RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8894
(306 letters)
>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain,
N-terminal (CoA-binding) domain {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 130
Score = 178 bits (454), Expect = 3e-57
Identities = 95/128 (74%), Positives = 113/128 (88%)
Query: 18 YAATRPNLRLTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFN 77
Y A+R +L + +KVICQGFTGKQGTFHS+QA+EYGT +VGG +PGKGGKTHL LPVFN
Sbjct: 3 YTASRKHLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFN 62
Query: 78 TVKEARDATGAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQ 137
TVKEA++ TGA A+VIYVPPP AA AI+EA+DAE+PL+VCITEGIPQ DMV+VKHRL+RQ
Sbjct: 63 TVKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQ 122
Query: 138 SKSRLIGP 145
K+RLIGP
Sbjct: 123 GKTRLIGP 130
>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain,
N-terminal (CoA-binding) domain {Escherichia coli
[TaxId: 562]}
Length = 119
Score = 157 bits (398), Expect = 5e-49
Identities = 76/118 (64%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 27 LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDAT 86
+ +KVICQGFTG QGTFHS+QAI YGTK+VGGV+PGKGG THL LPVFNTV+EA AT
Sbjct: 3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAAT 62
Query: 87 GAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144
GA A+VIYVP P +I EA+DA + LI+ ITEGIP LDM+ VK +L ++ R+IG
Sbjct: 63 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKL-DEAGVRMIG 119
>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain,
N-terminal (CoA-binding) domain {Thermus thermophilus
[TaxId: 274]}
Length = 121
Score = 155 bits (394), Expect = 2e-48
Identities = 60/118 (50%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Query: 27 LTSKSKVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDAT 86
+ +++V+ QG TG++G FH+KQ + YGTK+V GV+PGKGG L +PV++TVKEA
Sbjct: 4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHH 63
Query: 87 GAEATVIYVPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIG 144
+A++I+VP P AA A EA A +PLIV ITEGIP LDMV+ + + SRLIG
Sbjct: 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEI-KALGSRLIG 120
>d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 176
Score = 138 bits (348), Expect = 6e-41
Identities = 121/175 (69%), Positives = 144/175 (82%), Gaps = 15/175 (8%)
Query: 146 NCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDP 205
NCPG+I P +CKIGIMPGHIH++G +G+VSRSGTLTYEAVHQTTQVGLGQ+LCVGIGGDP
Sbjct: 1 NCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDP 60
Query: 206 FNGTNFIDCLEVFLKDPETKGIILIGEIGG---------------GPNAKPVVSFIAGIT 250
FNGT+F DCLE+FL DP T+GIILIGEIGG GP +KPVVSFIAG+T
Sbjct: 61 FNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLT 120
Query: 251 APPGRRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKEMKRLNL 305
APPGRRMGHAGAII+GGKGGA++KI AL+ AGV+V+ SPAQ+G + KE ++ +
Sbjct: 121 APPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKM 175
>d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 166
Score = 126 bits (318), Expect = 1e-36
Identities = 102/165 (61%), Positives = 119/165 (72%), Gaps = 12/165 (7%)
Query: 146 NCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDP 205
N PG+I P +CKIGI PGHIH+ G VG+VSRSGTLTYEAV QTT G GQ+ CVGIGGDP
Sbjct: 1 NSPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDP 60
Query: 206 FNGTNFIDCLEVFLKDPETKGIILIGEIGGGPNA-----------KPVVSFIAGITAPPG 254
G+NFID LE+F KDP+T+ I++IGEIGG KPVV +IAG+TAP G
Sbjct: 61 IPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKG 120
Query: 255 RRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKE 299
+RMGHAGAII+GGKG A +K ALE AGV RS A +G E LK
Sbjct: 121 KRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIG-EALKT 164
>d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain,
C-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 167
Score = 123 bits (310), Expect = 2e-35
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 12/165 (7%)
Query: 146 NCPGIIAPEQCKIGIMPGHIHQRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDP 205
NCPGII+ E+ KIGIMPGH+ +RG VG++SRSGTLTYEA +Q GLG T VGIGGDP
Sbjct: 1 NCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDP 60
Query: 206 FNGTNFIDCLEVFLKDPETKGIILIGEIGGGP-----------NAKPVVSFIAGITAPPG 254
GT F D L +F +DPET+ ++LIGEIGG KPVV FI G +AP G
Sbjct: 61 VIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHMKKPVVGFIGGRSAPKG 120
Query: 255 RRMGHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGNELLKE 299
+RMGHAGAII G G + K+ A +AG+ V + ++ EL+K+
Sbjct: 121 KRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIV-ELVKK 164
>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA,
domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Length = 161
Score = 94.7 bits (235), Expect = 2e-24
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 158 IGIMPGHIH---------QRGCVGVVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNG 208
+GIM H+ ++G V +S+SG L V++T + +G + + +G
Sbjct: 1 VGIMNTHVDLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMAD-- 58
Query: 209 TNFIDCLEVFLKDPETKGIILIGEIGGGP-----------NAKPVVSFIAGITAPPGRRM 257
+F + +E E K I L E KP+++ AG + R
Sbjct: 59 VDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKKKPIIALKAGKSESGARAA 118
Query: 258 GHAGAIISGGKGGAQDKIDALEKAGVIVTRSPAQMGN 294
++ G + A +++GV+V + +M +
Sbjct: 119 SSHTGSLA---GSWKIYEAAFKQSGVLVANTIDEMLS 152
>d3c2wa1 d.110.2.1 (A:118-309) Bacteriophytochrome BphP {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 192
Score = 34.6 bits (79), Expect = 0.006
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 70 HLDLP-VFNT-VKEARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLD 126
H D + + E R TG + + Y + + + E+ ++ + + P D
Sbjct: 20 HNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLE--SYLGQRYPASD 77
Query: 127 MVKVKHRLIRQSKSRLI 143
+ RL Q+ RLI
Sbjct: 78 IPAQARRLYIQNPIRLI 94
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus
thermophilus [TaxId: 274]}
Length = 136
Score = 32.4 bits (73), Expect = 0.023
Identities = 15/112 (13%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 39 TGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP 98
+ + + E G +V+ V+P G+ ++ + ++ + ++ PP
Sbjct: 25 PSRPAHYVPRYLREQGYRVLP-VNPRFQGEELFGEEAVASLLDLKEPV--DILDVFRPPS 81
Query: 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGI 150
+ E L L+ + GI + K ++++ ++ C +
Sbjct: 82 ALMDHLPEVLALRPGLVW-LQSGIRHPEFEK----ALKEAGIPVVADRCLMV 128
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA,
N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 129
Score = 31.9 bits (72), Expect = 0.034
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 9/113 (7%)
Query: 40 GKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG 99
K G K EY V V+ + + + +VK+ D + +I VP
Sbjct: 21 KKLGYEVFKNLKEYKKGKVYPVNIK--EEEVQGVKAYKSVKDIPDEI--DLAIIVVPKRF 76
Query: 100 AAKAIHEALDAEMPLIVCITEGIPQLDMVKVKH-----RLIRQSKSRLIGPNC 147
+ + + + +V IT G + + + + R+IGPNC
Sbjct: 77 VKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNC 129
>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA,
domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Length = 163
Score = 31.6 bits (71), Expect = 0.065
Identities = 13/87 (14%), Positives = 25/87 (28%)
Query: 203 GDPFNGTNFIDCLEVFLKDPETKGIILIGEIGGGPNAKPVVSFIAGITAPPGRRMGHAGA 262
G ++ ++ L+DP +I I + I A
Sbjct: 58 IASARGEDYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVL 117
Query: 263 IISGGKGGAQDKIDALEKAGVIVTRSP 289
+ ++ + LEK G+ P
Sbjct: 118 AMFMAGYVSEKAKELLEKNGIPTYERP 144
>d2k2na1 d.110.2.1 (A:31-200) Sensor protein CYB2465 {Synechococcus
sp. [TaxId: 1131]}
Length = 170
Score = 30.5 bits (68), Expect = 0.16
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 78 TVKEARDATGAEATVIY-VPPPGAAKAIHEALDAE-MPLIVCITEGIPQLDMVKVKHRLI 135
TV+E R G + +Y P G + EA E +P ++ +T P D+ + RL
Sbjct: 8 TVEEVRAFLGTDRVKVYRFDPEGHGTVVAEARGGERLPSLLGLT--FPAGDIPEEARRLF 65
Query: 136 RQSKSRLI 143
R ++ R+I
Sbjct: 66 RLAQVRVI 73
>d2oola1 d.110.2.1 (A:140-333) Sensor protein PhyB2
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 194
Score = 30.4 bits (68), Expect = 0.17
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 71 LDLP-VFNT-VKEARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLDM 127
DLP E R TG + +Y + + I E D+ +P ++ P D+
Sbjct: 21 ADLPTACWIAASEVRRITGFDRIKVYQFAADWSGQVIAEDRDSGIPSLLDFH--FPSSDI 78
Query: 128 VKVKHRLIRQSKSRLI 143
L + R+I
Sbjct: 79 PAQSRALYTINPVRII 94
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 116
Score = 28.5 bits (63), Expect = 0.50
Identities = 14/111 (12%), Positives = 35/111 (31%), Gaps = 10/111 (9%)
Query: 40 GKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPPG 99
K G K + G +V+ V+P + ++ + R+ +++V PP
Sbjct: 14 AKYGNIILKDLLSKGFEVLP-VNP-----NYDEIEGLKCYRSVRELPKDVDVIVFVVPPK 67
Query: 100 AAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGI 150
+ + + G ++ R + ++ C +
Sbjct: 68 VGLQVAKEAVEAGFKKLWFQPGAESEEIR----RFLEKAGVEYSFGRCIMV 114
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 139
Score = 28.4 bits (63), Expect = 0.56
Identities = 13/112 (11%), Positives = 34/112 (30%), Gaps = 10/112 (8%)
Query: 39 TGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEATVIYVPPP 98
+ K +E+G V V+P + L + +V E ++V P
Sbjct: 31 PERDANIVMKYLLEHGYDVYP-VNPK--YEEVLGRKCYPSVL--DIPDKIEVVDLFVKPK 85
Query: 99 GAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIRQSKSRLIGPNCPGI 150
+ + +A+ ++ + + ++ ++ C
Sbjct: 86 LTMEYVEQAIKKGAKVVWFQYNTYNREAS-----KKADEAGLIIVANRCMMR 132
>d2o9ca1 d.110.2.1 (A:135-321) Bacteriophytochrome BphP {Deinococcus
radiodurans [TaxId: 1299]}
Length = 187
Score = 28.4 bits (63), Expect = 0.76
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 78 TVKEARDATGAEATVIY-VPPPGAAKAIHEALDAEMPLIVCITEGIPQLDMVKVKHRLIR 136
+ R+ TG + ++Y P + I EA + + P D+ L
Sbjct: 26 ATQTVRELTGFDRVMLYKFAPDATGEVIAEARREGLH--AFLGHRFPASDIPAQARALYT 83
Query: 137 QSKSRLI 143
+ RL
Sbjct: 84 RHLLRLT 90
>d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga
maritima [TaxId: 2336]}
Length = 338
Score = 27.9 bits (62), Expect = 1.4
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 25 LRLTSKSKVICQGFTGKQGTFHSKQA---IEYGT--KVVGGVSPGKGGK-------THLD 72
+ + + ++ G G T H+K + + K V V+ +G D
Sbjct: 7 YQPGTPAAIVAWGQLG---TAHAKTTYGLLRHSRLFKPVCVVAEHEGKMASDFVKPVRYD 63
Query: 73 LPVFNTVKEARDATGAEATVIYVPPPGAA------KAIHEALDAEMPLI 115
+PV ++V++A++ GAE +I V PG + +AL M +I
Sbjct: 64 VPVVSSVEKAKEM-GAEVLIIGVSNPGGYLEEQIATLVKKALSLGMDVI 111
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid
dehydrogenase, Pyr module {Thermus thermophilus [TaxId:
274]}
Length = 186
Score = 26.3 bits (57), Expect = 3.4
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 101 AKAIHEALDAEM---PLIVCITEGI 122
+A++ ALD EM P +V + E +
Sbjct: 6 VQALNRALDEEMAKDPRVVVLGEDV 30
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 253
Score = 26.5 bits (57), Expect = 4.3
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 260 AGAIISGGKGGAQD-KIDALEKAGVIVTRSPAQMGNELLKEMKR 302
AGAI+ G + A EK +I + ++ +L+ +++
Sbjct: 211 AGAIVKDLDGKDVEITFSATEKVNIIAANNE-ELLETILRSIEK 253
>d3b48a1 c.54.1.2 (A:1-132) Uncharacterized protein EF1359
{Enterococcus faecalis [TaxId: 1351]}
Length = 132
Score = 25.3 bits (55), Expect = 6.1
Identities = 9/81 (11%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 173 VVSRSGTLTYEAVHQTTQVGLGQTLCVGIGG---DPFNGTNFIDCLEVFLKDPETKGIIL 229
+VS S +T Q+ + + + G D G++ + ++ + + ++
Sbjct: 7 LVSHSKMITDGIKEMIEQMNASEEITIHSLGGTSDGSLGSDPMKIIDTINEADSDREFLI 66
Query: 230 IGEIGGG-PNAKPVVSFIAGI 249
++G +++ +
Sbjct: 67 FADLGSAVLSSELAFDMLEED 87
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate
dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId:
9606]}
Length = 192
Score = 25.4 bits (55), Expect = 6.6
Identities = 7/31 (22%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 101 AKAIHEALDAEM---PLIVCITEGIPQLDMV 128
AI++ +D E+ + + E + Q D
Sbjct: 7 RDAINQGMDEELERDEKVFLLGEEVAQYDGA 37
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate
dehydrogenase, Pyr module {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 191
Score = 25.4 bits (55), Expect = 6.8
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 101 AKAIHEALDAEM---PLIVCITEGI 122
AKAI+ AL EM +V + E +
Sbjct: 11 AKAINMALHEEMERDERVVVLGEDV 35
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 128
Score = 24.9 bits (54), Expect = 8.6
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 16/88 (18%)
Query: 32 KVICQGFTGKQGTFHSKQAIEYGTKVVGGVSPGKGGKTHLDLPVFNTVKEARDATGAEAT 91
K G++G+ G K E G ++V V V + +
Sbjct: 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD----------------VNGVEELDSPDVV 45
Query: 92 VIYVPPPGAAKAIHEALDAEMPLIVCIT 119
+ + P K + L++ T
Sbjct: 46 IDFSSPEALPKTVDLCKKYRAGLVLGTT 73
>d1kjqa1 b.84.2.1 (A:319-392) Glycinamide ribonucleotide
transformylase PurT, C-domain {Escherichia coli [TaxId:
562]}
Length = 74
Score = 23.9 bits (52), Expect = 9.5
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 7/32 (21%)
Query: 250 TAPPGRRMGHAGAIISGGKGGAQDKIDALEKA 281
RR+G A A A+ +DA+E+A
Sbjct: 39 EIDGSRRLGVALAT-------AESVVDAIERA 63
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.138 0.410
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,153,345
Number of extensions: 56137
Number of successful extensions: 176
Number of sequences better than 10.0: 1
Number of HSP's gapped: 169
Number of HSP's successfully gapped: 29
Length of query: 306
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 221
Effective length of database: 1,240,546
Effective search space: 274160666
Effective search space used: 274160666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.6 bits)