++++++|.. .+..++
T Consensus 163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li 238 (351)
T 3jtm_A 163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLL-YHDRLQMAPELEKETGAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMF 238 (351)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCEEE-EECSSCCCHHHHHHHCCEECSCHHHHGGG--CSEEEECSCCCTTTTTCB
T ss_pred cCCEEeEEEe-CHHHHHHHHHHHHCCCEEE-EeCCCccCHHHHHhCCCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhh
Confidence 3578999999 9999999999999999975 6676531111 2466666789999887 99999999953 333333
Q ss_pred --HHHHHcCCCEEEE
Q psy8894 105 --HEALDAEMPLIVC 117 (306)
Q Consensus 105 --~e~~~~Gi~~vvi 117 (306)
+......-..+++
T Consensus 239 ~~~~l~~mk~gailI 253 (351)
T 3jtm_A 239 NKELIGKLKKGVLIV 253 (351)
T ss_dssp SHHHHHHSCTTEEEE
T ss_pred cHHHHhcCCCCCEEE
Confidence 2233344455444
No 232
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.74 E-value=0.02 Score=53.54 Aligned_cols=88 Identities=15% Similarity=0.024 Sum_probs=63.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC-------------CCCC----------cee--cC--eeccC--CHHhh
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP-------------GKGG----------KTH--LD--LPVFN--TVKEA 82 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP-------------~~~g----------~~i--~G--ip~y~--sl~el 82 (306)
+|+|+|+ |+.|+...+.+.++++++++.-++ +..| +.+ .| ++++. +.+++
T Consensus 2 kVgInG~-G~IGr~vlr~l~~~~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l 80 (331)
T 2g82_O 2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (331)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhhC
Confidence 7999999 999999999877778888754332 1112 111 23 45552 46666
Q ss_pred hh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecC
Q psy8894 83 RD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 83 ~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+- +.++|+++.++|.....+.+...++.|.|.+|+=.+
T Consensus 81 ~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsap 119 (331)
T 2g82_O 81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP 119 (331)
T ss_dssp CTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred cccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCC
Confidence 52 125899999999999999999999999999886333
No 233
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.73 E-value=0.013 Score=54.19 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~ 104 (306)
+.++|+|+|. |++|+...+.++.+|++++ ..||.....+ + .+.+++++..+ .|++++++|... ...++
T Consensus 143 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~---~-~~~~l~ell~~--aDvV~l~~p~~~~t~~li 211 (311)
T 2cuk_A 143 QGLTLGLVGM-GRIGQAVAKRALAFGMRVV-YHARTPKPLP---Y-PFLSLEELLKE--ADVVSLHTPLTPETHRLL 211 (311)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCSSS---S-CBCCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred CCCEEEEEEE-CHHHHHHHHHHHHCCCEEE-EECCCCcccc---c-ccCCHHHHHhh--CCEEEEeCCCChHHHhhc
Confidence 3578999999 9999999999999999975 6777642122 2 36789998876 899999999863 44444
No 234
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.69 E-value=0.033 Score=49.86 Aligned_cols=85 Identities=16% Similarity=0.152 Sum_probs=57.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c---------eecCeeccC-------CHHhhhhcCCCcEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K---------THLDLPVFN-------TVKEARDATGAEATV 92 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~---------~i~Gip~y~-------sl~el~~~~~iDlav 92 (306)
.++|+|+|++|..|+...+.|.+.|+++++........ . ...|+.++. ++.++.+ ++|+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEE
Confidence 46799999999999999999999999987543321100 0 012333321 2444444 499999
Q ss_pred EecCc-------hhHHHHHHHHHHcC-CCEEE
Q psy8894 93 IYVPP-------PGAAKAIHEALDAE-MPLIV 116 (306)
Q Consensus 93 i~vp~-------~~~~~~~~e~~~~G-i~~vv 116 (306)
.+... .....+++.|.+.| ++.++
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 87653 35677888898999 99876
No 235
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.69 E-value=0.1 Score=50.94 Aligned_cols=90 Identities=21% Similarity=0.182 Sum_probs=56.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCC-cee--c-------------------CeeccCCHHhhhhc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGG-KTH--L-------------------DLPVFNTVKEARDA 85 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g-~~i--~-------------------Gip~y~sl~el~~~ 85 (306)
.++|+|+|+ |.+|......|.+. |++++ .+|.+... +.+ . ++....++.+....
T Consensus 9 ~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 9 VSKVVCVGA-GYVGGPTCAMIAHKCPHITVT-VVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence 368999999 99999888888877 78876 55543200 000 0 23344455555554
Q ss_pred CCCcEEEEecCchh---------------HHHHHHHHHHc-CCCEEEEecCCCC
Q psy8894 86 TGAEATVIYVPPPG---------------AAKAIHEALDA-EMPLIVCITEGIP 123 (306)
Q Consensus 86 ~~iDlavi~vp~~~---------------~~~~~~e~~~~-Gi~~vvi~t~Gf~ 123 (306)
.|++++++|... +.++++..... .-..+++..+..+
T Consensus 87 --aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 87 --ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp --CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred --CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 899999987643 66667666553 3345665544444
No 236
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.64 E-value=0.018 Score=54.95 Aligned_cols=83 Identities=19% Similarity=0.054 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCe------------------eccCCHHhhhhcCCCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDL------------------PVFNTVKEARDATGAE 89 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gi------------------p~y~sl~el~~~~~iD 89 (306)
++|+|+|+ |.+|......|.+ |++++ .+|.+... +.+ .+. ....++++.... .|
T Consensus 1 MkI~VIG~-G~vG~~~A~~La~-G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~--aD 75 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLSL-QNEVT-IVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE--AE 75 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHH--CS
T ss_pred CEEEEECC-CHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcC--CC
Confidence 37999999 9999988888888 98865 56554200 011 122 334456555554 89
Q ss_pred EEEEecCch-----------hHHHHHHHHHHcCCCEEEEe
Q psy8894 90 ATVIYVPPP-----------GAAKAIHEALDAEMPLIVCI 118 (306)
Q Consensus 90 lavi~vp~~-----------~~~~~~~e~~~~Gi~~vvi~ 118 (306)
++++++|+. .+.++++......-..+++.
T Consensus 76 vviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~ 115 (402)
T 1dlj_A 76 LVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLII 115 (402)
T ss_dssp EEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEE
T ss_pred EEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEE
Confidence 999999997 47777777665444455554
No 237
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.64 E-value=0.036 Score=50.29 Aligned_cols=91 Identities=13% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCCcee---------cCeecc-------CCHHhhhhcCCCcEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGGKTH---------LDLPVF-------NTVKEARDATGAEAT 91 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g~~i---------~Gip~y-------~sl~el~~~~~iDla 91 (306)
..++|.|.|++|-.|+...+.|.+.|++++.... +.. ..+. .++..+ .++.++.+..++|++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS-KREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS-CTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc-hHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 4578999999999999999999999999774422 221 0110 022222 234445443359999
Q ss_pred EEecCc------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 92 VIYVPP------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 92 vi~vp~------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
|-+... ..+..+++.|.+.+++.++.+++
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 876532 12445778888899988887765
No 238
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.63 E-value=0.046 Score=52.58 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=60.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH--H
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI--H 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~--~ 105 (306)
+-++++|+|. |++|+...+.++.+|++++ ..||... ....+...+.+++++..+ .|++++++|... +..++ +
T Consensus 155 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~yd~~~~-~~~~~~~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~ 229 (416)
T 3k5p_A 155 RGKTLGIVGY-GNIGSQVGNLAESLGMTVR-YYDTSDK-LQYGNVKPAASLDELLKT--SDVVSLHVPSSKSTSKLITEA 229 (416)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTCC-CCBTTBEECSSHHHHHHH--CSEEEECCCC-----CCBCHH
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCcch-hcccCcEecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHH
Confidence 3578999999 9999999999999999976 6776531 223345556789999987 999999999743 33333 3
Q ss_pred HHHHcCCCEEEE-ecCCC
Q psy8894 106 EALDAEMPLIVC-ITEGI 122 (306)
Q Consensus 106 e~~~~Gi~~vvi-~t~Gf 122 (306)
......-..+++ ++.|-
T Consensus 230 ~l~~mk~gailIN~aRG~ 247 (416)
T 3k5p_A 230 KLRKMKKGAFLINNARGS 247 (416)
T ss_dssp HHHHSCTTEEEEECSCTT
T ss_pred HHhhCCCCcEEEECCCCh
Confidence 333445455444 45554
No 239
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.62 E-value=0.054 Score=49.57 Aligned_cols=88 Identities=13% Similarity=0.123 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--------ecCeecc-------CCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--------HLDLPVF-------NTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--------i~Gip~y-------~sl~el~~~~~iDlavi 93 (306)
.++|+|.|++|..|+.+.+.|++.|+++++.+....... . -.++.++ .++.++.++.++|++|-
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 468999999999999999999999998775543321000 0 0233322 23455555235999998
Q ss_pred ecCc---hhHHHHHHHHHHcC-CCEEEE
Q psy8894 94 YVPP---PGAAKAIHEALDAE-MPLIVC 117 (306)
Q Consensus 94 ~vp~---~~~~~~~~e~~~~G-i~~vvi 117 (306)
+... .....+++.|.+.| ++.++.
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 7664 45677888999999 998763
No 240
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=95.62 E-value=0.024 Score=54.10 Aligned_cols=109 Identities=16% Similarity=0.065 Sum_probs=68.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-C-CeEEEe-eCCCCC---------C-c--eecC---------------eeccC--
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-G-TKVVGG-VSPGKG---------G-K--THLD---------------LPVFN-- 77 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g-~~vv~~-VnP~~~---------g-~--~i~G---------------ip~y~-- 77 (306)
.++|+|+|++|..|+..++.+.++ + |++++. .+.+.. + + .+.+ ..++.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g~ 83 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 83 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeCc
Confidence 378999999999999988888876 4 787644 332210 0 0 0001 11211
Q ss_pred -CHHhhhhcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhH--HHHHHHHHHHhcCCeEE
Q psy8894 78 -TVKEARDATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLD--MVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 78 -sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~--~~~~~~~~ar~~gi~ii 143 (306)
.+.++.... +|+++.+++.........+|+++|.+. ++ ... |.. .-.++.++|+++|+.++
T Consensus 84 ~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~V-vl-ANK--E~lv~~G~~l~~~A~~~gv~li 147 (388)
T 1r0k_A 84 DALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTV-AL-ANK--ESLVSAGGLMIDAVREHGTTLL 147 (388)
T ss_dssp HHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEE-EE-CCS--HHHHTTHHHHHHHHHHHTCEEE
T ss_pred cHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEE-EE-eCc--HHHHhhHHHHHHHHHHcCCEEE
Confidence 123444443 899999998888888889999999764 42 332 221 11333457899998884
No 241
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.61 E-value=0.024 Score=52.74 Aligned_cols=87 Identities=20% Similarity=0.280 Sum_probs=59.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~~ 105 (306)
..++|+|+|. |++|+...+.+..+|++++ ..|+....+ ...|+.. .+++++..+ .|++++++|.. .+..++.
T Consensus 145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~-~~l~e~l~~--aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 145 YGKKVGILGM-GAIGKAIARRLIPFGVKLY-YWSRHRKVNVEKELKARY-MDIDELLEK--SDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCHHHHHHHTEEE-CCHHHHHHH--CSEEEECCCCCTTTTTSBC
T ss_pred CcCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCcee-cCHHHHHhh--CCEEEEcCCCChHHHHHhC
Confidence 3578999999 9999999999999999975 677764211 1135543 478887766 89999999987 3333332
Q ss_pred ----HHHHcCCCEEEEecCCC
Q psy8894 106 ----EALDAEMPLIVCITEGI 122 (306)
Q Consensus 106 ----e~~~~Gi~~vvi~t~Gf 122 (306)
...+.| .+++.+.|.
T Consensus 220 ~~~~~~mk~g--ilin~srg~ 238 (333)
T 2d0i_A 220 EERVKKLEGK--YLVNIGRGA 238 (333)
T ss_dssp HHHHHHTBTC--EEEECSCGG
T ss_pred HHHHhhCCCC--EEEECCCCc
Confidence 223344 555555553
No 242
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.57 E-value=0.032 Score=52.30 Aligned_cols=86 Identities=12% Similarity=0.044 Sum_probs=62.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCC-------------CCCCc----------e--ecC--eeccC--C
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSP-------------GKGGK----------T--HLD--LPVFN--T 78 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP-------------~~~g~----------~--i~G--ip~y~--s 78 (306)
.+|+|+|+ |+.|+...+.+.++ ++++++.-++ +..|. . +.| ++++. +
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 58999999 99999999988776 4788754333 11111 1 123 34443 5
Q ss_pred HHhhhhc-CCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 79 VKEARDA-TGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 79 l~el~~~-~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.++++-. .++|+++.|+|.....+.+...++.|++.+++
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVI 121 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEE
Confidence 6677621 25999999999999999999999999998875
No 243
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.56 E-value=0.0044 Score=57.57 Aligned_cols=93 Identities=12% Similarity=0.020 Sum_probs=61.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee-------------cC--------------eeccCCHHh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH-------------LD--------------LPVFNTVKE 81 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i-------------~G--------------ip~y~sl~e 81 (306)
.++|+|||+ |.||......+.+.|++++ ..|++...- .. .| +....++++
T Consensus 6 ~~kI~vIGa-G~MG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGS-GLVGRSWAMLFASGGFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CceEEEEee-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 478999999 9999998899999999965 566653100 00 12 455677887
Q ss_pred hhhcCCCcEEEEecCchh--HHHHHHHHHHc-CCCEEEE-ecCCCChhH
Q psy8894 82 ARDATGAEATVIYVPPPG--AAKAIHEALDA-EMPLIVC-ITEGIPQLD 126 (306)
Q Consensus 82 l~~~~~iDlavi~vp~~~--~~~~~~e~~~~-Gi~~vvi-~t~Gf~e~~ 126 (306)
+.+. .|+++.++|... -.++++++.+. .-..+++ .|++++..+
T Consensus 84 av~~--aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~ 130 (319)
T 2dpo_A 84 AVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK 130 (319)
T ss_dssp HTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH
T ss_pred HHhc--CCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHH
Confidence 7665 899999999743 34566665543 2233442 567776543
No 244
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.53 E-value=0.034 Score=49.69 Aligned_cols=186 Identities=17% Similarity=0.044 Sum_probs=98.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEee-CCCCCC-c--eecCeeccC-------CHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGV-SPGKGG-K--THLDLPVFN-------TVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~V-nP~~~g-~--~i~Gip~y~-------sl~el~~~~~iDlavi~vp~ 97 (306)
.++|.|.|++|..|+...+.|.+.| +++++.. +|.... . ...|+.++. ++.++.+ ++|.++.+.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN--GAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh--cCCEEEEeCCC
Confidence 4789999999999999999999888 8877544 232100 0 012333221 2444444 49999987653
Q ss_pred h----------hHHHHHHHHHHcCCCEEEEecCCC----Ch----hH---HHHHHHHHHHhcCC--eEEccCCCceecCc
Q psy8894 98 P----------GAAKAIHEALDAEMPLIVCITEGI----PQ----LD---MVKVKHRLIRQSKS--RLIGPNCPGIIAPE 154 (306)
Q Consensus 98 ~----------~~~~~~~e~~~~Gi~~vvi~t~Gf----~e----~~---~~~~~~~~ar~~gi--~iiGPNc~Gi~~~~ 154 (306)
. ....+++.|.+.|++.++..++.- ++ .. .....+++.++.|+ .++=|.. ++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~--~~~~~ 160 (299)
T 2wm3_A 83 WESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPC--YFENL 160 (299)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCE--EGGGG
T ss_pred CccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecH--Hhhhc
Confidence 1 345677888888999888644321 01 00 11122235566676 4444432 22111
Q ss_pred cc-ccc-CC-CC------CCCCCCCEEEEecChhhHHHHHHHHHhC--CCceEEEEecCCCCCCCCCHHHHHHHhhcCCC
Q psy8894 155 QC-KIG-IM-PG------HIHQRGCVGVVSRSGTLTYEAVHQTTQV--GLGQTLCVGIGGDPFNGTNFIDCLEVFLKDPE 223 (306)
Q Consensus 155 ~~-~~~-~~-~~------~~~~~G~va~vSqSG~~~~~~~~~~~~~--g~g~s~~vs~Gn~~~~dv~~~d~l~~l~~D~~ 223 (306)
.. ... .. .. .....+.+.+++.. -++..+...+... -.|-.+.+ +++ . +++.|+.+.+.+--.
T Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~~~~~g~~~~~--~g~--~-~s~~e~~~~~~~~~g 234 (299)
T 2wm3_A 161 LSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVS-DLGPVVLSLLKMPEKYVGQNIGL--STC--R-HTAEEYAALLTKHTR 234 (299)
T ss_dssp GTTTCCEECTTSSSEEECCCCTTSCEEEECGG-GHHHHHHHHHHSHHHHTTCEEEC--CSE--E-ECHHHHHHHHHHHHS
T ss_pred hhhcCCcccCCCCEEEEEecCCCCccceecHH-HHHHHHHHHHcChhhhCCeEEEe--eec--c-CCHHHHHHHHHHHHC
Confidence 00 000 00 00 00123456777655 4555554444321 13433433 335 3 899999998876433
Q ss_pred cc
Q psy8894 224 TK 225 (306)
Q Consensus 224 t~ 225 (306)
.+
T Consensus 235 ~~ 236 (299)
T 2wm3_A 235 KV 236 (299)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 245
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=95.48 E-value=0.015 Score=53.64 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=50.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
+.++|+|+|. |++|+...+.++.+|++++ .+||..... ...|+.. .+++++... .|++++++|...
T Consensus 141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~-~~l~ell~~--aDvV~l~~p~~~ 208 (307)
T 1wwk_A 141 EGKTIGIIGF-GRIGYQVAKIANALGMNIL-LYDPYPNEERAKEVNGKF-VDLETLLKE--SDVVTIHVPLVE 208 (307)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCEE-CCHHHHHHH--CSEEEECCCCST
T ss_pred CCceEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCCChhhHhhcCccc-cCHHHHHhh--CCEEEEecCCCh
Confidence 3578999999 9999999999999999976 677764211 1235543 378888876 999999999643
No 246
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.47 E-value=0.014 Score=54.72 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~ 97 (306)
-++|+|+|. |++|+...+.++.+|++++ ..||... .+..+.-.|.+++++..+ .|++++++|.
T Consensus 148 gktvgIiGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~~--aDvV~l~~Pl 210 (343)
T 2yq5_A 148 NLTVGLIGV-GHIGSAVAEIFSAMGAKVI-AYDVAYN-PEFEPFLTYTDFDTVLKE--ADIVSLHTPL 210 (343)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-GGGTTTCEECCHHHHHHH--CSEEEECCCC
T ss_pred CCeEEEEec-CHHHHHHHHHHhhCCCEEE-EECCChh-hhhhccccccCHHHHHhc--CCEEEEcCCC
Confidence 578999999 9999999999999999976 6777642 222222345589999887 9999999995
No 247
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.46 E-value=0.014 Score=55.08 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCe-EEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTK-VVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~-vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..++|+|+|. |++|+...+.++.+|++ ++ ..|+.....+ ..|+..+.+++++..+ .|++++++|..
T Consensus 163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~~--aDvV~l~~P~t 232 (364)
T 2j6i_A 163 EGKTIATIGA-GRIGYRVLERLVPFNPKELL-YYDYQALPKDAEEKVGARRVENIEELVAQ--ADIVTVNAPLH 232 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCSEEE-EECSSCCCHHHHHHTTEEECSSHHHHHHT--CSEEEECCCCS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCcEEE-EECCCccchhHHHhcCcEecCCHHHHHhc--CCEEEECCCCC
Confidence 3578999999 99999999999999997 76 6776531111 2466656789999876 99999999985
No 248
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.46 E-value=0.035 Score=48.93 Aligned_cols=86 Identities=20% Similarity=0.312 Sum_probs=56.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHc--CCeEEEee-CCCCCCcee--cCeecc-------CCHHhhhhcCCCcEEEEecCc--
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEY--GTKVVGGV-SPGKGGKTH--LDLPVF-------NTVKEARDATGAEATVIYVPP-- 97 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~--g~~vv~~V-nP~~~g~~i--~Gip~y-------~sl~el~~~~~iDlavi~vp~-- 97 (306)
+|.|.|++|..|+...+.|.+. |+++++.. +|.. ..+. .++.++ .++.++.+ ++|+++-+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~ 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK-AQALAAQGITVRQADYGDEAALTSALQ--GVEKLLLISSSEV 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-CHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECC----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh-hhhhhcCCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc
Confidence 4899999999999999999887 89877543 2221 1111 123222 12444444 48999877543
Q ss_pred ----hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ----PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ----~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 78 ~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 78 GQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ----CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 35677888888899998887665
No 249
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.45 E-value=0.042 Score=46.39 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=54.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee-cCeecc-CCHHh----hhhcCCCcEEEEecCc------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH-LDLPVF-NTVKE----ARDATGAEATVIYVPP------ 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i-~Gip~y-~sl~e----l~~~~~iDlavi~vp~------ 97 (306)
++|.|.|++|..|+...+.|.+.|++++... .+... .+. .++..+ -++.+ ... ++|++|.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIV-RNAGKITQTHKDINILQKDIFDLTLSDLS--DQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SCSHHHHHHCSSSEEEECCGGGCCHHHHT--TCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEE-cCchhhhhccCCCeEEeccccChhhhhhc--CCCEEEECCcCCccccc
Confidence 4799999999999999999999999977443 22100 000 222222 23332 222 48988877644
Q ss_pred ---hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ---PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ---~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++++++
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEec
Confidence 23456667777777777776664
No 250
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.45 E-value=0.013 Score=54.70 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee-cCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH-LDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i-~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|+|+|. |++|+...+.++.+|++++ ..||... ... .+.....+++++... .|++++++|..
T Consensus 146 g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~~l~ell~~--aDvV~l~~p~~ 210 (333)
T 1j4a_A 146 DQVVGVVGT-GHIGQVFMQIMEGFGAKVI-TYDIFRN-PELEKKGYYVDSLDDLYKQ--ADVISLHVPDV 210 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-HHHHHTTCBCSCHHHHHHH--CSEEEECSCCC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhHHhhCeecCCHHHHHhh--CCEEEEcCCCc
Confidence 578999999 9999999999999999976 6777641 111 122323378888876 99999999954
No 251
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=95.44 E-value=0.028 Score=52.47 Aligned_cols=88 Identities=13% Similarity=0.201 Sum_probs=60.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHHH-
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKAI- 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~~- 104 (306)
..++|+|+|. |++|+...+.++.+|++++ ..||..... ...|+. +.+++++..+ .|++++++|... +..++
T Consensus 164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~~--aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 164 NGKTLGILGL-GRIGREVATRMQSFGMKTI-GYDPIISPEVSASFGVQ-QLPLEEIWPL--CDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSSCHHHHHHTTCE-ECCHHHHGGG--CSEEEECCCCCTTTTTSBC
T ss_pred CcCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCce-eCCHHHHHhc--CCEEEEecCCCHHHHHhhC
Confidence 3578999999 9999999999999999976 678764211 123554 3589998876 999999999864 44444
Q ss_pred HHHHH-cCCCEEEE-ecCC
Q psy8894 105 HEALD-AEMPLIVC-ITEG 121 (306)
Q Consensus 105 ~e~~~-~Gi~~vvi-~t~G 121 (306)
++..+ ..-..+++ .+.|
T Consensus 239 ~~~l~~mk~gailIN~arg 257 (335)
T 2g76_A 239 DNTFAQCKKGVRVVNCARG 257 (335)
T ss_dssp HHHHTTSCTTEEEEECSCT
T ss_pred HHHHhhCCCCcEEEECCCc
Confidence 23333 34444443 4444
No 252
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.43 E-value=0.12 Score=50.69 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CC-eEEEeeCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GT-KVVGGVSPG 64 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~-~vv~~VnP~ 64 (306)
.++|+|+|+ |.+|......|.+. |+ +++ .+|.+
T Consensus 18 ~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~-~~D~~ 52 (478)
T 3g79_A 18 IKKIGVLGM-GYVGIPAAVLFADAPCFEKVL-GFQRN 52 (478)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHSTTCCEEE-EECCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCCeEE-EEECC
Confidence 568999999 99999998999999 99 876 44443
No 253
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.43 E-value=0.028 Score=52.29 Aligned_cols=65 Identities=17% Similarity=0.288 Sum_probs=50.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--ecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--HLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
.++|+|+|+ |++|+...+.+..+|++++ .+|+....+. ..|+. +.+++++... .|++++++|...
T Consensus 150 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~~~l~~--aDvVil~vp~~~ 216 (334)
T 2dbq_A 150 GKTIGIIGL-GRIGQAIAKRAKGFNMRIL-YYSRTRKEEVERELNAE-FKPLEDLLRE--SDFVVLAVPLTR 216 (334)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHCCE-ECCHHHHHHH--CSEEEECCCCCT
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEE-EECCCcchhhHhhcCcc-cCCHHHHHhh--CCEEEECCCCCh
Confidence 478999999 9999999999999999975 6777642111 12544 3578887776 899999999865
No 254
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.39 E-value=0.031 Score=53.14 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=62.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCC-------------CCCCc----------e--ecC--eeccC--C
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSP-------------GKGGK----------T--HLD--LPVFN--T 78 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP-------------~~~g~----------~--i~G--ip~y~--s 78 (306)
.||+|+|+ |+.|+...+.+.++ ++++++.-++ +..|. . +.| ++++. +
T Consensus 3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 58999999 99999999988775 4788765443 11111 1 234 34443 5
Q ss_pred HHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 79 VKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 79 l~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.++++- +.++|+++.|++.....+.+...++.|++.|++
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVI 121 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEE
Confidence 667752 124999999999999999999999999998875
No 255
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.34 E-value=0.049 Score=48.63 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=58.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC-CCC----c-------eecCeeccC-------CHHhhhhcCCCcEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG-KGG----K-------THLDLPVFN-------TVKEARDATGAEAT 91 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~-~~g----~-------~i~Gip~y~-------sl~el~~~~~iDla 91 (306)
++|+|+|++|..|+.+.+.|.+.|+++++.+-.. ... . ...|+.++. ++.++.+ ++|++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~v 80 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIV 80 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEE
Confidence 5799999999999999999999999876554322 000 0 012333221 2444444 49999
Q ss_pred EEecCc---hhHHHHHHHHHHcC-CCEEEEec
Q psy8894 92 VIYVPP---PGAAKAIHEALDAE-MPLIVCIT 119 (306)
Q Consensus 92 vi~vp~---~~~~~~~~e~~~~G-i~~vvi~t 119 (306)
|.+.+. .....+++.|.+.| ++.++ ++
T Consensus 81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S 111 (307)
T 2gas_A 81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFF-PS 111 (307)
T ss_dssp EECSSSSCGGGHHHHHHHHHHHCCCSEEE-CS
T ss_pred EECCcccccccHHHHHHHHHhcCCceEEe-ec
Confidence 988764 45677888888888 99876 44
No 256
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=95.33 E-value=0.016 Score=54.10 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=57.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH--H
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI--H 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~--~ 105 (306)
-++|+|+|. |++|+...+.++.+|++++ ..||...... -.|+. |.+++++..+ .|++++++|.. .+..++ +
T Consensus 141 g~tvgIiG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~g~~-~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~ 215 (334)
T 2pi1_A 141 RLTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKREDLKEKGCV-YTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHTTCE-ECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred CceEEEECc-CHHHHHHHHHHHHCcCEEE-EECCCcchhhHhcCce-ecCHHHHHhh--CCEEEEeCCCChHHHHhhCHH
Confidence 578999999 9999999999999999976 6777641111 22544 4459999876 99999999953 333333 2
Q ss_pred HHHHcCCCEEEE
Q psy8894 106 EALDAEMPLIVC 117 (306)
Q Consensus 106 e~~~~Gi~~vvi 117 (306)
......-..+++
T Consensus 216 ~l~~mk~gailI 227 (334)
T 2pi1_A 216 RISLMKDGVYLI 227 (334)
T ss_dssp HHHHSCTTEEEE
T ss_pred HHhhCCCCcEEE
Confidence 333345455443
No 257
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.33 E-value=0.05 Score=49.04 Aligned_cols=85 Identities=13% Similarity=0.196 Sum_probs=58.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC-CCC--c--------eecCeecc-------CCHHhhhhcCCCcEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG-KGG--K--------THLDLPVF-------NTVKEARDATGAEAT 91 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~-~~g--~--------~i~Gip~y-------~sl~el~~~~~iDla 91 (306)
.++|+|+|++|..|+.+.+.|.+.|++++...... ... . .-.++.++ .++.++.+ ++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEE
Confidence 35799999999999999999999999976543322 100 0 01233322 12444444 49999
Q ss_pred EEecCc---hhHHHHHHHHHHcC-CCEEE
Q psy8894 92 VIYVPP---PGAAKAIHEALDAE-MPLIV 116 (306)
Q Consensus 92 vi~vp~---~~~~~~~~e~~~~G-i~~vv 116 (306)
+.+... .....+++.|.+.| ++.++
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 82 ISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred EECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 988764 45678889999999 99876
No 258
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.33 E-value=0.077 Score=45.62 Aligned_cols=89 Identities=15% Similarity=0.054 Sum_probs=57.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC--eEEEee-CCCCCCc-eecCeecc-------CCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGV-SPGKGGK-THLDLPVF-------NTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~V-nP~~~g~-~i~Gip~y-------~sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|.|.|++|..|+...+.|.+.|+ +++... ++..... ...++..+ .++.++.+ ++|++|-+....
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc--CCCEEEECCCcc
Confidence 47899999999999999999999999 876432 2321100 01122211 23334443 499999876532
Q ss_pred ---------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ---------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ---------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.+.+.+++.++.+++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 3455677788889988887776
No 259
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.32 E-value=0.026 Score=52.76 Aligned_cols=86 Identities=17% Similarity=0.147 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCC-------------CCCCc----------e--ecC--eeccC--CHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSP-------------GKGGK----------T--HLD--LPVFN--TVK 80 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP-------------~~~g~----------~--i~G--ip~y~--sl~ 80 (306)
.+|+|+|+ |+.|+...+.+.++ .+++++.-+. ...|. . +.| ++++. +.+
T Consensus 2 ikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 2 VKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp EEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 47999999 99999999988876 7888755443 11111 0 123 34552 456
Q ss_pred hhh-hcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 81 EAR-DATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 81 el~-~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
+++ .+.++|+++.++|.....+.+...++.|+|.++|
T Consensus 81 ~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI 118 (334)
T 3cmc_O 81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118 (334)
T ss_dssp GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence 664 2125999999999999999999999999998775
No 260
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.32 E-value=0.045 Score=49.57 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=56.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceec--CeeccC-------CHHhhhhcCCCcEEEEecCch---
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHL--DLPVFN-------TVKEARDATGAEATVIYVPPP--- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~--Gip~y~-------sl~el~~~~~iDlavi~vp~~--- 98 (306)
++|.|.|++|..|+...+.|.+.|+++++........+.+. ++..+. ++.++.+ ++|++|-+....
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPSR 91 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc--CCCEEEECCccCcCC
Confidence 48999999999999999999999999875433221111111 332221 2344444 499998765421
Q ss_pred -------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 -------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 -------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 2356778888889887776665
No 261
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.30 E-value=0.14 Score=43.92 Aligned_cols=88 Identities=22% Similarity=0.209 Sum_probs=57.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCC-----cee----cCeeccCCHHhhhhcCCCcEEEEecCc-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGG-----KTH----LDLPVFNTVKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g-----~~i----~Gip~y~sl~el~~~~~iDlavi~vp~- 97 (306)
.++|.|.|++|..|+...+.|.+. |++++.. +.+... ..+ .++.-..++.++.+. +|++|-+...
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~ 80 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL-VRSAQGKEKIGGEADVFIGDITDADSINPAFQG--IDALVILTSAV 80 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE-ESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTT--CSEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE-EcCCCchhhcCCCeeEEEecCCCHHHHHHHHcC--CCEEEEecccc
Confidence 478999999999999999999998 8887744 322100 000 111112235555544 9999876431
Q ss_pred ------------------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ------------------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ------------------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.+++.++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 12466788888889988887665
No 262
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.29 E-value=0.027 Score=52.65 Aligned_cols=86 Identities=16% Similarity=0.146 Sum_probs=61.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCC-------------CCCCc----------e--ecC--eeccC--C
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSP-------------GKGGK----------T--HLD--LPVFN--T 78 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP-------------~~~g~----------~--i~G--ip~y~--s 78 (306)
.+|+|+|+ |+.|+...+.+.++ ++++++.-+. +..|. . +.| ++++. +
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 37999999 99999999987765 5888755332 11111 1 123 44552 5
Q ss_pred HHhhh-hcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 79 VKEAR-DATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 79 l~el~-~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.++++ .+.++|+++.++|.....+.+...++.|+|.+||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVI 119 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEE
Confidence 66664 2124999999999999999999999999998775
No 263
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.24 E-value=0.0069 Score=55.66 Aligned_cols=92 Identities=15% Similarity=0.053 Sum_probs=59.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce----------ecCeeccCCHHhhhhcCCCcEEEEecCc
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT----------HLDLPVFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~----------i~Gip~y~sl~el~~~~~iDlavi~vp~ 97 (306)
...++|+|+|+ |.||.-...++. .|++++ ..|++...-+ ..++....+++++ .. .|++|.++|.
T Consensus 10 ~~~~~V~vIG~-G~MG~~iA~~la-aG~~V~-v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~--aDlVieavpe 83 (293)
T 1zej_A 10 HHHMKVFVIGA-GLMGRGIAIAIA-SKHEVV-LQDVSEKALEAAREQIPEELLSKIEFTTTLEKV-KD--CDIVMEAVFE 83 (293)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCHHHHHHHHHHSCGGGGGGEEEESSCTTG-GG--CSEEEECCCS
T ss_pred cCCCeEEEEee-CHHHHHHHHHHH-cCCEEE-EEECCHHHHHHHHHHHHHHHhCCeEEeCCHHHH-cC--CCEEEEcCcC
Confidence 45689999999 999998888899 999975 6776531000 0156666778774 33 8999999998
Q ss_pred hhH--HHHHHHHHHcCCCEEEE-ecCCCChhH
Q psy8894 98 PGA--AKAIHEALDAEMPLIVC-ITEGIPQLD 126 (306)
Q Consensus 98 ~~~--~~~~~e~~~~Gi~~vvi-~t~Gf~e~~ 126 (306)
... ..++.++... -..++. -|+.++.++
T Consensus 84 ~~~vk~~l~~~l~~~-~~~IlasntSti~~~~ 114 (293)
T 1zej_A 84 DLNTKVEVLREVERL-TNAPLCSNTSVISVDD 114 (293)
T ss_dssp CHHHHHHHHHHHHTT-CCSCEEECCSSSCHHH
T ss_pred CHHHHHHHHHHHhcC-CCCEEEEECCCcCHHH
Confidence 775 3344555444 333442 245665543
No 264
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.22 E-value=0.028 Score=52.60 Aligned_cols=91 Identities=15% Similarity=-0.022 Sum_probs=63.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCC-------------CCCC-----------ce--ecCe--eccC--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSP-------------GKGG-----------KT--HLDL--PVFN-- 77 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP-------------~~~g-----------~~--i~Gi--p~y~-- 77 (306)
.+|+|+|+ |+.|+...+.+.++ .+++++.-+. +..| +. +.|. +++.
T Consensus 2 ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 2 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 47999999 99999999988876 4567643321 1111 11 3332 2332
Q ss_pred CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCC
Q psy8894 78 TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIP 123 (306)
Q Consensus 78 sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~ 123 (306)
+.++++- +.++|+++.++|.....+.+...++.|++.|++ |.-+.
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~i-Sap~r 126 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI-TAPGK 126 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE-SSCCB
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEE-CCccc
Confidence 4555531 124999999999999999999999999998775 65554
No 265
>2g6t_A Uncharacterized protein, homolog HI1244 from haemophilus influenzae; hypothetical protein, structural genomics, PSI; 3.00A {Clostridium acetobutylicum} SCOP: c.147.1.1
Probab=95.19 E-value=0.057 Score=49.18 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=82.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc----CCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY----GTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~----g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
.+++|+|+ |..|+..+..++.. .+++++..++..-++.+.|.|++. .+|+... +.|-++++..- .-.++=.+
T Consensus 2 ~~~~I~g~-~~~~~~a~n~~~~~~~~~~~~i~~~~~~dk~a~~idg~~v~s-~~~i~~~-e~DyiiIa~~~-~~~qi~~~ 77 (306)
T 2g6t_A 2 YKCLIWGV-NDEYTLAYDKLLFEISKGNLSIEALISKDKYAKYIDGKEVID-KTEISNY-EFDYIIIFNKE-RYSDIKNE 77 (306)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHTTSEEEEEEECSSCSCSBSSSCBEEC-GGGGGGS-CCSEEEECCTT-THHHHHHH
T ss_pred ceEEEEec-cHHHHHHHHHHHHHhhcccceEEEEecchhhhhhhCCeeccC-HHHHhcC-CCCEEEEeccc-cHHHHHHH
Confidence 47999999 77777776655443 477888888876678899999998 5666543 59999999865 56777778
Q ss_pred HHHcCCCEEEEecCCC---ChhHHHHHHHHHHHhcCCeEEccCCCceecC
Q psy8894 107 ALDAEMPLIVCITEGI---PQLDMVKVKHRLIRQSKSRLIGPNCPGIIAP 153 (306)
Q Consensus 107 ~~~~Gi~~vvi~t~Gf---~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~ 153 (306)
+++.||+.==+++..+ +..+.++.. .-+..++.|+..||.|-.-.
T Consensus 78 l~~~gi~~~ki~~~~~~~i~~~~~~r~~--rL~N~~~TIISnNC~Gg~iy 125 (306)
T 2g6t_A 78 ALELGIPERKILNGKFFFISNFDFKRYC--KLIENPITIISDDCWGGLVS 125 (306)
T ss_dssp HHHTTCCGGGEECSGGGGSTTCCHHHHH--HHHHTTCEEEESSSHHHHHH
T ss_pred HHHcCCchhheeeeEEEecccccHHHHH--HhcCCCcEEEecCchhHHHH
Confidence 8899987544444422 222333322 24788999999999875543
No 266
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.18 E-value=0.023 Score=52.73 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=48.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|+|+|+ |++|+...+.+...|++++ .+|++....+ ..|+... +++++... .|++++++|..
T Consensus 155 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~-~l~e~l~~--aDvVi~~vp~~ 221 (330)
T 2gcg_A 155 QSTVGIIGL-GRIGQAIARRLKPFGVQRF-LYTGRQPRPEEAAEFQAEFV-STPELAAQ--SDFIVVACSLT 221 (330)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGTCCEE-EEESSSCCHHHHHTTTCEEC-CHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcchhHHHhcCceeC-CHHHHHhh--CCEEEEeCCCC
Confidence 568999999 9999999999999999975 5665431111 1244433 78888766 89999999975
No 267
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.16 E-value=0.0092 Score=56.87 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=49.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
.++|+|+|. |++|+...+.++.+|++++ ..||.. ....+...+.+++++..+ .|++++++|..
T Consensus 119 gktvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~--~~~~~~~~~~sl~ell~~--aDiV~l~~Plt 181 (381)
T 3oet_A 119 DRTIGIVGV-GNVGSRLQTRLEALGIRTL-LCDPPR--AARGDEGDFRTLDELVQE--ADVLTFHTPLY 181 (381)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHH--HHTTCCSCBCCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCh--HHhccCcccCCHHHHHhh--CCEEEEcCcCC
Confidence 578999999 9999999999999999976 667743 111122357789999887 99999999844
No 268
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.15 E-value=0.042 Score=45.76 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-ce--ecCeecc-CC------HHhh-hhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-KT--HLDLPVF-NT------VKEA-RDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~~--i~Gip~y-~s------l~el-~~~~~iDlavi~vp~ 97 (306)
..+|+|+|+ |++|+...+.|.+. |++++ .++.+... +. ..|..++ .+ +.++ .- .+.|++++++|.
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~-vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~-~~ad~vi~~~~~ 115 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISL-GIEIREEAAQQHRSEGRNVISGDATDPDFWERILDT-GHVKLVLLAMPH 115 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEE-EEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSC-CCCCEEEECCSS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEE-EEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCC-CCCCEEEEeCCC
Confidence 357999998 99999999999998 99876 56554310 01 1244432 22 2332 11 248999999996
Q ss_pred hhH-HHHHHHHHHcC-CCEEEEecCCCChhHHHHHHHHHHHhcCC-eEEccCC
Q psy8894 98 PGA-AKAIHEALDAE-MPLIVCITEGIPQLDMVKVKHRLIRQSKS-RLIGPNC 147 (306)
Q Consensus 98 ~~~-~~~~~e~~~~G-i~~vvi~t~Gf~e~~~~~~~~~~ar~~gi-~iiGPNc 147 (306)
... ..++..+.+.+ ...++..+.+ .+. .+ ..++.|+ .++.|..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~~~~~--~~~-~~----~l~~~G~~~vi~p~~ 161 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAAIAEY--PDQ-LE----GLLESGVDAAFNIYS 161 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESS--HHH-HH----HHHHHTCSEEEEHHH
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEECC--HHH-HH----HHHHcCCCEEEchHH
Confidence 554 44455555666 4445543332 221 11 2345566 5666654
No 269
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.14 E-value=0.04 Score=53.88 Aligned_cols=83 Identities=11% Similarity=0.021 Sum_probs=59.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CC---eEEEeeCCCCCCcee---cCeecc-----CC-----HHhhhhcCCCcEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GT---KVVGGVSPGKGGKTH---LDLPVF-----NT-----VKEARDATGAEATV 92 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~---~vv~~VnP~~~g~~i---~Gip~y-----~s-----l~el~~~~~iDlav 92 (306)
..+|.|+|+ |.+|+.+.+.+.+. ++ +++ .++|...+.++ .|++.. .+ ++++..+ .|++|
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~--~DvVI 88 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEE--NDFLI 88 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCT--TCEEE
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEE-EeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcC--CCEEE
Confidence 467999998 99999998877664 66 343 67776533321 243322 22 3334443 59999
Q ss_pred EecCchhHHHHHHHHHHcCCCEEE
Q psy8894 93 IYVPPPGAAKAIHEALDAEMPLIV 116 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~~Gi~~vv 116 (306)
-..++.....+++.|++.|+..+=
T Consensus 89 N~s~~~~~l~Im~acleaGv~YlD 112 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGALYIN 112 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCEEEE
T ss_pred ECCccccCHHHHHHHHHcCCCEEE
Confidence 999999999999999999999743
No 270
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.10 E-value=0.06 Score=52.46 Aligned_cols=106 Identities=8% Similarity=0.067 Sum_probs=68.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC-cee---cCeec----c---CCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG-KTH---LDLPV----F---NTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g-~~i---~Gip~----y---~sl~el~~~~~iDlavi~vp~ 97 (306)
.++|+|+|+ |..|+.+.+.|.+. ++++ ..++++... +++ .++.. + .++.++... +|++|.++|.
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V-~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~--~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINV-TVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLAD--NDVVISLIPY 98 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEE-EEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHT--SSEEEECSCG
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeE-EEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcC--CCEEEECCch
Confidence 468999998 99999999999887 7774 366654210 111 23321 1 134444444 9999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.....+.+.|++.|+..+- .+ -+.+ +..++. +.|++.|+.++
T Consensus 99 ~~~~~v~~a~l~~g~~vvd-~~-~~~p-~~~~Ll-~~Ak~aGv~~i 140 (467)
T 2axq_A 99 TFHPNVVKSAIRTKTDVVT-SS-YISP-ALRELE-PEIVKAGITVM 140 (467)
T ss_dssp GGHHHHHHHHHHHTCEEEE-CS-CCCH-HHHHHH-HHHHHHTCEEE
T ss_pred hhhHHHHHHHHhcCCEEEE-ee-cCCH-HHHHHH-HHHHHcCCEEE
Confidence 8777888999999887543 22 2232 223333 35777787655
No 271
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.08 E-value=0.022 Score=52.09 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=59.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCeeccC----------CHHhhhhcCCCcEEEEecCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDLPVFN----------TVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gip~y~----------sl~el~~~~~iDlavi~vp~ 97 (306)
++|+|+|+ |.+|......|. .|.++. .++++... +.+ .|+.+.. .-++... +.|+++++|++
T Consensus 3 mkI~IiGa-Ga~G~~~a~~L~-~g~~V~-~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~--~~D~vilavK~ 77 (307)
T 3ego_A 3 LKIGIIGG-GSVGLLCAYYLS-LYHDVT-VVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINS--DFDLLVVTVKQ 77 (307)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCS--CCSEEEECCCG
T ss_pred CEEEEECC-CHHHHHHHHHHh-cCCceE-EEECCHHHHHHHHhCCceEecCCCeecccccccccccC--CCCEEEEEeCH
Confidence 68999999 999998888888 888765 56654200 111 2333221 0012222 48999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEecCCCCh
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITEGIPQ 124 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~Gf~e 124 (306)
....++++++...+-+.|+.++.|+..
T Consensus 78 ~~~~~~l~~l~~~~~~~ivs~~nGi~~ 104 (307)
T 3ego_A 78 HQLQSVFSSLERIGKTNILFLQNGMGH 104 (307)
T ss_dssp GGHHHHHHHTTSSCCCEEEECCSSSHH
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCccH
Confidence 999999988765444446778889854
No 272
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.01 E-value=0.012 Score=52.53 Aligned_cols=101 Identities=14% Similarity=-0.003 Sum_probs=63.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCeeccCCHHhhhhcCCCcEEEEecCchhHH---HHH
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---HLDLPVFNTVKEARDATGAEATVIYVPPPGAA---KAI 104 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~---~~~ 104 (306)
+|+|+|+ |.+|+...+.+.+.|+++ ...|++... ++ ..|.. +.+++++ .+ .|+++.++|+...+ ..+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g~~v-~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~--~Divi~~tp~~~~~~~~~~l 191 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAGLEV-WVWNRTPQRALALAEEFGLR-AVPLEKA-RE--ARLLVNATRVGLEDPSASPL 191 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCE-EEECSSHHHHHHHHHHHTCE-ECCGGGG-GG--CSEEEECSSTTTTCTTCCSS
T ss_pred eEEEECC-cHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHHHhccc-hhhHhhc-cC--CCEEEEccCCCCCCCCCCCC
Confidence 8999999 999999999999999864 477876311 11 12444 6778888 65 99999999988543 222
Q ss_pred -HHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 105 -HEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 105 -~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.++++.|. .++-++.+..+. ++. +.+++.|.+++
T Consensus 192 ~~~~l~~g~-~viD~~~~p~~t---~l~-~~a~~~g~~~v 226 (263)
T 2d5c_A 192 PAELFPEEG-AAVDLVYRPLWT---RFL-REAKAKGLKVQ 226 (263)
T ss_dssp CGGGSCSSS-EEEESCCSSSSC---HHH-HHHHHTTCEEE
T ss_pred CHHHcCCCC-EEEEeecCCccc---HHH-HHHHHCcCEEE
Confidence 23333343 233333332222 233 35678888877
No 273
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.00 E-value=0.022 Score=56.32 Aligned_cols=72 Identities=18% Similarity=0.323 Sum_probs=55.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~~e 106 (306)
.++|+|+|. |++|+...+.++.+|++++ ..||..... ...|+... +++++..+ .|++++++|.. .+..++.+
T Consensus 142 g~~vgIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-~l~e~~~~--aDvV~l~~P~~~~t~~~i~~ 216 (529)
T 1ygy_A 142 GKTVGVVGL-GRIGQLVAQRIAAFGAYVV-AYDPYVSPARAAQLGIELL-SLDDLLAR--ADFISVHLPKTPETAGLIDK 216 (529)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCHHHHHHHTCEEC-CHHHHHHH--CSEEEECCCCSTTTTTCBCH
T ss_pred CCEEEEEee-CHHHHHHHHHHHhCCCEEE-EECCCCChhHHHhcCcEEc-CHHHHHhc--CCEEEECCCCchHHHHHhCH
Confidence 578999999 9999999999999999976 678764111 12365544 78888876 99999999987 66666654
No 274
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=94.97 E-value=0.033 Score=51.81 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=49.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ceecCeeccCCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTHLDLPVFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i~Gip~y~sl~el~~~~~iDlavi~vp~ 97 (306)
-++|+|+|. |++|+...+.++.+|++++ ..|+.... ....+...+.+++++..+ .|++++++|.
T Consensus 140 g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~~--aDvV~l~lPl 204 (324)
T 3hg7_A 140 GRTLLILGT-GSIGQHIAHTGKHFGMKVL-GVSRSGRERAGFDQVYQLPALNKMLAQ--ADVIVSVLPA 204 (324)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCCCTTCSEEECGGGHHHHHHT--CSEEEECCCC
T ss_pred cceEEEEEE-CHHHHHHHHHHHhCCCEEE-EEcCChHHhhhhhcccccCCHHHHHhh--CCEEEEeCCC
Confidence 578999999 9999999999999999976 56665311 112223345689999876 9999999995
No 275
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.96 E-value=0.081 Score=42.77 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC--ce-----ecCeecc-CC------HHhhhhcCCCcEEEEec
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG--KT-----HLDLPVF-NT------VKEARDATGAEATVIYV 95 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g--~~-----i~Gip~y-~s------l~el~~~~~iDlavi~v 95 (306)
.++|+|+|+ |+.|+...+.|.+.|++++ .++++... +. -.|++++ .+ +.++.- .+.|++++++
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVT-VISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALS 79 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcCh-hhCCEEEEec
Confidence 467999998 9999999999999999876 56554100 01 1234333 12 333211 2489999999
Q ss_pred CchhHHHHH-HHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCC-eEEccCC
Q psy8894 96 PPPGAAKAI-HEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKS-RLIGPNC 147 (306)
Q Consensus 96 p~~~~~~~~-~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi-~iiGPNc 147 (306)
+.+.....+ ..+.+. +...++....+.. . .+ ..++.|. .++.|.-
T Consensus 80 ~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~--~-~~----~l~~~G~~~vi~p~~ 127 (153)
T 1id1_A 80 DNDADNAFVVLSAKDMSSDVKTVLAVSDSK--N-LN----KIKMVHPDIILSPQL 127 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEECSSGG--G-HH----HHHTTCCSEEECHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECCHH--H-HH----HHHHcCCCEEEcHHH
Confidence 876655444 334444 5555665444321 1 11 2255676 5666643
No 276
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.94 E-value=0.011 Score=53.78 Aligned_cols=93 Identities=16% Similarity=0.042 Sum_probs=60.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee---cCe---eccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH---LDL---PVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i---~Gi---p~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
++|+|+|+ |.+|......|.+.|.++. .++++..+-+. .|. ++..+..+... .+.|+++++||+....+++
T Consensus 3 mkI~iiGa-Ga~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~D~vilavk~~~~~~~l 79 (294)
T 3g17_A 3 LSVAIIGP-GAVGTTIAYELQQSLPHTT-LIGRHAKTITYYTVPHAPAQDIVVKGYEDVT-NTFDVIIIAVKTHQLDAVI 79 (294)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHCTTCE-EEESSCEEEEEESSTTSCCEEEEEEEGGGCC-SCEEEEEECSCGGGHHHHG
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEE-EEEeccCcEEEEecCCeeccceecCchHhcC-CCCCEEEEeCCccCHHHHH
Confidence 57999999 9999988888888888754 45544311111 231 22222223221 2489999999999999999
Q ss_pred HHHHHc-CC-CEEEEecCCCChhH
Q psy8894 105 HEALDA-EM-PLIVCITEGIPQLD 126 (306)
Q Consensus 105 ~e~~~~-Gi-~~vvi~t~Gf~e~~ 126 (306)
+++... +- ..|+.++.|+..++
T Consensus 80 ~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 80 PHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GGHHHHEEEEEEEEECCSSCCCGG
T ss_pred HHHHHhhCCCCEEEEeccCcccHh
Confidence 887653 22 24566788986543
No 277
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.92 E-value=0.052 Score=47.95 Aligned_cols=88 Identities=17% Similarity=0.200 Sum_probs=57.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCCcee--cCeecc-------CCHHhhhhcCCCcEEEEecCc--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGGKTH--LDLPVF-------NTVKEARDATGAEATVIYVPP-- 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~~i--~Gip~y-------~sl~el~~~~~iDlavi~vp~-- 97 (306)
++|.|.|++|..|+...+.|.+. |+++++.........+. .++.++ .++.++.+ ++|+++-+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~ 78 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPHY 78 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCCc
Confidence 46999999999999999999887 89877544321101111 133222 12444444 49999877643
Q ss_pred ------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 79 ~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 79 DNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 24566788888899988887665
No 278
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=94.92 E-value=0.051 Score=48.85 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=58.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch-----------
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP----------- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~----------- 98 (306)
.++|.|.|++|-.|+...+.|.+.|++++. +..+.. .++.-..++.++.+..++|++|-+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~-~~r~~~----~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~ 77 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRDE----LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPA 77 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEE-CCCTTT----CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEE-EecCcc----CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHH
Confidence 368999999999999999999999999764 333221 1111223455655522499998765321
Q ss_pred --------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 --------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 --------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
....+++.|.+.+++.++.+++
T Consensus 78 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 78 DFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 2345678888889988876665
No 279
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.91 E-value=0.017 Score=55.07 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=50.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
..++|+|||. |++|+...+.++.+|++++ ..||... ..-.|. .+.+++++..+ .|++++++|...
T Consensus 115 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~g~-~~~~l~ell~~--aDvV~l~~Plt~ 179 (380)
T 2o4c_A 115 AERTYGVVGA-GQVGGRLVEVLRGLGWKVL-VCDPPRQ-AREPDG-EFVSLERLLAE--ADVISLHTPLNR 179 (380)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHHH-HHSTTS-CCCCHHHHHHH--CSEEEECCCCCS
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEE-EEcCChh-hhccCc-ccCCHHHHHHh--CCEEEEeccCcc
Confidence 3578999999 9999999999999999976 5776431 111232 46789999876 999999998654
No 280
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.87 E-value=0.019 Score=51.69 Aligned_cols=68 Identities=18% Similarity=0.094 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c---eecCeeccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K---THLDLPVFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
+.++|+|+|+ |.+|+...+.|.+.|+++ ..+|++... + +..|+.++++++++..+ .|++|.++|+...
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V-~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~--aDiVi~atp~~~~ 199 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKV-FLWNRTKEKAIKLAQKFPLEVVNSPEEVIDK--VQVIVNTTSVGLK 199 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEE-EEECSSHHHHHHHTTTSCEEECSCGGGTGGG--CSEEEECSSTTSS
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEE-EEEECCHHHHHHHHHHcCCeeehhHHhhhcC--CCEEEEeCCCCCC
Confidence 3578999998 999999999999989854 477876310 1 12366677778777765 9999999998764
No 281
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.84 E-value=0.048 Score=50.84 Aligned_cols=90 Identities=16% Similarity=0.080 Sum_probs=63.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCC--------c--------e---------ecC--eeccC--CHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGG--------K--------T---------HLD--LPVFN--TVK 80 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g--------~--------~---------i~G--ip~y~--sl~ 80 (306)
.+|+|+|+ |+.|+...+.+.++ .+++++.-+....+ + + +.| ++++. +.+
T Consensus 2 ikVgI~G~-G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (330)
T 1gad_O 2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA 80 (330)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECc-CHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChh
Confidence 47999997 99999999988876 67887654331101 0 0 111 12343 356
Q ss_pred hhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCC
Q psy8894 81 EARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 81 el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf 122 (306)
+++- ..++|+++.++|.....+.+...++.|+|.|+ +|..|
T Consensus 81 ~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVd-lSa~~ 122 (330)
T 1gad_O 81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVV-MTGPS 122 (330)
T ss_dssp GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEE-ESSCC
T ss_pred hCccccccCCEEEECCCccccHHHHHHHHHCCCEEEE-ECCCC
Confidence 6641 12499999999999999999999999999876 57666
No 282
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=94.81 E-value=0.018 Score=54.23 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..++|+|+|. |++|+...+.++.+|++++ ..||..... ...|+..+.+++++..+ .|++++++|..
T Consensus 159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~~--aDiV~l~~Plt 226 (352)
T 3gg9_A 159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVL-VWGRENSKERARADGFAVAESKDALFEQ--SDVLSVHLRLN 226 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSHHHHHHHHHTTCEECSSHHHHHHH--CSEEEECCCCS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EECCCCCHHHHHhcCceEeCCHHHHHhh--CCEEEEeccCc
Confidence 3578999999 9999999999999999976 677753101 13477666789999887 99999999854
No 283
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.80 E-value=0.061 Score=49.88 Aligned_cols=188 Identities=12% Similarity=0.063 Sum_probs=101.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCC-cee---cCeecc-CC-------HHhhhhcCCCcEEEEecC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGG-KTH---LDLPVF-NT-------VKEARDATGAEATVIYVP 96 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g-~~i---~Gip~y-~s-------l~el~~~~~iDlavi~vp 96 (306)
.++|.|.|++|..|+...+.|.+.|+++++... +.... ..+ .++.++ -+ +.++.+ ++|+++.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEcCC
Confidence 468999999999999999999999999875543 22100 000 122221 12 344444 4999987654
Q ss_pred ch------hHHHHHHHHHHcC-CCEEEEecCCC-Chh---------HHHHHHHHHHHhcCC--eEEccCCCceecCcccc
Q psy8894 97 PP------GAAKAIHEALDAE-MPLIVCITEGI-PQL---------DMVKVKHRLIRQSKS--RLIGPNCPGIIAPEQCK 157 (306)
Q Consensus 97 ~~------~~~~~~~e~~~~G-i~~vvi~t~Gf-~e~---------~~~~~~~~~ar~~gi--~iiGPNc~Gi~~~~~~~ 157 (306)
.. ....+++.|.+.| ++.++.+|+.. .+. ......++++++.++ .++=|+ ++-+....
T Consensus 83 ~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg---~~g~~~~~ 159 (352)
T 1xgk_A 83 SQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAG---IYNNNFTS 159 (352)
T ss_dssp STTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC---EEGGGCBS
T ss_pred CCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEecc---eecCCchh
Confidence 32 3466778888889 98888777643 110 112222345677675 333343 33322110
Q ss_pred c--cCC-----CCCC-----C--CCCCEEEEecChhhHHHHHHHHHhCC---CceEEEEecCCCCCCCCCHHHHHHHhhc
Q psy8894 158 I--GIM-----PGHI-----H--QRGCVGVVSRSGTLTYEAVHQTTQVG---LGQTLCVGIGGDPFNGTNFIDCLEVFLK 220 (306)
Q Consensus 158 ~--~~~-----~~~~-----~--~~G~va~vSqSG~~~~~~~~~~~~~g---~g~s~~vs~Gn~~~~dv~~~d~l~~l~~ 220 (306)
. ..+ .... + ..+.+.+++--.-++..++..+.... .|-.+.++ ++ . +++.|+++.+.+
T Consensus 160 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~--~~--~-~s~~e~~~~i~~ 234 (352)
T 1xgk_A 160 LPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT--FE--T-LSPVQVCAAFSR 234 (352)
T ss_dssp SSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC--SE--E-ECHHHHHHHHHH
T ss_pred cccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe--cC--C-CCHHHHHHHHHH
Confidence 0 000 0000 1 22456666532455555554444320 34455555 34 3 899999998887
Q ss_pred CCCccEE
Q psy8894 221 DPETKGI 227 (306)
Q Consensus 221 D~~t~~I 227 (306)
--..+.-
T Consensus 235 ~~G~~~~ 241 (352)
T 1xgk_A 235 ALNRRVT 241 (352)
T ss_dssp HHTSCEE
T ss_pred HHCCCCc
Confidence 4444443
No 284
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.80 E-value=0.071 Score=51.61 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=65.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c----eecCeec-------cCCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K----THLDLPV-------FNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~----~i~Gip~-------y~sl~el~~~~~iDlavi~vp~ 97 (306)
.++|+|+|+ |.+|+.+.+.|.+.|++++ .++.+... + ...++.. +.++.++.+ ++|++|.++|.
T Consensus 3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~-v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~~ 78 (450)
T 1ff9_A 3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVT-VACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPY 78 (450)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEE-EEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCcCEEE-EEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCcc
Confidence 368999995 9999999999998898854 55543200 0 1112211 113445444 49999999998
Q ss_pred hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 98 PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.....+.+.|++.|.+. +. . ........++. +.|++.|++++
T Consensus 79 ~~~~~i~~a~l~~g~~v-vd-~-~~~~~~~~~l~-~aA~~aGv~~i 120 (450)
T 1ff9_A 79 TFHATVIKSAIRQKKHV-VT-T-SYVSPAMMELD-QAAKDAGITVM 120 (450)
T ss_dssp -CHHHHHHHHHHHTCEE-EE-S-SCCCHHHHHTH-HHHHHTTCEEE
T ss_pred ccchHHHHHHHhCCCeE-EE-e-ecccHHHHHHH-HHHHHCCCeEE
Confidence 77777788888888763 33 2 22223333443 46788888665
No 285
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=94.76 E-value=0.019 Score=53.44 Aligned_cols=84 Identities=13% Similarity=0.134 Sum_probs=57.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce---ecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT---HLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~---i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~ 104 (306)
.-++|+|+|. |++|+...+.++.+|++++ ..||.....+ ..|+. +.+++++... .|++++++|.. .+..++
T Consensus 144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~-~~~l~ell~~--aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 144 DNATVGFLGM-GAIGLAMADRLQGWGATLQ-YHEAKALDTQTEQRLGLR-QVACSELFAS--SDFILLALPLNADTLHLV 218 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHTTTSCCEEE-EECSSCCCHHHHHHHTEE-ECCHHHHHHH--CSEEEECCCCSTTTTTCB
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCCCcHhHHHhcCce-eCCHHHHHhh--CCEEEEcCCCCHHHHHHh
Confidence 3579999999 9999999999999999976 6677531111 23554 4589999876 99999999953 333334
Q ss_pred -HHHHH-cCCCEEEE
Q psy8894 105 -HEALD-AEMPLIVC 117 (306)
Q Consensus 105 -~e~~~-~Gi~~vvi 117 (306)
++..+ ..-..+++
T Consensus 219 ~~~~l~~mk~gailI 233 (330)
T 4e5n_A 219 NAELLALVRPGALLV 233 (330)
T ss_dssp CHHHHTTSCTTEEEE
T ss_pred CHHHHhhCCCCcEEE
Confidence 23333 34444443
No 286
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.75 E-value=0.17 Score=46.22 Aligned_cols=90 Identities=19% Similarity=0.165 Sum_probs=56.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCCcee-------cCeecc-------CCHHhhhhcCCCcEEEEe
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGGKTH-------LDLPVF-------NTVKEARDATGAEATVIY 94 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g~~i-------~Gip~y-------~sl~el~~~~~iDlavi~ 94 (306)
.++|.|.|++|-.|+...+.|.+.|+++++... +.. .... .++..+ .++.++.+..++|++|-+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT-VPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS-SSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcc-cchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 468999999999999999999999999775432 221 0110 122222 123344332248999987
Q ss_pred cCch------------------hHHHHHHHHHHcC-CCEEEEecC
Q psy8894 95 VPPP------------------GAAKAIHEALDAE-MPLIVCITE 120 (306)
Q Consensus 95 vp~~------------------~~~~~~~e~~~~G-i~~vvi~t~ 120 (306)
.... .+..+++.|.+.+ ++.++.+++
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 5421 1234677777776 888887776
No 287
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.75 E-value=0.084 Score=47.53 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce------ecCeeccC-------CHHhhhhcCCCcEEEEecCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT------HLDLPVFN-------TVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~------i~Gip~y~-------sl~el~~~~~iDlavi~vp~ 97 (306)
++|+|+|++|..|+.+.+.|++.|+++++.........+ -.|+.++. ++.++.+ ++|+++.+.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~ 89 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAF 89 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCch
Confidence 579999999999999999999999997654332210011 12443332 2444444 49999988764
Q ss_pred ---hhHHHHHHHHHHcC-CCEEEEecC
Q psy8894 98 ---PGAAKAIHEALDAE-MPLIVCITE 120 (306)
Q Consensus 98 ---~~~~~~~~e~~~~G-i~~vvi~t~ 120 (306)
.....+++.|.+.| ++.++ ++.
T Consensus 90 ~~~~~~~~l~~aa~~~g~v~~~v-~S~ 115 (318)
T 2r6j_A 90 PQILDQFKILEAIKVAGNIKRFL-PSD 115 (318)
T ss_dssp GGSTTHHHHHHHHHHHCCCCEEE-CSC
T ss_pred hhhHHHHHHHHHHHhcCCCCEEE-eec
Confidence 45677888888888 99876 443
No 288
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.74 E-value=0.14 Score=42.86 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=58.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCCCceecCeecc-CCHHhhh---hcCCCcEEEEecCch-----
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKGGKTHLDLPVF-NTVKEAR---DATGAEATVIYVPPP----- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~g~~i~Gip~y-~sl~el~---~~~~iDlavi~vp~~----- 98 (306)
.++|.|.|++|..|+...+.|.+.|. +++ .++.+.. ....++..+ -++.+.. +.. +|++|-+....
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~-~~~r~~~-~~~~~~~~~~~D~~~~~~~~~~~-~d~vi~~a~~~~~~~~ 81 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVI-APARKAL-AEHPRLDNPVGPLAELLPQLDGS-IDTAFCCLGTTIKEAG 81 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEE-CCBSSCC-CCCTTEECCBSCHHHHGGGCCSC-CSEEEECCCCCHHHHS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEE-EEeCCCc-ccCCCceEEeccccCHHHHHHhh-hcEEEECeeeccccCC
Confidence 46899999999999999999999987 776 4443321 122233333 2444432 222 79998876432
Q ss_pred -----------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 -----------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 -----------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
....+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 114 (215)
T 2a35_A 82 SEEAFRAVDFDLPLAVGKRALEMGARHYLVVSA 114 (215)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECC
Confidence 3456778888889998877666
No 289
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.68 E-value=0.082 Score=51.66 Aligned_cols=88 Identities=17% Similarity=0.104 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch-----------
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP----------- 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~----------- 98 (306)
+++|.|.|++|-.|+.+.+.|++.|+++++.+........+.+- .-..+.++.+ ++|++|-+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d-~~~~~~~~l~--~~D~Vih~A~~~~~~~~~~~~~~ 223 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWD-PLNPASDLLD--GADVLVHLAGEPIFGRFNDSHKE 223 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECC-TTSCCTTTTT--TCSEEEECCCC-----CCGGGHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeec-ccchhHHhcC--CCCEEEECCCCccccccchhHHH
Confidence 78999999999999999999999999987554332211122110 1122333333 499998764321
Q ss_pred --------hHHHHHHH-HHHcCCCEEEEecC
Q psy8894 99 --------GAAKAIHE-ALDAEMPLIVCITE 120 (306)
Q Consensus 99 --------~~~~~~~e-~~~~Gi~~vvi~t~ 120 (306)
.+..+++. +.+.|++.++.+++
T Consensus 224 ~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 224 AIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp HHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 14455666 44568888776554
No 290
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=94.68 E-value=0.034 Score=52.60 Aligned_cols=105 Identities=9% Similarity=0.092 Sum_probs=65.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--eecCeeccCCHHhhhhcCCCcEEEEecCch-hHHHHH-H
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--THLDLPVFNTVKEARDATGAEATVIYVPPP-GAAKAI-H 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i~Gip~y~sl~el~~~~~iDlavi~vp~~-~~~~~~-~ 105 (306)
-++|+|+|. |++|+...+.++.+|++++ ..||..... ...|+. +.+++++..+ .|++++++|.. .+..++ +
T Consensus 176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~~--aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 176 GSEIGIVGF-GDLGKALRRVLSGFRARIR-VFDPWLPRSMLEENGVE-PASLEDVLTK--SDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp SSEEEEECC-SHHHHHHHHHHTTSCCEEE-EECSSSCHHHHHHTTCE-ECCHHHHHHS--CSEEEECSCSSCC---CCCH
T ss_pred CCEEEEecC-CcccHHHHHhhhhCCCEEE-EECCCCCHHHHhhcCee-eCCHHHHHhc--CCEEEEcCcCCHHHHhhcCH
Confidence 579999999 9999999999999999976 677763111 124554 5689999887 99999999964 333333 2
Q ss_pred HHH-HcCCCEEE-EecCCCChhHHHHHHHHHHHhcCCe
Q psy8894 106 EAL-DAEMPLIV-CITEGIPQLDMVKVKHRLIRQSKSR 141 (306)
Q Consensus 106 e~~-~~Gi~~vv-i~t~Gf~e~~~~~~~~~~ar~~gi~ 141 (306)
+.. ..+-..++ +.+.|-. -+.+++.+ ..++..+.
T Consensus 251 ~~l~~mk~gailIN~aRG~~-vde~aL~~-aL~~g~i~ 286 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRADV-VDFDALMA-AVSSGHIV 286 (365)
T ss_dssp HHHHTSCTTCEEEECSCGGG-SCHHHHHH-HHHTTSSE
T ss_pred HHHhcCCCCcEEEECcCCch-hCHHHHHH-HHHcCCce
Confidence 333 34444444 3444422 22233433 34555554
No 291
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.67 E-value=0.041 Score=50.81 Aligned_cols=88 Identities=10% Similarity=0.144 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--cC-------------eeccCCHHhhhhcCCCcEEEEe
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--LD-------------LPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--~G-------------ip~y~sl~el~~~~~iDlavi~ 94 (306)
.++|+|+|+ |.+|......|.+.|+++. .+++...-+.+ .| +++..+++++ . +.|+++++
T Consensus 3 ~mkI~IiGa-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGA-GAVGGYLGARLALAGEAIN-VLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-G--EQDVVIVA 77 (335)
T ss_dssp CCCEEEESC-CHHHHHHHHHHHHTTCCEE-EECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-C--CCSEEEEC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-C--CCCEEEEe
Confidence 368999999 9999999889988898865 55542100110 12 2334567765 3 38999999
Q ss_pred cCchhHHHHHHHHHHc-C-CCEEEEecCCC
Q psy8894 95 VPPPGAAKAIHEALDA-E-MPLIVCITEGI 122 (306)
Q Consensus 95 vp~~~~~~~~~e~~~~-G-i~~vvi~t~Gf 122 (306)
+|+....++++++... + =..++.++.|+
T Consensus 78 vk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 78 VKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 9999888888776542 2 23455578896
No 292
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=94.64 E-value=0.037 Score=49.13 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=56.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh--------
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG-------- 99 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-------- 99 (306)
..+++|.|.|++|-.|+...+.|.+.|+++++ ++.+. .. +.-..++.++.+..++|++|-+.....
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~--~D---l~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 83 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIP-TDVQD--LD---ITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQY 83 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEE-ECTTT--CC---TTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCH
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEe-ccCcc--CC---CCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCH
Confidence 45789999999999999999999999998774 44432 11 112234555554224999987654211
Q ss_pred ----------HHHHHHHHHHcCCCEEEEecC
Q psy8894 100 ----------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 100 ----------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+..+++.|.+.|+ .++.+++
T Consensus 84 ~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 84 DLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 3567788888888 5555554
No 293
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.61 E-value=0.079 Score=46.78 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEe-eCCCCCCceecCeec-------cCCHHhhhhcCCCcEEEEecC---c-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGG-VSPGKGGKTHLDLPV-------FNTVKEARDATGAEATVIYVP---P- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~-VnP~~~g~~i~Gip~-------y~sl~el~~~~~iDlavi~vp---~- 97 (306)
.++|.|.|++|-+|+...+.|.+.|++++.. .++.. .+-.++.. ..++.++.+. +|++|-+.. .
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~Ag~~~~~ 78 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD--PAGPNEECVQCDLADANAVNAMVAG--CDGIVHLGGISVEK 78 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCC--CCCTTEEEEECCTTCHHHHHHHHTT--CSEEEECCSCCSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcc--ccCCCCEEEEcCCCCHHHHHHHHcC--CCEEEECCCCcCcC
Confidence 3689999999999999999999999987643 33322 11112222 2234455554 999987532 1
Q ss_pred ----------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ----------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ----------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.+++.++.+++
T Consensus 79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 12345778888899988887775
No 294
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.56 E-value=0.098 Score=48.58 Aligned_cols=90 Identities=10% Similarity=0.025 Sum_probs=57.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--cCeecc-------CCHHhhhhcCCCcEEEEecCch-
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--LDLPVF-------NTVKEARDATGAEATVIYVPPP- 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--~Gip~y-------~sl~el~~~~~iDlavi~vp~~- 98 (306)
+.++|.|.|++|-.|+...+.|.+.|+++++........... .++.++ .++.++.+ ++|++|-+....
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC--CCCEEEECceecC
Confidence 347899999999999999999999999987543322101111 122222 12444444 499998765321
Q ss_pred ------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 1345677888889988877665
No 295
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.55 E-value=0.094 Score=47.35 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=55.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--------eecCeecc-------CCHHhhhhcCCCcEEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--------THLDLPVF-------NTVKEARDATGAEATVI 93 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--------~i~Gip~y-------~sl~el~~~~~iDlavi 93 (306)
..++|.|.|++|-.|+...+.|.+.|+++++......... .-.++..+ .++.++.+...+|++|-
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999999999875543221000 00122222 12334443224799987
Q ss_pred ecCch------------------hHHHHHHHHHHcCC-CEEEEecC
Q psy8894 94 YVPPP------------------GAAKAIHEALDAEM-PLIVCITE 120 (306)
Q Consensus 94 ~vp~~------------------~~~~~~~e~~~~Gi-~~vvi~t~ 120 (306)
+.... .+..+++.|.+.|+ +.++.+++
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 64321 13456777888886 77776664
No 296
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=94.49 E-value=0.16 Score=45.54 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=54.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--ecCeecc------CCHHhhhhcCCCcEEEEecCc-----
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--HLDLPVF------NTVKEARDATGAEATVIYVPP----- 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--i~Gip~y------~sl~el~~~~~iDlavi~vp~----- 97 (306)
++|.|.|++|-.|+...+.|.+.| .++...+......+ -.++..+ .++.++.+. +|+++-+...
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKG--AEEVWHIAANPDVRI 78 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHHHTT--CSEEEECCCCCCCC-
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHHhcC--CCEEEECCCCCChhh
Confidence 479999999999999999999989 54434433221111 1112111 345555544 9999866432
Q ss_pred -------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 -------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 -------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 12344777888889988887776
No 297
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=94.47 E-value=0.033 Score=51.90 Aligned_cols=87 Identities=13% Similarity=-0.025 Sum_probs=57.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCe---EEEeeCCCCCCce--ecC--eeccC-CHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTK---VVGGVSPGKGGKT--HLD--LPVFN-TVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~---vv~~VnP~~~g~~--i~G--ip~y~-sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
.+|+|+||+|..|+...+.+.+.++. ++.....+..|+. +.| ++++. +.+++ ++|+++.|+|.....+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~~~----~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEGPL----PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSSCC----CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChhhc----CCCEEEECCCccchHH
Confidence 36999999999999999988865544 3222222222222 222 23332 11222 4899999999999999
Q ss_pred HHHHHHHcCCCEEEEecCCC
Q psy8894 103 AIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~Gf 122 (306)
.+..+.+.|++.|. .++-|
T Consensus 77 ~a~~~~~~G~~vId-~s~~~ 95 (331)
T 2yv3_A 77 KALVWAEGGALVVD-NSSAW 95 (331)
T ss_dssp HHHHHHHTTCEEEE-CSSSS
T ss_pred HHHHHHHCCCEEEE-CCCcc
Confidence 99999999997443 56555
No 298
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.40 E-value=0.069 Score=42.36 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=61.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCeec-cCC------HHhhhhcCCCcEEEEecCchhH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT--HLDLPV-FNT------VKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~--i~Gip~-y~s------l~el~~~~~iDlavi~vp~~~~ 100 (306)
++|+|+|+ |+.|+...+.|.+.|++++ .++.+... ++ -.|..+ +.+ +.++.. .+.|++++++|....
T Consensus 7 ~~v~I~G~-G~iG~~la~~L~~~g~~V~-~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~-~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 7 YEYIVIGS-EAAGVGLVRELTAAGKKVL-AVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDL-EGVSAVLITGSDDEF 83 (141)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCC-TTCSEEEECCSCHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCc-ccCCEEEEecCCHHH
Confidence 57999999 9999999999999999976 55544210 00 124332 222 222211 248999999986544
Q ss_pred -HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCC-eEEccC
Q psy8894 101 -AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKS-RLIGPN 146 (306)
Q Consensus 101 -~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi-~iiGPN 146 (306)
..++..+.+.|...++.-+.. ++..+ ..++.|+ .++-|.
T Consensus 84 n~~~~~~a~~~~~~~iia~~~~--~~~~~-----~l~~~G~~~vi~p~ 124 (141)
T 3llv_A 84 NLKILKALRSVSDVYAIVRVSS--PKKKE-----EFEEAGANLVVLVA 124 (141)
T ss_dssp HHHHHHHHHHHCCCCEEEEESC--GGGHH-----HHHHTTCSEEEEHH
T ss_pred HHHHHHHHHHhCCceEEEEEcC--hhHHH-----HHHHcCCCEEECHH
Confidence 334555556675555543433 22211 2355666 455554
No 299
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.36 E-value=0.14 Score=45.67 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=54.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--ecCeecc-CCHHhh--hhcCCCcEEEEecCc--------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--HLDLPVF-NTVKEA--RDATGAEATVIYVPP-------- 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--i~Gip~y-~sl~el--~~~~~iDlavi~vp~-------- 97 (306)
++|.|.|++|-.|+...+.|.+.|++++..........+ ..++..+ .++.+. .+....|++|-+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~d~vih~A~~~~~~~~~~ 80 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKGDVVFHFAANPEVRLSTT 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCCSEEEECCSSCSSSGGGS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCCCEEEECCCCCCchhhhh
Confidence 479999999999999999999999998744321110011 1122222 233221 111112888865431
Q ss_pred ----------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ----------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ----------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 81 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 81 EPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 12346778888889988887665
No 300
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=94.35 E-value=0.045 Score=48.11 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=52.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccC-------CHHhhhhcCCCcEEEEecCc------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFN-------TVKEARDATGAEATVIYVPP------ 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~-------sl~el~~~~~iDlavi~vp~------ 97 (306)
++|.|.|++|..|+...+.|.+.|++++. ++.+.......++..+. ++.++.+ ++|++|-+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~~~~ 79 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRL-SDIVDLGAAEAHEEIVACDLADAQAVHDLVK--DCDGIIHLGGVSVERPW 79 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEE-CCSSCCCCCCTTEEECCCCTTCHHHHHHHHT--TCSEEEECCSCCSCCCH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEE-EeCCCccccCCCccEEEccCCCHHHHHHHHc--CCCEEEECCcCCCCCCH
Confidence 57999999999999999999888988764 43322111112222221 2333333 37887765422
Q ss_pred --------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 80 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 110 (267)
T 3ay3_A 80 NDILQANIIGAYNLYEAARNLGKPRIVFASS 110 (267)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 11345566666677776665554
No 301
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=94.27 E-value=0.13 Score=46.28 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=57.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ceec-Ceecc-------CCHHhhhhcCCCcEEEEecCch---
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTHL-DLPVF-------NTVKEARDATGAEATVIYVPPP--- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i~-Gip~y-------~sl~el~~~~~iDlavi~vp~~--- 98 (306)
++|.|.|++|-.|+...+.|.+.|+++++........ +.+. ++..+ .++.++.++.++|++|-+....
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~ 81 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVG 81 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCcc
Confidence 5799999999999999999999999987543322100 1111 22211 1244444422489998765321
Q ss_pred ---------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ---------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ---------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 82 VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 2345677788889988887665
No 302
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.14 E-value=0.12 Score=46.83 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCC---ceecCeeccC-------CHHhhhhcCCCcEEEEecCc-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGG---KTHLDLPVFN-------TVKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g---~~i~Gip~y~-------sl~el~~~~~iDlavi~vp~- 97 (306)
.++|.|.|++|-.|+...+.|.+.|+++++... +.... .++.++..+. ++.++.++.++|++|-+...
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 368999999999999999999999999875443 21100 1112332221 24444441149999976532
Q ss_pred --------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 100 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 100 KDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp SCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 12456778888889988887664
No 303
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.05 E-value=0.029 Score=49.66 Aligned_cols=82 Identities=11% Similarity=0.077 Sum_probs=55.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh------------
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG------------ 99 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~------------ 99 (306)
+|.|.|++|..|+...+.|.+.|+++++ ++... .. +.-..++.++.+..++|++|-+.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~--~D---~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~ 80 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYP-FDKKL--LD---ITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAY 80 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEE-ECTTT--SC---TTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEE-ecccc--cC---CCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHH
Confidence 8999999999999999999988998774 44322 11 112234555555324999987643211
Q ss_pred ------HHHHHHHHHHcCCCEEEEecC
Q psy8894 100 ------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 100 ------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+..+++.|.+.|++ ++.+++
T Consensus 81 ~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 81 VINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp HHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 34578888888997 554554
No 304
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.00 E-value=0.014 Score=47.07 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=48.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc----eecCee--ccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK----THLDLP--VFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip--~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
.++|+|+|+ |.+|+...+.+.+.|++ +..++++.... +..|.. .+.++.++.+. .|+++.++|...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKN--NDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCC
Confidence 679999998 99999998888888999 55777653111 112333 56678887765 999999998763
No 305
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.97 E-value=0.14 Score=46.88 Aligned_cols=85 Identities=9% Similarity=-0.019 Sum_probs=53.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCceec-----------------CeeccCCHHhhhhcCCCcE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGKTHL-----------------DLPVFNTVKEARDATGAEA 90 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~~i~-----------------Gip~y~sl~el~~~~~iDl 90 (306)
++++|+|+|+ |.+|......+.+.|+ ++ ..+|++. +... .+....+++++ . +.|+
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V-~l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~-~--~aDi 75 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADV-VLFDIAE--GIPQGKALDITHSMVMFGSTSKVIGTDDYADI-S--GSDV 75 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEE-EEECSSS--SHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG-T--TCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceE-EEEeCCc--hHHHHHHHHHHhhhhhcCCCcEEEECCCHHHh-C--CCCE
Confidence 4578999999 9999988888888888 74 4666653 1111 12223455333 3 3899
Q ss_pred EEEecC----------------chhHHHHHHHHHHcCCCEEEEecC
Q psy8894 91 TVIYVP----------------PPGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 91 avi~vp----------------~~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+|++++ .+...++++++.+..-+.+++..+
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s 121 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT 121 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 999983 123456667766655555444333
No 306
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.94 E-value=0.42 Score=46.06 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=66.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee--cCeeccC-CHHhhhh-------------cCCCcEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH--LDLPVFN-TVKEARD-------------ATGAEATV 92 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i--~Gip~y~-sl~el~~-------------~~~iDlav 92 (306)
-.+.-|+|. |.+|......|.+.|++++ ++|.+..- +++ ...|+|. .++++.. ..+.|+++
T Consensus 11 ~~~~~ViGl-GyvGlp~A~~La~~G~~V~-~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 11 GSKLTVVGL-GYIGLPTSIMFAKHGVDVL-GVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp -CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred CCccEEEee-CHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 356889999 9999998899999999976 55544300 111 1345554 3444310 12489999
Q ss_pred EecCchh------------HHHHHHHHHH-cCCCEEEEecCCCChhHHHHHHHHHHHhcCC
Q psy8894 93 IYVPPPG------------AAKAIHEALD-AEMPLIVCITEGIPQLDMVKVKHRLIRQSKS 140 (306)
Q Consensus 93 i~vp~~~------------~~~~~~e~~~-~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi 140 (306)
+++|... +....+...+ ..-..+++..+..+....+++.+.+.++.|.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~ 149 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGF 149 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTC
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCC
Confidence 9999875 4555555554 2345566667777655445544444455554
No 307
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.91 E-value=0.091 Score=44.52 Aligned_cols=86 Identities=19% Similarity=0.173 Sum_probs=50.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--cCeecc-CCHHh----hhhcCCCcEEEEecCc------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--LDLPVF-NTVKE----ARDATGAEATVIYVPP------ 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--~Gip~y-~sl~e----l~~~~~iDlavi~vp~------ 97 (306)
++|.|.|++|..|+...+.|.+.|++++...-......+. .++..+ -++.+ ... ++|++|-+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLD--SVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHT--TCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcc--cCCEEEECCccCCCcch
Confidence 3699999999999999999999999977443211000000 122222 13322 222 37888776533
Q ss_pred -----hhHHHHHHHHHHcCCCEEEEec
Q psy8894 98 -----PGAAKAIHEALDAEMPLIVCIT 119 (306)
Q Consensus 98 -----~~~~~~~~e~~~~Gi~~vvi~t 119 (306)
..+..+++.|.+.| +.++.++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~S 104 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFIL 104 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEe
Confidence 23445556666667 5566554
No 308
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=93.90 E-value=0.12 Score=45.90 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=53.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCCc---eecCeeccC------CHHhhhhc---CCCcEEEEecCch
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGGK---THLDLPVFN------TVKEARDA---TGAEATVIYVPPP 98 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g~---~i~Gip~y~------sl~el~~~---~~iDlavi~vp~~ 98 (306)
+|.|.|++|-.|+...+.|.+.| +++++...... .. ...++.+.. ++.++.+. .++|++|-+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC-CchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence 48999999999999999999999 78764433221 11 111221111 23444331 1389998765321
Q ss_pred ----------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ----------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ----------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|+ .++.+++
T Consensus 80 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 80 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 14567788888888 4554554
No 309
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=93.89 E-value=0.04 Score=51.43 Aligned_cols=83 Identities=13% Similarity=0.141 Sum_probs=58.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-eecCeeccCCHHhhhhcCCCcEEEEecCchh-HHHH--HH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-THLDLPVFNTVKEARDATGAEATVIYVPPPG-AAKA--IH 105 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i~Gip~y~sl~el~~~~~iDlavi~vp~~~-~~~~--~~ 105 (306)
-+++.|+|. |+.|+...+.++.+|++++ ..||..... ...++ .|.+++++..+ .|++++.+|-.. +..+ -+
T Consensus 141 g~tvGIiG~-G~IG~~va~~~~~fg~~v~-~~d~~~~~~~~~~~~-~~~~l~ell~~--sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 141 RLTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKREDLKEKGC-VYTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHTTC-EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred CcEEEEECc-chHHHHHHHhhcccCceee-ecCCccchhhhhcCc-eecCHHHHHhh--CCEEEEcCCCChhhccCcCHH
Confidence 578999999 9999999999999999987 567754111 11233 36789999987 999999988532 2222 24
Q ss_pred HHHHcCCCEEEE
Q psy8894 106 EALDAEMPLIVC 117 (306)
Q Consensus 106 e~~~~Gi~~vvi 117 (306)
+...+.-.+++|
T Consensus 216 ~l~~mk~~a~lI 227 (334)
T 3kb6_A 216 RISLMKDGVYLI 227 (334)
T ss_dssp HHHHSCTTEEEE
T ss_pred HHhhcCCCeEEE
Confidence 444555565554
No 310
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=93.82 E-value=0.1 Score=48.40 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=57.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCCc-e---ecCeeccC-C------HHhhhhcCCCcEEEEecC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGGK-T---HLDLPVFN-T------VKEARDATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g~-~---i~Gip~y~-s------l~el~~~~~iDlavi~vp 96 (306)
+.++|.|.|++|-.|+...+.|.+.| +++++......... . ..++..+. + +.++.+ ++|++|-+..
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~A~ 108 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD--EYDYVFHLAT 108 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS--CCSEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh--CCCEEEECCC
Confidence 34789999999999999999999999 99875432211000 0 12333222 2 333333 4999997654
Q ss_pred ch------------------hHHHHHHHHHHc-CCCEEEEecC
Q psy8894 97 PP------------------GAAKAIHEALDA-EMPLIVCITE 120 (306)
Q Consensus 97 ~~------------------~~~~~~~e~~~~-Gi~~vvi~t~ 120 (306)
.. .+..+++.|.+. +++.++.+++
T Consensus 109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 32 234566777777 8988776665
No 311
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=93.79 E-value=0.13 Score=46.19 Aligned_cols=91 Identities=13% Similarity=0.183 Sum_probs=55.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeecc-------CCHHhhhhcCCCcEEEEecCchh-
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVF-------NTVKEARDATGAEATVIYVPPPG- 99 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y-------~sl~el~~~~~iDlavi~vp~~~- 99 (306)
.+.++|.|.|++|-.|+...+.|.+.|+++++...... ... .++..+ .++.++.+...+|++|-+.....
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~-l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 87 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-AKL-PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV 87 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT-CCC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc-ccc-ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch
Confidence 45688999999999999999999999999875433221 111 122222 12334433224899997654211
Q ss_pred -----------------HHHHHHHHHHc-CCCEEEEecC
Q psy8894 100 -----------------AAKAIHEALDA-EMPLIVCITE 120 (306)
Q Consensus 100 -----------------~~~~~~e~~~~-Gi~~vvi~t~ 120 (306)
+..+++.|.+. +++.++.+++
T Consensus 88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 34566777555 6888877665
No 312
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.74 E-value=0.1 Score=47.61 Aligned_cols=90 Identities=16% Similarity=0.167 Sum_probs=58.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee------------cCeecc-------CCHHhhhhcCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH------------LDLPVF-------NTVKEARDATGA 88 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i------------~Gip~y-------~sl~el~~~~~i 88 (306)
+.++|.|.|++|-.|+...+.|.+.|+++++........ ... .++..+ .++.++.+ ++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CC
Confidence 357899999999999999999999999987543321100 000 123222 12444444 49
Q ss_pred cEEEEecCch------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 89 EATVIYVPPP------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 89 Dlavi~vp~~------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
|++|-+.... .+..+++.|.+.|++.++.+++
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 9999875421 1345677888889988876664
No 313
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.72 E-value=0.22 Score=44.81 Aligned_cols=90 Identities=19% Similarity=0.163 Sum_probs=56.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee---------cCeecc--------CCHHhhhhcCCCcEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH---------LDLPVF--------NTVKEARDATGAEAT 91 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i---------~Gip~y--------~sl~el~~~~~iDla 91 (306)
+.++|.|.|++|-.|+...+.|.+.|+++++..........+ .++..+ .++.++.+ ++|++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGV 87 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEE
Confidence 357899999999999999999999999987543321000000 122222 23444443 48999
Q ss_pred EEecCc---------------hhHHHHHHHHHH-cCCCEEEEecC
Q psy8894 92 VIYVPP---------------PGAAKAIHEALD-AEMPLIVCITE 120 (306)
Q Consensus 92 vi~vp~---------------~~~~~~~~e~~~-~Gi~~vvi~t~ 120 (306)
|-+... ..+..+++.|.+ .+++.++.+++
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 876532 123456666763 67888887776
No 314
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.70 E-value=0.18 Score=46.30 Aligned_cols=88 Identities=17% Similarity=0.118 Sum_probs=56.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCcee---cCeecc--------CCHHhhhhcCCCcEEEEecCc
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTH---LDLPVF--------NTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i---~Gip~y--------~sl~el~~~~~iDlavi~vp~ 97 (306)
.++|.|.|++|-.|+.+.+.|++. |+++++.......-... .++.++ .++.++.+. +|++|-+...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~--~d~Vih~A~~ 101 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKK--CDVILPLVAI 101 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHH--CSEEEECBCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhcc--CCEEEEcCcc
Confidence 468999999999999999999988 99987554322111111 233322 124444444 9999865331
Q ss_pred ------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.| +.++.+++
T Consensus 102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 12245788888889 77776665
No 315
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.69 E-value=0.047 Score=51.18 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=58.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecCeeccC--------------------CHHhhhhc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLDLPVFN--------------------TVKEARDA 85 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~Gip~y~--------------------sl~el~~~ 85 (306)
.||+|+|+ |+.|+...+.+.+. ++++++..+...... ...|..+|. +..++..
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~- 80 (343)
T 2yyy_A 3 AKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE- 80 (343)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG-
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc-
Confidence 48999999 99999999988776 788886644321000 011222222 2333333
Q ss_pred CCCcEEEEecCchhHHHHHH-HHHHcCCCEEEEecCCC
Q psy8894 86 TGAEATVIYVPPPGAAKAIH-EALDAEMPLIVCITEGI 122 (306)
Q Consensus 86 ~~iDlavi~vp~~~~~~~~~-e~~~~Gi~~vvi~t~Gf 122 (306)
++|+++.|+|.....+..+ .++++|.+ ++ .+.+.
T Consensus 81 -~vDiV~eatg~~~s~~~a~~~~l~aG~~-VI-~sap~ 115 (343)
T 2yyy_A 81 -DADIVVDGAPKKIGKQNLENIYKPHKVK-AI-LQGGE 115 (343)
T ss_dssp -GCSEEEECCCTTHHHHHHHHTTTTTTCE-EE-ECTTS
T ss_pred -CCCEEEECCCccccHHHHHHHHHHCCCE-EE-ECCCc
Confidence 4999999999988888886 88899955 44 45554
No 316
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.63 E-value=0.032 Score=54.64 Aligned_cols=91 Identities=14% Similarity=0.059 Sum_probs=59.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--------------c-------------CeeccCCHHhh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--------------L-------------DLPVFNTVKEA 82 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--------------~-------------Gip~y~sl~el 82 (306)
.++|+|||+ |.||......+.+.|++++ ..|++...-+- . .+....+++++
T Consensus 5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 5 VQTVAVIGS-GTMGAGIAEVAASHGHQVL-LYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 468999999 9999999999999999965 56655310000 1 23345566654
Q ss_pred hhcCCCcEEEEecCchhH--HHHHHHHHHc-CCCEEE-EecCCCChh
Q psy8894 83 RDATGAEATVIYVPPPGA--AKAIHEALDA-EMPLIV-CITEGIPQL 125 (306)
Q Consensus 83 ~~~~~iDlavi~vp~~~~--~~~~~e~~~~-Gi~~vv-i~t~Gf~e~ 125 (306)
. . .|++|.++|.... .++++++.+. .-..++ .-|++++.+
T Consensus 83 ~-~--aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~ 126 (483)
T 3mog_A 83 A-A--ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT 126 (483)
T ss_dssp G-G--CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred c-C--CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH
Confidence 3 3 8999999998743 4666666543 334444 246777654
No 317
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.62 E-value=0.27 Score=44.32 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=55.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCCce----e---cCeecc-------CCHHhhhhcCCCcEEEEec
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGGKT----H---LDLPVF-------NTVKEARDATGAEATVIYV 95 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g~~----i---~Gip~y-------~sl~el~~~~~iDlavi~v 95 (306)
++|.|.|++|-.|+...+.|.+.|+++++... .+....+ + ..+..+ .++.++.+...+|++|-+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 57999999999999999999999999875432 1110000 0 012211 1233443322389998765
Q ss_pred Cch------------------hHHHHHHHHHHcCCC-EEEEecC
Q psy8894 96 PPP------------------GAAKAIHEALDAEMP-LIVCITE 120 (306)
Q Consensus 96 p~~------------------~~~~~~~e~~~~Gi~-~vvi~t~ 120 (306)
... .+..+++.|.+.+++ .++.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS 125 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 125 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 431 134577888888886 6665554
No 318
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=93.60 E-value=0.053 Score=49.81 Aligned_cols=79 Identities=19% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCc----eecC--eeccCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGK----THLD--LPVFNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~----~i~G--ip~y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
+.++|+|+|+ |.+|+...+.+.+. |++.+...|+..... +..+ +..+.+++++.+. .|+++.++|.. .
T Consensus 134 ~~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~--aDiVi~atp~~--~ 208 (312)
T 2i99_A 134 SSEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAG--ADVIITVTLAT--E 208 (312)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTT--CSEEEECCCCS--S
T ss_pred CCcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhc--CCEEEEEeCCC--C
Confidence 4678999999 99999998888775 885555777764111 1124 6678889888765 99999999853 3
Q ss_pred HHHH-HHHHcCC
Q psy8894 102 KAIH-EALDAEM 112 (306)
Q Consensus 102 ~~~~-e~~~~Gi 112 (306)
++++ +.++.|.
T Consensus 209 ~v~~~~~l~~g~ 220 (312)
T 2i99_A 209 PILFGEWVKPGA 220 (312)
T ss_dssp CCBCGGGSCTTC
T ss_pred cccCHHHcCCCc
Confidence 4443 3444554
No 319
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=93.52 E-value=0.21 Score=44.08 Aligned_cols=87 Identities=13% Similarity=0.061 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCe---EEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch-------
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTK---VVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP------- 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~---vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~------- 98 (306)
+.++|.|.|++|-.|+...+.|++.|+. ....+.... .++.-..++.++.+..++|++|-+....
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 79 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKD-----ADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNI 79 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTT-----CCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCcee-----cccCCHHHHHHHHhhcCCCEEEECceecccccccc
Confidence 4678999999999999999999998761 111111111 1111122355555544599999764321
Q ss_pred ------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 80 ~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 80 KYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 1234688888899998876565
No 320
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.48 E-value=0.064 Score=42.91 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=61.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e--ecCeecc-CC------HHhhhhcCCCcEEEEecCchhH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T--HLDLPVF-NT------VKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~--i~Gip~y-~s------l~el~~~~~iDlavi~vp~~~~ 100 (306)
.+|+|+|+ |+.|+...+.|.+.|++++ .++.+...- + -.|++++ .+ +.++.- .+.|++|+++|.+..
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~-vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~~~~ 84 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLV-VIETSRTRVDELRERGVRAVLGNAANEEIMQLAHL-ECAKWLILTIPNGYE 84 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTG-GGCSEEEECCSCHHH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCc-ccCCEEEEECCChHH
Confidence 57999999 9999999999999999976 666553100 0 1355533 22 222211 148999999998654
Q ss_pred HH-HHHHHHHc-CCCEEEEecCCCChhHHHHHHHHHHHhcCC-eEEccC
Q psy8894 101 AK-AIHEALDA-EMPLIVCITEGIPQLDMVKVKHRLIRQSKS-RLIGPN 146 (306)
Q Consensus 101 ~~-~~~e~~~~-Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi-~iiGPN 146 (306)
.. ++..+.+. +...++.-+.. ++. . +..++.|+ .++-|.
T Consensus 85 n~~~~~~a~~~~~~~~iiar~~~--~~~-~----~~l~~~G~d~vi~p~ 126 (140)
T 3fwz_A 85 AGEIVASARAKNPDIEIIARAHY--DDE-V----AYITERGANQVVMGE 126 (140)
T ss_dssp HHHHHHHHHHHCSSSEEEEEESS--HHH-H----HHHHHTTCSEEEEHH
T ss_pred HHHHHHHHHHHCCCCeEEEEECC--HHH-H----HHHHHCCCCEEECch
Confidence 43 44545444 22334433322 221 1 13356776 566554
No 321
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=93.47 E-value=0.29 Score=44.97 Aligned_cols=90 Identities=11% Similarity=0.154 Sum_probs=55.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC-----Ccee---------cCeecc-CC------HHhhhhcCCCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG-----GKTH---------LDLPVF-NT------VKEARDATGAE 89 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~-----g~~i---------~Gip~y-~s------l~el~~~~~iD 89 (306)
++|.|.|++|-.|+...+.|.+.|++++........ -+.+ .++..+ -+ +.++.+...+|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999998754322110 0000 122222 12 33333322479
Q ss_pred EEEEecCch------------------hHHHHHHHHHHcCC---CEEEEecC
Q psy8894 90 ATVIYVPPP------------------GAAKAIHEALDAEM---PLIVCITE 120 (306)
Q Consensus 90 lavi~vp~~------------------~~~~~~~e~~~~Gi---~~vvi~t~ 120 (306)
++|-+.... .+..+++.|.+.++ +.++.+++
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 998764321 12456778888888 67776664
No 322
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.39 E-value=0.17 Score=46.53 Aligned_cols=89 Identities=13% Similarity=0.265 Sum_probs=58.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CC-eEEEeeCCCCCCc-----ee--cCeecc-------CCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GT-KVVGGVSPGKGGK-----TH--LDLPVF-------NTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~-~vv~~VnP~~~g~-----~i--~Gip~y-------~sl~el~~~~~iDlavi 93 (306)
.++|.|.|++|..|+...+.|.+. |+ +++ .++.+.... ++ .++..+ .++.++.+ ++|++|-
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~-~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih 97 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKII-VYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE--GVDICIH 97 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEE-EEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEE-EEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence 478999999999999999999888 97 766 443321000 00 122222 23444444 4999997
Q ss_pred ecCchh------------------HHHHHHHHHHcCCCEEEEecCC
Q psy8894 94 YVPPPG------------------AAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 94 ~vp~~~------------------~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
+..... +..+++.|.+.|++.++.+++.
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~ 143 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD 143 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 754221 2467788888999998887763
No 323
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.30 E-value=0.2 Score=45.45 Aligned_cols=91 Identities=21% Similarity=0.276 Sum_probs=57.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee---cCeecc-CC------HHhhhhcCCCcEEEEecCc-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH---LDLPVF-NT------VKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i---~Gip~y-~s------l~el~~~~~iDlavi~vp~- 97 (306)
.++|.|.|++|..|+...+.|.+.|+++++......... .+ .++.++ -+ +.++.+...+|++|-+...
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 100 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASY 100 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceec
Confidence 468999999999999999999999999875533211001 11 233222 12 3333332238999876432
Q ss_pred --------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 101 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 101 KDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp SCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12456778888889988876664
No 324
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.29 E-value=0.1 Score=46.25 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=56.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeec-------cCCHHhhhhcCCCcEEEEecCc-----
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPV-------FNTVKEARDATGAEATVIYVPP----- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~-------y~sl~el~~~~~iDlavi~vp~----- 97 (306)
.++|.|.|+ |-.|+...+.|.+.|+++++...... ..-.++.. ..++.++.+. .+|++|-+...
T Consensus 3 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~~~~~ 78 (286)
T 3gpi_A 3 LSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQ--PMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAASEYSD 78 (286)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTS--CCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHHHHC-
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcc--ccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCCCCCH
Confidence 368999995 99999999999999999875432211 11112222 1223344332 39999877532
Q ss_pred --------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++.++.+++
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 79 EHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp ----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 23667788888889988876664
No 325
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.04 E-value=0.34 Score=42.89 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
.++|+|+|+ |..|....++|...|..-+..||+..
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 578999999 88999999999999986455888875
No 326
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=92.96 E-value=0.21 Score=45.23 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=56.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC------Cce----e-----cCeecc-------CCHHhhhhcCCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG------GKT----H-----LDLPVF-------NTVKEARDATGA 88 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~------g~~----i-----~Gip~y-------~sl~el~~~~~i 88 (306)
++|.|.|++|-.|+...+.|.+.|+++++....... ..+ + .++..+ .++.++.+..++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 689999999999999999999999998754321110 000 0 011111 124444442248
Q ss_pred cEEEEecCch------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 89 EATVIYVPPP------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 89 Dlavi~vp~~------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
|++|-+.... .+..+++.|.+.|++.++.+++
T Consensus 83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9988765421 2345677777889988877664
No 327
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=92.96 E-value=0.42 Score=43.61 Aligned_cols=90 Identities=10% Similarity=0.082 Sum_probs=54.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-----cee--------cCeeccC-C------HHhhhhcCCCcE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-----KTH--------LDLPVFN-T------VKEARDATGAEA 90 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-----~~i--------~Gip~y~-s------l~el~~~~~iDl 90 (306)
++|.|.|++|-.|+...+.|.+.|++++......... .++ .++..+. + +.++.+...+|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence 5799999999999999999999999977443211100 000 1222221 2 333333224799
Q ss_pred EEEecCc------------------hhHHHHHHHHHHcCC---CEEEEecC
Q psy8894 91 TVIYVPP------------------PGAAKAIHEALDAEM---PLIVCITE 120 (306)
Q Consensus 91 avi~vp~------------------~~~~~~~~e~~~~Gi---~~vvi~t~ 120 (306)
+|-+... ..+..+++.|.+.++ +.++.+++
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS 132 (372)
T 1db3_A 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST 132 (372)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 8876431 123456788888888 67776664
No 328
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=92.82 E-value=0.096 Score=46.45 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=53.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee-cCeeccCCHHhhhhcCCCcEEEEecCch-----------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH-LDLPVFNTVKEARDATGAEATVIYVPPP----------- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i-~Gip~y~sl~el~~~~~iDlavi~vp~~----------- 98 (306)
++|.|.|++|-.|+...+.|. .|+++++ ++.+. ..+ .++.-..++.++.+..++|+++-+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~-~~r~~--~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~ 76 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIA-LDVHS--KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPEL 76 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEE-ECTTC--SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEE-ecccc--ccccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHH
Confidence 379999999999999999888 7999874 44332 111 1121122344444322489998765321
Q ss_pred -------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 -------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 -------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++ ++.+++
T Consensus 77 ~~~~n~~~~~~l~~a~~~~~~~-~v~~SS 104 (299)
T 1n2s_A 77 AQLLNATSVEAIAKAANETGAW-VVHYST 104 (299)
T ss_dssp HHHHHTHHHHHHHHHHTTTTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCc-EEEEec
Confidence 145677777778885 554554
No 329
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=92.73 E-value=0.17 Score=45.26 Aligned_cols=89 Identities=17% Similarity=0.125 Sum_probs=50.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-CCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc------------
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-PGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP------------ 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-P~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~------------ 97 (306)
++|.|.|++|-.|+...+.|.+.|+++++... +...+--..++.-..++.++.+..++|++|-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~ 82 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDA 82 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--------------
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHH
Confidence 68999999999999999999999999874431 21100000111112334444432248998876432
Q ss_pred ------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 ------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 ------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..+..+++.|.+.|++ ++.+++
T Consensus 83 ~~~~n~~~~~~l~~a~~~~~~~-~v~~SS 110 (315)
T 2ydy_A 83 ASQLNVDASGNLAKEAAAVGAF-LIYISS 110 (315)
T ss_dssp -----CHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 1245677888888885 554554
No 330
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.66 E-value=0.23 Score=44.72 Aligned_cols=91 Identities=11% Similarity=0.182 Sum_probs=56.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc--ee------cCeeccC-C------HHhhhhcCCCcEEEEe
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK--TH------LDLPVFN-T------VKEARDATGAEATVIY 94 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~--~i------~Gip~y~-s------l~el~~~~~iDlavi~ 94 (306)
.++|.|.|++|-.|+...+.|.+.|++++.......... .+ .++..+. + +.++.+..++|++|-+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 368999999999999999999999999874432211000 00 1232221 2 3333332247999876
Q ss_pred cCch------------------hHHHHHHHHHHcCC-CEEEEecC
Q psy8894 95 VPPP------------------GAAKAIHEALDAEM-PLIVCITE 120 (306)
Q Consensus 95 vp~~------------------~~~~~~~e~~~~Gi-~~vvi~t~ 120 (306)
.... .+..+++.|.+.|+ +.++.+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 5421 14456778888887 67776655
No 331
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.64 E-value=0.13 Score=45.74 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=55.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCCce-ecCeec-------cCCHHhhhhcCCCcEEEEecCch--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGGKT-HLDLPV-------FNTVKEARDATGAEATVIYVPPP-- 98 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~~-i~Gip~-------y~sl~el~~~~~iDlavi~vp~~-- 98 (306)
++|.|.|++|-.|+...+.|.+. |++++... .+....+ ..++.. ..++.++.++.++|++|-+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 81 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASD-IRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSA 81 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE-SCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc-CCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCC
Confidence 57999999999999999998887 88877443 2211111 112211 12344554422599999775321
Q ss_pred ---------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ---------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ---------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 82 TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 2335677787889988775553
No 332
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=92.60 E-value=0.41 Score=43.51 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=54.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCC-CCC-cee------cCeecc-------CCHHhhhhcCCCcEEEEec
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPG-KGG-KTH------LDLPVF-------NTVKEARDATGAEATVIYV 95 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~-~~g-~~i------~Gip~y-------~sl~el~~~~~iDlavi~v 95 (306)
+|.|.|++|-.|+...+.|.+. |++++...... ... +.+ .++..+ .++.++.++.++|++|-+.
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA 81 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 6999999999999999988887 78877543211 000 111 122221 1244444312499998765
Q ss_pred Cch------------------hHHHHHHHHHHc--CCC-------EEEEecC
Q psy8894 96 PPP------------------GAAKAIHEALDA--EMP-------LIVCITE 120 (306)
Q Consensus 96 p~~------------------~~~~~~~e~~~~--Gi~-------~vvi~t~ 120 (306)
... .+..+++.|.+. +++ .++.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS 133 (361)
T 1kew_A 82 AESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST 133 (361)
T ss_dssp SCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE
T ss_pred CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCC
Confidence 321 234567778777 887 7776665
No 333
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=92.56 E-value=0.21 Score=45.84 Aligned_cols=90 Identities=11% Similarity=-0.017 Sum_probs=56.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH--cCCeEEEeeC-CC------------CCCceec--Ceec-------cCCHHhhhh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE--YGTKVVGGVS-PG------------KGGKTHL--DLPV-------FNTVKEARD 84 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~--~g~~vv~~Vn-P~------------~~g~~i~--Gip~-------y~sl~el~~ 84 (306)
+.++|.|.|++|-.|+...+.|.+ .|+++++... +. ..-.... ++.. ..+++++ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~ 87 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-E 87 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-h
Confidence 357899999999999999999999 8999875432 21 0000111 1111 1224444 1
Q ss_pred cCCCcEEEEecCc----------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 85 ATGAEATVIYVPP----------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 85 ~~~iDlavi~vp~----------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
..++|++|-+... ..+..+++.|.+.|++ ++.+++
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 1359999865431 2345677888888998 665565
No 334
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=92.54 E-value=0.31 Score=45.48 Aligned_cols=86 Identities=10% Similarity=0.030 Sum_probs=62.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc----CCeEEEeeCC-------------CCCC----------c--eecC--eeccC--
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY----GTKVVGGVSP-------------GKGG----------K--THLD--LPVFN-- 77 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~----g~~vv~~VnP-------------~~~g----------~--~i~G--ip~y~-- 77 (306)
.+|+|.|+ |+.|+...+.+.+. ++++++.-++ +..| + .+.| ++++.
T Consensus 2 ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcC
Confidence 48999999 99999999987765 6788866553 1111 1 1223 34553
Q ss_pred CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 78 TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 78 sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
+.++++- +.++|+++.+++.....+.+...++.|.|.+++
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEE
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEE
Confidence 4556652 136999999999988899999999999998775
No 335
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.48 E-value=0.62 Score=42.89 Aligned_cols=90 Identities=12% Similarity=-0.017 Sum_probs=55.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcC--CeEEEeeCCCCC-Cc--eec------Ceecc---CCHHhhhhcCCCcEEEEe
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYG--TKVVGGVSPGKG-GK--THL------DLPVF---NTVKEARDATGAEATVIY 94 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g--~~vv~~VnP~~~-g~--~i~------Gip~y---~sl~el~~~~~iDlavi~ 94 (306)
++++|+|+|++|..|......|.+.| .+++ .+|.... +. ++. .+..+ .++++... +.|+++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~-l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~--gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLH-LYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALT--GMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEE-EEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHT--TCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcC--CCCEEEEc
Confidence 35789999988999998877777777 4554 4553321 10 011 01111 13444444 49999998
Q ss_pred cC--c--------------hhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 95 VP--P--------------PGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 95 vp--~--------------~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
.+ . ..+.++++.+.+.+.+.++++.+.
T Consensus 84 ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 84 AGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 64 2 335667788888888877766654
No 336
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.39 E-value=0.25 Score=48.10 Aligned_cols=93 Identities=13% Similarity=0.014 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC-Cc-----------------------eecCeeccCCHHhhhh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG-GK-----------------------THLDLPVFNTVKEARD 84 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~-g~-----------------------~i~Gip~y~sl~el~~ 84 (306)
+.++|+|||+ |.||......+.+.|++++ .+|++.. +. ....+....+++++.
T Consensus 53 ~i~kVaVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~- 129 (460)
T 3k6j_A 53 DVNSVAIIGG-GTMGKAMAICFGLAGIETF-LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLS- 129 (460)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCT-
T ss_pred cCCEEEEECC-CHHHHHHHHHHHHCCCeEE-EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHc-
Confidence 3478999999 9999998899999999975 5665431 00 001223455665443
Q ss_pred cCCCcEEEEecCchh--HHHHHHHHHHc-CCCEEEE-ecCCCChhH
Q psy8894 85 ATGAEATVIYVPPPG--AAKAIHEALDA-EMPLIVC-ITEGIPQLD 126 (306)
Q Consensus 85 ~~~iDlavi~vp~~~--~~~~~~e~~~~-Gi~~vvi-~t~Gf~e~~ 126 (306)
+.|++|.++|... -.++++++.+. .-..+++ -|++.+-.+
T Consensus 130 --~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ 173 (460)
T 3k6j_A 130 --NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNE 173 (460)
T ss_dssp --TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH
T ss_pred --cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHH
Confidence 3899999999653 34566665542 3344442 456666443
No 337
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=92.37 E-value=0.24 Score=44.20 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=55.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee-cCeecc-------CCHHhhhhcCCCcEEEEecCch----
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH-LDLPVF-------NTVKEARDATGAEATVIYVPPP---- 98 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i-~Gip~y-------~sl~el~~~~~iDlavi~vp~~---- 98 (306)
+|.|.|++|-.|+...+.|.+.|++++.......... .. .++..+ .++.++.+..++|.++-+....
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 81 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKV 81 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchh
Confidence 6999999999999999999999999874432111001 11 122222 1233444322489988764321
Q ss_pred --------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 --------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 --------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 82 SVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 1345677788889988887665
No 338
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=92.29 E-value=0.47 Score=44.42 Aligned_cols=91 Identities=22% Similarity=0.234 Sum_probs=67.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC--------------Cc------------eecC--eeccC--
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG--------------GK------------THLD--LPVFN-- 77 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~--------------g~------------~i~G--ip~y~-- 77 (306)
.++.+|+|.|. |+.|+.+.+.+.+.++++++.-||... |. .+.| ++++.
T Consensus 5 ~~~~kvgInGF-GRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 5 ARELTVGINGF-GRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CCeeEEEEECC-ChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 34678999999 999999999888888998876666310 11 1234 34552
Q ss_pred CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEec
Q psy8894 78 TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCIT 119 (306)
Q Consensus 78 sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t 119 (306)
+.++++= +.++|+++.++......+-+...++.|.|.++|=.
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsa 126 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISA 126 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESS
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECC
Confidence 4666662 22599999999999999999999999999988633
No 339
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.22 E-value=0.44 Score=42.24 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
..+|+|+|+ |..|+.+.++|...|..-+..+|+..
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 579999999 88999999999999997666888764
No 340
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=92.00 E-value=0.37 Score=42.98 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=54.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHc--CCeEEEee-CCCCC-Cce-e-cCeeccCCHHhhhhcCCCcEEEEecCch-------
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEY--GTKVVGGV-SPGKG-GKT-H-LDLPVFNTVKEARDATGAEATVIYVPPP------- 98 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~--g~~vv~~V-nP~~~-g~~-i-~Gip~y~sl~el~~~~~iDlavi~vp~~------- 98 (306)
+|.|.|++|-.|+...+.|.+. |+++++.. ++... +.+ + .++.-..++.++.+..++|++|-+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 80 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKD 80 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccC
Confidence 4899999999999999988887 78876442 22210 000 0 1111112344554423599999775421
Q ss_pred ----------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ----------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ----------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.+..+++.|.+.|++.++.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 112 (317)
T 3ajr_A 81 PALAYKVNMNGTYNILEAAKQHRVEKVVIPST 112 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHhhhhhHHHHHHHHHHHHcCCCEEEEecC
Confidence 1345677788889988876654
No 341
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=91.95 E-value=0.21 Score=48.25 Aligned_cols=90 Identities=16% Similarity=0.180 Sum_probs=58.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCCCCCCce------------------------ecCeecc----
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSPGKGGKT------------------------HLDLPVF---- 76 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP~~~g~~------------------------i~Gip~y---- 76 (306)
.+.++|.|.|++|-.|+...+.|.+. |+++++.+-... ..+ ..++.++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES-DEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS-HHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC-cHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 45689999999999999999999888 899875543211 000 0122211
Q ss_pred ---------CCHHhhhhcCCCcEEEEecCc--------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 77 ---------NTVKEARDATGAEATVIYVPP--------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 77 ---------~sl~el~~~~~iDlavi~vp~--------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.++.++.+. +|++|-+... ..+..+++.|.+.+++.++.+++
T Consensus 150 ~~~~~gld~~~~~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAET--VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp TSGGGGCCHHHHHHHHHH--CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred CCcccCCCHHHHHHHHcC--CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 123444444 8999866422 24566788888889877776665
No 342
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.88 E-value=0.29 Score=44.51 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=52.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC--CeEEEeeCCCCCC-c----eec--------Ceec-cCCHHhhhhcCCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG--TKVVGGVSPGKGG-K----THL--------DLPV-FNTVKEARDATGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g--~~vv~~VnP~~~g-~----~i~--------Gip~-y~sl~el~~~~~iDlavi~ 94 (306)
++|+|+|+ |.+|......|.+.| .+++ .+|.+... + ++. .+.+ ..+++++ . +.|+++++
T Consensus 2 ~kI~VIGa-G~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~-~--~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAAL-A--DADVVIST 76 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGG-T--TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHh-C--CCCEEEEe
Confidence 48999997 999999888888878 4554 66654310 0 111 1233 2445333 3 38999999
Q ss_pred cCchh--------------------HHHHHHHHHHcCCCEEEE
Q psy8894 95 VPPPG--------------------AAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 95 vp~~~--------------------~~~~~~e~~~~Gi~~vvi 117 (306)
+++.. ..++++++.+...+.+++
T Consensus 77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii 119 (309)
T 1hyh_A 77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV 119 (309)
T ss_dssp CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence 99765 357777776655554443
No 343
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.87 E-value=0.4 Score=44.02 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCCc-----eecCeeccC--CHHhhh-hcCCCcEEEEe--cC
Q psy8894 28 TSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGGK-----THLDLPVFN--TVKEAR-DATGAEATVIY--VP 96 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g~-----~i~Gip~y~--sl~el~-~~~~iDlavi~--vp 96 (306)
|.+++|.|+|. |..|-. ..+.|.+.|+++. +.|.+.... +..|++++. +-+++. .. +|++|+. +|
T Consensus 2 ~~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~-~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~--~d~vV~Spgi~ 77 (326)
T 3eag_A 2 NAMKHIHIIGI-GGTFMGGLAAIAKEAGFEVS-GCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFK--ADVYVIGNVAK 77 (326)
T ss_dssp -CCCEEEEESC-CSHHHHHHHHHHHHTTCEEE-EEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCC--CSEEEECTTCC
T ss_pred CCCcEEEEEEE-CHHHHHHHHHHHHhCCCEEE-EEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCC--CCEEEECCCcC
Confidence 45789999999 888875 5678888999976 555442111 124777763 345554 33 8988875 44
Q ss_pred chhHHHHHHHHHHcCCC
Q psy8894 97 PPGAAKAIHEALDAEMP 113 (306)
Q Consensus 97 ~~~~~~~~~e~~~~Gi~ 113 (306)
++ .+.++++.++|++
T Consensus 78 ~~--~p~~~~a~~~gi~ 92 (326)
T 3eag_A 78 RG--MDVVEAILNLGLP 92 (326)
T ss_dssp TT--CHHHHHHHHTTCC
T ss_pred CC--CHHHHHHHHcCCc
Confidence 33 3345666666665
No 344
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.78 E-value=0.37 Score=44.52 Aligned_cols=87 Identities=11% Similarity=-0.018 Sum_probs=53.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCce-----e----------cCeeccCCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGKT-----H----------LDLPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~~-----i----------~Gip~y~sl~el~~~~~iDlavi 93 (306)
+++|+|+|+ |.+|......+...|+ + +..+|.+...-+ + ..+....+++++. +.|++|+
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~---~aD~VI~ 88 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQ---NSDVVII 88 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT---TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHC---CCCEEEE
Confidence 368999999 9999988777877788 7 446665531000 0 0122234564443 3899999
Q ss_pred ec--Cc--------------hhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 94 YV--PP--------------PGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 94 ~v--p~--------------~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
++ |. +...++++++.+..-+.++++.+.
T Consensus 89 avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 89 TAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred cCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 98 43 225666777777666665544443
No 345
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.74 E-value=0.35 Score=45.50 Aligned_cols=75 Identities=17% Similarity=0.103 Sum_probs=51.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHH-cCCeEEEeeC---CCC---------CCceec-----C--e------e-ccCCHHhhh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIE-YGTKVVGGVS---PGK---------GGKTHL-----D--L------P-VFNTVKEAR 83 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~-~g~~vv~~Vn---P~~---------~g~~i~-----G--i------p-~y~sl~el~ 83 (306)
++|+|+|+ |.+|......|.+ .|+++. .++ ++. .+-.+. | . . +..+++++.
T Consensus 3 mkI~ViGa-G~~G~~~a~~La~~~G~~V~-~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 3 VKVCVCGG-GNGAHTLSGLAASRDGVEVR-VLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSTTEEEE-EECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCEEE-EEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 58999999 9999988888877 488865 555 311 000000 2 1 1 344676665
Q ss_pred hcCCCcEEEEecCchhHHHHHHHHHH
Q psy8894 84 DATGAEATVIYVPPPGAAKAIHEALD 109 (306)
Q Consensus 84 ~~~~iDlavi~vp~~~~~~~~~e~~~ 109 (306)
.. .|++++++|+....++++++..
T Consensus 81 ~~--aD~Vilav~~~~~~~v~~~l~~ 104 (404)
T 3c7a_A 81 SG--ADVVILTVPAFAHEGYFQAMAP 104 (404)
T ss_dssp TT--CSEEEECSCGGGHHHHHHHHTT
T ss_pred CC--CCEEEEeCchHHHHHHHHHHHh
Confidence 54 8999999999999998888765
No 346
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=91.54 E-value=1.3 Score=41.71 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=49.7
Q ss_pred HHhhhhcCCCcEEEEecCchhHHH---HHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCceecCcc
Q psy8894 79 VKEARDATGAEATVIYVPPPGAAK---AIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGIIAPEQ 155 (306)
Q Consensus 79 l~el~~~~~iDlavi~vp~~~~~~---~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~~~~~ 155 (306)
+.+..+++++|++|...|...... .+..|++.|+.. +++++-+.-..- ++ .++++++|+.+.|-+
T Consensus 130 i~~~~~~~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~f-vN~~P~~~~~~P-~~-~el~~~~g~pi~GdD--------- 197 (367)
T 1gr0_A 130 VVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAF-VNALPVFIASDP-VW-AKKFTDARVPIVGDD--------- 197 (367)
T ss_dssp HHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHHHTCEE-EECSSCCSTTSH-HH-HHHHHHHTCEEEESS---------
T ss_pred HHHHHHHhCCcEEEEeeeCCCcCHHHHHHHHHHHcCCce-EecCCccccCCH-HH-HHHHHHcCCCEeccc---------
Confidence 333334455666655555432221 334555566663 456654433211 11 135566666666654
Q ss_pred ccccCCCCCCCCCCCEEEEecChhhH--HHHHHHHHhCCCceEEEEec
Q psy8894 156 CKIGIMPGHIHQRGCVGVVSRSGTLT--YEAVHQTTQVGLGQTLCVGI 201 (306)
Q Consensus 156 ~~~~~~~~~~~~~G~va~vSqSG~~~--~~~~~~~~~~g~g~s~~vs~ 201 (306)
+=||+|+-- ..+...+..||+.+..+.|+
T Consensus 198 -----------------~Ksq~G~T~~k~~La~~l~~rg~kv~~~~q~ 228 (367)
T 1gr0_A 198 -----------------IKSQVGATITHRVLAKLFEDRGVQLDRTMQL 228 (367)
T ss_dssp -----------------BCCSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred -----------------cccccCCChHHHHHHHHHHHcCCceeEEEEE
Confidence 125677433 22456778899988888875
No 347
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=91.44 E-value=0.65 Score=42.82 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCChHHHHHHH-HcCCeEEEee
Q psy8894 31 SKVICQGFTGKQGTFHSKQAI-EYGTKVVGGV 61 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~-~~g~~vv~~V 61 (306)
++|.|.|++|-.|+...+.|. +.|++++...
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~ 34 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 479999999999999999999 8999987543
No 348
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.38 E-value=0.18 Score=48.92 Aligned_cols=90 Identities=20% Similarity=0.114 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-----e---------cC-----------eeccCCHHhhhh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-----H---------LD-----------LPVFNTVKEARD 84 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-----i---------~G-----------ip~y~sl~el~~ 84 (306)
.++|+|+|+ |.||......+.+.|++++ .+|++...-+ + .| ..+..+++++ .
T Consensus 37 ~~kV~VIGa-G~MG~~iA~~la~~G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 113 (463)
T 1zcj_A 37 VSSVGVLGL-GTMGRGIAISFARVGISVV-AVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL-S 113 (463)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGG-T
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHH-C
Confidence 468999999 9999988889998999875 5665431000 0 01 1234556443 3
Q ss_pred cCCCcEEEEecCchhH--HHHHHHHHHc-CCCEEEE-ecCCCCh
Q psy8894 85 ATGAEATVIYVPPPGA--AKAIHEALDA-EMPLIVC-ITEGIPQ 124 (306)
Q Consensus 85 ~~~iDlavi~vp~~~~--~~~~~e~~~~-Gi~~vvi-~t~Gf~e 124 (306)
+.|++|.++|.... .++++++... .-..+++ -|++.+.
T Consensus 114 --~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~ 155 (463)
T 1zcj_A 114 --TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNV 155 (463)
T ss_dssp --TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH
T ss_pred --CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCH
Confidence 38999999997542 4455554442 2233443 2445543
No 349
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.17 E-value=0.53 Score=43.51 Aligned_cols=90 Identities=12% Similarity=-0.009 Sum_probs=56.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCC--c---ee------cC----eeccCCHHhhhhcCCCcEE
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGG--K---TH------LD----LPVFNTVKEARDATGAEAT 91 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g--~---~i------~G----ip~y~sl~el~~~~~iDla 91 (306)
.++++|+|+|+ |.+|......+...|+ + +..+|.+..- . ++ .+ +....++++.... .|++
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~--aDiV 82 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG--ADCV 82 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT--CSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC--CCEE
Confidence 34579999999 9999988888877787 7 4466554310 0 00 01 2223567644443 8999
Q ss_pred EEec--Cch-------------------hHHHHHHHHHHcCCCEEEEecCC
Q psy8894 92 VIYV--PPP-------------------GAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 92 vi~v--p~~-------------------~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
|+++ |.. ...++++++.+..-+++++..+.
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 9997 532 15667777777766666555543
No 350
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=91.07 E-value=1.4 Score=39.53 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=55.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEee-CCCCCCc-----ee---cCeecc-------CCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGV-SPGKGGK-----TH---LDLPVF-------NTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V-nP~~~g~-----~i---~Gip~y-------~sl~el~~~~~iDlavi 93 (306)
.++|.|.|++|-.|+...+.|++.|+++++.+ ++..... .+ .++..+ .++.++.+. +|+++-
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAG--CDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTT--CSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcC--CCEEEE
Confidence 36899999999999999999999999987544 3321000 00 122222 234445443 898886
Q ss_pred ecCc---------h--------hHHHHHHHHHHcC-CCEEEEecC
Q psy8894 94 YVPP---------P--------GAAKAIHEALDAE-MPLIVCITE 120 (306)
Q Consensus 94 ~vp~---------~--------~~~~~~~e~~~~G-i~~vvi~t~ 120 (306)
+..+ + .+..+++.|.+.+ ++.++..++
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS 131 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSS 131 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEec
Confidence 4311 0 1334667777775 888887665
No 351
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=90.77 E-value=0.76 Score=41.32 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=55.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---C---CeEEEeeCCCCCC--cee------cCeecc-CC------HHhhhhcCCCc
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---G---TKVVGGVSPGKGG--KTH------LDLPVF-NT------VKEARDATGAE 89 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g---~~vv~~VnP~~~g--~~i------~Gip~y-~s------l~el~~~~~iD 89 (306)
++|.|.|++|-.|+...+.|.+. | ++++........+ ..+ .++..+ -+ +.++.. ++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc--CCC
Confidence 36999999999999999999886 7 8877543221100 111 122222 12 334443 499
Q ss_pred EEEEecCc------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 90 ATVIYVPP------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 90 lavi~vp~------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
++|-+... ..+..+++.|.+.+++.++.+++
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS 127 (337)
T 1r6d_A 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVST 127 (337)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 99876542 12456778888889988876664
No 352
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=90.72 E-value=0.26 Score=46.86 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=42.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-e---ecCeec--cCCHHhhhhcCCCcEEEEecCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-T---HLDLPV--FNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~---i~Gip~--y~sl~el~~~~~iDlavi~vp~ 97 (306)
+.++|+|+|+ |.+|+...+.+...|++-|..+|+..... + ..|..+ |.++.++... .|+++.++|.
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~--aDvVi~at~~ 237 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLAR--SDVVVSATAA 237 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHT--CSEEEECCSS
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcC--CCEEEEccCC
Confidence 4689999999 99999999999999994334788763110 1 113322 2344444433 6777777654
No 353
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.55 E-value=0.23 Score=46.47 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH-cCCeEEEeeCCCCCCc-----ee---cC--eeccCCHHhhhhcCCCcEEEEecCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE-YGTKVVGGVSPGKGGK-----TH---LD--LPVFNTVKEARDATGAEATVIYVPP 97 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~-~g~~vv~~VnP~~~g~-----~i---~G--ip~y~sl~el~~~~~iDlavi~vp~ 97 (306)
+.++++|+|+ |.+|+...+.+.. .+.+.+...|+..... +. .| +..+.+++++... .|+++.+||.
T Consensus 128 ~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~--aDiVi~aTps 204 (350)
T 1x7d_A 128 NARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKG--VDIITTVTAD 204 (350)
T ss_dssp TCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTT--CSEEEECCCC
T ss_pred cCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhc--CCEEEEeccC
Confidence 4679999999 9999998887654 4666566778763111 11 15 4567889888765 9999999997
Q ss_pred hhHHHHH-HHHHHcCCCE
Q psy8894 98 PGAAKAI-HEALDAEMPL 114 (306)
Q Consensus 98 ~~~~~~~-~e~~~~Gi~~ 114 (306)
....+++ .+.++.|...
T Consensus 205 ~~~~pvl~~~~l~~G~~V 222 (350)
T 1x7d_A 205 KAYATIITPDMLEPGMHL 222 (350)
T ss_dssp SSEEEEECGGGCCTTCEE
T ss_pred CCCCceecHHHcCCCCEE
Confidence 6322222 3455666653
No 354
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.49 E-value=0.32 Score=45.80 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=62.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee------cCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH------LDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i------~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
+-++|+|+|+ |++|+...+.+.+.|.+++ ..|+.. +.+ .|.... +.+++... +.|+++.|........
T Consensus 172 ~GktV~V~G~-G~VG~~~A~~L~~~GakVv-v~D~~~--~~l~~~a~~~ga~~v-~~~~ll~~-~~DIvip~a~~~~I~~ 245 (364)
T 1leh_A 172 EGLAVSVQGL-GNVAKALCKKLNTEGAKLV-VTDVNK--AAVSAAVAEEGADAV-APNAIYGV-TCDIFAPCALGAVLND 245 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHHHCCEEC-CGGGTTTC-CCSEEEECSCSCCBST
T ss_pred CcCEEEEECc-hHHHHHHHHHHHHCCCEEE-EEcCCH--HHHHHHHHHcCCEEE-ChHHHhcc-CCcEeeccchHHHhCH
Confidence 4588999999 9999999999999999987 777754 211 133222 44555442 4899988754432211
Q ss_pred HHHHHHHcCCCEEEEecCCCCh-hHHHHHHHHHHHhcCCeEEccC
Q psy8894 103 AIHEALDAEMPLIVCITEGIPQ-LDMVKVKHRLIRQSKSRLIGPN 146 (306)
Q Consensus 103 ~~~e~~~~Gi~~vvi~t~Gf~e-~~~~~~~~~~ar~~gi~iiGPN 146 (306)
+.+...|.+.|+..+.+... ++.. ++.++.|+ ++.|.
T Consensus 246 --~~~~~lg~~iV~e~An~p~t~~ea~----~~L~~~Gi-~~~Pd 283 (364)
T 1leh_A 246 --FTIPQLKAKVIAGSADNQLKDPRHG----KYLHELGI-VYAPD 283 (364)
T ss_dssp --THHHHCCCSEECCSCSCCBSSHHHH----HHHHHHTC-EECCH
T ss_pred --HHHHhCCCcEEEeCCCCCcccHHHH----HHHHhCCC-EEecc
Confidence 12334477765543333321 1222 24567776 44563
No 355
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=90.47 E-value=0.26 Score=46.17 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCC-------------CCCC----------ce--ecC--eeccC--CHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSP-------------GKGG----------KT--HLD--LPVFN--TVK 80 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP-------------~~~g----------~~--i~G--ip~y~--sl~ 80 (306)
.+|+|.|+ |+.|+...+.+.+. ++++++.-+. +..| +. +.| ++++. +.+
T Consensus 3 ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~ 81 (342)
T 2ep7_A 3 IKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPS 81 (342)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChh
Confidence 58999999 99999999988776 8898866443 1111 11 223 34553 455
Q ss_pred hhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 81 EARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 81 el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
+++- +.++|+++.+++.....+.....++.|.+.+++
T Consensus 82 ~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvi 119 (342)
T 2ep7_A 82 QIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVII 119 (342)
T ss_dssp GCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEE
T ss_pred hCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEe
Confidence 5542 125999999999999999999999999998775
No 356
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=90.45 E-value=0.48 Score=42.82 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=53.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCC--c---ee--cCeecc-C------CHHhhhhcCCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGG--K---TH--LDLPVF-N------TVKEARDATGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g--~---~i--~Gip~y-~------sl~el~~~~~iDlavi~ 94 (306)
++|.|.|++|-.|+...+.|.+. |+++++.......+ . ++ .++..+ . ++.++.+. +|++|-+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vih~ 82 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK--ADAIVHY 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT--CSEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhc--CCEEEEC
Confidence 68999999999999999998887 88877543321100 0 11 122222 1 24444444 8999876
Q ss_pred cCch------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 95 VPPP------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 95 vp~~------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.... .+..+++.|.+.|+ .++.+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS 125 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVST 125 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecc
Confidence 5422 14556778888888 4555554
No 357
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=90.24 E-value=0.8 Score=41.24 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcC-------CeEEEeeC-CCCC----Cceec----CeeccCCHHhhhhcCCCcEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYG-------TKVVGGVS-PGKG----GKTHL----DLPVFNTVKEARDATGAEATV 92 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g-------~~vv~~Vn-P~~~----g~~i~----Gip~y~sl~el~~~~~iDlav 92 (306)
+.++|.|.|++|-.|+...+.|.+.| ++++.... +... +..+. ++.-..++.++.+ .++|++|
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vi 91 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE-ARPDVIF 91 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH-TCCSEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh-cCCCEEE
Confidence 45789999999999999999999989 67664322 2110 01111 1111223444443 2499999
Q ss_pred EecCch-----------------hHHHHHHHHHHcC-----CCEEEEecC
Q psy8894 93 IYVPPP-----------------GAAKAIHEALDAE-----MPLIVCITE 120 (306)
Q Consensus 93 i~vp~~-----------------~~~~~~~e~~~~G-----i~~vvi~t~ 120 (306)
-+.... .+..+++.|.+.+ ++.++.+++
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 765421 1234566676666 787776654
No 358
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.07 E-value=0.2 Score=51.41 Aligned_cols=92 Identities=14% Similarity=0.048 Sum_probs=56.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee--------------cC-------------eeccCCHHh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH--------------LD-------------LPVFNTVKE 81 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i--------------~G-------------ip~y~sl~e 81 (306)
+.++|+|||+ |.||......+.+.|++++ .+|++...-+- .| +....+++.
T Consensus 313 ~i~kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~ 390 (715)
T 1wdk_A 313 DVKQAAVLGA-GIMGGGIAYQSASKGTPIL-MKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGD 390 (715)
T ss_dssp CCSSEEEECC-HHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTT
T ss_pred cCCEEEEECC-ChhhHHHHHHHHhCCCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHH
Confidence 3567999999 9999998889999999975 66654310000 12 233345533
Q ss_pred hhhcCCCcEEEEecCchh--HHHHHHHHHHc-CCCEEEE-ecCCCChh
Q psy8894 82 ARDATGAEATVIYVPPPG--AAKAIHEALDA-EMPLIVC-ITEGIPQL 125 (306)
Q Consensus 82 l~~~~~iDlavi~vp~~~--~~~~~~e~~~~-Gi~~vvi-~t~Gf~e~ 125 (306)
+ .. .|++|.++|... -.++++++.+. .-..+++ .|++++.+
T Consensus 391 ~-~~--aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~ 435 (715)
T 1wdk_A 391 F-GN--VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS 435 (715)
T ss_dssp G-GG--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred H-CC--CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH
Confidence 3 33 899999999665 34555655432 2233443 46677654
No 359
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=89.87 E-value=0.55 Score=44.16 Aligned_cols=92 Identities=15% Similarity=0.192 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCCc-ee------------cCeecc-CCH------HhhhhcCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGGK-TH------------LDLPVF-NTV------KEARDATGA 88 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g~-~i------------~Gip~y-~sl------~el~~~~~i 88 (306)
.++|.|.|++|..|+...+.|.+.| ++++ .++...... ++ .++..+ -++ ..+....++
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLH-VVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEE-EEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 5789999999999999999999999 5665 454432000 00 122222 233 223332469
Q ss_pred cEEEEecCch--------------------hHHHHHHHHHHcCCCEEEEecCCC
Q psy8894 89 EATVIYVPPP--------------------GAAKAIHEALDAEMPLIVCITEGI 122 (306)
Q Consensus 89 Dlavi~vp~~--------------------~~~~~~~e~~~~Gi~~vvi~t~Gf 122 (306)
|+++-+.... .+..+++.|.+.|++.++.+|+.-
T Consensus 114 D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~~ 167 (399)
T 3nzo_A 114 DYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDK 167 (399)
T ss_dssp SEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCSC
T ss_pred CEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 9998764321 123578888899999888878743
No 360
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.83 E-value=0.25 Score=48.54 Aligned_cols=69 Identities=20% Similarity=0.151 Sum_probs=50.6
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
....++|+|+|+ |.+|+...+.++.+|++++ .+++..... .-.|.. +.+++++... .|+++++++....
T Consensus 271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Vi-v~d~~~~~~~~A~~~Ga~-~~~l~e~l~~--aDvVi~atgt~~~ 342 (494)
T 3ce6_A 271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVS-VTEIDPINALQAMMEGFD-VVTVEEAIGD--ADIVVTATGNKDI 342 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHGGG--CSEEEECSSSSCS
T ss_pred CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCE-EecHHHHHhC--CCEEEECCCCHHH
Confidence 345689999999 9999999999999999865 667653111 124655 3467777655 9999999887654
No 361
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=89.78 E-value=0.72 Score=46.49 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=57.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc----ee-----cCeecc-------CCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK----TH-----LDLPVF-------NTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~----~i-----~Gip~y-------~sl~el~~~~~iDlavi 93 (306)
.++|.|.|++|-.|+...+.|.+.|+++++......... .+ .++..+ .++.++.+..++|++|-
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih 90 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 90 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 478999999999999999999999999875432211000 00 122211 23444444224999987
Q ss_pred ecCch------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 94 YVPPP------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 94 ~vp~~------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+.... .+..+++.|.+.+++.++.+++
T Consensus 91 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 91 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 64321 2344667777789988887665
No 362
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=89.73 E-value=0.95 Score=40.69 Aligned_cols=89 Identities=12% Similarity=0.142 Sum_probs=53.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce-e------cC--eecc-C------CHHhhhhcCCCcEEEEec
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT-H------LD--LPVF-N------TVKEARDATGAEATVIYV 95 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~-i------~G--ip~y-~------sl~el~~~~~iDlavi~v 95 (306)
+|.|.|++|-.|+...+.|.+.|++++..........+ . .+ +..+ - ++.++.+..++|++|-+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A 81 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence 69999999999999999999999997744221110000 0 01 1111 1 233443323489998654
Q ss_pred Cc------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 96 PP------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 96 p~------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.. ..+..+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 31 11234566777789988877664
No 363
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=89.67 E-value=0.68 Score=40.04 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=25.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
+++.|.|+++-.|+...+.|.+.|++++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~ 30 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVG 30 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999763
No 364
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.66 E-value=1.1 Score=40.19 Aligned_cols=87 Identities=11% Similarity=0.099 Sum_probs=53.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCce---ecCeecc-CC-------HHhhhhcCCCcEEEEecCc-
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKT---HLDLPVF-NT-------VKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~---i~Gip~y-~s-------l~el~~~~~iDlavi~vp~- 97 (306)
++|.|.|++|-.|+...+.|.+. |+++++.......... ..++..+ -+ +.++.+. +|++|-+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~d~vih~A~~~ 78 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK--CDVVLPLVAIA 78 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHH--CSEEEECBCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccC--CCEEEEccccc
Confidence 47999999999999999999997 8997754332110000 1122222 12 3444444 8999875321
Q ss_pred --h---------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 98 --P---------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 98 --~---------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
. ....+++.|.+.| +.++.+++
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS 117 (345)
T 2bll_A 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 117 (345)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 1 2345677788888 66776665
No 365
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.59 E-value=0.42 Score=43.57 Aligned_cols=89 Identities=17% Similarity=0.142 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcC-CeEEEeeCCCCCCc---eecCeeccC------CHHhhhhc---CCCcEEEEecC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYG-TKVVGGVSPGKGGK---THLDLPVFN------TVKEARDA---TGAEATVIYVP 96 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g-~~vv~~VnP~~~g~---~i~Gip~y~------sl~el~~~---~~iDlavi~vp 96 (306)
.++|.|.|++|-.|+...+.|.+.| ++++....... .. .+.++.+.. +++++.+. .++|++|-+..
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS-GGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC-cchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 4789999999999999999999999 78764433221 11 111211111 23444431 04899987643
Q ss_pred ch----------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 97 PP----------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 97 ~~----------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
.. .+..+++.|.+.|+ .++.+++
T Consensus 125 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 125 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred ccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 21 24567788888888 4554554
No 366
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.58 E-value=0.35 Score=44.32 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=50.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCCCceec--------C------eecc-CCHHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKGGKTHL--------D------LPVF-NTVKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~g~~i~--------G------ip~y-~sl~el~~~~~iDlavi 93 (306)
++|+|+|+ |.+|......+.+.|+ +++ .+|.+. +... + ..+. .+.+++ . +.|++|+
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~-l~D~~~--~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~-~--~aDvVii 73 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMV-LIDVDK--KRAEGDALDLIHGTPFTRRANIYAGDYADL-K--GSDVVIV 73 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSH--HHHHHHHHHHHHHGGGSCCCEEEECCGGGG-T--TCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCCh--HHHHHHHHHHHhhhhhcCCcEEEeCCHHHh-C--CCCEEEE
Confidence 47999999 9999988888888787 654 666542 1111 1 1121 233333 2 4899999
Q ss_pred ecCchh----------------HHHHHHHHHHcCCCEEEEe
Q psy8894 94 YVPPPG----------------AAKAIHEALDAEMPLIVCI 118 (306)
Q Consensus 94 ~vp~~~----------------~~~~~~e~~~~Gi~~vvi~ 118 (306)
++|... ..++++++.+...+.+++.
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~ 114 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 998643 3566677766655554443
No 367
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.51 E-value=0.9 Score=41.06 Aligned_cols=90 Identities=12% Similarity=0.135 Sum_probs=53.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---e---cCeeccC-CHHhhhhcCCCcEEEEecCchh-
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---H---LDLPVFN-TVKEARDATGAEATVIYVPPPG- 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i---~Gip~y~-sl~el~~~~~iDlavi~vp~~~- 99 (306)
+.++|.|.|++|-.|+...+.|.+.|+++++........ .. . .++.++. ++.+-.- .++|++|-+.....
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~d~vih~A~~~~~ 104 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY-IEVDQIYHLASPASP 104 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC-CCCSEEEECCSCCSH
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhh-cCCCEEEECccccCc
Confidence 457899999999999999999999999987543211100 00 0 1222221 2222111 24899987653211
Q ss_pred -----------------HHHHHHHHHHcCCCEEEEecC
Q psy8894 100 -----------------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 100 -----------------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+..+++.|.+.|++ ++.+++
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~v~~SS 141 (343)
T 2b69_A 105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLAST 141 (343)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCc-EEEECc
Confidence 34567778788885 444453
No 368
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.39 E-value=0.35 Score=44.56 Aligned_cols=31 Identities=23% Similarity=0.448 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEee
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGV 61 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V 61 (306)
++|.|.|++|-.|+...+.|.+.|+++++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~ 59 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLI 59 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Confidence 5899999999999999999999999977543
No 369
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=89.34 E-value=0.93 Score=40.28 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=27.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEee
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGV 61 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V 61 (306)
++|.|.|++|-.|+...+.|.+.|+++++.+
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 5799999999999999999999999987554
No 370
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.17 E-value=0.34 Score=43.89 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPG 64 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~ 64 (306)
+++|+|+|+ |.+|......|...|+ +++ .++.+
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~-l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIV-LEDIA 41 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 468999999 9999988888888887 654 66654
No 371
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.04 E-value=0.98 Score=38.43 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=55.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCeecc-CC------HHhhhhcCCCcEEEEecCchh
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT---HLDLPVF-NT------VKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~---i~Gip~y-~s------l~el~~~~~iDlavi~vp~~~ 99 (306)
++|+|+|+ |+.|+...+.|.+.|++++ .++.+... ++ ..|.+++ .+ +.++.- .+.|+++++++.+.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~-vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVV-IINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEV-SKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTC-CTTCEEEECCSCHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCc-ccCCEEEEecCCcH
Confidence 36999998 9999999999999999876 55544210 11 1244332 22 223211 25899999999887
Q ss_pred HHHHHHHHHH--cCCCEEEEecC
Q psy8894 100 AAKAIHEALD--AEMPLIVCITE 120 (306)
Q Consensus 100 ~~~~~~e~~~--~Gi~~vvi~t~ 120 (306)
....+...++ .+...++.-+.
T Consensus 78 ~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 78 VNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp HHHHHHHHHHHTSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEe
Confidence 6666555554 47777765443
No 372
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=89.04 E-value=1.1 Score=40.29 Aligned_cols=89 Identities=19% Similarity=0.233 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEee-CCCCCC--c---eec----Ceec-------cCCHHhhhhcCCCcEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGV-SPGKGG--K---THL----DLPV-------FNTVKEARDATGAEATV 92 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V-nP~~~g--~---~i~----Gip~-------y~sl~el~~~~~iDlav 92 (306)
.++|.|.|++|-.|+...+.|++.|+++++.+ ++.... . ++. ++.. ..++.++.+. +|+++
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKG--CTGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTT--CSEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcC--CCEEE
Confidence 46899999999999999999999999987544 332100 0 000 1221 2234455543 89888
Q ss_pred EecCc--------h---------hHHHHHHHHHHcC-CCEEEEecC
Q psy8894 93 IYVPP--------P---------GAAKAIHEALDAE-MPLIVCITE 120 (306)
Q Consensus 93 i~vp~--------~---------~~~~~~~e~~~~G-i~~vvi~t~ 120 (306)
-+..+ . .+..+++.|.+.+ ++.++..++
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS 128 (337)
T 2c29_D 83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSS 128 (337)
T ss_dssp ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeee
Confidence 64321 0 1244667777777 888887665
No 373
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.95 E-value=0.82 Score=41.58 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=48.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCC---Cc--ee-c------Ceecc-CCHHhhhhcCCCcEEEEec
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKG---GK--TH-L------DLPVF-NTVKEARDATGAEATVIYV 95 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~---g~--~i-~------Gip~y-~sl~el~~~~~iDlavi~v 95 (306)
++|+|+|+ |.+|......+...|+ +++ .+|.+.. +. ++ . ..++. .+.+++. +.|++|+++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~-L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~---~aDvVIi~~ 75 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELV-LVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELA---DAQVVILTA 75 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGT---TCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhC---CCCEEEEcC
Confidence 47999999 9999888777777787 654 6655431 00 00 1 11222 2333332 489999998
Q ss_pred Cchh----------------HHHHHHHHHHcCCCEEEEecC
Q psy8894 96 PPPG----------------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 96 p~~~----------------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+... ..++++++.+...+.+++..+
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 76 GANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred CCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 5433 255666666666565554433
No 374
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=88.34 E-value=1.3 Score=41.24 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=64.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC--------------CCc------------eecC--eecc--CCH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK--------------GGK------------THLD--LPVF--NTV 79 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~--------------~g~------------~i~G--ip~y--~sl 79 (306)
.+|+|-|+ |+.|+.+.|.+.+. ++++++.-||.. .|. .+.| ++++ .+.
T Consensus 2 ~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp 80 (332)
T 3pym_A 2 VRVAINGF-GRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDP 80 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred eEEEEECC-CcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeeccc
Confidence 47999999 99999999977765 788887666621 011 1234 4455 356
Q ss_pred Hhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 80 KEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 80 ~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
++++- +.++|+++-++......+-+...++.|.|.+++
T Consensus 81 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViI 119 (332)
T 3pym_A 81 ANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVI 119 (332)
T ss_dssp GGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEE
T ss_pred ccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEE
Confidence 67653 236999999999999999999999999998886
No 375
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=88.32 E-value=0.64 Score=40.30 Aligned_cols=84 Identities=12% Similarity=0.094 Sum_probs=50.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCee----ccCCHHhhhhcCCCcEEEEecCch---------
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLP----VFNTVKEARDATGAEATVIYVPPP--------- 98 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip----~y~sl~el~~~~~iDlavi~vp~~--------- 98 (306)
+|.|.|++|..|+...+.|.+ |++++....... .. .+++ -..++.++.+..++|++|-+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~--~~-~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 77 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSE--IQ-GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEK 77 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSC--CT-TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCH
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCc--CC-CCceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCH
Confidence 699999999999999998885 888764432211 11 1211 111233433322489998765421
Q ss_pred ---------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 99 ---------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 99 ---------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
....+++.|.+.|++ ++.+++
T Consensus 78 ~~~~~~n~~~~~~l~~~~~~~~~~-iv~~SS 107 (273)
T 2ggs_A 78 EKAYKINAEAVRHIVRAGKVIDSY-IVHIST 107 (273)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHhCCe-EEEEec
Confidence 245677777777874 554554
No 376
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=88.26 E-value=0.22 Score=46.87 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=61.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC--------------C---------CCc--eecC--eeccC--C
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG--------------K---------GGK--THLD--LPVFN--T 78 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~--------------~---------~g~--~i~G--ip~y~--s 78 (306)
..+.+|+|.|+ |+.|+...+.+.+.++++++.-+|. + .++ .+.| ++++. +
T Consensus 19 ~~~~kVaInGf-GrIGr~vlr~l~e~~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~d 97 (356)
T 3hja_A 19 PGSMKLAINGF-GRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERD 97 (356)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred CCCeEEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 44678999999 9999999998888889987654443 0 001 1334 34554 4
Q ss_pred HHhhhh-cCCCcEEEEecCchhH----HHHHHHHHH-cCCCEEEEecC
Q psy8894 79 VKEARD-ATGAEATVIYVPPPGA----AKAIHEALD-AEMPLIVCITE 120 (306)
Q Consensus 79 l~el~~-~~~iDlavi~vp~~~~----~~~~~e~~~-~Gi~~vvi~t~ 120 (306)
.++++- +.++|+++.++..... .+-+...++ .|.+.++|=.+
T Consensus 98 p~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsap 145 (356)
T 3hja_A 98 PKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVP 145 (356)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSC
T ss_pred hhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCC
Confidence 566552 2359999998876666 666677778 89998876333
No 377
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=88.19 E-value=0.46 Score=43.70 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=54.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH-cCCeEEEeeCCCCCCc-e----e----cCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE-YGTKVVGGVSPGKGGK-T----H----LDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~-~g~~vv~~VnP~~~g~-~----i----~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
+.++++|+|+ |.+|+...+.+.+ .+.+.+...|+..... + . ..+. +.+++++. + .|+++.+||..
T Consensus 124 ~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~--aDvVi~aTp~~ 198 (322)
T 1omo_A 124 NSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-R--CDVLVTTTPSR 198 (322)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-S--SSEEEECCCCS
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-C--CCEEEEeeCCC
Confidence 4679999999 9999998888877 4677666888764111 1 1 1245 78888887 6 99999999975
Q ss_pred hHHHHH-HHHHHcCCC
Q psy8894 99 GAAKAI-HEALDAEMP 113 (306)
Q Consensus 99 ~~~~~~-~e~~~~Gi~ 113 (306)
. .++ .++++.|..
T Consensus 199 ~--pv~~~~~l~~G~~ 212 (322)
T 1omo_A 199 K--PVVKAEWVEEGTH 212 (322)
T ss_dssp S--CCBCGGGCCTTCE
T ss_pred C--ceecHHHcCCCeE
Confidence 3 333 345566654
No 378
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.90 E-value=0.97 Score=39.91 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=51.2
Q ss_pred ccccccccccccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEE
Q psy8894 12 KVAEEIYAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEAT 91 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDla 91 (306)
+-+...+...++..+..+.+++.|.|+++-.|+...+.|.+.|++++....... +... .. .+++.. ...++.
T Consensus 9 ~~~~~~~~~~~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~--~~~~--~~---~~~~~~-~~~~~~ 80 (267)
T 3u5t_A 9 SGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA--AAAE--EV---AGKIEA-AGGKAL 80 (267)
T ss_dssp ------------------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS--HHHH--HH---HHHHHH-TTCCEE
T ss_pred cccccccccccccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH--HHHH--HH---HHHHHh-cCCeEE
Confidence 334444445555555556788999999999999999999999999763323221 1110 01 111111 112222
Q ss_pred ---EEecCchhHHHHHHHHHHc--CCCEEEEecCCC
Q psy8894 92 ---VIYVPPPGAAKAIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 92 ---vi~vp~~~~~~~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
.+.+.++.+.++++++.+. ++..+++ ..|+
T Consensus 81 ~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvn-nAG~ 115 (267)
T 3u5t_A 81 TAQADVSDPAAVRRLFATAEEAFGGVDVLVN-NAGI 115 (267)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCEEEEEE-CCCC
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE-CCCC
Confidence 2345667777778777764 5776654 5554
No 379
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.85 E-value=0.61 Score=40.19 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=52.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee-cCeecc-CC---HHhhhhc--CCCcEEEEecCchhH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH-LDLPVF-NT---VKEARDA--TGAEATVIYVPPPGA 100 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i-~Gip~y-~s---l~el~~~--~~iDlavi~vp~~~~ 100 (306)
..++|+|+|+ |+.|+...+.|.+.|+ ++ .++.+...- +. .|+.++ .+ .+.+.+. .+.|+++++++.+..
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~-vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FV-LAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EE-EESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EE-EEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 3568999999 9999888898888888 55 777653100 01 344432 22 2222111 248999999988654
Q ss_pred H-HHHHHHHHcCCC-EEEEec
Q psy8894 101 A-KAIHEALDAEMP-LIVCIT 119 (306)
Q Consensus 101 ~-~~~~e~~~~Gi~-~vvi~t 119 (306)
- .++..+.+.+.+ .++.-.
T Consensus 85 n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEE
Confidence 3 344556667776 555433
No 380
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=87.76 E-value=1 Score=38.51 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=26.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGG 60 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~ 60 (306)
++|.|.|++|-.|+...+.|.+.|++++..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~ 31 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGI 31 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence 479999999999999999999999997643
No 381
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.44 E-value=0.25 Score=44.07 Aligned_cols=109 Identities=12% Similarity=0.040 Sum_probs=64.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cCeeccCCHHhhhhcCCCcEEEEecCchhHH---HHH
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LDLPVFNTVKEARDATGAEATVIYVPPPGAA---KAI 104 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~Gip~y~sl~el~~~~~iDlavi~vp~~~~~---~~~ 104 (306)
++.|+|+ |.+|+.....|.+.|.+-+..+|++... +++ .+...+.++.+..++ .|++|.++|....+ .+-
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~--aDiVInatp~gm~p~~~~i~ 186 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKK--AKSLFNTTSVGMKGEELPVS 186 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHT--CSEEEECSSTTTTSCCCSCC
T ss_pred eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcC--CCEEEECCCCCCCCCCCCCC
Confidence 8999999 9999999999999999534477776411 111 122245667676665 99999999853221 111
Q ss_pred HHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCe-EEccCCCcee
Q psy8894 105 HEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSR-LIGPNCPGII 151 (306)
Q Consensus 105 ~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~-iiGPNc~Gi~ 151 (306)
.+.+..+ ..++=+..+ +.. ++ +.|++.|.+ ++ ||.-.++
T Consensus 187 ~~~l~~~-~~V~Divy~--~T~---ll-~~A~~~G~~~~~-~Gl~MLv 226 (253)
T 3u62_A 187 DDSLKNL-SLVYDVIYF--DTP---LV-VKARKLGVKHII-KGNLMFY 226 (253)
T ss_dssp HHHHTTC-SEEEECSSS--CCH---HH-HHHHHHTCSEEE-CTHHHHH
T ss_pred HHHhCcC-CEEEEeeCC--CcH---HH-HHHHHCCCcEEE-CCHHHHH
Confidence 2334433 233334455 333 22 246778887 54 6654444
No 382
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.37 E-value=0.53 Score=48.27 Aligned_cols=91 Identities=13% Similarity=-0.072 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCce--------------ecC-------------eeccCCHHhh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKT--------------HLD-------------LPVFNTVKEA 82 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~--------------i~G-------------ip~y~sl~el 82 (306)
.++|+|||+ |.||......+.+.|++++ .+|.+...-+ -.| +....+++++
T Consensus 312 ~~kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~ 389 (725)
T 2wtb_A 312 IKKVAIIGG-GLMGSGIATALILSNYPVI-LKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESF 389 (725)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGG
T ss_pred CcEEEEEcC-CHhhHHHHHHHHhCCCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHH
Confidence 367999999 9999988889998999965 5555421000 011 2333455443
Q ss_pred hhcCCCcEEEEecCchhH--HHHHHHHHHc-CCCEEEE-ecCCCChh
Q psy8894 83 RDATGAEATVIYVPPPGA--AKAIHEALDA-EMPLIVC-ITEGIPQL 125 (306)
Q Consensus 83 ~~~~~iDlavi~vp~~~~--~~~~~e~~~~-Gi~~vvi-~t~Gf~e~ 125 (306)
. +.|++|.++|.... .+++.++.+. .-+.+++ -|++++.+
T Consensus 390 -~--~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~ 433 (725)
T 2wtb_A 390 -R--DVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN 433 (725)
T ss_dssp -T--TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred -C--CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH
Confidence 3 38999999998753 3455554432 2233432 35676544
No 383
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=87.34 E-value=0.58 Score=45.90 Aligned_cols=88 Identities=17% Similarity=0.084 Sum_probs=57.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAI 104 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~ 104 (306)
-..++|+|+|. |++|+...+.++.+|++++ ..||..... ...|..+ .+++++... .|++++++....... -
T Consensus 275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~-v~d~~~~~~~~a~~~G~~~-~~l~ell~~--aDiVi~~~~t~~lI~-~ 348 (494)
T 3d64_A 275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVW-VTEIDPICALQAAMEGYRV-VTMEYAADK--ADIFVTATGNYHVIN-H 348 (494)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSCHHHHHHHHTTTCEE-CCHHHHTTT--CSEEEECSSSSCSBC-H
T ss_pred cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCChHhHHHHHHcCCEe-CCHHHHHhc--CCEEEECCCcccccC-H
Confidence 35689999999 9999999999999999976 667653101 1135543 479898876 999999985433321 1
Q ss_pred HHHHHcCCCEEEE-ecCC
Q psy8894 105 HEALDAEMPLIVC-ITEG 121 (306)
Q Consensus 105 ~e~~~~Gi~~vvi-~t~G 121 (306)
+......-..+++ ++.|
T Consensus 349 ~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp HHHHHCCTTEEEEECSSS
T ss_pred HHHhhCCCCcEEEEcCCC
Confidence 2233344455554 4444
No 384
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.21 E-value=0.57 Score=43.71 Aligned_cols=89 Identities=18% Similarity=0.045 Sum_probs=52.9
Q ss_pred cccccCCCcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCC---Cc--eec-------CeeccCCHHhhhhcCCC
Q psy8894 23 PNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKG---GK--THL-------DLPVFNTVKEARDATGA 88 (306)
Q Consensus 23 ~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~---g~--~i~-------Gip~y~sl~el~~~~~i 88 (306)
|++.+.+.++|+|+|++|..|......+...|. +++ .+|.... |. ++. .+....+..+..+. .
T Consensus 1 ~~~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d--A 77 (343)
T 3fi9_A 1 MSLSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD--A 77 (343)
T ss_dssp -CCCCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT--E
T ss_pred CCccccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC--C
Confidence 445666678999999989999887766766665 454 6776530 10 011 11222355554443 8
Q ss_pred cEEEEecCc----------------hhHHHHHHHHHHcCCCE
Q psy8894 89 EATVIYVPP----------------PGAAKAIHEALDAEMPL 114 (306)
Q Consensus 89 Dlavi~vp~----------------~~~~~~~~e~~~~Gi~~ 114 (306)
|++|++... ....++++.+.+.+.+.
T Consensus 78 DvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a 119 (343)
T 3fi9_A 78 KYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDC 119 (343)
T ss_dssp EEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 999987422 22345566666777666
No 385
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=86.98 E-value=0.87 Score=41.25 Aligned_cols=86 Identities=10% Similarity=-0.013 Sum_probs=53.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC-----CeEEEeeCCCCCCc-eecCeecc-C------CHHhhhhcCC-CcEEEEecC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG-----TKVVGGVSPGKGGK-THLDLPVF-N------TVKEARDATG-AEATVIYVP 96 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g-----~~vv~~VnP~~~g~-~i~Gip~y-~------sl~el~~~~~-iDlavi~vp 96 (306)
++|.|.|++|-.|+...+.|.+.| +++++......... ...++..+ - ++.++.+... +|+++-+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 579999999999999999999888 88775543221001 01122222 1 2333333222 899987743
Q ss_pred c-------------hhHHHHHHHHHHc--CCCEEE
Q psy8894 97 P-------------PGAAKAIHEALDA--EMPLIV 116 (306)
Q Consensus 97 ~-------------~~~~~~~~e~~~~--Gi~~vv 116 (306)
. ..+..+++.|.+. +++.++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v 116 (364)
T 2v6g_A 82 ANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116 (364)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred CCcchHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence 2 2245667777776 788876
No 386
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=86.97 E-value=0.94 Score=42.23 Aligned_cols=87 Identities=21% Similarity=0.181 Sum_probs=63.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC------------------CC-c---------eecC--eecc--
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK------------------GG-K---------THLD--LPVF-- 76 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~------------------~g-~---------~i~G--ip~y-- 76 (306)
+.+|+|-|+ |+.|+.+.|.+.+. ++++++.-||.. .| + .+.| +++|
T Consensus 3 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECC-ChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 468999999 99999999987765 677887666621 11 0 1223 3454
Q ss_pred CCHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 77 NTVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 77 ~sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.+.++++- +.++|+++-++......+-+...++.|.|.+++
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViI 123 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI 123 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEE
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEE
Confidence 34666652 135999999999999999999999999998886
No 387
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.90 E-value=1.5 Score=39.90 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=49.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc--CCeEEEeeCCCCCCc-----ee-cC---------eeccCCHHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY--GTKVVGGVSPGKGGK-----TH-LD---------LPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~--g~~vv~~VnP~~~g~-----~i-~G---------ip~y~sl~el~~~~~iDlavi 93 (306)
++|+|+|+ |.+|......+.+. |.+++ .+|.+...- ++ .. +....+++++. +.|++++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~---~aDvVii 75 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTA---NSDIVII 75 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGT---TCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHHC---CCCEEEE
Confidence 37999999 99998877666664 67765 555543100 01 11 22234566643 3899999
Q ss_pred ecCchh----------------HHHHHHHHHHcCCCEEEEec
Q psy8894 94 YVPPPG----------------AAKAIHEALDAEMPLIVCIT 119 (306)
Q Consensus 94 ~vp~~~----------------~~~~~~e~~~~Gi~~vvi~t 119 (306)
++|... ..++++.+.+.+.+..++.-
T Consensus 76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~ 117 (310)
T 1guz_A 76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117 (310)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 986431 23555555556555544433
No 388
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=86.63 E-value=2.6 Score=36.49 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVV 58 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv 58 (306)
+.+++.|.|+++-.|+...+.|.+.|++++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~ 47 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVT 47 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE
Confidence 357899999999999999999999999976
No 389
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.60 E-value=4 Score=37.27 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCC---CCc--ee-c------CeeccC-CHHhhhhcCCCcEEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGK---GGK--TH-L------DLPVFN-TVKEARDATGAEATVI 93 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~---~g~--~i-~------Gip~y~-sl~el~~~~~iDlavi 93 (306)
++.+|+|+|+ |..|....-.+...+. +++ .+|.+. .|. ++ . ...+.. +.+++. +.|++|+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~-L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~---~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELV-LIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVK---DCDVIVV 80 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEE-EECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGT---TCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhC---CCCEEEE
Confidence 4679999999 8888776656666665 554 555432 110 01 1 122222 223332 4899999
Q ss_pred ecCchh----------------HHHHHHHHHHcCCCEEEEecC
Q psy8894 94 YVPPPG----------------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 94 ~vp~~~----------------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+++... ..++++++.+...+++++..+
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 877544 456777777766666665543
No 390
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=86.46 E-value=1.6 Score=40.50 Aligned_cols=116 Identities=10% Similarity=0.026 Sum_probs=65.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccC-----------CHHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFN-----------TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~-----------sl~el~~~~~iDlavi~vp~~ 98 (306)
..+|+|+|+ |-.|..+.++|...|..-+..+|+......-.+-..|- .+.+...+..|++-+...+..
T Consensus 36 ~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 114 (346)
T 1y8q_A 36 ASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTED 114 (346)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecc
Confidence 578999999 88899999999999997666888765322111111111 111111222355555444432
Q ss_pred hHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEccCCCcee
Q psy8894 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGII 151 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGPNc~Gi~ 151 (306)
... ..++.. .+...|+. +.. +.+ ....+.++|+++++.++--.+.|+.
T Consensus 115 ~~~-~~~~~~-~~~dvVv~-~~d-~~~-~r~~ln~~~~~~~ip~i~~~~~G~~ 162 (346)
T 1y8q_A 115 IEK-KPESFF-TQFDAVCL-TCC-SRD-VIVKVDQICHKNSIKFFTGDVFGYH 162 (346)
T ss_dssp GGG-CCHHHH-TTCSEEEE-ESC-CHH-HHHHHHHHHHHTTCEEEEEEEEBTE
T ss_pred cCc-chHHHh-cCCCEEEE-cCC-CHH-HHHHHHHHHHHcCCCEEEEeecccE
Confidence 211 122332 46776664 332 222 2334456889999988866666654
No 391
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=86.40 E-value=2.9 Score=40.44 Aligned_cols=108 Identities=13% Similarity=0.180 Sum_probs=68.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe-------eCCCCCCc-ee--------------------cCeeccCCHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG-------VSPGKGGK-TH--------------------LDLPVFNTVK 80 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~-------VnP~~~g~-~i--------------------~Gip~y~sl~ 80 (306)
+-++|+|.|. |+.|....+.|.+.|.++|+. +||+..-. ++ .|...++ -+
T Consensus 234 ~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~-~~ 311 (450)
T 4fcc_A 234 EGMRVSVSGS-GNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE-GQ 311 (450)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE-TC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec-Cc
Confidence 3689999998 999999999999999998864 45542100 00 0111111 11
Q ss_pred hhhhcCCCcEEEEe-cCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 81 EARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 81 el~~~~~iDlavi~-vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
++-. .++|+++=| +...-..+.++.+.+.|++.|+-.+-+....+..+ +-+++|+.++
T Consensus 312 ~i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~----iL~~rGIl~~ 370 (450)
T 4fcc_A 312 QPWS-VPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATE----LFQQAGVLFA 370 (450)
T ss_dssp CGGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHH----HHHHTTCEEE
T ss_pred cccc-CCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHH----HHHHCCCEEE
Confidence 1211 258999877 55566678889999999998775555554444433 3467776554
No 392
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=86.37 E-value=0.48 Score=44.58 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=28.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEee
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGV 61 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V 61 (306)
.+.++|.|.|++|-.|+.+.+.|.+.|+++++.+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 100 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFI 100 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEE
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEE
Confidence 3457899999999999999999988899877554
No 393
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.27 E-value=0.52 Score=41.80 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=53.6
Q ss_pred ccccccccccccccc----cCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCC
Q psy8894 12 KVAEEIYAATRPNLR----LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATG 87 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~----~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~ 87 (306)
.++++.|....++.+ -.+.+++.|.|+++-+|+...+.|.+.|++++....... +.. -...+++.+. +
T Consensus 9 ~~~~~~~~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~-----~~~~~~l~~~-~ 80 (271)
T 3v2g_A 9 SGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA--ERA-----QAVVSEIEQA-G 80 (271)
T ss_dssp -----------CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHH-----HHHHHHHHHT-T
T ss_pred ccccccccccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH--HHH-----HHHHHHHHhc-C
Confidence 455666665554322 234578999999999999999999999999763322221 110 0111222211 1
Q ss_pred CcEE---EEecCchhHHHHHHHHHHc--CCCEEEEecCCC
Q psy8894 88 AEAT---VIYVPPPGAAKAIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 88 iDla---vi~vp~~~~~~~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
.++. .+.+-++.+.++++++.+. ++..+++ ..|.
T Consensus 81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn-nAg~ 119 (271)
T 3v2g_A 81 GRAVAIRADNRDAEAIEQAIRETVEALGGLDILVN-SAGI 119 (271)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE-CCCC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEE-CCCC
Confidence 2322 2345667777777777764 6887765 5554
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.13 E-value=0.63 Score=44.44 Aligned_cols=81 Identities=19% Similarity=0.281 Sum_probs=51.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c--eecCeecc-CC------HHhhhhcCCCcEEEEecCchh
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K--THLDLPVF-NT------VKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~--~i~Gip~y-~s------l~el~~~~~iDlavi~vp~~~ 99 (306)
..+|+|+|+ |+.|+.+.+.|.+.|++++ .|+.+... + .-.|++++ .+ |.++.- .+.|++|++++...
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vv-vId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi-~~A~~viv~~~~~~ 80 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMV-VLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDDPQ 80 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTT-TTCSEEEECCSSHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCC-CccCEEEECCCChH
Confidence 457999999 9999999999999999976 55554300 0 12366655 22 333311 24899999998754
Q ss_pred H-HHHHHHHHHcCCC
Q psy8894 100 A-AKAIHEALDAEMP 113 (306)
Q Consensus 100 ~-~~~~~e~~~~Gi~ 113 (306)
. ..++..+.+.+.+
T Consensus 81 ~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 81 TNLQLTEMVKEHFPH 95 (413)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 4 3344555555544
No 395
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.88 E-value=0.61 Score=41.45 Aligned_cols=87 Identities=16% Similarity=0.220 Sum_probs=51.7
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHH
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAK 102 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~ 102 (306)
.+.+.+++.|.|+++-+|+...+.|.+.|++++ .++.+. +.. -...+++.+. ..++.. +.+.++.+.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~ 90 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVY-GCARDA--KNV-----SAAVDGLRAA-GHDVDGSSCDVTSTDEVHA 90 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHTT-TCCEEEEECCTTCHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHH-----HHHHHHHHhc-CCcEEEEECCCCCHHHHHH
Confidence 344578899999999999999999999999976 444332 111 1112223221 223322 3456677777
Q ss_pred HHHHHHHc--CCCEEEEecCCC
Q psy8894 103 AIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 103 ~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
.++++.+. ++..+++ ..|.
T Consensus 91 ~~~~~~~~~g~id~lv~-nAg~ 111 (279)
T 3sju_A 91 AVAAAVERFGPIGILVN-SAGR 111 (279)
T ss_dssp HHHHHHHHHCSCCEEEE-CCCC
T ss_pred HHHHHHHHcCCCcEEEE-CCCC
Confidence 77777764 6887665 5555
No 396
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=85.82 E-value=1.6 Score=40.12 Aligned_cols=89 Identities=8% Similarity=-0.068 Sum_probs=54.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC-------eEEEeeCCC----C---CC----------ceecCeeccCCHHhhhh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT-------KVVGGVSPG----K---GG----------KTHLDLPVFNTVKEARD 84 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~-------~vv~~VnP~----~---~g----------~~i~Gip~y~sl~el~~ 84 (306)
++++|+|+|++|..|+.....|...|+ +++ .+|.. . .+ .....+....++.+..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~-l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQ-LLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEE-EEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 468999999999999887777766664 444 56654 1 00 01112333355655554
Q ss_pred cCCCcEEEEecCc----------------hhHHHHHHHHHHcC-CCEEEEecC
Q psy8894 85 ATGAEATVIYVPP----------------PGAAKAIHEALDAE-MPLIVCITE 120 (306)
Q Consensus 85 ~~~iDlavi~vp~----------------~~~~~~~~e~~~~G-i~~vvi~t~ 120 (306)
. .|+++++... ....++++.+.+.+ .++.+++.+
T Consensus 83 ~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 83 D--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 3 8999986431 12456778888885 774444443
No 397
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=85.46 E-value=1.4 Score=38.58 Aligned_cols=88 Identities=17% Similarity=0.158 Sum_probs=52.5
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHH
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAK 102 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~ 102 (306)
.+.+.+++.|.|+++..|+...+.|.+.|++++.....+. +... .. .+++.+. ..++.. +.+..+.+..
T Consensus 22 ~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~--~~~~--~~---~~~~~~~-~~~~~~~~~Dl~~~~~v~~ 93 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR--EAAD--AV---VAAITES-GGEAVAIPGDVGNAADIAA 93 (272)
T ss_dssp --CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHH--HH---HHHHHHT-TCEEEEEECCTTCHHHHHH
T ss_pred hccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh--hHHH--HH---HHHHHhc-CCcEEEEEcCCCCHHHHHH
Confidence 3445678999999999999999999999999753334332 1110 01 1122211 123322 3455666777
Q ss_pred HHHHHHHc--CCCEEEEecCCC
Q psy8894 103 AIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 103 ~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
+++++.+. ++..+++ ..|+
T Consensus 94 ~~~~~~~~~g~id~li~-nAg~ 114 (272)
T 4e3z_A 94 MFSAVDRQFGRLDGLVN-NAGI 114 (272)
T ss_dssp HHHHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHHhCCCCCEEEE-CCCC
Confidence 77777664 6887665 5554
No 398
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.41 E-value=5.4 Score=36.22 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=53.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCC--Cce--e-----cCeeccCCHHhhhhcCCCcEEEEecCc-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKG--GKT--H-----LDLPVFNTVKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~--g~~--i-----~Gip~y~sl~el~~~~~iDlavi~vp~- 97 (306)
.++|+|+|+ |.+|......+...|+ +++ .+|.+.. +.. + ..+..+.+++++. +.|++|++...
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~-L~Di~~~~~g~a~dl~~~~~~~i~~t~d~~~l~---~aD~Vi~aag~~ 88 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLV-LLDLSEGTKGATMDLEIFNLPNVEISKDLSASA---HSKVVIFTVNSL 88 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECCC-----CHHHHHHHTCTTEEEESCGGGGT---TCSEEEECCCC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEcCCcchHHHHHHHhhhcCCCeEEeCCHHHHC---CCCEEEEcCCCC
Confidence 368999998 9888877666666666 554 6555431 110 0 1344445665554 38999998622
Q ss_pred --------------hhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 98 --------------PGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 98 --------------~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
+...++++++.+...++++++.+.
T Consensus 89 ~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 89 GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 225567777777666766555544
No 399
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=85.26 E-value=8.7 Score=36.79 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=39.8
Q ss_pred CCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCCc----eecCeeccC--CHHhhhhcCCCcEEEEe
Q psy8894 28 TSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGGK----THLDLPVFN--TVKEARDATGAEATVIY 94 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip~y~--sl~el~~~~~iDlavi~ 94 (306)
++.++|.|+|. |..|.. ..+.|.+.|+++. +.|-+.... +..|++++. +.+.+ . +.|++|+.
T Consensus 16 ~~~~~i~viG~-G~sG~s~~A~~l~~~G~~V~-~~D~~~~~~~~~l~~~gi~~~~g~~~~~~-~--~a~~vv~s 84 (475)
T 1p3d_A 16 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQIS-GSDIADGVVTQRLAQAGAKIYIGHAEEHI-E--GASVVVVS 84 (475)
T ss_dssp TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEE-EEESCCSHHHHHHHHTTCEEEESCCGGGG-T--TCSEEEEC
T ss_pred ccCCEEEEEee-cHHHHHHHHHHHHhCCCEEE-EECCCCCHHHHHHHhCCCEEECCCCHHHc-C--CCCEEEEC
Confidence 45678999999 999986 6788888899876 555432100 124666652 22333 2 37887764
No 400
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=85.14 E-value=1.7 Score=38.91 Aligned_cols=88 Identities=16% Similarity=0.131 Sum_probs=52.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC--CeEEEeeCCCCCC--cee------cCeecc-CC------HHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG--TKVVGGVSPGKGG--KTH------LDLPVF-NT------VKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g--~~vv~~VnP~~~g--~~i------~Gip~y-~s------l~el~~~~~iDlavi 93 (306)
++|.|.|++|-.|+...+.|.+.| ++++........+ +.+ .++..+ -+ +.++.. ++|++|-
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih 81 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR--KVDGVVH 81 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh--CCCEEEE
Confidence 579999999999999999988875 8876443211000 111 122222 12 344443 4999987
Q ss_pred ecCch------------------hHHHHHHHHHHcCC-CEEEEecC
Q psy8894 94 YVPPP------------------GAAKAIHEALDAEM-PLIVCITE 120 (306)
Q Consensus 94 ~vp~~------------------~~~~~~~e~~~~Gi-~~vvi~t~ 120 (306)
+.... .+..+++.|.+.+. +.++.+++
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 65431 23456777777775 56666664
No 401
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=85.03 E-value=0.69 Score=45.18 Aligned_cols=67 Identities=16% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
-..++|+|+|. |++|+...+.++.+|++++ ..||..... .-.|+.+ .+++++... .|++++++....
T Consensus 255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Vi-v~d~~~~~~~~a~~~g~~~-~~l~ell~~--aDiVi~~~~t~~ 324 (479)
T 1v8b_A 255 ISGKIVVICGY-GDVGKGCASSMKGLGARVY-ITEIDPICAIQAVMEGFNV-VTLDEIVDK--GDFFITCTGNVD 324 (479)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSCHHHHHHHHTTTCEE-CCHHHHTTT--CSEEEECCSSSS
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCcCEEE-EEeCChhhHHHHHHcCCEe-cCHHHHHhc--CCEEEECCChhh
Confidence 35689999998 9999999999999999976 677664111 1235543 479888876 999999864433
No 402
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.00 E-value=2 Score=39.45 Aligned_cols=86 Identities=13% Similarity=0.065 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCc-----eec--------C--eeccCCHHhhhhcCCCcEEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGK-----THL--------D--LPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~-----~i~--------G--ip~y~sl~el~~~~~iDlavi 93 (306)
.++|+|+|+ |.+|......+...|+ + +..+|.+...- ++. . +....+++++. +.|++|+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~---~aD~Vi~ 78 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLA---GADVVIV 78 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGT---TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhC---CCCEEEE
Confidence 468999999 9999887777777787 7 45766543100 010 1 22224564443 3899999
Q ss_pred ec--Cch-------------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 94 YV--PPP-------------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 94 ~v--p~~-------------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
++ |.. ...++.+++.+..-++++++.+
T Consensus 79 a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 79 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred eCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 97 421 3455666666666665554443
No 403
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.86 E-value=2.4 Score=38.14 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=61.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc-ee--cCeeccCCHHhhhhcCCCcEEEEecCchhH------
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK-TH--LDLPVFNTVKEARDATGAEATVIYVPPPGA------ 100 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~-~i--~Gip~y~sl~el~~~~~iDlavi~vp~~~~------ 100 (306)
.+++.|+|+ |.+|+.....|.+.|.++ ..+|+..... ++ .|+.+. +++++. +.|++|-+||....
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v-~V~nRt~~ka~~la~~~~~~~-~~~~l~---~~DiVInaTp~Gm~~~~~l~ 191 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQV-SVLNRSSRGLDFFQRLGCDCF-MEPPKS---AFDLIINATSASLHNELPLN 191 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEE-EEECSSCTTHHHHHHHTCEEE-SSCCSS---CCSEEEECCTTCCCCSCSSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEE-EEEeCCHHHHHHHHHCCCeEe-cHHHhc---cCCEEEEcccCCCCCCCCCC
Confidence 679999999 999999999999999554 4788765211 11 133322 244554 38999999886422
Q ss_pred HHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 101 AKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 101 ~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.+.+.+.+..+. .++=+.... ++. ++ +.|++.|.+++
T Consensus 192 ~~~l~~~l~~~~-~v~D~vY~P-~T~---ll-~~A~~~G~~~~ 228 (269)
T 3phh_A 192 KEVLKGYFKEGK-LAYDLAYGF-LTP---FL-SLAKELKTPFQ 228 (269)
T ss_dssp HHHHHHHHHHCS-EEEESCCSS-CCH---HH-HHHHHTTCCEE
T ss_pred hHHHHhhCCCCC-EEEEeCCCC-chH---HH-HHHHHCcCEEE
Confidence 233333444432 233244443 333 33 35788888766
No 404
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=84.77 E-value=4.4 Score=37.59 Aligned_cols=80 Identities=13% Similarity=0.139 Sum_probs=48.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC--ceecC---eeccCC---HHhhhhcCCCcEEEEecCchh
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG--KTHLD---LPVFNT---VKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g--~~i~G---ip~y~s---l~el~~~~~iDlavi~vp~~~ 99 (306)
.+.++|+|+|. |..|+...+.+++.|++++ .+||.... ..+.. ..-|.+ +.++.+. +|++... ....
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi-~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~--~dvI~~~-~e~~ 86 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIA-VLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEI--SDVVTYE-FENI 86 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHT--CSEEEES-CCCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEE-EEeCCCCCchHHhCCceEecCcCCHHHHHHHHHh--CCEeeec-cccc
Confidence 35679999998 8888888999999999976 56664311 11111 123334 4455544 7876432 2233
Q ss_pred HHHHHHHHHHcCC
Q psy8894 100 AAKAIHEALDAEM 112 (306)
Q Consensus 100 ~~~~~~e~~~~Gi 112 (306)
..+.++.+.+.|+
T Consensus 87 ~~~~~~~l~~~g~ 99 (389)
T 3q2o_A 87 DYRCLQWLEKHAY 99 (389)
T ss_dssp CHHHHHHHHHHSC
T ss_pred cHHHHHHHHhhCc
Confidence 4455666666653
No 405
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.75 E-value=1.2 Score=38.88 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=28.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
.+.++|.|||+ |+.|..-.+.|++.|.++. .|+|..
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~Vt-Vvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAIT-VVAPTV 64 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCCCEE-EECSSC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCC
Confidence 44688999999 7777777788999998875 788864
No 406
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=84.63 E-value=0.41 Score=43.35 Aligned_cols=69 Identities=7% Similarity=0.052 Sum_probs=44.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee-cCee--ccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH-LDLP--VFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i-~Gip--~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
+.+++.|+|+ |.+|+.....|.+.|++.+..+|++... +++ ..+. .|.++.++..+ .|++|-+||....
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~--aDiVInaTp~Gm~ 188 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDE--FDIIINTTPAGMN 188 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGG--CSEEEECCC----
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcC--CCEEEECccCCCC
Confidence 3578999999 8899999999999999533477776411 111 1222 24445554444 8999999987543
No 407
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.58 E-value=1.5 Score=42.06 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC--Cc-----eecCeeccCC--HHhhhhcCCCcEEEEe--cCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG--GK-----THLDLPVFNT--VKEARDATGAEATVIY--VPP 97 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~--g~-----~i~Gip~y~s--l~el~~~~~iDlavi~--vp~ 97 (306)
+.++|.|+|. |..|....+.|.+.|+++. +.|.+.. .. +-.|++++.. -+++.+. ++|++|+. +|+
T Consensus 8 ~~k~v~viG~-G~sG~s~A~~l~~~G~~V~-~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~-~~d~vv~spgi~~ 84 (451)
T 3lk7_A 8 ENKKVLVLGL-ARSGEAAARLLAKLGAIVT-VNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDE-DFCYMIKNPGIPY 84 (451)
T ss_dssp TTCEEEEECC-TTTHHHHHHHHHHTTCEEE-EEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGS-CEEEEEECTTSCT
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEE-EEeCCcccCChHHHHHHhCCCEEEECCChHHhhcC-CCCEEEECCcCCC
Confidence 4689999999 9999888899999999976 5555320 00 1247776631 2233221 27988875 443
Q ss_pred hhHHHHHHHHHHcCCC
Q psy8894 98 PGAAKAIHEALDAEMP 113 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~ 113 (306)
+ -+.+.++.++|++
T Consensus 85 ~--~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 85 N--NPMVKKALEKQIP 98 (451)
T ss_dssp T--SHHHHHHHHTTCC
T ss_pred C--ChhHHHHHHCCCc
Confidence 3 3346777777766
No 408
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=84.49 E-value=2.3 Score=39.07 Aligned_cols=32 Identities=19% Similarity=0.036 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG 60 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~ 60 (306)
+..+|.|.|++|-.|+...+.|.+.|+++++.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~ 41 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIV 41 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEE
Confidence 45789999999999999999999999997744
No 409
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=84.38 E-value=1.5 Score=40.74 Aligned_cols=86 Identities=16% Similarity=0.118 Sum_probs=62.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHc---CCeEEEeeCCCCC-------------C----------c--eecC--eecc--CC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEY---GTKVVGGVSPGKG-------------G----------K--THLD--LPVF--NT 78 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~---g~~vv~~VnP~~~-------------g----------~--~i~G--ip~y--~s 78 (306)
.+|+|-|+ |+.|+.+.|.+.+. ++++++.-||... | + .+.| ++++ .+
T Consensus 3 ~kv~INGf-GrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 81 (335)
T 3doc_A 3 VRVAINGF-GRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVRN 81 (335)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECCSS
T ss_pred EEEEEECC-CcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEeecc
Confidence 58999999 99999999877765 5678866555210 1 0 1223 3455 24
Q ss_pred HHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 79 VKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 79 l~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.++++- +.++|+++-++......+-+...++.|.|.+++
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViI 121 (335)
T 3doc_A 82 PAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIV 121 (335)
T ss_dssp TTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred cccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEE
Confidence 566652 236999999999999999999999999998886
No 410
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.21 E-value=0.33 Score=45.69 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
++++|+|+|+ |.+|+...+.++..|++++ .+|++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~-~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVT-VLDIN 200 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCC
Confidence 4789999999 9999999999999999865 66665
No 411
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=84.13 E-value=2.4 Score=41.22 Aligned_cols=117 Identities=10% Similarity=0.078 Sum_probs=69.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEee-------CCCCCCc-ee-----------cCeeccC---------CHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGV-------SPGKGGK-TH-----------LDLPVFN---------TVK 80 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V-------nP~~~g~-~i-----------~Gip~y~---------sl~ 80 (306)
+.++|+|.|. |+.|....+.|.+.|.++|+.. ||+..-. ++ ..+.-|. +-+
T Consensus 251 ~g~~vaVqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~ 329 (470)
T 2bma_A 251 EKQTAVVSGS-GNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNE 329 (470)
T ss_dssp GGCEEEEECS-SHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCc
Confidence 3579999998 9999999999999999988654 4542100 11 0111111 001
Q ss_pred hhhhcCCCcEEEEec-CchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEcc----CCCceec
Q psy8894 81 EARDATGAEATVIYV-PPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGP----NCPGIIA 152 (306)
Q Consensus 81 el~~~~~iDlavi~v-p~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGP----Nc~Gi~~ 152 (306)
++-. .++|+++=|. +..-..+.++.+++.+++.|+=.+-++...+..+ +-+++|+.++ | |+-|++.
T Consensus 330 ~~~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~----~L~~rGIl~~-PD~~aNAGGV~~ 400 (470)
T 2bma_A 330 KPWG-VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAIN----LFKSNNIIYC-PSKAANAGGVAI 400 (470)
T ss_dssp CTTS-SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHH----HHHHTTCEEE-CHHHHTTHHHHH
T ss_pred Ceee-cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHH----HHHHCCcEEE-ChHHhhCCCcee
Confidence 2222 2589998764 4455577788888889997654444443333332 4467787554 5 4445544
No 412
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.13 E-value=2.3 Score=39.62 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
..+|+|+|+ |..|..+.++|...|..-+..||+..
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 578999999 88999999999999987666888764
No 413
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.11 E-value=1.9 Score=39.24 Aligned_cols=111 Identities=8% Similarity=0.061 Sum_probs=62.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccC----------CHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFN----------TVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~----------sl~el~~~~~iDlavi~vp~~ 98 (306)
+..+|+|+|+ |-.|..+.++|...|..-+..||+......-..-..|. ...+-..+..|++-|...+..
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~ 113 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN 113 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence 3578999999 88999999999999987666888765221111101121 111211222466666655543
Q ss_pred hH-HHHHHHHHH----------cCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 99 GA-AKAIHEALD----------AEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 99 ~~-~~~~~e~~~----------~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
.. .+.+++..+ .+...|+..+..| +...++.++|.+.++.++
T Consensus 114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~---~~R~~in~~c~~~~~Pli 166 (292)
T 3h8v_A 114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF---EARMTINTACNELGQTWM 166 (292)
T ss_dssp TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH---HHHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHHhhhhcccccccCCCCCEEEECCcch---hhhhHHHHHHHHhCCCEE
Confidence 32 244444442 5778766544443 223344467888887665
No 414
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=83.95 E-value=2.3 Score=38.66 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=51.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCc-----ee-c-------C--eeccCCHHhhhhcCCCcEEEEe
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGK-----TH-L-------D--LPVFNTVKEARDATGAEATVIY 94 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~-----~i-~-------G--ip~y~sl~el~~~~~iDlavi~ 94 (306)
++|+|+|+ |.+|......+...|. + +..+|.+...- ++ . . +..+.+.+++. +.|++|++
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~---~aD~Vi~a 77 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTA---NSDVIVVT 77 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGT---TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHC---CCCEEEEc
Confidence 58999999 9999887777777775 7 55777553100 00 0 1 12224564443 38999998
Q ss_pred cCch----------------hHHHHHHHHHHcCCCEEEEecCC
Q psy8894 95 VPPP----------------GAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 95 vp~~----------------~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
++.. ...++.+++.+.+.+.++++.+.
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 6432 22345566666677766655543
No 415
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=83.94 E-value=2.1 Score=39.85 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=62.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCC-------------CCc------------eecC--eecc--CCH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGK-------------GGK------------THLD--LPVF--NTV 79 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~-------------~g~------------~i~G--ip~y--~sl 79 (306)
+.+|+|-|+ |+.|+.+.+.+.+. ++++++.-|... .|. .+.| +++| .+.
T Consensus 4 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAINGF-GRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 358999999 99999999877765 677775433210 010 1234 4555 356
Q ss_pred Hhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 80 KEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 80 ~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
++++- +.++|+++.++......+-+...++.|.|.+++
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViI 121 (338)
T 3lvf_P 83 SKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 121 (338)
T ss_dssp GGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred ccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEE
Confidence 77663 236999999999999999999999999998886
No 416
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=83.62 E-value=2.7 Score=38.25 Aligned_cols=89 Identities=10% Similarity=0.002 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCC-------eEEEeeCCCC-----CCc--ee--------cCeeccCCHHhhhhc
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGT-------KVVGGVSPGK-----GGK--TH--------LDLPVFNTVKEARDA 85 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~-------~vv~~VnP~~-----~g~--~i--------~Gip~y~sl~el~~~ 85 (306)
.++++|+|+|++|..|+.....|.+.|+ +++ .+|... .+. ++ .++....++.+..+
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~-l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~- 79 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQ-LLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK- 79 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEE-EEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC-
Confidence 3567899999999999988888887776 554 565431 010 11 12222344555544
Q ss_pred CCCcEEEEecCc----------------hhHHHHHHHHHHcC-CC-EEEEec
Q psy8894 86 TGAEATVIYVPP----------------PGAAKAIHEALDAE-MP-LIVCIT 119 (306)
Q Consensus 86 ~~iDlavi~vp~----------------~~~~~~~~e~~~~G-i~-~vvi~t 119 (306)
++|+++.+... ..+..+++.+.+.+ .+ .++++|
T Consensus 80 -~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~s 130 (327)
T 1y7t_A 80 -DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (327)
T ss_dssp -TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 49999986321 12344667777776 65 444444
No 417
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.52 E-value=1.6 Score=42.12 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=24.5
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG 60 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~ 60 (306)
-++..+|+|||. |..|-...-.|.+.|+++++.
T Consensus 18 ~~~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~ 50 (444)
T 3vtf_A 18 GSHMASLSVLGL-GYVGVVHAVGFALLGHRVVGY 50 (444)
T ss_dssp TCCCCEEEEECC-SHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEE
Confidence 345678999998 777755566777789998843
No 418
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=83.37 E-value=12 Score=34.93 Aligned_cols=31 Identities=19% Similarity=0.080 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
.+.++++|+|. ++....+.+..++.|++++.
T Consensus 3 ~~~k~l~Il~~-~~~~~~i~~aa~~lG~~vv~ 33 (425)
T 3vot_A 3 KRNKNLAIICQ-NKHLPFIFEEAERLGLKVTF 33 (425)
T ss_dssp CCCCEEEEECC-CTTCCHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEECC-ChhHHHHHHHHHHCCCEEEE
Confidence 46789999998 67777889999999999763
No 419
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=83.36 E-value=0.67 Score=45.01 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=58.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe-eCCCCCC-ceecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG-VSPGKGG-KTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIH 105 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~-VnP~~~g-~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~ 105 (306)
-.-++++|+|+ |+.|+...+.++.+|.+++.. ++|...- ....|+.+ .+++++... .|+++.+++...... -+
T Consensus 245 L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~~--ADIVv~atgt~~lI~-~e 319 (464)
T 3n58_A 245 MAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAAST--ADIVVTTTGNKDVIT-ID 319 (464)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGGG--CSEEEECCSSSSSBC-HH
T ss_pred ccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHhh--CCEEEECCCCccccC-HH
Confidence 34589999999 999999999999999997632 4553200 01245554 468888876 999998775433211 13
Q ss_pred HHHHcCCCEEEEecCCCC
Q psy8894 106 EALDAEMPLIVCITEGIP 123 (306)
Q Consensus 106 e~~~~Gi~~vvi~t~Gf~ 123 (306)
......-.++++-+..+.
T Consensus 320 ~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 320 HMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp HHHHSCTTEEEEECSSST
T ss_pred HHhcCCCCeEEEEcCCCC
Confidence 333455566665455443
No 420
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=83.31 E-value=0.93 Score=43.72 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCc---eecCeeccCCHHhhhhcCCCcEEEEecCchhHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGK---THLDLPVFNTVKEARDATGAEATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~---~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~~~~e 106 (306)
-++|+|+|+ |+.|+...+.++.+|++++ ..+|..... ...|.. +.+++++... .|+++++........ -+.
T Consensus 211 GktVgIiG~-G~IG~~vA~~Lka~Ga~Vi-v~D~~p~~a~~A~~~G~~-~~sL~eal~~--ADVVilt~gt~~iI~-~e~ 284 (436)
T 3h9u_A 211 GKTACVCGY-GDVGKGCAAALRGFGARVV-VTEVDPINALQAAMEGYQ-VLLVEDVVEE--AHIFVTTTGNDDIIT-SEH 284 (436)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHTTT--CSEEEECSSCSCSBC-TTT
T ss_pred CCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCChhhhHHHHHhCCe-ecCHHHHHhh--CCEEEECCCCcCccC-HHH
Confidence 578999999 9999999999999999976 566642101 123544 3479999876 999998765443322 112
Q ss_pred HHHcCCCEEEE
Q psy8894 107 ALDAEMPLIVC 117 (306)
Q Consensus 107 ~~~~Gi~~vvi 117 (306)
.....-..+++
T Consensus 285 l~~MK~gAIVI 295 (436)
T 3h9u_A 285 FPRMRDDAIVC 295 (436)
T ss_dssp GGGCCTTEEEE
T ss_pred HhhcCCCcEEE
Confidence 22334455554
No 421
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=83.27 E-value=1.3 Score=40.73 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH-cCCeEEEeeCCCCCCcee-------cCee--ccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE-YGTKVVGGVSPGKGGKTH-------LDLP--VFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~-~g~~vv~~VnP~~~g~~i-------~Gip--~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
..++++|+|+ |.+|+...+.+.+ .+.+.|...|+. ..++. .|++ .+ +++++... .|+++.+||..
T Consensus 120 ~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~--aDIVi~aT~s~ 194 (313)
T 3hdj_A 120 RSSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQ--ADIVVTATRST 194 (313)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHH--CSEEEECCCCS
T ss_pred CCcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhh--CCEEEEccCCC
Confidence 4689999999 9999999888877 467656678887 22221 2543 44 88888776 99999999875
Q ss_pred hHHHHH-HHHHHcCCC
Q psy8894 99 GAAKAI-HEALDAEMP 113 (306)
Q Consensus 99 ~~~~~~-~e~~~~Gi~ 113 (306)
. .++ .+.++.|..
T Consensus 195 ~--pvl~~~~l~~G~~ 208 (313)
T 3hdj_A 195 T--PLFAGQALRAGAF 208 (313)
T ss_dssp S--CSSCGGGCCTTCE
T ss_pred C--cccCHHHcCCCcE
Confidence 3 233 233455544
No 422
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=82.92 E-value=3.1 Score=41.61 Aligned_cols=89 Identities=10% Similarity=0.102 Sum_probs=55.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCCCcee---cCeecc-CC-------HHhhhhcCCCcEEEEecC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTH---LDLPVF-NT-------VKEARDATGAEATVIYVP 96 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~g~~i---~Gip~y-~s-------l~el~~~~~iDlavi~vp 96 (306)
+.++|.|.|++|-.|+...+.|.+. |+++++........... .++..+ -+ ++++.+. +|+++-+..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--~D~Vih~Aa 391 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK--CDVVLPLVA 391 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHH--CSEEEECCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcC--CCEEEECce
Confidence 4578999999999999999999987 88877554322100111 122222 12 3333333 899987532
Q ss_pred c------------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 97 P------------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 97 ~------------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
. ..+..+++.|.+.| +.++.+++
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS 432 (660)
T 1z7e_A 392 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 432 (660)
T ss_dssp CCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred ecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEec
Confidence 1 12445678888888 77776665
No 423
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=82.77 E-value=1.8 Score=37.99 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEe
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGG 60 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~ 60 (306)
.+++.|.|+++-.|+...+.|.+.|++++..
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~ 35 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGT 35 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 5789999999999999999999999997643
No 424
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=82.73 E-value=1.9 Score=40.34 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=64.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCC-------------C----------c--eecC--eecc--CCH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKG-------------G----------K--THLD--LPVF--NTV 79 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~-------------g----------~--~i~G--ip~y--~sl 79 (306)
..+|+|-|+ |+.|+.+.+.+.+. ++++++.-||... | + .+.| +++| .+.
T Consensus 4 ~~kv~INGf-GrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (345)
T 4dib_A 4 MTRVAINGF-GRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDP 82 (345)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCCh
Confidence 468999999 99999999877765 6888866555210 0 0 1234 4455 356
Q ss_pred Hhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 80 KEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 80 ~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
++++- +.++|+++-++......+-+...++.|.|.+++
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViI 121 (345)
T 4dib_A 83 KELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVIL 121 (345)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEE
Confidence 67653 236999999999988999999999999998886
No 425
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=82.52 E-value=3.1 Score=38.87 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=60.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHc-CCeEEEeeCCCCC--------------Cc---e---------ecC--eeccC--C
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKG--------------GK---T---------HLD--LPVFN--T 78 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~-g~~vv~~VnP~~~--------------g~---~---------i~G--ip~y~--s 78 (306)
..+|+|-|. |+.|+...+.+.+. .+++++.-+|-.. |. + +.| ++++. +
T Consensus 11 ~~kv~INGf-GrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeCC-chHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 468999998 99999999887765 7888865553210 10 1 122 33443 4
Q ss_pred HHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 79 VKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 79 l~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.++++- +.++|+++.+++.....+.+...++.|.|.+++
T Consensus 90 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVI 129 (345)
T 2b4r_O 90 PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIM 129 (345)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred cccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEE
Confidence 455542 125999999999888888899999999998775
No 426
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=82.49 E-value=1.5 Score=38.59 Aligned_cols=82 Identities=20% Similarity=0.196 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcE-EEEecCchhHHHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEA-TVIYVPPPGAAKAIHE 106 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDl-avi~vp~~~~~~~~~e 106 (306)
.+.+++.|.|+++-+|+...+.|.+.|++++ .++.+. +.. .+++.+. ++.. ..+.+-++.+.+++++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~--------~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 92 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVI-ISYRTE--HAS--------VTELRQA-GAVALYGDFSCETGIMAFIDL 92 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEE-EEESSC--CHH--------HHHHHHH-TCEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCh--HHH--------HHHHHhc-CCeEEECCCCCHHHHHHHHHH
Confidence 3457899999999999999999999999976 444432 111 1222221 1222 2244566777777887
Q ss_pred HHHc--CCCEEEEecCCC
Q psy8894 107 ALDA--EMPLIVCITEGI 122 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t~Gf 122 (306)
+.+. ++..+++ ..|.
T Consensus 93 ~~~~~g~iD~lv~-nAg~ 109 (260)
T 3gem_A 93 LKTQTSSLRAVVH-NASE 109 (260)
T ss_dssp HHHHCSCCSEEEE-CCCC
T ss_pred HHHhcCCCCEEEE-CCCc
Confidence 7764 5887665 5554
No 427
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=82.39 E-value=4.6 Score=39.01 Aligned_cols=117 Identities=12% Similarity=0.139 Sum_probs=67.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe-------eCCCCC-Cc-eec-----------CeeccC--------CHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG-------VSPGKG-GK-THL-----------DLPVFN--------TVK 80 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~-------VnP~~~-g~-~i~-----------Gip~y~--------sl~ 80 (306)
+.++|+|.|. |++|....+.|.+.|.++|+. +||+.. -. ++. .+.-|+ +-+
T Consensus 229 ~g~~v~VqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~~ 307 (449)
T 1bgv_A 229 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGE 307 (449)
T ss_dssp TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEETC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeCch
Confidence 4589999998 999999999999999998875 455421 00 000 011110 011
Q ss_pred hhhhcCCCcEEEEe-cCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhc-CCeEEcc----CCCceec
Q psy8894 81 EARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQS-KSRLIGP----NCPGIIA 152 (306)
Q Consensus 81 el~~~~~iDlavi~-vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~-gi~iiGP----Nc~Gi~~ 152 (306)
++.. .++|+.+=| ++..-..+.++++.+.|+|.|+=.+-+....+..+ +-+++ |+.++ | |+-|++.
T Consensus 308 e~~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~----~l~~~~Gi~~~-PD~~aNaGGV~~ 379 (449)
T 1bgv_A 308 KPWG-QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALR----FLMQQPNMVVA-PSKAVNAGGVLV 379 (449)
T ss_dssp CGGG-SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHH----HHHHCTTCEEE-CHHHHTTHHHHH
T ss_pred hhhc-CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHH----HHHHcCCEEEE-ChHHhcCCCcee
Confidence 1221 247888765 34455677888888889996553333333222222 33566 87655 4 4445544
No 428
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=82.29 E-value=3.1 Score=35.87 Aligned_cols=30 Identities=20% Similarity=0.157 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
.+++.|.|+++..|+...+.|.+.|++++.
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~ 44 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAV 44 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 478999999999999999999999999763
No 429
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=81.91 E-value=4.3 Score=39.31 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=49.9
Q ss_pred cCCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCC--c--eecCeeccC--CHHhhhhcCCCcEEEEe--cCc
Q psy8894 27 LTSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGG--K--THLDLPVFN--TVKEARDATGAEATVIY--VPP 97 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g--~--~i~Gip~y~--sl~el~~~~~iDlavi~--vp~ 97 (306)
..+.++|.|+|. |..|.. ..+.|.+.|+++. +.|.+... + +-.|++++. +.+.+. ++|++|+. +|+
T Consensus 19 ~~~~~~v~viGi-G~sG~s~~A~~l~~~G~~V~-~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~---~~d~vV~Spgi~~ 93 (494)
T 4hv4_A 19 MRRVRHIHFVGI-GGAGMGGIAEVLANEGYQIS-GSDLAPNSVTQHLTALGAQIYFHHRPENVL---DASVVVVSTAISA 93 (494)
T ss_dssp ---CCEEEEETT-TSTTHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHHTTCEEESSCCGGGGT---TCSEEEECTTSCT
T ss_pred hccCCEEEEEEE-cHhhHHHHHHHHHhCCCeEE-EEECCCCHHHHHHHHCCCEEECCCCHHHcC---CCCEEEECCCCCC
Confidence 455689999999 989985 5888999999986 66654310 0 124777764 233332 38998875 444
Q ss_pred hhHHHHHHHHHHcCCC
Q psy8894 98 PGAAKAIHEALDAEMP 113 (306)
Q Consensus 98 ~~~~~~~~e~~~~Gi~ 113 (306)
+ -+.+.++.++|++
T Consensus 94 ~--~p~~~~a~~~gi~ 107 (494)
T 4hv4_A 94 D--NPEIVAAREARIP 107 (494)
T ss_dssp T--CHHHHHHHHTTCC
T ss_pred C--CHHHHHHHHCCCC
Confidence 2 2345556666655
No 430
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.89 E-value=1.7 Score=41.88 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=48.9
Q ss_pred CcEEEEEcCCCCCChH---------HHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhH
Q psy8894 30 KSKVICQGFTGKQGTF---------HSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGA 100 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~---------~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~ 100 (306)
+++|+|.|.+=|++.- +.+.|++.|.++. ..||.....+..|.++..+++++.+. .|++|+....+..
T Consensus 332 ~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~-~~DP~~~~~~~~~~~~~~~~~~~~~~--aD~iv~~~~~~~~ 408 (432)
T 3pid_A 332 PKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVI-IYEPVMQEDEFFNSRVVRDLNAFKQE--ADVIISNRMAEEL 408 (432)
T ss_dssp CSSEEEECC-----------CHHHHHHHHHHHTTCCEE-EECTTCCSSEETTEEECCCHHHHHHH--CSEEECSSCCGGG
T ss_pred CCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEE-EECCCCChhhcCCceEECCHHHHHhc--CCEEEECCCChHH
Confidence 6789999998777642 3567888899875 78887644567788888899998876 8999887765544
Q ss_pred HH
Q psy8894 101 AK 102 (306)
Q Consensus 101 ~~ 102 (306)
.+
T Consensus 409 ~~ 410 (432)
T 3pid_A 409 AD 410 (432)
T ss_dssp GG
T ss_pred HH
Confidence 33
No 431
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=81.80 E-value=2.4 Score=38.03 Aligned_cols=105 Identities=11% Similarity=0.020 Sum_probs=61.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cCeeccCCHHhhhhcCCCcEEEEecCchhHHH--
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LDLPVFNTVKEARDATGAEATVIYVPPPGAAK-- 102 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~-- 102 (306)
..+++.|+|+ |.+++.+...|.+.|.+-+..+|..... +++ .+.+...++. + . +.|++|-+||......
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~-~-~--~~DivInaTp~gm~~~~~ 192 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE-N-Q--QADILVNVTSIGMKGGKE 192 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT-T-C--CCSEEEECSSTTCTTSTT
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh-c-c--cCCEEEECCCCCccCccc
Confidence 4578999999 9999999999999998644588886411 111 1322222222 2 2 4899999999765321
Q ss_pred -----HHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 103 -----AIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 103 -----~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
+-.+++..+. .++-+.....++ .++ +.|++.|.+++
T Consensus 193 ~~~~~~~~~~l~~~~-~v~DlvY~P~~T---~ll-~~A~~~G~~~i 233 (271)
T 1npy_A 193 EMDLAFPKAFIDNAS-VAFDVVAMPVET---PFI-RYAQARGKQTI 233 (271)
T ss_dssp TTSCSSCHHHHHHCS-EEEECCCSSSSC---HHH-HHHHHTTCEEE
T ss_pred cCCCCCCHHHcCCCC-EEEEeecCCCCC---HHH-HHHHHCCCEEE
Confidence 2234554442 222233322222 233 35789998776
No 432
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.59 E-value=0.82 Score=41.49 Aligned_cols=69 Identities=6% Similarity=-0.051 Sum_probs=45.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee---cCe---ecc--CCHHhhhhcCCCcEEEEecCchh
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH---LDL---PVF--NTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i---~Gi---p~y--~sl~el~~~~~iDlavi~vp~~~ 99 (306)
+.+++.|+|+ |.+|+.....|.+.|++-+..+|.+... +++ .+. .+. .++.+.... .|++|-++|...
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~--aDivIn~t~~~~ 216 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAE--YDIIINTTSVGM 216 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGG--CSEEEECSCTTC
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhcc--CCEEEECCCCCC
Confidence 4578999999 8899999999999998433477876311 111 111 222 234444444 899999998765
Q ss_pred H
Q psy8894 100 A 100 (306)
Q Consensus 100 ~ 100 (306)
.
T Consensus 217 ~ 217 (297)
T 2egg_A 217 H 217 (297)
T ss_dssp S
T ss_pred C
Confidence 4
No 433
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=81.23 E-value=4.8 Score=35.12 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
.+++.|.|+++..|+...+.|.+.|++++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~ 37 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVID 37 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 578999999999999999999999999763
No 434
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=81.05 E-value=4.3 Score=35.06 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
.+++.|.|+++-.|+...+.|.+.|++++ .++.+
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r~ 37 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIV-LNGFG 37 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 46899999999999999999999999976 44443
No 435
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.55 E-value=5.1 Score=37.23 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=62.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee-----------cCeeccCCHHhhhhcCCCcEEEEecCc-
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH-----------LDLPVFNTVKEARDATGAEATVIYVPP- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i-----------~Gip~y~sl~el~~~~~iDlavi~vp~- 97 (306)
..+|+|+|+ |-.|..+.++|...|..-+..||+......- .|.+--..+.+...+..|++-+...+.
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~ 112 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS 112 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 578999999 8899999999999999866688876421111 121111112222222235555544331
Q ss_pred --------------hhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEc
Q psy8894 98 --------------PGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 98 --------------~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiG 144 (306)
....+.+++.++ +...|+..+..+. . ..+..++|+++++.++.
T Consensus 113 i~~~g~~~~~~~~~~~~~~~l~~~l~-~~DlVvd~tDn~~-t--R~lin~~c~~~~~plI~ 169 (340)
T 3rui_A 113 IPMIGHKLVNEEAQHKDFDRLRALIK-EHDIIFLLVDSRE-S--RWLPSLLSNIENKTVIN 169 (340)
T ss_dssp CCCTTSCCSCHHHHHHHHHHHHHHHH-HCSEEEECCSSTG-G--GHHHHHHHHHTTCEEEE
T ss_pred ccccCcccchhhhhcCCHHHHHhhhc-cCCEEEecCCCHH-H--HHHHHHHHHHcCCcEEE
Confidence 112333444443 4677666555543 2 23344678999987775
No 436
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=80.54 E-value=1 Score=39.98 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=52.2
Q ss_pred CccccccccccccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcE
Q psy8894 11 SKVAEEIYAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEA 90 (306)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDl 90 (306)
+..+.+.|+...++ + +.+++.|.|+++-.|+...+.|.+.|++++ .++.+.. +... .. .+++.......+
T Consensus 9 ~~~~~~~~n~~~~~--l-~~k~~lVTGas~GIG~~ia~~la~~G~~V~-~~~r~~~-~~~~--~~---~~~~~~~~~~~~ 78 (281)
T 3v2h_A 9 SGVDLGTENLYFQS--M-MTKTAVITGSTSGIGLAIARTLAKAGANIV-LNGFGAP-DEIR--TV---TDEVAGLSSGTV 78 (281)
T ss_dssp -------------C--C-TTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EECCCCH-HHHH--HH---HHHHHTTCSSCE
T ss_pred ccccccccchhhhc--c-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCCh-HHHH--HH---HHHHhhccCCcE
Confidence 34455555555433 2 247899999999999999999999999976 4544210 1100 01 122221101222
Q ss_pred EE---EecCchhHHHHHHHHHHc--CCCEEEEecCCC
Q psy8894 91 TV---IYVPPPGAAKAIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 91 av---i~vp~~~~~~~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
.. +.+-++.+.++++++.+. ++..+++ ..|.
T Consensus 79 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~-nAg~ 114 (281)
T 3v2h_A 79 LHHPADMTKPSEIADMMAMVADRFGGADILVN-NAGV 114 (281)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHTSSCSEEEE-CCCC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEE-CCCC
Confidence 22 345566777777777764 6887665 5554
No 437
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=80.21 E-value=0.52 Score=45.57 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=28.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEee
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGV 61 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~V 61 (306)
.++++|.|.|++|-.|+...+.|.+.|+++++.+
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~ 181 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFI 181 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEE
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEE
Confidence 4568999999999999999999977788887554
No 438
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=80.10 E-value=1.1 Score=41.97 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEe--eCCCCCCceecC--eeccCCHHhhhhcCCCcEEEEecCchhHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGG--VSPGKGGKTHLD--LPVFNTVKEARDATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~--VnP~~~g~~i~G--ip~y~sl~el~~~~~iDlavi~vp~~~~~~~ 103 (306)
..-++|++.|| +..|....+.+.-..-.+.+. .||...|..+.| +|+++ -+++.+ ..||.+++. ++....++
T Consensus 317 ~~gk~v~~yGa-~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~-p~~~~~-~~~d~vl~~-~~~~~~ei 392 (416)
T 4e2x_A 317 AEGRSVVGYGA-TAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRP-ASAFSD-PYPDYALLF-AWNHAEEI 392 (416)
T ss_dssp HTTCCEEEECC-CSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEE-GGGCCS-SCCSEEEES-CGGGHHHH
T ss_pred HcCCeEEEEcc-ccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCC-HHHHhh-cCCCEEEEe-cchhHHHH
Confidence 34678999999 544544444332111114344 577766778888 99998 556654 369998776 45556666
Q ss_pred HHHH---HHcCCCEEE
Q psy8894 104 IHEA---LDAEMPLIV 116 (306)
Q Consensus 104 ~~e~---~~~Gi~~vv 116 (306)
+++. .+.|-|-|+
T Consensus 393 ~~~~~~~~~~g~~~~~ 408 (416)
T 4e2x_A 393 MAKEQEFHQAGGRWIL 408 (416)
T ss_dssp HHHCHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCEEEE
Confidence 6544 467777543
No 439
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=79.99 E-value=1.7 Score=40.87 Aligned_cols=87 Identities=18% Similarity=0.084 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCChHHHHHH----HHc-CCeEEEeeCCCCC--------------------------------Cce--e
Q psy8894 30 KSKVICQGFTGKQGTFHSKQA----IEY-GTKVVGGVSPGKG--------------------------------GKT--H 70 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l----~~~-g~~vv~~VnP~~~--------------------------------g~~--i 70 (306)
+.+|+|-|+ |+.|+.+.+.| .+. ++++++.-||-.. ++. +
T Consensus 2 ~~kv~INGF-GrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECT-THHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECC-ChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 358999999 99999988873 322 5677766665210 010 2
Q ss_pred cC--eeccC---CHHhhhh-cCCCcEEEEecCchhHHHHHHHHHHcCCCEEEE
Q psy8894 71 LD--LPVFN---TVKEARD-ATGAEATVIYVPPPGAAKAIHEALDAEMPLIVC 117 (306)
Q Consensus 71 ~G--ip~y~---sl~el~~-~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi 117 (306)
.| ++++. +.++++- +.++|+++-++......+-+...++.|.+.+++
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEE
Confidence 23 34553 4555542 125999999999888889999999999998876
No 440
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=79.78 E-value=6.4 Score=33.83 Aligned_cols=29 Identities=24% Similarity=0.202 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVV 58 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv 58 (306)
.+++.|.|+++..|+...+.|.+.|++++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~ 35 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVT 35 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEE
Confidence 47899999999999999999999999976
No 441
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=79.77 E-value=2.2 Score=38.82 Aligned_cols=82 Identities=11% Similarity=0.098 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee----cCeeccC-C------HHhhhhcCCCcEEEEecCch
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH----LDLPVFN-T------VKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i----~Gip~y~-s------l~el~~~~~iDlavi~vp~~ 98 (306)
.++|+|+|+ |+.|+...+.|.+.|. ++ .++.+. +.+ .|++++. + +.++.- .+.|.++++++.+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~-vid~~~--~~~~~~~~~~~~i~gd~~~~~~L~~a~i-~~a~~vi~~~~~d 188 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FV-LAEDEN--VRKKVLRSGANFVHGDPTRVSDLEKANV-RGARAVIVDLESD 188 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EE-EESCGG--GHHHHHHTTCEEEESCTTSHHHHHHTCS-TTEEEEEECCSSH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EE-EEeCCh--hhhhHHhCCcEEEEeCCCCHHHHHhcCh-hhccEEEEcCCcc
Confidence 568999998 9999888888888888 55 677653 211 2444332 2 223311 2489999988865
Q ss_pred h-HHHHHHHHHHcCCC-EEEE
Q psy8894 99 G-AAKAIHEALDAEMP-LIVC 117 (306)
Q Consensus 99 ~-~~~~~~e~~~~Gi~-~vvi 117 (306)
. ...++..+.+.+.+ .++.
T Consensus 189 ~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 189 SETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHHHHCCCCeEEE
Confidence 3 34445556666766 4443
No 442
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.64 E-value=5.1 Score=34.99 Aligned_cols=31 Identities=26% Similarity=0.438 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
+.+++.|.|+++..|+...+.|.+.|++++.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~ 61 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVG 61 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 3578999999999999999999999999763
No 443
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=79.21 E-value=7.5 Score=37.63 Aligned_cols=111 Identities=15% Similarity=0.039 Sum_probs=62.5
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHH-----cCCeEEEee---------------CCCCCCceecC--------------
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIE-----YGTKVVGGV---------------SPGKGGKTHLD-------------- 72 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~-----~g~~vv~~V---------------nP~~~g~~i~G-------------- 72 (306)
+.++++|+|.|++|..|+-.+..+++ ..|++++.. .|+.. -+.+
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v--~v~d~~~~~~L~~~l~~~ 151 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYL--CIHDKSVYEELKELVKNI 151 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEE--EESCGGGTHHHHTGGGGS
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEE--EEcCHHHHHHHHHHhhhh
Confidence 56688999999999999988777776 368876542 22210 0111
Q ss_pred ----eeccC---CHHhhhhcCCCcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhH--HHHHHHHHHHhc-CCeE
Q psy8894 73 ----LPVFN---TVKEARDATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLD--MVKVKHRLIRQS-KSRL 142 (306)
Q Consensus 73 ----ip~y~---sl~el~~~~~iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~--~~~~~~~~ar~~-gi~i 142 (306)
..++. .+.++....++|+++-.+....-..-.-.++++|.+..+ +-. |.- .-.+..++++++ |.++
T Consensus 152 ~~~~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IAL--ANK--ESLV~aG~Lv~~~a~~~~g~~I 227 (488)
T 3au8_A 152 KDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVAL--ANK--ESIVSAGFFLKKLLNIHKNAKI 227 (488)
T ss_dssp TTCCCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEE--CCS--HHHHHHHHHHHHHHHHSTTCEE
T ss_pred cCCCceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEE--ecc--hhhhhchHHHHHHHHhcCCCeE
Confidence 11221 122333222478888777776666666777788855332 422 221 123444567888 7776
Q ss_pred E
Q psy8894 143 I 143 (306)
Q Consensus 143 i 143 (306)
+
T Consensus 228 l 228 (488)
T 3au8_A 228 I 228 (488)
T ss_dssp E
T ss_pred E
Confidence 5
No 444
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=79.17 E-value=1.9 Score=38.25 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=52.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~e 106 (306)
.+++.|.|+++-.|+...+.|.+.|++++ .++.+. .+.. -...+++... ..++.. +.+.++.+.+++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~~~~-~~~~-----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIA-ITGIGD-AEGV-----APVIAELSGL-GARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCC-HHHH-----HHHHHHHHHT-TCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEE-EEeCCC-HHHH-----HHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHH
Confidence 46799999999999999999999999976 443221 0110 1112222221 123222 45667778888888
Q ss_pred HHHc--CCCEEEEecCCC
Q psy8894 107 ALDA--EMPLIVCITEGI 122 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t~Gf 122 (306)
+.+. ++..+++ ..|+
T Consensus 101 ~~~~~g~iD~lvn-nAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVN-NAGI 117 (280)
T ss_dssp HHHHHSCCCEEEE-ECC-
T ss_pred HHHHcCCCCEEEE-CCCc
Confidence 8775 6887775 5554
No 445
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=79.13 E-value=17 Score=28.84 Aligned_cols=111 Identities=5% Similarity=0.016 Sum_probs=60.8
Q ss_pred CcEEEEEcCCCCCCh-------HH---HHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCc--
Q psy8894 30 KSKVICQGFTGKQGT-------FH---SKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPP-- 97 (306)
Q Consensus 30 ~~~VaVvGasg~~G~-------~~---~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~-- 97 (306)
.++|+++|-|-..|. .. .+.+.+.+..+ ..+|-...|....+ ....+++.....+||++++....
T Consensus 2 ~~~i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~-~v~n~g~~G~~~~~--~~~~~~~~~~~~~pd~vvi~~G~ND 78 (185)
T 3hp4_A 2 DNTILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDI-VLINASISGETSGG--ALRRLDALLEQYEPTHVLIELGAND 78 (185)
T ss_dssp CEEEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCE-EEEECCCTTCCHHH--HHHHHHHHHHHHCCSEEEEECCHHH
T ss_pred CCeEEEECCcccccCCCCCcccHHHHHHHHHHhcCCcE-EEEECCcCCccHHH--HHHHHHHHHhhcCCCEEEEEeeccc
Confidence 468999998765542 11 23444444443 24565544433221 12223343332359999997432
Q ss_pred -----------hhHHHHHHHHHHcCCCEEEEecC----CCChh---HHHHHHHHHHHhcCCeEEc
Q psy8894 98 -----------PGAAKAIHEALDAEMPLIVCITE----GIPQL---DMVKVKHRLIRQSKSRLIG 144 (306)
Q Consensus 98 -----------~~~~~~~~e~~~~Gi~~vvi~t~----Gf~e~---~~~~~~~~~ar~~gi~iiG 144 (306)
+....+++.+.+.+.+.+++ +. .+..+ ...+..+++|+++++.++-
T Consensus 79 ~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~-~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~vd 142 (185)
T 3hp4_A 79 GLRGFPVKKMQTNLTALVKKSQAANAMTALM-EIYIPPNYGPRYSKMFTSSFTQISEDTNAHLMN 142 (185)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTCEEEEE-CCCCCSTTCHHHHHHHHHHHHHHHHHHCCEEEC
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHcCCeEEEE-eCCCCCcccHHHHHHHHHHHHHHHHHcCCEEEc
Confidence 23445677777788887664 42 22222 2234556788999988874
No 446
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=78.62 E-value=5 Score=38.35 Aligned_cols=107 Identities=19% Similarity=0.194 Sum_probs=60.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHH-cCCeEEEeeCCCCC-----Ccee----------cCeeccC-----CHHhhhhcCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIE-YGTKVVGGVSPGKG-----GKTH----------LDLPVFN-----TVKEARDATG 87 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~-~g~~vv~~VnP~~~-----g~~i----------~Gip~y~-----sl~el~~~~~ 87 (306)
+.++|+|.|. |+.|+...+.|.+ .|.++++..|.+.. |-.+ ..+.-|+ +-+++.. .+
T Consensus 208 ~g~~vaVqG~-GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~-~~ 285 (415)
T 2tmg_A 208 KKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE-LD 285 (415)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT-CS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc-CC
Confidence 3588999998 9999999999998 89999876554310 1000 0111111 2344433 25
Q ss_pred CcEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 88 AEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 88 iDlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
+|+++-|...... .-+.+.+.++|.|+=.+-+....+..+ +.+++|+.++
T Consensus 286 ~DIliP~A~~n~i--~~~~a~~l~ak~V~EgAN~p~t~~a~~----~l~~~Gi~~~ 335 (415)
T 2tmg_A 286 VDILVPAALEGAI--HAGNAERIKAKAVVEGANGPTTPEADE----ILSRRGILVV 335 (415)
T ss_dssp CSEEEECSSTTSB--CHHHHTTCCCSEEECCSSSCBCHHHHH----HHHHTTCEEE
T ss_pred CcEEEecCCcCcc--CcccHHHcCCeEEEeCCCcccCHHHHH----HHHHCCCEEE
Confidence 8999988665433 224444567886542222332222222 3357786644
No 447
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=78.61 E-value=4.1 Score=35.46 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEE
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVG 59 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~ 59 (306)
.+++.|.|+++..|+...+.|.+.|++++.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~ 50 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAI 50 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 478999999999999999999999999763
No 448
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.59 E-value=4.1 Score=36.10 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~ 105 (306)
+.+.+.|.|+++-.|+...+.|.+.|++++ .++.+. +.. -...+++... ..++.. +.+-++.+..+++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~ 97 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVG-ALGRTR--TEV-----EEVADEIVGA-GGQAIALEADVSDELQMRNAVR 97 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHH-----HHHHHHHTTT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHH-----HHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999999999976 444332 111 0112222221 123222 3456667777777
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|+
T Consensus 98 ~~~~~~g~iD~lVn-nAg~ 115 (283)
T 3v8b_A 98 DLVLKFGHLDIVVA-NAGI 115 (283)
T ss_dssp HHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHhCCCCEEEE-CCCC
Confidence 77764 6887665 5554
No 449
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=78.41 E-value=2.9 Score=38.55 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCC---Cc--ee-cC-------eeccCC-HHhhhhcCCCcEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKG---GK--TH-LD-------LPVFNT-VKEARDATGAEATV 92 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~---g~--~i-~G-------ip~y~s-l~el~~~~~iDlav 92 (306)
++++|+|+|+ |.+|......+...|+ +++ .+|.... |. ++ .+ +.++.+ .+++ . +.|++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~-l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~-~--~aDvVv 78 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELV-VIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDC-K--DADIVC 78 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGG-T--TCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHh-C--CCCEEE
Confidence 4679999998 9999888777777776 454 6665430 10 01 12 223322 3333 2 389999
Q ss_pred EecCch----------------hHHHHHHHHHHcCCCEEEEecC
Q psy8894 93 IYVPPP----------------GAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 93 i~vp~~----------------~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
++.+.. ...++++.+.+.+.+++++.-+
T Consensus 79 i~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 79 ICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 986421 1345566666777666555444
No 450
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=78.40 E-value=1.9 Score=37.78 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcE-EEEecCchhHHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEA-TVIYVPPPGAAKAIHEA 107 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDl-avi~vp~~~~~~~~~e~ 107 (306)
+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. +..... . +.. ..+.+-++.+.++++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~~~----------~---~~~~~~Dv~d~~~v~~~~~~~ 90 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVV-ATSRSI--KPSADP----------D---IHTVAGDISKPETADRIVREG 90 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEESSC--CCCSST----------T---EEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCh--hhcccC----------c---eEEEEccCCCHHHHHHHHHHH
Confidence 457899999999999999999999999976 443332 111000 0 111 11345566677777777
Q ss_pred HHc--CCCEEEEecCCC
Q psy8894 108 LDA--EMPLIVCITEGI 122 (306)
Q Consensus 108 ~~~--Gi~~vvi~t~Gf 122 (306)
.+. ++..+++ ..|.
T Consensus 91 ~~~~g~iD~lv~-nAg~ 106 (260)
T 3un1_A 91 IERFGRIDSLVN-NAGV 106 (260)
T ss_dssp HHHHSCCCEEEE-CCCC
T ss_pred HHHCCCCCEEEE-CCCC
Confidence 664 6887765 5554
No 451
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=78.32 E-value=4.7 Score=35.43 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=52.7
Q ss_pred CCCcEEEEEcCCCC--CChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcC-CCcE-EEEecCchhHHHH
Q psy8894 28 TSKSKVICQGFTGK--QGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDAT-GAEA-TVIYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg~--~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~-~iDl-avi~vp~~~~~~~ 103 (306)
.+.+++.|.|+++. .|+...+.|.+.|++++ .++.+. .. ..++++.++. .+.. ..+.+..+.+.++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~~-~~--------~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTYVGQ-FK--------DRVEKLCAEFNPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEECTT-CH--------HHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-EeeCch-HH--------HHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence 34578999999955 99999999999999965 444331 01 1133332210 1222 2244666777888
Q ss_pred HHHHHHc--CCCEEEEecCCCC
Q psy8894 104 IHEALDA--EMPLIVCITEGIP 123 (306)
Q Consensus 104 ~~e~~~~--Gi~~vvi~t~Gf~ 123 (306)
++++.+. .+..+++ ..|+.
T Consensus 94 ~~~~~~~~g~id~li~-nAg~~ 114 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVH-SIAFA 114 (280)
T ss_dssp HHHHHHHCSSCCEEEE-CCCCC
T ss_pred HHHHHHHcCCCCEEEE-CCccC
Confidence 8887764 5887665 55653
No 452
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=78.32 E-value=5.1 Score=36.59 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=48.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC------ceecCeeccCCHHhhhh-cCCCcEEEEecCchhHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG------KTHLDLPVFNTVKEARD-ATGAEATVIYVPPPGAAKA 103 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g------~~i~Gip~y~sl~el~~-~~~iDlavi~vp~~~~~~~ 103 (306)
++|+|+|. |-.|+...+.+++.|++++ .+|++... ++..-++.+.+.+.+.. ..++|+++...-.......
T Consensus 2 K~I~ilGg-g~~g~~~~~~Ak~~G~~vv-~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~ 79 (363)
T 4ffl_A 2 KTICLVGG-KLQGFEAAYLSKKAGMKVV-LVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENLACIEF 79 (363)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCChhHHHH
Confidence 68999997 7777878888899999977 55654311 12222334444333321 2359988765544444555
Q ss_pred HHHHHHcCC
Q psy8894 104 IHEALDAEM 112 (306)
Q Consensus 104 ~~e~~~~Gi 112 (306)
+.++.+.+.
T Consensus 80 ~~~~~~~~~ 88 (363)
T 4ffl_A 80 LNSIKEKFS 88 (363)
T ss_dssp HHHHGGGCS
T ss_pred HHHHHHHCC
Confidence 666666543
No 453
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=78.17 E-value=3.7 Score=34.39 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=39.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecC-chhHHHHHHHHHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVP-PPGAAKAIHEALD 109 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp-~~~~~~~~~e~~~ 109 (306)
++++|+|+ |.-|+.+...+++.+|++++.+|.+. |.|++.+.++ +-+++..+ +..-....+++.+
T Consensus 4 ~~~~I~Ga-gg~gk~v~~~~~~~~~~v~~f~Dd~~------g~~vig~~~~-------~~~~iaig~~~~r~~~~~~l~~ 69 (194)
T 3bfp_A 4 EKIYIYGA-SGHGLVCEDVAKNMGYKECIFLDDFK------GMKFESTLPK-------YDFFIAIGNNEIRKKIYQKISE 69 (194)
T ss_dssp SEEEEEC---CHHHHHHHHHHHHTCSEEEEEC--------------CCCCC-------CEEEECCCCHHHHHHHHHHHHT
T ss_pred ccEEEEeC-CHHHHHHHHHHHhCCCeEEEEEeCCC------CCeEECCccc-------ceEEEEeCCHHHHHHHHHHHHH
Confidence 46999999 77889888877777899888888641 5566654332 23455553 3344555566666
Q ss_pred cCCC
Q psy8894 110 AEMP 113 (306)
Q Consensus 110 ~Gi~ 113 (306)
.|.+
T Consensus 70 ~~~~ 73 (194)
T 3bfp_A 70 NGFK 73 (194)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 6654
No 454
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=78.12 E-value=0.98 Score=42.14 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
++++|+|+|+ |..|+...+.+...|++++ .++++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~-~~d~~ 198 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVT-ILDVN 198 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEE-EEECC
Confidence 4689999999 9999999999999999865 55554
No 455
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.10 E-value=5.4 Score=36.25 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPG 64 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~ 64 (306)
++++|+|+|+ |.+|......+...+. +++ .+|.+
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~-l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIV-LIDAN 40 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 4679999999 9999877666666554 443 66654
No 456
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=78.08 E-value=2 Score=36.85 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=28.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP 63 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP 63 (306)
+.++|.|.|+++..|+...+.|.+.|++++ .++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~-~~~r 43 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVV-VSDI 43 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEE-EEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEE-EEcC
Confidence 357899999999999999999999999976 4443
No 457
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=77.96 E-value=3.1 Score=35.29 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=28.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
++|.|.|+++..|+...+.|.+.|++++...+.+
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~ 35 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQN 35 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 5799999999999999999999999977443443
No 458
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=77.74 E-value=5.8 Score=38.54 Aligned_cols=67 Identities=16% Similarity=0.142 Sum_probs=49.3
Q ss_pred CCcEEEEEcCCCCCCh---------HHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchh
Q psy8894 29 SKSKVICQGFTGKQGT---------FHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG 99 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~---------~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~ 99 (306)
+.++|+|.|.+=|++. .+.+.|++.|.++. ..||.. .++.++....++.+..+. .|++|+.|.-+.
T Consensus 352 ~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~-~~DP~~--~~~~~~~~~~~~~~~~~~--ad~vvi~t~~~~ 426 (478)
T 3g79_A 352 DGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVM-VHDPYV--VNYPGVEISDNLEEVVRN--ADAIVVLAGHSA 426 (478)
T ss_dssp TTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEE-EECSSC--CCBTTBCEESCHHHHHTT--CSEEEECSCCHH
T ss_pred CCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEE-EECCCc--ccccCcceecCHHHHHhc--CCEEEEecCCHH
Confidence 5689999999877654 24678888999875 789976 344444444677777665 999999998665
Q ss_pred H
Q psy8894 100 A 100 (306)
Q Consensus 100 ~ 100 (306)
-
T Consensus 427 f 427 (478)
T 3g79_A 427 Y 427 (478)
T ss_dssp H
T ss_pred H
Confidence 4
No 459
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=77.59 E-value=1.4 Score=38.18 Aligned_cols=51 Identities=8% Similarity=-0.054 Sum_probs=28.1
Q ss_pred ccccccccccccccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC
Q psy8894 12 KVAEEIYAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP 63 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP 63 (306)
.++...|........-...+++.|.|+++..|+...+.|.+.|++++ .++.
T Consensus 4 ~~~~~~~~~~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~r 54 (251)
T 3orf_A 4 SHHHHHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTI-SIDF 54 (251)
T ss_dssp ------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred ccccccccccccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 33344444444332223347899999999999999999999999976 4443
No 460
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.42 E-value=1.5 Score=42.41 Aligned_cols=86 Identities=17% Similarity=0.193 Sum_probs=53.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-c---eecCeec------cCC-HHhhhhcCCCcEEEEecCc
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-K---THLDLPV------FNT-VKEARDATGAEATVIYVPP 97 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~---~i~Gip~------y~s-l~el~~~~~iDlavi~vp~ 97 (306)
+.++|+|+|+ |+.|+...+.|.+.|++++ .|+.+... + +..++++ .++ |.++--+ +.|+.|.+++.
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~-vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~-~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDIT-IVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQ-DADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEE-EEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTT-TCSEEEECCSC
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCC-cCCEEEEEcCC
Confidence 4678999999 9999999999988898876 77765310 0 1123332 222 4444322 58999888888
Q ss_pred hhHHHHHHHHH-Hc-CCCEEEE
Q psy8894 98 PGAAKAIHEAL-DA-EMPLIVC 117 (306)
Q Consensus 98 ~~~~~~~~e~~-~~-Gi~~vvi 117 (306)
+.+--++-..+ +. +++.++.
T Consensus 79 De~Nl~~~~~Ak~~~~~~~~ia 100 (461)
T 4g65_A 79 DETNMAACQVAFTLFNTPNRIA 100 (461)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEE
T ss_pred hHHHHHHHHHHHHhcCCcccee
Confidence 76544333333 32 5554443
No 461
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=77.33 E-value=1.8 Score=38.19 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=52.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAI 104 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~ 104 (306)
.+.+++.|.|+++-+|+...+.|.+.|++++....... +.. -...+++... +.++.. +.+-++.+..++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~--~~~-----~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~ 97 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA--GAA-----DEVVAAIAAA-GGEAFAVKADVSQESEVEALF 97 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--HHH-----HHHHHHHHHT-TCCEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh--HHH-----HHHHHHHHhc-CCcEEEEECCCCCHHHHHHHH
Confidence 34678999999999999999999999999763322121 110 0001222211 122222 345566677777
Q ss_pred HHHHHc--CCCEEEEecCCCC
Q psy8894 105 HEALDA--EMPLIVCITEGIP 123 (306)
Q Consensus 105 ~e~~~~--Gi~~vvi~t~Gf~ 123 (306)
+++.+. ++..+++ ..|..
T Consensus 98 ~~~~~~~g~id~lv~-nAg~~ 117 (269)
T 4dmm_A 98 AAVIERWGRLDVLVN-NAGIT 117 (269)
T ss_dssp HHHHHHHSCCCEEEE-CCCCC
T ss_pred HHHHHHcCCCCEEEE-CCCCC
Confidence 777664 6887665 55553
No 462
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=77.22 E-value=2 Score=37.52 Aligned_cols=84 Identities=17% Similarity=0.138 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhc-CCCc-EEEEecCchhHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDA-TGAE-ATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~-~~iD-lavi~vp~~~~~~~~~e 106 (306)
+.+++.|.|+++-.|+...+.|.+.|++++...+... +.. -...+++.+. ..+. +..+.+-++.+..++++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA--EGA-----ATAVAEIEKLGRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC--HHH-----HHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHH-----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4578999999999999999999999999763324332 110 0112222211 0122 22245666777888888
Q ss_pred HHHc--CCCEEEEec
Q psy8894 107 ALDA--EMPLIVCIT 119 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t 119 (306)
+.+. ++..+++.+
T Consensus 80 ~~~~~g~id~lv~nA 94 (259)
T 3edm_A 80 AADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHCSEEEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 8775 577766533
No 463
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=77.06 E-value=6.1 Score=35.89 Aligned_cols=84 Identities=19% Similarity=0.220 Sum_probs=50.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHcCC-eEEEeeCCCCCCc-----ee------c--Ceec--cCCHHhhhhcCCCcEEEEec
Q psy8894 32 KVICQGFTGKQGTFHSKQAIEYGT-KVVGGVSPGKGGK-----TH------L--DLPV--FNTVKEARDATGAEATVIYV 95 (306)
Q Consensus 32 ~VaVvGasg~~G~~~~~~l~~~g~-~vv~~VnP~~~g~-----~i------~--Gip~--y~sl~el~~~~~iDlavi~v 95 (306)
+|+|+|+ |.+|......+...++ +++ .+|.+.... ++ . ..++ +.+.+++. +.|++|++.
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~---~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDMR---GSDIVLVTA 75 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEE-EECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT---TCSEEEECC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEE-EEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHhC---CCCEEEEeC
Confidence 5899999 9999876655555566 343 666543100 00 0 2122 23554443 389999986
Q ss_pred Cchh----------------HHHHHHHHHHcCCCEEEEecC
Q psy8894 96 PPPG----------------AAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 96 p~~~----------------~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+... ..++++++.+...++++++.+
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 5544 667777777766665444443
No 464
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=77.03 E-value=2.4 Score=38.25 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
+.++|.|||. |+.|..-.+.|++.|.+++ .|+|..
T Consensus 12 ~~k~VLVVGg-G~va~rka~~Ll~~Ga~Vt-Viap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLT-LVSPDL 46 (274)
T ss_dssp TTCEEEEEEE-SHHHHHHHHHHGGGTCEEE-EEEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCEEE-EEcCCC
Confidence 4689999999 7777666788899999865 677653
No 465
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=76.97 E-value=3.2 Score=35.82 Aligned_cols=98 Identities=7% Similarity=0.054 Sum_probs=51.9
Q ss_pred ccccccccccccccCCCcEEEEEcCCCCCChHHHHHHHHcC---CeEEEeeCCCCCCceecCeeccCCHHhhhhc-CCCc
Q psy8894 14 AEEIYAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYG---TKVVGGVSPGKGGKTHLDLPVFNTVKEARDA-TGAE 89 (306)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g---~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~-~~iD 89 (306)
+..+++... .....+.++|.|.|+++..|+...+.|.+.| ++++ .++.+. ... . .+.++.+. ..+.
T Consensus 6 ~~~~~~~~~-~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~-~~~r~~--~~~---~---~~~~l~~~~~~~~ 75 (267)
T 1sny_A 6 HHHHHSSGL-VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLF-TTCRNR--EQA---K---ELEDLAKNHSNIH 75 (267)
T ss_dssp ---------------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEE-EEESCT--TSC---H---HHHHHHHHCTTEE
T ss_pred cchhhcccc-cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEE-EEecCh--hhh---H---HHHHhhccCCceE
Confidence 333333333 3333445789999999999999999999998 8876 444332 111 1 13333221 0122
Q ss_pred EE-EEecCchhHHHHHHHHHHc----CCCEEEEecCCC
Q psy8894 90 AT-VIYVPPPGAAKAIHEALDA----EMPLIVCITEGI 122 (306)
Q Consensus 90 la-vi~vp~~~~~~~~~e~~~~----Gi~~vvi~t~Gf 122 (306)
.. .+.+..+.+.++++++.+. ++..++. ..|+
T Consensus 76 ~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~-~Ag~ 112 (267)
T 1sny_A 76 ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFN-NAGI 112 (267)
T ss_dssp EEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEE-CCCC
T ss_pred EEEecCCChHHHHHHHHHHHHhcCCCCccEEEE-CCCc
Confidence 22 2345566777777776653 5887765 5554
No 466
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=76.95 E-value=11 Score=34.77 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=29.9
Q ss_pred cCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 27 LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 27 ~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
+.+.++|.|+|. |..|+...+.+++.|++++ .++|..
T Consensus 9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~vi-v~d~~~ 45 (377)
T 3orq_A 9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVV-VLDPSE 45 (377)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEECCC
Confidence 445689999998 8888888999999999976 556643
No 467
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.94 E-value=12 Score=36.52 Aligned_cols=84 Identities=10% Similarity=0.011 Sum_probs=52.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-ce----ecCeeccC-CHHhhhhcCCCcEEEEecCchhH-HHH
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KT----HLDLPVFN-TVKEARDATGAEATVIYVPPPGA-AKA 103 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~----i~Gip~y~-sl~el~~~~~iDlavi~vp~~~~-~~~ 103 (306)
++|+|+|+ |+.|+...+.|.+.|++++ .|+.+... ++ +.|-..-+ .|.++.-+ +.|.+|++++.+.. .-+
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~-vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~-~ad~vi~~~~~d~~ni~~ 425 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFI-LIDRQESPVCNDHVVVYGDATVGQTLRQAGID-RASGIIVTTNDDSTNIFL 425 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEE-EEESSCCSSCCSSCEEESCSSSSTHHHHHTTT-SCSEEEECCSCHHHHHHH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEE-EEECChHHHhhcCCEEEeCCCCHHHHHhcCcc-ccCEEEEECCCchHHHHH
Confidence 78999999 9999999999999999976 55443311 11 22222222 24444332 58999998887643 223
Q ss_pred HHHHHHcCCC-EEEE
Q psy8894 104 IHEALDAEMP-LIVC 117 (306)
Q Consensus 104 ~~e~~~~Gi~-~vvi 117 (306)
+..|.+.|.+ .++.
T Consensus 426 ~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 426 TLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHCSSSEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 4455556766 5554
No 468
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=76.81 E-value=5.9 Score=34.95 Aligned_cols=89 Identities=18% Similarity=0.228 Sum_probs=53.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCe--eccCCHHhhhhcCCCcEEE---EecCchhHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDL--PVFNTVKEARDATGAEATV---IYVPPPGAAKA 103 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gi--p~y~sl~el~~~~~iDlav---i~vp~~~~~~~ 103 (306)
+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. +....+ ......+++... +.++.. +.+.++.+.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVA-LVAKSA--EPHPKLPGTIYTAAKEIEEA-GGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEE-EEESCC--SCCSSSCCCHHHHHHHHHHH-TSEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEECCh--hhhhhhhHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHH
Confidence 357899999999999999999999999976 444332 111111 111112222221 223332 34566777778
Q ss_pred HHHHHHc--CCCEEEEecCCC
Q psy8894 104 IHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 104 ~~e~~~~--Gi~~vvi~t~Gf 122 (306)
++++.+. ++..+++ ..|+
T Consensus 84 ~~~~~~~~g~id~lvn-nAg~ 103 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVN-NASA 103 (285)
T ss_dssp HHHHHHHHSCCSEEEE-CCCC
T ss_pred HHHHHHHcCCCCEEEE-CCCC
Confidence 8877765 6887765 5554
No 469
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=76.57 E-value=6.2 Score=36.26 Aligned_cols=90 Identities=16% Similarity=0.203 Sum_probs=54.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCC-CceecCeeccCCHHhhhhcCCCcEE---EEecCchhHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKG-GKTHLDLPVFNTVKEARDATGAEAT---VIYVPPPGAAKAI 104 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~-g~~i~Gip~y~sl~el~~~~~iDla---vi~vp~~~~~~~~ 104 (306)
+.+++.|.|+++-+|+...+.|.+.|++++ .++.+.. .++..+ .++...+++... ..++. .+.+-.+.+.+++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vv-l~~r~~~~~~~l~~-~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIV-IAAKTAQPHPKLLG-TIYTAAEEIEAV-GGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEE-EEESCCSCCSSSCC-CHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEE-EEECChhhhhhhHH-HHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHH
Confidence 357899999999999999999999999976 3333220 011111 122222333221 12222 2456677788888
Q ss_pred HHHHHc--CCCEEEEecCCC
Q psy8894 105 HEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 105 ~e~~~~--Gi~~vvi~t~Gf 122 (306)
+++.+. ++..+++ ..|+
T Consensus 121 ~~~~~~~g~iDilVn-nAG~ 139 (346)
T 3kvo_A 121 EKAIKKFGGIDILVN-NASA 139 (346)
T ss_dssp HHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHcCCCCEEEE-CCCC
Confidence 888775 7997775 5554
No 470
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=76.54 E-value=5.8 Score=33.67 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEe
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGG 60 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~ 60 (306)
.+++.|.|+++..|+...+.|.+.|++++..
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLN 35 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 4789999999999999999999999997643
No 471
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.48 E-value=2.1 Score=38.61 Aligned_cols=67 Identities=13% Similarity=0.110 Sum_probs=45.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCC-cee----c------CeeccC--CHHhhhhcCCCcEEEEec
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGG-KTH----L------DLPVFN--TVKEARDATGAEATVIYV 95 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g-~~i----~------Gip~y~--sl~el~~~~~iDlavi~v 95 (306)
+.+++.|+|+ |..|+.....|.+.|.+-+..+|.+... +++ . .+..++ ++.+...+ .|++|-+|
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~--~DiVInaT 202 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA--ADGVVNAT 202 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH--SSEEEECS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc--CCEEEECC
Confidence 4578999999 8889999999999999644578876411 111 0 122333 66666555 89999998
Q ss_pred Cch
Q psy8894 96 PPP 98 (306)
Q Consensus 96 p~~ 98 (306)
|.-
T Consensus 203 p~G 205 (283)
T 3jyo_A 203 PMG 205 (283)
T ss_dssp STT
T ss_pred CCC
Confidence 854
No 472
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=76.44 E-value=6.3 Score=38.15 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=69.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeC-------CCCCC-cee---------cC--eecc----C-----CHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVS-------PGKGG-KTH---------LD--LPVF----N-----TVK 80 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~Vn-------P~~~g-~~i---------~G--ip~y----~-----sl~ 80 (306)
+.++|+|.|. |+.|....+.|.+.|.++|+..| |+..- +++ .+ +.-| + +-+
T Consensus 238 ~g~~VaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~ 316 (456)
T 3r3j_A 238 ENKKCLVSGS-GNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQ 316 (456)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSC
T ss_pred cCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCc
Confidence 3578999999 99999999999999999875544 43110 000 00 1111 1 112
Q ss_pred hhhhcCCCcEEEEe-cCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEEcc----CCCceec
Q psy8894 81 EARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGP----NCPGIIA 152 (306)
Q Consensus 81 el~~~~~iDlavi~-vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~iiGP----Nc~Gi~~ 152 (306)
++.. .++|+.+=| +...-..+.++.+.+.+++.|+=.+-+....+..+ +-+++|+.++ | |+-|++.
T Consensus 317 ~i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~----iL~~rGI~~~-PD~~aNAGGV~v 387 (456)
T 3r3j_A 317 KPWN-IPCDIAFPCATQNEINENDADLFIQNKCKMIVEGANMPTHIKALH----KLKQNNIILC-PSKAANAGGVAV 387 (456)
T ss_dssp CGGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHH----HHHTTTCEEE-CHHHHTTHHHHH
T ss_pred cccc-cCccEEEeCCCccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHH----HHHHCCCEEe-ChHHhcCCceee
Confidence 2222 258999876 55566677888888888997654444543333333 3467786554 5 4445544
No 473
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=76.39 E-value=30 Score=33.19 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=40.4
Q ss_pred CCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCCc----eecCeeccC--CHHhhhhcCCCcEEEEe
Q psy8894 28 TSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGGK----THLDLPVFN--TVKEARDATGAEATVIY 94 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g~----~i~Gip~y~--sl~el~~~~~iDlavi~ 94 (306)
++.++|.|+|. |..|.. ..+.|.+.|+++. +.|-+.... +..|++++. +.+.+ . +.|++|+.
T Consensus 17 ~~~~~v~viGi-G~sG~s~~A~~l~~~G~~V~-~~D~~~~~~~~~l~~~gi~~~~g~~~~~~-~--~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGI-GGAGMGGIAEVLANEGYQIS-GSDLAPNPVTQQLMNLGATIYFNHRPENV-R--DASVVVVS 85 (491)
T ss_dssp TTCCEEEEETT-TSTTHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHHTTCEEESSCCGGGG-T--TCSEEEEC
T ss_pred ccCCEEEEEEc-CHHHHHHHHHHHHhCCCeEE-EECCCCCHHHHHHHHCCCEEECCCCHHHc-C--CCCEEEEC
Confidence 45678999999 999986 6788888999876 556543111 124666652 22333 2 37887764
No 474
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=76.32 E-value=4.8 Score=35.64 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=52.9
Q ss_pred cccccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCchhHHH
Q psy8894 23 PNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPGAAK 102 (306)
Q Consensus 23 ~~~~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~~~~~ 102 (306)
|.++-.+-|.+.|.|++.-+|+...+.|.+.|++++ ..+.+. .+ .+.+. .-+..+.+.++.+..
T Consensus 4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~-~~~r~~--~~-----------~~~~~--~~~~~Dv~~~~~v~~ 67 (261)
T 4h15_A 4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVL-TTARAR--PE-----------GLPEE--LFVEADLTTKEGCAI 67 (261)
T ss_dssp CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEE-EEESSC--CT-----------TSCTT--TEEECCTTSHHHHHH
T ss_pred hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEE-EEECCc--hh-----------CCCcE--EEEEcCCCCHHHHHH
Confidence 343334568899999999999999999999999976 444432 11 11111 223334566778888
Q ss_pred HHHHHHHc--CCCEEEE
Q psy8894 103 AIHEALDA--EMPLIVC 117 (306)
Q Consensus 103 ~~~e~~~~--Gi~~vvi 117 (306)
+++++.+. ++..+++
T Consensus 68 ~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 68 VAEATRQRLGGVDVIVH 84 (261)
T ss_dssp HHHHHHHHTSSCSEEEE
T ss_pred HHHHHHHHcCCCCEEEE
Confidence 88888874 5887765
No 475
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=76.26 E-value=5.1 Score=35.33 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=53.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhc-CCCc-EEEEecCchhHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDA-TGAE-ATVIYVPPPGAAKAIHE 106 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~-~~iD-lavi~vp~~~~~~~~~e 106 (306)
+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. +... .. .+++.+. ..+. +..+.+-++.+.+++++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~~--~~---~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVA-VAARHS--DALQ--VV---ADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESSG--GGGH--HH---HHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HH---HHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 457899999999999999999999999976 444432 1110 11 1222221 0122 22245666777788887
Q ss_pred HHHc--CCCEEEEecCCC
Q psy8894 107 ALDA--EMPLIVCITEGI 122 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t~Gf 122 (306)
+.+. ++..+++ ..|.
T Consensus 103 ~~~~~g~iD~lvn-nAg~ 119 (276)
T 3r1i_A 103 MTGELGGIDIAVC-NAGI 119 (276)
T ss_dssp HHHHHSCCSEEEE-CCCC
T ss_pred HHHHcCCCCEEEE-CCCC
Confidence 7765 6887775 5554
No 476
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=76.08 E-value=8.5 Score=32.72 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=27.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
+++.|.|+++..|+...+.|.+.|++++ .++.+
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~-~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVA-IASRN 35 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 6799999999999999999999999976 44433
No 477
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.96 E-value=5.7 Score=35.43 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=53.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~ 105 (306)
+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. +.. -...+++... ..++.. +.+-.+.+.++++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLV-LSDVDQ--PAL-----EQAVNGLRGQ-GFDAHGVVCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEECCH--HHH-----HHHHHHHHhc-CCceEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999999999976 444432 111 1112233221 223322 3456677777777
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|+
T Consensus 101 ~~~~~~g~id~lvn-nAg~ 118 (301)
T 3tjr_A 101 EAFRLLGGVDVVFS-NAGI 118 (301)
T ss_dssp HHHHHHSSCSEEEE-CCCC
T ss_pred HHHHhCCCCCEEEE-CCCc
Confidence 77764 6887765 6565
No 478
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=75.67 E-value=6.6 Score=33.68 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEE-EEecCchhHHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEAT-VIYVPPPGAAKAIHEA 107 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDla-vi~vp~~~~~~~~~e~ 107 (306)
+.+++.|.|+++..|+...+.|.+.|++++ .++.+. +... ...+++... +... .+...++.+.+.++++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~ 80 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAV-LLDLPN--SGGE-----AQAKKLGNN--CVFAPADVTSEKDVQTALALA 80 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECTT--SSHH-----HHHHHHCTT--EEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEeCCc--HhHH-----HHHHHhCCc--eEEEEcCCCCHHHHHHHHHHH
Confidence 357899999999999999999999999976 444332 1100 001222111 2221 1334556666667666
Q ss_pred HHc--CCCEEEEecCCC
Q psy8894 108 LDA--EMPLIVCITEGI 122 (306)
Q Consensus 108 ~~~--Gi~~vvi~t~Gf 122 (306)
.+. ++..+++ ..|.
T Consensus 81 ~~~~g~id~li~-~Ag~ 96 (265)
T 2o23_A 81 KGKFGRVDVAVN-CAGI 96 (265)
T ss_dssp HHHHSCCCEEEE-CCCC
T ss_pred HHHCCCCCEEEE-CCcc
Confidence 553 6887665 5554
No 479
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=75.62 E-value=3.8 Score=39.51 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=60.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC-----CCc-------------eecCee--ccCCHHhhhhcCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK-----GGK-------------THLDLP--VFNTVKEARDATGA 88 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~-----~g~-------------~i~Gip--~y~sl~el~~~~~i 88 (306)
+.++|+|.|. |+.|+...+.|.+.|.++++..|.+. .|- .+.+++ -|-+-+++.+ .++
T Consensus 234 ~g~~vaVqGf-GnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~-~~~ 311 (440)
T 3aog_A 234 EGARVAIQGF-GNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG-LPV 311 (440)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT-CCC
T ss_pred cCCEEEEecc-CHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc-CCC
Confidence 3589999997 99999999999999999987655431 010 011110 1112344443 358
Q ss_pred cEEEEecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 89 EATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 89 Dlavi~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
|+++-|...... ..+.+.+.+++.|+=.+-+....+..+ +-+++|+.++
T Consensus 312 DIlvPcA~~n~i--~~~na~~l~ak~VvEgAN~p~t~eA~~----iL~~~GI~~~ 360 (440)
T 3aog_A 312 EFLVPAALEKQI--TEQNAWRIRARIVAEGANGPTTPAADD----ILLEKGVLVV 360 (440)
T ss_dssp SEEEECSSSSCB--CTTTGGGCCCSEEECCSSSCBCHHHHH----HHHHHTCEEE
T ss_pred cEEEecCCcCcc--chhhHHHcCCcEEEecCccccCHHHHH----HHHHCCCEEE
Confidence 999988554322 123333447886553333433333333 3356776654
No 480
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=75.56 E-value=2.3 Score=36.37 Aligned_cols=87 Identities=10% Similarity=0.074 Sum_probs=50.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE-Ee--cCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV-IY--VPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav-i~--vp~~~~~~~~~ 105 (306)
+.+++.|.|+++..|+...+.|.+.|++++ .++.+. +... .....+.+.... .+.+.. .+ +-.+.+..+++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~~~--~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVV-LLGRTE--ASLA--EVSDQIKSAGQP-QPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH--HHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEecCH--HHHH--HHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHH
Confidence 467899999999999999999999999976 444432 1110 111111111111 122221 12 44456666667
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|+
T Consensus 87 ~~~~~~g~id~lv~-nAg~ 104 (247)
T 3i1j_A 87 RVEHEFGRLDGLLH-NASI 104 (247)
T ss_dssp HHHHHHSCCSEEEE-CCCC
T ss_pred HHHHhCCCCCEEEE-CCcc
Confidence 66654 6887765 5554
No 481
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=75.36 E-value=1.9 Score=37.25 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=51.1
Q ss_pred ccCCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHH
Q psy8894 26 RLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAK 102 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~ 102 (306)
...+.++|.|.|+++-.|+...+.|.+.|++++...++.. ... -..++++.+. ..++.. +.+..+.+..
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~--~~~-----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~ 80 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRR-----VKWLEDQKAL-GFDFYASEGNVGDWDSTKQ 80 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTC--SSH-----HHHHHHHHHT-TCCCEEEECCTTCHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH--HHH-----HHHHHHHHhc-CCeeEEEecCCCCHHHHHH
Confidence 4456789999999999999999999999999764443432 110 0112222211 122221 3455566777
Q ss_pred HHHHHHHc--CCCEEEEecCCC
Q psy8894 103 AIHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 103 ~~~e~~~~--Gi~~vvi~t~Gf 122 (306)
.++++.+. ++..+++ ..|.
T Consensus 81 ~~~~~~~~~g~id~lv~-~Ag~ 101 (256)
T 3ezl_A 81 AFDKVKAEVGEIDVLVN-NAGI 101 (256)
T ss_dssp HHHHHHHHTCCEEEEEE-CCCC
T ss_pred HHHHHHHhcCCCCEEEE-CCCC
Confidence 77777664 4665554 5554
No 482
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=75.27 E-value=4.2 Score=40.04 Aligned_cols=35 Identities=14% Similarity=0.006 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
..+|.|+|+ |-.|..+.++|...|..-+..+|+..
T Consensus 32 ~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred cCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 478999999 88999999999999998666888764
No 483
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=75.13 E-value=5 Score=36.29 Aligned_cols=86 Identities=17% Similarity=0.049 Sum_probs=50.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCe-EEEeeCC--CCCCceecC--------------eeccCCHHhhhhcCCCcEEEE
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTK-VVGGVSP--GKGGKTHLD--------------LPVFNTVKEARDATGAEATVI 93 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~-vv~~VnP--~~~g~~i~G--------------ip~y~sl~el~~~~~iDlavi 93 (306)
++|+|+||+|..|+.....+...+.. -+..+|. .. +...+ ..+..+-.+..+ +.|++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~--~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~--~aDvVi~ 76 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE--DDTVGQAADTNHGIAYDSNTRVRQGGYEDTA--GSDVVVI 76 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH--HHHHHHHHHHHHHHTTTCCCEEEECCGGGGT--TCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh--hhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC--CCCEEEE
Confidence 47999998899998877777666542 2336665 32 11111 111111112222 4899998
Q ss_pred ecCc----------------hhHHHHHHHHHHcCCCEEEEecC
Q psy8894 94 YVPP----------------PGAAKAIHEALDAEMPLIVCITE 120 (306)
Q Consensus 94 ~vp~----------------~~~~~~~~e~~~~Gi~~vvi~t~ 120 (306)
+... +...++++.+.+.+.+.++++.+
T Consensus 77 ~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 7542 23556777888888887776654
No 484
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.04 E-value=7.6 Score=33.55 Aligned_cols=86 Identities=14% Similarity=0.158 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHH
Q psy8894 28 TSKSKVICQGFTG-KQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKA 103 (306)
Q Consensus 28 ~~~~~VaVvGasg-~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~ 103 (306)
.+.+++.|.|++| ..|+...+.|.+.|++++ .++.+. +.. -...+++.+....++.. +.+-++.+.++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~ 91 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVV-ISDYHE--RRL-----GETRDQLADLGLGRVEAVVCDVTSTEAVDAL 91 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEE-EecCCH--HHH-----HHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence 3468899999987 599999999999999976 444432 111 01122222211122222 34566777777
Q ss_pred HHHHHHc--CCCEEEEecCCC
Q psy8894 104 IHEALDA--EMPLIVCITEGI 122 (306)
Q Consensus 104 ~~e~~~~--Gi~~vvi~t~Gf 122 (306)
++++.+. .+..+++ ..|+
T Consensus 92 ~~~~~~~~g~id~li~-~Ag~ 111 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVN-NAGL 111 (266)
T ss_dssp HHHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHHhCCCcEEEE-CCCc
Confidence 8777765 6887665 6665
No 485
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=74.82 E-value=5.8 Score=38.72 Aligned_cols=82 Identities=12% Similarity=0.040 Sum_probs=48.3
Q ss_pred ccCCCcEEEEEcCCCCCChH-HHHHHHHcCCeEEEeeCCCCCCc-----eecCeeccC--CHHhhhhcCCCcEEEEe--c
Q psy8894 26 RLTSKSKVICQGFTGKQGTF-HSKQAIEYGTKVVGGVSPGKGGK-----THLDLPVFN--TVKEARDATGAEATVIY--V 95 (306)
Q Consensus 26 ~~~~~~~VaVvGasg~~G~~-~~~~l~~~g~~vv~~VnP~~~g~-----~i~Gip~y~--sl~el~~~~~iDlavi~--v 95 (306)
+..+.++|-++|. |..|-. +.+.|.+.|+++. +.|.+.... +..|++++. +-+++... +|++|+. +
T Consensus 15 ~~~~~~~i~~iGi-Gg~Gms~lA~~l~~~G~~V~-~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~--~d~vV~Spgi 90 (524)
T 3hn7_A 15 LYFQGMHIHILGI-CGTFMGSLALLARALGHTVT-GSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPA--PDLVVVGNAM 90 (524)
T ss_dssp ----CCEEEEETT-TSHHHHHHHHHHHHTTCEEE-EEESCCCTTHHHHHHHTTCEEEESCCGGGGCSC--CSEEEECTTC
T ss_pred eeecCCEEEEEEe-cHhhHHHHHHHHHhCCCEEE-EECCCCCcHHHHHHHHCCCEEECCCCHHHcCCC--CCEEEECCCc
Confidence 3445789999999 777754 4667788899976 655442111 124777763 33445433 8998875 4
Q ss_pred CchhHHHHHHHHHHcCCC
Q psy8894 96 PPPGAAKAIHEALDAEMP 113 (306)
Q Consensus 96 p~~~~~~~~~e~~~~Gi~ 113 (306)
|+. -+.++++.++|++
T Consensus 91 ~~~--~p~l~~a~~~gi~ 106 (524)
T 3hn7_A 91 KRG--MDVIEYMLDTGLR 106 (524)
T ss_dssp CTT--SHHHHHHHHHTCC
T ss_pred CCC--CHHHHHHHHCCCc
Confidence 433 2334556666655
No 486
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=74.63 E-value=6.8 Score=37.49 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCC-------CCCC-ce------ecC-eeccC-CHHhhhhcCCCcEEE
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSP-------GKGG-KT------HLD-LPVFN-TVKEARDATGAEATV 92 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP-------~~~g-~~------i~G-ip~y~-sl~el~~~~~iDlav 92 (306)
+.++|+|.|. |+.|+...+.|.+.|.++++..|. +..- ++ ..| +.-|. +-+++.. .++|+++
T Consensus 217 ~gk~vaVqG~-GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~-~~~DVli 294 (419)
T 3aoe_E 217 RGARVVVQGL-GQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFG-LEAEVLV 294 (419)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGG-SSCSEEE
T ss_pred cCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhc-cCceEEE
Confidence 3589999997 999999999999999998876444 3100 00 011 11110 1123332 2589999
Q ss_pred EecCchhHHHHHHHHHHcCCCEEEEecCCCChhHHHHHHHHHHHhcCCeEE
Q psy8894 93 IYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLI 143 (306)
Q Consensus 93 i~vp~~~~~~~~~e~~~~Gi~~vvi~t~Gf~e~~~~~~~~~~ar~~gi~ii 143 (306)
-|......- .+.+...+++.|+=.+-+....+..+ +-+++|+.++
T Consensus 295 P~A~~n~i~--~~~A~~l~ak~V~EgAN~p~t~~A~~----~L~~~Gi~~~ 339 (419)
T 3aoe_E 295 LAAREGALD--GDRARQVQAQAVVEVANFGLNPEAEA----YLLGKGALVV 339 (419)
T ss_dssp ECSCTTCBC--HHHHTTCCCSEEEECSTTCBCHHHHH----HHHHHTCEEE
T ss_pred ecccccccc--cchHhhCCceEEEECCCCcCCHHHHH----HHHHCCCEEE
Confidence 886543332 24444558886664444443333333 3466787665
No 487
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=74.54 E-value=4.6 Score=34.65 Aligned_cols=84 Identities=19% Similarity=0.170 Sum_probs=51.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~ 105 (306)
+.+++.|.|+++..|+...+.|.+.|++++ .++.+. +... .. .+++.+. ..++.. +.+.++.+...++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~-~~~r~~--~~~~--~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVV-VADINA--EAAE--AV---AKQIVAD-GGTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH--HH---HHHHHHT-TCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEcCCH--HHHH--HH---HHHHHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence 357899999999999999999999999976 444432 1110 01 1222211 122222 3455666777777
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|.
T Consensus 79 ~~~~~~g~id~li~-~Ag~ 96 (253)
T 3qiv_A 79 RTLAEFGGIDYLVN-NAAI 96 (253)
T ss_dssp HHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHcCCCCEEEE-CCCc
Confidence 77664 6887765 5555
No 488
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=74.24 E-value=6.1 Score=33.91 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=49.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCe-EEEeeCCCCCCceecCeeccCCHHhhhhcC-CCcEEE---EecCc-hhHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTK-VVGGVSPGKGGKTHLDLPVFNTVKEARDAT-GAEATV---IYVPP-PGAAKA 103 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~-vv~~VnP~~~g~~i~Gip~y~sl~el~~~~-~iDlav---i~vp~-~~~~~~ 103 (306)
.+++.|.|+++-.|+...+.|.+.|++ ++ .++.+. .. ..++++.+.. ..++.. +.+.+ +.+.+.
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~-~~~r~~--~~-------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFV-ILDRVE--NP-------TALAELKAINPKVNITFHTYDVTVPVAESKKL 74 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEE-EEESSC--CH-------HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEE-EEecCc--hH-------HHHHHHHHhCCCceEEEEEEecCCChHHHHHH
Confidence 478999999999999999999999997 54 454432 11 1122332210 122222 23334 566667
Q ss_pred HHHHHHc--CCCEEEEecCCCC
Q psy8894 104 IHEALDA--EMPLIVCITEGIP 123 (306)
Q Consensus 104 ~~e~~~~--Gi~~vvi~t~Gf~ 123 (306)
++++.+. ++..+++ ..|+.
T Consensus 75 ~~~~~~~~g~id~lv~-~Ag~~ 95 (254)
T 1sby_A 75 LKKIFDQLKTVDILIN-GAGIL 95 (254)
T ss_dssp HHHHHHHHSCCCEEEE-CCCCC
T ss_pred HHHHHHhcCCCCEEEE-CCccC
Confidence 7766654 6887665 55653
No 489
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=73.75 E-value=3 Score=39.45 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
.+.+|+|+|+ |..|....+.++..|.+++ .+|++.
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~-v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVR-AFDTRP 205 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCH
Confidence 5789999999 9999999999999999754 677653
No 490
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=73.68 E-value=7.3 Score=35.15 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=44.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
+-+++.|+|+|+-.|+...+.|.+.|.++. ..|.+ -.++++...+ .|++|-+++..
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt-v~~~~-----------t~~L~~~~~~--ADIVI~Avg~p 204 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVS-VCHSK-----------TKDIGSMTRS--SKIVVVAVGRP 204 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTT-----------CSCHHHHHHH--SSEEEECSSCT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEE-EEeCC-----------cccHHHhhcc--CCEEEECCCCC
Confidence 468999999988899999999999999864 55543 1457777766 89999998764
No 491
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=73.62 E-value=2.4 Score=34.97 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=26.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPG 64 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~ 64 (306)
++|.|.|++|..|+...+.|. .|++++ .++.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~-~~~r~ 35 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVI-TAGRH 35 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEE-EEESS
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEE-EEecC
Confidence 479999999999999999988 899976 44443
No 492
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=73.58 E-value=4.3 Score=38.26 Aligned_cols=72 Identities=10% Similarity=-0.069 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCCCCh---------HHHHHHHHcCCeEEEeeCCCCCCc-eecCeeccCCHHhhhhcCCCcEEEEecCch
Q psy8894 29 SKSKVICQGFTGKQGT---------FHSKQAIEYGTKVVGGVSPGKGGK-THLDLPVFNTVKEARDATGAEATVIYVPPP 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~---------~~~~~l~~~g~~vv~~VnP~~~g~-~i~Gip~y~sl~el~~~~~iDlavi~vp~~ 98 (306)
+.++|+|.|.+=|++. .+.+.|++.|.++. ..||..... +..+.....+++++.+. .|++|+.+..+
T Consensus 308 ~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~-~~DP~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~~~~h~ 384 (402)
T 1dlj_A 308 PVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKII-IYEPMLNKLESEDQSVLVNDLENFKKQ--ANIIVTNRYDN 384 (402)
T ss_dssp SSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEE-EECTTCSCCCTTCCSEECCCHHHHHHH--CSEEECSSCCG
T ss_pred CCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEE-EECCCCChHHHHcCCeecCCHHHHHhC--CcEEEEecCCh
Confidence 5789999999877764 23678888898865 788854111 22344444678887665 89999988877
Q ss_pred hHHHH
Q psy8894 99 GAAKA 103 (306)
Q Consensus 99 ~~~~~ 103 (306)
...++
T Consensus 385 ~~~~~ 389 (402)
T 1dlj_A 385 ELQDV 389 (402)
T ss_dssp GGGGG
T ss_pred HHHHH
Confidence 65443
No 493
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=73.34 E-value=12 Score=34.03 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=52.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHcC--CeEEEeeCCCC-CCc--eec------Ceecc---CCHHhhhhcCCCcEEEEecC
Q psy8894 31 SKVICQGFTGKQGTFHSKQAIEYG--TKVVGGVSPGK-GGK--THL------DLPVF---NTVKEARDATGAEATVIYVP 96 (306)
Q Consensus 31 ~~VaVvGasg~~G~~~~~~l~~~g--~~vv~~VnP~~-~g~--~i~------Gip~y---~sl~el~~~~~iDlavi~vp 96 (306)
++|+|+|++|..|......|...+ .+++ .+|... .+. ++. .+..+ .++++.... .|+++++..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~-L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~--aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLT-LYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKG--CDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEE-EEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTT--CSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEE-EEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCC--CCEEEECCC
Confidence 379999999999998777777666 3443 554432 111 111 12222 246654443 899999853
Q ss_pred --c--------------hhHHHHHHHHHHcCCCEEEEecCC
Q psy8894 97 --P--------------PGAAKAIHEALDAEMPLIVCITEG 121 (306)
Q Consensus 97 --~--------------~~~~~~~~e~~~~Gi~~vvi~t~G 121 (306)
. ....++++.+.+.+.++.+++.+.
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 2 235566677777776655555544
No 494
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=73.34 E-value=38 Score=28.78 Aligned_cols=81 Identities=9% Similarity=0.082 Sum_probs=48.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCC--eEEEeeCCCCCCceecCeec-----cCCHHhhhhcCCCcEEEEecCchhHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGT--KVVGGVSPGKGGKTHLDLPV-----FNTVKEARDATGAEATVIYVPPPGAA 101 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~--~vv~~VnP~~~g~~i~Gip~-----y~sl~el~~~~~iDlavi~vp~~~~~ 101 (306)
.|+||+..+. ...+.+...|. ++|+.-+....-....++|. .++++.+..- +||+++..... ...
T Consensus 1 ~P~RIv~l~~------~~~e~l~aLG~~d~iVg~~~~~~~p~~~~~~p~vg~~~~~n~E~i~~l-~PDlIi~~~~~-~~~ 72 (255)
T 3md9_A 1 MAERIVTIGG------DVTEIAYALGAGDEIVARDSTSQQPQAAQKLPDVGYMRTLNAEGILAM-KPTMLLVSELA-QPS 72 (255)
T ss_dssp -CCCEEEESH------HHHHHHHHTTCGGGEEEECTTCCCSGGGGGSCBCCCTTSCCHHHHHTT-CCSEEEEETTC-SCH
T ss_pred CCceEEECCc------cHHHHHHHcCCCCcEEEecCCCCCcHHHhcCCccCCCCCCCHHHHHcc-CCCEEEEcCCc-Cch
Confidence 3788888764 35667777777 57754222111111233332 3478888763 69999876432 224
Q ss_pred HHHHHHHHcCCCEEEE
Q psy8894 102 KAIHEALDAEMPLIVC 117 (306)
Q Consensus 102 ~~~~e~~~~Gi~~vvi 117 (306)
+..+.+.+.|++.+.+
T Consensus 73 ~~~~~L~~~gipvv~~ 88 (255)
T 3md9_A 73 LVLTQIASSGVNVVTV 88 (255)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHcCCcEEEe
Confidence 6677888889997664
No 495
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=73.22 E-value=2.3 Score=37.15 Aligned_cols=87 Identities=17% Similarity=0.185 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhc-CCCcEE-EEecCchhHHHHHH
Q psy8894 28 TSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDA-TGAEAT-VIYVPPPGAAKAIH 105 (306)
Q Consensus 28 ~~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~-~~iDla-vi~vp~~~~~~~~~ 105 (306)
.+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. .+... ..+.++... ..+... .+.+.++.+.++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~-~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVA-VSHSER-NDHVS-----TWLMHERDAGRDFKAYAVDVADFESCERCAE 95 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEE-EEECSC-HHHHH-----HHHHHHHTTTCCCEEEECCTTCHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEcCCc-hHHHH-----HHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3457789999999999999999999999976 333221 01110 001122111 012222 24456677777777
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|+
T Consensus 96 ~~~~~~g~id~li~-nAg~ 113 (269)
T 3gk3_A 96 KVLADFGKVDVLIN-NAGI 113 (269)
T ss_dssp HHHHHHSCCSEEEE-CCCC
T ss_pred HHHHHcCCCCEEEE-CCCc
Confidence 77765 6887665 5554
No 496
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=73.02 E-value=2.4 Score=37.17 Aligned_cols=84 Identities=20% Similarity=0.229 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHHH
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIHE 106 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~e 106 (306)
.+++.|.|+++-.|+...+.|.+.|++++....... +... .. .+++.+ .+.++.. +.+.++.+.+++++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~--~~~~--~~---~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST--KDAE--KV---VSEIKA-LGSDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHH--HH---HHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHH--HH---HHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 578999999999999999999999999763322221 1100 01 122221 1223322 34556677777777
Q ss_pred HHHc--CCCEEEEecCCC
Q psy8894 107 ALDA--EMPLIVCITEGI 122 (306)
Q Consensus 107 ~~~~--Gi~~vvi~t~Gf 122 (306)
+.+. ++..+++ ..|.
T Consensus 90 ~~~~~g~id~lvn-nAg~ 106 (270)
T 3is3_A 90 AVAHFGHLDIAVS-NSGV 106 (270)
T ss_dssp HHHHHSCCCEEEC-CCCC
T ss_pred HHHHcCCCCEEEE-CCCC
Confidence 7664 6776664 5554
No 497
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=73.00 E-value=6.1 Score=37.96 Aligned_cols=79 Identities=8% Similarity=-0.040 Sum_probs=53.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCcee------cCeeccC---CHHhhhhcCCCcEEEEecCch-
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTH------LDLPVFN---TVKEARDATGAEATVIYVPPP- 98 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i------~Gip~y~---sl~el~~~~~iDlavi~vp~~- 98 (306)
+.++|.|+|. |+.|..-.+.|++.|.++. .|+|+.. .++ .++.+.. .-+++. +.|++|.++..+
T Consensus 11 ~~~~vlVvGg-G~va~~k~~~L~~~ga~V~-vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l~---~~~lVi~at~~~~ 84 (457)
T 1pjq_A 11 RDRDCLIVGG-GDVAERKARLLLEAGARLT-VNALTFI-PQFTVWANEGMLTLVEGPFDETLLD---SCWLAIAATDDDT 84 (457)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBEEE-EEESSCC-HHHHHHHTTTSCEEEESSCCGGGGT---TCSEEEECCSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCcCEEE-EEcCCCC-HHHHHHHhcCCEEEEECCCCccccC---CccEEEEcCCCHH
Confidence 3578999999 8777777889999998865 7787642 111 1333221 123443 379988877665
Q ss_pred hHHHHHHHHHHcCCC
Q psy8894 99 GAAKAIHEALDAEMP 113 (306)
Q Consensus 99 ~~~~~~~e~~~~Gi~ 113 (306)
.-..+.++|.+.|+.
T Consensus 85 ~n~~i~~~a~~~~i~ 99 (457)
T 1pjq_A 85 VNQRVSDAAESRRIF 99 (457)
T ss_dssp HHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCE
Confidence 356778888888876
No 498
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=72.82 E-value=8.5 Score=38.62 Aligned_cols=35 Identities=29% Similarity=0.505 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCC
Q psy8894 30 KSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGK 65 (306)
Q Consensus 30 ~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~ 65 (306)
..+|+|+|+ |..|..+.++|...|..-+..||+..
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 578999999 88999999999999998666888865
No 499
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=72.80 E-value=12 Score=32.09 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=50.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEE-EEecCchhHHHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEAT-VIYVPPPGAAKAIHEA 107 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDla-vi~vp~~~~~~~~~e~ 107 (306)
+.+++.|.|+++-.|+...+.|.+.|++++ .++.+. +... .. .+++..+ +... .+.+-++.+.++++++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~--~~---~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~ 75 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVL-GLDLKP--PAGE--EP---AAELGAA--VRFRNADVTNEADATAALAFA 75 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESSC--C-------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCh--HHHH--HH---HHHhCCc--eEEEEccCCCHHHHHHHHHHH
Confidence 357899999999999999999999999976 444332 1110 01 1122211 2222 2445667777788877
Q ss_pred HHc--CCCEEEEecCCC
Q psy8894 108 LDA--EMPLIVCITEGI 122 (306)
Q Consensus 108 ~~~--Gi~~vvi~t~Gf 122 (306)
.+. ++..+++ ..|.
T Consensus 76 ~~~~g~id~lv~-nAg~ 91 (257)
T 3tpc_A 76 KQEFGHVHGLVN-CAGT 91 (257)
T ss_dssp HHHHSCCCEEEE-CCCC
T ss_pred HHHcCCCCEEEE-CCCC
Confidence 765 6887765 5554
No 500
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=72.77 E-value=2.4 Score=37.17 Aligned_cols=85 Identities=18% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHcCCeEEEeeCCCCCCceecCeeccCCHHhhhhcCCCcEEE---EecCchhHHHHHH
Q psy8894 29 SKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATV---IYVPPPGAAKAIH 105 (306)
Q Consensus 29 ~~~~VaVvGasg~~G~~~~~~l~~~g~~vv~~VnP~~~g~~i~Gip~y~sl~el~~~~~iDlav---i~vp~~~~~~~~~ 105 (306)
+.++|.|.|+++..|+...+.|.+.|++++ .+..+. .+. -..+.+..+....++.+ +.+..+.+.+.++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVW-INYRSN--AEV-----ADALKNELEEKGYKAAVIKFDAASESDFIEAIQ 99 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEESSC--HHH-----HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeCCC--HHH-----HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 357899999999999999999999999976 333321 110 01111111111223332 3455666777777
Q ss_pred HHHHc--CCCEEEEecCCC
Q psy8894 106 EALDA--EMPLIVCITEGI 122 (306)
Q Consensus 106 e~~~~--Gi~~vvi~t~Gf 122 (306)
++.+. ++..+++ ..|+
T Consensus 100 ~~~~~~g~id~li~-nAg~ 117 (271)
T 4iin_A 100 TIVQSDGGLSYLVN-NAGV 117 (271)
T ss_dssp HHHHHHSSCCEEEE-CCCC
T ss_pred HHHHhcCCCCEEEE-CCCc
Confidence 77664 6887665 5555
Done!