Your job contains 1 sequence.
>psy8895
VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW
DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL
LDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLV
PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSAD
KIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPG
SMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLA
AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSIC
VNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFFFFLAFSYLNRVGVF
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8895
(479 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 940 8.2e-106 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 904 3.6e-101 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 902 5.9e-101 2
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 901 7.5e-101 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 891 8.6e-100 2
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 887 2.3e-99 2
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 864 2.3e-97 2
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 892 2.2e-89 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 843 3.9e-87 2
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 791 1.1e-78 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 776 4.3e-77 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 771 1.5e-76 1
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 737 5.9e-73 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 697 5.3e-71 2
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 695 8.6e-71 2
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 605 5.7e-59 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 538 7.2e-52 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 538 7.2e-52 1
CGD|CAL0005182 - symbol:orf19.5413 species:5476 "Candida ... 275 1.4e-38 2
UNIPROTKB|Q5A7Q3 - symbol:PRP46 "Pre-mRNA-splicing factor... 275 1.4e-38 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 270 2.0e-29 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 291 1.9e-26 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 221 1.6e-22 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 220 3.2e-22 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 211 3.4e-22 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 234 5.1e-22 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 212 1.1e-21 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 211 1.5e-21 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 211 1.5e-21 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 211 1.5e-21 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 211 1.5e-21 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 211 1.5e-21 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 211 1.5e-21 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 211 1.5e-21 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 211 1.5e-21 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 211 1.5e-21 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 212 1.9e-21 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 208 3.5e-21 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 228 4.0e-21 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 230 4.3e-21 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 228 1.2e-20 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 265 1.6e-20 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 228 3.1e-20 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 156 9.9e-20 3
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 210 1.5e-19 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 190 1.7e-19 3
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 190 2.1e-19 3
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 189 3.2e-19 3
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 180 3.4e-19 3
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 230 5.6e-19 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 181 6.5e-19 3
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 233 2.8e-18 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 202 9.9e-18 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 230 1.5e-17 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 230 2.0e-17 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 150 2.3e-17 3
FB|FBgn0028496 - symbol:CG30116 species:7227 "Drosophila ... 224 3.1e-17 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 230 3.1e-17 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 230 3.2e-17 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 190 3.2e-17 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 239 4.1e-17 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 225 4.6e-17 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 189 5.5e-17 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 228 6.6e-17 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 205 7.0e-17 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 225 7.5e-17 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 181 1.4e-16 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 205 2.4e-16 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 205 2.4e-16 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 205 2.4e-16 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 205 2.4e-16 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 205 2.4e-16 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 184 3.1e-16 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 184 3.4e-16 2
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 158 3.9e-16 3
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 206 4.8e-16 2
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 202 6.5e-16 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 227 6.6e-16 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 183 6.7e-16 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 204 7.7e-16 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 183 9.1e-16 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 181 9.7e-16 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 180 1.0e-15 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 186 1.0e-15 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 186 1.0e-15 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 139 1.4e-15 3
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 178 2.0e-15 2
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 169 2.1e-15 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 198 2.2e-15 2
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 194 2.3e-15 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 196 2.6e-15 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 149 3.5e-15 2
UNIPROTKB|O42249 - symbol:gnb2l1 "Guanine nucleotide-bind... 152 3.7e-15 3
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 160 5.5e-15 2
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 224 6.5e-15 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 177 7.2e-15 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 220 8.9e-15 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 184 9.9e-15 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 211 1.2e-14 2
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 198 1.3e-14 2
WARNING: Descriptions of 1171 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 940 (336.0 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 178/302 (58%), Positives = 225/302 (74%)
Query: 184 ASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKII 243
AS+ Q+I + KA +PKP+WHAPWKL RVISGHLGWVRC+AVEPGNEWFATG+ D++I
Sbjct: 140 ASHLQLIPK---KAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVI 196
Query: 244 KVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK--------- 294
K+WDLA+GKLKLSLTGHV +VRG+ VS +HPYLFSCG+DR VKCWDLEYNK
Sbjct: 197 KIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHL 256
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRL--ITTEAD-KTVKLYKEDDSAT--EESHP-VITG 348
+ V ++ + + + +S +R+ + T+A+ T+ + ++ + ++P +ITG
Sbjct: 257 SAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITG 316
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQN 408
SHD T+RLWDLAAGKS+CTLTNHKKSVRS+ LHP+LYMFASASPDNIKQW+CPEGKF+QN
Sbjct: 317 SHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQN 376
Query: 409 LPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFFFFL 468
+ GH +I+N + N+EGVLVSG DNGTM FWDWRTGYNFQR Q G F +
Sbjct: 377 ISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAM 436
Query: 469 AF 470
F
Sbjct: 437 CF 438
Score = 303 (111.7 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 75/173 (43%), Positives = 98/173 (56%)
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGS 238
V A+N QII + + + W A K ++ H VR + + P FA+ S
Sbjct: 304 VVAQATNPQIITGSHDSTVRL----WDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASAS 359
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE--YN--- 293
D I K W GK +++GH V + + L S GD+ T+ WD YN
Sbjct: 360 PDNI-KQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDWRTGYNFQR 417
Query: 294 -KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
+APVQPGSMDSE+GIF+M FD SGSRLIT EADKT+K+YKEDD A+EESHP+
Sbjct: 418 FQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESHPI 470
Score = 288 (106.4 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 52/68 (76%), Positives = 63/68 (92%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V +++LHPTIDVL T+GRDSTAR+WD+RTKANV+TLTGHTNT+ASVV Q
Sbjct: 248 VIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQ 307
Query: 85 ASEPQVGT 92
A+ PQ+ T
Sbjct: 308 ATNPQIIT 315
Score = 127 (49.8 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 22/38 (57%), Positives = 32/38 (84%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQL 179
+++VQ+HSVHTL+FRSLKRTHD+F+S Q +P + +L
Sbjct: 3 MEDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERL 40
Score = 115 (45.5 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGHV +VRG+ +V+T HP L + G D + W
Sbjct: 198 IWDLASGKLKLSLTGHVSTVRGV-----------AVST--KHP---YLFSCGEDRQVKCW 241
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ + GH + + S+
Sbjct: 242 DLEYNKVIRHYHGHLSAVYSL 262
Score = 88 (36.0 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P + T D ++WD+ + +LTGH +T+ V P
Sbjct: 170 GHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHP 227
Score = 68 (29.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/123 (25%), Positives = 50/123 (40%)
Query: 325 ADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
A VK Y E++ P++TG+H +R SL + ++A H L
Sbjct: 94 AGSLVK-YNAGARPAEKTAPLVTGTHTSLVRA-------SLANSNADMSANGAIASH--L 143
Query: 385 YMFASASPDNIK-QWKCPEGKFIQNLPGHNAIINSICVN--NEGVLVSGADNGTMCFWDW 441
+ +P K +W P K + + GH + I V NE +GA + + WD
Sbjct: 144 QLIPKKAPSIPKPKWHAP-WKLSRVISGHLGWVRCIAVEPGNEW-FATGAGDRVIKIWDL 201
Query: 442 RTG 444
+G
Sbjct: 202 ASG 204
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 904 (323.3 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 179/316 (56%), Positives = 213/316 (67%)
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNE 232
P+ N +V T + AK KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+
Sbjct: 159 PTAMNSIVMETGNTKNSALMAK-KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQ 217
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
WF TGSAD+ IK+WDLA+GKLKLSLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEY
Sbjct: 218 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY 277
Query: 293 NKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------------ 339
NK G + S ++ + + L+T D T +++ A+
Sbjct: 278 NKVIRHYHGHL---SAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334
Query: 340 ----EESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN 394
+ + P +ITGSHD TIRLWDL AGK+ TLTNHKKSVR+V LHP Y FAS SPDN
Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN 394
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
IKQWK P+G FIQNL GHNAIIN++ VN++GVLVSGADNGTM WDWRTGYNFQR+
Sbjct: 395 IKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 454
Query: 455 VSGFPKPSVFFFFLAF 470
G F AF
Sbjct: 455 QPGSLDSESGIFACAF 470
Score = 283 (104.7 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 65/137 (47%), Positives = 84/137 (61%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR V + P + FA+GS D I K W G +L+GH + LTV+
Sbjct: 368 LTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNS-DG 425
Query: 275 YLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D+ T+ WD YN A VQPGS+DSESGIF+ FD S SRL+T EADKT
Sbjct: 426 VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKT 485
Query: 329 VKLYKEDDSATEESHPV 345
+K+Y+EDD+ATEE+HPV
Sbjct: 486 IKVYREDDTATEETHPV 502
Score = 264 (98.0 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 339
Query: 85 ASEPQVGT 92
A+EPQ+ T
Sbjct: 340 AAEPQIIT 347
Score = 119 (46.9 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFIS 167
++EVQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVA 27
Score = 106 (42.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGH+ +VRG VI V+T S + L + G D + W
Sbjct: 230 IWDLASGKLKLSLTGHISTVRG--VI---------VSTRSPY-----LFSCGEDKQVKCW 273
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 274 DLEYNKVIRHYHGHLSAV 291
Score = 97 (39.2 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ P
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Score = 94 (38.1 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD-VRTKANVYTLT 72
T + VR + GH ++V T+ +IT D+T R+WD V K V TLT
Sbjct: 311 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV-TLT 369
Query: 73 GHTNTIASVV 82
H ++ +VV
Sbjct: 370 NHKKSVRAVV 379
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 902 (322.6 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 178/316 (56%), Positives = 213/316 (67%)
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNE 232
P+ N ++ T++ AK KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+
Sbjct: 159 PTAMNSMIMETSNTKNSALMAK-KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQ 217
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
WF TGSAD+ IK+WDLA+GKLKLSLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEY
Sbjct: 218 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY 277
Query: 293 NKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------------ 339
NK G + S ++ + + L+T D T +++ A+
Sbjct: 278 NKVIRHYHGHL---SAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334
Query: 340 ----EESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN 394
+ + P +ITGSHD TIRLWDL AGK+ TLTNHKKSVR+V LHP Y FAS SPDN
Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN 394
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
IKQWK P+G FIQNL GHNAIIN++ VN +GVLVSGADNGTM WDWRTGYNFQR+
Sbjct: 395 IKQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 454
Query: 455 VSGFPKPSVFFFFLAF 470
G F AF
Sbjct: 455 QPGSLDSESGIFACAF 470
Score = 270 (100.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 63/137 (45%), Positives = 83/137 (60%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR V + P + FA+GS D I K W G +L+GH + L V+
Sbjct: 368 LTNHKKSVRAVVLHPLHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNT-DG 425
Query: 275 YLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D+ T+ WD YN A VQPGS+DSESGIF+ FD S SRL+T EADKT
Sbjct: 426 VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKT 485
Query: 329 VKLYKEDDSATEESHPV 345
+K+Y+ED++ATEE+HPV
Sbjct: 486 IKVYREDETATEETHPV 502
Score = 264 (98.0 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 339
Query: 85 ASEPQVGT 92
A+EPQ+ T
Sbjct: 340 AAEPQIIT 347
Score = 119 (46.9 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFIS 167
++EVQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVA 27
Score = 106 (42.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGH+ +VRG VI V+T S + L + G D + W
Sbjct: 230 IWDLASGKLKLSLTGHISTVRG--VI---------VSTRSPY-----LFSCGEDKQVKCW 273
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 274 DLEYNKVIRHYHGHLSAV 291
Score = 97 (39.2 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ P
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Score = 94 (38.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD-VRTKANVYTLT 72
T + VR + GH ++V T+ +IT D+T R+WD V K V TLT
Sbjct: 311 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV-TLT 369
Query: 73 GHTNTIASVV 82
H ++ +VV
Sbjct: 370 NHKKSVRAVV 379
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 901 (322.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 179/316 (56%), Positives = 213/316 (67%)
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNE 232
P+ N ++ T NT+ KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+
Sbjct: 159 PTAMNSIMET--GNTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQ 216
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
WF TGSAD+ IK+WDLA+GKLKLSLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEY
Sbjct: 217 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY 276
Query: 293 NKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------------ 339
NK G + S ++ + + L+T D T +++ A+
Sbjct: 277 NKVIRHYHGHL---SAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 333
Query: 340 ----EESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN 394
+ + P +ITGSHD TIRLWDL AGK+ TLTNHKKSVR+V LHP LY FAS SPDN
Sbjct: 334 TVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDN 393
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
IKQWK P+G FIQNL GHNAIIN++ VN +GVLVSGADNGTM WDWRTGYNFQR+
Sbjct: 394 IKQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHAAV 453
Query: 455 VSGFPKPSVFFFFLAF 470
G F AF
Sbjct: 454 QPGSLDSESGIFACAF 469
Score = 266 (98.7 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 63/137 (45%), Positives = 82/137 (59%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR V + P FA+GS D I K W G +L+GH + L V+
Sbjct: 367 LTNHKKSVRAVVLHPLLYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNA-DG 424
Query: 275 YLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D+ T+ WD YN A VQPGS+DSESGIF+ FD S SRL+T EADKT
Sbjct: 425 VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKT 484
Query: 329 VKLYKEDDSATEESHPV 345
+K+Y+ED++ATEE+HPV
Sbjct: 485 IKVYREDETATEETHPV 501
Score = 262 (97.3 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 47/68 (69%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPT+DVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 338
Query: 85 ASEPQVGT 92
A+EPQ+ T
Sbjct: 339 AAEPQIIT 346
Score = 119 (46.9 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFIS 167
++EVQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVA 27
Score = 106 (42.4 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGH+ +VRG VI V+T S + L + G D + W
Sbjct: 229 IWDLASGKLKLSLTGHISTVRG--VI---------VSTRSPY-----LFSCGEDKQVKCW 272
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 273 DLEYNKVIRHYHGHLSAV 290
Score = 97 (39.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ P
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Score = 94 (38.1 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD-VRTKANVYTLT 72
T + VR + GH ++V T+ +IT D+T R+WD V K V TLT
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV-TLT 368
Query: 73 GHTNTIASVV 82
H ++ +VV
Sbjct: 369 NHKKSVRAVV 378
Score = 64 (27.6 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDL GK +++LT H SVR + +
Sbjct: 355 LWDLVAGKTRVTLTNHKKSVRAVVL 379
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 891 (318.7 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 177/305 (58%), Positives = 211/305 (69%)
Query: 184 ASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKII 243
A N+ ++ AK KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+WF TGSAD+ I
Sbjct: 173 AKNSALM--AK-KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTI 229
Query: 244 KVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSM 302
K+WDLA+GKLKLSLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEYNK G +
Sbjct: 230 KIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHL 289
Query: 303 DSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT----------------EESHP-V 345
S ++ + + L+T D T +++ A+ + + P +
Sbjct: 290 ---SAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 346
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKF 405
ITGSHD TIRLWDL AGK+ TLTNHKKSVR+V LHP Y FAS SPDNIKQWK P+G F
Sbjct: 347 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSF 406
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFF 465
IQNL GHNAIIN++ VN++GVLVSGADNGTM WDWRTGYNFQR+ G
Sbjct: 407 IQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGI 466
Query: 466 FFLAF 470
F AF
Sbjct: 467 FACAF 471
Score = 286 (105.7 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 66/137 (48%), Positives = 84/137 (61%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR V + P + FA+GS D I K W G +L+GH + LTV+
Sbjct: 369 LTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNS-DG 426
Query: 275 YLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D+ T+ WD YN A VQPGS+DSESGIF+ FD S SRL+T EADKT
Sbjct: 427 VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKT 486
Query: 329 VKLYKEDDSATEESHPV 345
+K+YKEDD+ATEE+HPV
Sbjct: 487 IKVYKEDDTATEETHPV 503
Score = 264 (98.0 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 281 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 340
Query: 85 ASEPQVGT 92
A+EPQ+ T
Sbjct: 341 AAEPQIIT 348
Score = 119 (46.9 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFIS 167
++EVQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVA 27
Score = 106 (42.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGH+ +VRG VI V+T S + L + G D + W
Sbjct: 231 IWDLASGKLKLSLTGHISTVRG--VI---------VSTRSPY-----LFSCGEDKQVKCW 274
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 275 DLEYNKVIRHYHGHLSAV 292
Score = 97 (39.2 bits), Expect = 9.5e-29, Sum P(2) = 9.5e-29
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ P
Sbjct: 203 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Score = 94 (38.1 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD-VRTKANVYTLT 72
T + VR + GH ++V T+ +IT D+T R+WD V K V TLT
Sbjct: 312 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV-TLT 370
Query: 73 GHTNTIASVV 82
H ++ +VV
Sbjct: 371 NHKKSVRAVV 380
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 887 (317.3 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 170/280 (60%), Positives = 201/280 (71%)
Query: 196 KALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+WF TGSAD+ IK+WDLA+GKLKL
Sbjct: 183 KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKL 242
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFD 314
SLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEYNK G + S ++ +
Sbjct: 243 SLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHL---SAVYGLDLH 299
Query: 315 NSGSRLITTEADKTVKLYKEDDSAT----------------EESHP-VITGSHDCTIRLW 357
+ L+T D T +++ A+ + + P V+TGSHD TIRLW
Sbjct: 300 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLW 359
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIIN 417
DL AGK+ TLTNHKKSVR+V LHP Y FAS SPDNIKQWK P+G FIQNL GHNAIIN
Sbjct: 360 DLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIIN 419
Query: 418 SICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
++ VN++GVLVSGADNGTM WDWRTGYNFQR+ G
Sbjct: 420 TLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 459
Score = 315 (115.9 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 105/333 (31%), Positives = 150/333 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ A P
Sbjct: 204 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP-- 261
Query: 91 GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQI--IQEQCFLNLQEVQRH 148
+L SC ++ W L+ + +L V
Sbjct: 262 ---------------------YLFSCGEDK----QVKCWDLEYNKVIRHYHGHLSAVYGL 296
Query: 149 SVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKAL-PMPKPQWHA 207
+H + + + D S + V T + +T + K +A P H
Sbjct: 297 DLHPTIDVLVTCSRD---STARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHD 353
Query: 208 P----WKLY----RV-ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
W L RV ++ H VR V + P + FA+GS D I K W G +L+
Sbjct: 354 TTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLS 412
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMT 312
GH + LTV+ L S D+ T+ WD YN A VQPGS+DSESGIF+
Sbjct: 413 GHNAIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACV 471
Query: 313 FDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
FD S SRL+T EADKT+K+YKEDD+ATEE+HP+
Sbjct: 472 FDQSESRLLTAEADKTIKVYKEDDTATEETHPI 504
Score = 267 (99.0 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 49/68 (72%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 282 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQ 341
Query: 85 ASEPQVGT 92
A+EPQV T
Sbjct: 342 AAEPQVVT 349
Score = 119 (46.9 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 21/26 (80%), Positives = 26/26 (100%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFIS 167
++EVQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVA 27
Score = 103 (41.3 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDLA+GKLKLSLTGH+ +VRG+ V
Sbjct: 232 IWDLASGKLKLSLTGHISTVRGVIV 256
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 864 (309.2 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 168/281 (59%), Positives = 201/281 (71%)
Query: 196 KALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
KA MPKPQWH PWKLYRVISGHLGWVR +AVEPGN+WF TGSAD+ IK+WDLA+GKLKL
Sbjct: 185 KAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKL 244
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFD 314
SLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEYNK G + S ++ +
Sbjct: 245 SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHL---SAVYDLDLH 301
Query: 315 NSGSRLITTEADKTVKLYK-------------EDDSAT---EESHP-VIT-GSHDCTIRL 356
+ L+T D T +++ + AT + + P V+T GSHD TIRL
Sbjct: 302 PTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRL 361
Query: 357 WDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAII 416
WDL AGK+ TLTNHKKSVR++ LHP Y FAS SPDNIKQWK P+G FIQNL GHNAII
Sbjct: 362 WDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAII 421
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
N++ VN++GVLVSGADNGT+ WDWRTGYNFQR+ G
Sbjct: 422 NTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPG 462
Score = 288 (106.4 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 68/142 (47%), Positives = 83/142 (58%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K ++ H VR + + P FA+GS D I K W G +L+GH + L V
Sbjct: 368 KTRATLTNHKKSVRALVLHPRQYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLAV 426
Query: 270 SPRHPYLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ L S D+ T+ WD YN A VQPGS+DSESGIFS FD S SRLIT
Sbjct: 427 NS-DGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITA 485
Query: 324 EADKTVKLYKEDDSATEESHPV 345
EADKT+K+YKEDD+ATEESHPV
Sbjct: 486 EADKTIKVYKEDDTATEESHPV 507
Score = 272 (100.8 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 49/68 (72%), Positives = 60/68 (88%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RD+TARVWD+RTKANV+TL+GHTNT+A+V Q
Sbjct: 284 VIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQ 343
Query: 85 ASEPQVGT 92
++EPQV T
Sbjct: 344 SAEPQVVT 351
Score = 123 (48.4 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 22/27 (81%), Positives = 26/27 (96%)
Query: 141 NLQEVQRHSVHTLVFRSLKRTHDMFIS 167
N Q+VQ+HSVHTLVFRSLKRTHDMF++
Sbjct: 8 NTQDVQKHSVHTLVFRSLKRTHDMFVA 34
Score = 104 (41.7 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDLA+GKLKLSLTGH+ +VRG+ V
Sbjct: 234 IWDLASGKLKLSLTGHISTVRGVAV 258
Score = 94 (38.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V +I++ P +T D T ++WD+ + +LTGH +T+ V P
Sbjct: 206 GHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Score = 84 (34.6 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAG-RDSTARVWDVRTKANVYTLT 72
T V +R + GH ++V T+ ++T G D+T R+WD+ TLT
Sbjct: 315 TARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLT 374
Query: 73 GHTNTIASVV 82
H ++ ++V
Sbjct: 375 NHKKSVRALV 384
Score = 63 (27.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
I++ GH + +NT++++ VL++ + T +WD RT N
Sbjct: 411 IQNLSGHNAIINTLAVNSD-GVLVSGADNGTIHMWDWRTGYN 451
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 177/307 (57%), Positives = 212/307 (69%)
Query: 182 TTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADK 241
+ A N+ ++ AK KA MPKPQWH PWKLYRVISGHLGWVRC+AVEPGN+WF TGSAD+
Sbjct: 169 SNAKNSALM--AK-KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADR 225
Query: 242 IIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PG 300
IK+WDLA+GKLKLSLTGH+ +VRG+ VS R PYLFSCG+D+ VKCWDLEYNK G
Sbjct: 226 TIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHG 285
Query: 301 SMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT----------------EESHP 344
+ S ++ + + L+T D T +++ A+ + + P
Sbjct: 286 HL---SAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEP 342
Query: 345 -VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEG 403
+ITGSHD TIRLWDL AGK+ TLTNHKKSVR+V LHP Y FAS SPDNIKQWK P+G
Sbjct: 343 QIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDG 402
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSV 463
FIQNL GHNAIIN++ VN++GVLVSGADNGTM WDWRTGYNFQR+ G
Sbjct: 403 SFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSES 462
Query: 464 FFFFLAF 470
F AF
Sbjct: 463 GIFACAF 469
Score = 286 (105.7 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 66/137 (48%), Positives = 84/137 (61%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR V + P + FA+GS D I K W G +L+GH + LTV+
Sbjct: 367 LTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNS-DG 424
Query: 275 YLFSCGDDRTVKCWDLE--YN----KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D+ T+ WD YN A VQPGS+DSESGIF+ FD S SRL+T EADKT
Sbjct: 425 VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKT 484
Query: 329 VKLYKEDDSATEESHPV 345
+K+YKEDD+ATEE+HPV
Sbjct: 485 IKVYKEDDTATEETHPV 501
Score = 264 (98.0 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V + LHPTIDVL+T RDSTAR+WDVRTKA+V+TL+GHTN +A+V Q
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 338
Query: 85 ASEPQVGT 92
A+EPQ+ T
Sbjct: 339 AAEPQIIT 346
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 91/327 (27%), Positives = 143/327 (43%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMFISCQ-ELVPSTENQLVPTTASNTQIIQQAKAKALPM 200
++EVQ+HSVHTLVFRSLKRTHDMF++ + VP E A ++ L M
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK---LRNEYGPVLHM 58
Query: 201 PKPQWHAPWKLYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLATGKLKLSLTG 259
P + + K+ + S G + A + E+ TG+ T K+
Sbjct: 59 PTSKENLKEKVPQNASDSYGHKQYPANQGQEVEYLVTGTHPYPPGPGVALTADTKIQRMP 118
Query: 260 HVGSVRGLTVSPRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMD--SESGIFSMTFDNS 316
+ + L V+ P + D +R V EY PG+ D +G M N+
Sbjct: 119 SESAAQSLAVAL--PASQARADANRPVPAGG-EYR----HPGAPDRAQPAGAVVMEGSNA 171
Query: 317 GSRLITTEADKTV---------KLYKEDDS--------ATEESHP-VITGSHDCTIRLWD 358
+ + + T+ KLY+ A E + +TGS D TI++WD
Sbjct: 172 KNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWD 231
Query: 359 LAAGKSLCTLTNHKKSVRSVALHP-TLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIIN 417
LA+GK +LT H +VR V + + Y+F+ +K W K I++ GH + +
Sbjct: 232 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 291
Query: 418 SICVNNE-GVLVSGADNGTMCFWDWRT 443
+ ++ VLV+ + + T WD RT
Sbjct: 292 GLDLHPTIDVLVTCSRDSTARIWDVRT 318
Score = 106 (42.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+GKLKLSLTGH+ +VRG VI V+T S + L + G D + W
Sbjct: 229 IWDLASGKLKLSLTGHISTVRG--VI---------VSTRSPY-----LFSCGEDKQVKCW 272
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 273 DLEYNKVIRHYHGHLSAV 290
Score = 97 (39.2 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GHL V I++ P +T D T ++WD+ + +LTGH +T+ V+ P
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Score = 94 (38.1 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD-VRTKANVYTLT 72
T + VR + GH ++V T+ +IT D+T R+WD V K V TLT
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRV-TLT 368
Query: 73 GHTNTIASVV 82
H ++ +VV
Sbjct: 369 NHKKSVRAVV 378
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 843 (301.8 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 158/274 (57%), Positives = 201/274 (73%)
Query: 195 AKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
+KA M KP+WHAPWKLYRV SGH GWVR V VEPGN+WFA+G AD+IIK+WDLA+G+LK
Sbjct: 160 SKAPMMMKPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLK 219
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK---------APVQPGSMDSE 305
LSLTGH+ SVR + VSPRHP+LFS G+D+ VKCWDLEYNK + VQ S+
Sbjct: 220 LSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPS 279
Query: 306 SGIFSMTFDNSGSRLITTEADKTVKLYKED-----DSATEESHP-VITGSHDCTIRLWDL 359
+ +S +R+ V + D + P VIT SHD T+RLWDL
Sbjct: 280 LDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDL 339
Query: 360 AAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI 419
AAG+S+CTLT+HKKSVR++ +HP L MFASASPDNIKQWK P+G+F+QNL GHNAIIN++
Sbjct: 340 AAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNAIINTL 399
Query: 420 CVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVR 453
N++GV+VSGADNG++CFWDWR+G+ FQ++Q +
Sbjct: 400 SSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTK 433
Score = 252 (93.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 45/68 (66%), Positives = 56/68 (82%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS+V +S+HP++DVL+T RDSTARVWD+RTKA V+ GHTNT+A VV Q
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQ 319
Query: 85 ASEPQVGT 92
+ +PQV T
Sbjct: 320 SVDPQVIT 327
Score = 247 (92.0 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 57/139 (41%), Positives = 79/139 (56%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR + + P FA+ S D I K W L G+ +L+GH + T+S
Sbjct: 348 LTHHKKSVRALTIHPRLNMFASASPDNI-KQWKLPKGEFMQNLSGHNAIIN--TLSSNDD 404
Query: 275 YLFSCGDDRTVKC-WDLE----YNKAPV--QPGSMDSESGIFSMTFDNSGSRLITTEADK 327
+ G D C WD + K QPGS++SE+GI++ FD +G RLIT EADK
Sbjct: 405 GVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADK 464
Query: 328 TVKLYKEDDSATEESHPVI 346
T+K+YKEDD ATEESHP++
Sbjct: 465 TIKMYKEDDEATEESHPIV 483
Score = 104 (41.7 bits), Expect = 8.1e-25, Sum P(2) = 8.1e-25
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+G+LKLSLTGH+ SVR + V HP L + G D + W
Sbjct: 210 IWDLASGQLKLSLTGHISSVRAVKVSPR-------------HP---FLFSGGEDKQVKCW 253
Query: 61 DVRTKANVYTLTGHTNTIASVVTQAS 86
D+ + GH + + ++ S
Sbjct: 254 DLEYNKVIRHYHGHLSAVQALSVHPS 279
Score = 87 (35.7 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V +R + + GH ++V + +ITA D+T R+WD+ ++ TLT
Sbjct: 291 TARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTH 350
Query: 74 HTNTIASV 81
H ++ ++
Sbjct: 351 HKKSVRAL 358
Score = 74 (31.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GH V + + P + G D ++WD+ + +LTGH +++ +V P
Sbjct: 182 GHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHP 239
Score = 47 (21.6 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 144 EVQRHSVHTLVFRSLKRTHDMF 165
E + ++ VF+SLKR D+F
Sbjct: 26 EADKKALLNQVFKSLKRAQDLF 47
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 148/285 (51%), Positives = 201/285 (70%)
Query: 185 SNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIK 244
S ++++ A+ + +P+WHAPW L RVISGHLGWVRCV VEPGN+WF TG+ D+ IK
Sbjct: 132 SQASLVKRTLAEQI---RPEWHAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIK 188
Query: 245 VWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMD 303
+WDLA+G LKL+LTGH+ +VRGL VSPRHPYLFSCG+D+ VKCWDLE NK G +
Sbjct: 189 IWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHL- 247
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLY----KED------------DSATEESHP-VI 346
SG++++ + L+T D +++ +++ A +E P V+
Sbjct: 248 --SGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVV 305
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFI 406
TGS D TIRLWDLAAGK+L TLT+HKK+VR+++LHP + FAS S DNIK WK PEG F+
Sbjct: 306 TGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKHWKFPEGAFM 365
Query: 407 QNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
N GHNAI+N++ +N++ V+ SGADNG+MCFWDW++G+ +Q LQ
Sbjct: 366 GNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKYQELQ 410
Score = 244 (91.0 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS V + LHPT+DVL+TAGRD+ ARVWD+RT+ NV+ L+GH +T+AS+ Q
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ 298
Query: 85 ASEPQVGT 92
+PQV T
Sbjct: 299 EFDPQVVT 306
Score = 243 (90.6 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 58/147 (39%), Positives = 87/147 (59%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K ++ H VR +++ P FA+GS+D I K W G + GH
Sbjct: 316 WDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNI-KHWKFPEGAFMGNFEGHNAI 374
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLE----YNK--APVQPGSMDSESGIFSMTFDNSG 317
V L+++ + +FS D+ ++ WD + Y + + VQPGS+DSE+GIF+ +FD +G
Sbjct: 375 VNTLSINSDN-VMFSGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTG 433
Query: 318 SRLITTEADKTVKLYKEDDSATEESHP 344
RLIT EADK+VK+YK+ D+AT E+HP
Sbjct: 434 LRLITCEADKSVKIYKQVDNATPETHP 460
Score = 108 (43.1 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+G LKL+LTGH+ +VRGL V HP L + G D + W
Sbjct: 189 IWDLASGVLKLTLTGHIATVRGLAVSPR-------------HP---YLFSCGEDKMVKCW 232
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ T + GH + +
Sbjct: 233 DLETNKVIRHYHGHLSGV 250
Score = 92 (37.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
T++R GHL V + + P T D T ++WD+ + TLTGH T+ +
Sbjct: 154 TLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 84 QASEP 88
P
Sbjct: 214 SPRHP 218
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 151/289 (52%), Positives = 196/289 (67%)
Query: 187 TQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVW 246
T +IQ+ A P P+WHAPWKL RVISGHLGWVR +AVEP NEWFA+G+ D+ IK+W
Sbjct: 113 TSLIQRPSATR-QQP-PEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIW 170
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSE 305
+LATG L+L+LTGH+ +VRGL VSPRHPYLFSCG+D+ VKCWDLE NK G +
Sbjct: 171 NLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHL--- 227
Query: 306 SGIFSMTFDNSGSRLITTEADKTVKLY----KED------------DSATEESHP-VITG 348
SG++++ L+T D +++ + + D +E+ P VITG
Sbjct: 228 SGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITG 287
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQN 408
S D T+RLWDLAAGK++ LT+HKK +RS+A HP + FASAS +IKQWKCP G+F+QN
Sbjct: 288 SLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQN 347
Query: 409 LPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
GHNAIIN++ VN + VL SG DNG+M FWDW+TGY +Q + G
Sbjct: 348 FEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPG 396
Score = 240 (89.5 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 41/68 (60%), Positives = 55/68 (80%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIRHYHGHLS V T++LHP +D+L+T GRD ARVWD+RT++N++ L+GHT T+A V Q
Sbjct: 219 VIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQ 278
Query: 85 ASEPQVGT 92
++PQV T
Sbjct: 279 EADPQVIT 286
Score = 239 (89.2 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 57/148 (38%), Positives = 84/148 (56%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K V++ H +R +A P FA+ S I K W G+ + GH
Sbjct: 296 WDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSI-KQWKCPGGEFMQNFEGHNAI 354
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLE--YNKAPV----QPGSMDSESGIFSMTFDNSG 317
+ L+V+ + LFS GD+ ++ WD + Y + QPGS+++E+GI + TFD +G
Sbjct: 355 INTLSVNEDN-VLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTG 413
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPV 345
RLIT EADKT+K++K+DD AT E+HPV
Sbjct: 414 LRLITGEADKTIKVWKQDDQATPETHPV 441
Score = 105 (42.0 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+W+LATG L+L+LTGH+ +VRGL V HP L + G D + W
Sbjct: 169 IWNLATGALRLTLTGHISTVRGLAVSPR-------------HP---YLFSCGEDKMVKCW 212
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ T + GH + +
Sbjct: 213 DLETNKVIRHYHGHLSGV 230
Score = 94 (38.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++R GHL V ++++ P + + D T ++W++ T A TLTGH +T+ +
Sbjct: 135 LMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVS 194
Query: 85 ASEP 88
P
Sbjct: 195 PRHP 198
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 345 VITGSHDCTIRLW 357
+ITG D TI++W
Sbjct: 416 LITGEADKTIKVW 428
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 148/289 (51%), Positives = 197/289 (68%)
Query: 188 QIIQQAKAKALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVW 246
Q + A+A+ L M KP+WH PWKL RVISGHLGWVR +AVEP N+WFA+G+ D+ IK+W
Sbjct: 169 QQLTLARAQELNMQLKPEWHRPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIW 228
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSE 305
DLA+G+L+L+LTGH+ +VRGL VSPRHPYLFSC +D+ VKCWDLE NK G +
Sbjct: 229 DLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHL--- 285
Query: 306 SGIFSMTFDNSGSRLITTEADKTVKLYKE----------------DDSATEESHP-VITG 348
SG++++ + L+T D +++ + +E+ P VITG
Sbjct: 286 SGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITG 345
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQN 408
S D T+R+WDLAAGK++ LT+HKK VR++A HPT + FAS S +IKQWKCPEG F+QN
Sbjct: 346 SLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQN 405
Query: 409 LPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
GHN+IIN++ VN++ V SGADNG+M FWDW+TG+ FQ L G
Sbjct: 406 FEGHNSIINTLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPG 454
Score = 261 (96.9 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 91/336 (27%), Positives = 149/336 (44%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++R GHL V +++ P + D T ++WD+ + TLTGH +T+ +
Sbjct: 193 LMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVS 252
Query: 85 ASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQI--IQEQCFLNL 142
P +L SC + ++ W L+ + +L
Sbjct: 253 PRHP-----------------------YLFSCAEDKM----VKCWDLETNKVIRHYHGHL 285
Query: 143 QEVQRHSVHTLVFRSLKRTHDMFISCQEL-VPSTENQLVPTTASNTQII-QQAKAK---- 196
V ++H + + D ++ S + L T + ++++ Q+A +
Sbjct: 286 SGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITG 345
Query: 197 ALPMPKPQWH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
+L W A K V++ H VR +A P FA+GSA I K W G
Sbjct: 346 SLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSI-KQWKCPEGAFMQ 404
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK------APVQPGSMDSESGIF 309
+ GH + L+V+ ++ + FS D+ ++ WD + QPGS+ +ESGIF
Sbjct: 405 NFEGHNSIINTLSVNDQNVF-FSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIF 463
Query: 310 SMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
+ TFD SGSRLI EADKT+K++KED AT E+HP+
Sbjct: 464 TSTFDQSGSRLICGEADKTIKIWKEDMEATPETHPL 499
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 148/303 (48%), Positives = 193/303 (63%)
Query: 185 SNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIK 244
+N +I Q + L KP+WH PWKL RVISGH GWVR +AV+ NEWFATGS D IK
Sbjct: 175 NNRTLINQYEP--LTYTKPEWHPPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIK 232
Query: 245 VWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS 304
VWDLA+G+LK++LTGHV ++RGL VS RHPYLFS G+D V CWDLE NK V+
Sbjct: 233 VWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQ-VR-NYYGH 290
Query: 305 ESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA----------------TEESHP-VIT 347
G++S+ + L + D V+++ A ++ + P VI+
Sbjct: 291 RQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVIS 350
Query: 348 GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQ 407
GS D T++LWDLA G S TLTNHKK VRS+ +H Y FA+ + DNIKQWKCP+G FI+
Sbjct: 351 GSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIKQWKCPDGSFIK 410
Query: 408 NLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFFFF 467
NL GHN+IIN++ +N + VLVSG DNG++ FWDW+TGY FQ+ Q G + F
Sbjct: 411 NLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFD 470
Query: 468 LAF 470
+AF
Sbjct: 471 MAF 473
Score = 255 (94.8 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 56/138 (40%), Positives = 81/138 (58%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H VR + + FATG+AD I K W G +L+GH + + ++ +
Sbjct: 371 LTNHKKGVRSMVIHEKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNADN- 428
Query: 275 YLFSCGDDRTVKCWDLE----YNKAP--VQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S GD+ ++ WD + + K VQPGS++ E+GIF M FD +GSRLIT EADKT
Sbjct: 429 VLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLITCEADKT 488
Query: 329 VKLYKEDDSATEESHPVI 346
+K YKED+ AT +HPV+
Sbjct: 489 IKFYKEDEDATPYTHPVV 506
Score = 197 (74.4 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
+R+Y+GH V +++LHPT+DVL + GRD+ RVWD+RT+AN++ + GH TI S+ +Q
Sbjct: 284 VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQN 343
Query: 86 SEPQV 90
++PQV
Sbjct: 344 ADPQV 348
Score = 116 (45.9 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWDLA+G+LK++LTGHV ++RGL V S HP L + G D+ W
Sbjct: 233 VWDLASGELKVTLTGHVSAIRGLEVS-------------SRHP---YLFSVGEDNKVLCW 276
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ + V GH + SV
Sbjct: 277 DLESNKQVRNYYGHRQGVYSV 297
Score = 84 (34.6 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++R GH V I++ + + T D+T +VWD+ + TLTGH + I +
Sbjct: 199 LMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVS 258
Query: 85 ASEP 88
+ P
Sbjct: 259 SRHP 262
Score = 60 (26.2 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDLATG +LT H VR + +
Sbjct: 359 LWDLATGTSAATLTNHKKGVRSMVI 383
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 697 (250.4 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 137/290 (47%), Positives = 185/290 (63%)
Query: 181 PTTASNTQIIQQAKAKALPM--PKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGS 238
P + S + A + +P P+P+WHAPWK YRV+ GHLGWVR VA +P NEWF TGS
Sbjct: 130 PGSFSERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGS 189
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ 298
AD+ IK+WD+ATG LKL+LTGH+G VRGL VS RH Y+FS GDD+ VKCWDLE NK V
Sbjct: 190 ADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK--VI 247
Query: 299 PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK------------EDDSATEESHP-- 344
G++ + + ++T D +++ + D + + P
Sbjct: 248 RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTD 307
Query: 345 --VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPE 402
VITGSHD TI+ WDL GKS+ T+TNHKK+VR++ALHP F SAS DNIK++ P+
Sbjct: 308 PQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPK 367
Query: 403 GKFIQNLPG-HNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
G+F N+ IIN++ VN +GV+V+G D G + FWDW++G+NFQR +
Sbjct: 368 GEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWDWKSGHNFQRAE 417
Score = 204 (76.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 52/145 (35%), Positives = 82/145 (56%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKL---KLSLTGHVGSVRG 266
K I+ H VR +A+ P F + SAD I K + L G+ LSL + +
Sbjct: 328 KSMATITNHKKTVRAMALHPKENDFVSASADNI-KKFSLPKGEFCHNMLSLQRDI--INA 384
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLE----YNKAP--VQPGSMDSESGIFSMTFDNSGSRL 320
+ V+ + + GD + WD + + +A VQPGS++SE+GI++ +D +GSRL
Sbjct: 385 VAVN-EDGVMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRL 443
Query: 321 ITTEADKTVKLYKEDDSATEESHPV 345
+T E DKT+K++KED+ AT E+HP+
Sbjct: 444 VTCEGDKTIKMWKEDEDATPETHPL 468
Score = 193 (73.0 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIR YHGHL V ++LHPT+DV++T GRDS RVWD+RTK ++ L H + + SV+ +
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLAR 304
Query: 85 ASEPQVGT 92
++PQV T
Sbjct: 305 PTDPQVIT 312
Score = 108 (43.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD+ATG LKL+LTGH+G VRGL V H ++ S AG D + W
Sbjct: 196 IWDVATGVLKLTLTGHIGQVRGLAVSNR-HTYMFS---------------AGDDKQVKCW 239
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + + GH + +
Sbjct: 240 DLEQNKVIRSYHGHLHGV 257
Score = 91 (37.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
R GHL V +++ P+ + T D T ++WDV T TLTGH +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQV 215
Score = 40 (19.1 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 140 LNLQEVQRHSVHTLVFRSLKRTHDMF 165
LN +EV+ S+ L +S++R ++F
Sbjct: 6 LN-REVETQSLKKLSLKSVRRAREIF 30
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 695 (249.7 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 139/293 (47%), Positives = 189/293 (64%)
Query: 179 LVPTTASNTQ--IIQQAKAKALPM--PKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWF 234
++P S+ Q + A + +P P+P+WHAPWK YRVI GHLGWVR VA +P NEWF
Sbjct: 132 IIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWF 191
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
TGSAD+ IK+WD+ATG LKL+LTGH+ VRGL VS RH Y+FS GDD+ VKCWDLE NK
Sbjct: 192 CTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK------------EDDSA---- 338
V SG++ + + L+T D +++ D++
Sbjct: 252 --VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVF 309
Query: 339 TEESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ 397
T + P V+TGSHD TI+ WDL GK++ TLT+HKKSVR++ LHP FASAS DN K+
Sbjct: 310 TRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Query: 398 WKCPEGKFIQN-LPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
+ P+G+F N L IIN++ VN +GV+V+G DNG++ FWDW++G++FQ+
Sbjct: 370 FSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQ 422
Score = 235 (87.8 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIR YHGHLS V ++LHPT+DVL+T GRDS RVWD+RTK ++ L+GH NT+ SV T+
Sbjct: 252 VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTR 311
Query: 85 ASEPQVGT 92
++PQV T
Sbjct: 312 PTDPQVVT 319
Score = 217 (81.4 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 47/142 (33%), Positives = 81/142 (57%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K ++ H VR + + P FA+ SAD K + L G+ ++ ++
Sbjct: 335 KTMSTLTHHKKSVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIINAMA 393
Query: 270 SPRHPYLFSCGDDRTVKCWD------LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ + GD+ ++ WD + ++ VQPGS++SE+GI++ +DN+GSRL+T
Sbjct: 394 VNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTC 453
Query: 324 EADKTVKLYKEDDSATEESHPV 345
EADKT+K++KED++AT E+HP+
Sbjct: 454 EADKTIKMWKEDENATPETHPI 475
Score = 124 (48.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 338 ATEESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI- 395
A H + + D ++ WDL K + + H V +ALHPTL + + D++
Sbjct: 225 AVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRL---- 450
+ W I L GH+ + S+ + +V+G+ + T+ FWD R G L
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHK 344
Query: 451 -QVRCVSGFPKPSVF 464
VR ++ PK + F
Sbjct: 345 KSVRAMTLHPKENAF 359
Score = 100 (40.3 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD+ATG LKL+LTGH+ VRGL V H ++ S AG D + W
Sbjct: 202 IWDVATGVLKLTLTGHIEQVRGLAVSNR-HTYMFS---------------AGDDKQVKCW 245
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + + GH + +
Sbjct: 246 DLEQNKVIRSYHGHLSGV 263
Score = 91 (37.1 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
R GHL V +++ P+ + T D T ++WDV T TLTGH +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQV 221
Score = 40 (19.1 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 142 LQEVQRHSVHTLVFRSLKRTHDMF 165
++ ++ S+ L +SLKR+ ++F
Sbjct: 8 IEPIEAQSLKKLSLKSLKRSLELF 31
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 121/275 (44%), Positives = 168/275 (61%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEP-GNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
+P+WHAPWKL RVI+GHLGWVRCVA++P NEWF TGS D +KVWDLATGKLK +L GH
Sbjct: 122 RPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGH 181
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
V +VR + VS RHPYLFS +D+TVKCWDLE N+ + SG+ +++ + +
Sbjct: 182 VMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQ--IIRDYYGHLSGVRTVSIHPTLDLI 239
Query: 321 ITTEADKTVKLYK-----------------EDDSATEESHPVITGSHDCTIRLWDLAAGK 363
T D +KL+ T V++ S D T+RLWD+ AGK
Sbjct: 240 ATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGK 299
Query: 364 SLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNA-IINSICVN 422
++ LT+HK+SVR+ ALHP + ASA D+I+ W EG + N IIN++ +N
Sbjct: 300 TMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSIN 359
Query: 423 NEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+ VL +G DNG + F+D+++G+ +Q L R + G
Sbjct: 360 QDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVG 394
Score = 212 (79.7 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 86/336 (25%), Positives = 144/336 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDV-LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
R +GHL V +++ P + IT D+T +VWD+ T TL GH T+ V
Sbjct: 133 RVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSD 192
Query: 86 SEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQL---QIIQEQCFLNL 142
P +F S+ + T++ W L QII++ + +L
Sbjct: 193 RHPY--------------LF-------------SVSEDKTVKCWDLEKNQIIRDY-YGHL 224
Query: 143 QEVQRHSVHTLVFRSLKRTHDMFISCQEL---VP--STENQLVPTTASN-TQIIQQAKAK 196
V+ S+H + D I ++ +P + P T + Q +
Sbjct: 225 SGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSS 284
Query: 197 ALPMPKPQWHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
+ W K +V++ H VR A+ P A+ D I + W LA G L
Sbjct: 285 STDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDI-RSWGLAEGSLLT 343
Query: 256 SLTGH-VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE----YNKAPVQP--GSMDSESGI 308
+ G + L+++ + LF+ GD+ + +D + Y + GS++ E +
Sbjct: 344 NFESEKTGIINTLSIN-QDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSV 402
Query: 309 FSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHP 344
TFD +G RLIT EADK++K++K+D++AT+ES P
Sbjct: 403 LCSTFDKTGLRLITGEADKSIKIWKQDETATKESEP 438
Score = 190 (71.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
+IR Y+GHLS V T+S+HPT+D++ TAGRDS ++WD+RT+ V TL GH I V
Sbjct: 216 IIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCT 275
Query: 85 ASEPQV 90
+PQV
Sbjct: 276 PVDPQV 281
Score = 37 (18.1 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 345 VITGSHDCTIRLW 357
+ITG D +I++W
Sbjct: 414 LITGEADKSIKIW 426
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 108/240 (45%), Positives = 151/240 (62%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
KP+WH P+KLYRVI GH GWV CV V+ NEWFATGS D++IK+WDLA+ KLKL+LTGH+
Sbjct: 269 KPKWHFPYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHI 328
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
S+R + +S ++PYLFSCG+D VKCWDLEYNK V SG++ ++ S L+
Sbjct: 329 NSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNK--VIRDYHGHLSGVYCLSLHPSLDLLM 386
Query: 322 TTEADKTVKLY--KEDDSA--------------TEESHP-VITGSHDCTIRLWDLAAGKS 364
+ D V+++ + S ++ P V++GS D IRLWDL GK
Sbjct: 387 SGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC 446
Query: 365 LCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNE 424
+LT+HKKS+RS+++HP Y F S DN+K W + +F +N+ G N+IIN + +
Sbjct: 447 RISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQD 506
Score = 257 (95.5 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 49/119 (41%), Positives = 74/119 (62%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
V++GS D IRLWDL GK +LT+HKKS+RS+++HP Y F S DN+K W + +
Sbjct: 427 VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAE 486
Query: 405 FIQNLPGHNAIINSICV------NNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
F +N+ G N+IIN + N+ +L+ G++NG + F+DW +GY + L + V G
Sbjct: 487 FDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPG 545
Score = 225 (84.3 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIR YHGHLS V +SLHP++D+L++ GRD+ RVWD+RTK++V+ L+GHT T+ S+ +Q
Sbjct: 362 VIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 85 ASEPQV 90
+ EPQV
Sbjct: 422 SVEPQV 427
Score = 148 (57.2 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H +R +++ P F + D + KVW A + ++TG S+ ++ + P
Sbjct: 450 LTHHKKSIRSLSIHPFEYSFCSCGTDNV-KVWCGADAEFDRNITGF-NSIINCSLIKQDP 507
Query: 275 Y-----LFSCGDDRT---VKCWDLEYN----KAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
Y + G + W Y V PG+++ E+ SM FD S SRLIT
Sbjct: 508 YFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLIT 567
Query: 323 TEADKTVKLYKEDDSATEESHPV 345
T DK++K++KE++ AT E+ P+
Sbjct: 568 THGDKSIKIWKENEDATPENFPI 590
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP-TLYMFASASPDNIKQWKCPEGKF 405
TGS+D I++WDLA+ K TLT H S+R + + Y+F+ + +K W K
Sbjct: 303 TGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKV 362
Query: 406 IQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRT 443
I++ GH + + + ++ +L+SG + + WD RT
Sbjct: 363 IRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Score = 89 (36.4 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+ KLKL+LTGH+ S+R + + S N P L + G D+ + W
Sbjct: 312 IWDLASCKLKLTLTGHINSIRDIKI--------SKKN-----P---YLFSCGEDNRVKCW 355
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 356 DLEYNKVIRDYHGHLSGV 373
Score = 78 (32.5 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GH VN + + + + T D ++WD+ + TLTGH N+I + P
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDL GK ++SLT H S+R L++
Sbjct: 438 LWDLNNGKCRISLTHHKKSIRSLSI 462
Score = 65 (27.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWD+ T L+GH G+V S+ + S+ P + ++ +D R+W
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVM-------------SICSQSVEPQV---VSGSQDKMIRLW 439
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ +LT H +I S+
Sbjct: 440 DLNNGKCRISLTHHKKSIRSL 460
Score = 48 (22.0 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNH--------KKSVRSVALHP 382
L K+D + S +I GS++ + +D ++G TL+N + S S+A
Sbjct: 502 LIKQDPYFNDSSI-LILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDK 560
Query: 383 TLYMFASASPD-NIKQWKCPEGKFIQNLP 410
+ + D +IK WK E +N P
Sbjct: 561 SESRLITTHGDKSIKIWKENEDATPENFP 589
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 108/240 (45%), Positives = 151/240 (62%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
KP+WH P+KLYRVI GH GWV CV V+ NEWFATGS D++IK+WDLA+ KLKL+LTGH+
Sbjct: 269 KPKWHFPYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHI 328
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
S+R + +S ++PYLFSCG+D VKCWDLEYNK V SG++ ++ S L+
Sbjct: 329 NSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNK--VIRDYHGHLSGVYCLSLHPSLDLLM 386
Query: 322 TTEADKTVKLY--KEDDSA--------------TEESHP-VITGSHDCTIRLWDLAAGKS 364
+ D V+++ + S ++ P V++GS D IRLWDL GK
Sbjct: 387 SGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC 446
Query: 365 LCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNE 424
+LT+HKKS+RS+++HP Y F S DN+K W + +F +N+ G N+IIN + +
Sbjct: 447 RISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQD 506
Score = 257 (95.5 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 49/119 (41%), Positives = 74/119 (62%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
V++GS D IRLWDL GK +LT+HKKS+RS+++HP Y F S DN+K W + +
Sbjct: 427 VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAE 486
Query: 405 FIQNLPGHNAIINSICV------NNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
F +N+ G N+IIN + N+ +L+ G++NG + F+DW +GY + L + V G
Sbjct: 487 FDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPG 545
Score = 225 (84.3 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
VIR YHGHLS V +SLHP++D+L++ GRD+ RVWD+RTK++V+ L+GHT T+ S+ +Q
Sbjct: 362 VIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 85 ASEPQV 90
+ EPQV
Sbjct: 422 SVEPQV 427
Score = 148 (57.2 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++ H +R +++ P F + D + KVW A + ++TG S+ ++ + P
Sbjct: 450 LTHHKKSIRSLSIHPFEYSFCSCGTDNV-KVWCGADAEFDRNITGF-NSIINCSLIKQDP 507
Query: 275 Y-----LFSCGDDRT---VKCWDLEYN----KAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
Y + G + W Y V PG+++ E+ SM FD S SRLIT
Sbjct: 508 YFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLIT 567
Query: 323 TEADKTVKLYKEDDSATEESHPV 345
T DK++K++KE++ AT E+ P+
Sbjct: 568 THGDKSIKIWKENEDATPENFPI 590
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP-TLYMFASASPDNIKQWKCPEGKF 405
TGS+D I++WDLA+ K TLT H S+R + + Y+F+ + +K W K
Sbjct: 303 TGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKV 362
Query: 406 IQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRT 443
I++ GH + + + ++ +L+SG + + WD RT
Sbjct: 363 IRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Score = 89 (36.4 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLA+ KLKL+LTGH+ S+R + + S N P L + G D+ + W
Sbjct: 312 IWDLASCKLKLTLTGHINSIRDIKI--------SKKN-----P---YLFSCGEDNRVKCW 355
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + GH + +
Sbjct: 356 DLEYNKVIRDYHGHLSGV 373
Score = 78 (32.5 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
GH VN + + + + T D ++WD+ + TLTGH N+I + P
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
+WDL GK ++SLT H S+R L++
Sbjct: 438 LWDLNNGKCRISLTHHKKSIRSLSI 462
Score = 65 (27.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWD+ T L+GH G+V S+ + S+ P + ++ +D R+W
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVM-------------SICSQSVEPQV---VSGSQDKMIRLW 439
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ +LT H +I S+
Sbjct: 440 DLNNGKCRISLTHHKKSIRSL 460
Score = 48 (22.0 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNH--------KKSVRSVALHP 382
L K+D + S +I GS++ + +D ++G TL+N + S S+A
Sbjct: 502 LIKQDPYFNDSSI-LILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDK 560
Query: 383 TLYMFASASPD-NIKQWKCPEGKFIQNLP 410
+ + D +IK WK E +N P
Sbjct: 561 SESRLITTHGDKSIKIWKENEDATPENFP 589
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 275 (101.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 66/185 (35%), Positives = 99/185 (53%)
Query: 177 NQLVPTTASNTQIIQQAK---AKALPMPKPQWHAPWKLYRVISG-HLGWVRCVAV-EPGN 231
N+L P ++ I Q A P + A WKL R ++G H GW+R +A+ E N
Sbjct: 40 NKL-PKSSEENNINDQTNQLIVSAAPESEDSPAAEWKLLRTLAGAHQGWIRAIALDEITN 98
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
+W+ TGSAD IK+WD LK LTGHV +R L +S RHPYLFS G+D++++CWDLE
Sbjct: 99 KWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLE 158
Query: 292 YNK--APVQPGSMDSE-SGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITG 348
+ A Q S G++S+ L + D V+++ D + E+ ++
Sbjct: 159 RSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW--DIRSRVEAMTLLGH 216
Query: 349 SHDCT 353
++D T
Sbjct: 217 TNDIT 221
Score = 198 (74.8 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
IR YHGHL V +I LHP +DVL + G+D RVWD+R++ TL GHTN I S+ T
Sbjct: 168 IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDY 227
Query: 86 SEPQVGTKTV 95
++PQV T ++
Sbjct: 228 NDPQVITSSM 237
Score = 186 (70.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 51/139 (36%), Positives = 74/139 (53%)
Query: 339 TEESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASA-SPDNIK 396
T+ + P VIT S D TIRLWDL K+ +TNH KS+RS+ HP F S S IK
Sbjct: 225 TDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIK 284
Query: 397 QWKCPEGKFIQ---------NLPGHNAIINSICVNN-EGVLVSGADNGTMCFWDWRTGYN 446
QW P+G+ + N ++ IIN++ +N L SG D+G + F+++ TG
Sbjct: 285 QWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKLEFYNYTTGNL 344
Query: 447 FQRLQVRCVSGFPKPSVFF 465
Q Q ++G P+ S +
Sbjct: 345 QQSGQSPSLAG-PEQSAIY 362
Score = 120 (47.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R GHLG V + + P + +G D +++VWD+ + ++L GH + +
Sbjct: 169 RSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYN 228
Query: 273 HPYLFSCGDDRTVKCWDLEYNK 294
P + + D T++ WDL +K
Sbjct: 229 DPQVITSSMDGTIRLWDLRKSK 250
Score = 105 (42.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/172 (22%), Positives = 70/172 (40%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH + + + + T S D I++WDL K +L +T H S+R + P+
Sbjct: 215 GHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATF 274
Query: 277 FSCGDDRTVKCWDL-------EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
S + +K W L E+ + + P D+ I ++ + + L + D +
Sbjct: 275 VSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKL 334
Query: 330 KLYKEDDSATEES--HPVITGSHDCTI--RLWDLAAGKSLCTLTNH-KKSVR 376
+ Y ++S P + G I +D++ L LT H KS+R
Sbjct: 335 EFYNYTTGNLQQSGQSPSLAGPEQSAIYASTFDMSG---LRLLTCHGDKSIR 383
Score = 103 (41.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKL-------KLSLTGHVGS--V 264
+I+ H +R + P F +G ++ IK W L G+L +LS S +
Sbjct: 254 LITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRII 313
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS-----ESGIFSMTFDNSGSR 319
L ++P LFS DD ++ ++ Q G S +S I++ TFD SG R
Sbjct: 314 NTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQ-QSGQSPSLAGPEQSAIYASTFDMSGLR 372
Query: 320 LITTEADKTVKLY 332
L+T DK+++++
Sbjct: 373 LLTCHGDKSIRIW 385
Score = 99 (39.9 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL-HPTLYMFASASPDNIKQWKCPEG 403
+ +G DC +R+WD+ + TL H + S+ + + S+ I+ W +
Sbjct: 190 LFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKS 249
Query: 404 KFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFW 439
K + H+ I S+ + E VSG NG + W
Sbjct: 250 KTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 71 (30.1 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD LK LTGHV +R L + + HP L + G D + R W
Sbjct: 112 IWDFENNSLKAVLTGHVLGIRSLCISKR-------------HP---YLFSGGEDKSLRCW 155
Query: 61 DV-RTKAN----VYTLTGHTNTIASV 81
D+ R+ ++ + + GH + S+
Sbjct: 156 DLERSNSDAGCQIRSYHGHLGGVYSI 181
Score = 66 (28.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 32 HLSSVNTISLHP-TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
H + I+L T +T DST ++WD + LTGH I S+ P
Sbjct: 84 HQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHP 141
Score = 52 (23.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS-----LTG-HVGSVRGLTVSPRHPY 275
+ +A+ P +G D ++ ++ TG L+ S L G ++ T
Sbjct: 313 INTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQQSGQSPSLAGPEQSAIYASTFDMSGLR 372
Query: 276 LFSCGDDRTVKCWDLEY 292
L +C D++++ W Y
Sbjct: 373 LLTCHGDKSIRIWGTSY 389
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 275 (101.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 66/185 (35%), Positives = 99/185 (53%)
Query: 177 NQLVPTTASNTQIIQQAK---AKALPMPKPQWHAPWKLYRVISG-HLGWVRCVAV-EPGN 231
N+L P ++ I Q A P + A WKL R ++G H GW+R +A+ E N
Sbjct: 40 NKL-PKSSEENNINDQTNQLIVSAAPESEDSPAAEWKLLRTLAGAHQGWIRAIALDEITN 98
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
+W+ TGSAD IK+WD LK LTGHV +R L +S RHPYLFS G+D++++CWDLE
Sbjct: 99 KWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLE 158
Query: 292 YNK--APVQPGSMDSE-SGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITG 348
+ A Q S G++S+ L + D V+++ D + E+ ++
Sbjct: 159 RSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW--DIRSRVEAMTLLGH 216
Query: 349 SHDCT 353
++D T
Sbjct: 217 TNDIT 221
Score = 198 (74.8 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
IR YHGHL V +I LHP +DVL + G+D RVWD+R++ TL GHTN I S+ T
Sbjct: 168 IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDY 227
Query: 86 SEPQVGTKTV 95
++PQV T ++
Sbjct: 228 NDPQVITSSM 237
Score = 186 (70.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 51/139 (36%), Positives = 74/139 (53%)
Query: 339 TEESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASA-SPDNIK 396
T+ + P VIT S D TIRLWDL K+ +TNH KS+RS+ HP F S S IK
Sbjct: 225 TDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIK 284
Query: 397 QWKCPEGKFIQ---------NLPGHNAIINSICVNN-EGVLVSGADNGTMCFWDWRTGYN 446
QW P+G+ + N ++ IIN++ +N L SG D+G + F+++ TG
Sbjct: 285 QWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKLEFYNYTTGNL 344
Query: 447 FQRLQVRCVSGFPKPSVFF 465
Q Q ++G P+ S +
Sbjct: 345 QQSGQSPSLAG-PEQSAIY 362
Score = 120 (47.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R GHLG V + + P + +G D +++VWD+ + ++L GH + +
Sbjct: 169 RSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYN 228
Query: 273 HPYLFSCGDDRTVKCWDLEYNK 294
P + + D T++ WDL +K
Sbjct: 229 DPQVITSSMDGTIRLWDLRKSK 250
Score = 105 (42.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/172 (22%), Positives = 70/172 (40%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH + + + + T S D I++WDL K +L +T H S+R + P+
Sbjct: 215 GHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATF 274
Query: 277 FSCGDDRTVKCWDL-------EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
S + +K W L E+ + + P D+ I ++ + + L + D +
Sbjct: 275 VSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKL 334
Query: 330 KLYKEDDSATEES--HPVITGSHDCTI--RLWDLAAGKSLCTLTNH-KKSVR 376
+ Y ++S P + G I +D++ L LT H KS+R
Sbjct: 335 EFYNYTTGNLQQSGQSPSLAGPEQSAIYASTFDMSG---LRLLTCHGDKSIR 383
Score = 103 (41.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKL-------KLSLTGHVGS--V 264
+I+ H +R + P F +G ++ IK W L G+L +LS S +
Sbjct: 254 LITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRII 313
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS-----ESGIFSMTFDNSGSR 319
L ++P LFS DD ++ ++ Q G S +S I++ TFD SG R
Sbjct: 314 NTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQ-QSGQSPSLAGPEQSAIYASTFDMSGLR 372
Query: 320 LITTEADKTVKLY 332
L+T DK+++++
Sbjct: 373 LLTCHGDKSIRIW 385
Score = 99 (39.9 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL-HPTLYMFASASPDNIKQWKCPEG 403
+ +G DC +R+WD+ + TL H + S+ + + S+ I+ W +
Sbjct: 190 LFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKS 249
Query: 404 KFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFW 439
K + H+ I S+ + E VSG NG + W
Sbjct: 250 KTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 71 (30.1 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD LK LTGHV +R L + + HP L + G D + R W
Sbjct: 112 IWDFENNSLKAVLTGHVLGIRSLCISKR-------------HP---YLFSGGEDKSLRCW 155
Query: 61 DV-RTKAN----VYTLTGHTNTIASV 81
D+ R+ ++ + + GH + S+
Sbjct: 156 DLERSNSDAGCQIRSYHGHLGGVYSI 181
Score = 66 (28.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 32 HLSSVNTISLHP-TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
H + I+L T +T DST ++WD + LTGH I S+ P
Sbjct: 84 HQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHP 141
Score = 52 (23.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS-----LTG-HVGSVRGLTVSPRHPY 275
+ +A+ P +G D ++ ++ TG L+ S L G ++ T
Sbjct: 313 INTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQQSGQSPSLAGPEQSAIYASTFDMSGLR 372
Query: 276 LFSCGDDRTVKCWDLEY 292
L +C D++++ W Y
Sbjct: 373 LLTCHGDKSIRIWGTSY 389
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 270 (100.1 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 73/229 (31%), Positives = 108/229 (47%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ + GH V CV P + + S DK IKVW+ ATG +L GH VR +TVS
Sbjct: 184 KTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED 243
Query: 273 HPYLFSCGDDRTVKCWDLEYNK--APVQPGSMDSESGIFSMT--FDNSGSRLITTEADKT 328
+ SC +D+T+K W++ + A + S E FS D GS L T E
Sbjct: 244 GSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSK 303
Query: 329 VKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFA 388
VK + + + + TGS D TI++W+LA G+ L T H VR+V HP
Sbjct: 304 VKQGPGGNLVGQCGY-LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLL 362
Query: 389 SASPDN-IKQWKCPEGKFIQNL-PGHNAIINSI--CVNNEGVLVSGADN 433
S D I+ W +G+ I+ + H I+ + C++N + G D+
Sbjct: 363 SVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDD 411
Score = 220 (82.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 73/274 (26%), Positives = 124/274 (45%)
Query: 192 QAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG 251
+ K ALP P P+ H +++GH + V P + S D IKVWD +G
Sbjct: 87 RGKEDALPRP-PEKH-------ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESG 138
Query: 252 KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFS 310
+ + +L GH +V+ + L SC D T+K WD + Y+ G + +
Sbjct: 139 EFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGH---DHNVSC 195
Query: 311 MTFDNSGSRLITTEADKTVKLYK------------EDD-----SATEESHPVITGSHDCT 353
+ F SG +LI++ DKT+K+++ +D + +E+ + + S+D T
Sbjct: 196 VRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQT 255
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI--KQWKCPEGKF-IQNLP 410
I+ W++ G+ L T H V +A F++A+ +I PEGK ++ P
Sbjct: 256 IKTWNIVKGECLATYREHSHVVECLA-------FSTANIIDIPGSLLSTPEGKSKVKQGP 308
Query: 411 GHNAIINSICVNNEGVLVSGADNGTMCFWDWRTG 444
G N + C G L +G+ + T+ W+ TG
Sbjct: 309 GGNLV--GQC----GYLATGSRDKTIKIWELATG 336
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 68/285 (23%), Positives = 119/285 (41%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV-VTQA 85
R GH ++V I T ++L + D T ++WD +T V TL GH + ++ V T +
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 86 SEPQVGT---KTVLL-ESCER--IMFVLGTAGFLL--------SCLPSLLDFGTIRPWQL 131
+ + + KT+ + E+ I ++G ++ SC+ S + TI+ W
Sbjct: 202 GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN- 260
Query: 132 QIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQ 191
I++ +C +E H V L F T ++ L+ + E + ++
Sbjct: 261 -IVKGECLATYRE-HSHVVECLAFS----TANIIDIPGSLLSTPEGKSKVKQGPGGNLVG 314
Query: 192 QAKAKALPMPKPQ---WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWD 247
Q A W A + GH WVR V P ++ + DK I+VWD
Sbjct: 315 QCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWD 374
Query: 248 LATGK-LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
+A G+ +K H + L +P++ + G D +K W L+
Sbjct: 375 IAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 129 (50.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
+++ S D TI++WD +G+ TL H +V+ + T + AS S D IK W
Sbjct: 121 MVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTY 180
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRL 450
++ L GH+ ++ + G L+S + + T+ W+ TGY + L
Sbjct: 181 DCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTL 228
Score = 114 (45.2 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + +N++ HP+ ++++A D+T +VWD + TL GHTN + +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDI 154
Score = 38 (18.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 69 YTLTGHTNTIASV 81
+ LTGH N I SV
Sbjct: 100 HILTGHRNCINSV 112
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 291 (107.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 78/249 (31%), Positives = 118/249 (47%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W++ +L + GH W+R VA P + +GS D IK+WDLAT +L+ SL H S
Sbjct: 987 WNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRS 1046
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
V + SP L S D T+K WD + +Q G+ S+TF G L +
Sbjct: 1047 VHAVAFSPDDKQLASSSLDSTIKLWDSATGE--LQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 324 EADKTVKLY-------------KED--DSA--TEESHPVITGSHDCTIRLWDLAAGKSLC 366
D T+KL+ + D DS + + + +G +D TI+LWD A G+ L
Sbjct: 1105 SYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQ 1164
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
TL H ++SV P + AS S D K W G+ +Q GH+ + S+ + +G
Sbjct: 1165 TLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDG 1224
Query: 426 VLVSGADNG 434
L++ + G
Sbjct: 1225 KLLASSSYG 1233
Score = 283 (104.7 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 77/241 (31%), Positives = 117/241 (48%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A +L + + GH G V +A P + A+GS D I +WD ATG+L + GH S
Sbjct: 777 WDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHS 836
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSES-GIFSMTFDNSGSRLIT 322
+ + +P L S DD T+K WDL + +Q ++DS S + S+ F G L +
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLATGE--LQQ-TLDSHSQSVRSVAFSPDGKLLAS 893
Query: 323 TEADKTVKLYKEDDSATEES-------------HP----VITGSHDCTIRLWDLAAGKSL 365
+ D T+K++ ++S P + +GS T++LW+ A G+ L
Sbjct: 894 SSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELL 953
Query: 366 CTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNE 424
TL H +SVRSVA P AS+S D IK W G+ Q GH+ I ++ + +
Sbjct: 954 QTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPD 1013
Query: 425 G 425
G
Sbjct: 1014 G 1014
Score = 268 (99.4 bits), Expect = 9.5e-24, Sum P(2) = 9.5e-24
Identities = 76/240 (31%), Positives = 114/240 (47%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W+ A +L + + G GWV+ VA P + A+GS +K+W+ ATG+L +L GH S
Sbjct: 903 WNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS 962
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
VR + SP L S D T+K W+ + +Q + I ++ F G L++
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWNSTTGE--LQQTFKGHDLWIRAVAFSPDGKHLVSG 1020
Query: 324 EADKTVKLYKEDDSATEES--------HPVI---------TGSHDCTIRLWDLAAGKSLC 366
D T+KL+ S ++S H V + S D TI+LWD A G+
Sbjct: 1021 SDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQR 1080
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
TL H + VRSV P + AS S D IK W G+ Q L G + ++S+ + +G
Sbjct: 1081 TLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Score = 250 (93.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 75/256 (29%), Positives = 116/256 (45%)
Query: 198 LPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL 257
LP + W A + + HLG V V P + +GS D +K+WD ATG+L +L
Sbjct: 732 LPKVEQTWSAE---QQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTL 788
Query: 258 TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSG 317
GH G+V L SP L S D T+ WD + +Q S I+S+ F G
Sbjct: 789 DGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGEL-LQTFEGHPHS-IWSVAFAPDG 846
Query: 318 SRLITTEADKTVKLYK---EDDSATEESH----------P----VITGSHDCTIRLWDLA 360
L + D T+K++ + T +SH P + + S D TI++W+ A
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
G+ +L V+SVA P AS S N +K W G+ +Q L GH+ + S+
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV 966
Query: 420 CVNNEGVLVSGADNGT 435
+ +G ++ + + T
Sbjct: 967 AFSPDGKQLASSSSDT 982
Score = 189 (71.6 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 75/283 (26%), Positives = 124/283 (43%)
Query: 191 QQAKAKALPMPKPQWH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA 249
+Q + +L W A +L R + GH VR V P + A+ S D IK+W+
Sbjct: 1057 KQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPL 1116
Query: 250 TGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDS-ESG 307
TG+L+ +LTG V + SP L S D T+K WD + G D +S
Sbjct: 1117 TGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSV 1176
Query: 308 IFSM--------TFDNSGSRLITTEADKTVKLYK------EDDSATEESHPVITGSHDCT 353
+FS ++D + ++L + +++++ E + + + + + S+ T
Sbjct: 1177 VFSPDGKLLASGSYDQT-AKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGET 1235
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHN 413
I+LWD G+ L TL + +S SVA P AS + K W G+ +Q L GH+
Sbjct: 1236 IKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHS 1295
Query: 414 AIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVS 456
+ S G +S + +C + R + Q Q C+S
Sbjct: 1296 KWVWS----RTGAGISIFLDQWLCLQEKRILWLPQSYQPFCIS 1334
Score = 177 (67.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 42/107 (39%), Positives = 59/107 (55%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+GS T++LW+ A G+ L TL H +SVRSVA P AS+S D IK W G+
Sbjct: 935 SGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGEL 994
Query: 406 IQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
Q GH+ I ++ + +G LVSG+D+ T+ WD T Q L+
Sbjct: 995 QQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE 1041
Score = 177 (67.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 41/107 (38%), Positives = 62/107 (57%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D TI++WDLA G+ TL +H +SVRSVA P + AS+S D+ IK W G+
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 406 IQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
Q+L G + + S+ + +G L SG++ T+ W+ TG Q L+
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE 957
Score = 169 (64.5 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 38/102 (37%), Positives = 56/102 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+++GS+D T+++WD A G+ L TL H +V S+A P + AS S DN I W G
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ +Q GH I S+ +G L S +D+ T+ WD TG
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Score = 86 (35.3 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+++ + GH S+ +++ P L +A DST ++WD+ T TL H+ ++ SV
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSV 882
Score = 85 (35.0 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
HL V ++ P L++ D T ++WD T + TL GH+ T+ S+
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESL 798
Score = 80 (33.2 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD ATG+L +L GH G+V L + P +L + D+T +W
Sbjct: 776 IWDPATGELLQTLDGHSGTVESL----------------AFSPDGKLLASGSYDNTIDLW 819
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D T + T GH ++I SV
Sbjct: 820 DSATGELLQTFEGHPHSIWSV 840
Score = 78 (32.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WDLATG+L+ +L H SVR +++ P +L ++ DST +VW
Sbjct: 860 IWDLATGELQQTLDSHSQSVR----------------SVAFSPDGKLLASSSLDSTIKVW 903
Query: 61 DVRTKANVYTLTGHTNTIASV 81
+ T +L G + + SV
Sbjct: 904 NPATGELQQSLEGRSGWVKSV 924
Score = 72 (30.4 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VW+ ATG+L+ SL G G V+ +++ P L + +T ++W
Sbjct: 902 VWNPATGELQQSLEGRSGWVK----------------SVAFSPDGKKLASGSEKNTVKLW 945
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKT 94
+ T + TL GH+ ++ SV Q+ + +
Sbjct: 946 NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS 979
Score = 72 (30.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 13/67 (19%), Positives = 33/67 (49%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
+ GH + ++ P L++ D+T ++WD+ T +L H+ ++ +V +
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDK 1057
Query: 89 QVGTKTV 95
Q+ + ++
Sbjct: 1058 QLASSSL 1064
Score = 67 (28.6 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+++ GH SV +++ P L ++ D+T ++W+ T T GH I +V
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV 1008
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 221 (82.9 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 64/237 (27%), Positives = 106/237 (44%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
++ + + GH V VA P ++ + S D+ IK+W++ATG + TGH VR +
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
V +C +D+T++ W V+ D E + + + + EA
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKDCKVE--LRDHEHTVECIAWAPEAAASAINEAAGA 300
Query: 329 VKLYKEDDSATEESHPVI-TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMF 387
D+ P + +GS D TIR+WD++ G L TL+ H VR +A HP
Sbjct: 301 ------DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYL 354
Query: 388 ASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNN-EGVLVSGADNGTMCFWDWR 442
SAS D I+ W + ++ L H SI + ++SG+ + T+ W+ R
Sbjct: 355 VSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 75/307 (24%), Positives = 126/307 (41%)
Query: 158 LKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQW--HAPWKLYRVI 215
L++ I Q+ V E +L T + ++I+ A K P +W P K +
Sbjct: 51 LEKKWTSVIRLQKKVMELEAKL---TEAEKEVIEGAPTKNKRTPG-EWIPRPPEKFS--L 104
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
+GH + V P + S D I++WD TG+ + SL GH SV+ + +
Sbjct: 105 TGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
L SC D ++K WD + + ++ + + S+ F +G +++ D+T+K+++
Sbjct: 165 LASCSADLSIKLWDFQQSYECIKT-MHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Query: 336 DS---ATEESHPV--------ITGS------HDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T H I GS +D TIR+W + L +H+ +V +
Sbjct: 224 TGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECI 283
Query: 379 ALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMC 437
A P A+AS N E N GH+ +G L SG+ + T+
Sbjct: 284 AWAPE----AAASAIN-------EAAGADNKKGHH----------QGPFLASGSRDKTIR 322
Query: 438 FWDWRTG 444
WD G
Sbjct: 323 IWDVSVG 329
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HP+ ++ S D TIR+WD G+ +L H SV+ VA + AS S D +IK
Sbjct: 117 HPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKL 176
Query: 398 WKCPEG-KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGY 445
W + + I+ + GH+ ++S+ G ++S + + T+ W+ TGY
Sbjct: 177 WDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY 226
Score = 107 (42.7 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
GH +S+ + HP ++++A D+T R+WD T +L GHT+++ V A
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Score = 66 (28.3 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNTIASV 81
R GH SV ++ +L + D + ++WD + + T+ GH + ++SV
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSV 199
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 220 (82.5 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 59/232 (25%), Positives = 109/232 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK +K+W++ATG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
L SC +D+TV+ W + + + + E + +++ + +EA +
Sbjct: 246 GTLLASCSNDQTVRVWVVATKECKAE--LREHEHVVECISWAPESAHPTISEATGS---- 299
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASP 392
E+ + + +++GS D TI++WD++ G L TL H VR V HP S +
Sbjct: 300 -ENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCAD 358
Query: 393 DN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
D ++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 65/271 (23%), Positives = 113/271 (41%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS T +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERIMFVLGTA-GFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G ++ S ++ M + A G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDH-IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVP-TTASNTQIIQQAKAKALPMPKP 203
V+ V T ++ R H+ + C P + + + T S + + L +
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRD 317
Query: 204 QWHAPWKL-----YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
+ W + + GH WVR V PG + + + DK +++WD + +L+
Sbjct: 318 KTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLS 377
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
H V L PY+ + D+TVK W+
Sbjct: 378 AHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 180 (68.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 43/129 (33%), Positives = 71/129 (55%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP + IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESAHPTISEATGSENKKSGKPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ P ++ SC DD+T++ WD + NK ++ S E + S+ F + ++T
Sbjct: 342 RGVLFHPGGRFVVSCADDKTLRIWDYK-NKRCMKTLSAH-EHFVTSLDFHKASPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 151 (58.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 54/201 (26%), Positives = 84/201 (41%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD G + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------PVITG------SHDCTIRLWDLAA 361
+++ DKT+K+++ T H P G S+D T+R+W +A
Sbjct: 206 HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD AG TL H SV+ ++ T + AS S D IK
Sbjct: 117 HPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + TM W+ TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 326 DKTVKLYKED--DSATEESHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
++T+K + + D + +++ ++ S D TI+LWD + + T+ H +V SVA+ P
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFW 439
SAS D +K W+ G ++ GH + + N +G L++ N T+ W
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 122 (48.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
TGKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESC 100
V T V T TGH + V Q GT LL SC
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPN----QDGT---LLASC 252
Score = 105 (42.0 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH S V + HP ++++A D+T +VWD TL GHT+++ + S Q
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDI----SFDQT 161
Query: 91 GTKTVLLESCERIMFV 106
G LL SC M +
Sbjct: 162 GK---LLASCSADMTI 174
Score = 63 (27.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV--VT 83
++ + GH V + + +L + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 84 QASEPQVGTKT 94
+++ P + T
Sbjct: 287 ESAHPTISEAT 297
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDISTG 328
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 211 (79.3 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 121 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 180
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 181 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 240
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 241 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 293
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 294 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 174 (66.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 135
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 136 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 192
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 193 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 252
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 253 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 308
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 309 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 173 (66.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 219 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 276
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 277 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 334
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 335 VDQTVKVWE 343
Score = 159 (61.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 26 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 83
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 140
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 141 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 200
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 201 KECKAELREHEHVVECISWAP 221
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 52 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 111
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 112 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 160
Score = 119 (46.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 156 VQTGYCVKTFTGHREWVRMV 175
Score = 109 (43.4 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 91
Score = 57 (25.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 162 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 217
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 246 LLSGSRDKTIKMWDVSTG 263
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 234 (87.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 77/289 (26%), Positives = 135/289 (46%)
Query: 174 STENQLVPT-TASNTQIIQQAK-AKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
S ++ T + NT I AK +AL P + H W + S L W + G+
Sbjct: 200 SPNGAMIATGSMDNTVRIWDAKKGQALGAPL-KGHVKW----ITS--LAWEPYHLQQSGH 252
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD-- 289
A+ S D +++WD+ + + + L+GH GSV + +++ DRT+K W+
Sbjct: 253 PRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQ 311
Query: 290 -------LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEES 342
L + V ++ ++ + + D++G ++ ++ADK K + A +
Sbjct: 312 TGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTG-KVPESDADKVAMAKKRFEKAATIN 370
Query: 343 HPVI----TGSHDCTIRLWDL-AAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IK 396
+ ++ + S D T+ LWD ++ K + L H+K V V P + ASA DN +K
Sbjct: 371 NKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVK 430
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
W +GKFI L GH + C + + +LVS + + T+ W+ RTG
Sbjct: 431 LWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTG 479
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 77/342 (22%), Positives = 138/342 (40%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT-KANVYTLTGHTNTIASV- 81
T + GH S V +S P ++ T D+T R+WD + +A L GH I S+
Sbjct: 182 TPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLA 241
Query: 82 -----VTQASEPQVGTKTVLLESCERIMFVLGT-AGFLLS-------CL---------PS 119
+ Q+ P++ + + +S RI V+ A +LS C+ S
Sbjct: 242 WEPYHLQQSGHPRLASASK--DSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTS 299
Query: 120 LLDFGTIRPWQLQI--IQEQCFLNLQEVQRHSVHT-LVFRSLKRTHDMFI--SCQELVPS 174
D TI+ W Q + + + V ++ T + R+ H + S + V
Sbjct: 300 SHD-RTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAM 358
Query: 175 TENQLVPTTASNTQIIQQAKAKALPMPKPQW--HAPWKLYRVISGHLGWVRCVAVEPGNE 232
+ + N +I+++ + + W + K + GH V V P
Sbjct: 359 AKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMA 418
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
+ A+ D +K+W+ GK +L GHVG+V S L S D T+K W++
Sbjct: 419 YIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRT 478
Query: 293 NKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
K PG D +F++ + G ++ + DK +++++
Sbjct: 479 GKLSEDLPGHKDE---VFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 148 (57.2 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 64/242 (26%), Positives = 102/242 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V+SGH G V CV G T S D+ IKVW+ TG L +L+ H V L +S
Sbjct: 277 VLSGHKGSVTCVRWG-GTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDF 335
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT------EA 325
L + D T K + + +K + + + I + + S S T +
Sbjct: 336 -ILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESS 394
Query: 326 DKTV-KLY---KEDDSAT--EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
K V +L KE + T + + + D ++LW+ GK + TL H +V
Sbjct: 395 SKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCC 454
Query: 380 LHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMC 437
+ S+S D +K W GK ++LPGH + ++ + +G V SG + +
Sbjct: 455 FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIR 514
Query: 438 FW 439
W
Sbjct: 515 IW 516
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC-GDDRTVK---CWDL 290
ATGSA +A +K +L + +++G R PY F+ DD+ K D+
Sbjct: 44 ATGSATGPAVSVPVADATVK-NLETLLNTLQGNEEDERVPYRFTFQSDDKDSKDSQTIDI 102
Query: 291 --EYNKAPVQPGSMDSESGIFSMTFDNSGSRL-ITTEADKTVKLYKEDDSATE----ESH 343
+ + ++PG +E I + R+ + ++ + E AT S
Sbjct: 103 LADIYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSS 162
Query: 344 PVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPE 402
+++GS D T R+WD G L TL H V +V+ P M A+ S DN ++ W +
Sbjct: 163 TMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKK 222
Query: 403 GKFI-QNLPGHNAIINSIC-----VNNEGV--LVSGADNGTMCFWD 440
G+ + L GH I S+ + G L S + + T+ WD
Sbjct: 223 GQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWD 268
Score = 93 (37.8 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 31 GHLSSVNTISLHP-TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
GH ++ S P + +++ DSTAR+WD T ++TL GHT+ + +V +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAM 205
Query: 90 VGT 92
+ T
Sbjct: 206 IAT 208
Score = 93 (37.8 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD G+ L L GHV + L YH S HP L +A +DST R+
Sbjct: 217 IWDAKKGQALGAPLKGHVKWITSLAW-EPYHLQQSG------HPR---LASASKDSTVRI 266
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
WDV +K L+GH ++ V
Sbjct: 267 WDVISKRADIVLSGHKGSVTCV 288
Score = 83 (34.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 41/143 (28%), Positives = 61/143 (42%)
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQP--GSMDSESGI-FS--MT------FDN-----SG-- 317
L S DD T+ WD E + PV G + + FS M FDN +G
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
+ ITT +Y+ SA +S +++ S D T+++W++ GK L HK V +
Sbjct: 437 GKFITTLRGHVGAVYQCCFSA--DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFA 494
Query: 378 VALHPTLYMFASASPDN-IKQWK 399
V P S D I+ W+
Sbjct: 495 VDWSPDGQKVGSGGKDKAIRIWR 517
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 212 (79.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 68/271 (25%), Positives = 113/271 (41%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS T +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQIIQQAKAKALPMPKP 203
V+ V T ++ R H+ + C P S+ + + T S T+ + L +
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRD 317
Query: 204 QWHAPWKL-----YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
+ W + + GH WVR V G ++ + + DK ++VWD + +L
Sbjct: 318 KTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLN 377
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
H V L PY+ + D+TVK W+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSTISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDFK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ T + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 123 (48.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
TGKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 59 (25.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH V + + ++ + D T RVW V TK L H + + ++ A
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV-ECISWA 285
Query: 86 SEPQVGT 92
E T
Sbjct: 286 PESSYST 292
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDISTG 328
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 54/201 (26%), Positives = 85/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 140 (54.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 322 TTEADKTVKLYKE--DDSATEESHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T + ++T+K + + +D + + S ++ S D TI+LWD + + T+ H +V SV
Sbjct: 139 TGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNG-TM 436
A+ P SAS D IK W+ G ++ GH + + N +G L++ N T+
Sbjct: 199 AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 437 CFWDWRTGYNFQRLQ-----VRCVSGFPKPS 462
W T L+ V C+S P+ S
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 211 (79.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 212 (79.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 58/232 (25%), Positives = 105/232 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ATG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ S +D+TV+ W + + + + S +++ ++ +T K
Sbjct: 246 GTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V +HP Y+ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + + L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 68/271 (25%), Positives = 114/271 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS T +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + N Q
Sbjct: 201 MPN-GDHIVSASRDKTIKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLIASSS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQIIQQAKAKALPMPKP 203
V+ V T ++ R H+ + C P S ++ T S T+ + L +
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRD 317
Query: 204 QWHAPWKL-----YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
+ W + + GH WVR V V PG ++ + + DK +++WD + +L+
Sbjct: 318 KTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLS 377
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
H V L PY+ + D+TVK W+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ T + AS S D IK
Sbjct: 117 HPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS + + T+ W+ TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
TGKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V T V T TGH + V
Sbjct: 221 VATGYCVKTFTGHREWVRMV 240
Score = 107 (42.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDI 156
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 208 (78.3 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 57/232 (24%), Positives = 104/232 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + + DK IK+W++ TG + TGH VR + +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC +D+TV+ W + + + + S ++S S + +T K
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASAS 391
K +++GS D TI++WD++ G L TL H VR V H ++ + A
Sbjct: 306 KPGPF-------LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W + ++ L H + S+ + +V+G+ + T+ W+ R
Sbjct: 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 173 (66.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W AP Y IS G + +PG + +GS DK IK+WD++TG ++L GH V
Sbjct: 284 W-APESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
RG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399
Query: 325 ADKTVKLYK 333
D+TVK+++
Sbjct: 400 VDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH SV IS + +L + D T ++WD + + T+ GH + ++SV A
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AI 200
Query: 87 EPQVGTKTVLLESCERI-MFVLGTAGFLLSCLPSLLDF-GTIRPWQLQIIQEQCFLNLQE 144
P G V + I M+ + T G+ + ++ +RP Q + C N Q
Sbjct: 201 MPN-GDHIVSAARDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQT 257
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVP-STENQLVPTTASNTQ--------IIQQAKA 195
V+ V T ++ R H+ + C P S+ + + T S T+ ++ ++
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 196 KALPMPKPQWHAPWKL-YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
K + M W + + GH WVR V G ++ + + DK ++VWD +
Sbjct: 318 KTIKM----WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+L H V L PY+ + D+TVK W+
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 201 PKPQW-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
PK +W P + Y +SGH V V P + S D IKVWD TG + +L G
Sbjct: 91 PK-EWIPRPPEKY-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGS 318
H SV+ ++ L SC D T+K WD + + G + S + M +G
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD 205
Query: 319 RLITTEADKTVKLYKEDDS---ATEESH--------P------VITGSHDCTIRLWDLAA 361
+++ DKT+K+++ T H P + + S+D T+R+W +A
Sbjct: 206 HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265
Query: 362 GKSLCTLTNHKKSVRSVALHP 382
+ L H+ V ++ P
Sbjct: 266 KECKAELREHEHVVECISWAP 286
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 343 HPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQ 397
HPV ++ S D TI++WD G TL H SV+ ++ + + AS S D IK
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGY 445
W + I+ + GH+ ++S+ + G +VS A + T+ W+ +TGY
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY 225
Score = 119 (46.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 6 TGKLKLS----LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+GKL S +T + +G IR HGH +V+++++ P D +++A RD T ++W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 62 VRTKANVYTLTGHTNTIASV 81
V+T V T TGH + V
Sbjct: 221 VQTGYCVKTFTGHREWVRMV 240
Score = 109 (43.4 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 156
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ + GH V + + ++ + D T RVW V TK L H + + +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 427 LVSGADNGTMCFWDWRTG 444
L+SG+ + T+ WD TG
Sbjct: 311 LLSGSRDKTIKMWDVSTG 328
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 228 (85.3 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 73/242 (30%), Positives = 118/242 (48%)
Query: 219 LGWVRCVAVEPGNE-WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
L W V+PG++ A+ S D IK+WD + + +++GH SV + + L+
Sbjct: 235 LSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLY 293
Query: 278 SCGDDRTVKCWDLEYN-------KAP---VQPGSMDSESGIFSMTFDNSGSRLITTEA-- 325
S DRTV+ WD+ K+ V S+ ++ + FD++G + T E
Sbjct: 294 SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQ 353
Query: 326 DKTVKLYKEDDSATEESHPV-ITGSHDCTIRLWD-LAAGKSLCTLTNHKKSVRSVALHPT 383
K ++ Y++ S + +T S D T+ LW+ L + K + +T H+K V VA P
Sbjct: 354 KKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPD 413
Query: 384 LYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDW 441
SAS DN IK W +GKFI GH A + + +++ +LVS + + T+ WD
Sbjct: 414 GRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Query: 442 RT 443
RT
Sbjct: 474 RT 475
Score = 158 (60.7 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 61/223 (27%), Positives = 94/223 (42%)
Query: 125 TIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELV---PSTENQLVP 181
T+R W + Q +C +N+ + H V+ L SL + + I + PST +
Sbjct: 300 TVRVWDINS-QGRC-INILKSHAHWVNHL---SLSTDYALRIGAFDHTGKKPSTPEEAQK 354
Query: 182 TTASNTQIIQQAKAKALPMPKPQ--------WHAPWKLYRVIS---GHLGWVRCVAVEPG 230
N + I + + M W+ P K + I+ GH V VA P
Sbjct: 355 KALENYEKICKKNGNSEEMMVTASDDYTMFLWN-PLKSTKPIARMTGHQKLVNHVAFSPD 413
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
+ + S D IK+WD GK + GHV SV + S L SC D T+K WD+
Sbjct: 414 GRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Query: 291 EYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
K V PG D ++++ + G R+ + DK V+L+
Sbjct: 474 RTRKLSVDLPGHKDE---VYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 147 (56.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 44/136 (32%), Positives = 58/136 (42%)
Query: 162 HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGW 221
H I C P T +++V NT I + PM H + GH W
Sbjct: 142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT-PM-----HT-------LKGHYNW 188
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH------- 273
V CV+ P E ATGS D I++WD +G+ L +L GH + L+ P H
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSK 248
Query: 274 PYLFSCGDDRTVKCWD 289
P L S D T+K WD
Sbjct: 249 PRLASSSKDGTIKIWD 264
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVALHPTLYM-------FA 388
S + + + TGS D TIRLWD +G+ L L H K + S++ P + A
Sbjct: 193 SWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLA 252
Query: 389 SASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNF 447
S+S D IK W + GH ++ + +G+L SG+ + T+ WD +
Sbjct: 253 SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINS---- 308
Query: 448 QRLQVRCVSGFPKPSVFFFFLAFS--YLNRVGVF 479
Q RC++ + + L+ S Y R+G F
Sbjct: 309 ---QGRCINILKSHAHWVNHLSLSTDYALRIGAF 339
Score = 108 (43.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+++ S D +I+LWD GK + T H SV VA + S S D +K W
Sbjct: 417 IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Query: 404 KFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFW 439
K +LPGH + ++ + +G V SG + + W
Sbjct: 477 KLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 91 (37.1 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 31 GHLSSVNTISLHP-TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH S++ + P T ++T D+TAR+WD T+ ++TL GH N + V
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCV 192
Score = 82 (33.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
L ++ +D T ++WD ++ YT++GHTN+++ V
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCV 284
Score = 71 (30.1 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVY-TLTGHTNTIASV 81
GH + V +S P +V+ T D+T R+WD ++ + L GH+ I S+
Sbjct: 184 GHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSL 235
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNTI 78
GH +SV+ + +L + D T RVWD+ ++ + L H + +
Sbjct: 276 GHTNSVSCVKWGGQ-GLLYSGSHDRTVRVWDINSQGRCINILKSHAHWV 323
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 230 (86.0 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 70/230 (30%), Positives = 103/230 (44%)
Query: 215 ISGHLGWVRCVAVE-PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ GH V +A P + ATGS DK K+W TGK + GH + L+ +P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ + D T K WD++ + V +E I S++FD SG R+IT D TV ++
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE--IISLSFDTSGDRIITGSFDHTVVVWD 247
Query: 334 ---------------EDDSA--TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
E SA + + ++TGS D T LWD +GK + TLT H +
Sbjct: 248 ASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEIL 307
Query: 377 SVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEG 425
T + A+AS D + + K I L GH I+ I N +G
Sbjct: 308 DSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQG 357
Score = 188 (71.2 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 66/258 (25%), Positives = 101/258 (39%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K Y GH + C++ P + ATGS D K+WD+ +G+ ++LTGH+
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE 221
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYN-KAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+ L+ + + D TV WD K G + I S F S ++T
Sbjct: 222 IISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC---AEISSALFSWDCSLILT 278
Query: 323 TEADKTVKLYKEDDS---ATEESHP--------------VITGSHDCTIRLWDLAAGKSL 365
DKT L+ AT H + T S D T R+++ K +
Sbjct: 279 GSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCI 338
Query: 366 CTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNE 424
L H+ + ++ +P + S D + W G+ +Q L GH I S N +
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 425 GVLVSGADNGTMCFWDWR 442
G +V C WR
Sbjct: 399 GNIVITGSKDNSCRI-WR 415
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 63/239 (26%), Positives = 102/239 (42%)
Query: 166 ISCQELVPSTE-NQLVPTTASNTQIIQQAKAKALPM------PKPQWHAP--WKLYRVIS 216
I EL PST+ N LV +I ++ K + + K + H + L++V+
Sbjct: 30 IDLLELSPSTDVNTLVGEIQKVEPLITASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLR 89
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
H+ + VA+ F TGS D+ KVWD A+G+ +L GH V + + +
Sbjct: 90 AHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 277 FSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY--- 332
+ G D+T K W E K +E I ++F+ + + T D T KL+
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAE--IVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 333 KEDDSATEESH--------------PVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
++ T H +ITGS D T+ +WD + G+ + TL H + S
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISS 266
Score = 148 (57.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEG 403
++TGS D T LWD +GK + TLT H + T + A+AS D + +
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
K I L GH I+ I N +G L++G+ + T WD +TG Q L+
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE 384
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH-PTLYMFASASPDNI-KQWKCPEG 403
ITGS+D T ++WD A+G+ L TL H+ V ++A + P A+ S D K W G
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVS-GADNGTMCFWDWRTG 444
K GH A I + N + +V+ G+ + T WD ++G
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Score = 109 (43.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
+ GH + + +S +P V+ T D+TA++WD+++ V TLTGH I S+ S
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGD 232
Query: 89 QVGT 92
++ T
Sbjct: 233 RIIT 236
Score = 96 (38.9 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG + T + ++ + GHL+ + ++S + D +IT D T VWD
Sbjct: 192 VATGSM--DTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Query: 64 TKANVYTLTGHTNTIASVV 82
T V+TL GH I+S +
Sbjct: 250 TGRKVHTLIGHCAEISSAL 268
Score = 83 (34.3 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H+ + ++L+ IT D T +VWD + ++TL GH N + ++
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAI 140
Score = 72 (30.4 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 31 GHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
GH + V I+ + P D + T D T ++W T +T GHT A +V + PQ
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHT---AEIVCLSFNPQ 188
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 228 (85.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 67/230 (29%), Positives = 103/230 (44%)
Query: 215 ISGHLGWVRCVAVE-PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ GH V +A P + ATGS DK K+W + TGK + GH + L+ +P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ + D T K WD++ + +E I S++F+ SG+R+IT D TV +++
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE--IISLSFNTSGNRIITGSFDHTVTVWE 247
Query: 334 EDDS---------ATEESHPV--------ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
D E S V +TGS D T +LWD GK + TLT H +
Sbjct: 248 ADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEIL 307
Query: 377 SVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEG 425
T + A+AS D + + + + L GH I+ I N +G
Sbjct: 308 DSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG 357
Score = 189 (71.6 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 63/251 (25%), Positives = 105/251 (41%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K Y GH + C++ P + ATGS D K+WD+ +G+ +LTGH + L+
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ + + D TV W+ + + +E I S F+ S ++T DKT
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAE--ISSAVFNWDCSLILTGSMDKTC 285
Query: 330 KLYK-------------ED---DSATEESHPVI-TGSHDCTIRLWDLAAGKSLCTLTNHK 372
KL+ +D DS + + +I T S D T R++ A + + L H+
Sbjct: 286 KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHE 345
Query: 373 KSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
+ ++ +P + S D + W G+ +Q L GH I S N +G ++
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 405
Query: 432 DNGTMCFWDWR 442
C WR
Sbjct: 406 SKDNTCRI-WR 415
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/201 (24%), Positives = 86/201 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L++V+ H+ + VA+ F TGS D+ K+WD A+G+ +L GH V + +
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 271 PRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ + G D+T K W +E K +E I ++F+ + + T D T
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAE--IVCLSFNPQSTLVATGSMDTTA 201
Query: 330 KLY---KEDDSATEESHP--------------VITGSHDCTIRLWDLAAGKSLCTLTNHK 372
KL+ ++ T H +ITGS D T+ +W+ G+ + TL H
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 373 KSVRSVALHPTLYMFASASPD 393
+ S + + + S D
Sbjct: 262 AEISSAVFNWDCSLILTGSMD 282
Score = 143 (55.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH-PTLYMFASASPDNI-KQWKCPEG 403
ITGS+D T +LWD A+G+ L TL H+ V ++A + P A+ S D K W G
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVS-GADNGTMCFWDWRTG 444
K GH A I + N + LV+ G+ + T WD ++G
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Score = 142 (55.0 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEG 403
++TGS D T +LWD GK + TLT H + T + A+AS D + +
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
+ + L GH I+ I N +G L++G+ + T WD +TG Q L+
Sbjct: 336 ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/141 (28%), Positives = 63/141 (44%)
Query: 316 SGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
SG L T E + V +Y + + TGS D T +LW + GK T H +
Sbjct: 123 SGEELHTLEGHRNV-VYAIAFN-NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI 180
Query: 376 RSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADN 433
++ +P + A+ S D K W G+ + L GH+A I S+ N G +++G+ +
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 434 GTMCFWDWRTGYNFQRLQVRC 454
T+ W+ TG L C
Sbjct: 241 HTVTVWEADTGRKVYTLIGHC 261
Score = 112 (44.5 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG T + SV + GH + + +S +P ++ T D+TA++WD++
Sbjct: 150 IATGSF--DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 64 TKANVYTLTGHTNTIASVVTQASEPQVGT 92
+ V+TLTGH+ I S+ S ++ T
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIIT 236
Score = 92 (37.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG + T + ++ + GH + + ++S + + + +IT D T VW+
Sbjct: 192 VATGSM--DTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 64 TKANVYTLTGHTNTIASVV 82
T VYTL GH I+S V
Sbjct: 250 TGRKVYTLIGHCAEISSAV 268
Score = 81 (33.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H+ + ++L+ + IT D T ++WD + ++TL GH N + ++
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAI 140
Score = 76 (31.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 31 GHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
GH + V I+ + P D + T D T ++W V T +T GHT A +V + PQ
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT---AEIVCLSFNPQ 188
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 265 (98.3 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 82/267 (30%), Positives = 114/267 (42%)
Query: 187 TQIIQQAKAKALPMPKPQWHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKV 245
T I+ + +P+ W + + GH W+ V P A+GS D IK+
Sbjct: 8 TDIVDCINTLQSTLQRPKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKL 67
Query: 246 WDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP-VQPGSMDS 304
WD A+G LK +L GH SV+ + SP L S D T+K W+ + G D
Sbjct: 68 WDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDR 127
Query: 305 -ESGIFSMTFD--NS--GSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
ES FS N GS T E L + + + + +GS + TI+LWD
Sbjct: 128 VESVAFSPNGQLWNPAIGSLKHTIEGHSDWVL---SVAFSPDGQLLASGSAEKTIKLWDS 184
Query: 360 AAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINS 418
A TL H V + P + AS S D IK W P G L GH+ I S
Sbjct: 185 ATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIES 244
Query: 419 ICVNNEG-VLVSGADNGTMCFWDWRTG 444
+ + G +L SG+ + T+ WD TG
Sbjct: 245 LAFSPNGQLLASGSSDATIKLWDTATG 271
Score = 191 (72.3 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 55/157 (35%), Positives = 75/157 (47%)
Query: 201 PKPQ-WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
P Q W+ A L I GH WV VA P + A+GSA+K IK+WD AT LK +L
Sbjct: 135 PNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG 194
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSG 317
GH V L SP L S +D T+K WD +++ S I S+ F +G
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK---HTLEGHSNKIESLAFSPNG 251
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
L + +D T+KL+ D+AT + G D +
Sbjct: 252 QLLASGSSDATIKLW---DTATGSFRHTLKGHSDMVL 285
Score = 155 (59.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 67/222 (30%), Positives = 92/222 (41%)
Query: 244 KVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD-----LEYNKAP-- 296
++W+ A G LK ++ GH V + SP L S ++T+K WD L++
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 297 --VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEES---HP----VIT 347
V P + S G + N + + ++K E S ES P + +
Sbjct: 198 NWVLP-LVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 348 GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG--K 404
GS D TI+LWD A G TL H V SV P + S S DN IK W G K
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILK 316
Query: 405 FIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRTGY 445
PG I+ SI + E L++ GT W TGY
Sbjct: 317 HSMRTPG---IVRSIEFSIELPQLITNL--GTFSIQAWHTGY 353
Score = 149 (57.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 205 WHAP-WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W P L + GH + +A P + A+GS+D IK+WD ATG + +L GH
Sbjct: 224 WDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDM 283
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWD 289
V + SP L S D T+K WD
Sbjct: 284 VLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 103 (41.3 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 205 WHAPWKLYR-VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +R + GH V V P ++ +GS D IK+WD ATG LK S+ G
Sbjct: 266 WDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTP-GI 324
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
VR + S P L + +++ W Y
Sbjct: 325 VRSIEFSIELPQLITNLGTFSIQAWHTGY 353
Score = 87 (35.7 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH SSV +++ P +L + D+T ++W+ + + +T+ GH++ + SV
Sbjct: 81 GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESV 131
Score = 81 (33.6 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + T++ P +L + D+T ++WD + TL GH++++ SV
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Score = 80 (33.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV-------------IRH-YHGHLSSVNTISLHPTID 46
+W+ A+ LK ++ GH V + ++H GH V +++ P
Sbjct: 109 LWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQ 168
Query: 47 VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
+L + + T ++WD T +TL GH+N + +V
Sbjct: 169 LLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLV 204
Score = 74 (31.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + P +L + D+T ++WD + + +TL GH+N I S+
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 228 (85.3 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 68/230 (29%), Positives = 101/230 (43%)
Query: 215 ISGHLGWVRCVAVE-PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ GH V +A P + ATGS DK K+W + TGK + GH + L+ +P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ + D T K WD++ + +E I S++F+ SG R+IT D TV ++
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAE--IISLSFNTSGDRIITGSFDHTVVVWD 247
Query: 334 EDDS---------ATEESHP--------VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
D E S ++TGS D T +LWD GK + TLT H +
Sbjct: 248 ADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEIL 307
Query: 377 SVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEG 425
T + A+AS D + + K I L GH I+ I N +G
Sbjct: 308 DSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG 357
Score = 197 (74.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 64/252 (25%), Positives = 103/252 (40%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K Y GH + C++ P + ATGS D K+WD+ G+ +L GH + L+
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYN-KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+ + + D TV WD + K + G + I S +F+ S ++T DKT
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC---AEISSASFNWDCSLILTGSMDKT 284
Query: 329 VKLYKEDDS---ATEESHP--------------VITGSHDCTIRLWDLAAGKSLCTLTNH 371
KL+ + AT H + T S D T R++ A K + L H
Sbjct: 285 CKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGH 344
Query: 372 KKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSG 430
+ + ++ +P ++ +S + W G+ +Q L GH I S N +G +V
Sbjct: 345 EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVIT 404
Query: 431 ADNGTMCFWDWR 442
C WR
Sbjct: 405 GSKDNTCRI-WR 415
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/233 (24%), Positives = 101/233 (43%)
Query: 183 TASNTQ----IIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGS 238
TAS T+ +IQ+ + K + + H + L++V+ H+ + VA+ F TGS
Sbjct: 56 TASRTEQVKLLIQRLQEK---LGQNSNHT-FYLFKVLKAHILPLTNVALNKSGSCFITGS 111
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD-DRTVKCWDLEYNKAPV 297
D+ K+WD A+G+ +L GH V + + + + G D+T K W +E K
Sbjct: 112 YDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query: 298 QPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY---KEDDSATEESHP---------- 344
+E I ++F+ + + T D T KL+ ++ T H
Sbjct: 172 TFRGHTAE--IVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNT 229
Query: 345 ----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
+ITGS D T+ +WD G+ + L H + S + + + + S D
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMD 282
Score = 147 (56.8 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEG 403
++TGS D T +LWD GK + TLT H + T + A+AS D + +
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
K I L GH I+ I N +G L++G+ + T WD +TG Q L+
Sbjct: 336 KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 143 (55.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 41/141 (29%), Positives = 63/141 (44%)
Query: 316 SGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
SG L T E + V +Y + + TGS D T +LW + GK T H +
Sbjct: 123 SGEELNTLEGHRNV-VYAIAFN-NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI 180
Query: 376 RSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADN 433
++ +P + A+ S D K W G+ + L GH+A I S+ N G +++G+ +
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
Query: 434 GTMCFWDWRTGYNFQRLQVRC 454
T+ WD TG L C
Sbjct: 241 HTVVVWDADTGRKVNILIGHC 261
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/102 (36%), Positives = 52/102 (50%)
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH-PTLYMFASASPDNI-KQWKCPEG 403
ITGS+D T +LWD A+G+ L TL H+ V ++A + P A+ S D K W G
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVS-GADNGTMCFWDWRTG 444
K GH A I + N + LV+ G+ + T WD + G
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209
Score = 110 (43.8 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG T + SV + GH + + +S +P ++ T D+TA++WD++
Sbjct: 150 IATGSF--DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 64 TKANVYTLTGHTNTIASVVTQASEPQVGT 92
VYTL GH+ I S+ S ++ T
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIIT 236
Score = 83 (34.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG + T + ++ + GH + + ++S + + D +IT D T VWD
Sbjct: 192 VATGSM--DTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 64 TKANVYTLTGHTNTIAS 80
T V L GH I+S
Sbjct: 250 TGRKVNILIGHCAEISS 266
Score = 77 (32.2 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H+ + ++L+ + IT D T ++WD + + TL GH N + ++
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAI 140
Score = 76 (31.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 31 GHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
GH + V I+ + P D + T D T ++W V T +T GHT A +V + PQ
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT---AEIVCLSFNPQ 188
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 156 (60.0 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K PG D ++++ + G R+ + DK +++++
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAADLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 435
Score = 142 (55.0 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ +W A K L +T H+ + V P + ASAS D +IK W
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 355 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 393
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 47/199 (23%), Positives = 89/199 (44%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCQGHRH---WVLSISWSP 117
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R++ + L E A E + + S D
Sbjct: 118 DGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDG 177
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ LT H +SV + +++++ IK W+ +G + L GH
Sbjct: 178 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 237
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 238 GHWVNTMALSTDYALRTGA 256
Score = 128 (50.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 62/251 (24%), Positives = 104/251 (41%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH V C+ G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 191 RILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 249
Query: 273 HPY---LFSCGD----------------DRTVKCWDLEYNKAPVQ--PGSMDSESGIFSM 311
+ F + DR ++ ++L + P + GS D ++S
Sbjct: 250 YALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSP 309
Query: 312 TFDNSG-SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN 370
D +R+ +A L+ D S + + S D +I+LWD GK L +L
Sbjct: 310 AEDKKPLARMTGHQALINQVLFSPD------SRIIASASFDKSIKLWDGRTGKYLASLRG 363
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV- 428
H +V +A + S S D+ +K W K +LPGH + ++ + +G V
Sbjct: 364 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA 423
Query: 429 SGADNGTMCFW 439
SG + + W
Sbjct: 424 SGGKDKCLRIW 434
Score = 121 (47.7 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 213 RVISGHLGWVRCVAVEP--GN---EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
RV++GH W+ ++ EP N + A+ S D ++VWD G+ + LTGH SV L
Sbjct: 144 RVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 203
Query: 268 TVSPRHPYLFSCGDDRTVKCW 288
L+S DRT+K W
Sbjct: 204 RWGG-DGLLYSASQDRTIKVW 223
Score = 105 (42.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 55/213 (25%), Positives = 86/213 (40%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDL--ATGKLKLSLT 258
W A L R + GH WV +A+ TG+ A+ I DL + +LK
Sbjct: 223 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASINAQDLQGSLQELKDRAL 281
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
VRG P L S DD T+ W +K P+ M + + + S
Sbjct: 282 RRYNLVRGQ--GPER--LVSGSDDFTLFMWSPAEDKKPL--ARMTGHQALINQVLFSPDS 335
Query: 319 RLITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLA 360
R+I + + DK++KL+ + +A + +S +++GS D T+++WD+
Sbjct: 336 RIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 395
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
A K L H V +V P AS D
Sbjct: 396 AQKLAADLPGHADEVYAVDWSPDGQRVASGGKD 428
Score = 97 (39.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + I LWD + GK + L H K + ++ LH P AS+
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 174 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 233
Query: 450 LQ 451
LQ
Sbjct: 234 LQ 235
Score = 93 (37.8 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 36/148 (24%), Positives = 62/148 (41%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 275 YLFSCGDDRTVKCWDLEYNK--APVQPGSMDSESGI-FSMTFDNSGSRLITTEA-DKTVK 330
L S + + WD K V G +G+ + N R + + + D +V+
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 331 LYKEDDSATEESHPVITG-SHDCTIRLW 357
++ D+ ++TG + T W
Sbjct: 181 VW---DTTAGRCERILTGHTQSVTCLRW 205
Score = 88 (36.0 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 51 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWV 110
Query: 79 ASV 81
S+
Sbjct: 111 LSI 113
Score = 73 (30.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TGK + L GH + GL S + +P + ++ +D + RV
Sbjct: 133 LWDPSTGKQVGRVLAGHSKWITGL-----------SWEPLHANPECRYMASSSKDGSVRV 181
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD LTGHT ++
Sbjct: 182 WDTTAGRCERILTGHTQSV 200
Score = 70 (29.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
SL GH +V + SP YL S D TV+ WDL
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 94
Score = 68 (29.0 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 389 SASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTG 444
S S D + W E K + + GH A+IN + + + +++ A + ++ WD RTG
Sbjct: 297 SGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 355
Score = 54 (24.1 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA 79
GH SV + +L +A +D T +VW TL GH NT+A
Sbjct: 195 GHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 245
Score = 50 (22.7 bits), Expect = 7.7e-16, Sum P(3) = 7.7e-16
Identities = 25/82 (30%), Positives = 35/82 (42%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 76 TGKYLASGSGDT-TVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLW 134
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V L GH+ I +
Sbjct: 135 DPSTGKQVGRVLAGHSKWITGL 156
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 210 (79.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 64/204 (31%), Positives = 94/204 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + T S DK +KVW + K SL H VR SP
Sbjct: 97 VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG 156
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL-- 331
+ SCGDDRTV+ WD ++ + + S F + F++SG+ + ++ AD T+K+
Sbjct: 157 RLIASCGDDRTVRLWDTSSHQC-INIFTDYGGSATF-VDFNSSGTCIASSGADNTIKIWD 214
Query: 332 ---------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
YK ++ HP +I+GS D TI++ DL G+ + TL HK V
Sbjct: 215 IRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVL 274
Query: 377 SVALHPTLYMFASASPDN-IKQWK 399
+V +FAS D+ + WK
Sbjct: 275 TVTFSRDGDLFASGGADSQVLMWK 298
Score = 201 (75.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 63/233 (27%), Positives = 97/233 (41%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + C P N+ ATGS DK + +W+LA GH + G+ +
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P + S D+TV+ W K + S + S+ F G RL+T DK+VK
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSI-KGESTVFKAHTAS-VRSVHFSRDGQRLVTASDDKSVK 127
Query: 331 ---------LYKEDDSA--------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
LY + + + + + D T+RLWD ++ + + T++
Sbjct: 128 VWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
S V + + AS+ DN IK W K IQ+ HNA +N + G
Sbjct: 188 SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG 240
Score = 112 (44.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/129 (25%), Positives = 52/129 (40%)
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
+ + ++T S D ++++W + K L +L H VR P + AS D ++
Sbjct: 111 SRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRL 170
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGVLV--SGADNGTMCFWDWRTG-----YNFQRL 450
W + I + + N+ G + SGADN T+ WD RT Y
Sbjct: 171 WDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADN-TIKIWDIRTNKLIQHYKVHNA 229
Query: 451 QVRCVSGFP 459
V C S P
Sbjct: 230 GVNCFSFHP 238
Score = 111 (44.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H V C + P + +GS+D IK+ DL G+L +L GH G V +T
Sbjct: 219 KLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTF 278
Query: 270 SPRHPYLFSCGD-DRTVKCWDLEYN 293
S R LF+ G D V W ++
Sbjct: 279 S-RDGDLFASGGADSQVLMWKTNFD 302
Score = 95 (38.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T+ RH+ GH ++ +P L T D + +W++ KA + GHT+ I V
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGV 66
Score = 87 (35.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
S++G + + + H +SV ++ L+TA D + +VW V K +Y+L HTN +
Sbjct: 90 SIKGESTV--FKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWV 147
Score = 73 (30.8 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LATG SL + ++ + GH + ++ P+ ++ ++ RD T R+W
Sbjct: 33 LATGSCDKSLM--IWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPS 90
Query: 64 TKANVYTLTGHTNTIASV 81
K HT ++ SV
Sbjct: 91 IKGESTVFKAHTASVRSV 108
Score = 55 (24.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ + Y G S + + + + ++G D+T ++WD+RT
Sbjct: 179 INIFTDYGG---SATFVDFNSSGTCIASSGADNTIKIWDIRT 217
Score = 51 (23.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKA--NVYTLTGHTNT 77
H + V P ++ + G D T R+WD + N++T G + T
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 190 (71.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 63/229 (27%), Positives = 107/229 (46%)
Query: 213 RVISGHLGWVRCVAVEPGN-----EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R ++GH W+ ++ EP + + A+ S D ++VWD G+ + LTGH SV L
Sbjct: 195 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 254
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 255 RWGG-DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 313
Query: 319 RLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + ++K KE S+ + +++GS D T+ LW A K L +T H
Sbjct: 314 TVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 373
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W GK++ +L GH A + I
Sbjct: 374 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 422
Score = 155 (59.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 370 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 429
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K PG D ++++ + G R+ + DK +++++
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLTTDLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 143 (55.4 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ LW A K L +T H+ + V P + ASAS D +IK W
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 444
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCKGHRH---WVLSISWSP 168
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R +T + L E E V + S D
Sbjct: 169 DGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDG 228
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ LT H +SV + +++++ IK W+ +G + L GH
Sbjct: 229 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 288
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 289 GHWVNTMALSTDYALRTGA 307
Score = 133 (51.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 65/251 (25%), Positives = 104/251 (41%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH V C+ G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 242 RILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 300
Query: 273 HPYLFSCGD--DRTVKCWDLE-------------YN----KAPVQ--PGSMDSESGIFSM 311
+ + + TV DL+ YN + P + GS D ++S
Sbjct: 301 YALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSP 360
Query: 312 TFDNSG-SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN 370
D +R+ +A L+ D S V + S D +I+LWD GK L +L
Sbjct: 361 AEDKKPLARMTGHQALINQVLFSPD------SRIVASASFDKSIKLWDGRTGKYLASLRG 414
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV- 428
H +V +A + S S D+ +K W K +LPGH + ++ + +G V
Sbjct: 415 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA 474
Query: 429 SGADNGTMCFW 439
SG + + W
Sbjct: 475 SGGKDKCLRIW 485
Score = 120 (47.3 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRH-- 273
GH WV ++ P + A+G + I +WD +TG ++ +LTGH + GL+ P H
Sbjct: 156 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMN 215
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P Y+ S D +V+ WD + + G S + + + G L + D+T+
Sbjct: 216 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS---VTCLRWGGDGL-LYSASQDRTI 271
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 272 KVWRAHD 278
Score = 109 (43.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 53/211 (25%), Positives = 84/211 (39%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDLATGKLKLSLTGH 260
W A L R + GH WV +A+ TG+ A+ + DL G LK L
Sbjct: 274 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQ-GSLK-ELKER 330
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
S L L S DD T+ W +K P+ M + + + SR+
Sbjct: 331 ASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPL--ARMTGHQALINQVLFSPDSRI 388
Query: 321 ITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLAAG 362
+ + + DK++KL+ + +A + +S +++GS D T+++WD+ A
Sbjct: 389 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 448
Query: 363 KSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
K L H V +V P AS D
Sbjct: 449 KLTTDLPGHADEVYAVDWSPDGQRVASGGKD 479
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + I LWD + G + TLT H K + ++ LH P AS+
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 225 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 284
Query: 450 LQ 451
LQ
Sbjct: 285 LQ 286
Score = 92 (37.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 275 YLFSCGDDRTVKCWD 289
L S + + WD
Sbjct: 172 KLASGCKNGQILLWD 186
Score = 88 (36.0 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 102 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWV 161
Query: 79 ASV 81
S+
Sbjct: 162 LSI 164
Score = 79 (32.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 VWDLATG-KLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TG ++ +LTGH + GL S + ++P + ++ +D + RV
Sbjct: 184 LWDPSTGTQVGRTLTGHSKWITGL-----------SWEPLHMNPECRYVASSSKDGSVRV 232
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD LTGHT ++
Sbjct: 233 WDTTAGRCERILTGHTQSV 251
Score = 70 (29.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
SL GH +V + SP YL S D TV+ WDL
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 145
Score = 67 (28.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 389 SASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTG 444
S S D + W E K + + GH A+IN + + + +V+ A + ++ WD RTG
Sbjct: 348 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 406
Score = 58 (25.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 127 TGKYLASGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLW 185
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V TLTGH+ I +
Sbjct: 186 DPSTGTQVGRTLTGHSKWITGL 207
Score = 55 (24.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA-----SVV 82
GH SV + +L +A +D T +VW TL GH NT+A ++
Sbjct: 246 GHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR 304
Query: 83 TQASEPQVGT 92
T A EP T
Sbjct: 305 TGAFEPAEAT 314
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 190 (71.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 63/229 (27%), Positives = 107/229 (46%)
Query: 213 RVISGHLGWVRCVAVEPGN-----EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R ++GH W+ ++ EP + + A+ S D ++VWD G+ + LTGH SV L
Sbjct: 193 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 253 RWGG-DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 311
Query: 319 RLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + ++K KE S+ + +++GS D T+ LW A K L +T H
Sbjct: 312 TVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W GK++ +L GH A + I
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 155 (59.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K PG D ++++ + G R+ + DK +++++
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLATDLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 143 (55.4 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ LW A K L +T H+ + V P + ASAS D +IK W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCKGHRH---WVLSISWSP 166
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R +T + L E E V + S D
Sbjct: 167 DGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDG 226
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ LT H +SV + +++++ IK W+ +G + L GH
Sbjct: 227 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 287 GHWVNTMALSTDYALRTGA 305
Score = 133 (51.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 65/251 (25%), Positives = 104/251 (41%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH V C+ G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 240 RILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
Query: 273 HPYLFSCGD--DRTVKCWDLE-------------YN----KAPVQ--PGSMDSESGIFSM 311
+ + + TV DL+ YN + P + GS D ++S
Sbjct: 299 YALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSP 358
Query: 312 TFDNSG-SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN 370
D +R+ +A L+ D S V + S D +I+LWD GK L +L
Sbjct: 359 AEDKKPLARMTGHQALINQVLFSPD------SRIVASASFDKSIKLWDGRTGKYLASLRG 412
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV- 428
H +V +A + S S D+ +K W K +LPGH + ++ + +G V
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472
Query: 429 SGADNGTMCFW 439
SG + + W
Sbjct: 473 SGGKDKCLRIW 483
Score = 119 (46.9 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRH-- 273
GH WV ++ P + A+G + + +WD +TG ++ +LTGH + GL+ P H
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P Y+ S D +V+ WD + + G S + + + G L + D+T+
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS---VTCLRWGGDGL-LYSASQDRTI 269
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 270 KVWRAHD 276
Score = 109 (43.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 53/211 (25%), Positives = 84/211 (39%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDLATGKLKLSLTGH 260
W A L R + GH WV +A+ TG+ A+ + DL G LK L
Sbjct: 272 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQ-GSLK-ELKER 328
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
S L L S DD T+ W +K P+ M + + + SR+
Sbjct: 329 ASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPL--ARMTGHQALINQVLFSPDSRI 386
Query: 321 ITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLAAG 362
+ + + DK++KL+ + +A + +S +++GS D T+++WD+ A
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 363 KSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
K L H V +V P AS D
Sbjct: 447 KLATDLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 98 (39.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + + LWD + G + TLT H K + ++ LH P AS+
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 282
Query: 450 LQ 451
LQ
Sbjct: 283 LQ 284
Score = 93 (37.8 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 275 YLFSCGDDRTVKCWD 289
L S + V WD
Sbjct: 170 KLASGCKNGQVLLWD 184
Score = 88 (36.0 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWV 159
Query: 79 ASV 81
S+
Sbjct: 160 LSI 162
Score = 79 (32.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 VWDLATG-KLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TG ++ +LTGH + GL S + ++P + ++ +D + RV
Sbjct: 182 LWDPSTGLQVGRTLTGHSKWITGL-----------SWEPLHMNPECRYVASSSKDGSVRV 230
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD LTGHT ++
Sbjct: 231 WDTTAGRCERILTGHTQSV 249
Score = 70 (29.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
SL GH +V + SP YL S D TV+ WDL
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
Score = 67 (28.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 389 SASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTG 444
S S D + W E K + + GH A+IN + + + +V+ A + ++ WD RTG
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Score = 58 (25.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 125 TGKYLASGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLW 183
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V TLTGH+ I +
Sbjct: 184 DPSTGLQVGRTLTGHSKWITGL 205
Score = 55 (24.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA-----SVV 82
GH SV + +L +A +D T +VW TL GH NT+A ++
Sbjct: 244 GHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR 302
Query: 83 TQASEPQVGT 92
T A EP T
Sbjct: 303 TGAFEPAEAT 312
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 189 (71.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 63/229 (27%), Positives = 107/229 (46%)
Query: 213 RVISGHLGWVRCVAVEP--GN---EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R ++GH W+ ++ EP N + A+ S D ++VWD G+ + +LTGH SV L
Sbjct: 194 RALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCL 253
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 254 RWGG-DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 312
Query: 319 RLITTEADKTVKLYKEDD----SATEESHP--VITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + +++ KE + P +++GS D T+ LW A K L +T H
Sbjct: 313 SVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 372
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W GK++ +L GH A + I
Sbjct: 373 QALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 421
Score = 157 (60.3 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 428
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K PG D ++++ + G R+ + DK +++++
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 485
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/199 (25%), Positives = 90/199 (45%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCQGHRH---WVLSISWSP 167
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R +T + L E A E V + S D
Sbjct: 168 DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDG 227
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ TLT H +SV + +++++ IK W+ +G + L GH
Sbjct: 228 SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 287
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 288 GHWVNTMALSTDYALRTGA 306
Score = 145 (56.1 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ LW A K L +T H+ + V P + ASAS D +IK W
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 443
Score = 123 (48.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 58/245 (23%), Positives = 100/245 (40%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH V C+ G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 241 RTLTGHAQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299
Query: 273 HPYLFSCGD--DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSR-----LITT 323
+ + + +V DL + ++ ++ + + + SGS L +
Sbjct: 300 YALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSP 359
Query: 324 EADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
DK A + +S + + S D +I+LWD GK L +L H +V
Sbjct: 360 AEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVY 419
Query: 377 SVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNG 434
+A + S S D+ +K W K +LPGH + ++ + +G V SG +
Sbjct: 420 QIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDK 479
Query: 435 TMCFW 439
+ W
Sbjct: 480 CLRIW 484
Score = 115 (45.5 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH-- 273
GH WV ++ P + A+G + I +WD +TGK + +LTGH + L+ P H
Sbjct: 155 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 214
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P Y+ S D +V+ WD + G S + + + G L + D+T+
Sbjct: 215 PECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQS---VTCLRWGGDGL-LYSASQDRTI 270
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 271 KVWRAHD 277
Score = 103 (41.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + I LWD + GK + LT H K + +++ LH P AS+
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 224 SKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 283
Query: 450 LQ 451
LQ
Sbjct: 284 LQ 285
Score = 103 (41.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 54/213 (25%), Positives = 86/213 (40%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDL--ATGKLKLSLT 258
W A L R + GH WV +A+ TG+ A+ + DL + +LK
Sbjct: 273 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKERAL 331
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
VRG P L S DD T+ W +K P+ M + + + S
Sbjct: 332 SRYNLVRGQ--GPER--LVSGSDDFTLFLWSPAEDKKPL--ARMTGHQALINQVVFSPDS 385
Query: 319 RLITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLA 360
R+I + + DK++KL+ + +A + +S +++GS D T+++WD+
Sbjct: 386 RVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 445
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
A K L H V +V P AS D
Sbjct: 446 AQKLSTDLPGHADEVYAVDWSPDGQRVASGGKD 478
Score = 92 (37.4 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 275 YLFSCGDDRTVKCWD 289
L S + + WD
Sbjct: 171 KLASGCKNGQILLWD 185
Score = 88 (36.0 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 101 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWV 160
Query: 79 ASV 81
S+
Sbjct: 161 LSI 163
Score = 76 (31.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TGK + +LTGH + +T + S + +P + ++ +D + RV
Sbjct: 183 LWDPSTGKQVGRALTGHS---KWITAL--------SWEPLHANPECRYVASSSKDGSVRV 231
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD TLTGH ++
Sbjct: 232 WDTTAGRCERTLTGHAQSV 250
Score = 74 (31.1 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 28/104 (26%), Positives = 45/104 (43%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN 315
SL GH +V + SP YL S D TV+ WDL + P + S+++
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS-TETP-HFTCQGHRHWVLSISWSP 167
Query: 316 SGSRLITTEADKTVKLYKEDDSATEESHPVITG-SHDCTIRLWD 358
G +L + + + L+ D S ++ +TG S T W+
Sbjct: 168 DGKKLASGCKNGQILLW--DPSTGKQVGRALTGHSKWITALSWE 209
Score = 67 (28.6 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 389 SASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
S S D + W E K + + GH A+IN + + + V+ S + + ++ WD RTG
Sbjct: 347 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTG 405
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA 79
GH SV + +L +A +D T +VW TL GH NT+A
Sbjct: 245 GHAQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 295
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 26/82 (31%), Positives = 37/82 (45%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 126 TGKYLASGSGDT-TVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLW 184
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V LTGH+ I ++
Sbjct: 185 DPSTGKQVGRALTGHSKWITAL 206
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 180 (68.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 62/229 (27%), Positives = 106/229 (46%)
Query: 213 RVISGHLGWVRCVAVEP--GN---EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R ++GH W+ ++ EP N + A+ S D +++WD G+ + LTGH SV L
Sbjct: 193 RTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL 252
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 253 RWGG-DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 311
Query: 319 RLITTEADKTVKLYKEDD----SATEESHP--VITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + +++ KE + P +++GS D T+ LW A K L +T H
Sbjct: 312 SVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGH 371
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W GK++ +L GH A + I
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 156 (60.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K + PG D ++++ + G R+ + DK +++++
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAMDLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 142 (55.0 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ LW A K L +T H+ + V P + ASAS D +IK W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCKGHRH---WVLSISWSP 166
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R + + L E A E V + S D
Sbjct: 167 DGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDG 226
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ LT H +SV + +++++ IK W+ +G + L GH
Sbjct: 227 SVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 287 GHWVNTMALSTDYALRTGA 305
Score = 128 (50.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 61/246 (24%), Positives = 102/246 (41%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH V C+ G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 240 RILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
Query: 273 HPYLFSCGD--DRTVKCWDLE-------------YNKAPVQ-PGSMDSESGIFSM-TFDN 315
+ + + +V DL+ YN Q P + S S F++ +
Sbjct: 299 YALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSP 358
Query: 316 SGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
+ + T L + + +S V + S D +I+LWD GK L +L H +V
Sbjct: 359 AEDKKPLTRMTGHQALINQV-LFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAV 417
Query: 376 RSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADN 433
+A + S S D+ +K W K +LPGH + ++ + +G V SG +
Sbjct: 418 YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKD 477
Query: 434 GTMCFW 439
+ W
Sbjct: 478 KCLRIW 483
Score = 118 (46.6 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH-- 273
GH WV ++ P A+G + I +WD +TGK + +L GH + GL+ P H
Sbjct: 154 GHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P Y+ S D +V+ WD + + G S + + + G L + D+T+
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQS---VTCLRWGGDGL-LYSASQDRTI 269
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 270 KVWRAHD 276
Score = 102 (41.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 53/213 (24%), Positives = 86/213 (40%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDL--ATGKLKLSLT 258
W A L R + GH WV +A+ TG+ A+ + DL + +LK
Sbjct: 272 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNPQDLQGSLQELKERAL 330
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
VRG P L S DD T+ W +K P+ M + + + S
Sbjct: 331 SRYNLVRGQ--GPER--LVSGSDDFTLFLWSPAEDKKPLT--RMTGHQALINQVLFSPDS 384
Query: 319 RLITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLA 360
R++ + + DK++KL+ + +A + +S +++GS D T+++WD+
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
A K L H V +V P AS D
Sbjct: 445 AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 101 (40.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + I LWD + GK + TL H K + ++ LH P AS+
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 223 SKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 282
Query: 450 LQ 451
LQ
Sbjct: 283 LQ 284
Score = 91 (37.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 275 YLFSCGDDRTVKCWD 289
L S + + WD
Sbjct: 170 KLASGCKNGQILLWD 184
Score = 88 (36.0 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWV 159
Query: 79 ASV 81
S+
Sbjct: 160 LSI 162
Score = 74 (31.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TGK + +L GH + GL S + +P + ++ +D + R+
Sbjct: 182 LWDPSTGKQVGRTLAGHSKWITGL-----------SWEPLHANPECRYVASSSKDGSVRI 230
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD LTGHT ++
Sbjct: 231 WDTTAGRCERILTGHTQSV 249
Score = 70 (29.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
SL GH +V + SP YL S D TV+ WDL
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
Score = 67 (28.6 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 389 SASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTG 444
S S D + W E K + + GH A+IN + + + +V+ A + ++ WD RTG
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Score = 54 (24.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA 79
GH SV + +L +A +D T +VW TL GH NT+A
Sbjct: 244 GHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 294
Score = 51 (23.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/82 (31%), Positives = 36/82 (43%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 125 TGKYLASGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLW 183
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V TL GH+ I +
Sbjct: 184 DPSTGKQVGRTLAGHSKWITGL 205
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 230 (86.0 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 70/251 (27%), Positives = 109/251 (43%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L + GH WV+ V + A+ S D +K+WD ATG L+ L GH SVR + S
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS 356
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+ S +DRTV+ W E ++ D E + +++F + RL + VK
Sbjct: 357 HDSRLIASGSNDRTVRIW--ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 331 LYK------------EDD-----SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ DD S + +S + + S D T+++W A G TL H
Sbjct: 415 IWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND 474
Query: 374 SVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD 432
VRSV + ASAS D +K W NL H+ + S+ +++ L++ A
Sbjct: 475 WVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASAS 534
Query: 433 NGTMCFWDWRT 443
+ M W T
Sbjct: 535 DD-MTVKIWDT 544
Score = 225 (84.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 68/251 (27%), Positives = 112/251 (44%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R++ GH VR V + A+GS D+ +++W+ TG L+ + H SV ++ +
Sbjct: 339 LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFA 398
Query: 271 PRHPYLFSCGDDRTVKCWD---------LEYNKAPVQPGSMDSESGIFSMTFDNSGSRL- 320
L S D VK WD LE + V S +S + + D+ ++
Sbjct: 399 HDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW 458
Query: 321 --ITTEADKTVKLYKEDDSATEESHP---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
T +T++ + + + SH + + S D T+++WD A L +H V
Sbjct: 459 HAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWV 518
Query: 376 RSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADN 433
RSV + ASAS D +K W G L GH+ +NS+ + + +L S +D+
Sbjct: 519 RSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDD 578
Query: 434 GTMCFWDWRTG 444
GT+ W TG
Sbjct: 579 GTVKIWYAATG 589
Score = 213 (80.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 71/247 (28%), Positives = 109/247 (44%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH V V+ + A+ S D +K+WD AT L+ +L GH V+ + S L
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 277 FSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEA-DKTVKLYKE 334
S DD TVK WD + G DS + S+ F + SRLI + + D+TV++++
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDS---VRSVVFSHD-SRLIASGSNDRTVRIWET 376
Query: 335 DDSA---TEESHP----VITGSHDC----------TIRLWDLAAGKSLCTLTNHKKSVRS 377
T E H ++ +HD +++WD G L H V S
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 378 VALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTM 436
V+ P + ASAS D +K W G + L GHN + S+ +++ L++ A + M
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDD-M 495
Query: 437 CFWDWRT 443
W T
Sbjct: 496 TVKIWDT 502
Score = 194 (73.4 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 59/206 (28%), Positives = 90/206 (43%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L V+ GH V V+ P + A+ S D+ +K+W ATG L+ +L GH VR + S
Sbjct: 423 LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS 482
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+ S DD TVK WD P+Q ++ + S+ F + L + D TVK
Sbjct: 483 HDSRLIASASDDMTVKIWDTA--TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVK 540
Query: 331 LYK------------EDD-----SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ DD S + +S + + S D T+++W A G T +
Sbjct: 541 IWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGR 600
Query: 374 SVRSVALHPTLYMFASASPDN-IKQW 398
S+A T + ASA D +K W
Sbjct: 601 VAISLAFSHTSNLLASAMDDGTVKIW 626
Score = 162 (62.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
WHA L R + GH WVR V + A+ S D +K+WD AT L+ +L H
Sbjct: 458 WHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNW 517
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
VR + S L S DD TVK WD D + S++F + SRL+ +
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR--VNSVSF-SPDSRLLAS 574
Query: 324 EADK-TVKLY 332
+D TVK++
Sbjct: 575 ASDDGTVKIW 584
Score = 138 (53.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
+ +S + + S D T+++WD A G TL H V SV+ P + ASAS D +K
Sbjct: 524 SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKI 583
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNN-EGVLVSGADNGTMCFWD 440
W G G + S+ ++ +L S D+GT+ WD
Sbjct: 584 WYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 122 (48.0 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 38/119 (31%), Positives = 51/119 (42%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A L + GH V V+ P + A+ S D +K+W ATG ++ + G
Sbjct: 542 WDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRV 601
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
L S L S DD TVK WD+E + D + I + FD S S LIT
Sbjct: 602 AISLAFSHTSNLLASAMDDGTVKIWDMEIYSLR---HTFDLDHEIQRIQFDKSMSSLIT 657
Score = 91 (37.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
GH VN++S P +L +A D T ++W T + TL GH + + SVV
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Score = 85 (35.0 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
+ GH +V ++S +L +A D T ++WD T TL GH + SVV
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVV 312
Score = 73 (30.8 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
GH V ++ +L +A D T ++WD T L GH +++ SVV
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVV 354
Score = 73 (30.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 25/82 (30%), Positives = 36/82 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAG-RDSTARV 59
+WD ATG L+ L GH SVR + H S LI +G D T R+
Sbjct: 331 IWDTATGTLQRMLKGHNDSVRSVVF-----SHDSR------------LIASGSNDRTVRI 373
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
W+ T +T H +++ +V
Sbjct: 374 WETTTGLLRHTFEDHEDSVMAV 395
Score = 71 (30.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/82 (29%), Positives = 35/82 (42%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+W ATG L+ +L GH VR +V+ + L + +A D T ++W
Sbjct: 457 IWHAATGSLQRTLEGHNDWVR--SVVFSHDSRL--------------IASASDDMTVKIW 500
Query: 61 DVRTKANVYTLTGHTNTIASVV 82
D T L H N + SVV
Sbjct: 501 DTATVPLQNNLESHDNWVRSVV 522
Score = 69 (29.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 25 VIRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++RH + H SV +S L +A ++WD RT + L GH + + SV
Sbjct: 380 LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSV 437
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 181 (68.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 62/229 (27%), Positives = 105/229 (45%)
Query: 213 RVISGHLGWVRCVAVEP--GN---EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R ++GH W+ ++ EP N + A+ S D ++VWD G+ + LTGH SV L
Sbjct: 193 RALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 253 RWGG-DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 311
Query: 319 RLITTEADKTVKLYKEDDSATEES------HPVITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + +++ KE + +++GS D T+ LW A K L +T H
Sbjct: 312 SVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W GK++ +L GH A + I
Sbjct: 372 QALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 156 (60.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P + A+ S DK IK+WD TGK SL GHV +V + S
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD++ K PG D ++++ + G R+ + DK +++++
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAADLPGHADE---VYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 144 (55.7 bits), Expect = 6.5e-19, Sum P(3) = 6.5e-19
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 345 VITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPE 402
+++GS D T+ LW A K L +T H+ + V P + ASAS D +IK W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 403 GKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
GK++ +L GH A + I + + +LVSG+ + T+ WD
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
G ++ +I V TGK S +G +VR +S P+ F+C R W L + +P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPH-FTCQGHRH---WVLSISWSP 166
Query: 297 ----VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC 352
+ G + + ++ + R + + L E A E V + S D
Sbjct: 167 DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDG 226
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGH 412
++R+WD AG+ LT H +SV + +++++ IK W+ +G + L GH
Sbjct: 227 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 413 NAIINSICVNNEGVLVSGA 431
+N++ ++ + L +GA
Sbjct: 287 GHWVNTMALSTDYALRTGA 305
Score = 113 (44.8 bits), Expect = 6.5e-19, Sum P(3) = 6.5e-19
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH-- 273
GH WV ++ P + A+G + I +WD +TGK + +L GH + L+ P H
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHAN 213
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P Y+ S D +V+ WD + + G S + + + G L + D+T+
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS---VTCLRWGGDGL-LYSASQDRTI 269
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 270 KVWRAHD 276
Score = 111 (44.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWK 399
+S + + S D +I+LWD GK L +L H +V +A + S S D+ +K W
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFW 439
K +LPGH + ++ + +G V SG + + W
Sbjct: 443 VKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 104 (41.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 53/213 (24%), Positives = 86/213 (40%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDL--ATGKLKLSLT 258
W A L R + GH WV +A+ TG+ A+ + DL + +LK
Sbjct: 272 WRAHDGVLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKERAL 330
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
VRG + L S DD T+ W +K P+ M + + + S
Sbjct: 331 SRYNLVRGRGLER----LVSGSDDFTLFLWSPAEDKKPL--ARMTGHQALINQVLFSPDS 384
Query: 319 RLITTEA-DKTVKLY-----------KEDDSA------TEESHPVITGSHDCTIRLWDLA 360
R+I + + DK++KL+ + +A + +S +++GS D T+++WD+
Sbjct: 385 RIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
A K L H V +V P AS D
Sbjct: 445 AQKLAADLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 97 (39.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASA 390
S + + + +G + I LWD + GK + L H K + +++ LH P AS+
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 391 SPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQR 449
S D +++ W G+ + L GH + + +G+L S + + T+ W G +
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 282
Query: 450 LQ 451
LQ
Sbjct: 283 LQ 284
Score = 92 (37.4 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + GH V ++ SP
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 275 YLFSCGDDRTVKCWD 289
L S + + WD
Sbjct: 170 KLASGCKNGQILLWD 184
Score = 88 (36.0 bits), Expect = 6.5e-19, Sum P(3) = 6.5e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
VR +T GH +V +++ PT L + D+T R WD+ T+ +T GH + +
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWV 159
Query: 79 ASV 81
S+
Sbjct: 160 LSI 162
Score = 70 (29.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
SL GH +V + SP YL S D TV+ WDL
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
Score = 70 (29.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD +TGK + +L GH + +T + S + +P + ++ +D + RV
Sbjct: 182 LWDPSTGKQVGRALAGHS---KWITAL--------SWEPLHANPECRYVASSSKDGSVRV 230
Query: 60 WDVRTKANVYTLTGHTNTI 78
WD LTGHT ++
Sbjct: 231 WDTTAGRCERILTGHTQSV 249
Score = 67 (28.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 384 LYMFASASPD-NIKQWKCPEGKF-IQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWD 440
L S S D + W E K + + GH A+IN + + + +++ A + ++ WD
Sbjct: 341 LERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Query: 441 WRTG 444
RTG
Sbjct: 401 GRTG 404
Score = 54 (24.1 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH---TNTIA 79
GH SV + +L +A +D T +VW TL GH NT+A
Sbjct: 244 GHTQSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 294
Score = 49 (22.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 25/82 (30%), Positives = 36/82 (43%)
Query: 6 TGKLKLSLTGHVGSVR--GL-TVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
TGK S +G +VR L T H+ GH V +IS P L + ++ +W
Sbjct: 125 TGKYLASGSGDT-TVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLW 183
Query: 61 DVRTKANV-YTLTGHTNTIASV 81
D T V L GH+ I ++
Sbjct: 184 DPSTGKQVGRALAGHSKWITAL 205
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 233 (87.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 66/239 (27%), Positives = 110/239 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+I H G +R ++ + + S DK +K+W L K S GH VR +SP
Sbjct: 126 IIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDM 185
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ S DD+TV WDL + K + ++D I + NS S + T + L+
Sbjct: 186 RLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQI---NSYSDHMDTVSQV---LFH 239
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
D + +I+ S D I++ D+ + K + H V S+++HPT Y ASA D
Sbjct: 240 PDGTC------LISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSD 293
Query: 394 N-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ IK W +G+ I L ++ I ++ N G + + +C W+T ++ Q +Q
Sbjct: 294 SKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMV-WKTNFD-QNIQ 350
Score = 193 (73.0 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 71/249 (28%), Positives = 111/249 (44%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT-GH 260
KPQ P+K GH G V CV P E A+ D+ I++W T + K S+ H
Sbjct: 77 KPQ-QRPFKFV----GHKGAVYCVKYSPDGETIASCGQDRQIRLWQ-NTVQSKCSIIKAH 130
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMD-SESGIFSMTFDNSGS 318
G++R ++ S YL S DD+T+K W L+ K G + SG+ S
Sbjct: 131 CGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDM----- 185
Query: 319 RLITTEAD-KTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
RL+ + +D KTV L+ + + + D +++ + + ++H +V
Sbjct: 186 RLVASGSDDKTVMLWDLNFQKIVSKYSTL----DDNVKI------SQINSYSDHMDTVSQ 235
Query: 378 VALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGT 435
V HP S+S D+ IK K IQ+ H+A +NSI ++ G L S +
Sbjct: 236 VLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSK 295
Query: 436 MCFWDWRTG 444
+ WD R G
Sbjct: 296 IKIWDLRQG 304
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 51/172 (29%), Positives = 75/172 (43%)
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
H P L R GH + C +P A+ S D I+ VW+ + GH G+V
Sbjct: 35 HDP-ALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVY 93
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTE 324
+ SP + SCG DR ++ W N + + + G I SM+F G L+++
Sbjct: 94 CVKYSPDGETIASCGQDRQIRLWQ---NTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSS 150
Query: 325 ADKTVKLYKEDDS---ATEESH----------P----VITGSHDCTIRLWDL 359
DKT+KL++ D + H P V +GS D T+ LWDL
Sbjct: 151 DDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL 202
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
+ +R +I+HY+ H + VN+IS+HPT L +AG DS ++WD+R +YTL +
Sbjct: 256 ITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDK 315
Query: 77 TIASV 81
I +V
Sbjct: 316 DITTV 320
Score = 62 (26.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R + GH + P + + + +DS VW+ + + + GH + V
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCV 95
Score = 58 (25.5 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V + P + + + G+D R+W ++ + H I S+
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSM 137
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 202 (76.2 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 62/230 (26%), Positives = 99/230 (43%)
Query: 215 ISGHLGWVRCVAVE-PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ GH V +A P + ATGS DK K+W TGK + GH + L +P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS 189
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY- 332
+ + D T K WD+E + +E I S+ F+ +G RL+T D T L+
Sbjct: 190 TLVATGSMDTTAKLWDVESGEEVSTLAGHFAE--IISLCFNTTGDRLVTGSFDHTAILWD 247
Query: 333 -------------KEDDSATE---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
+ + S + + + T S D + ++WD G+ L TL H V
Sbjct: 248 VPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVL 307
Query: 377 SVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEG 425
V + T + A+AS D + + + + L GH I+ +C N +G
Sbjct: 308 DVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQG 357
Score = 169 (64.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 65/253 (25%), Positives = 96/253 (37%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K + GH + C+A P + ATGS D K+WD+ +G+ +L GH
Sbjct: 162 WSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAE 221
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYN-KAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+ L + L + D T WD+ K V G I + F+ S + T
Sbjct: 222 IISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE---ISCVQFNWDCSLIAT 278
Query: 323 TEADKTVKLYKEDDS---ATEESHP--------------VITGSHDCTIRLWDLAAGKSL 365
DK+ K++ + AT H + T S D T R++ + L
Sbjct: 279 ASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCL 338
Query: 366 CTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNE 424
C L HK + V + +AS D + W G +Q L GH+ I S N E
Sbjct: 339 CQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYE 398
Query: 425 GVLVSGADNGTMC 437
G + C
Sbjct: 399 GDTIITGSKDNTC 411
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 52/174 (29%), Positives = 74/174 (42%)
Query: 275 YLFSCGDDRTVKCWDLEYNKAP--VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
YLF + ++ +NK+ GS D I+ SG L T E + V +Y
Sbjct: 83 YLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTA---SGEELHTLEGHRNV-VY 138
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASP 392
+ V TGS D T +LW GK T H + +A +P + A+ S
Sbjct: 139 AIAFN-NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSM 197
Query: 393 DNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
D K W G+ + L GH A I S+C N G LV+G+ + T WD +G
Sbjct: 198 DTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG 251
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L+R + H+ + VA F TGS D+ K+WD A+G+ +L GH V + +
Sbjct: 84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 271 PRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ + G D+T K W E K +E I + F+ + + T D T
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAE--IVCLAFNPQSTLVATGSMDTTA 201
Query: 330 KLY---KEDDSATEESH--------------PVITGSHDCTIRLWDLAAGKSLCTLTNHK 372
KL+ ++ +T H ++TGS D T LWD+ +G+ + L+ H+
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHR 261
Query: 373 KSVRSVALHPTLYMFASASPD 393
+ V + + A+AS D
Sbjct: 262 GEISCVQFNWDCSLIATASLD 282
Score = 112 (44.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 47/170 (27%), Positives = 72/170 (42%)
Query: 205 WHAP-WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W P + V+SGH G + CV AT S DK KVWD G+ +L GH
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 264 VRGLTVSPRHPYLFSC---GDDR-----TVKCW-DLEYNKAPVQPGSMDSE-SGIFSMTF 313
V + + + + G R T +C LE +K + +++ S + + +
Sbjct: 306 VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASV 365
Query: 314 DNSGSRL--ITTEADKTVKLYKEDD----SATEESHPVITGSHDCTIRLW 357
D + SR+ + T A V D+ + E +ITGS D T R+W
Sbjct: 366 DKT-SRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 94 (38.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ GH + + ++ +P ++ T D+TA++WDV + V TL GH I S+
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISL 225
Score = 93 (37.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ATG + T + V + GH + + ++ + T D L+T D TA +WDV
Sbjct: 192 VATGSM--DTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP 249
Query: 64 TKANVYTLTGHTNTIASV 81
+ V+ L+GH I+ V
Sbjct: 250 SGRKVHVLSGHRGEISCV 267
Score = 83 (34.3 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 21 RGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
R + R H+ + ++ + + IT D T ++WD + ++TL GH N + +
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYA 139
Query: 81 V 81
+
Sbjct: 140 I 140
Score = 79 (32.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 31 GHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
GH + V I+ + P D + T D T ++W T YT GHT A +V A PQ
Sbjct: 132 GHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHT---AEIVCLAFNPQ 188
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 230 (86.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 73/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 286 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 343
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 344 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 396
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 397 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 456
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G N +++ C+ N+
Sbjct: 457 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 515
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 516 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 546
Score = 194 (73.4 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 254 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 310
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 311 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 370
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 371 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 430
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 431 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 488
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 489 KTGQCLQTLQ 498
Score = 57 (25.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 306
Score = 54 (24.1 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 285 VWSAVTGKCLRTLVGHTGGV 304
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 230 (86.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 73/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 326 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 383
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 384 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 436
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 437 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 496
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G N +++ C+ N+
Sbjct: 497 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 555
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 556 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 586
Score = 194 (73.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 294 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 350
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 351 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 410
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 411 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 470
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 471 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 528
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 529 KTGQCLQTLQ 538
Score = 57 (25.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 346
Score = 54 (24.1 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 325 VWSAVTGKCLRTLVGHTGGV 344
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 150 (57.9 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 209 WKLYR------VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W++Y +SGH G V P T S DK + WD+ATG+ + GH
Sbjct: 82 WQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGN 141
Query: 263 SVRGLTVSPRHPYLFSCG-DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
V + S R L G DDRT+K WD A +++S + ++ F ++G ++I
Sbjct: 142 FVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAA---HTLESPFQVTAVCFGDTGEQVI 198
Query: 322 TTEADKTVKLY---KE---------DDSATEES-HP----VITGSHDCTIRLWDL 359
+ D VK++ K+ D+ T S P ++T + D T+R+WD+
Sbjct: 199 SGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 53/254 (20%), Positives = 107/254 (42%)
Query: 159 KRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGH 218
KR ++ I QE S +N L+ T + +++ + + P + GH
Sbjct: 4 KRPNNSVILAQEAKRS-KNDLMAYTNRDKALLESGVRRTSNLQAPIMQ--------LEGH 54
Query: 219 LGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLF 277
G + P E + D+ I +W + + ++++GH G+V +P ++F
Sbjct: 55 EGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIF 114
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD-KTVKLY---K 333
+C D+T+ WD+ + Q + + S+ G +L+ + +D +T+K++ K
Sbjct: 115 TCSTDKTLAFWDIATGQR--QRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 334 EDDSATEES-------------HPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
+ + T ES VI+G D +++WD+ L L H ++ ++L
Sbjct: 173 KHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSL 232
Query: 381 HPTLYMFASASPDN 394
P + + DN
Sbjct: 233 SPEGDFILTNAMDN 246
Score = 129 (50.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 206 HAPW-KLYRVISGHL-----GWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
+AP + +V GH +RC A PG++ +GSAD+ + +WD+ T ++ L G
Sbjct: 256 YAPGERCVKVFQGHQHNFEKNLLRC-AWSPGSDKITSGSADRHVYIWDVNTRRILYKLPG 314
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
H GSV + SP+ P + S D+T+ +++
Sbjct: 315 HNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 100 (40.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V V E +G D +K+WD+ + L GH ++ G+++SP ++ +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 282 DRTVKCWDLEYNKAPVQPG 300
D T++ WD+ P PG
Sbjct: 245 DNTLRVWDVR----PYAPG 259
Score = 98 (39.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+GS D TI++WD + TL + + V +V T S DN +K W +
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 406 IQNLPGHNAIINSICVNNEG--VLVSGADNGTMCFWDWR 442
+ +L GH+ I + ++ EG +L + DN T+ WD R
Sbjct: 217 LHHLRGHSDTITGMSLSPEGDFILTNAMDN-TLRVWDVR 254
Score = 94 (38.1 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 337 SATEESHPVITGSHDCTIRLWDL---AAGKSLCTLT-----NHKKSVRSVALHPTLYMFA 388
S + E ++T + D T+R+WD+ A G+ + N +K++ A P
Sbjct: 231 SLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKIT 290
Query: 389 SASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTM 436
S S D ++ W + + LPGHN +N++ + E +++SG+ + T+
Sbjct: 291 SGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 80 (33.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
V + T + +I+ G D+ ++WD+R +A ++ L GH++TI +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGM 230
Score = 77 (32.2 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKA-NVYTLTGHTNTI 78
I GH + T HP ++L+++G D +W V NV ++GH+ +
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAV 101
Score = 66 (28.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTL 71
R + GH + VN++ L+ +G D T ++WD R K +TL
Sbjct: 134 RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL 179
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 224 (83.9 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 68/252 (26%), Positives = 110/252 (43%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V C+ P E+ ATGS D+++ +W+LA G++ S GH V + V
Sbjct: 1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSL 1309
Query: 275 YLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTF------DNSGSRLITTEADK 327
+ S D + W N G S S +M F DN+ T+ D+
Sbjct: 1310 RVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDE 1369
Query: 328 TVKLYKEDD----SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
+ D+ + +S +I+GS D ++++W GK L H +V VA+ T
Sbjct: 1370 KYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVT 1429
Query: 384 -LYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
S S D N+ W G+ + L GH + + V+ +G VSG+D+ T+ W+
Sbjct: 1430 NKTQVLSGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWE 1489
Query: 441 WRTGYNFQRLQV 452
+ G LQ+
Sbjct: 1490 TKRGLALTSLQM 1501
Score = 137 (53.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 60/251 (23%), Positives = 111/251 (44%)
Query: 144 EVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKP 203
+VQ+ + + + + H ++C + P ++++L+ T + + ++
Sbjct: 920 DVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLV------------ 967
Query: 204 QWHAPWKLYR--VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
WH + R + + H + VA N + S D I + DLA+GKL+ +T H
Sbjct: 968 -WHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLASGKLRHRITHHR 1026
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLE----YNKAPVQPGSM--D-SESGIFSMTF- 313
G V G+ V+ L S G DRT+ WDL+ N + + D S + +F +
Sbjct: 1027 GPVSGIVVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSAVLRIDISWNSVFLLALC 1086
Query: 314 -DNS-GSRLITTEAD-KTVKLYKE---DDSATEESHPVITGSHDCTIRLWDLAAGKSLCT 367
DN+ R + T + T+K +K S ++S + G D ++D+ AGK + +
Sbjct: 1087 EDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDMHAGKLVRS 1146
Query: 368 LTNHKKSVRSV 378
L + V +V
Sbjct: 1147 LPPNPGPVTAV 1157
Score = 135 (52.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 183 TASNTQIIQQAKAKALPMPKPQWHAPW-KLYRVISGHLGWVRCVAVEPGNEW-FATGSAD 240
+A + II ++ +L + W A KL +V+ GH V CVAV N+ +GS D
Sbjct: 1385 SADSVHIISGSRDMSLKV----WQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKD 1440
Query: 241 KIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
+ +WDL TG+ +L GH+G V G+ VS S DD+T+ W+
Sbjct: 1441 MNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWE 1489
Score = 117 (46.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 50/247 (20%), Positives = 91/247 (36%)
Query: 207 APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
A K + GH +R +++ ++ G D ++D+ GKL SL + G V
Sbjct: 1097 ATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDMHAGKLVRSLPPNPGPVTA 1156
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
+ +L + G ++ + + + V P S S+ R +T
Sbjct: 1157 VHAMDNDDFLVTVGGNK-ITFYSFRNEELYVNPYSRHPRRKR-SLKRHAQAQRSPSTTLP 1214
Query: 327 KTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
+ + D S + + +G H + L + + CTL H V + P
Sbjct: 1215 P-ITCF--DLSRDSQQMAIASGRH---VHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEF 1268
Query: 387 FASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCF-WDWRTG 444
A+ S D + W G+ + GH A + + V + + V D +M W +G
Sbjct: 1269 LATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSG 1328
Query: 445 YNFQRLQ 451
Q +Q
Sbjct: 1329 NLLQTIQ 1335
Score = 101 (40.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFASASPD-NIKQW 398
+S ++TGS D T+ +W + + + N H + VA + S+S D +I
Sbjct: 952 DSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAIT 1011
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWD 440
GK + H ++ I V VL+SG + T+C WD
Sbjct: 1012 DLASGKLRHRITHHRGPVSGIVVAGACDVLISGGLDRTICVWD 1054
Score = 76 (31.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 32/121 (26%), Positives = 49/121 (40%)
Query: 176 ENQLVPTTASNTQIIQQAKAKALPMPKPQW-HAPWKLY---RVISGHLGWVRCVAVEPGN 231
+N L+ T + A L +P W AP +SG G +R V + P
Sbjct: 851 DNSLLSMTVRSATAWCDGYAVPLLVPLTGWLPAPLPSQIRTMTVSG-TGCIRAVWLAPSK 909
Query: 232 EWF--ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP--YLFSCGDDRTVKC 287
+ AT S D ++ W + + L GH +V L V+P+ L + +D TV
Sbjct: 910 QHLILATSSGD--VQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLV 967
Query: 288 W 288
W
Sbjct: 968 W 968
Score = 75 (31.5 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRH-----YHGHLSSVNTISLHPTID--VLITAGR 53
VW LA K L L G V+ ++ + + GH ++V + + P D +L+T
Sbjct: 903 VW-LAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSE 961
Query: 54 DSTARVWDVRTKAN-VYTLTGHTNTIASVVTQAS 86
D+T VW V + + HT I V A+
Sbjct: 962 DATVLVWHVGLRERRAHIKNAHTAPITGVAAGAN 995
Score = 68 (29.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 23/62 (37%), Positives = 30/62 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+ DLA+GKL+ +T H G V G+ V G DVLI+ G D T VW
Sbjct: 1010 ITDLASGKLRHRITHHRGPVSGIVVA----G------------ACDVLISGGLDRTICVW 1053
Query: 61 DV 62
D+
Sbjct: 1054 DL 1055
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
GH + V+ + P + L T D +W++ + GHT + VV
Sbjct: 1252 GHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVV 1303
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVI 26
+W+LA G++ S GH V + V+
Sbjct: 1280 IWNLALGEICNSFKGHTAPVVKVVVL 1305
Score = 46 (21.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 4 LATGKLKLSLTGHVGSVRGLTV 25
LATGK +L GH +R +++
Sbjct: 1096 LATGKELHTLKGHKSKIRSISI 1117
Score = 46 (21.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 20 VRGLTVIRHYH---GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
VR L + H GH S + +IS+ + D+ A ++D+ V +L +
Sbjct: 1093 VRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDMHAGKLVRSLPPNPG 1152
Query: 77 TIASV 81
+ +V
Sbjct: 1153 PVTAV 1157
Score = 46 (21.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTV 95
+ + L P+ LI A + W + + + + GHT A+V PQ ++ +
Sbjct: 900 IRAVWLAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHT---AAVTCLLVAPQSDSELL 956
Query: 96 LLESCERIMFV 106
L S + + V
Sbjct: 957 LTGSEDATVLV 967
Score = 46 (21.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 15/80 (18%), Positives = 36/80 (45%)
Query: 4 LATGKLKLS-LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
L TG + L HVG I++ H + + ++ ++I++ D++ + D+
Sbjct: 956 LLTGSEDATVLVWHVGLRERRAHIKN--AHTAPITGVAAGANNTLIISSSEDASIAITDL 1013
Query: 63 RTKANVYTLTGHTNTIASVV 82
+ + +T H ++ +V
Sbjct: 1014 ASGKLRHRITHHRGPVSGIV 1033
Score = 44 (20.5 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 6 TGKLKLSLTGHVGS----VRGL--TVIRHYHGHLSSVNTISLHPTIDVLI 49
T KL+L + H+ + ++G TV +H H + + + H D L+
Sbjct: 304 TDKLRLLIEAHITNDPDVIKGRKKTVQEIFHEHSTHLRILREHTDSDALV 353
Score = 44 (20.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSV-NTISLHPTIDVLITAGRDSTARVWDV 62
LATG + H+ ++ + + GH + V + L ++ V+ T RDS VW
Sbjct: 1269 LATGSEDRLV--HIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVIST-DRDSMLLVWMA 1325
Query: 63 RTKANVYTLTG 73
+ + T+ G
Sbjct: 1326 HSGNLLQTIQG 1336
Score = 42 (19.8 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
L+ D+ V + T ++TL GH + I S+
Sbjct: 1082 LLALCEDNALYVRTLATGKELHTLKGHKSKIRSI 1115
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 230 (86.0 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 73/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 406 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 463
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 464 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 516
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 517 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 576
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G N +++ C+ N+
Sbjct: 577 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 635
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 636 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 666
Score = 194 (73.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 374 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 430
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 431 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 490
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 491 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 550
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 551 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 608
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 609 KTGQCLQTLQ 618
Score = 57 (25.1 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 426
Score = 54 (24.1 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 405 VWSAVTGKCLRTLVGHTGGV 424
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 230 (86.0 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 73/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 411 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 468
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 469 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 521
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 522 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 581
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G N +++ C+ N+
Sbjct: 582 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 640
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 641 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 671
Score = 194 (73.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 379 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 435
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 436 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 495
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 496 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 555
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 556 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 613
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 614 KTGQCLQTLQ 623
Score = 57 (25.1 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 431
Score = 54 (24.1 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 410 VWSAVTGKCLRTLVGHTGGV 429
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 190 (71.9 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 64/205 (31%), Positives = 89/205 (43%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + T S DK IKVW + K SL+ H+ VR SP
Sbjct: 99 VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ + S G + + F SG+ + DKTVK+
Sbjct: 159 RLIASASDDKTVKLWD-KTSRECIH--SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Query: 332 ----------YKEDDSATEES--HP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP +IT S+D T+++ DL G+ L TL H+
Sbjct: 216 DVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPA 275
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
VA T FAS D + WK
Sbjct: 276 TCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 57/241 (23%), Positives = 98/241 (40%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + V + A+GS D +K+W + L GH +V + S
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P + S D+TV W + K + + + S+ F + G L+T DKT+K
Sbjct: 72 PSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTAT-VRSVHFSSDGQSLVTASDDKTIK 129
Query: 331 LY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ ++ + H P + + S D T++LWD + + + + H
Sbjct: 130 VWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGG 189
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD 432
V HP+ A+A D +K W + +Q+ H A +NS+ + G + A
Sbjct: 190 FANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITAS 249
Query: 433 N 433
N
Sbjct: 250 N 250
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN++S HP+ + LITA DST ++ D+ +YTL G
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 74 H 74
H
Sbjct: 271 H 271
Score = 98 (39.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S D +K+ DL G+L +L GH G + S +
Sbjct: 229 HTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFA 288
Query: 278 SCGDDRTVKCWDLEYNKA 295
S G D V W ++ A
Sbjct: 289 SGGSDEQVMVWKTNFSAA 306
Score = 84 (34.6 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH ++ ++ L + DS ++W ++ + Y L GH + + V
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Score = 81 (33.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+A+G ++ V SV+G + + + H ++V ++ L+TA D T +VW V
Sbjct: 77 VASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH 134
Query: 64 TKANVYTLTGHTNTI 78
+ +++L+ H N +
Sbjct: 135 RQKFLFSLSQHINWV 149
Score = 78 (32.5 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
I + H N + HP+ + AG D T +VWDVR + HT + S+
Sbjct: 181 IHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSL 236
Score = 66 (28.3 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V + P+ ++ + RD T +W K HT T+ SV
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV 110
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVR 21
VW + K SL+ H+ VR
Sbjct: 130 VWTVHRQKFLFSLSQHINWVR 150
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 239 (89.2 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 72/259 (27%), Positives = 112/259 (43%)
Query: 202 KPQWHAPWK-LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
KP W + + GH V V+ + A+ S D+ +K+WD TG L+ +L GH
Sbjct: 278 KPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGH 337
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
VR + S L + D TVK WD +Q + S+ F + L
Sbjct: 338 SDLVRSVIFS-HDSRLLASASDSTVKIWDT--GTGSLQHTLEGHRDWVRSVIFSHDSQLL 394
Query: 321 ITTEADKTVKLYKEDDSA---TEESH-----PVI---------TGSHDCTIRLWDLAAGK 363
+ D TVK++ + T E H VI + S D T+++WD G
Sbjct: 395 ASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 454
Query: 364 SLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVN 422
TL H+ VRSV + ASAS D ++ W +G L GH++++ S+ +
Sbjct: 455 LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFS 514
Query: 423 NEGVLVSGADNG-TMCFWD 440
++ L++ A N T+ WD
Sbjct: 515 HDSRLLASASNDQTVRIWD 533
Score = 190 (71.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 66/227 (29%), Positives = 95/227 (41%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L + GH VR V + A+ S D +K+WD TG L+ +L GH VR + S
Sbjct: 330 LQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 388
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L S DD TVK WD +Q + S+ F + L + D TVK
Sbjct: 389 HDSQLLASASDDSTVKIWDT--GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 446
Query: 331 LYKEDDSA---TEESH-----PVI---------TGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ + T E H VI + S D T+R+WD G TL H
Sbjct: 447 IWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSS 506
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
V SV+ + ASAS D ++ W E + +Q+ +A I ++
Sbjct: 507 LVTSVSFSHDSRLLASASNDQTVRIWDI-EARSLQHTFDLDATIEAM 552
Score = 186 (70.5 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 52/168 (30%), Positives = 75/168 (44%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L + GH WVR V ++ A+ S D +K+WD TG L+ +L GH VR + S
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 472
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIF-SMTFDNSGSRLITTEADKTV 329
L S DDRTV+ WD E +++ S + S++F + L + D+TV
Sbjct: 473 HDSRLLASASDDRTVRIWDTEKGS---HKHTLEGHSSLVTSVSFSHDSRLLASASNDQTV 529
Query: 330 KLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
+++ D A H T D TI SL K S+RS
Sbjct: 530 RIW--DIEARSLQH---TFDLDATIEAMRFDKATSLWIQVTVKASIRS 572
Score = 177 (67.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 61/212 (28%), Positives = 93/212 (43%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP-VQPGSMDS-ESGIFS--- 310
+L GH +V ++ S L S DDRTVK WD E G D S IFS
Sbjct: 291 ALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 311 -MTFDNSGSRLI-----TTEADKTVKLYKEDDSATEESHP---VITGSHDCTIRLWDLAA 361
+ S S + T T++ +++ + SH + + S D T+++WD
Sbjct: 351 RLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC 420
G TL H+ VRSV + ASAS D+ +K W G L GH + S+
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 470
Query: 421 VNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+++ +L S +D+ T+ WD G + L+
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLE 502
Score = 91 (37.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD TG L+ +L GH VR + I H + +L +A DST ++W
Sbjct: 363 IWDTGTGSLQHTLEGHRDWVRSV---------------IFSHDS-QLLASASDDSTVKIW 406
Query: 61 DVRTKANVYTLTGHTNTIASVV 82
D T + +TL GH + + SV+
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVI 428
Score = 89 (36.4 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
GH ++V ++S +L +A D T ++WD T + +TL GH++ + SV+
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Score = 78 (32.5 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 26 IRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
++H GH V ++ +L +A DST ++WD T + +TL GH + + SV+
Sbjct: 330 LQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVI 386
Score = 57 (25.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVN--TISLHPT 44
+WD TG L+ +L GH VR + + H L+S + T+ + T
Sbjct: 322 IWDTETGSLQHTLEGHSDLVRSV-IFSHDSRLLASASDSTVKIWDT 366
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 225 (84.3 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 72/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 328 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 385
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 386 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 438
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 439 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G + +++ C+ N+
Sbjct: 499 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 558 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 588
Score = 194 (73.4 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 296 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 352
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 472
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 473 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 530
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 531 KTGQCLQTLQ 540
Score = 58 (25.5 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNT 77
G +R V++ GH V T L + +++ D+T +VW T + TL GHT
Sbjct: 290 GELRSPKVLK---GHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 78 IAS 80
+ S
Sbjct: 346 VWS 348
Score = 54 (24.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 327 VWSAVTGKCLRTLVGHTGGV 346
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 189 (71.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 70/250 (28%), Positives = 104/250 (41%)
Query: 205 WHAPWK-LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W+ + L +SGH + CV G W + S DK I++WD GK L GH
Sbjct: 254 WNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAAR 312
Query: 264 VRGLTVSPRHPYLFSCGD--DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
V L++S H D D K + E KA + + +SG + + +LI
Sbjct: 313 VNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGE-RLVSASDDLQLI 371
Query: 322 TTEADKTVK-LYKEDDSATEESH----P----VITGSHDCTIRLWDLAAGKSLCTLTNHK 372
+ K+ K + K +H P + T S D ++RLWD GK L TL H
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV 431
Query: 373 KSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS-- 429
+V A + S+S D +K W K +LPGH + ++ + +G V+
Sbjct: 432 AAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491
Query: 430 GADNGTMCFW 439
GAD W
Sbjct: 492 GADKAVR-IW 500
Score = 183 (69.5 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 55/232 (23%), Positives = 113/232 (48%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
+A + G A+GS D +++W++ L +L+GH + + ++ +++S D+T
Sbjct: 233 LAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSSSYDKT 291
Query: 285 VKCWDLEYNK---------APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
++ WD + K A V S+ +E + S +D++ + + +D+ K +
Sbjct: 292 IRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKP-KSFSDERRKAKERY 350
Query: 336 DSATEES-HPVITGSHDCTIRLWD-LAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
++ ++S +++ S D + LWD + K + + H+K V + P A+AS D
Sbjct: 351 EACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFD 410
Query: 394 N-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRT 443
+ ++ W GKF+ L GH A + + + +LVS + + T+ WD R+
Sbjct: 411 SSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS 462
Score = 159 (61.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 62/252 (24%), Positives = 102/252 (40%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH 273
+ GH WV CVA P ATGS D I+ WD G + +L H + L P H
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLH 232
Query: 274 ------PYLFSCGD-DRTVKCWDLEY---------NKAPVQPGSMDSESGIFSMTFDNSG 317
PYL + G D TV+ W+++ + AP+ ++ I+S ++D +
Sbjct: 233 LAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKT- 291
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLA--AGKSLCTLTNHKKSV 375
R+ + K + + K A +H ++ H +D KS K
Sbjct: 292 IRIWDAKDGKCLHILK--GHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKER 349
Query: 376 RSVALHPTLYMFASASPD-NIKQWKCPEG-KFIQNLPGHNAIINSICVNNEGVLVSGAD- 432
L + SAS D + W + K I + GH ++N + +G ++ A
Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 433 NGTMCFWDWRTG 444
+ ++ WD +TG
Sbjct: 410 DSSVRLWDGKTG 421
Score = 94 (38.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 20 VRGLT-VIRHYHGHLSSVNTISLHP-TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNT 77
VR +T +GH ++ + P T L+T D TAR+WD T+ + T+ GHTN
Sbjct: 120 VRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNW 179
Query: 78 IASV 81
++ V
Sbjct: 180 VSCV 183
Score = 80 (33.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 47 VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+L + +D+T R+W+V+ + ++TL+GHT I V
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCV 275
Score = 69 (29.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVY-TLTGHTNTIASVV 82
T I GH + V+ ++ P ++ T D+T R WD + + + L HT I ++
Sbjct: 168 TPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALC 227
Query: 83 TQ 84
Q
Sbjct: 228 WQ 229
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 228 (85.3 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 73/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 459 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 516
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 517 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 569
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 570 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 629
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G + +++ C+ N+
Sbjct: 630 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN 688
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD RTG F R V SG
Sbjct: 689 FVITSSDDGTVKLWDLRTG-EFIRNLVTLESG 719
Score = 194 (73.4 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 427 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 483
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 484 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 543
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 544 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 603
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 604 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 661
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 662 KTGQCLQTLQ 671
Score = 57 (25.1 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 479
Score = 54 (24.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 458 VWSAVTGKCLRTLVGHTGGV 477
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 205 (77.2 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 52 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 111
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 172 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 231
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 232 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 291
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 292 SAALENDKTIKLW 304
Score = 188 (71.2 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 62/213 (29%), Positives = 97/213 (45%)
Query: 199 PMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL 257
P P KP + + L +GH V V P EW A+ SADK+IK+W GK + ++
Sbjct: 2 PTPVKPNYALKFTL----AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 57
Query: 258 TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPG--------SMDSESG- 307
+GH + + S L S DD+T+K WD+ K G + + +S
Sbjct: 58 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 117
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 363 KSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ L TL + V V P +A+ DN
Sbjct: 178 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Score = 159 (61.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 191 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 220
Score = 123 (48.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 178 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 237
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 238 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 272
Score = 105 (42.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 215 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 274
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 275 TDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 96 (38.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 251 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 307
Score = 90 (36.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 248 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 305
Score = 83 (34.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 151
Score = 81 (33.6 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 59 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 106
Score = 59 (25.8 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Score = 43 (20.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 13 FTLAGHTKAVSSV 25
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 225 (84.3 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 72/272 (26%), Positives = 129/272 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + + +GS D+ +KVW+ TG+ +L GH +
Sbjct: 328 WSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 385
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + + S D T++ WD+E + V G + + + + +D G R+++
Sbjct: 386 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHV---AAVRCVQYD--GRRVVS 438
Query: 323 TEADKTVKLYKEDDSA---TEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ + T + H V++GS D +IR+WD+ G + T
Sbjct: 439 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
LT H+ + L + + +A +K W G+ +Q L G + +++ C+ N+
Sbjct: 499 LTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+++ +D+GT+ WD +TG F R V SG
Sbjct: 558 FVITSSDDGTVKLWDLKTG-EFIRNLVTLESG 588
Score = 194 (73.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 66/250 (26%), Positives = 107/250 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH V GN +GS D +KVW TGK +L GH G V + R
Sbjct: 296 KVLKGHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--R 352
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLITT-----EA 325
+ S DRT+K W+ E + S + SGSR T E
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412
Query: 326 DKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ + + +A + V++G++D +++WD L TL H V S+
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 472
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+++ + + +I+ W G I L GH ++ + + + + +LVSG + T+ WD
Sbjct: 473 G-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDI 530
Query: 442 RTGYNFQRLQ 451
+TG Q LQ
Sbjct: 531 KTGQCLQTLQ 540
Score = 57 (25.1 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW T + TL GHT + S
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Score = 54 (24.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW TGK +L GH G V
Sbjct: 327 VWSAVTGKCLRTLVGHTGGV 346
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 181 (68.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 63/205 (30%), Positives = 87/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + T S DK +KVW + SLT H+ VR SP
Sbjct: 98 VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ V S G + + F SG+ + D TVK+
Sbjct: 158 RLIVSASDDKTVKLWD-KTSRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP +IT S D T+++ DL G+ L TL H+
Sbjct: 215 DTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 180 (68.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 60/233 (25%), Positives = 100/233 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH V CV + A+GS D + +W + TGH +V + S
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S D+TV+ W + K + + + S+ F + G L+T DKTVK
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTAT-VRSVHFCSDGQLLVTASDDKTVK 128
Query: 331 LYKEDD-----SATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ S T+ + P +++ S D T++LWD + + + + H
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V V HP+ A+A DN +K W + +Q+ H+A +N++ + G
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG 241
Score = 173 (66.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 205 WHA-PW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
WH P + YR +GH V CV P A+GS DK +++W H
Sbjct: 46 WHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTA 104
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSRLI 321
+VR + L + DD+TVK W + S+ + + F G ++
Sbjct: 105 TVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLF---SLTQHINWVRCAKFSPDGRLIV 161
Query: 322 TTEADKTVKLYKEDDSATEES-------------HP----VITGSHDCTIRLWDLAAGKS 364
+ DKTVKL+ + S HP + D T+++WD +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRL 221
Query: 365 LCTLTNHKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNN 423
+ H +V +++ HP+ Y+ ++S +K EG+ + L GH ++ +
Sbjct: 222 VQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 424 EG 425
G
Sbjct: 282 TG 283
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 44/164 (26%), Positives = 70/164 (42%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G V C D N + GSMDS I+ M + R T D + + +
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCV-----NFS 70
Query: 340 EESHPVITGSHDCTIRLW-DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
H + +GS D T+R+W G+S H +VRSV + +AS D +K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTASDDKTVKV 129
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
W +F+ +L H + + +G ++VS +D+ T+ WD
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V R +++HY H ++VN +S HP+ + LITA DST ++ D+ +YTL G
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 74 HTNTIASV 81
H +V
Sbjct: 270 HQGPATTV 277
Score = 102 (41.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 278 SCGDDRTVKCWDLEYN 293
S G D V W ++
Sbjct: 288 SGGSDEQVMVWKSNFD 303
Score = 89 (36.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH +V + L + DST +W ++ ++ Y TGH + + V
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Score = 85 (35.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G + +L + ++ + + GH +V ++ P+ +L + RD T R+W
Sbjct: 34 LASGSMDSTLM--IWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
Query: 64 TKANVYTLTGHTNTIASV 81
K HT T+ SV
Sbjct: 92 VKGESTVFRAHTATVRSV 109
Score = 85 (35.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +V+G + + + H ++V ++ +L+TA D T +VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 64 TKANVYTLTGHTNTI 78
+ +++LT H N +
Sbjct: 134 RQRFLFSLTQHINWV 148
Score = 76 (31.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ Y H V + HP+ + AG D+T +VWD RT
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Score = 57 (25.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H++ V P ++++A D T ++WD ++ V++ H + V
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 193
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 205 (77.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 174 STENQLVPTTASNTQIIQQAKA-KALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+TE + T A+ Q A A ++ P P KP + + L +GH V V P
Sbjct: 2 ATEEKKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTL----AGHTKAVSSVKFSPNG 57
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K WD+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 292 YNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSAT 339
K G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 340 E---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 123 (48.4 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 105 (42.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 83 (34.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 205 (77.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/239 (28%), Positives = 109/239 (45%)
Query: 174 STENQLVPTTASNTQIIQQAKA-KALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+TE + T A+ Q + A ++ P P KP + + L +GH V V P
Sbjct: 2 ATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTL----AGHTKAVSSVKFSPNG 57
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K WD+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 292 YNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSAT 339
K G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 340 E---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 123 (48.4 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 105 (42.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 83 (34.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 205 (77.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/239 (28%), Positives = 109/239 (45%)
Query: 174 STENQLVPTTASNTQIIQQAKA-KALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+TE + T A+ Q + A ++ P P KP + + L +GH V V P
Sbjct: 2 ATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTL----AGHTKAVSSVKFSPNG 57
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K WD+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 292 YNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSAT 339
K G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 340 E---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 123 (48.4 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 105 (42.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 83 (34.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 205 (77.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/239 (28%), Positives = 109/239 (45%)
Query: 174 STENQLVPTTASNTQIIQQAKA-KALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+TE + T A+ Q + A ++ P P KP + + L +GH V V P
Sbjct: 2 ATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTL----AGHTKAVSSVKFSPNG 57
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K WD+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 292 YNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSAT 339
K G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 340 E---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 123 (48.4 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 105 (42.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 83 (34.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 205 (77.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 66/231 (28%), Positives = 105/231 (45%)
Query: 182 TTASNTQIIQQAKA-KALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSA 239
T A+ Q + A ++ P P KP + + L +GH V V P EW A+ SA
Sbjct: 10 TEAARAQPTPSSSATQSKPTPVKPNYALKFTL----AGHTKAVSSVKFSPNGEWLASSSA 65
Query: 240 DKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQ 298
DK+IK+W GK + +++GH + + S L S DD+T+K WD+ K
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 299 PG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHP 344
G + + +S I S +FD S + T + KT+ + + SA +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 123 (48.4 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 105 (42.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L T ++ L GH
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
V P + S +D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 96 (38.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEIVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 83 (34.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 184 (69.8 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 64/205 (31%), Positives = 88/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + F T S DK IKVW K SL+ H+ VR SP
Sbjct: 129 VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 188
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ V S G + + F SG+ + D TVK+
Sbjct: 189 RLIVSASDDKTVKLWD-KTSRECVH--SYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP ++T S D T+++ DL G+ L TL H+
Sbjct: 246 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 305
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 306 TTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 63/246 (25%), Positives = 104/246 (42%)
Query: 198 LPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL 257
L M PQ P L R GH V CV + A+GS D + VW +
Sbjct: 31 LTMALPQ-EDP-SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF 88
Query: 258 TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSG 317
TGH +V + SP L S D+TV+ W + K + + + S+ F + G
Sbjct: 89 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTAT-VRSVHFCSDG 146
Query: 318 SRLITTEADKTVKLY---KEDDSATEESH----------P----VITGSHDCTIRLWDLA 360
+T DKT+K++ ++ + H P +++ S D T++LWD
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
+ + + + H V V HP+ A+A DN +K W + +Q+ H+A +N++
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Query: 420 CVNNEG 425
+ G
Sbjct: 267 SFHPSG 272
Score = 163 (62.4 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 57/255 (22%), Positives = 96/255 (37%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
KPQ A YR +GH V CV P A+GS DK +++W H
Sbjct: 80 KPQSRA----YR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHT 134
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP---------VQPGSMDSESGIFSMT 312
+VR + + DD+T+K W K V+ + +
Sbjct: 135 ATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSA 194
Query: 313 FDNSGSRLITTEADKTVKLYKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLC 366
D+ +L + + V Y E + HP V D T+++WD+ + L
Sbjct: 195 SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 254
Query: 367 TLTNHKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
H +V +++ HP+ Y+ ++S +K EG+ + L GH ++ + G
Sbjct: 255 HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 314
Query: 426 -VLVSGADNGTMCFW 439
SG + + W
Sbjct: 315 EYFASGGSDEQVMVW 329
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G V C D +N + GSMDS ++ M + R T D + + +
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCV-----NFS 101
Query: 340 EESHPVITGSHDCTIRLW-DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
H + +GS D T+R+W G+S H +VRSV F +AS D IK
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKV 160
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
W KF+ +L H + + +G ++VS +D+ T+ WD
Sbjct: 161 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN +S HP+ + L+TA DST ++ D+ +YTL G
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 300
Query: 74 HTNTIASV 81
H +V
Sbjct: 301 HQGPATTV 308
Score = 105 (42.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 29/98 (29%), Positives = 43/98 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 318
Query: 278 SCGDDRTVKCWD-----LEYNKA-PVQ--PGSMDSESG 307
S G D V W ++Y + VQ P ++ S SG
Sbjct: 319 SGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSG 356
Score = 86 (35.3 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH +V + + L + DS VW ++ ++ Y TGH + + V
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 98
Score = 83 (34.3 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ GH +V ++ P+ +L + RD T R+W K HT T+ SV
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV 140
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ Y H V + HP+ + AG D+T +VWDVRT
Sbjct: 211 VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 249
Score = 72 (30.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +++G + + + H ++V ++ +TA D T +VW
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 64 TKANVYTLTGHTNTI 78
+ +++L+ H N +
Sbjct: 165 RQKFLFSLSQHINWV 179
Score = 57 (25.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H++ V P ++++A D T ++WD ++ V++ H + V
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 224
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 184 (69.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 63/205 (30%), Positives = 88/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + F T S DK +KVW K SL+ H+ VR SP
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ V S G + + F SG+ + D TVK+
Sbjct: 158 RLIVSASDDKTVKLWD-KTSRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP ++T S D T+++ DL G+ L TL H+
Sbjct: 215 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 176 (67.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 57/242 (23%), Positives = 95/242 (39%)
Query: 205 WHA-PW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
WH P + YR +GH V CV P A+GS DK +++W H
Sbjct: 46 WHMKPQTRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTA 104
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSRLI 321
+VR + + DD+TVK W K S+ + + F G ++
Sbjct: 105 TVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF---SLSQHINWVRCAKFSPDGRLIV 161
Query: 322 TTEADKTVKLYKEDDSATEES-------------HP----VITGSHDCTIRLWDLAAGKS 364
+ DKTVKL+ + S HP + D T+++WD+ +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 221
Query: 365 LCTLTNHKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNN 423
L H +V +++ HP+ Y+ ++S +K EG+ + L GH ++ +
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 424 EG 425
G
Sbjct: 282 TG 283
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/240 (24%), Positives = 99/240 (41%)
Query: 206 HAPW--KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
H P L R GH V V + A+GS D + VW + GH +
Sbjct: 4 HCPEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDA 63
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
V + SP L S D+TV+ W + K + + + S+ F + G +T
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTAT-VRSVHFCSDGQSFVTA 121
Query: 324 EADKTVKLY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLC 366
DKTVK++ ++ + H P +++ S D T++LWD + + +
Sbjct: 122 SDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 181
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
+ H V V HP+ A+A DN +K W + +Q+ H+A +N++ + G
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN +S HP+ + L+TA DST ++ D+ +YTL G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 74 HTNTIASV 81
H +V
Sbjct: 270 HQGPATTV 277
Score = 103 (41.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 278 SCGDDRTVKCWDLEYN 293
S G D V W ++
Sbjct: 288 SGGSDEQVMVWKSNFD 303
Score = 88 (36.0 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G + L V ++ T + GH +V ++ P+ +L + RD T R+W
Sbjct: 34 LASGSMDSCLM--VWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
Query: 64 TKANVYTLTGHTNTIASV 81
K HT T+ SV
Sbjct: 92 VKGESTVFRAHTATVRSV 109
Score = 81 (33.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH +V ++ L + DS VW ++ + Y GH + + V
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCV 67
Score = 80 (33.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ Y H V + HP+ + AG D+T +VWDVRT
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +V+G + + + H ++V ++ +TA D T +VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 64 TKANVYTLTGHTNTI 78
+ +++L+ H N +
Sbjct: 134 RQKFLFSLSQHINWV 148
Score = 57 (25.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H++ V P ++++A D T ++WD ++ V++ H + V
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 193
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 158 (60.7 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKF 405
+ S D T++LWD GK LC+ H++ V S+A P AS S D +I W EGK
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKI 575
Query: 406 IQNLPGHNAIINSICVNNEGVLVSG--ADNGTMCFWDWR 442
++ G+ I +C N EG ++ ADN ++C D+R
Sbjct: 576 VKTYTGNGGIFE-VCWNKEGNKIAACFADN-SVCVLDFR 612
Score = 128 (50.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 55/237 (23%), Positives = 102/237 (43%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL---- 290
ATGS D ++W L G+L +L+ H G + L + + YL + DRT WD+
Sbjct: 340 ATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEE 398
Query: 291 -----EYNKAPVQPGSMDSESGI-FSMTFDNSGSRLIT---TEADKTVKLYKEDDSAT-- 339
E++ P +D + + F+ + +S L T KT ++ + +
Sbjct: 399 WKQQFEFHSGPTL--DVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKW 456
Query: 340 EESHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFAS 389
+ + ++ S D T ++W++ + L H K + ++ PT AS
Sbjct: 457 DPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLAS 516
Query: 390 ASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
AS D+ +K W GK + + GH + S+ + G + SG+ + ++ W + G
Sbjct: 517 ASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 55/237 (23%), Positives = 96/237 (40%)
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
H P R++ GH V A P A+GS D ++W + G K TG ++
Sbjct: 252 HIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGR--NIN 309
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
L + +H S + V D + GS D ++ I+++ LI+T +
Sbjct: 310 ALIL--KHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-----GELISTLS 362
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
++ ++ ++TGS D T +WD+ A + H V +
Sbjct: 363 KHKGPIFSL--KWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV- 419
Query: 386 MFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
FA++S D+ I K E + + GH +N + + G +L S +D+ T W+
Sbjct: 420 SFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Score = 123 (48.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +K+WD GK+ S GH V L SP Y+ S D+++ W ++ K
Sbjct: 515 ASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGK 574
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V+ + GIF + ++ G+++ AD +V
Sbjct: 575 I-VK--TYTGNGGIFEVCWNKEGNKIAACFADNSV 606
Score = 111 (44.1 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 32/129 (24%), Positives = 51/129 (39%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ +GH G V CV +P A+ S D K+W++ L H + + SP
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT 501
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TVK WD E K ++S+ F +G + +
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNG--HREPVYSLAFSPNGEYIASG 559
Query: 324 EADKTVKLY 332
DK++ ++
Sbjct: 560 SLDKSIHIW 568
Score = 96 (38.9 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FAT S D +I + + + + TGH G V + P L SC DD T K W++
Sbjct: 418 NVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Query: 291 E 291
+
Sbjct: 478 K 478
Score = 94 (38.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ GH VN + PT +L + DSTA++W+++ V+ L HT I ++
Sbjct: 444 FTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Score = 93 (37.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W A K+ +GH V +A P E+ A+GS DK I +W + GK+ + TG+ G
Sbjct: 526 WDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG 584
Score = 78 (32.5 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 32/130 (24%), Positives = 50/130 (38%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W +L +S H G + + ++ TGS D+ VWD+ + K H G
Sbjct: 351 WTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT 410
Query: 265 RGLTVSPRHPYLF--SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
L V R+ F S D C E A G + + + +D +GS L +
Sbjct: 411 --LDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGH---QGEVNCVKWDPTGSLLAS 465
Query: 323 TEADKTVKLY 332
D T K++
Sbjct: 466 CSDDSTAKIW 475
Score = 67 (28.6 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
+R GH S V + P+ +L + D+TAR+W +
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSI 294
Score = 66 (28.3 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSS----VNTISLHPTIDVLITAGRDST 56
+W + G K TG ++ L +++H G + V T+ + +L T D
Sbjct: 291 IWSIPEGSFKAVHTGR--NINAL-ILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQ 347
Query: 57 ARVWDVRTKANVYTLTGHTNTIASV 81
AR+W + + + TL+ H I S+
Sbjct: 348 ARIWTLNGEL-ISTLSKHKGPIFSL 371
Score = 53 (23.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK 65
H + ++ + D L+T D TA VWDV+ +
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE 397
Score = 48 (22.0 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNH 371
+ +GS D +I +W + GK + T T +
Sbjct: 556 IASGSLDKSIHIWSIKEGKIVKTYTGN 582
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 206 (77.6 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 67/253 (26%), Positives = 113/253 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + +GS DK +KVW+L+TGK +L GH V
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD+ K P D S + S+ +S G R+
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 284
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + ++ + C E ++
Sbjct: 285 EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIA 344
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 345 SAALENDKTIKLW 357
Score = 196 (74.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 69/240 (28%), Positives = 110/240 (45%)
Query: 171 LVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPG 230
L P++ Q TT+SN+ A K+ KP + + L +GH V V P
Sbjct: 32 LQPNSVGQPGATTSSNSS----ASNKSSLSVKPNYTLKFTL----AGHTKAVSAVKFSPN 83
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K W+L
Sbjct: 84 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWEL 143
Query: 291 EYNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSA 338
K+ G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 144 STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 203
Query: 339 TE---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 204 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 263
Score = 154 (59.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ K++K K + +S+ +++GS D ++R+W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 244 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 273
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
TL H K+V +V P AS+S D IK W +GKF + + GH I+ + +++
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 426 -VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+LVSG+D+ T+ W+ TG + + L+
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLK 153
Score = 119 (46.9 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 40/155 (25%), Positives = 72/155 (46%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ GH I
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 290
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ ++ Q+LQ
Sbjct: 291 ANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
Score = 100 (40.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
W ++ K + +GH C+ G +W +GS D ++ +W+L + ++ L GH
Sbjct: 268 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGH 327
Query: 261 VGSVRGLTVSPRHPYLFSCG--DDRTVKCW 288
+V P + S +D+T+K W
Sbjct: 328 TDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 94 (38.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + TGH + + ++ S
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ +K VQ + + T + +I + A DKT+KL+K D
Sbjct: 304 GSEDNMVYIWNLQ-SKEVVQ--KLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSD 360
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + + L H +V A HPT + ASA+ +N IK WK
Sbjct: 301 IVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDVRT + TL H++ +++V
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 204
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ +L++ D T +VW++ T ++ TL GH+N +
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV 159
Score = 58 (25.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+ + P + L ++ D ++W T++GH I+ V
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Score = 42 (19.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 50 TAGRDSTARVWDVRTKANV---YTLTGHTNTIASV 81
T+ S + + K N +TL GHT +++V
Sbjct: 44 TSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAV 78
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 202 (76.2 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 44/120 (36%), Positives = 67/120 (55%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GHL V CV P + ATGS+DK +++WD+ TG+ GH V L +SP
Sbjct: 496 RIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPD 555
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
Y+ S +D T+ WDL + + P M S ++S+++ GS L + AD TVKL+
Sbjct: 556 GRYMASGDEDGTIMMWDLSTARC-ITP-LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 181 (68.8 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 54/201 (26%), Positives = 88/201 (43%)
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYN---------KAPVQPGSMDSESG 307
L GH G V T SP ++ S D T++ W + N PV
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 308 IFSMTFDNSGSRLITTEADKTVKLYKEDDSATE--ESHP----VITGSHDCTIRLWDLAA 361
F+ + +R+ + + + +++ S + + HP + TGS D T+RLWD+
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC 420
G+ + H+ V S+A+ P AS D I W + I L GHN+ + S+
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLS 593
Query: 421 VNNEG-VLVSGADNGTMCFWD 440
+ EG +L SG+ + T+ WD
Sbjct: 594 YSGEGSLLASGSADCTVKLWD 614
Score = 166 (63.5 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 59/243 (24%), Positives = 100/243 (41%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT-GKLKLSLTGHVGSVRGLTVS 270
Y ++ H G + C ++ A G +D IKVWD+A G+ ++
Sbjct: 346 YTFVNTHNG-LNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIG 404
Query: 271 P--RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
P R Y G V Y+ PG + S + D + RL +T+ +
Sbjct: 405 PNGRRSYTLLLGHSGPV------YSATFSPPGDF-----VLSSSADTT-IRLWSTKLNAN 452
Query: 329 VKLYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ YK D + H + SHD T R+W + + L + H V V HP
Sbjct: 453 LVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP 512
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G+ ++ GH +++ S+ ++ +G + SG ++GT+ WD
Sbjct: 513 NCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 572
Query: 441 WRT 443
T
Sbjct: 573 LST 575
Score = 123 (48.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ GH V +A+ P + A+G D I +WDL+T + L GH V L+ S
Sbjct: 538 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 597
Query: 273 HPYLFSCGDDRTVKCWDL 290
L S D TVK WD+
Sbjct: 598 GSLLASGSADCTVKLWDV 615
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S+ + +R GHLS V+ + HP + + T D T R+WDV+T V G
Sbjct: 483 TARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG 542
Query: 74 HTNTIASV 81
H + + S+
Sbjct: 543 HRSMVLSL 550
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 229 PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW 288
P +FA+ S D+ ++W + + + GH+ V + P Y+ + D+TV+ W
Sbjct: 470 PFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLW 529
Query: 289 DLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDD------------ 336
D++ + V+ + S + S+ G + + + D T+ ++
Sbjct: 530 DVQTGEC-VRI-FIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNS 587
Query: 337 -----SATEESHPVITGSHDCTIRLWDLAAGKSL 365
S + E + +GS DCT++LWD+ + L
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 621
Score = 74 (31.1 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
GH V + + P D ++++ D+T R+W + AN+ GH
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGH 459
Score = 59 (25.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT----GHVGSVRGLTVS 270
+ GH V ++ A+GSAD +K+WD+ T KL+ G+ +R L
Sbjct: 582 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV-TSSTKLTKAEEKNGNSNRLRSLRTF 640
Query: 271 P 271
P
Sbjct: 641 P 641
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/94 (23%), Positives = 36/94 (38%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V P + D TAR+W + + + GH + + V +
Sbjct: 456 YKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN 515
Query: 89 QVGT----KTVLL---ESCERIMFVLGTAGFLLS 115
+ T KTV L ++ E + +G +LS
Sbjct: 516 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 549
Score = 37 (18.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 48 LITAG-RDSTARVWDV 62
L+ G DS+ +VWD+
Sbjct: 366 LVAGGFSDSSIKVWDM 381
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 227 (85.0 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 71/245 (28%), Positives = 124/245 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ I+G L W + P A+ S D I++WD + K +SL+GH SV L
Sbjct: 226 KFITG-LSW-EPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGE 283
Query: 273 HPYLFSCGDDRTVKCWD---------LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
++S DRTV+ ++ L+ + V +++++ + + ++D++G T
Sbjct: 284 G-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTL 342
Query: 324 EADKTVKLYKEDD-SATEESHPV-ITGSHDCTIRLWDLAAGK-SLCTLTNHKKSVRSVAL 380
E + V L + +D A + + I+GS D T+ +W+ + K S+ LT H++ + V+
Sbjct: 343 EEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSF 402
Query: 381 HPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCF 438
P FASAS D +IK W GKF+ N GH + +C +++ LVSG+ + T+
Sbjct: 403 SPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKI 462
Query: 439 WDWRT 443
WD +T
Sbjct: 463 WDIKT 467
Score = 165 (63.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V+ P +FA+ S DK IK+WD +GK + GHVG+V + S
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSR 449
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
YL S D T+K WD++ K + PG D ++++ + G R+ + D+ ++++
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKMEKELPGHADE---VYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 111 (44.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 54/220 (24%), Positives = 89/220 (40%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH +V + P ++ G D+T R+WD+ T +TL GHTN + V ++
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 91 GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSV 150
T +E RI + T L S L F T W+ + +C + L + S
Sbjct: 198 ATAG--MEGDIRI-WCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKC-VRLASSSKDS- 252
Query: 151 HTLVFRSLKRTHDMFISCQELVPSTENQLVPTT---ASNTQIIQQAKAKALPMPKPQWHA 207
T+ R D SC+ L+ + + + T I ++ + + +
Sbjct: 253 -TI------RIWDTE-SCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNT---T 301
Query: 208 PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWD 247
+L RV+ GH WV +A+ + TGS D K +D
Sbjct: 302 DGRLVRVLDGHAHWVNTLALNT-DYVLRTGSYDHTGKEYD 340
Score = 95 (38.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/148 (28%), Positives = 66/148 (44%)
Query: 226 AVEPGNEWFATGSADKIIKVWDLATGKLKLS-LTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
A G E +GS D + +W+ + K +S LTGH + ++ SP Y S D++
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKS 417
Query: 285 VKCWDLEYNKA----PVQPGSMDSESGIFSMTFDNSGSRLITTEA-D-KTVKLYKE---- 334
+K WD + K G++ + SGS+ T + D KT K+ KE
Sbjct: 418 IKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGH 477
Query: 335 -DDSATEESHP----VITGSHDCTIRLW 357
D+ T + P V +GS D +R+W
Sbjct: 478 ADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 56 (24.8 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 45 IDVLITAGRDSTARVWDVR-TKANVYTLTGHTNTI 78
+++LI+ D T +W+ TK ++ LTGH I
Sbjct: 363 MEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLI 397
Score = 55 (24.4 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIA 79
++R GH VNT++L+ T VL T D T + +D +A L + + A
Sbjct: 305 LVRVLDGHAHWVNTLALN-TDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKA 358
Score = 46 (21.3 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + K +SL+GH SV
Sbjct: 256 IWDTESCKNLMSLSGHTMSV 275
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 183 (69.5 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 64/205 (31%), Positives = 88/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + F T S DK +KVW K SL+ H+ VR SP
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ V S G + + F SG+ + D TVK+
Sbjct: 120 RLIVSASDDKTVKLWD-KSSRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP +IT S D T+++ DL G+ L TL H+
Sbjct: 177 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 236
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 237 TTVAFSRTGEYFASGGSDEQVMVWK 261
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 240 DKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQP 299
D + VW + TGH +V + SP L S D+TV+ W + K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTV 60
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLY---KEDDSATEESH----------P-- 344
+ + + S+ F + G +T DKTVK++ ++ + H P
Sbjct: 61 FRAHTAT-VRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 345 --VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCP 401
+++ S D T++LWD ++ + + + H V V HP+ A+A DN +K W
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 402 EGKFIQNLPGHNAIINSICVNNEG 425
+ +Q+ H+A +N + + G
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSG 203
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN +S HP+ + LITA DST ++ D+ +YTL G
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 231
Query: 74 HTNTIASV 81
H +V
Sbjct: 232 HQGPATTV 239
Score = 106 (42.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 343 HPVITGSHDCTIRLW-DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
H + +GS D T+R+W G+S H +VRSV F +AS D +K W
Sbjct: 36 HLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 94
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
KF+ +L H + + +G ++VS +D+ T+ WD
Sbjct: 95 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Score = 105 (42.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/98 (29%), Positives = 41/98 (41%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 190 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 249
Query: 278 SCGDDRTVKCW----DL----EYNKAPVQPGSMDSESG 307
S G D V W D+ E K P P ++ S G
Sbjct: 250 SGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMG 287
Score = 84 (34.6 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ GH +V ++ P+ +L + RD T R+W K HT T+ SV
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 71
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ Y H V + HP+ + AG D+T +VWDVRT
Sbjct: 142 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Score = 72 (30.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +V+G + + + H ++V ++ +TA D T +VW
Sbjct: 38 LASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 95
Query: 64 TKANVYTLTGHTNTI 78
+ +++L+ H N +
Sbjct: 96 RQKFLFSLSQHINWV 110
Score = 57 (25.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H++ V P ++++A D T ++WD ++ V++ H + V
Sbjct: 106 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYV 155
Score = 56 (24.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTIASV 81
DS VW ++ ++ Y TGH + + V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCV 29
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 204 (76.9 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 174 STENQLVPTTASNTQII-QQAKAKALPMP-KPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+TE + T AS TQ + ++ P P KP + + L +GH V V P
Sbjct: 2 ATEEKKPETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTL----AGHTKAVSSVKFSPNG 57
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
EW A+ SADK+IK+W GK + +++GH + + S L S DD+T+K WD+
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 117
Query: 292 YNKA-PVQPG--------SMDSESG-IFSMTFDNSGS--RLITTEADKTVKLYKEDDSAT 339
K G + + +S I S +FD S + T + KT+ + + SA
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 340 E---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVALHPTLYMFASASPDN 394
+ +++ S+D R+WD A+G+ L TL + V V P +A+ DN
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Score = 201 (75.8 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K + ISGH + VA + + S DK +K+WD+++GK +L GH V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIF-----SMTFDNS--G-SRL 320
+P+ + S D +V+ WD++ K P D S + S+ +S G R+
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 321 ITTEADKTVKLYKEDDSA-------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
T + + +K +DD+ + ++ + D T++LWD + GK L T T HK
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKN 257
Query: 374 SVRSVALHPTLY---MFASASPDNIKQ-WKCPEGKFIQNLPGH-NAIINSICVNNEGVLV 428
+ + ++ S S DN+ W + +Q L GH + +I++ C E ++
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIA 317
Query: 429 SGA--DNGTMCFW 439
S A ++ T+ W
Sbjct: 318 SAALENDKTIKLW 330
Score = 159 (61.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW---DLEYNKA------PVQPGSMD 303
LK +L GH +V + SP +L S D+ +K W D ++ K + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT------EESHPVITGSHDCTIRLW 357
S+S + D+ ++ + K +K K + +S+ +++GS D ++R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNL-PGHNAI 415
D+ GK L TL H V +V + + S+S D + + W G+ ++ L N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 416 INSICVNNEG--VLVSGADNGTMCFWDWRTG 444
++ + + G +L + DN T+ WD+ G
Sbjct: 217 VSFVKFSPNGKYILAATLDN-TLKLWDYSKG 246
Score = 114 (45.2 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 308 IFSMTFDNSGS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAG 362
I S +FD S + T + KT+ + + SA + +++ S+D R+WD A+G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 363 KSLCTLTNHKKS-VRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AII 416
+ L TL + V V P Y+ A+ + +K W +GK ++ H I
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIF 263
Query: 417 NSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ V +VSG+++ + W+ +T Q+LQ
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQ 298
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWK 399
+++GS D + +W+L + + L H V S A HPT + ASA+ +N IK WK
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 88 (36.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + D +K+WD + GK + T H + + ++ S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA---DKTVKLYKED 335
+D V W+L+ K VQ + + + T + +I + A DKT+KL+K D
Sbjct: 277 GSEDNLVYIWNLQ-TKEVVQ--KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 83 (34.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P +++++ D + R+WDV+T + TL H++ +++V
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Score = 81 (33.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH ++ ++ ++L++A D T ++WDV + + TL GH+N +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Score = 59 (25.8 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V+++ P + L ++ D ++W T++GH I+ V
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Score = 43 (20.2 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
+TL GHT ++SV
Sbjct: 39 FTLAGHTKAVSSV 51
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 183 (69.5 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 64/205 (31%), Positives = 88/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + F T S DK +KVW K SL+ H+ VR SP
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ V S G + + F SG+ + D TVK+
Sbjct: 158 RLIVSASDDKTVKLWD-KSSRECVH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP +IT S D T+++ DL G+ L TL H+
Sbjct: 215 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 59/233 (25%), Positives = 99/233 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH V CV + A+GS D + VW + TGH +V + S
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S D+TV+ W + K + + + S+ F + G +T DKTVK
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTAT-VRSVHFCSDGQSFVTASDDKTVK 128
Query: 331 LY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ ++ + H P +++ S D T++LWD ++ + + + H
Sbjct: 129 VWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V V HP+ A+A DN +K W + +Q+ H+A +N + + G
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 241
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 45/164 (27%), Positives = 70/164 (42%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G V C D N + GSMDS ++ M + R T D + + +
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCV-----NFS 70
Query: 340 EESHPVITGSHDCTIRLW-DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
H + +GS D T+R+W G+S H +VRSV F +AS D +K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
W KF+ +L H + + +G ++VS +D+ T+ WD
Sbjct: 130 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 118 (46.6 bits), Expect = 0.00055, P = 0.00055
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN +S HP+ + LITA DST ++ D+ +YTL G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 74 HTNTIASV 81
H +V
Sbjct: 270 HQGPATTV 277
Score = 105 (42.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 29/98 (29%), Positives = 41/98 (41%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 278 SCGDDRTVKCW----DL----EYNKAPVQPGSMDSESG 307
S G D V W D+ E K P P ++ S G
Sbjct: 288 SGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMG 325
Score = 85 (35.0 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH +V + L + DS VW ++ ++ Y TGH + + V
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 67
Score = 84 (34.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ GH +V ++ P+ +L + RD T R+W K HT T+ SV
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Score = 80 (33.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ Y H V + HP+ + AG D+T +VWDVRT
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Score = 72 (30.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +V+G + + + H ++V ++ +TA D T +VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 133
Query: 64 TKANVYTLTGHTNTI 78
+ +++L+ H N +
Sbjct: 134 RQKFLFSLSQHINWV 148
Score = 57 (25.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H++ V P ++++A D T ++WD ++ V++ H + V
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYV 193
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 181 (68.8 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 61/200 (30%), Positives = 89/200 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ AT S DK IKVW + + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S DS + F+ SG+ + + +D+TVK+
Sbjct: 161 SCSEDKTIKIWDTT-NKQCVNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP +IT S D T+++ DL G+ + TL H V +V+
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPDN-IKQWK 399
+FAS D + W+
Sbjct: 279 SKGGELFASGGADTQVLLWR 298
Score = 172 (65.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + VG
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ +P + S G D+TVK WD+ NK +Q + S G+ ++F SG+ LIT
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL-LQHYQVHS-GGVNCISFHPSGNYLITA 246
Query: 324 EADKTVKL 331
+D T+K+
Sbjct: 247 SSDGTLKI 254
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 54/233 (23%), Positives = 92/233 (39%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + + + P + AT S D + +W+ GH V + S
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S DRTV+ W + + + + + S+ F G L T DK++K
Sbjct: 70 PHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHT-APVRSVDFSADGQFLATASEDKSIK 127
Query: 331 ---LYKEDD--SATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+Y++ S +H P +++ S D TI++WD + + ++
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V +P+ ASA D +K W K +Q+ H+ +N I + G
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 240
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H VN IS HP+ + LITA D T ++ D+ +YTL G
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 74 HTNTIASV 81
HT + +V
Sbjct: 269 HTGPVFTV 276
Score = 119 (46.9 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D+ +KVWD+ KL H G V ++ P Y
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D T+K DL + ++ +G +F+++F G + AD V L++
Sbjct: 243 LITASSDGTLKILDLLEGRLIY---TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 114 (45.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H G V C++ P + T S+D +K+ DL G+L +L GH G V ++
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNK 294
S S G D V W +++
Sbjct: 279 SKGGELFASGGADTQVLLWRTNFDE 303
Score = 102 (41.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 32/120 (26%), Positives = 47/120 (39%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
T S D +I++W + + L +L H VR P + S S D IK W +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQVR-----CVSGFP 459
+ N N + N G ++ A + T+ WD R Q QV C+S P
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP 238
Score = 90 (36.7 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R++ GH +++ ++ L P L TA D+ +W+ + A Y GH + + SV
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Score = 89 (36.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKF 405
+ S D T+RLW H VRSV A+AS D +IK W +F
Sbjct: 77 SASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF 136
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
+ +L H + + +G ++VS +++ T+ WD
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 73 (30.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W + HT + SV
Sbjct: 56 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Score = 67 (28.6 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N + +P+ + +AG D T +VWDVR
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 63 (27.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L TA D + +VW + + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK 65
H V P ++++ D T ++WD K
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 180 (68.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 60/200 (30%), Positives = 89/200 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ AT S DK IKVW + + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S DS + F+ SG+ + + +D+TVK+
Sbjct: 161 SCSEDKTIKIWDTT-NKQCVNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP ++T S D T+++ DL G+ + TL H V +V+
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPDN-IKQWK 399
+FAS D + W+
Sbjct: 279 SKGGELFASGGADTQVLLWR 298
Score = 164 (62.8 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + VG
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ +P + S G D+TVK WD+ NK +Q + S G+ ++F S + L+T
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL-LQHYQVHS-GGVNCISFHPSDNYLVTA 246
Query: 324 EADKTVKL 331
+D T+K+
Sbjct: 247 SSDGTLKI 254
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/227 (23%), Positives = 90/227 (39%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + + + P + AT S D + +W+ GH V + S
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S DRTV+ W + + + + + S+ F G L T DK++K
Sbjct: 70 PHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHT-APVRSVDFSADGQFLATASEDKSIK 127
Query: 331 ---LYKEDD--SATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+Y++ S +H P +++ S D TI++WD + + ++
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
V +P+ ASA D +K W K +Q+ H+ +N I
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 234
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H VN IS HP+ + L+TA D T ++ D+ +YTL G
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG 268
Query: 74 HTNTIASV 81
HT + +V
Sbjct: 269 HTGPVFTV 276
Score = 119 (46.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D+ +KVWD+ KL H G V ++ P Y
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D T+K DL + ++ +G +F+++F G + AD V L++
Sbjct: 243 LVTASSDGTLKILDLLEGRLIY---TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 116 (45.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H G V C++ P + + T S+D +K+ DL G+L +L GH G V ++
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNK 294
S S G D V W +++
Sbjct: 279 SKGGELFASGGADTQVLLWRTNFDE 303
Score = 102 (41.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 32/120 (26%), Positives = 47/120 (39%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
T S D +I++W + + L +L H VR P + S S D IK W +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQVR-----CVSGFP 459
+ N N + N G ++ A + T+ WD R Q QV C+S P
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP 238
Score = 90 (36.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R++ GH +++ ++ L P L TA D+ +W+ + A Y GH + + SV
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKF 405
+ S D T+RLW H VRSV A+AS D +IK W +F
Sbjct: 77 SASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF 136
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
+ +L H + + +G ++VS +++ T+ WD
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 73 (30.8 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W + HT + SV
Sbjct: 56 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N + +P+ + +AG D T +VWDVR
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 63 (27.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L TA D + +VW + + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK 65
H V P ++++ D T ++WD K
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 63/244 (25%), Positives = 103/244 (42%)
Query: 200 MPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
M P P L R GH V CV + A+GS D + +W + TG
Sbjct: 1 MAAPSQEDP-SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTG 59
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSR 319
H +V + SP L S D+TV+ W + K + + + S+ F + G
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTAT-VRSVHFCSDGQS 117
Query: 320 LITTEADKTVKLYKEDD-----SATEESH--------P----VITGSHDCTIRLWDLAAG 362
L+T DKTVK++ S T+ + P +++ S D T++LWD +
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 363 KSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICV 421
+ + + H V V HP+ A+A DN +K W + +Q+ H+A +N++
Sbjct: 178 ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 422 NNEG 425
+ G
Sbjct: 238 HPSG 241
Score = 179 (68.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 62/205 (30%), Positives = 87/205 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V H VR V + T S DK +KVW + SLT H+ VR SP
Sbjct: 98 VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSRLITTEADKTVKL- 331
+ S DD+TVK WD + ++ + S G + + F SG+ + D TVK+
Sbjct: 158 RLIVSASDDKTVKLWD-KTSRECIH--SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
Y+ +A HP +IT S D T+++ DL G+ L TL H+
Sbjct: 215 DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 376 RSVALHPTLYMFASASPDN-IKQWK 399
+VA T FAS D + WK
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 175 (66.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 58/242 (23%), Positives = 96/242 (39%)
Query: 205 WHA-PW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
WH P + YR +GH V CV P A+GS DK +++W H
Sbjct: 46 WHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTA 104
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSRLI 321
+VR + L + DD+TVK W + S+ + + F G ++
Sbjct: 105 TVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLF---SLTQHINWVRCAKFSPDGRLIV 161
Query: 322 TTEADKTVKLYKEDD-----SATEES--------HP----VITGSHDCTIRLWDLAAGKS 364
+ DKTVKL+ + S E HP + D T+++WD +
Sbjct: 162 SASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRL 221
Query: 365 LCTLTNHKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNN 423
L H +V +++ HP+ Y+ ++S +K EG+ + L GH ++ +
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 424 EG 425
G
Sbjct: 282 TG 283
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 44/164 (26%), Positives = 69/164 (42%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G V C D N + GSMDS I+ M + R T D + + +
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCV-----NFS 70
Query: 340 EESHPVITGSHDCTIRLW-DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
H + +GS D T+R+W G+S H +VRSV +AS D +K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
W +F+ +L H + + +G ++VS +D+ T+ WD
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V R +++HY H ++VN +S HP+ + LITA DST ++ D+ +YTL G
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 74 HTNTIASV 81
H +V
Sbjct: 270 HQGPATTV 277
Score = 102 (41.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V ++ P + T S+D +K+ DL G+L +L GH G + S Y
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Query: 278 SCGDDRTVKCWDLEYN 293
S G D V W ++
Sbjct: 288 SGGSDEQVMVWKSNFD 303
Score = 89 (36.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH +V + L + DST +W ++ ++ Y TGH + + V
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Score = 85 (35.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G + +L + ++ + + GH +V ++ P+ +L + RD T R+W
Sbjct: 34 LASGSMDSTLM--IWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
Query: 64 TKANVYTLTGHTNTIASV 81
K HT T+ SV
Sbjct: 92 VKGESTVFRAHTATVRSV 109
Score = 82 (33.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LA+G ++ V +V+G + + + H ++V ++ L+TA D T +VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 64 TKANVYTLTGHTNTI 78
+ +++LT H N +
Sbjct: 134 RQRFLFSLTQHINWV 148
Score = 77 (32.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
I Y H V + HP+ + AG D+T +VWD RT
Sbjct: 180 IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 186 (70.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 65/278 (23%), Positives = 109/278 (39%)
Query: 205 WHA-PW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
WH P + YR +GH V CV P A+GS DK +++W H
Sbjct: 46 WHMKPQSRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTA 104
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSRLI 321
+VR + L + DD+TVK W K S+ + + F G ++
Sbjct: 105 TVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF---SLSQHINWVRCARFSPDGRLIV 161
Query: 322 TTEADKTVKLYKEDDSATEES-------------HP----VITGSHDCTIRLWDLAAGKS 364
+ DKTVKL+ + S HP + S D T+++WD+ +
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221
Query: 365 LCTLTNHKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNN 423
L H +V +++ HP+ Y+ ++S +K EG+ + L GH ++ +
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 424 EGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKP 461
G + + W++ NF + R V +P
Sbjct: 282 TGEYFASGGSDEQVMV-WKS--NFDVVDYREVIKVHRP 316
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 58/233 (24%), Positives = 99/233 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + V + A+GS D + VW + GH +V + S
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S D+TV+ W + K + + + S+ F + G L+T DKTVK
Sbjct: 71 PSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTAT-VRSVHFCSDGQSLVTASDDKTVK 128
Query: 331 LY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
++ ++ + H P +++ S D T++LWD + + + + H
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V V HP+ A+AS DN +K W + +Q+ H+A +N++ + G
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H ++VN +S HP+ + L+TA DST ++ D+ +YTL G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHG 269
Query: 74 HTNTIASV 81
H +V
Sbjct: 270 HQGPATTV 277
Score = 81 (33.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
RH+ GH ++ ++ L + DS VW ++ ++ Y GH + + V
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCV 67
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/173 (27%), Positives = 69/173 (39%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R H G V C A P T S D + VW +G+L L GH G V+ SP
Sbjct: 20 RFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPD 79
Query: 273 HPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDS-ESGIFSMTFDN--SGS---RLITTEA 325
+ S D +++ WD+ +K V G S E+ FS SG R I E
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEV 139
Query: 326 DKTVKLYK--------EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN 370
+++ + + S + TGS D T+ +WDL A + + N
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Score = 136 (52.9 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K V+ GH V V+ P ++ A+G DK VW++ +G+ L GH S++
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDF 160
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
SP L + D TV WDL + V +++ +G S ++ L + DKT+
Sbjct: 161 SPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTI 220
Query: 330 KLYK 333
++K
Sbjct: 221 CVWK 224
Score = 131 (51.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 32/78 (41%), Positives = 36/78 (46%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y + GH G + C+ A+GS DK I VW T L L L GH V L SP
Sbjct: 190 YHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP 248
Query: 272 RHPYLFSCGDDRTVKCWD 289
L S G RTVK WD
Sbjct: 249 DELKLASAGYSRTVKVWD 266
Score = 128 (50.1 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 38/162 (23%), Positives = 71/162 (43%)
Query: 288 WDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK------EDDSATEE 341
W L ++ PV+ + + + + + RL K + + K E S + +
Sbjct: 62 WRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPD 121
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
S + +G D +W++ +G+ + L H S++S PT A+ S D+ + W
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 401 PEGKFI---QNLPGHNAIINSICVNNEGVLVSGADNGTMCFW 439
+ NL GH I+ +C + G+L SG+ + T+C W
Sbjct: 182 RASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVW 223
Score = 123 (48.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIK-QWKCPEG 403
+ + S D +IRLWD+A K L L H++SV +V+ P AS D W+ G
Sbjct: 83 IASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSG 142
Query: 404 KFIQNLPGH-NAIINSICVNNEGVLVSGADNGTMCFWDWR 442
+ + L GH ++I +S L +G+ + T+ WD R
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182
Score = 100 (40.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS---LTGHVGSVRGLTVS 270
++ GH ++ P ++ ATGS D + +WDL +S L GH G++ L S
Sbjct: 147 LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS 206
Query: 271 PRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
L + G D+T+ W N P+Q + S+ F +L + +TV
Sbjct: 207 ASG--LLASGSWDKTICVWKPTTNNLPLQ--LKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 330 KLY 332
K++
Sbjct: 263 KVW 265
Score = 93 (37.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+GS D TI +W L H V S+A P ASA +K W C GK
Sbjct: 213 SGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKC 272
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGA 431
++ L G + ++ +G +LVSGA
Sbjct: 273 LETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 73 (30.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+R Y H VN + P L+TA D VW ++ ++ L GH + S
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKS 73
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 178 (67.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 58/246 (23%), Positives = 113/246 (45%)
Query: 215 ISGHLGWVRCVAVEPGN-----EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
++GH W+ ++ EP + F T S D ++WD+ K + L+GH +V +
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAP---------VQPGSMDSESGIFSMTFDNSGSRL 320
+++ D T+K W+ K + ++ +E + + FD++G +
Sbjct: 250 GG-DGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQY 308
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKS-LCTLTNHKKSVRSVA 379
E +K L + + + + +++GS D T+ LW+ + K LT H++ V V
Sbjct: 309 PPNE-EKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVY 367
Query: 380 LHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMC 437
P ASAS D +++ W G+F+ GH + + + + +L+SG+ + T+
Sbjct: 368 FSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLK 427
Query: 438 FWDWRT 443
W+ RT
Sbjct: 428 IWEIRT 433
Score = 155 (59.6 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH V V P +W A+ S DK +++W+ TG+ GHVG V ++ S
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K W++ K PG D +F++ + G ++++ D+ +KL+K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADE---VFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 139 (54.0 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 66/243 (27%), Positives = 103/243 (42%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+SGH V CV G+ TGS D IK+W+ GKL L GH + L +S
Sbjct: 237 LSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-- 293
Query: 275 YLFSCGD-DRTVKCWD--------LE-YNKAPVQ-PGSMDSESGIFSM-TFDNSGSRL-- 320
Y+ G D T + + LE YNK P + S S F+M ++ S S+
Sbjct: 294 YVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPK 353
Query: 321 --ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
+T +Y D + + S D ++RLW+ G+ + H V V
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKW-----IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQV 408
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTM 436
+ + S S D+ +K W+ K Q+LPGH + ++ + +G +VSG + +
Sbjct: 409 SWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468
Query: 437 CFW 439
W
Sbjct: 469 KLW 471
Score = 122 (48.0 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V GH+G V V+ + +GS D +K+W++ T KLK L GH V + SP
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 274 PYLFSCGDDRTVKCW 288
+ S G DR +K W
Sbjct: 457 EKVVSGGKDRVLKLW 471
Score = 90 (36.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V +S P L + D+T R+WD+ T+ ++T GH N + +V
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTV 157
Score = 86 (35.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 2 WDLATGKLKLS-LTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
W+ G+L+ S LTGH + +T I HLSS P +T+ +D AR+W
Sbjct: 178 WNPKKGELEGSPLTGHK---KWITGISWEPVHLSS-------PCRR-FVTSSKDGDARIW 226
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ K ++ L+GHT + V
Sbjct: 227 DITLKKSIICLSGHTLAVTCV 247
Score = 85 (35.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 345 VITGSHDCTIRLWDLAAGK-SLCTLTNHKKSVRSVALHPT-----LYMFASASPD-NIKQ 397
+++GS I W+ G+ LT HKK + ++ P F ++S D + +
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
W K I L GH + + +G++ +G+ + T+ W+ G + L+
Sbjct: 226 WDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELK 279
Score = 49 (22.3 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V + ++ T +D T ++W+ + L GH + I S+
Sbjct: 239 GHTLAVTCVKWGGD-GIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSL 288
Score = 43 (20.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHY 29
+W+ GKL L GH + L + Y
Sbjct: 266 MWETTQGKLIRELKGHGHWINSLALSTEY 294
Score = 40 (19.1 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD+ K + L+GH +V
Sbjct: 225 IWDITLKKSIICLSGHTLAV 244
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 169 (64.5 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 52/230 (22%), Positives = 101/230 (43%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V V P ++ + S D IK WD++TG + GH VR + +S
Sbjct: 187 LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT 246
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
S D+TV W A + D E + + + T + T + +
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLV--LRDHEHAVECVEWAPD-----TAYTNVTGQ--QP 297
Query: 335 DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASASPD 393
+ ++T H + +GS D +I+ W++ G L TL H+ VR +A HP Y+ + A
Sbjct: 298 EGNST---HILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDK 354
Query: 394 NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
++ W+ + ++ + H ++++ + +++G+ + + W+ R
Sbjct: 355 TLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/234 (23%), Positives = 98/234 (41%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA-TGKLKLSLTGHVGSVRGLT 268
+L R + GH V +A++ + + S+D IK+WD T SL GH +V +T
Sbjct: 139 QLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVT 198
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADK 327
P ++ S D T+K WD+ G D + + N G+ + D+
Sbjct: 199 FLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHND---WVRMIRISNDGTLFASASLDQ 255
Query: 328 TVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMF 387
TV ++ S +S ++ H+ + + A + +T + S T +F
Sbjct: 256 TVTVW----SFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS-----THILF 306
Query: 388 ASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
+ + +IK W G + L H + + + +G L+S AD+ T+ W+
Sbjct: 307 SGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWE 360
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P A+ S D IKVWD TG+L+ +L GH +V + +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L SC D ++K WD ++ E + S+TF +G +++ D T+K
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLK-SLKGHEHTVSSVTFLPTGDFVLSASRDHTIK 216
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 58/272 (21%), Positives = 118/272 (43%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV-RTKANVYTLTGHTNTIASVVTQA 85
R GH +VN I++ L++ D + ++WD +T + +L GH +T++SV
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP 201
Query: 86 SEPQVGTKTVLLESCERIM--FVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQE-QCFLNL 142
+ G VL S + + + + T G+ + D+ +R ++I + F +
Sbjct: 202 T----GD-FVLSASRDHTIKQWDIST-GYCVYTFRGHNDW--VR--MIRISNDGTLFASA 251
Query: 143 QEVQRHSVHTLVFRSLK---RTHDMFISCQELVPSTE--NQLVPTTASNTQIIQQAKAKA 197
Q +V + +S K R H+ + C E P T N N+ I + ++
Sbjct: 252 SLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRD 311
Query: 198 LPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL 257
+ + L+ +++ H WVR +A P ++ + + DK ++VW+L+ + ++
Sbjct: 312 RSIKAWNINTGDVLFTLLA-HENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAI 370
Query: 258 TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
H V + P++ + D + K W+
Sbjct: 371 EAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 97 (39.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH + + HP ++ + D+T +VWD T TL GHT+ + + A+ Q
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ- 162
Query: 91 GTKTVLLESCERIMFV-LGTAGFLLSCLPSL 120
L SC + + L G CL SL
Sbjct: 163 ------LVSCSSDLSIKLWDFGQTYDCLKSL 187
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 198 (74.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 57/172 (33%), Positives = 84/172 (48%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V +A+ P +++ A GS D+II+VW ++ G L L GH SV + SP L S
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSL 504
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEE 341
D+T+K W+L+ ++ V ++ E GI T+ T D + + DS
Sbjct: 505 DKTIKVWELQATRS-VGLSAIKPE-GICKATY--------TGHTDFVLSVAVSPDSRWG- 553
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
++GS D +++ WDL G+S T HK SV SV P FAS S D
Sbjct: 554 ----LSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGD 601
Score = 185 (70.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
+VR +A P ++ TG+ D+ IK+WDL+T K++ +GH + L S ++ S
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 281 DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE 340
DRT + WD+E + ++ ++ E+G+ ++ + + D+ ++++ + E
Sbjct: 422 GDRTARLWDVETGQCILK---LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE 478
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKC 400
+ G H ++ + S+ + K+++ L T + SA IK
Sbjct: 479 R----LEG-HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSA----IK---- 525
Query: 401 PEGKFIQNLPGHNAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQ 451
PEG GH + S+ V+ + +SG+ + +M FWD +TG ++ Q
Sbjct: 526 PEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQ 577
Score = 127 (49.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/146 (26%), Positives = 64/146 (43%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-AT-----------GK 252
W L + GH V +A P + +GS DK IKVW+L AT G
Sbjct: 470 WSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI 529
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT 312
K + TGH V + VSP + S DR+++ WDL+ ++ + ++ + S+
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLT--CQGHKNSVISVC 587
Query: 313 FDNSGSRLITTEADKTVKLYKEDDSA 338
F G + + D +++ D ++
Sbjct: 588 FSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 72 (30.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
V TI+ P L+T D ++WD+ T+ Y +GH I S+
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSL 408
Score = 62 (26.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 18/85 (21%), Positives = 38/85 (44%)
Query: 26 IRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
+R+ + GH + ++ +++ D TAR+WDV T + L N + ++
Sbjct: 394 VRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE-NGVTAIAIS 452
Query: 85 ASEPQVGTKTVLLESCERIMFVLGT 109
++ + + L+ R+ V GT
Sbjct: 453 PNDQFIAVGS--LDQIIRVWSVSGT 475
Score = 41 (19.5 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 49 ITAGRDSTARVWDVRTKANVYTL 71
+ G + A V+DV+T ++TL
Sbjct: 328 LATGCNQAANVFDVQTGKKLFTL 350
Score = 37 (18.1 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1 VWDLATGK--LKLSLTGHVGSV 20
+WD+ TG+ LKL + V ++
Sbjct: 428 LWDVETGQCILKLEIENGVTAI 449
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 60/242 (24%), Positives = 109/242 (45%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L+R H G VR + P F + D IKVW L T K +LTGH+ VR +
Sbjct: 46 LHR-FEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFH 104
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTV 329
P++ S DD+T++ W+ + K + + + + F + +++ D+T+
Sbjct: 105 RELPWIISASDDQTIRIWNWQNRK---EIACLTGHNHFVMCAQFHPTDDLIVSASLDETI 161
Query: 330 KLYKEDDSATEESHPVI-TGSHDCTI----RLWDLAAGKSLCT--LTNHKKSVRSVALHP 382
+++ D S + H T S + + L D + G + L H + V + HP
Sbjct: 162 RIW--DISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHP 219
Query: 383 TLYMFASASPDN-IKQWKCPEGKF--IQNLPGHNAIINSICVN-NEGVLVSGADNGTMCF 438
TL + S S D +K W+ K + GH ++S+ + ++ +++S ++ T+
Sbjct: 220 TLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRV 279
Query: 439 WD 440
WD
Sbjct: 280 WD 281
Score = 164 (62.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 62/240 (25%), Positives = 96/240 (40%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
LY ++GHL +VR V W + S D+ I++W+ K LTGH V
Sbjct: 88 LY-TLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFH 146
Query: 271 PRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P + S D T++ WD+ K PG+ E + + GS D V
Sbjct: 147 PTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSL-----GDCVV 201
Query: 330 KLYKEDDSAT---EESHP----VITGSHDCTIRLWDLAAGKS--LCTLTNHKKSVRSVAL 380
K E + HP +++GS D ++LW ++A K+ + T H +V SV
Sbjct: 202 KFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIF 261
Query: 381 HPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA-DNGTMCF 438
HP + S D ++ W + ++ N I + L A D+G M F
Sbjct: 262 HPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVF 321
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 45/154 (29%), Positives = 66/154 (42%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
+A P W I++WD G L H G VRGL P P S GDD T
Sbjct: 17 IAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYT 76
Query: 285 VKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY-----KEDDSA 338
+K W L+ NK G +D +F F +I+ D+T++++ KE
Sbjct: 77 IKVWSLDTNKCLYTLTGHLDYVRTVF---FHRELPWIISASDDQTIRIWNWQNRKEIACL 133
Query: 339 TEESH--------P----VITGSHDCTIRLWDLA 360
T +H P +++ S D TIR+WD++
Sbjct: 134 TGHNHFVMCAQFHPTDDLIVSASLDETIRIWDIS 167
Score = 151 (58.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 338 ATEESHP-VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NI 395
A S P V+ TI+LWD G L +H+ VR + HPT +F SA D I
Sbjct: 18 AFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTI 77
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
K W K + L GH + ++ + E ++S +D+ T+ W+W+ R ++ C
Sbjct: 78 KVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQN-----RKEIAC 132
Query: 455 VSG 457
++G
Sbjct: 133 LTG 135
Score = 116 (45.9 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
T++ + H V + HPT + ++AG D T +VW + T +YTLTGH + + +V
Sbjct: 44 TLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFF 103
Query: 84 QASEPQV 90
P +
Sbjct: 104 HRELPWI 110
Score = 94 (38.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH +V C P ++ + S D+ I++WD++ + + S G S +S +
Sbjct: 133 LTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPG-TSSFEE-QMSAQQN 190
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK-----TV 329
L D VK + LE + V S + D+ +L A K T
Sbjct: 191 LLDGSLGDCVVK-FILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTC 249
Query: 330 KLYKED-DSATEESHP--VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
+ + + DS H +I+ D T+R+WDL + +A HP + +
Sbjct: 250 RGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINL 309
Query: 387 FASASPDNIKQWK 399
F +A I +K
Sbjct: 310 FGAAHDSGIMVFK 322
Score = 92 (37.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GHL V T+ H + +I+A D T R+W+ + + + LTGH + +
Sbjct: 93 GHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFV 140
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 196 (74.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 59/172 (34%), Positives = 83/172 (48%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V V P ++ A GS DK+I++W ++G L L GH SV + SP YL S
Sbjct: 432 VTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSL 490
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEE 341
D T+K W+L+ + V P SM E GI TF +++ TV + +
Sbjct: 491 DNTIKLWELQC-VSNVAP-SMYKEGGICKQTFTGHKDFILSV----TV---------SPD 535
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
+I+GS D TI+ W + S TL H SV SVA+ P + FA+ S D
Sbjct: 536 GKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGD 587
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
+VR VA P ++ ATG D+ I++WD+A ++ LTGH + L S L S
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 281 DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE 340
DRTV WD+E A Q + ++ G+ ++ F G + DK ++++ + E
Sbjct: 408 GDRTVCLWDVE---AGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVE 464
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKC 400
+ H G + + GK L + S+ + L ++ +P K+
Sbjct: 465 QLH----GHEESVYSVAFSPDGKYLVS-----GSLDNTIKLWELQCVSNVAPSMYKEG-- 513
Query: 401 PEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFW 439
G Q GH I S+ V+ +G ++SG+ + T+ FW
Sbjct: 514 --GICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 122 (48.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 53/202 (26%), Positives = 87/202 (43%)
Query: 152 TLVFRSLKRT---HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAP 208
TLV S RT D+ Q+L+ T++ + TT + Q A +L W +
Sbjct: 402 TLVSGSGDRTVCLWDVEAGEQKLILHTDDGV--TTVMFSPDGQFIAAGSLDKVIRIWTSS 459
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT------------GKLKLS 256
L + GH V VA P ++ +GS D IK+W+L G K +
Sbjct: 460 GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW--DLEYNKAPVQPGSMDSESGIFSMTFD 314
TGH + +TVSP ++ S DRT++ W D +++ +Q G +S + S+
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQ-GHNNS---VISVAVS 575
Query: 315 NSGSRLITTEADKTVKLYKEDD 336
+G T D +++ +D
Sbjct: 576 PNGHCFATGSGDLRARIWSYED 597
Score = 120 (47.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A ++YR+++GH + + + +GS D+ + +WD+ G+ KL L G
Sbjct: 373 WDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG- 431
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
V + SP ++ + D+ ++ W G E ++S+ F G L++
Sbjct: 432 VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGH---EESVYSVAFSPDGKYLVSG 488
Query: 324 EADKTVKLYK 333
D T+KL++
Sbjct: 489 SLDNTIKLWE 498
Score = 93 (37.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 31/111 (27%), Positives = 49/111 (44%)
Query: 345 VITGSHDCTIRLWDLAAGKS----------LC--TLTNHKKSVRSVALHPTLYMFASASP 392
+++GS D TI+LW+L + +C T T HK + SV + P S S
Sbjct: 485 LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSK 544
Query: 393 DNIKQWKCPEGKFIQ-NLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDW 441
D Q+ P+ Q L GHN + S+ V+ G +G+ + W +
Sbjct: 545 DRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSY 595
Score = 73 (30.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSS---VNTISLHPTIDVLITAGRDSTARVW 60
LATG + ++ +V + + +T+++ V +++ P L T D R+W
Sbjct: 314 LATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIW 373
Query: 61 DVRTKANVYTLTGHTNTIASV 81
D+ K LTGH I S+
Sbjct: 374 DIAQKRVYRLLTGHEQEIYSL 394
Score = 44 (20.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
+WD+A ++ LTGH + L
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSL 394
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 149 (57.5 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
++R V P + ATG+ DK +KVWD+ T K++ + GH + L S ++ S
Sbjct: 329 YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGS 388
Query: 281 DDRTVKCWDLEYNKAPVQPGSMD--SESGIFSMTFDNSGSRLITTEADKTVKLY 332
D+ K WD+E K G+ + ++G+ S+ G + D V+L+
Sbjct: 389 GDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLW 442
Score = 142 (55.0 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 38/135 (28%), Positives = 64/135 (47%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V VA+ P A GS D I+++WD TG GH+ SV + SP L S
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 282 DRTVKCWDLEYNKAPVQ-PGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
D+++K WDL +++ + + + + S+ F GS LI+ D++V+ + + T
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 340 EESHPVITGSHDCTI 354
H ++ G + I
Sbjct: 538 ---HMMLQGHKNSVI 549
Score = 128 (50.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 37/124 (29%), Positives = 55/124 (44%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA----TGKLKLSLTGHVGSVRGLTVSPR 272
GHL V VA P + A+GS DK +K+WDL+ + + + GH V + SP
Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD 514
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+L S DR+V+ WD + G +S + +NS T D +L
Sbjct: 515 GSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRL 574
Query: 332 YKED 335
+K D
Sbjct: 575 WKYD 578
Score = 122 (48.0 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 37/113 (32%), Positives = 50/113 (44%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCP-- 401
V GS D +RLWD G L H SV SVA P AS S D ++K W
Sbjct: 430 VAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489
Query: 402 --EGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQ 451
+ GH + S+ + +G L+SG+ + ++ FWD R G LQ
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQ 542
Score = 110 (43.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
+GH +V VA P W +GS D+ ++ WD G + L GH SV + +SP++
Sbjct: 500 NGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNS 559
Query: 276 --LFSCGD-DRTVKCW 288
+F+ G D + W
Sbjct: 560 HGVFATGSGDFRSRLW 575
Score = 89 (36.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 300 GSMDSESGIFSMTFDNSGSRLITT-EADKTVKLYKEDDSATEESHPVITGSHDCTIRLWD 358
GS+D ++ ++ S SR T K L + + + +I+GS D +++ WD
Sbjct: 475 GSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL---SVAFSPDGSWLISGSKDRSVQFWD 531
Query: 359 LAAGKSLCTLTNHKKSVRSVALHP---TLYMFASASPD-NIKQWK 399
G + L HK SV SVAL P + +FA+ S D + WK
Sbjct: 532 PRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 77 (32.2 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P + L T D T +VWD+ TK +T GH I S+
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSL 375
Score = 76 (31.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV---RTKANVY-TLTGHTNTIASV 81
+ Y GHL SV +++ P L + D + ++WD+ R+++ T GH + + SV
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Score = 63 (27.2 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 1 VWDLATGKLKLSLTGH-VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGR-DSTAR 58
+WD+ GK +L VG G+T ++++ P L+ AG D+ R
Sbjct: 395 IWDIEKGKCAFTLGNEEVGPKNGVT-------------SVAMSPD-GRLVAAGSLDNIVR 440
Query: 59 VWDVRTKANVYTLTGHTNTIASV 81
+WD +T + GH +++ SV
Sbjct: 441 LWDAQTGYFLERYEGHLDSVYSV 463
Score = 57 (25.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 26 IRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL----TGHTNTIAS 80
I+H ++GH + ++ +++ D A++WD+ +TL G N + S
Sbjct: 361 IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTS 420
Query: 81 V 81
V
Sbjct: 421 V 421
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 152 (58.6 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 43/134 (32%), Positives = 62/134 (46%)
Query: 166 ISCQELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS--GHLGWV 222
++ + V T++ L V +A N QI+ ++ K + + W+ I GH WV
Sbjct: 96 LTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL----WNTLGVCKYTIQDEGHTEWV 151
Query: 223 RCVAVEPG--NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
CV P N + DK++KVW+LA KLK + GH G + +TVSP S G
Sbjct: 152 SCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 211
Query: 281 DDRTVKCWDLEYNK 294
D WDL K
Sbjct: 212 KDGQAMLWDLNEGK 225
Score = 114 (45.2 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH +V V + ++ +G+ D +++WDL TG GH V + S
Sbjct: 57 RSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSAD 116
Query: 273 HPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+ + S D+T+K W+ L K +Q + ++S +++ DK VK+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKV 176
Query: 332 YKEDDSATEESHPVITG 348
+ + + +H TG
Sbjct: 177 WNLANCKLKTNHIGHTG 193
Score = 112 (44.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 215 ISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLAT-----GKLKLSLTGHVGSVRGLT 268
+ GH GWV +A P + + S DK I +W L G + SL GH V +
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+S + S D T++ WDL + + + S+ F ++++ DKT
Sbjct: 71 ISSDGQFALSGAWDGTLRLWDLTTGLTTRR--FVGHTKDVLSVAFSADNRQIVSGSRDKT 128
Query: 329 VKLY 332
+KL+
Sbjct: 129 IKLW 132
Score = 110 (43.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/115 (27%), Positives = 49/115 (42%)
Query: 341 ESHPVITGSHDCTIRLWD-LAAGKSLCTLTNHKKSVRSVALHPTLY--MFASASPDN-IK 396
++ +++GS D TI+LW+ L K H + V V P + S D +K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVK 175
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRL 450
W K N GH +N++ V+ +G L SG +G WD G + L
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Score = 101 (40.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 30/89 (33%), Positives = 40/89 (44%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-TGHVG 262
W+ A KL GH G++ V V P A+G D +WDL GK +L +G V
Sbjct: 177 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV- 235
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
+ L SP Y ++K WDLE
Sbjct: 236 -INALCFSPNR-YWLCAATGPSIKIWDLE 262
Score = 87 (35.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 25/101 (24%), Positives = 44/101 (43%)
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WK 399
S+P+I D +++W+LA K H + +V + P + AS D W
Sbjct: 161 SNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
EGK + L + +IN++C + + A ++ WD
Sbjct: 221 LNEGKHLYTLDSGD-VINALCFSPNRYWLCAATGPSIKIWD 260
Score = 80 (33.2 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFI 406
+G D LWDL GK L TL + + ++ P Y +A+ +IK W EGK I
Sbjct: 209 SGGKDGQAMLWDLNEGKHLYTLDSGDV-INALCFSPNRYWLCAATGPSIKIWDL-EGKII 266
Score = 77 (32.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V+ + + ++ D T R+WD+ T GHT + SV A
Sbjct: 57 RSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSAD 116
Query: 87 EPQV 90
Q+
Sbjct: 117 NRQI 120
Score = 64 (27.6 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV-RTKANV----YTLTG 73
+VRG ++ + G ++ + T +P D++++A RD + +W + R + N +L G
Sbjct: 6 TVRG--TLKGHSGWVTQIATTPKYP--DMILSASRDKSIIMWKLTRDETNYGIPQRSLKG 61
Query: 74 HTNTIASVV 82
H++ ++ VV
Sbjct: 62 HSHFVSDVV 70
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 160 (61.4 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 46/149 (30%), Positives = 72/149 (48%)
Query: 170 ELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS--GHLGWVRCVA 226
+ V T + L V + N Q++ ++ K + + W+ I+ GH WV CV
Sbjct: 100 QFVGHTSDVLSVSISPDNRQVVSGSRDKTIKI----WNIIGNCKYTITDGGHSDWVSCVR 155
Query: 227 VEPG--NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
P N F + DK +KVWDL T L+ S GH G V +T+SP S G D T
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGT 215
Query: 285 VKCWDLEYNKAPVQPGSMDSESGIFSMTF 313
+ WDL N++ S+++++ I ++ F
Sbjct: 216 LMLWDL--NES-THLYSLEAKANINALVF 241
Score = 143 (55.4 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 211 LYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLAT-----GKLKLSLTGHVGSV 264
L + GH GWV ++ P N + +GS DK I +W+L G + LTGH V
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
+S Y S D+T++ WDLE + Q + S + S++ ++++
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQ--FVGHTSDVLSVSISPDNRQVVSGS 124
Query: 325 ADKTVKLY 332
DKT+K++
Sbjct: 125 RDKTIKIW 132
Score = 134 (52.2 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 40/139 (28%), Positives = 67/139 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH +V A+ + + + S DK I++WDL G+ GH V +++SP
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPD 116
Query: 273 HPYLFSCGDDRTVKCWDLEYN-KAPVQPGS-MDSESGI-FSMTFDNSGSRLITTEADKTV 329
+ + S D+T+K W++ N K + G D S + FS DN ++ DK V
Sbjct: 117 NRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNL--TFVSAGWDKAV 174
Query: 330 KLYKEDDSATEESHPVITG 348
K++ + + SH TG
Sbjct: 175 KVWDLETFSLRTSHYGHTG 193
Score = 117 (46.2 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN--HKKSVRSVAL--HPTLYMFASASP 392
S + ++ V++GS D TI++W++ G T+T+ H V V +P F SA
Sbjct: 112 SISPDNRQVVSGSRDKTIKIWNII-GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGW 170
Query: 393 DN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRL 450
D +K W + GH ++++ ++ +G L SG +GT+ WD + L
Sbjct: 171 DKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL 230
Query: 451 QVR 453
+ +
Sbjct: 231 EAK 233
Score = 101 (40.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH G+V V + P A+G D + +WDL SL ++ L SP Y
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA-NINALVFSPNR-YW 247
Query: 277 FSCGDDRTVKCWDLEYNKAP-------VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+++ +DLE + V G SE S+T+ G L + D +
Sbjct: 248 LCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLI 307
Query: 330 KLYK 333
++++
Sbjct: 308 RVWQ 311
Score = 81 (33.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT--GHTNTIASV 81
GH S V ++S+ P +++ RD T ++W++ YT+T GH++ ++ V
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCK-YTITDGGHSDWVSCV 154
Score = 72 (30.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V+ +L ++A D T R+WD+ + GHT+ + SV
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPD 116
Query: 87 EPQV 90
QV
Sbjct: 117 NRQV 120
Score = 63 (27.2 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIK 396
+G D T+ LWDL L +L K ++ ++ P Y +A+ +I+
Sbjct: 209 SGGRDGTLMLWDLNESTHLYSL-EAKANINALVFSPNRYWLCAATGSSIR 257
Score = 61 (26.5 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 31 GHLSSVNTISLHP-TIDVLITAGRDSTARVWD-VRTKANVYT----LTGHTNTIA 79
GH V ++S P D+L++ RD + +W+ VR N LTGH++ ++
Sbjct: 13 GHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVS 67
Score = 40 (19.1 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 70 TLTGHTNTIASVVTQASEPQV 90
TL GH+ + S+ T P +
Sbjct: 10 TLEGHSGWVTSLSTAPENPDI 30
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 224 (83.9 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 65/238 (27%), Positives = 112/238 (47%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H+G VR V P F +G D IKVW L T K +L GH+ +RG++ P++
Sbjct: 52 HVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWII 111
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDS 337
SC DD+T++ W+ + N+ + + + + S F S +++ D+TV+++ D S
Sbjct: 112 SCSDDQTIRIWNWQ-NRQEIACLTGHNHY-VMSAQFHPSEDLIVSASLDQTVRVW--DIS 167
Query: 338 ATEESHPVITGS----HDCTIRLW----DLAAGKSLCT---LTNHKKSVRSVALHPTLYM 386
+ H T S D R D+ + L H K V + HPTL +
Sbjct: 168 GLRKKHSAPTSSVRAFEDQLQRQQLPQQDIFGNINAVVKYVLEGHDKGVNYASFHPTLPL 227
Query: 387 FASASPDNI-KQWKCPEGKF--IQNLPGHNA-IINSICVNNEGVLVSGADNGTMCFWD 440
SA D + K W+ + K + GH ++++I ++ +++S +D+ T+ WD
Sbjct: 228 IVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWD 285
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 350 HDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQN 408
H TI+LWD G + +H VRSV HPT +F S D IK W K I
Sbjct: 31 HSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFT 90
Query: 409 LPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
L GH I + +++ ++S +D+ T+ W+W+ R ++ C++G
Sbjct: 91 LNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQN-----RQEIACLTG 135
Score = 135 (52.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/154 (26%), Positives = 66/154 (42%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
VA P W I++WD G L HVG VR + P P S GDD T
Sbjct: 17 VAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYT 76
Query: 285 VKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK---EDDSA-- 338
+K W L K G +D G+ +F + +I+ D+T++++ + A
Sbjct: 77 IKVWSLNTRKCIFTLNGHLDYIRGV---SFHHDLPWIISCSDDQTIRIWNWQNRQEIACL 133
Query: 339 --------TEESHP----VITGSHDCTIRLWDLA 360
+ + HP +++ S D T+R+WD++
Sbjct: 134 TGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDIS 167
Score = 131 (51.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 48/195 (24%), Positives = 79/195 (40%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GHL ++R V+ W + S D+ I++W+ + LTGH V P
Sbjct: 91 LNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSED 150
Query: 275 YLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ S D+TV+ WD+ K P S + + + I + VK
Sbjct: 151 LIVSASLDQTVRVWDISGLRKKHSAPTS-SVRAFEDQLQRQQLPQQDIFGNINAVVKYVL 209
Query: 334 E--DDSATEES-HP----VITGSHDCTIRLWDLAAGKS--LCTLTNHKKSVRSVALHPTL 384
E D S HP +++ D ++LW ++ K+ + T H +V S HP
Sbjct: 210 EGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQ 269
Query: 385 YMFASASPDN-IKQW 398
+ S S D I+ W
Sbjct: 270 DLILSVSDDKTIRVW 284
Score = 114 (45.2 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T+I + H+ V ++ HPT + ++ G D T +VW + T+ ++TL GH + I V
Sbjct: 44 TLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGV 101
Score = 113 (44.8 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 42/187 (22%), Positives = 75/187 (40%)
Query: 119 SLLDFGTIRPWQLQIIQE-QCFLN----LQEVQRHSVHTLVFRSLKRTHDMFISCQELVP 173
S D TIR W Q QE C + Q H L+ + + D + ++
Sbjct: 112 SCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLI---VSASLDQTVRVWDISG 168
Query: 174 STENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEW 233
+ PT++ Q + + LP + + V+ GH V + P
Sbjct: 169 LRKKHSAPTSSVRA-FEDQLQRQQLPQQDIFGNINAVVKYVLEGHDKGVNYASFHPTLPL 227
Query: 234 FATGSADKIIKVWDLATGKL-KL-SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
+ D+++K+W ++ K ++ + GH G+V P + S DD+T++ WDL
Sbjct: 228 IVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLN 287
Query: 292 YNKAPVQ 298
+ PV+
Sbjct: 288 -KRVPVK 293
Score = 103 (41.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 25 VIRHY-HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR-TKA-NVYTLTGHTNTIASV 81
V+++ GH VN S HPT+ ++++AG D ++W + TKA V T GHT + S
Sbjct: 204 VVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSA 263
Query: 82 V 82
+
Sbjct: 264 I 264
Score = 71 (30.1 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
+++ S D TIR+WDL + +A HPT+ +FA+ I +K +
Sbjct: 272 ILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISLFAACHDSGIMVFKLERER 331
Query: 405 FIQNLPGHNAIINSIC-VNNE 424
P H N + VN E
Sbjct: 332 -----PAHTIFQNKLYYVNGE 347
Score = 37 (18.1 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 370 NHKKSVRSVALHPTLYMFASA 390
N + V ++ + PT Y F A
Sbjct: 593 NRQGQVETITIDPTEYRFKRA 613
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 177 (67.4 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 59/200 (29%), Positives = 89/200 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ AT S DK IKVW++ + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S DS + F+ +G+ + + +D TVK+
Sbjct: 161 SCSEDKTIKIWDTT-NKQCVNNFS-DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVN 218
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP +IT S D T+++ DL G+ + TL H V +V+
Sbjct: 219 KLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPDN-IKQWK 399
+F+S D + W+
Sbjct: 279 SKGGELFSSGGADTQVLLWR 298
Score = 171 (65.3 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + VG
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ +P + S G D TVK WD+ NK +Q + S G+ ++F SG+ +IT
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKL-LQHYQVHS-GGVNCVSFHPSGNYIITA 246
Query: 324 EADKTVKL 331
+D T+K+
Sbjct: 247 SSDGTLKI 254
Score = 144 (55.7 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 58/243 (23%), Positives = 93/243 (38%)
Query: 201 PKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
P P P L R GH + V P + AT S D + +W+ GH
Sbjct: 1 PLPFQEDP-VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGH 59
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
V + SP L S DRTV+ W + K + + S+ F G L
Sbjct: 60 KDVVTSVQFSPLGNLLASASRDRTVRLWIPD--KRGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 321 ITTEADKTVK---LYKEDD--SATEESH--------P----VITGSHDCTIRLWDLAAGK 363
T DK++K +Y++ S +H P +++ S D TI++WD +
Sbjct: 118 ATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 364 SLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVN 422
+ ++ V +P ASA D+ +K W K +Q+ H+ +N + +
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 423 NEG 425
G
Sbjct: 238 PSG 240
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + +R +++HY H VN +S HP+ + +ITA D T ++ D+ +YTL G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 268
Query: 74 HTNTIASV 81
HT + +V
Sbjct: 269 HTGPVFTV 276
Score = 115 (45.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H G V CV+ P + T S+D +K+ DL G+L +L GH G V TV
Sbjct: 219 KLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPV--FTV 276
Query: 270 S-PRHPYLFSCGD-DRTVKCWDLEYN 293
S + LFS G D V W ++
Sbjct: 277 SFSKGGELFSSGGADTQVLLWRTNFD 302
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D +K+WD+ KL H G V ++ P Y
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
+ + D T+K DL + ++ +G +F+++F G + AD V L++
Sbjct: 243 IITASSDGTLKILDLLEGRLIY---TLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWR 298
Score = 105 (42.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 33/120 (27%), Positives = 48/120 (40%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
T S D +I++W++ + L +L H VR P + S S D IK W +
Sbjct: 119 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQVR-----CVSGFP 459
+ N N + N G ++ A + T+ WD R Q QV CVS P
Sbjct: 179 VNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 347 TGSHDCTIRLW--DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
+ S D T+RLW D GKS H VRSV A+AS D +IK W
Sbjct: 77 SASRDRTVRLWIPD-KRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQ 134
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
+F+ +L H + + +G ++VS +++ T+ WD
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 86 (35.3 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R++ GH +++ ++ P+ L TA D+ +W+ + +A + GH + + SV
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSV 66
Score = 77 (32.2 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVW--DVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W D R K++ + HT + SV
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFK--AHTAPVRSV 108
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L TA D + +VW++ + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N + +P + +AG D T ++WD+R
Sbjct: 179 VNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR 216
Score = 47 (21.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK 65
H V P ++++ D T ++WD K
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 220 (82.5 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 65/220 (29%), Positives = 99/220 (45%)
Query: 238 SADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPV 297
S D + ++ D T L GH G V G++ SP YL S +D T++ W L+ V
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 298 -QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP-- 344
G D++ F F + G +RL T+ + ++++ D HP
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 595
Query: 345 --VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCP 401
V TGS D T+RLWD+ G + T HK + S+A P AS S D + W
Sbjct: 596 NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Query: 402 EGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G I L GH I ++ + +G ++ SG+ + T+ WD
Sbjct: 656 HGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 191 (72.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 53/176 (30%), Positives = 82/176 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGS+D+ +++WD+ G TGH G + L SP
Sbjct: 577 RIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN 636
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L S D V WD+ + + + +G I+++ F G + + D TV+L
Sbjct: 637 GKFLASGSTDGRVLLWDIGHG---LMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRL 693
Query: 332 YKE----DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
+ DD T++ TG H I L D + + L T H KS + LH T
Sbjct: 694 WDVMRAIDDVETDD-FTAATG-H---IHLPDNS--QELLLGTYHSKSTAVIHLHFT 742
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 48/205 (23%), Positives = 83/205 (40%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+++ GH G V V+ P + + S D I++W L T + GH V SP
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 273 HPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
Y S G DR + W + Y + G + + + F + + + T +D+TV+L
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHL---ADVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 332 YKEDDSA-----TEESHPV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ + T P+ +GS D + LWD+ G + L H +
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 375 VRSVALHPTLYMFASASPDN-IKQW 398
+ ++ + AS S DN ++ W
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLW 694
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 55/249 (22%), Positives = 95/249 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V + A G AD ++VW + KL+ V S L +
Sbjct: 420 YTFLNAYQG-LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLR-----KVKSAADLNLID 473
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVK 330
+ DD + D K + + SG ++ ++F + L+++ D T++
Sbjct: 474 KE------SDDVLERIMD---EKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIR 524
Query: 331 L-----------YKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
L YK D + + ++G HD RLW + L H
Sbjct: 525 LWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 584
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGA 431
V HP A+ S D ++ W G ++ GH I+S+ + G L SG+
Sbjct: 585 DVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGS 644
Query: 432 DNGTMCFWD 440
+G + WD
Sbjct: 645 TDGRVLLWD 653
Score = 74 (31.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
HGH V +S P + L+++ D T R+W ++T + GH
Sbjct: 496 HGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGH 540
Score = 48 (22.0 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 25/91 (27%), Positives = 37/91 (40%)
Query: 48 LITAG-RDSTARVWDVRTKA-NVYTLTGHTNTIAS----VVTQASEPQVGTKTVLLESCE 101
LI G DST RVW V K N I V+ + + + +++ +L
Sbjct: 440 LIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHS 499
Query: 102 RIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQ 132
++ + + L S D GTIR W LQ
Sbjct: 500 GPVYGVSFSPDRNYLLSSSED-GTIRLWSLQ 529
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 184 (69.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 41/121 (33%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G D+ I S+TF + + D +V++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDN---ITSLTFSPDSGLIASASMDNSVRV 536
Query: 332 Y 332
+
Sbjct: 537 W 537
Score = 183 (69.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 63/217 (29%), Positives = 96/217 (44%)
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAPVQPGSM--- 302
D A ++K+ L GH G V L SC +D +++ WDL + + G
Sbjct: 329 DNAGTEMKI-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 303 -DSESGIFSMTFDNSGSRLITTEA---DKT--VKLYKED--DSATEESHP----VITGSH 350
D + +S+ F SGS T D+T +++Y D + HP + TGS
Sbjct: 388 WDLDISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 351 DCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
D T+RLW G S+ T H+ V S+A P ASA D +K W G + L
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 410 PGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGY 445
GH I S+ + + G++ S + + ++ WD R Y
Sbjct: 507 RGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543
Score = 161 (61.7 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 35/105 (33%), Positives = 54/105 (51%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ LT SP
Sbjct: 462 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 521
Query: 273 HPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDSESGIFSMTFDN 315
+ S D +V+ WD+ Y AP GS G+++ N
Sbjct: 522 SGLIASASMDNSVRVWDIRNTYCSAPAD-GSSSELVGVYTGQMSN 565
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 57/246 (23%), Positives = 97/246 (39%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
+ P ++ A G + IK+W L + KLK + VS H +C ++
Sbjct: 276 ISPDSKLLAAGFDNSCIKLWSLRSKKLK-------SEPHQVDVSRIH---LACD---ILE 322
Query: 287 CWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATE----- 340
D E + A + + G ++S F S L++ D +++ Y + S T
Sbjct: 323 EEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIR-YWDLGSFTNTVLYQ 381
Query: 341 -ESHPV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMF 387
++PV +GSHD T RLW L H V V HP
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 388 ASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGY 445
A+ S D ++ W +G ++ GH + S+ + G L S ++ + WD +G
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 446 NFQRLQ 451
++ L+
Sbjct: 502 LYKELR 507
Score = 116 (45.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V + + P + +FA+GS D+ ++W T L++ GH+ V + P Y
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNY 440
Query: 276 LFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--- 331
L + D+TV+ W + N + G + S+ F +G L + D+ +KL
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGH---RGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Query: 332 -----YKE----DDSATE-----ESHPVITGSHDCTIRLWDL 359
YKE D+ T +S + + S D ++R+WD+
Sbjct: 498 ASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 105 (42.0 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL+ V+ + HP + L T D T R+W + +V TGH + S+
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Score = 65 (27.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL 248
W A LY+ + GH + + P + A+ S D ++VWD+
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 55 (24.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 23/94 (24%), Positives = 35/94 (37%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P + D TAR+W + GH + V +
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 89 QVGT----KTVLLESCER---IMFVLGTAGFLLS 115
+ T KTV L S ++ + G G +LS
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Score = 51 (23.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
T ++ GH V + L++ D + R WD+ + N GH
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Score = 48 (22.0 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 36 VNTISLHPTIDVLITAGRDSTA-RVWDVRTK---ANVYTLTGHTNTIASVVTQASEPQ-- 89
+NT + P L+ AG D++ ++W +R+K + + + +A + + + +
Sbjct: 271 LNTAEISPD-SKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDD 329
Query: 90 -VGTKTVLLES-CERIM---FVLGTAGFLLSCLPSLLDFGTIRPWQL 131
GT+ +L C + F+ ++G LLSC + +IR W L
Sbjct: 330 NAGTEMKILRGHCGPVYSTRFLADSSG-LLSCSEDM----SIRYWDL 371
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 211 (79.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 65/208 (31%), Positives = 99/208 (47%)
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPV----QPGSM-DSESGIFSM 311
L H G V G T SP + YL SC +D + + W ++ A V G + D G F
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 312 TFDNSG----SRLITTEADKTVKLYKEDDSATE--ESHP----VITGSHDCTIRLWDLAA 361
F + ++L + + ++++ S + HP V+TGS D T RLWD+
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC 420
G S+ H + V +VA+ P + ASA + I W G+ I+ + GH I S+
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 421 VNNEG-VLVSGADNGTMCFWD-WRTGYN 446
+ E VLVSG + T+ WD ++T YN
Sbjct: 555 FSRESTVLVSGGSDCTVRAWDVFKTNYN 582
Score = 153 (58.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
RV +GHL V CV P + + TGS+DK ++WD+ G GH V + ++P
Sbjct: 457 RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD 516
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+ S + + WD+ + ++ +M G I+S++F + L++ +D TV+
Sbjct: 517 GHTMASADSEGLIHLWDIGTGRR-IK--TMRGHRGNIYSLSFSRESTVLVSGGSDCTVRA 573
Query: 332 YKEDDSATEESHPV---ITGS 349
+ D T ++PV +TGS
Sbjct: 574 W--DVFKTNYNNPVSSSLTGS 592
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 55/246 (22%), Positives = 91/246 (36%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS-------------LTGHVGSVRGLT 268
+ C P + A G + I++W + K L L H G V G T
Sbjct: 327 MNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTT 386
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADK 327
SP + YL SC +D + + W ++ A V + +G ++ + F G
Sbjct: 387 FSPDNKYLLSCSEDASARLWSVDTKTALV---AYKGHTGPVWDVAFGPFG---------- 433
Query: 328 TVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP-TLYM 386
H T SHD T +LW L H V V HP + Y+
Sbjct: 434 ---------------HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYV 478
Query: 387 FASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADN-GTMCFWDWRTGY 445
+S + W G ++ GH + ++ + +G ++ AD+ G + WD TG
Sbjct: 479 LTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538
Query: 446 NFQRLQ 451
+ ++
Sbjct: 539 RIKTMR 544
Score = 149 (57.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
RV +GH V VA+ P A+ ++ +I +WD+ TG+ ++ GH G++ L+ S
Sbjct: 499 RVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRE 558
Query: 273 HPYLFSCGDDRTVKCWDL---EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
L S G D TV+ WD+ YN PV S FS +T D+ V
Sbjct: 559 STVLVSGGSDCTVRAWDVFKTNYNN-PVSSSLTGSVVTPFSAKTSTFNEVNWSTSPDQMV 617
Query: 330 KLY 332
LY
Sbjct: 618 ALY 620
Score = 123 (48.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 46/173 (26%), Positives = 77/173 (44%)
Query: 205 WHAPWKLYRVI-SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA-TGKLKLSLTGHVG 262
W K V GH G V VA P +FAT S D+ ++W L++ GH+
Sbjct: 406 WSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRV-FAGHLS 464
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLE-------YN--KAPVQPGSMDSESGIFSMTF 313
V +T P Y+ + D+T + WD+ +N PV ++ + G +
Sbjct: 465 DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAI-APDGHTMASA 523
Query: 314 DNSGSRLI----TTEADKTVKLYKEDD---SATEESHPVITGSHDCTIRLWDL 359
D+ G + T KT++ ++ + S + ES +++G DCT+R WD+
Sbjct: 524 DSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
Score = 118 (46.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 1 VWDLATGKL-------KLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGR 53
VWD+A G T + S + +R + GHLS V+ ++ HP ++T
Sbjct: 424 VWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSS 483
Query: 54 DSTARVWDVRTKANVYTLTGHTNTIASV 81
D T R+WDV +V GHT + +V
Sbjct: 484 DKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Score = 76 (31.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 33/121 (27%), Positives = 48/121 (39%)
Query: 1 VWDLATGKLKLSLTGHV----GSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDST 56
+W + K L + V GSVR L+ H V + P L++ D++
Sbjct: 350 LWSIKADKKSLPKSTSVEDSDGSVRLLS-------HSGPVYGTTFSPDNKYLLSCSEDAS 402
Query: 57 ARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGT----KTVLLESCERIMFVLGTAGF 112
AR+W V TK + GHT + V T +T L SC+ I + AG
Sbjct: 403 ARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGH 462
Query: 113 L 113
L
Sbjct: 463 L 463
Score = 63 (27.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 19/74 (25%), Positives = 28/74 (37%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
SV T + Y GH V ++ P TA D TA++W + GH + +
Sbjct: 407 SVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDV 466
Query: 79 ASVVTQASEPQVGT 92
V + V T
Sbjct: 467 DCVTFHPNSAYVLT 480
Score = 44 (20.5 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 16 HVGSVRGLTVIRHY--HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT-KANVYTLT 72
H+G L + Y H +++N P ++ ++S R+W ++ K ++ T
Sbjct: 305 HLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKST 364
Query: 73 GHTNTIASV-VTQASEPQVGT 92
++ SV + S P GT
Sbjct: 365 SVEDSDGSVRLLSHSGPVYGT 385
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 198 (74.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 50/163 (30%), Positives = 75/163 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G VR L SP
Sbjct: 417 RIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPN 476
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
YL S G+D+ +K WDL + I S+TF S + + D +V+++
Sbjct: 477 GQYLVSAGEDQLLKLWDLA--SGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIW 534
Query: 333 ----KED----DSATEESHPVITGSHDCTIRLWDLAAGKSLCT 367
K + D ++ E V TG + + +A + L T
Sbjct: 535 DIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVT 577
Score = 188 (71.2 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 57/208 (27%), Positives = 96/208 (46%)
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPG------SMD-SESGI 308
L GH G V P L SC +D +++ WDLE + + G +D S +
Sbjct: 335 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL 394
Query: 309 F--SMTFDNSGSRLITTEADKTVKLYKEDDSATE--ESHP----VITGSHDCTIRLWDLA 360
F S ++D++ +RL + + +++Y + + + HP + TGS D T+RLW
Sbjct: 395 FFASASYDHT-ARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ 453
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSI 419
G S+ T H VR +A P SA D + K W G ++L GH I S+
Sbjct: 454 QGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSV 513
Query: 420 CVN-NEGVLVSGADNGTMCFWDWRTGYN 446
+ + V+ S + + ++ WD ++ +N
Sbjct: 514 TFSLDSSVIASASMDNSVRIWDIKSKHN 541
Score = 153 (58.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 54/205 (26%), Positives = 86/205 (41%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V+ GH G V P + + S D I+ WDL + + GH V L +SP
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 273 HPYLFSCGDDRTVKCWDLEYN-KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+ S D T + W + + G + +G+ + F + + L T DKTV+L
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHL---AGVDCVKFHPNSNYLATGSTDKTVRL 449
Query: 332 Y--KEDDSA---TEESHPV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ ++ +S T PV ++ D ++LWDLA+G L H
Sbjct: 450 WSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDD 509
Query: 375 VRSVALHPTLYMFASASPDN-IKQW 398
+ SV + ASAS DN ++ W
Sbjct: 510 ITSVTFSLDSSVIASASMDNSVRIW 534
Score = 64 (27.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
GH V + P L++ D++ R WD+ + N GH
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGH 380
Score = 59 (25.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 25/103 (24%), Positives = 44/103 (42%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTK--ANVYTL-TGHTNTIASVVTQASEPQVGT 92
+NT P +L T +S+ ++W + +K + + + H + I + E + T
Sbjct: 271 LNTAEASPDNKLLATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLINDTLEVDEEDRTAT 330
Query: 93 -KTVLLESCERIMFV--LGTAGFLLSCLPSLLDFGTIRPWQLQ 132
+ VLL C + L + LLSC +IR W L+
Sbjct: 331 ERKVLLGHCGPVYSTRFLPDSSALLSCSEDT----SIRYWDLE 369
Score = 42 (19.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 59 VWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
V D+ T V + +G NT+++ QA +PQ
Sbjct: 39 VQDMATSLAVQSESGCANTVSAAPCQA-DPQ 68
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 184 (69.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 69/240 (28%), Positives = 106/240 (44%)
Query: 214 VISGH----LGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-TGHVGSVRGLT 268
V++GH L CV+ GN TGS DK +++W+ AT K + + TGH G + +
Sbjct: 396 VLAGHKEVVLSLDTCVS-SSGNVLIVTGSKDKTVRLWN-ATSKSCIGVGTGHNGDILAVA 453
Query: 269 VSPRHPYLFSCGD-DRTVKCWDLEYNKAPVQPG-SMDSESGIFSMTFDNSGSRLITTEAD 326
+ + F G DRT+K W L+ G S DSE I N +R + D
Sbjct: 454 FAKKSFSFFVSGSGDRTLKVWSLD--------GISEDSEEPI------NLKTRSVVAAHD 499
Query: 327 KTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
K + + V TGS D T +W L + TL HK+ + SV
Sbjct: 500 KDINSV----AVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQC 555
Query: 387 FASASPDN-IKQWKCPEGKFIQNLPGH-NAIINSICVNNEGVLVS-GADNGTMCFWDWRT 443
+AS D +K W +G ++ GH ++++ + + + VS GAD G + W+ T
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD-GLLKLWNVNT 614
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 67/303 (22%), Positives = 128/303 (42%)
Query: 141 NLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPM 200
NL+EV+ + V T+ + H +E+V S + + +++ N I+ +K K + +
Sbjct: 379 NLEEVRVYDVATMSCSYVLAGH------KEVVLSLDTCV--SSSGNVLIVTGSKDKTVRL 430
Query: 201 PKPQWHAPWK-LYRVISGHLGWVRCVA-VEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
W+A K V +GH G + VA + +F +GS D+ +KVW L G +S
Sbjct: 431 ----WNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL-DG---IS-- 480
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
S + + R D+ + + N + V GS D + I+ +
Sbjct: 481 --EDSEEPINLKTRSVV---AAHDKDINSVAVARNDSLVCTGSEDRTASIWRLP---DLV 532
Query: 319 RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
++T + K +++ + S ++ V+T S D T+++W ++ G L T H SV
Sbjct: 533 HVVTLKGHKR-RIFSVEFSTVDQC--VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRA 589
Query: 379 ALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS-GADNGTM 436
+ F S D + K W + I H + ++ V + +++ G + +
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Query: 437 CFW 439
W
Sbjct: 650 NLW 652
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 321 ITTEADKTVK--LYKEDDSATE-----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
I D +VK + E D+ T + + + H IR+WDL K + + H+
Sbjct: 44 IVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEG 103
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVN---NEGVLVS 429
V +A H + + A+A D + W G GH +++SI + N+ +L+S
Sbjct: 104 PVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILIS 163
Query: 430 GADNGTMCFWDWRTGYNFQRLQVRCVS 456
G+D+ T+ WD N + + +C++
Sbjct: 164 GSDDATVRVWD----LNAKNTEKKCLA 186
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K R GH G V +A AT AD+ + VWD+ G GH G V +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 270 SP--RHPYLFSCGDDRTVKCWDLEYNKAPVQP-GSMDSE-SGIFSMTFDNSGSRLITTEA 325
P L S DD TV+ WDL + M+ S + S+ G L +
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGR 212
Query: 326 DKTVKLYKEDD---SATEESHPVI 346
DK V L+ D AT ++ V+
Sbjct: 213 DKVVNLWDLHDYSCKATVATYEVL 236
Score = 117 (46.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 47/166 (28%), Positives = 78/166 (46%)
Query: 217 GHLGWVRCVAVEPGNEW--FATGSADKIIKVWDLA---TGKLKLSLTG-HVGSVRGLTVS 270
GH G V + P + +GS D ++VWDL T K L++ H +V + +S
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Query: 271 PRHPYLFSCGDDRTVKCWDL-EYN-KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
LFS G D+ V WDL +Y+ KA V + + ++T +SG+ + A
Sbjct: 202 EDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEV-----LEAVTTVSSGTPFASFVASLD 256
Query: 329 VKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
K K+ +S ++ ++ + G +R+W + G S+C L K S
Sbjct: 257 QKKSKKKESDSQATYFITVGERG-VVRIWK-SEG-SIC-LYEQKSS 298
Score = 107 (42.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/139 (20%), Positives = 58/139 (41%)
Query: 205 WHAPWKLYRV-ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W P ++ V + GH + V ++ T S DK +K+W ++ G + GH S
Sbjct: 526 WRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSS 585
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLIT 322
V + SCG D +K W++ ++ + D E ++++ + T
Sbjct: 586 VLRASFITDGTQFVSCGADGLLKLWNVNTSECIA---TYDQHEDKVWALAVGKKTEMIAT 642
Query: 323 TEADKTVKLYKEDDSATEE 341
D + L+ + ++ +E
Sbjct: 643 GGGDAVINLWHDSTASDKE 661
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
V + A D +I + D +K ++ G ++ L +SP LFS G R ++
Sbjct: 27 VSSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIR 85
Query: 287 CWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
WDLE K ++ E + M SG L T AD+ V ++ D
Sbjct: 86 VWDLETLKC-IRSWK-GHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Score = 84 (34.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + L IR + GH V ++ H + +L TAG D VWDV + GH
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKG 145
Query: 77 TIASVV 82
++S++
Sbjct: 146 VVSSIL 151
Score = 81 (33.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTID--VLITAGRDSTARVWDVRTK 65
V V G ++ GH V++I HP + +LI+ D+T RVWD+ K
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Score = 79 (32.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 345 VITGSHDCTIRLWDLAAG----KSLCTLTNHKKSVRSVALHPT-LYMFASASPDNIKQW 398
+I+GS D T+R+WDL A K L + H +V S+AL L +F++ + W
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 74 (31.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
G ++ ++L P +L +AG RVWD+ T + + GH + + AS
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V+D+AT L GH V L +SS + +++T +D T R+W
Sbjct: 385 VYDVATMSCSYVLAGHKEVVLSLDTC------VSSSGNV-------LIVTGSKDKTVRLW 431
Query: 61 DVRTKANVYTLTGHTNTIASV 81
+ +K+ + TGH I +V
Sbjct: 432 NATSKSCIGVGTGHNGDILAV 452
Score = 65 (27.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRT---KANV--YTLTGHTNTIASVVTQAS 86
H S+V +I+L L +AGRD +WD+ KA V Y + T++S AS
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFAS 250
Score = 54 (24.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 58 RVWDVRTKANVYTLTGHTNTIASVVTQAS 86
RV+DV T + Y L GH + S+ T S
Sbjct: 384 RVYDVATMSCSYVLAGHKEVVLSLDTCVS 412
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 211 (79.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 77/251 (30%), Positives = 113/251 (45%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SG L ++R V P ++ ATG+ DK I+VWD+AT +K +GH + L + Y
Sbjct: 314 SGDL-YIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRY 372
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
+ S D+TV+ WD+ K +++++ ++ +TT A LY
Sbjct: 373 IASGSGDKTVRLWDIAEGKL------------VYTLSIEDG----VTTVAMSPDGLY--- 413
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN---HKKSVRSVALHPTLYMFASASP 392
V GS D T+R+WD G + L N HK SV SVA P S S
Sbjct: 414 ---------VAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSL 464
Query: 393 DN-IKQWKC--PE---------GKFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFW 439
D IK W+ P GK + GH + S+C+ +G V SG+ + + FW
Sbjct: 465 DKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW 524
Query: 440 DWRTGYNFQRL 450
D TG N Q +
Sbjct: 525 DPITG-NAQMM 534
Score = 189 (71.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 63/200 (31%), Positives = 89/200 (44%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT---GH 260
W A KL +S G V VA+ P + A GS DK ++VWD TG L L GH
Sbjct: 385 WDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGH 443
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
SV + +P L S D+T+K W+L P Q + + G TF+ +
Sbjct: 444 KDSVYSVAFAPNGKELVSGSLDKTIKLWELNL---PRQQYNSAGKGGKCHRTFEGHKDFV 500
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
++ T + H V++GS D ++ WD G + L HK SV SVA
Sbjct: 501 LSV-------------CLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAP 547
Query: 381 HPTLYMFASASPD-NIKQWK 399
PT +FA+ S D + W+
Sbjct: 548 SPTGNLFATGSGDMRARIWR 567
Score = 175 (66.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 62/231 (26%), Positives = 102/231 (44%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ SGH + + + A+GS DK +++WD+A GKL +L+ G V + +SP
Sbjct: 353 IFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDG 411
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLITTEADKTVKLY 332
Y+ + D+TV+ WD + + D + ++S+ F +G L++ DKT+KL+
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Query: 333 KEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASP 392
E + ++ + G GK T HK V SV L P + S S
Sbjct: 472 -ELNLPRQQYNSAGKG-------------GKCHRTFEGHKDFVLSVCLTPDGHWVMSGSK 517
Query: 393 DN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWR 442
D ++ W G L GH + S+ + G L + +G M WR
Sbjct: 518 DRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFA-TGSGDMRARIWR 567
Score = 141 (54.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 38/146 (26%), Positives = 70/146 (47%)
Query: 308 IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCT 367
IF +T + + L DK+ LY + + + TG+ D IR+WD+A
Sbjct: 294 IFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHI 353
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV 426
+ H++ + S+ AS S D ++ W EGK + L + + ++ ++ +G+
Sbjct: 354 FSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDGV-TTVAMSPDGL 412
Query: 427 LVS-GADNGTMCFWDWRTGYNFQRLQ 451
V+ G+ + T+ WD TGY +RL+
Sbjct: 413 YVAAGSLDKTVRVWDTTTGYLVERLE 438
Score = 129 (50.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 198 LPMPKPQWHAPWK---LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
L +P+ Q+++ K +R GH +V V + P W +GS D+ ++ WD TG +
Sbjct: 473 LNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQ 532
Query: 255 LSLTGHVGSVRGLTVSPRHPYLFSCGD-DRTVKCW 288
+ L GH SV + SP LF+ G D + W
Sbjct: 533 MMLQGHKNSVISVAPSPTGN-LFATGSGDMRARIW 566
Score = 68 (29.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P L T D RVWD+ T+ + +GH I S+
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSL 364
Score = 62 (26.9 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 36 VNTISLHPTIDVLITAGR-DSTARVWDVRTKANVYTLT---GHTNTIASV 81
V T+++ P + + AG D T RVWD T V L GH +++ SV
Sbjct: 402 VTTVAMSPD-GLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSV 450
Score = 61 (26.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 26 IRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT 72
I+H + GH + ++ + + D T R+WD+ VYTL+
Sbjct: 350 IKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLS 397
Score = 60 (26.2 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
GH SV +++ P L++ D T ++W++ Y G
Sbjct: 442 GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAG 484
Score = 49 (22.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 21/81 (25%), Positives = 32/81 (39%)
Query: 142 LQEVQ--RHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALP 199
LQE++ R V+ L LK D + L E++ V AS+ + Q +
Sbjct: 71 LQEMEMIRQKVYQLEQAQLKMKQDYEAEIRMLRHELESRGVQPVASHVAVPAQHGGPSQA 130
Query: 200 MPKPQWHAPWKLYRVISGHLG 220
P H P L+ I + G
Sbjct: 131 PPPALGHGPSNLFGGIMANQG 151
Score = 41 (19.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1 VWDLATGKLKLSLT 14
+WD+A GKL +L+
Sbjct: 384 LWDIAEGKLVYTLS 397
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 138 (53.6 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 35/98 (35%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G L TLT H++ V SVA P AS S D + W G
Sbjct: 431 SASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL 490
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 491 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 527
Score = 100 (40.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/163 (22%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 255 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 313
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 314 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 373
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 374 SGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 416
Score = 91 (37.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +++WD+ G +LT H V + SP YL S D+ V W+ +
Sbjct: 430 ASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 489
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + ++ G ++ + +D +V
Sbjct: 490 L-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 521
Score = 91 (37.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 31/140 (22%), Positives = 52/140 (37%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 416
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + + E ++S+ F G L +
Sbjct: 417 GPATSNPNSSIMLASASFDSTVRLWDVERGVC-LHTLTKHQEP-VYSVAFSPDGKYLASG 474
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 475 SFDKCVHIWNTQSGSLVHSY 494
Score = 90 (36.7 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 333 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 392
Query: 291 EYNKA--PVQPGSMDSESGIFSMTFD-----NSGSRLITTEADKTVKLY 332
+ + +Q S + + +S T NS L + D TV+L+
Sbjct: 393 KQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Score = 88 (36.0 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 382 SDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
G + L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 442 DVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 488
Score = 82 (33.9 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ V+ L H+ I ++
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 86 SEPQVGT--KTVLLES 99
+ P +++L S
Sbjct: 416 TGPATSNPNSSIMLAS 431
Score = 78 (32.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 31/134 (23%), Positives = 54/134 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 266 WTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 323
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 324 PALDVDWQNNTTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 381
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 382 SDDMTLKIWSMKQD 395
Score = 77 (32.2 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 177 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 217
Score = 71 (30.1 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT----GKLKLSLT------GH-VG 262
V+ GH V A P ++ A+GS D ++W+L G +L L GH V
Sbjct: 178 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 263 SVRGLTVSPRHP--YLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGS 318
S + +T + L + G D + W + N A ++ G IF++ ++ G+
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA----STLGQHKGPIFALKWNKKGN 293
Query: 319 RLITTEADKTVKLYKEDDSATEESHP 344
+++ DKT ++ ++ P
Sbjct: 294 YILSAGVDKTTIIWDAHTGEAKQQFP 319
Score = 45 (20.9 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 295 ILSAGVDKTTIIWDAHT 311
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 218 (81.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 205 WHAP-WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH G V + GN +GS D+ +KVWD+ +G +L GH +
Sbjct: 1020 WSAVNGKCLRTLVGHTGGVWSSQMS-GNI-IISGSTDRTLKVWDMDSGACVHTLQGHTST 1077
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLIT 322
VR + + + S D T++ WD+E V G + + + + +D G +++
Sbjct: 1078 VRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHL---AAVRCVQYD--GKLIVS 1130
Query: 323 TEADKTVKLY---KEDDSATEESHP------------VITGSHDCTIRLWDLAAGKSLCT 367
D VK++ +++ T + H V++GS D +IR+WD+ G T
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHT 1190
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI-CVN-NEG 425
L H+ + L + + +A +K W G+ +Q L G N +++ C+ N
Sbjct: 1191 LMGHQSLTSGMELRQNILVSGNAD-STVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR 1249
Query: 426 VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
+V+ +D+GT+ WD +TG +F R V SG
Sbjct: 1250 FVVTSSDDGTVKLWDVKTG-DFIRNLVALDSG 1280
Score = 189 (71.6 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 67/263 (25%), Positives = 116/263 (44%)
Query: 205 WHA-PWKLYRVISGHLGWV-RCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W + P + +V+ GH V C+ GN +GS D +KVW GK +L GH G
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFS-GNR-IVSGSDDNTLKVWSAVNGKCLRTLVGHTG 1036
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
V +S + S DRT+K WD++ + A V S + M GS++++
Sbjct: 1037 GVWSSQMSGN--IIISGSTDRTLKVWDMD-SGACVHT-LQGHTSTVRCMHLH--GSKVVS 1090
Query: 323 TEADKTVKLYK-EDDSATE--------------ESHPVITGSHDCTIRLWDLAAGKSLCT 367
D T++++ E S + +++G++D +++W + L T
Sbjct: 1091 GSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHT 1150
Query: 368 LTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVL 427
L H V S+ L++ + + +I+ W G L GH ++ + + + + +L
Sbjct: 1151 LQGHTNRVYSLQFDG-LHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR-QNIL 1208
Query: 428 VSGADNGTMCFWDWRTGYNFQRL 450
VSG + T+ WD TG Q L
Sbjct: 1209 VSGNADSTVKVWDITTGQCLQTL 1231
Score = 52 (23.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+++ D+T +VW + TL GHT + S
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS 1040
Score = 49 (22.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
VW GK +L GH G V
Sbjct: 1019 VWSAVNGKCLRTLVGHTGGV 1038
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 205 (77.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 55/198 (27%), Positives = 92/198 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GHL + V P +W A+ SADK IK+W GK + +L GH + + S
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+ S DD+T+K WD+E K V+ E +F ++F+ + +++ D+ V+++
Sbjct: 102 LICSASDDKTIKIWDVESGKM-VKTLKGHKEY-VFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 335 DDSA-----TEESHPV------------ITGSHDCTIRLWDLAAGKSLCTL-TNHKKSVR 376
+ + S PV ++GS+D T+R+WD G+ L T+ T K V
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVS 219
Query: 377 SVALHPTLYMFASASPDN 394
V P + + DN
Sbjct: 220 FVKFSPNGKFVLAGTLDN 237
Score = 172 (65.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 39/124 (31%), Positives = 71/124 (57%)
Query: 326 DKTVKLYKE---DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
++T++ +KE D + +++S + + S D TI++WD+ +GK + TL HK+ V V+ +P
Sbjct: 81 ERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP 140
Query: 383 TLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWD 440
+ S S D N++ W G+ + + H+ + + N +G LV SG+ +GT+ WD
Sbjct: 141 QSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Query: 441 WRTG 444
TG
Sbjct: 201 TTTG 204
Score = 140 (54.3 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 34/130 (26%), Positives = 64/130 (49%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A K R + GH + +A ++ + S DK IK+WD+ +GK+ +L GH
Sbjct: 73 WGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEY 132
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGS-MDSESGIFSMTFDNSGSRLIT 322
V G++ +P+ + S D V+ WD+ + + D +G+ F+ G+ +++
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVH---FNRDGTLVVS 189
Query: 323 TEADKTVKLY 332
D TV+++
Sbjct: 190 GSYDGTVRIW 199
Score = 138 (53.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D TI++W GK TL HK+ + +A + SAS D IK W GK
Sbjct: 63 SASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKM 122
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
++ L GH + + N + ++VSG+ + + WD TG
Sbjct: 123 VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG 162
Score = 135 (52.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 42/173 (24%), Positives = 77/173 (44%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD---------LEYNKAPVQPGSMD 303
LK +L GH+ S+ + SP +L S D+T+K W LE +K + +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 304 SESGIFSMTFDNSGSRLITTEADKTVKL---YKE---DDSATEESHPVITGSHDCTIRLW 357
+S + D+ ++ E+ K VK +KE S +S+ +++GS D +R+W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 358 DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
D+ G+ ++ H V V + + S S D ++ W G+ + +
Sbjct: 158 DVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210
Score = 124 (48.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/161 (21%), Positives = 73/161 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ + + GH +V V+ P + +GS D+ +++WD+ TG+ ++ H V G+
Sbjct: 121 KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF 180
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ + S D TV+ WD + + D + F + F +G ++ D T+
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSF-VKFSPNGKFVLAGTLDNTL 239
Query: 330 KLYKEDDSATEESHPVITGSHD---CTIRLWDLAAGKSLCT 367
+L+ +++ ++ TG + C + + GK + T
Sbjct: 240 RLWSYNNN--KKCLKTYTGHKNEKYCIFSTFSVTCGKWIVT 278
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
TL H KS+ SV P ASAS D IK W +GKF + L GH I+ I + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 426 VLV-SGADNGTMCFWDWRTG 444
L+ S +D+ T+ WD +G
Sbjct: 101 KLICSASDDKTIKIWDVESG 120
Score = 90 (36.7 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDS 337
S D + V N V G++D+ ++S ++N+ L T K K
Sbjct: 211 STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS--YNNNKKCLKTYTGHKNEKYCIFSTF 268
Query: 338 ATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD---N 394
+ ++TGS D I +++L + + TL H+ V +VA HPT + AS + + +
Sbjct: 269 SVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRS 328
Query: 395 IKQWK 399
+K WK
Sbjct: 329 VKIWK 333
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 210 KLYRVISGHLGWVRCV----AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
K + +GH C+ +V G +W TGS D +I +++L T ++ +L GH V
Sbjct: 249 KCLKTYTGHKNEKYCIFSTFSVTCG-KWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVL 307
Query: 266 GLTVSPRHPYLFSCG--DDRTVKCW 288
+ P + S DR+VK W
Sbjct: 308 TVACHPTENIIASGALEKDRSVKIW 332
Score = 78 (32.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+++ GH V +S +P +++++ D R+WDV T ++ H++ + V
Sbjct: 122 MVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGV 178
Score = 77 (32.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R GH ++ I+ ++ +A D T ++WDV + V TL GH + V
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGV 136
Score = 73 (30.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GHL S++++ P L +A D T ++W TL GH I+ +
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Score = 42 (19.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 69 YTLTGHTNTIASV 81
YTL GH +I+SV
Sbjct: 40 YTLKGHLKSISSV 52
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 134 (52.2 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 426 SASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTL 485
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 486 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 522
Score = 100 (40.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/163 (22%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 250 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 308
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 309 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 368
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 369 SGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 411
Score = 94 (38.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 328 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 387
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLYKED 335
+ + +Q S + + +S T N S ++ A D TV+L+ D
Sbjct: 388 KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVD 439
Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 421 NIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 480
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ V S GIF + ++ G ++ + +D +V
Sbjct: 481 QSGTL-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 516
Score = 89 (36.4 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 377 SDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLW 436
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
G I L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 437 DVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 483
Score = 89 (36.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/140 (21%), Positives = 51/140 (36%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 352 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 411
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD++ + + E ++S+ F G L +
Sbjct: 412 GPGTSNPNSNIMLASASFDSTVRLWDVDRGVC-IHTLTKHQEP-VYSVAFSPDGKYLASG 469
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ S+
Sbjct: 470 SFDKCVHIWNTQSGTLVHSY 489
Score = 81 (33.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ V+ L H+ I ++
Sbjct: 351 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 410
Query: 86 SEP 88
+ P
Sbjct: 411 TGP 413
Score = 78 (32.5 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 31/134 (23%), Positives = 54/134 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 261 WTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 318
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 319 PALDVDWQNNTTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 376
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 377 SDDMTLKIWSMKQD 390
Score = 77 (32.2 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 172 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 212
Score = 73 (30.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/146 (23%), Positives = 63/146 (43%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA----TGKLKLSLT------GH-VG 262
V+ GH V A P ++ A+GS D ++W+L +G +L L GH V
Sbjct: 173 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 263 SVRGLTVSPRHP--YLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGS 318
S + +T + L + G D + W + N A ++ G IF++ ++ G+
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA----STLGQHKGPIFALKWNKKGN 288
Query: 319 RLITTEADKTVKLYKEDDSATEESHP 344
+++ DKT ++ ++ P
Sbjct: 289 YILSAGVDKTTIIWDAHTGEAKQQFP 314
Score = 45 (20.9 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 290 ILSAGVDKTTIIWDAHT 306
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 174 (66.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + VG
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ +P + S G D TVK WD+ NK +Q + S G+ ++F SG+ LIT
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKL-LQHYQVHS-GGVNCVSFHPSGNYLITA 246
Query: 324 EADKTVKL 331
+D T+K+
Sbjct: 247 SSDGTLKI 254
Score = 165 (63.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 57/200 (28%), Positives = 87/200 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ A+ S DK IKVW++ + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S D + F+ +G+ + + +D TVK+
Sbjct: 161 SCSEDKTIKIWDTT-NKQCVNNFS-DFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVN 218
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP +IT S D T+++ DL G+ + TL H V +V+
Sbjct: 219 KLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPD-NIKQWK 399
+F S D + W+
Sbjct: 279 SKGGELFTSGGADAQVLLWR 298
Score = 153 (58.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 55/233 (23%), Positives = 92/233 (39%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + V P + ATGS D + +W L GH + + S
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S DRT++ W + K + + S+ F G L + DK++K
Sbjct: 70 PLGNLLASASRDRTIRLWIPD--KRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 331 ---LYKEDD--SATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+Y++ S +H P +++ S D TI++WD + + ++
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
VA +P ASA D+ +K W K +Q+ H+ +N + + G
Sbjct: 188 FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Score = 122 (48.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ VA P A+ +D +K+WD+ KL H G V ++ P Y
Sbjct: 183 SDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D T+K DL + ++ +G +F+++F G + AD V L++
Sbjct: 243 LITASSDGTLKILDLLEGRLIY---TLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + +R +++HY H VN +S HP+ + LITA D T ++ D+ +YTL G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 74 HTNTIASV 81
HT + +V
Sbjct: 269 HTGPVFTV 276
Score = 115 (45.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H G V CV+ P + T S+D +K+ DL G+L +L GH G V ++
Sbjct: 219 KLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 278
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNK 294
S S G D V W +++
Sbjct: 279 SKGGELFTSGGADAQVLLWRTNFDE 303
Score = 104 (41.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 32/120 (26%), Positives = 48/120 (40%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D +I++W++ + L +L H VR P + S S D IK W +
Sbjct: 119 SASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQVR-----CVSGFP 459
+ N N + N G ++ A + T+ WD R Q QV CVS P
Sbjct: 179 VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Score = 99 (39.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 42/129 (32%), Positives = 59/129 (45%)
Query: 347 TGSHDCTIRLW--DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
+ S D TIRLW D GKS H VRSV ASAS D +IK W
Sbjct: 77 SASRDRTIRLWIPD-KRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ 134
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPS 462
+F+ +L H + + +G ++VS +++ T+ WD N Q CV+ F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT---NKQ-----CVNNFSDFV 186
Query: 463 VFFFFLAFS 471
F F+AF+
Sbjct: 187 GFANFVAFN 195
Score = 86 (35.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R++ GH +++ ++ P L T D+ +W +R +A + GH + I SV
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66
Score = 78 (32.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW--D 61
LATG L + S+R Y GH + ++ P ++L +A RD T R+W D
Sbjct: 33 LATGSWDTFLM--LWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPD 90
Query: 62 VRTKANVYTLTGHTNTIASV 81
R K++ + HT + SV
Sbjct: 91 KRGKSSEFK--AHTAPVRSV 108
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N ++ +P + +AG D T ++WD+R
Sbjct: 179 VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Score = 60 (26.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L +A D + +VW++ + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Score = 51 (23.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKA---NVYTLTGHTNTIA 79
H V P ++++ D T ++WD K N G N +A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA 193
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 182 (69.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 61/229 (26%), Positives = 106/229 (46%)
Query: 213 RVISGHLGWVRCVAVEPGN-----EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
RV++GH W+ C+ EP + + A+ S D I++WD G+ LTGH SV +
Sbjct: 206 RVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCV 265
Query: 268 TVSPRHPYLFSCGDDRTVKCW---D------LEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
L+S DRT+K W D L+ + V ++ ++ + + F+ + +
Sbjct: 266 KWGG-DGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEA 324
Query: 319 RLITTEADKTVKLYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKS-LCTLTNH 371
+ + ++ K+ D + +++GS D T+ LW A K L +T H
Sbjct: 325 TINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGH 384
Query: 372 KKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSI 419
+ + V P + ASAS D +IK W+ GK++ +L GH + + I
Sbjct: 385 QALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI 433
Score = 157 (60.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH + V P A+ S DK IK+W+ TGK SL GHV +V + S
Sbjct: 381 MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSR 440
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T+K WD E K + PG D +F+ + G R+ + DK +++++
Sbjct: 441 LLVSGSSDSTLKVWDAETKKLAIDLPGHADE---VFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 145 (56.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKS-LCTLTNHK 372
D SGS + DK + Y D + +++GS D T+ LW A K L +T H+
Sbjct: 330 DMSGS--LAELKDKAQQRY--DKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQ 385
Query: 373 KSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSG 430
+ V P + ASAS D +IK W+ GK++ +L GH + + I + + +LVSG
Sbjct: 386 ALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSG 445
Query: 431 ADNGTMCFWDWRT 443
+ + T+ WD T
Sbjct: 446 SSDSTLKVWDAET 458
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 50/197 (25%), Positives = 85/197 (43%)
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK--CWDLEYNK 294
G + +I V TGK S +G +VR +S P + G V W + K
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDT-TVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKK 183
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
+ G +S+ ++ N R++T + L E E + + S D +I
Sbjct: 184 --LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 355 RLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNA 414
R+WD G+ LT H +SV V +++S+ IK W+ +G + L GH
Sbjct: 242 RIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAH 301
Query: 415 IINSICVNNEGVLVSGA 431
+N++ ++ + VL +GA
Sbjct: 302 WVNTMALSTDYVLRTGA 318
Score = 118 (46.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRH-- 273
GH WV +A P + A+G + I +WD ATG ++ LTGH + L P H
Sbjct: 167 GHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHIN 226
Query: 274 P---YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P YL S D +++ WD + + G S + + + G L ++ D+T+
Sbjct: 227 PECRYLASASKDGSIRIWDTLMGRCDKILTGHTQS---VTCVKWGGDGL-LYSSSQDRTI 282
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 283 KVWRSQD 289
Score = 116 (45.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 55/245 (22%), Positives = 100/245 (40%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
++++GH V CV G+ + S D+ IKVW G L +L GH V + +S
Sbjct: 253 KILTGHTQSVTCVKWG-GDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTD 311
Query: 273 HPYLFSCGD--DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN--SGSRLIT------ 322
+ + + T+ D+ + A ++ + + + SGS T
Sbjct: 312 YVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRP 371
Query: 323 TEADKTVKLYKEDDSA------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
E K ++ + + ++ + + S D +I+LW+ GK L +L H +V
Sbjct: 372 AEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVY 431
Query: 377 SVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNG 434
+A + S S D+ +K W K +LPGH + + + +G V SG +
Sbjct: 432 QIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDK 491
Query: 435 TMCFW 439
+ W
Sbjct: 492 CLRIW 496
Score = 101 (40.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 347 TGSHDCTIRLWDLAAGKSLC-TLTNHKKSVRSVA---LH--PTLYMFASASPD-NIKQWK 399
+G + I LWD A G + LT H K + + LH P ASAS D +I+ W
Sbjct: 186 SGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD 245
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
G+ + L GH + + +G+L S + + T+ W + G + LQ
Sbjct: 246 TLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQ 297
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 50/206 (24%), Positives = 83/206 (40%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGS---ADKIIKVWDLA--TGKLKLSLTGHVGSVR 265
L R + GH WV +A+ + TG+ A+ I D++ +LK VR
Sbjct: 292 LCRTLQGHAHWVNTMALST-DYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVR 350
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
G P L S DD T+ W +K P++ M + + + +R+I + +
Sbjct: 351 GQ--GPER--LVSGSDDFTLFLWRPAEDKKPLE--RMTGHQALINQVLFSPDTRIIASAS 404
Query: 326 -DKTVKLYKEDD-----------SA------TEESHPVITGSHDCTIRLWDLAAGKSLCT 367
DK++KL++ SA + +S +++GS D T+++WD K
Sbjct: 405 FDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAID 464
Query: 368 LTNHKKSVRSVALHPTLYMFASASPD 393
L H V + P AS D
Sbjct: 465 LPGHADEVFATDWSPDGQRVASGGKD 490
Score = 94 (38.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH V VA P ++ A+GS D ++ WDL+T + + GH V + SP
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 275 YLFSCGDDRTVKCWD 289
L S + + WD
Sbjct: 183 KLASGCKNSQIFLWD 197
Score = 73 (30.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 1 VWDLATG-KLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD ATG ++ LTGH + +T + + ++P L +A +D + R+
Sbjct: 195 LWDPATGNQIGRVLTGHS---KWITCL--------CWEPLHINPECRYLASASKDGSIRI 243
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
WD LTGHT ++ V
Sbjct: 244 WDTLMGRCDKILTGHTQSVTCV 265
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHT---NTIA 79
GH SV + +L ++ +D T +VW + TL GH NT+A
Sbjct: 257 GHTQSVTCVKWGGD-GLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMA 307
Score = 48 (22.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANV-YTLTGHTNTI 78
GH V +I+ P L + ++S +WD T + LTGH+ I
Sbjct: 167 GHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWI 215
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 161 (61.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 166 ISCQELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRC 224
+S + V T++ L V + N QI+ ++ + + + + + GH WV C
Sbjct: 96 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 155
Query: 225 VAVEPGN--EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDD 282
V P + S DK +KVW+L+ KL+ +L GH G V + VSP S G D
Sbjct: 156 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Query: 283 RTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL-ITTEADKTVKLYK-EDDSATE 340
V WDL K S+++ S I ++ F S +R + + +K++ E S E
Sbjct: 216 GVVLLWDLAEGKKLY---SLEANSVIHALCF--SPNRYWLCAATEHGIKIWDLESKSIVE 270
Query: 341 E 341
+
Sbjct: 271 D 271
Score = 122 (48.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/164 (26%), Positives = 68/164 (41%)
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
GS D E ++ + S R + D + D+ +++ S D TI+LW+
Sbjct: 81 GSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN------RQIVSASRDRTIKLWN- 133
Query: 360 AAGKSLCTLTN----HKKSVRSVALHP-TLY-MFASASPDN-IKQWKCPEGKFIQNLPGH 412
G+ T++ H+ V V P TL SAS D +K W K L GH
Sbjct: 134 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH 193
Query: 413 NAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQVRCV 455
++++ V+ +G L SG +G + WD G L+ V
Sbjct: 194 TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Score = 120 (47.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH +V V + ++ +GS D +++WDLA G GH V + S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 273 HPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSR--LITTEADKTV 329
+ + S DRT+K W+ L K + G + + F + + +++ DKTV
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Query: 330 KLY 332
K++
Sbjct: 177 KVW 179
Score = 116 (45.9 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEG 403
+++ S D T+++W+L+ K TL H V +VA+ P + AS D + W EG
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 226
Query: 404 KFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWD 440
K + +L N++I+++C + N L + ++G WD
Sbjct: 227 KKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIK-IWD 262
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 36/116 (31%), Positives = 54/116 (46%)
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
+ ED + + ++GS D +RLWDLAAG S H K V SVA SAS
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS 124
Query: 392 PDN-IKQWKC-PEGKFI--QNLPGHNAIINSICVN-N--EGVLVSGADNGTMCFWD 440
D IK W E K+ + GH ++ + + N + +VS + + T+ W+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/121 (23%), Positives = 51/121 (42%)
Query: 218 HLGWVRCVAVEPGN-EWFATGSADKIIKVW-----DLATGKLKLSLTGHVGSVRGLTVSP 271
H V +A N + + S DK I +W D A G + LTGH V + +S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+ S D ++ WDL + + + + S+ F ++++ D+T+KL
Sbjct: 74 DGQFALSGSWDGELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131
Query: 332 Y 332
+
Sbjct: 132 W 132
Score = 64 (27.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 15/64 (23%), Positives = 23/64 (35%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V + L ++ D R+WD+ + GHT + SV
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 87 EPQV 90
Q+
Sbjct: 117 NRQI 120
Score = 60 (26.2 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 22 GLTVIRHYHGHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVY-----TLTGHT 75
GL + H V I+ D++++A RD + +W + Y LTGH+
Sbjct: 4 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS 63
Query: 76 NTIASVV 82
+ + VV
Sbjct: 64 HFVEDVV 70
Score = 58 (25.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT----GHTNTIASV 81
R + GH V +++ +++A RD T ++W+ + YT++ GH + ++ V
Sbjct: 99 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCV 156
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 136 (52.9 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 430 SASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL 489
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 490 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 526
Score = 100 (40.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/163 (22%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 254 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 312
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 313 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 372
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 373 SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/140 (22%), Positives = 52/140 (37%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + + E ++S+ F G L +
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVC-IHTLTKHQEP-VYSVAFSPDGKYLASG 473
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 474 SFDKCVHIWNTQSGSLVHSY 493
Score = 92 (37.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 425 NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 484
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ V S GIF + ++ G ++ + +D +V
Sbjct: 485 QSGSL-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 91 (37.1 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 332 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 391
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLY 332
+ + +Q S + + +S T N S ++ A D TV+L+
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Score = 89 (36.4 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 381 SDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
G I L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 441 DVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Score = 85 (35.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ A V+ L H+ I ++
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 86 SEP 88
+ P
Sbjct: 415 TGP 417
Score = 78 (32.5 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 31/134 (23%), Positives = 54/134 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 265 WTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 322
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 323 PALDVDWQNNTTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 380
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 381 SDDMTLKIWSMKQD 394
Score = 77 (32.2 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 176 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 216
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT----GKLKLSLT------GH-VG 262
V+ GH V A P ++ A+GS D ++W+L G +L L GH V
Sbjct: 177 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 263 SVRGLTVSPRHP--YLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGS 318
S + +T + L + G D + W + N A ++ G IF++ ++ G+
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA----STLGQHKGPIFALKWNKKGN 292
Query: 319 RLITTEADKTVKLYKEDDSATEESHP 344
+++ DKT ++ ++ P
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFP 318
Score = 45 (20.9 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 294 ILSAGVDKTTIIWDAHT 310
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 136 (52.9 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 430 SASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL 489
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 490 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 526
Score = 100 (40.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/163 (22%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 254 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 312
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 313 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 372
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 373 SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/140 (22%), Positives = 52/140 (37%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + + E ++S+ F G L +
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVC-IHTLTKHQEP-VYSVAFSPDGKYLASG 473
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 474 SFDKCVHIWNTQSGSLVHSY 493
Score = 92 (37.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 425 NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 484
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ V S GIF + ++ G ++ + +D +V
Sbjct: 485 QSGSL-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 91 (37.1 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 332 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 391
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLY 332
+ + +Q S + + +S T N S ++ A D TV+L+
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Score = 89 (36.4 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 381 SDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
G I L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 441 DVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Score = 85 (35.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ A V+ L H+ I ++
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 86 SEP 88
+ P
Sbjct: 415 TGP 417
Score = 78 (32.5 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 31/134 (23%), Positives = 54/134 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 265 WTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 322
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 323 PALDVDWQNNTTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 380
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 381 SDDMTLKIWSMKQD 394
Score = 77 (32.2 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 176 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 216
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT----GKLKLSLT------GH-VG 262
V+ GH V A P ++ A+GS D ++W+L G +L L GH V
Sbjct: 177 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 263 SVRGLTVSPRHP--YLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGS 318
S + +T + L + G D + W + N A ++ G IF++ ++ G+
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA----STLGQHKGPIFALKWNKKGN 292
Query: 319 RLITTEADKTVKLYKEDDSATEESHP 344
+++ DKT ++ ++ P
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFP 318
Score = 45 (20.9 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 294 ILSAGVDKTTIIWDAHT 310
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 216 (81.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YN-----KAPVQP--GSMDSESGI 308
L GH G V G++ SP + YL SC +D+TV+ W L+ Y K QP S G
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 309 FSMTFDNSGS-RLITTEADKTVKLYKE--DDSATEESHP----VITGSHDCTIRLWDLAA 361
+ +T + + RL T+ ++++ +D E HP V TGS D T R+WD+
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHT 632
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIK-QWKCPEGKFIQNLPGH-NAIINSI 419
G + H SV +A+ P AS D I W G+ ++++ GH A + S+
Sbjct: 633 GNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSL 692
Query: 420 CVNNEG-VLVSGADNGTMCFWDWRTGYN 446
+ +G VLVSG + ++ WD + N
Sbjct: 693 AFSRDGTVLVSGCADNSVRVWDVKKNTN 720
Score = 180 (68.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH+ V CV P + + TGS+DK ++WD+ TG GH SV L VSP
Sbjct: 595 RIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPD 654
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+L S G+D + WD+ + ++ + + ++S+ F G+ L++ AD +V+++
Sbjct: 655 GRWLASGGEDGIICVWDIGSGRR-LKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 150 (57.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 343 HPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL-YMFASASPDNIKQWKCP 401
H +T SHD T RLW L H V V HP Y+F +S + W
Sbjct: 572 HYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVH 631
Query: 402 EGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPK 460
G ++ GH +N + V+ +G L SG ++G +C WD +G +RL + + G +
Sbjct: 632 TGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSG---RRL--KSMRGHAR 686
Query: 461 PSVFFFFLAFS 471
S++ LAFS
Sbjct: 687 ASLYS--LAFS 695
Score = 148 (57.2 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 33/88 (37%), Positives = 44/88 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV-GSVRGLTVSP 271
RV GH V C+AV P W A+G D II VWD+ +G+ S+ GH S+ L S
Sbjct: 637 RVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSR 696
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQP 299
L S D +V+ WD++ N P
Sbjct: 697 DGTVLVSGCADNSVRVWDVKKNTNDAGP 724
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 64/299 (21%), Positives = 128/299 (42%)
Query: 117 LPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTE 176
LP L D I+ +Q+ + + L +Q S+ ++ + T++ ++C E + +
Sbjct: 418 LP-LKDANDIKKMIIQVEDSRSKIKLGAIQA-SLPSVCMYTFHNTNNN-MTCIEF--NDD 472
Query: 177 NQLVPTTASNTQI-IQQAKAKALP-MPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWF 234
+ LV ++ I + K L + K H P + R + GH G V V+ P N++
Sbjct: 473 STLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYL 532
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY-N 293
+ S DK +++W L T +S GH V + SP Y + D+T + W ++
Sbjct: 533 LSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIY 592
Query: 294 KAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDD----------------- 336
+ G ++ + + F + + + T +DKT +++
Sbjct: 593 PLRIFAGHIND---VDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCL 649
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK-SVRSVALHPTLYMFASASPDN 394
+ + + + +G D I +WD+ +G+ L ++ H + S+ S+A + S DN
Sbjct: 650 AVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADN 708
Score = 113 (44.8 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+R + GH++ V+ + HP + + T D T R+WDV T V GHTN++
Sbjct: 594 LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSV 646
Score = 74 (31.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH V +S P L++ D T R+W + T + + GHT + V
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDV 565
Score = 74 (31.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 19/68 (27%), Positives = 27/68 (39%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S+ T + Y GH V + P +TA D TAR+W + G
Sbjct: 540 TVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAG 599
Query: 74 HTNTIASV 81
H N + V
Sbjct: 600 HINDVDCV 607
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 151 (58.2 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 51/181 (28%), Positives = 83/181 (45%)
Query: 169 QELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS---GHLGWVRC 224
+ V T++ L V + N QI+ ++ + + + W+ + IS GH WV C
Sbjct: 99 RRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL----WNTLGECKYTISEGDGHKEWVSC 154
Query: 225 VAVEPGN--EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDD 282
V P + S DK +KVW+L KL+ SL GH G + + VSP S G D
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKD 214
Query: 283 RTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL-ITTEADKTVKLYK-EDDSATE 340
+ WDL K S+++ S I S+ F S +R + + +++++ E S E
Sbjct: 215 GVILLWDLAEGKKLY---SLEAGSIIHSLCF--SPNRYWLCAATENSIRIWDLESKSVVE 269
Query: 341 E 341
+
Sbjct: 270 D 270
Score = 133 (51.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
GS D E ++ + + R + D + D+ +++ S D TI+LW+
Sbjct: 81 GSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDN------RQIVSASRDRTIKLWN- 133
Query: 360 AAGKSLCTLTN---HKKSVRSVALHP-TLY-MFASASPDN-IKQWKCPEGKFIQNLPGHN 413
G+ T++ HK+ V V P TL SAS D +K W K +L GH+
Sbjct: 134 TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHS 193
Query: 414 AIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQ 451
+N++ V+ +G L SG +G + WD G L+
Sbjct: 194 GYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 126 (49.4 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 34/123 (27%), Positives = 59/123 (47%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH +V V + ++ +GS D +++WDLATG+ GH V + S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 273 HPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSG--SRLITTEADKTV 329
+ + S DRT+K W+ L K + G E + + F + +++ DKTV
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKE-WVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 330 KLY 332
K++
Sbjct: 176 KVW 178
Score = 108 (43.1 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+++ S D T+++W+L K +L H + +VA+ P + AS D I W EG
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
K + +L +II+S+C + + A ++ WD
Sbjct: 226 KKLYSLEA-GSIIHSLCFSPNRYWLCAATENSIRIWD 261
Score = 106 (42.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
+ ED + + ++GS D +RLWDLA G++ H K V SVA SAS
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 392 PDN-IKQWKC-PEGKF-IQNLPGHNAIINSICVN-NEGV--LVSGADNGTMCFWD 440
D IK W E K+ I GH ++ + + N V +VS + + T+ W+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 94 (38.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 29/125 (23%), Positives = 53/125 (42%)
Query: 214 VISGHLGWVRCVAVEPGN-EWFATGSADKIIKVW-----DLATGKLKLSLTGHVGSVRGL 267
++ H V +A N + T S DK I +W D + G + LTGH V +
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
+S + S D ++ WDL + + + + S+ F ++++ D+
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRR--FVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 328 TVKLY 332
T+KL+
Sbjct: 128 TIKLW 132
Score = 68 (29.0 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 16/64 (25%), Positives = 23/64 (35%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V + L ++ D R+WD+ T GHT + SV
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 87 EPQV 90
Q+
Sbjct: 117 NRQI 120
Score = 59 (25.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 22 GLTVIRHYHGHLSSVNTISLH-PTIDVLITAGRDSTARVWDVRTKANVY-----TLTGHT 75
GL + H V I+ D+++TA RD + +W + Y LTGH+
Sbjct: 4 GLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHS 63
Query: 76 NTIASVV 82
+ + VV
Sbjct: 64 HFVEDVV 70
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 188 (71.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 438 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 497
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G D+ I S+TF S + + D +V++
Sbjct: 498 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRV 554
Query: 332 Y 332
+
Sbjct: 555 W 555
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 63/217 (29%), Positives = 95/217 (43%)
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAPVQPGSM--- 302
D A ++K+ L GH G V L SC +D +++ WDL + + G
Sbjct: 347 DNAGTEMKI-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 405
Query: 303 -DSESGIFSMTFDNSGSRLITTEA---DKT--VKLYKED--DSATEESHP----VITGSH 350
D + +S+ F SGS T D+T +++Y D + HP + TGS
Sbjct: 406 WDLDISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 464
Query: 351 DCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
D T+RLW G S+ T H+ V S+A P ASA D +K W G + L
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 524
Query: 410 PGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTGY 445
GH I S+ + + L++ A + ++ WD R Y
Sbjct: 525 RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTY 561
Score = 157 (60.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ LT SP
Sbjct: 480 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 539
Query: 273 HPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDSESGIFSMTFDN 315
+ S D +V+ WD+ Y P GS G+++ N
Sbjct: 540 SSLIASASMDNSVRVWDIRNTYCSTPAD-GSSGELVGVYTGQMSN 583
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 57/246 (23%), Positives = 97/246 (39%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
+ P ++ A G + IK+W L + KLK + VS H +C ++
Sbjct: 294 ISPDSKLLAAGFDNSCIKLWSLRSKKLK-------SEPHQVDVSRIH---LACD---ILE 340
Query: 287 CWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATE----- 340
D E + A + + G ++S F S L++ D +++ Y + S T
Sbjct: 341 EEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIR-YWDLGSFTNTVLYQ 399
Query: 341 -ESHPV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMF 387
++PV +GSHD T RLW L H V V HP
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 459
Query: 388 ASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGY 445
A+ S D ++ W +G ++ GH + S+ + G L S ++ + WD +G
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 519
Query: 446 NFQRLQ 451
++ L+
Sbjct: 520 LYKELR 525
Score = 117 (46.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V + + P + +FA+GS D+ ++W T L++ GH+ V + P Y
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNY 458
Query: 276 LFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--- 331
L + D+TV+ W + N + G + S+ F +G L + D+ +KL
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGH---RGPVLSLAFSPNGKYLASAGEDQRLKLWDL 515
Query: 332 -----YKE----DDSATE-----ESHPVITGSHDCTIRLWDL 359
YKE D+ T +S + + S D ++R+WD+
Sbjct: 516 ASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 105 (42.0 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL+ V+ + HP + L T D T R+W + +V TGH + S+
Sbjct: 437 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 492
Score = 71 (30.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A LY+ + GH + + P + A+ S D ++VWD+ G G
Sbjct: 513 WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGE 572
Query: 264 VRGL 267
+ G+
Sbjct: 573 LVGV 576
Score = 55 (24.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 23/94 (24%), Positives = 35/94 (37%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P + D TAR+W + GH + V +
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 457
Query: 89 QVGT----KTVLLESCER---IMFVLGTAGFLLS 115
+ T KTV L S ++ + G G +LS
Sbjct: 458 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 491
Score = 51 (23.0 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
T ++ GH V + L++ D + R WD+ + N GH
Sbjct: 351 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 401
Score = 48 (22.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 36 VNTISLHPTIDVLITAGRDSTA-RVWDVRTK---ANVYTLTGHTNTIASVVTQASEPQ-- 89
+NT + P L+ AG D++ ++W +R+K + + + +A + + + +
Sbjct: 289 LNTAEISPD-SKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDD 347
Query: 90 -VGTKTVLLES-CERIM---FVLGTAGFLLSCLPSLLDFGTIRPWQL 131
GT+ +L C + F+ ++G LLSC + +IR W L
Sbjct: 348 NAGTEMKILRGHCGPVYSTRFLADSSG-LLSCSEDM----SIRYWDL 389
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 167 (63.8 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH V + P W +G D ++KVWDL GKL H G ++ L P H +L
Sbjct: 141 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP-HEFL 199
Query: 277 FSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
+ G D+TVK WDLE + + G ++ +G+ +TF+ G ++
Sbjct: 200 LATGSADKTVKFWDLETFEL-IGSGGTET-TGVRCLTFNPDGKSVL 243
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/209 (24%), Positives = 88/209 (42%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
+KL ++ H V C+ + + TG D + +W + LSL GH + +
Sbjct: 7 YKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
T + + T+K WDLE +A V S S+ F G + D
Sbjct: 66 TFDASEGLVAAGAASGTIKLWDLE--EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 328 TVKLY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+K++ K+ T + H P +++G D +++WDL AGK L +
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQW 398
H+ ++S+ HP ++ A+ S D +K W
Sbjct: 184 HEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/113 (34%), Positives = 55/113 (48%)
Query: 336 DSATEESHP--VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
DS T ++ V G+ TI+LWDL K + TLT H+ + SV HP FAS S D
Sbjct: 63 DSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLD 122
Query: 394 -NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
N+K W + I GH +N + +G +VSG ++ + WD G
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAG 175
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 48/187 (25%), Positives = 78/187 (41%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR-HPY 275
GH + V + A G+A IK+WDL K+ +LTGH R VS HP+
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH----RSNCVSVNFHPF 112
Query: 276 --LFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL- 331
F+ G D +K WD+ K + + G+ + F G +++ D VK+
Sbjct: 113 GEFFASGSLDTNLKIWDIR-KKGCIHTYKGHTR-GVNVLRFTPDGRWIVSGGEDNVVKVW 170
Query: 332 ----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
+K + + + HP + TGS D T++ WDL + + + V
Sbjct: 171 DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGV 230
Query: 376 RSVALHP 382
R + +P
Sbjct: 231 RCLTFNP 237
Score = 98 (39.6 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
V+R GH S+ +++ HP + + D+ ++WD+R K ++T GHT +
Sbjct: 93 VVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 97 (39.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL H G ++ + P ATGSADK +K WDL T +L S VR LT
Sbjct: 176 KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTF 235
Query: 270 SPRHPYLFSCGDDRTVKCWDLE 291
+P + CG ++K + E
Sbjct: 236 NPDGKSVL-CGLQESLKIFSWE 256
Score = 85 (35.0 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 26 IRHYHGHLSSVNTISL-HPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++ + H ++VN + + + VL+T G D +W + + +L GH++ I SV
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 85 ASEPQVG----TKTVLLESCERIMFVLGTAGFLLSCL 117
ASE V + T+ L E V G +C+
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCV 105
Score = 81 (33.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
+GH S +++++ + + L+ AG S T ++WD+ V TLTGH + SV
Sbjct: 56 YGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSV 107
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 192 (72.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 381 RIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 440
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 441 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 497
Query: 332 YKE----DDSATEESHPVITGSH 350
+ +D T+ S ++ G++
Sbjct: 498 WDAVKAFEDLETDNSQELLLGTY 520
Score = 178 (67.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 280 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 338
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 339 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 398
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 399 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Query: 401 PEGKFIQNLPGHNAIINSICVNNEGVLVS 429
G + L GH + S+ + +G +++
Sbjct: 459 GHGLMVGELKGHTDTVCSLRFSRDGEILA 487
Score = 143 (55.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
S+ V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 399 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 459 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 136 (52.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 52/240 (21%), Positives = 91/240 (37%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + + V V + A G AD ++VW + KL+ V L++
Sbjct: 223 YTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAADLSLID 277
Query: 272 RHP--YLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+ L D++T + Y + PV S + + ++ RL + +
Sbjct: 278 KESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC 337
Query: 329 VKLYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ YK D + + ++G HD RLW + L H V HP
Sbjct: 338 LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 397
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 398 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 457
Score = 131 (51.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 49/205 (23%), Positives = 82/205 (40%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+++ GH G V + P + + S D +++W L T + GH V SP
Sbjct: 297 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 356
Query: 273 HPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
Y S G DR + W + Y + G + + + F + + + T AD+TV+L
Sbjct: 357 GYYFVSGGHDRVARLWATDHYQPLRIFAGHL---ADVNCTRFHPNSNYVATGSADRTVRL 413
Query: 332 YKEDDSA-----TEESHPV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ + T P+ TG+ D + LWD+ G + L H +
Sbjct: 414 WDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 473
Query: 375 VRSVALHPTLYMFASASPDN-IKQW 398
V S+ + AS S DN ++ W
Sbjct: 474 VCSLRFSRDGEILASGSMDNTVRLW 498
Score = 65 (27.9 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 300 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 344
Score = 51 (23.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 326 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 385
Query: 74 H 74
H
Sbjct: 386 H 386
Score = 46 (21.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 48 LITAG-RDSTARVWDVRTK 65
LI G DST RVW V K
Sbjct: 244 LIAGGFADSTVRVWSVTPK 262
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 282 DVLERIMDEKTASELKILYGHSGPV 306
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 184 (69.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 420 RIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPN 479
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G D+ I S+TF S + + D +V++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRV 536
Query: 332 Y 332
+
Sbjct: 537 W 537
Score = 173 (66.0 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 58/216 (26%), Positives = 94/216 (43%)
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSM--- 302
D A ++K+ L GH G V L SC +D +++ WDL + + G
Sbjct: 329 DSAGTEMKI-LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 303 -DSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP----VITGSHD 351
D + S+ F ++ +RL + + +++Y D + HP + TGS D
Sbjct: 388 WDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTD 447
Query: 352 CTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLP 410
T+RLW G S+ T H+ V ++A P ASA D +K W G + L
Sbjct: 448 KTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 507
Query: 411 GHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTGY 445
GH I S+ + + L++ A + ++ WD R Y
Sbjct: 508 GHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTY 543
Score = 161 (61.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ LT SP
Sbjct: 462 RLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 521
Query: 273 HPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDSESGIFS 310
+ S D +V+ WD+ Y AP GS G+++
Sbjct: 522 SSLIASASMDNSVRVWDIRNTYCNAPAD-GSSSELVGVYT 560
Score = 99 (39.9 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL V+ + HP + L T D T R+W + +V TGH + ++
Sbjct: 419 LRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLAL 474
Score = 67 (28.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL 248
W A LY+ + GH + + P + A+ S D ++VWD+
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 58 (25.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
T ++ GH V + L++ D + R WD+R+ N GH
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGH 383
Score = 58 (25.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 22/87 (25%), Positives = 33/87 (37%)
Query: 20 VRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIA 79
+R T Y GH V + + P +A D TAR+W + GH +
Sbjct: 371 LRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVD 430
Query: 80 SVVTQASEPQVGT----KTVLLESCER 102
V + + T KTV L S ++
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQ 457
Score = 52 (23.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 36 VNTISLHPTIDVLITAGRD-STARVWDVRTK---ANVYTLTGHTNTIASVVTQASEPQ-- 89
+NT + P L+ AG D S ++W +R+K + + + +A + E +
Sbjct: 271 LNTAEISPN-SKLLAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDD 329
Query: 90 -VGTKTVLLES-CERIM---FVLGTAGFLLSCLPSLLDFGTIRPWQLQ 132
GT+ +L C + F+ ++G LLSC + +IR W L+
Sbjct: 330 SAGTEMKILRGHCGPVYSTRFLSDSSG-LLSCSEDM----SIRYWDLR 372
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 187 (70.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G D+ I S+TF S + + D +V++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDN---ITSLTFSPDSSLIASASMDNSVRV 536
Query: 332 Y 332
+
Sbjct: 537 W 537
Score = 176 (67.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 62/214 (28%), Positives = 95/214 (44%)
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAPVQPGSM--- 302
D+ T ++K+ L GH G V L SC +D +++ WDL + + G
Sbjct: 330 DVGT-EMKV-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 303 -DSESGIFSMTFDNSGSRLITTEA---DKT--VKLYKED--DSATEESHP----VITGSH 350
D + +S+ F SGS T D+T +++Y D + HP + TGS
Sbjct: 388 WDVDISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 351 DCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
D T+RLW G S+ T H+ V S+A P ASA D +K W G + L
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 506
Query: 410 PGHNAIINSICVNNEGVLVSGAD-NGTMCFWDWR 442
GH I S+ + + L++ A + ++ WD R
Sbjct: 507 RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 156 (60.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ LT SP
Sbjct: 462 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPD 521
Query: 273 HPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDSESGIFSMTFDN 315
+ S D +V+ WD+ + AP GS G+++ N
Sbjct: 522 SSLIASASMDNSVRVWDIRNTHCSAPTD-GSSSELVGVYTGQMSN 565
Score = 126 (49.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+GSHD T RLW L H V V HP A+ S D ++ W +G
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 460
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
++ GH + S+ + G L S ++ + WD +G F+ L+
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Score = 116 (45.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V V + P + +FA+GS D+ ++W T L++ GH+ V + P Y
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNY 440
Query: 276 LFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--- 331
L + D+TV+ W + N + G + S+ F +G L + D+ +KL
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGH---RGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Query: 332 -----YKE----DDSATE-----ESHPVITGSHDCTIRLWDL 359
+KE D+ T +S + + S D ++R+WD+
Sbjct: 498 ASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 105 (42.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL+ V+ + HP + L T D T R+W + +V TGH + S+
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Score = 63 (27.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL 248
W A L++ + GH + + P + A+ S D ++VWD+
Sbjct: 495 WDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 56 (24.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 23/94 (24%), Positives = 35/94 (37%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P + D TAR+W + GH + V +
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 89 QVGT----KTVLLESCER---IMFVLGTAGFLLS 115
+ T KTV L S ++ + G G +LS
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Score = 52 (23.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T ++ GH V + L++ D + R WD+ + N GH + V
Sbjct: 333 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Score = 51 (23.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLK 254
+ P ++ A G + IK+W L + KLK
Sbjct: 276 ISPESKLLAAGFDNSCIKLWSLRSKKLK 303
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 36 VNTISLHPTIDVLITAGRDSTA-RVWDVRTKA---NVYTLTGHTNTIASVVTQASEPQ-- 89
+NT + P L+ AG D++ ++W +R+K + + +A + + + +
Sbjct: 271 LNTAEISPE-SKLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACDILEEEDDEDD 329
Query: 90 -VGTKTVLLES-CERIM---FVLGTAGFLLSCLPSLLDFGTIRPWQL 131
VGT+ +L C + F+ ++G LLSC + +IR W L
Sbjct: 330 DVGTEMKVLRGHCGPVYSTRFLADSSG-LLSCSEDM----SIRYWDL 371
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 181 (68.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 61/200 (30%), Positives = 89/200 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ AT S DK IKVW + + SL H VR SP +
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S DS + F+ SG+ + + +D+TVK+
Sbjct: 119 SCSEDKTIKIWDTT-NKQCVNNFS-DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 176
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP +IT S D T+++ DL G+ + TL H V +V+
Sbjct: 177 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Query: 381 HPTLYMFASASPDN-IKQWK 399
+FAS D + W+
Sbjct: 237 SKGGELFASGGADTQVLLWR 256
Score = 172 (65.6 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + VG
Sbjct: 87 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 146
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ +P + S G D+TVK WD+ NK +Q + S G+ ++F SG+ LIT
Sbjct: 147 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL-LQHYQVHS-GGVNCISFHPSGNYLITA 204
Query: 324 EADKTVKL 331
+D T+K+
Sbjct: 205 SSDGTLKI 212
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V VR +++HY H VN IS HP+ + LITA D T ++ D+ +YTL G
Sbjct: 167 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 226
Query: 74 HTNTIASV 81
HT + +V
Sbjct: 227 HTGPVFTV 234
Score = 119 (46.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D+ +KVWD+ KL H G V ++ P Y
Sbjct: 141 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 200
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D T+K DL + ++ +G +F+++F G + AD V L++
Sbjct: 201 LITASSDGTLKILDLLEGRLIY---TLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 256
Score = 114 (45.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + H G V C++ P + T S+D +K+ DL G+L +L GH G V ++
Sbjct: 177 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNK 294
S S G D V W +++
Sbjct: 237 SKGGELFASGGADTQVLLWRTNFDE 261
Score = 102 (41.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/120 (26%), Positives = 47/120 (39%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
T S D +I++W + + L +L H VR P + S S D IK W +
Sbjct: 77 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 136
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQVR-----CVSGFP 459
+ N N + N G ++ A + T+ WD R Q QV C+S P
Sbjct: 137 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP 196
Score = 73 (30.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W + HT + SV
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 66
Score = 67 (28.6 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N + +P+ + +AG D T +VWDVR
Sbjct: 137 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Score = 63 (27.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L TA D + +VW + + +Y+L HT+ +
Sbjct: 56 FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWV 105
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK 65
H V P ++++ D T ++WD K
Sbjct: 101 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Score = 46 (21.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 59 VWDVRTKANVYTLTGHTNTIASV 81
+W+ + A Y GH + + SV
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSV 24
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 168 (64.2 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH V + P W +G D I+KVWDL GKL H G ++ L P H +L
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP-HEFL 199
Query: 277 FSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ G DRTVK WDLE + + G ++ +G+ ++F+ G + + +++K++
Sbjct: 200 LATGSADRTVKFWDLETFEL-IGSGGPET-AGVRCLSFNPDG-KTVLCGLQESLKIF 253
Score = 157 (60.3 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 210 KLYRVISGHLGWVRCVAVE--PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
K+ R ++GH C++V+ P E+FA+GS D +K+WD+ + GH V L
Sbjct: 92 KIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
+P ++ S G+D VK WDL K + S + + I S+ F L T AD+
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ--IQSLDFHPHEFLLATGSADR 207
Query: 328 TVKLY 332
TVK +
Sbjct: 208 TVKFW 212
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 39/113 (34%), Positives = 56/113 (49%)
Query: 336 DSATEESHPVIT--GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
DS T ++ V+ G+ TI+LWDL K + TLT H+ + SV HP FAS S D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 394 -NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
N+K W + I GH +N + +G +VSG ++ + WD G
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
Score = 121 (47.7 bits), Expect = 0.00070, P = 0.00070
Identities = 43/183 (23%), Positives = 75/183 (40%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH + V + A G+A IK+WDL K+ +LTGH + + P +
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 277 FSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL----- 331
S D +K WD+ K + + G+ + F G +++ D VK+
Sbjct: 117 ASGSLDTNLKIWDIR-KKGCIHTYKGHTR-GVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 332 ------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
+K + + + HP + TGS D T++ WDL + + + VR ++
Sbjct: 175 GKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLS 234
Query: 380 LHP 382
+P
Sbjct: 235 FNP 237
Score = 116 (45.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKF 405
+GS D +++WD+ + T H + V + P S DNI K W GK
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 406 IQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRT 443
+ H I S+ + +E +L +G+ + T+ FWD T
Sbjct: 178 LTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Score = 96 (38.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
++R GH S+ ++ HP + + D+ ++WD+R K ++T GHT +
Sbjct: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 92 (37.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 26/82 (31%), Positives = 38/82 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL H G ++ + P ATGSAD+ +K WDL T +L S VR L+
Sbjct: 176 KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235
Query: 270 SPRHPYLFSCGDDRTVKCWDLE 291
+P + CG ++K + E
Sbjct: 236 NPDGKTVL-CGLQESLKIFSWE 256
Score = 88 (36.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 26 IRHYHGHLSSVNTISL-HPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++ + H ++VN + + + VL+T G D +W + + +L GH++ I SV
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 85 ASEPQVG----TKTVLLESCERIMFVLGTAGFLLSCLPSLLDF 123
ASE V + T+ L E V G +C+ +DF
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS--VDF 109
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 147 (56.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 57/235 (24%), Positives = 96/235 (40%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE--- 291
ATGS D ++W G+L +L H G + L + Y+ S G D+T WD
Sbjct: 426 ATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQ 484
Query: 292 ------YNKAPVQPGSMDSESGIFSMTFDNS--GSRLITTEADKTVKLYKEDDSATE--- 340
++ AP + S + D RL E KT K + + +A +
Sbjct: 485 CTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCP 544
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASAS 391
+ + + S D T+++W + + L H K + ++ PT + ASAS
Sbjct: 545 QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASAS 604
Query: 392 PDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
D+ ++ W G I L H + S+ + +G L SG+ + + W +TG
Sbjct: 605 FDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTG 659
Score = 132 (51.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H + V SVA P AS S D + W G+
Sbjct: 602 SASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQL 661
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N++G V + A +G++ D R
Sbjct: 662 VHSYKGTGGIFE-VCWNSKGTKVGASASDGSVFVLDLR 698
Score = 99 (39.9 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 32/109 (29%), Positives = 51/109 (46%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N+ FA+ S D+ I V L + + GH V + P+ L SC DD T+K W +
Sbjct: 504 NQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM 563
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLY 332
++ +Q S + + +S T +N + LI A D TV+L+
Sbjct: 564 NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLW 612
Score = 95 (38.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +++WD+ G +LT H V + SP +L S D+ V W + +
Sbjct: 601 ASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQ 660
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + +++ G+++ + +D +V
Sbjct: 661 L-VH--SYKGTGGIFEVCWNSKGTKVGASASDGSV 692
Score = 92 (37.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 30/129 (23%), Positives = 51/129 (39%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + P + A+ S D +K+W + + L H + + SP
Sbjct: 528 KTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPT 587
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + + +E ++S+ F G L +
Sbjct: 588 GPGTNNPNTNLILASASFDSTVRLWDVERGSC-IHTLTKHTEP-VYSVAFSPDGKHLASG 645
Query: 324 EADKTVKLY 332
DK V ++
Sbjct: 646 SFDKCVHIW 654
Score = 75 (31.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
R GH S V + +P+ D+L + DSTAR+WD+ + AN
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDM-SDAN 388
Score = 72 (30.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I P +L + D T ++W + + L H+ I ++
Sbjct: 527 IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSP 586
Query: 86 SEP 88
+ P
Sbjct: 587 TGP 589
Score = 44 (20.5 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 466 ILSAGVDKTTIIWDAST 482
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 150 (57.9 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 141
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 142 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 183
Score = 141 (54.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 34/92 (36%), Positives = 45/92 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ R + GH + + P E+ A+GS D IK+WD+ GH +VR L
Sbjct: 100 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 159
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PG 300
SP +L S DD TVK WDL K + PG
Sbjct: 160 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 191
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH-PTLYMFASASPDNIKQWKCPEGKF 405
TG DC + LW + + +LT H V SV L+ P + A + +I+ W K
Sbjct: 42 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI 101
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWRT-G----YNFQRLQVRCVSGFP 459
++ L GH A I S+ + G V SG+ + + WD R G Y VRC+ P
Sbjct: 102 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 161
Score = 126 (49.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH V V + E GS I+VWDL K+ +L GH ++ L P
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 122
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
++ S D +K WD+ K V S++ + + F G L + D TVKL+
Sbjct: 123 FVASGSQDTNIKLWDIR-RKGCVFRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 178
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 40/157 (25%), Positives = 70/157 (44%)
Query: 280 GDDRTVKCWDLEY---------NKAPVQPGSMDSESGIFSMTFDNSGS-RLITTEADKTV 329
GDD V W + + +PV+ +++ + + SGS R+ EA K +
Sbjct: 44 GDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI-VAGSQSGSIRVWDLEAAKIL 102
Query: 330 K--LYKEDDSATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
+ + + + + + HP V +GS D I+LWD+ + H ++VR + P
Sbjct: 103 RTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPD 162
Query: 384 LYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
ASA+ D+ +K W GK + PGH +N +
Sbjct: 163 GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 199
Score = 116 (45.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH VRC+ P +W A+ + D +K+WDL GK+ GH G V + P YL
Sbjct: 149 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 207
Score = 111 (44.1 bits), Expect = 0.00071, P = 0.00071
Identities = 41/167 (24%), Positives = 66/167 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATG D + +W + +SLTGH V + ++ + + +++ WDLE K
Sbjct: 41 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 100
Query: 295 A-PVQPG------SMDSES-GIFSMT-FDNSGSRLITTEADKTVKLYKEDDSATE--ESH 343
G S+D G F + ++ +L V Y+ A
Sbjct: 101 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 160
Query: 344 P----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
P + + + D T++LWDL AGK + H V V HP Y+
Sbjct: 161 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 207
Score = 92 (37.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + ++R GH +++ ++ HP + + + +D+ ++WD+R K V+ GH+
Sbjct: 93 VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 152
Query: 77 TI 78
+
Sbjct: 153 AV 154
Score = 82 (33.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
GH S V ++ L+ T + LI AG S + RVWD+ + TL GH I S+
Sbjct: 65 GHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL 115
Score = 73 (30.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 73
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 200 (75.5 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL--SLTGHVGSVRG 266
WK ++GH + +A + + T S D IKV + +G K +L GH G V
Sbjct: 902 WKCLYTVNGHRKSIESIACN--SNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNC 959
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
+ + + YLFSC D+T+K WDL K + S + + T SG L + D
Sbjct: 960 VVANEK--YLFSCSYDKTIKVWDLSTFK---EIKSFEGVHTKYIKTLALSGRYLFSGGND 1014
Query: 327 KTVKLYKEDDSA---TEESHP--VI----TGSH------DCTIRLWDLAAGKSLCTLTNH 371
+ + ++ + + + H V+ T S+ D I++WDL+ + TL H
Sbjct: 1015 QIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGH 1074
Query: 372 KKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLP-GHNAIINSICV-NNEGVLVS 429
SV S + Y+++ + ++IK W + + +P H+ + + V NN+ ++S
Sbjct: 1075 WNSVSSCVVKDR-YLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ--IIS 1131
Query: 430 GADNGTMCFWDWRT 443
A +G++ W+W++
Sbjct: 1132 AAFDGSIKVWEWQS 1145
Score = 64 (27.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNTIASVVTQAS 86
VN+I+ +L D T RV+DV +YT+ GH +I S+ ++
Sbjct: 872 VNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACNSN 923
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 206 (77.6 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 68/245 (27%), Positives = 115/245 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ + GH G V + +++ +GS+D IKVWDL + +L GH V TV
Sbjct: 496 QTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVH--TVLLN 551
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
YLFS D+T+K WDL+ + +++S + T SG L + DKT+K++
Sbjct: 552 DKYLFSGSSDKTIKVWDLKTLECKY---TLESHARAVK-TLCISGQYLFSGSNDKTIKVW 607
Query: 333 KEDD---SATEESHP--VIT----------GSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
+ T + H V T GS+D TIR+W+L + + TL H + V
Sbjct: 608 DLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEH 667
Query: 378 VALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICV-NNEGVLVSGADNGTM 436
+ + L +F ++ + IK W + L GHNA + + V ++ ++S + + ++
Sbjct: 668 MVICDKL-LFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSI 726
Query: 437 CFWDW 441
W W
Sbjct: 727 RVWGW 731
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 64/252 (25%), Positives = 117/252 (46%)
Query: 210 KLYRVISG-HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL--SLTGHVGSVRG 266
KL I G H+ C+ N F TG +D I+V+D + ++ +L GH G V
Sbjct: 452 KLIETIKGYHVTSHLCIC---DNLLF-TGCSDNSIRVYDYKSQNMECVQTLKGHEGPVES 507
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
+ + + YLFS D ++K WDL+ + D + ++ ++ L + +D
Sbjct: 508 ICYNDQ--YLFSGSSDHSIKVWDLKKLRCIFTLEGHDKP--VHTVLLNDK--YLFSGSSD 561
Query: 327 KTVKLY--KE-DDSATEESHP------------VITGSHDCTIRLWDLAAGKSLCTLTNH 371
KT+K++ K + T ESH + +GS+D TI++WDL + TL H
Sbjct: 562 KTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGH 621
Query: 372 KKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
K V ++ + T +++ + I+ W + L GH+ + + + ++ +L + +
Sbjct: 622 TKWVTTICILGT-NLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDK-LLFTAS 679
Query: 432 DNGTMCFWDWRT 443
D+ T+ WD T
Sbjct: 680 DDNTIKIWDLET 691
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 290 LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK---TVKLYKEDDSATEESHPVI 346
L NK + S+D E + +N I E K T+K Y + +
Sbjct: 417 LNTNKERSKSKSIDLEKP--EILINNKKKESINLETIKLIETIKGYHVTSHLCICDNLLF 474
Query: 347 TGSHDCTIRLWDLAAGKSLC--TLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
TG D +IR++D + C TL H+ V S+ + Y+F+ +S +IK W + +
Sbjct: 475 TGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQ-YLFSGSSDHSIKVWDLKKLR 533
Query: 405 FIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRT 443
I L GH+ ++++ +N++ L SG+ + T+ WD +T
Sbjct: 534 CIFTLEGHDKPVHTVLLNDK-YLFSGSSDKTIKVWDLKT 571
Score = 52 (23.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTI--DVLITAGRDSTARVWD 61
L K K S+ ++ +++ + I+ YH ++ H I ++L T D++ RV+D
Sbjct: 437 LINNKKKESI--NLETIKLIETIKGYH--------VTSHLCICDNLLFTGCSDNSIRVYD 486
Query: 62 VRTKAN--VYTLTGHTNTIASV 81
+++ V TL GH + S+
Sbjct: 487 YKSQNMECVQTLKGHEGPVESI 508
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 164 (62.8 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 51/156 (32%), Positives = 70/156 (44%)
Query: 217 GHLGWVRCVAVEPGN--EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
GH GWV CV P +GS D+ +KVW+L KL+ +L GH G V + VSP
Sbjct: 163 GHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGS 222
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK- 333
S G D WDL K S+D+ S I S+ F + L D ++K++
Sbjct: 223 LCASGGKDGVTLLWDLAEGKRLY---SLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWDL 278
Query: 334 EDDSATEESHPVITGSHD----CTIRLWDLAAGKSL 365
E ++ P I S + CT W A G +L
Sbjct: 279 ESKHIVQDLKPEIPVSKNQMLYCTSLNWS-ADGSTL 313
Score = 149 (57.5 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 46/131 (35%), Positives = 63/131 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV-RGLT 268
KL + GH G+V VAV P A+G D + +WDLA GK SL GS+ L
Sbjct: 200 KLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDA--GSIIHSLC 257
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ------PGSMDSESGIFSMTFDNSGSRLIT 322
SP +L + D ++K WDLE +K VQ P S + S+ + GS L
Sbjct: 258 FSPNRYWLCAATQD-SIKIWDLE-SKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYA 315
Query: 323 TEADKTVKLYK 333
D T+++YK
Sbjct: 316 GYTDGTIRIYK 326
Score = 128 (50.1 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEG 403
+++GS D T+++W+L K C L H V +VA+ P + AS D + W EG
Sbjct: 182 IVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEG 241
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
K + +L +II+S+C + + A ++ WD + + Q L+
Sbjct: 242 KRLYSLDA-GSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLK 288
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 52/193 (26%), Positives = 83/193 (43%)
Query: 259 GHVGSVRGL-TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSG 317
GH V + T P++ S D+++ WDL V G+ SE G+ F
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGV---PF---- 68
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
R +T + + +D + + ++GS D +RLWDL+ G + H K V S
Sbjct: 69 -RRLTGHSH-----FVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLS 122
Query: 378 VALHPTLYMFASASPDN-IKQW----KCPE--GKFIQNLPGHNAIINSICVN-N--EGVL 427
VA SAS D IK W +C G + GHN ++ + + N + +
Sbjct: 123 VAFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTI 182
Query: 428 VSGADNGTMCFWD 440
VSG+ + T+ W+
Sbjct: 183 VSGSWDRTVKVWN 195
Score = 111 (44.1 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
+R ++GH +V+ V + ++ +GS D +++WDL+TG GH V + S
Sbjct: 68 FRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSV 127
Query: 272 RHPYLFSCGDDRTVKCWD 289
+ + S DRT+K W+
Sbjct: 128 DNRQIVSASRDRTIKLWN 145
Score = 84 (34.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSA-DKIIKVWDLAT---------GKLKLS-----LT 258
V+ GH V +A N F S+ DK + VWDL G + LT
Sbjct: 13 VMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
GH V+ + +S + S D ++ WDL + D + + S+ F
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKD--VLSVAFSVDNR 130
Query: 319 RLITTEADKTVKLY 332
++++ D+T+KL+
Sbjct: 131 QIVSASRDRTIKLW 144
Score = 73 (30.8 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 23/90 (25%), Positives = 33/90 (36%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWDL T ++ G S G+ R GH V + L ++ D R+W
Sbjct: 45 VWDL-TNPVQNVGEGAGASEYGVP-FRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 102
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQV 90
D+ T GH + SV Q+
Sbjct: 103 DLSTGVTTRRFVGHDKDVLSVAFSVDNRQI 132
Score = 58 (25.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 22 GLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
G+T R + GH V +++ +++A RD T ++W+ + YT+ G
Sbjct: 107 GVTT-RRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTLGECK-YTIGG 156
Score = 54 (24.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSV--NTISLHPTIDVLITAGRDSTAR 58
+W+ G+ K ++ G +G G ++G +S V + + PTI ++ D T +
Sbjct: 143 LWN-TLGECKYTIGGDLGGGEG------HNGWVSCVRFSPNTFQPTI---VSGSWDRTVK 192
Query: 59 VWDV---RTKANVYTLTGHTNTIA 79
VW++ + + N+ G+ N +A
Sbjct: 193 VWNLTNCKLRCNLEGHGGYVNAVA 216
Score = 51 (23.0 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTID---VLITAGRDSTARVWDV 62
G+ L + HGH V I+ P ID ++++ RD + VWD+
Sbjct: 3 GAQESLVLAGVMHGHNDVVTAIAT-P-IDNSPFIVSSSRDKSLLVWDL 48
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 187 (70.9 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 416 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPN 475
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G D+ I S+TF S + + D +V++
Sbjct: 476 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDN---ITSLTFSPDSSLVASASMDNSVRV 532
Query: 332 Y 332
+
Sbjct: 533 W 533
Score = 173 (66.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 59/216 (27%), Positives = 95/216 (43%)
Query: 247 DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL---------EYNKAPV 297
+L T ++K+ L GH G V L SC +D +++ WDL + + PV
Sbjct: 326 NLGT-EMKV-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 383
Query: 298 QPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED--DSATEESHP----VITGSHD 351
+ S F+ + +RL + + +++Y D + HP + TGS D
Sbjct: 384 WDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 443
Query: 352 CTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLP 410
T+RLW G S+ T H+ V S+A P ASA D +K W G + L
Sbjct: 444 KTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 503
Query: 411 GHNAIINSICVNNEGVLVSGAD-NGTMCFWDWRTGY 445
GH I S+ + + LV+ A + ++ WD R+ +
Sbjct: 504 GHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSH 539
Score = 153 (58.9 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ LT SP
Sbjct: 458 RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 517
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSES-GIFSMTFDN 315
+ S D +V+ WD+ + SE G+++ N
Sbjct: 518 SSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSN 561
Score = 121 (47.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 57/235 (24%), Positives = 89/235 (37%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT-V 285
V P ++ A G + IK+W L + KLK H V + ++ DD
Sbjct: 272 VSPDSKLLAAGFDNSCIKLWSLRSKKLKSE--PHQVDVSRIHLACDFLEEEDDEDDNLGT 329
Query: 286 KCWDLEYNKAPVQPGS-MDSESGIFSMTFDNSGSRLITTEADKTVKLYKE------DDSA 338
+ L + PV + SG+ S + D S TV LY+ D
Sbjct: 330 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDI 388
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
+ S + SHD T RLW L H V V HP A+ S D ++
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
W +G ++ GH + S+ + G L S ++ + WD +G ++ L+
Sbjct: 449 WSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 503
Score = 113 (44.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 42/162 (25%), Positives = 72/162 (44%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V + + P + +FA+ S D+ ++W T L++ GH+ V + P Y
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNY 436
Query: 276 LFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--- 331
L + D+TV+ W + N + G + S+ F +G L + D+ +KL
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGH---RGPVLSLAFSPNGKYLASAGEDQRLKLWDL 493
Query: 332 -----YKE----DDSATE-----ESHPVITGSHDCTIRLWDL 359
YKE D+ T +S V + S D ++R+WD+
Sbjct: 494 ASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Score = 105 (42.0 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL+ V+ + HP + L T D T R+W + +V TGH + S+
Sbjct: 415 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSL 470
Score = 68 (29.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A LY+ + GH + + P + A+ S D ++VWD+ + G
Sbjct: 491 WDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSE 550
Query: 264 VRGL 267
+ G+
Sbjct: 551 LVGV 554
Score = 58 (25.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 24/94 (25%), Positives = 36/94 (38%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P +A D TAR+W + GH + V +
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 435
Query: 89 QVGT----KTVLLESCER---IMFVLGTAGFLLS 115
+ T KTV L S ++ + G G +LS
Sbjct: 436 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS 469
Score = 51 (23.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
T ++ GH V + L++ D + R WD+ + N GH
Sbjct: 329 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 379
Score = 45 (20.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 23 LTVIRHYHGHLSS--VNTISLHPTIDVLITAGRDSTA-RVWDVRTK 65
LT I Y + + +NT + P L+ AG D++ ++W +R+K
Sbjct: 252 LTTIYFYAFYNTEQLLNTAEVSPD-SKLLAAGFDNSCIKLWSLRSK 296
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 205 (77.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 53/181 (29%), Positives = 88/181 (48%)
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
H+ + Y + GH V CV+V P W AT S+D IK+W T +L+ +L GH +
Sbjct: 41 HSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGIS 100
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTE 324
+ + YL S DD+T++ WD E + V+ + + + S+ F+ G+ L++
Sbjct: 101 QVKWATGSKYLASASDDKTIRIWDFE-KRCSVR--CLKGHTNYVSSIDFNPLGTLLVSGS 157
Query: 325 ADKTVKLYKEDDSAT-----EESHPVI------------TGSHDCTIRLWDLAAGKSLCT 367
D+TV+++ D S P+I T S+D R+WD+ +G+ L T
Sbjct: 158 WDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKT 217
Query: 368 L 368
L
Sbjct: 218 L 218
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+ T S D TI++W + CTL H + + V ASAS D I+ W +
Sbjct: 69 IATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKR 128
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
++ L GH ++SI N G +LVSG+ + T+ W+ + G
Sbjct: 129 CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDG 170
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 51/206 (24%), Positives = 94/206 (45%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD-----LEY----NKAPVQPGSMDSES 306
+L GH SV ++VSP ++ + D T+K W LE + + + S
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 307 GIFSMTFDNSGSRLITTEADKTVKLYKEDDS--ATEESHPV----ITGSHDCTIRLWDLA 360
+ D+ R+ E +V+ K + ++ + +P+ ++GS D T+R+W+L
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNL--PGHNAIIN 417
G L L H + + SV++ + A+AS D + + W G+ ++ L P + + N
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSN 228
Query: 418 -SICVNNEGVLVSGADNGTMCFWDWR 442
N + +LVS N + WD+R
Sbjct: 229 LQFTENRKYLLVSNL-NSQIRLWDYR 253
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/203 (25%), Positives = 84/203 (41%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
WKL +++ H V + + + ATG D + +W + +SLTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
++ + + +++ WDLE A + M ++ I S+ F G + + D
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 328 TVKL-----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+KL Y+ A P + + + D T++LWDL AGK +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 371 HKKSVRSVALHPTLYMFASASPD 393
H V V HP Y+ AS S D
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSD 210
Score = 150 (57.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 135 (52.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 280 GDDRTVKCWDLEY---------NKAPVQPGSMDSESGIFSMTFDNSGS-RLITTEADKTV 329
GDD V W + + +PV+ +++ + + SGS R+ EA K +
Sbjct: 40 GDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI-VAGSQSGSIRVWDLEAAKIL 98
Query: 330 K--LYKEDDSATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
+ + + + + + HP V +GS D I+LWD+ + H ++VR + P
Sbjct: 99 RTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPD 158
Query: 384 LYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADN 433
ASA+ D+ +K W GK + PGH +N + + NE +L SG+ +
Sbjct: 159 GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH-PTLYMFASASPDNIKQWKCPEGKF 405
TG DC + LW + + +LT H V SV L+ P + A + +I+ W K
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI 97
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWRT-G----YNFQRLQVRCVSGFP 459
++ L GH A I S+ + G V SG+ + + WD R G Y VRC+ P
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 157
Score = 73 (30.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 62/211 (29%), Positives = 105/211 (49%)
Query: 238 SADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAP 296
SAD +++ D +G++ SL GH G V +P L SC +D T++ W L ++
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 297 VQPGSM----D---SESGIF--SMTFDNSGSRLITTEADKTVKLYKEDDSATE--ESHP- 344
G + D + G + S ++D + +RL T++++ ++++ S + + HP
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKT-ARLWATDSNQALRVFVGHLSDVDCVQFHPN 545
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKC 400
V TGS D T+RLWD G+S+ +T HK SV S+A AS S D NI W
Sbjct: 546 SNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
Query: 401 PEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
G + L H + + +I + +G +++ A
Sbjct: 606 SNGSLVTTLLRHTSTVTTITFSRDGTVLAAA 636
Score = 175 (66.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 49/141 (34%), Positives = 70/141 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
RV GHL V CV P + + ATGS+D+ +++WD TG+ +TGH GSV L S
Sbjct: 528 RVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSAC 587
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
YL S D + WDL N + V + S + ++TF G+ L D + L+
Sbjct: 588 GRYLASGSVDHNIIIWDLS-NGSLVTT-LLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Query: 333 KEDDSATEE---SHPVITGSH 350
+ TE+ +H IT SH
Sbjct: 646 -DFHKVTEDYISNH--ITVSH 663
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 58/209 (27%), Positives = 93/209 (44%)
Query: 213 RVISGHLGWV-RCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
R + GH G V RC A P + S D I++W L T ++ GHV V + +P
Sbjct: 444 RSLMGHTGPVYRC-AFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAP 502
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
Y SC D+T + W + N+A V G + S + + F + + + T +D+TV+
Sbjct: 503 HGYYFVSCSYDKTARLWATDSNQALRVFVGHL---SDVDCVQFHPNSNYVATGSSDRTVR 559
Query: 331 LYKEDDSATEESHPVITG--------------------SHDCTIRLWDLAAGKSLCTLTN 370
L+ D+ T +S ++TG S D I +WDL+ G + TL
Sbjct: 560 LW---DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR 616
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQW 398
H +V ++ + A+A DN + W
Sbjct: 617 HTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/285 (22%), Positives = 116/285 (40%)
Query: 173 PSTENQLVPTTASNTQIIQ----QAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVE 228
PS + +P + ++++ + +K L + K Q + Y V++ H G V C +
Sbjct: 329 PSIDRIPLPELKDSDKLLKLKALREASKRLALSKDQLPSA-VFYTVLNSHQG-VTCAEIS 386
Query: 229 PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCW 288
+ A G D +++W L KL+ +L S+R L + DDR+ +
Sbjct: 387 DDSTMLACGFGDSSVRIWSLTPAKLR-TLKD-ADSLRELDKESADINVRML-DDRSGEVT 443
Query: 289 -DLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE------DDSATEE 341
L + PV + E + ++S RL + V Y+ D
Sbjct: 444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH 503
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
+ ++ S+D T RLW + ++L H V V HP A+ S D ++ W
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
G+ ++ + GH ++S+ + G L SG+ + + WD G
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNG 608
Score = 82 (33.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
V R GH V + P +++L++ DST R+W + T + V T GH + V
Sbjct: 442 VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDV 498
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 168 (64.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 65/251 (25%), Positives = 112/251 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH V A ++ T S DK +K++++ T K+ +L GH V +P+
Sbjct: 115 RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ 174
Query: 273 HPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGI-FSM--TFDNSGS-----RLITT 323
+ S D +V+ WD+ P D S + F+ + SGS R+ T
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 324 EADKTVKLYKEDDS---ATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
+ VK +D++ A + P +++ + D T++LWD GK+L H+ +
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKY 294
Query: 377 SVALHPTLY---MFASASPD-NIKQWKCPEGKFIQNLPGHN-AIINSICVNNEGVLVSGA 431
+ + ++ S S D I W + +Q+L GH A+I S C + ++ SGA
Sbjct: 295 CIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGA 354
Query: 432 ---DNGTMCFW 439
DN T+ W
Sbjct: 355 LEPDN-TIRIW 364
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 54/204 (26%), Positives = 93/204 (45%)
Query: 207 APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
A +KL I GH + V P ++ T SADK +K+W+++ + +LTGH V
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVND 126
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNK-APVQPG--------SMDSESG-IFSMTFDNS 316
S + + DD+T+K +++ K A G + + +S + S +FD S
Sbjct: 127 FAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDES 186
Query: 317 GS--RLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNH 371
+ T KT+ + + SA + + +GS+D +R+WD A G+ + TL +
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 372 KKS-VRSVALHPTLYMFASASPDN 394
+ V V P S++ DN
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDN 270
Score = 143 (55.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 54/219 (24%), Positives = 97/219 (44%)
Query: 252 KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD---------LEYNKAPVQPGSM 302
KL ++ GH S+ + SP +L + D+TVK W+ L +K V +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 303 DSESGIFSMTFDNSGSRLI---TTEADKTVK---LYKEDDSATEESHPVITGSHDCTIRL 356
++S D+ ++ T + KT+K Y + +S V++GS D ++R+
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 357 WDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL-PGHNA 414
WD+ G + TL H V +V+ + + S S D ++ W G+ ++ L N
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENP 249
Query: 415 IINSICVNNEG--VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ + + G +L S DN T+ WD+ G ++ Q
Sbjct: 250 PVAFVKFSPNGKYILSSNLDN-TLKLWDFGKGKTLKQYQ 287
Score = 94 (38.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS--PDN-IKQWK 399
+I+GS DC I +W+L + + +L H ++V + HP M AS + PDN I+ W+
Sbjct: 308 IISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWR 365
Score = 88 (36.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P ++++ D + R+WDVRT V TL H++ +++V
Sbjct: 161 GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAV 211
Score = 84 (34.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 210 KLYRVISGHLGWVRCVAVE---PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
K + GH C+ G +W +GS D I VW+L T ++ SL GH +V
Sbjct: 281 KTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA 340
Query: 267 LTVSPRHPYLFSCG--DDRTVKCW 288
P + S D T++ W
Sbjct: 341 SDCHPMQNMIASGALEPDNTIRIW 364
Score = 80 (33.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 22 GLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
G +I GH S++ + P L T+ D T ++W++ + TLTGH
Sbjct: 68 GYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGH 120
Score = 78 (32.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + ++ L+ R GH VN + ++TA D T ++++V T TL G
Sbjct: 102 TVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKG 161
Query: 74 HTNTI 78
HTN +
Sbjct: 162 HTNYV 166
Score = 72 (30.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 24/120 (20%), Positives = 51/120 (42%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFS 278
V V P ++ + + D +K+WD GK GH + + + ++ S
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIIS 310
Query: 279 CGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT---EADKTVKLYKED 335
+D + W+L+ K VQ S++ + + + +I + E D T+++++ D
Sbjct: 311 GSEDCKIYVWNLQ-TKEVVQ--SLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSD 367
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 68 VYTLTGHTNTIASVVTQASEPQVGT----KTVLLE-----SCERIM 104
+ T+ GHT +I++V +GT KTV + SCER +
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTL 117
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 172 (65.6 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 64/248 (25%), Positives = 106/248 (42%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG----KLKLSLTGHVGSVR 265
+++ V+ GH V + W ATG+ D +++W+L K TGH SV
Sbjct: 355 QVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVT 414
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL----I 321
+ + P L+ N P S + + F N GS+L
Sbjct: 415 AVALGP------------------LDVNGYPTFLASSSQDRTL--KRF-NLGSQLNKSDF 453
Query: 322 TTEADKTVKLYKEDDSATEESHP---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
+ A T+K + D +A + S + + S D TI+LWD + G+ + L H++ V +
Sbjct: 454 SNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWAC 513
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHN-AIINSICVNNEGVLVSGADNGTM 436
+ +P AS S D I+ W + +Q L GH AI+ I ++ +VS A +G +
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLV 573
Query: 437 CFWDWRTG 444
W +G
Sbjct: 574 KVWSLSSG 581
Score = 162 (62.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 85/370 (22%), Positives = 162/370 (43%)
Query: 2 WDLATGK--LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
W LA+G ++ L + S R + V + GH S + ++ PT L++ RD T +V
Sbjct: 160 WVLASGADDSRVRLWD-LNSSRSMAV---FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQV 215
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSC--- 116
W+++ ++ V T+ +++ ++ +P+ E+I++ G +L+
Sbjct: 216 WNIKKRSAVRTIPVF-HSVEAIGWVNGQPE-----------EKILYTAGEGNLILAWDWK 263
Query: 117 LPSLLDFG--TIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTH-DMFISCQELVP 173
S LD G T IIQ F + HS +L+ R KR + FI+ ++L
Sbjct: 264 SGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLR--KRVPGEGFITIKKLNG 321
Query: 174 STENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEW 233
S + + + + + + + + +++ V+ GH V + W
Sbjct: 322 SFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGT---QVFGVLEGHTDIVLTLDSSEDGVW 378
Query: 234 FATGSADKIIKVWDLATG----KLKLSLTGHVGSVRGLTVSPR----HP-YLFSCGDDRT 284
ATG+ D +++W+L K TGH SV + + P +P +L S DRT
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRT 438
Query: 285 VKCWDL--EYNKAPVQPGSMDS----ESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA 338
+K ++L + NK+ ++ + + + ++ G + + DKT+KL+ DS+
Sbjct: 439 LKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLW---DSS 495
Query: 339 TEESHPVITG 348
T E V+ G
Sbjct: 496 TGEVVGVLRG 505
Score = 149 (57.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 38/124 (30%), Positives = 66/124 (53%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP-RHPYLFSCG-DD 282
+ ++P N ATG A+ ++KVWD+A + S GH G + L ++ ++ + G DD
Sbjct: 109 MTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADD 168
Query: 283 RTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEE 341
V+ WDL +++ V G S I +TF+ +GS L++ DKTV+++ +
Sbjct: 169 SRVRLWDLNSSRSMAVFEGH---SSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVR 225
Query: 342 SHPV 345
+ PV
Sbjct: 226 TIPV 229
Score = 136 (52.9 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 40/148 (27%), Positives = 73/148 (49%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
I H V + V A+ S DK IK+WD +TG++ L GH V + +P
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSR 520
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L S DRT++ W+++ + VQ +++ +G I + + + G+++++ AD VK++
Sbjct: 521 QLASGSGDRTIRIWNVDTQQC-VQ--TLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS 577
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAA 361
++ E + D R+W LA+
Sbjct: 578 ---LSSGECVATLDNHED---RVWALAS 599
Score = 130 (50.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 35/128 (27%), Positives = 59/128 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V+ GH V + P + A+GS D+ I++W++ T + +L GH G++ L +
Sbjct: 502 VLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQG 561
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ S D VK W L + + + + FD GS L++ AD V ++K
Sbjct: 562 TQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFD--GSLLVSGGADAVVSVWK 619
Query: 334 EDDSATEE 341
+ TEE
Sbjct: 620 D---VTEE 624
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 41/169 (24%), Positives = 79/169 (46%)
Query: 286 KCWDLEYNKAPVQPG---SMDSESGIF--SMTFDNSGSRLITTEADKTVKLYKEDD---- 336
K ++LE + P+ G + DS I ++T G+R T E ++K EDD
Sbjct: 8 KRFELEKSIEPIYTGGPVAFDSNEKILVTALTDRIIGTRSETGERLFSIKK-DEDDYVTA 66
Query: 337 -SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN- 394
+ T +S +I + ++++ +G+ + ++ H+ V ++ + PT + A+ +
Sbjct: 67 LAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGL 126
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVN---NEGVLVSGADNGTMCFWD 440
+K W + GH +I+++C N VL SGAD+ + WD
Sbjct: 127 VKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Score = 125 (49.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKF 405
+G+ D +RLWDL + +S+ H +R + PT S S D Q W +
Sbjct: 164 SGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSA 223
Query: 406 IQNLPGHNAIINSICVNN---EGVLVSGADNGTMCFWDWRTG 444
++ +P +++ VN E +L + + + WDW++G
Sbjct: 224 VRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSG 265
Score = 119 (46.9 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 217 GHLGWVRCVAV-EPGNEW-FATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
GH G + + + N W A+G+ D +++WDL + + GH +RGLT P
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGS 202
Query: 275 YLFSCGDDRTVKCWDLEYNKA 295
+L S D+TV+ W+++ A
Sbjct: 203 FLLSGSRDKTVQVWNIKKRSA 223
Score = 97 (39.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
S + +GS D TIR+W++ + + TL H ++ + SA+ D +K W
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFW 439
G+ + L H + ++ +G +LVSG + + W
Sbjct: 579 SSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 78 (32.5 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
I+ H + V T+++ PT +L T G + +VWD+ ++ GH I+++
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISAL 151
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/149 (21%), Positives = 67/149 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
+L+ + +V +A+ ++ +++ ++++ +G+ S+ H V +T+
Sbjct: 52 RLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTI 111
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFD-NSGSRLITTEADK 327
P + L + G + VK WD+ A V S G+ S + F + + ++ + AD
Sbjct: 112 DPTNTLLATGGAEGLVKVWDIA--GAYVTH-SFRGHGGVISALCFGKHQNTWVLASGADD 168
Query: 328 T-VKLYKEDDSATEESHPVITGSHDCTIR 355
+ V+L+ D + S V G H IR
Sbjct: 169 SRVRLW---DLNSSRSMAVFEG-HSSVIR 193
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISL--HPTIDVLITAGRDSTARVWD 61
LATG + L V + G V + GH ++ + H VL + DS R+WD
Sbjct: 118 LATGGAE-GLV-KVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 62 VRTKANVYTLTGHTNTI 78
+ + ++ GH++ I
Sbjct: 176 LNSSRSMAVFEGHSSVI 192
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 169 (64.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 209 WKLYRV-----ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +YR + H WVRC P + S DK IK+WD + + + + VG
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ SP + S G D V+ WD+ N+ +Q + S G+ ++F SG+ L+T
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRL-LQHYQVHS-CGVNCLSFHPSGNSLVTA 246
Query: 324 EADKTVKL 331
+D TVK+
Sbjct: 247 SSDGTVKI 254
Score = 156 (60.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 54/200 (27%), Positives = 84/200 (42%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V ++ T S DK IKVW + + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD +K V S DS + F +G+ + + +D V++
Sbjct: 161 SCSEDKTIKIWDTT-SKQCVNNFS-DSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN 218
Query: 332 -----YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP ++T S D T+++ DL G+ + TL H V +V+
Sbjct: 219 RLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPD-NIKQWK 399
+F S D + W+
Sbjct: 279 SKDGELFTSGGADAQVLVWR 298
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 54/233 (23%), Positives = 93/233 (39%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + P + AT S D + +W L GH V L S
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P+ L S D+TV+ W L+ K + + + S+ F G L+T DK++K
Sbjct: 70 PQGNLLASASRDKTVRLWVLD-RKGKSSEFKAHT-APVRSVDFSADGQFLVTASEDKSIK 127
Query: 331 ---LYKEDD--SATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+Y++ S +H P +++ S D TI++WD + + + ++
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V P ASA D+ ++ W + +Q+ H+ +N + + G
Sbjct: 188 FANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG 240
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
+ +R +++HY H VN +S HP+ + L+TA D T ++ D+ +YTL GHT
Sbjct: 212 IWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTG 271
Query: 77 TIASV 81
+ +V
Sbjct: 272 PVFTV 276
Score = 104 (41.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V C++ P T S+D +K+ DL G+L +L GH G V ++ S
Sbjct: 227 HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFT 286
Query: 278 SCGDDRTVKCWDLEYNK 294
S G D V W +N+
Sbjct: 287 SGGADAQVLVWRTSFNQ 303
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 347 TGSHDCTIRLWDL-AAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGK 404
+ S D T+RLW L GKS H VRSV +AS D +IK W +
Sbjct: 77 SASRDKTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQR 135
Query: 405 FIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSV 463
F+ +L H + + +G ++VS +++ T+ WD + +CV+ F
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK--------QCVNNFSDSVG 187
Query: 464 FFFFLAFS 471
F F+ FS
Sbjct: 188 FANFVDFS 195
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D +++WD+ +L H V L+ P
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D TVK DL + ++ +G +F+++F G + AD V +++
Sbjct: 243 LVTASSDGTVKILDLVEGRLIY---TLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Score = 82 (33.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R++ GH +++ + P + TA D+ +W ++ A Y GH + + S+
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Score = 79 (32.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W + K HT + SV
Sbjct: 56 YVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Score = 67 (28.6 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ L+TA D + +VW + + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
Score = 59 (25.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ ++ + N + P + +AG D R+WD+R
Sbjct: 179 VNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 152 (58.6 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV-RGLT 268
KL ++GH G++ VAV P A+G D +I +WDLA GK SL GS+ L
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLC 241
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
SP Y + +++ WDLE +K+ V+ +D ++ GS T +KT
Sbjct: 242 FSPNR-YWLCAATENSIRIWDLE-SKSVVEDLKVDLKAEAEK----TDGS---TGIGNKT 292
Query: 329 VKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
+Y + + + + + +G D IR+W +
Sbjct: 293 KVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 151 (58.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 167 SCQELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS---GHLGWV 222
S + V T++ L V + N QI+ ++ + + + W+ + IS GH WV
Sbjct: 97 STRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL----WNTLGECKYTISEADGHKEWV 152
Query: 223 RCVAVEPGN--EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
CV P + S DK +KVW+L KL+ +L GH G + + VSP S G
Sbjct: 153 SCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGG 212
Query: 281 DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL-ITTEADKTVKLYK-EDDSA 338
D + WDL K S+++ S I S+ F S +R + + +++++ E S
Sbjct: 213 KDGVILLWDLAEGKKLY---SLEAGSIIHSLCF--SPNRYWLCAATENSIRIWDLESKSV 267
Query: 339 TEE 341
E+
Sbjct: 268 VED 270
Score = 136 (52.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 44/159 (27%), Positives = 69/159 (43%)
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
GS D E ++ + S R + D + D+ +++ S D TI+LW+
Sbjct: 81 GSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDN------RQIVSASRDRTIKLWN- 133
Query: 360 AAGKSLCTLTN---HKKSVRSVALHP-TLY-MFASASPDN-IKQWKCPEGKFIQNLPGHN 413
G+ T++ HK+ V V P TL SAS D +K W K L GH+
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHS 193
Query: 414 AIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQ 451
+N++ V+ +G L SG +G + WD G L+
Sbjct: 194 GYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 119 (46.9 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH +V+ V + ++ +GS D +++WDLATG+ GH V + S
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 273 HPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSG--SRLITTEADKTV 329
+ + S DRT+K W+ L K + E + + F + +++ DKTV
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKE-WVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 330 KLY 332
K++
Sbjct: 176 KVW 178
Score = 112 (44.5 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+++ S D T+++W+L K TL H + +VA+ P + AS D I W EG
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
K + +L +II+S+C + + A ++ WD
Sbjct: 226 KKLYSLEA-GSIIHSLCFSPNRYWLCAATENSIRIWD 261
Score = 109 (43.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
+ +D + + ++GS D +RLWDLA G+S H K V SVA SAS
Sbjct: 65 FVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 392 PDN-IKQWKC-PEGKF-IQNLPGHNAIINSICVN-NEGV--LVSGADNGTMCFWD 440
D IK W E K+ I GH ++ + + N V +VS + + T+ W+
Sbjct: 125 RDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 94 (38.1 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 218 HLGWVRCVAVEPGN-EWFATGSADKIIKVW-----DLATGKLKLSLTGHVGSVRGLTVSP 271
H V +A N + T S DK I +W D + G + +TGH V+ + +S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+ S D ++ WDL ++ + + + S+ F ++++ D+T+KL
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRR--FVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 332 Y 332
+
Sbjct: 132 W 132
Score = 69 (29.3 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 16/64 (25%), Positives = 24/64 (37%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V + L ++ D R+WD+ T + GHT + SV
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 87 EPQV 90
Q+
Sbjct: 117 NRQI 120
Score = 67 (28.6 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 31 GHLSSVNTISLHPT--IDVLITAGRDSTARVWDVRTKANVYTLTGHT---NTIA 79
GH V+ + P + +++A D T +VW+++ TL GH+ NT+A
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVA 200
Score = 65 (27.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT---GHT-------- 75
R + GH V +++ +++A RD T ++W+ + YT++ GH
Sbjct: 99 RRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECK-YTISEADGHKEWVSCVRF 157
Query: 76 --NTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFL 113
NT+ + AS + K L++C+ + G +G+L
Sbjct: 158 SPNTLVPTIVSASWDKT-VKVWNLQNCKLRNTLAGHSGYL 196
Score = 56 (24.8 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 46 DVLITAGRDSTARVWDVRTKANVY-----TLTGHTNTIASVV 82
DV++T+ RD + +W + + Y +TGH++ + VV
Sbjct: 29 DVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 134 (52.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G TLT H++ V SVA P AS S D + W G
Sbjct: 480 SASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNL 539
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 540 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 576
Score = 98 (39.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 37/163 (22%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 304 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGE 362
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 363 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 422
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 423 SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPT 465
Score = 95 (38.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 475 NIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 534
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ V S GIF + ++ G ++ + +D +V
Sbjct: 535 QSGNL-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 570
Score = 86 (35.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 382 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 441
Query: 291 E 291
+
Sbjct: 442 K 442
Score = 81 (33.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ + ++ L H I ++
Sbjct: 405 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Query: 86 SEP 88
+ P
Sbjct: 465 TGP 467
Score = 77 (32.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 226 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 266
Score = 75 (31.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 29/129 (22%), Positives = 51/129 (39%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 315 WTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 372
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 373 PALDVDWQNNTTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 430
Query: 324 EADKTVKLY 332
D T+K++
Sbjct: 431 SDDMTLKIW 439
Score = 45 (20.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 344 ILSAGVDKTTIIWDAHT 360
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 169 (64.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 54/232 (23%), Positives = 107/232 (46%)
Query: 228 EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKC 287
+P A+ S D ++WD+ G+ +++ GH +V + +++ DRTVK
Sbjct: 218 DPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKM 276
Query: 288 W---D------LEYNKAPVQPGSMDSE----SGIFSMTFDNSGSRL-ITTEADKTVKLYK 333
W D + V ++ ++ +G F D S S L ++TE + L +
Sbjct: 277 WRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKR 336
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
+E +++ S D T+ LW K + +T H+ V V P + + ASAS D
Sbjct: 337 YQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFD 396
Query: 394 -NIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRT 443
+++ W+ +G+++ GH + ++ + + ++VSG+ + T+ W +T
Sbjct: 397 KSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 448
Score = 131 (51.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH V V P + A+ S DK +++W + G+ + GHV +V + S
Sbjct: 371 MTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSR 430
Query: 275 YLFSCGDDRTVKCWDLEYNK-APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ S D T+K W ++ K A PG D +F + + GSR+ + DK +KL+
Sbjct: 431 LIVSGSKDSTLKVWSVQTKKLAQELPGHADE---VFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 115 (45.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK-LSLTGHVGSVRGLTVSPRH- 273
+GH WV CV+ P + A+G I +WD TG+ K L+GH + L P H
Sbjct: 158 TGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHR 217
Query: 274 -PY---LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P L S D + WD++ + + + + ++ + +G + T+ D+TV
Sbjct: 218 DPECRKLASASGDGDCRIWDVKLGQCLMNIAG--HTNAVTAVRWGGAGL-IYTSSKDRTV 274
Query: 330 KLYKEDD 336
K+++ D
Sbjct: 275 KMWRAAD 281
Score = 113 (44.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 28/85 (32%), Positives = 38/85 (44%)
Query: 205 WHAPWKLYRV-ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A Y GH+ V VA + +GS D +KVW + T KL L GH
Sbjct: 402 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADE 461
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCW 288
V G+ +P + S G D+ +K W
Sbjct: 462 VFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 99 (39.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNE-----WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
R +SGH + C+A EP + A+ S D ++WD+ G+ +++ GH +V +
Sbjct: 198 RPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAV 257
Query: 268 TVSPRHPYLFSCGDDRTVKCW 288
+++ DRTVK W
Sbjct: 258 RWGGAG-LIYTSSKDRTVKMW 277
Score = 82 (33.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH +V +++ P L + D+T R+WD+ T+ +T TGH + V
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCV 167
Score = 79 (32.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 24/82 (29%), Positives = 35/82 (42%)
Query: 1 VWDLATGKLK-LSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD TG+ K L+GH + L YH P L +A D R+
Sbjct: 187 IWDPETGQQKGRPLSGHKKHINCLAW-EPYHRD----------PECRKLASASGDGDCRI 235
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
WDV+ + + GHTN + +V
Sbjct: 236 WDVKLGQCLMNIAGHTNAVTAV 257
Score = 52 (23.4 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 45 IDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
++ L++ D+T +W V +TGH N + V
Sbjct: 345 VESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDV 381
Score = 50 (22.7 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH ++V + ++ T+ +D T ++W T +GH + + ++
Sbjct: 249 GHTNAVTAVRWGGA-GLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNI 298
Score = 37 (18.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 1 VWDLATGKLKLSLTGH 16
+WDL T + TGH
Sbjct: 145 LWDLNTETPHFTCTGH 160
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 134 (52.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G TLT H++ V SVA P AS S D + W G
Sbjct: 472 SASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNL 531
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 532 VHSYRGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 568
Score = 100 (40.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 37/163 (22%), Positives = 68/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 296 ATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGE 354
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ + F+ + + D+ VK ++ + +
Sbjct: 355 AKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 414
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 415 SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPT 457
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 467 NIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 526
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ V S GIF + ++ G ++ + +D +V
Sbjct: 527 QSGNL-VH--SYRGTGGIFEVCWNARGDKVGASASDGSV 562
Score = 85 (35.0 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 374 NMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 433
Query: 291 E 291
+
Sbjct: 434 K 434
Score = 81 (33.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ + ++ L H I ++
Sbjct: 397 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Query: 86 SEP 88
+ P
Sbjct: 457 TGP 459
Score = 77 (32.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 218 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 258
Score = 76 (31.8 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 29/129 (22%), Positives = 51/129 (39%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 307 WTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 364
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L ++ PV+ + + ++ +D SG L +
Sbjct: 365 PALDVDWQNNMTFASCSTDMCIHVCRLGCDR-PVKTFQGHTNE-VNAIKWDPSGMLLASC 422
Query: 324 EADKTVKLY 332
D T+K++
Sbjct: 423 SDDMTLKIW 431
Score = 45 (20.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 336 ILSAGVDKTTIIWDAHT 352
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 197 (74.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA---------PVQPGSMDSES 306
+L GH G+V + SP + YL S +D+TV+ W ++ + A PV S
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 307 GIFSMTFDNSGSRLITTEADKTVKLYKE--DDSATEESHP----VITGSHDCTIRLWDLA 360
F+ + +RL + + ++++ +D HP V TGS D T R+WD++
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGH--NAIIN 417
G S+ H V S+A+ P ++ S D I W GK ++ + GH NAI
Sbjct: 640 TGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY- 698
Query: 418 SICVNNEG-VLVSGADNGTMCFWD 440
S+ + EG VL+SG + T+ WD
Sbjct: 699 SLSYSKEGNVLISGGADHTVRVWD 722
Score = 182 (69.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 42/131 (32%), Positives = 71/131 (54%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSP 271
R+ +GHL V CV+ P + TGS+DK ++WD++TG ++L L GH V + V P
Sbjct: 603 RIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFL-GHTAPVISIAVCP 661
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+L + +D + WD+ K Q ++ I+S+++ G+ LI+ AD TV++
Sbjct: 662 DGRWLSTGSEDGIINVWDIGTGKRLKQMRG-HGKNAIYSLSYSKEGNVLISGGADHTVRV 720
Query: 332 YKEDDSATEES 342
+ + TE S
Sbjct: 721 WDLKKATTEPS 731
Score = 159 (61.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ + GH G V + P N++ +GS DK +++W + T +S GH V ++ SP
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
Y + D+T + W ++ + G ++ + ++F +G + T +DKT ++
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLND---VDCVSFHPNGCYVFTGSSDKTCRM 635
Query: 332 Y--KEDDSAT---EESHPVI------------TGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ DS + PVI TGS D I +WD+ GK L + H K+
Sbjct: 636 WDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN 695
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 335 DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFASASPD 393
D S + H T SHD T RLW L H V V+ HP Y+F +S
Sbjct: 572 DVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDK 631
Query: 394 NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS-GADNGTMCFWDWRTGYNFQRLQ 451
+ W G ++ GH A + SI V +G +S G+++G + WD TG ++++
Sbjct: 632 TCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMR 690
Score = 121 (47.7 bits), Expect = 0.00066, P = 0.00066
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 167 SCQELVPSTENQLVPTTAS--NTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRC 224
+C+ LV + + T+ S N ++ ++ K + + H Y+ GH V
Sbjct: 517 TCKTLVGHS-GTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYK---GHNHPVWD 572
Query: 225 VAVEPGNEWFATGSADKIIKVWDLA-TGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDR 283
V+ P +FAT S D+ ++W L++ GH+ V ++ P Y+F+ D+
Sbjct: 573 VSFSPLGHYFATASHDQTARLWSCDHIYPLRI-FAGHLNDVDCVSFHPNGCYVFTGSSDK 631
Query: 284 TVKCWDLEY---------NKAPV------QPG---SMDSESGIFSMTFDNSGSRLITTEA 325
T + WD+ + APV G S SE GI ++ +G RL
Sbjct: 632 TCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRG 691
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
+Y S ++E + +I+G D T+R+WDL
Sbjct: 692 HGKNAIYSL--SYSKEGNVLISGGADHTVRVWDL 723
Score = 74 (31.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 23/87 (26%), Positives = 36/87 (41%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH +V + S P L++ D T R+W + T + + GH + + V
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYF 582
Query: 91 GT----KTVLLESCERIMFVLGTAGFL 113
T +T L SC+ I + AG L
Sbjct: 583 ATASHDQTARLWSCDHIYPLRIFAGHL 609
Score = 71 (30.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T + Y GH V +S P TA D TAR+W + GH N + V
Sbjct: 558 TALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCV 615
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 203 (76.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 65/263 (24%), Positives = 110/263 (41%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
KPQ A YR +GH V CV P A+ S DK +++W + + H
Sbjct: 48 KPQSRA----YR-FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHT 102
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
GSVR + S L + DD+++K W + K + + + + F G ++
Sbjct: 103 GSVRSVCFSADGQSLLTASDDQSIKLWSVHRQK--IICTLREHNNWVRCARFSPDGQLMV 160
Query: 322 TTEADKTVKLYKEDD-------------SATEESHP----VITGSHDCTIRLWDLAAGKS 364
+ D+TVKL+ S+ + HP + T S D T+R+WD+
Sbjct: 161 SVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTL 220
Query: 365 LCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNN 423
L H +V +++ HP+ +AS D+ +K EG+ + L GH + + +
Sbjct: 221 LQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSR 280
Query: 424 EGVLVSGADNGTMCFWDWRTGYN 446
G + A + WRT ++
Sbjct: 281 SGDQFASAGSDQQVMV-WRTNFD 302
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/234 (24%), Positives = 99/234 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + + P + A+GS D + VW++ TGH +V + S
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTV 329
P L S D+TV+ W V + +G + S+ F G L+T D+++
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESVL---FRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 330 KLY---KEDDSATEESH----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHK 372
KL+ ++ T H P +++ S D T++LWD ++ + + T
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 373 KSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
V HP+ A+AS DN ++ W +Q+ H+A +N++ + G
Sbjct: 187 GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG 240
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 70/325 (21%), Positives = 128/325 (39%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
T+ R++ GH ++ ++ P+ + + D++ VW+++ ++ Y TGH + + V
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCV-- 66
Query: 84 QASEPQVGTKTVLLESCERIMFV-LGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNL 142
Q LL S R V L + G++R Q L
Sbjct: 67 -----QFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSA-DGQSLLTA 120
Query: 143 ---QEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALP 199
Q ++ SVH R H+ ++ C P + QL+ + S+ + ++
Sbjct: 121 SDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP--DGQLM-VSVSDDRTVKL------- 170
Query: 200 MPKPQWHAPWK-LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
W A + L G+ V P + AT S+D ++VWD+ T L
Sbjct: 171 -----WDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDNSG 317
H +V L+ P +L + D T+K DL E G S S + +F SG
Sbjct: 226 VHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCV---SFSRSG 282
Query: 318 SRLITTEADKTVKLYKEDDSATEES 342
+ + +D+ V +++ + + + S
Sbjct: 283 DQFASAGSDQQVMVWRTNFDSVDYS 307
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T V +R T+++HY H ++VN +S HP+ + L+TA DST ++ D+ +YTL G
Sbjct: 209 TVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHG 268
Query: 74 HTNTIASVVTQASEPQ 89
H + + V S Q
Sbjct: 269 HQGSASCVSFSRSGDQ 284
Score = 116 (45.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 32/115 (27%), Positives = 49/115 (42%)
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWK 399
+ ++T S D +I+LW + K +CTL H VR P + S S D +K W
Sbjct: 113 DGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Query: 400 CPEGKFIQNL--PGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQV 452
+ I PG + ++ + + +DN T+ WD RT Q QV
Sbjct: 173 ASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDN-TVRVWDIRTHTLLQHYQV 226
Score = 85 (35.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+A+G + S+ V +++ + + GH +V + P+ +L ++ RD T R+W
Sbjct: 33 IASGSVDASVM--VWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPS 90
Query: 64 TKANVYTLTGHTNTIASVVTQA 85
K HT ++ SV A
Sbjct: 91 VKGESVLFRAHTGSVRSVCFSA 112
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 182 (69.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 60/214 (28%), Positives = 91/214 (42%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSH 350
+ + + + E I+++ + +G T + + L D + S
Sbjct: 379 KQDSCVHDLQAHNKE--IYTIKWSPTGPG--TNNPNANLMLASLDSA-----------SF 423
Query: 351 DCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
D T+RLWD+ G + TLT H++ V SVA P AS S D + W G + +
Sbjct: 424 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY 483
Query: 410 PGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
G I +C N G V + A +G++C D R
Sbjct: 484 RGTGGIFE-VCWNAAGDKVGASASDGSVCVLDLR 516
Score = 100 (40.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 54/245 (22%), Positives = 98/245 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 252 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 309
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L ++ P++ + + ++ +D +G+ L +
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDR-PIKTFQGHTNE-VNAIKWDPTGNLLASC 367
Query: 324 EADKTVKLYK-EDDSATEESHPVITGSHDC-TIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
D T+K++ + DS H + + + TI+ W G TN+ + +A
Sbjct: 368 SDDMTLKIWSMKQDSCV---HDLQAHNKEIYTIK-WS-PTGPG----TNNPNANLMLA-- 416
Query: 382 PTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFW 439
SAS D+ ++ W G I L H + S+ + +G L SG+ + + W
Sbjct: 417 ----SLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
Query: 440 DWRTG 444
+ +TG
Sbjct: 473 NTQTG 477
Score = 98 (39.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 241 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 299
Query: 295 APVQ------PG-SMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
A Q P +D +S F+ + + D+ +K ++ +
Sbjct: 300 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T+++W + + L H K + ++ PT
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPT 402
Score = 68 (29.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 198
Score = 45 (20.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 281 ILSAGVDKTTIIWDAHT 297
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 144 (55.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 339 TEESHPVITGSHDCTIRLWDLAAG-KSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IK 396
+ +SH + S DCT+R+WD + + L L H V V +P + S S D I+
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
W+ GK ++ + H+ I+S+ N +G ++VS + +G+ WD + G
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Score = 137 (53.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 41/165 (24%), Positives = 72/165 (43%)
Query: 205 WHA--PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W A P++ +V+ GH +V CV P + +GS D+ I++W++ TGK + H
Sbjct: 112 WDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM 171
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT-FDNSGSRLI 321
+ + + + S D + K WD + + +D +S S F +G ++
Sbjct: 172 PISSVHFNRDGSLIVSASHDGSCKIWDAK--EGTCLKTLIDDKSPAVSFAKFSPNGKFIL 229
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHD---CTIRLWDLAAGK 363
D T+KL + AT + V TG + C + + GK
Sbjct: 230 VATLDSTLKL---SNYATGKFLKVYTGHTNKVFCITSAFSVTNGK 271
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 47/191 (24%), Positives = 74/191 (38%)
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
+ P++ + + GH + CV A+ S DK + +W L GH +
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLE--YNKAPVQPG--------SMDSESG-IFSMTFD 314
L S Y S DD T++ WD Y V G + + S I S +FD
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 315 NSGSRLITTEADKTVKLYKEDDSATEESH------PVITGSHDCTIRLWDLAAGKSLCTL 368
+ R+ + K V++ K H +++ SHD + ++WD G L TL
Sbjct: 150 ET-IRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 369 TNHKKSVRSVA 379
+ K S A
Sbjct: 209 IDDKSPAVSFA 219
Score = 118 (46.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 308 IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESH------PVITGSHDCTIRLWDLAA 361
I S +FD + R+ + K V++ K H +++ SHD + ++WD
Sbjct: 143 IVSGSFDET-IRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 362 GKSLCTLTNHKKSVRSVA-LHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHN----AI 415
G L TL + K S A P A+ D+ +K GKF++ GH I
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 416 INSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
++ V N +VSG+++ + WD + QRL+
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
Score = 101 (40.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 206 HAPWKLYRVISGHLGWVRCV--AVEPGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
+A K +V +GH V C+ A N ++ +GS D + +WDL + L GH
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTD 301
Query: 263 SVRGLTVSPRHPYLFSCGD--DRTVKCW 288
+V ++ P + S G+ D+T++ W
Sbjct: 302 AVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 100 (40.3 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKC 400
S+ +++GS D TIR+W++ GK + + H + SV + + SAS D + K W
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Query: 401 PEGKFIQNLPGHNAIINSICV---NNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
EG ++ L + S N + +LV+ D+ T+ ++ TG F ++ +G
Sbjct: 200 KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDS-TLKLSNYATG-KF----LKVYTG 253
Query: 458 FPKPSVFFFFLAFSYLN 474
VF AFS N
Sbjct: 254 HTN-KVFCITSAFSVTN 269
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 29/111 (26%), Positives = 47/111 (42%)
Query: 229 PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS---PRHPYLFSCGDDRTV 285
P ++ + D +K+ + ATGK TGH V +T + Y+ S +D V
Sbjct: 223 PNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282
Query: 286 KCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
WDL+ N G D+ + N S DKT++++K+D
Sbjct: 283 YLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSS-GNHLDKTIRIWKQD 332
Score = 86 (35.3 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNT 77
S ++I Y GH S ++ ++ +A D T R+WD R+ + L GHTN
Sbjct: 71 SATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNF 130
Query: 78 IASV 81
+ V
Sbjct: 131 VFCV 134
Score = 84 (34.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
L V+R GH + V ++ +P +++++ D T R+W+V+T V + H+ I+SV
Sbjct: 121 LKVLR---GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV 176
Score = 82 (33.9 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS---PDNIKQWK 399
+++GS D + LWDL A L L H +V SV+ HP +S+ I+ WK
Sbjct: 273 IVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/103 (30%), Positives = 47/103 (45%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV--ALHPTLYMF-ASASPDN-IKQWKC 400
++ + D T++L + A GK L T H V + A T + S S DN + W
Sbjct: 228 ILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Query: 401 PEGKFIQNLPGH-NAIINSIC--VNNEGVLVSGAD-NGTMCFW 439
+Q L GH +A+I+ C V NE + SG + T+ W
Sbjct: 288 QARNILQRLEGHTDAVISVSCHPVQNE-ISSSGNHLDKTIRIW 329
Score = 64 (27.6 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 16/83 (19%), Positives = 39/83 (46%)
Query: 5 ATGKLKLSLTGHVGSVRGLTVIRHY-H-----GHLSSVNTISLHPTIDVLITAGRDSTAR 58
+ G + TG+ G+ + + + Y H GH ++++ + ++L +A D T
Sbjct: 9 SNGVANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMI 68
Query: 59 VWDVRTKANVYTLTGHTNTIASV 81
+W + ++ GH++ I+ +
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDL 91
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 190 (71.9 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L +
Sbjct: 238 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 293
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 294 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 354 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 413
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 414 RFD-NKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 471
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 472 SSHDDTILIWDF 483
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 207 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 262
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 263 DSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 317
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 318 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 377
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 378 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 433
Score = 119 (46.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 242 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNNGM 296
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 297 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 350
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Query: 452 -VRCV 455
VRC+
Sbjct: 409 LVRCI 413
Score = 58 (25.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 228 IWDKSTLECKRILTGHTGSV 247
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 196 (74.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 57/221 (25%), Positives = 95/221 (42%)
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
W AT S D+ I+++D T L T H +R LTV P PYL S DDR ++ WD E
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWE- 221
Query: 293 NKAPVQPGSMDSESGIFSMTFDNSGSRL-ITTEADKTVKLYK--EDDS-ATEESHP---- 344
N+ ++ + I + + + ++ DKT+K++K E +S T E H
Sbjct: 222 NEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVN 281
Query: 345 ---------VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
+++GS DC+I +WD+ K + TL N K+ + ++ + A +
Sbjct: 282 CVEFLTGGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDSTV 341
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTM 436
K W + L + + G D+G +
Sbjct: 342 KIWNSQTFSLEKELNFEKGRAWCVAAGKSDAIAVGFDSGAV 382
Score = 133 (51.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 46/164 (28%), Positives = 72/164 (43%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLATGKLKLSLTGH--- 260
W W++ + H ++ +AV P + E F +GS DK +KVW L + +L GH
Sbjct: 220 WENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKG 279
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
V V LT R + S DD ++ WD++ K + + F F + +
Sbjct: 280 VNCVEFLT-GGR---IVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFK---TWI 332
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKS 364
I+ D TVK++ + E+ G R W +AAGKS
Sbjct: 333 ISGAEDSTVKIWNSQTFSLEKELNFEKG------RAWCVAAGKS 370
Score = 115 (45.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQW 398
E+ ++GS D T+++W L +S+CTL H+K V V T S S D +I W
Sbjct: 245 EDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL-TGGRIVSGSDDCSICVW 303
Query: 399 KCPEGKFIQNLPGHNAIINSICVNN--EGVLVSGADNGTMCFWDWRT-----GYNFQRLQ 451
K I+ L NA N++ + ++SGA++ T+ W+ +T NF++ +
Sbjct: 304 DIQTQKCIETLK--NAHKNNVTFVTPFKTWIISGAEDSTVKIWNSQTFSLEKELNFEKGR 361
Query: 452 VRCVS 456
CV+
Sbjct: 362 AWCVA 366
Score = 85 (35.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANV-YTLTGHTNTIASVV 82
++I + H + ++++HPT+ LI+A D RVWD + + H + I +
Sbjct: 182 SLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIA 241
Query: 83 TQASEPQV 90
+P++
Sbjct: 242 VNPEDPEM 249
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/115 (19%), Positives = 48/115 (41%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V+ V W T +++W+ T L ++ S R R ++
Sbjct: 106 HSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIA 165
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ DD+ ++ +D E + + + S+ I S+T + LI+ D+ ++++
Sbjct: 166 TASDDQQIRIFDAE-TFSLINEFTAHSDF-IRSLTVHPTLPYLISASDDRKIRVW 218
Score = 52 (23.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
+ TA D R++D T + + T H++ I S+ + P
Sbjct: 164 IATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLP 204
Score = 45 (20.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 28 HYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANV 68
++ H V ++ H ++TA ++W+ TK V
Sbjct: 102 NFVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLV 142
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 131 (51.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 417 SASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGAL 476
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 477 VHSYRGTGGIFE-VCWNAAGDKVGASASDGSVCVLDLR 513
Score = 98 (39.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 241 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 299
Query: 295 APVQ------PG-SMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
A Q P +D +S F+ + + D+ +K ++ +
Sbjct: 300 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T+++W + + L H K + ++ PT
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Score = 93 (37.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLYKED 335
+ + +Q + + + +S T +N + L+ A D TV+L+ D
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ A V S GIF + ++ +G ++ + +D +V
Sbjct: 472 QTG-ALVH--SYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 87 (35.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I PT ++L + D T ++W ++ V+ L H I ++
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 86 SEP 88
+ P
Sbjct: 402 TGP 404
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 252 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 309
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L ++ P++ + + ++ +D +G+ L +
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDR-PIKTFQGHTNE-VNAIKWDPTGNLLASC 367
Query: 324 EADKTVKLY--KEDDSATE-ESH 343
D T+K++ K+D+ + ++H
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAH 390
Score = 68 (29.0 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 198
Score = 45 (20.9 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 281 ILSAGVDKTTIIWDAHT 297
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 131 (51.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 417 SASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGAL 476
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 477 VHSYRGTGGIFE-VCWNAAGDKVGASASDGSVCVLDLR 513
Score = 98 (39.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 241 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 299
Query: 295 APVQ------PG-SMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
A Q P +D +S F+ + + D+ +K ++ +
Sbjct: 300 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T+++W + + L H K + ++ PT
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Score = 93 (37.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLYKED 335
+ + +Q + + + +S T +N + L+ A D TV+L+ D
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ A V S GIF + ++ +G ++ + +D +V
Sbjct: 472 QTG-ALVH--SYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 87 (35.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I PT ++L + D T ++W ++ V+ L H I ++
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 86 SEP 88
+ P
Sbjct: 402 TGP 404
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 252 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 309
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L ++ P++ + + ++ +D +G+ L +
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDR-PIKTFQGHTNE-VNAIKWDPTGNLLASC 367
Query: 324 EADKTVKLY--KEDDSATE-ESH 343
D T+K++ K+D+ + ++H
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAH 390
Score = 68 (29.0 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 198
Score = 45 (20.9 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 281 ILSAGVDKTTIIWDAHT 297
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 131 (51.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 417 SASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGAL 476
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 477 VHSYRGTGGIFE-VCWNAAGDKVGASASDGSVCVLDLR 513
Score = 98 (39.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 241 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 299
Query: 295 APVQ------PG-SMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
A Q P +D +S F+ + + D+ +K ++ +
Sbjct: 300 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T+++W + + L H K + ++ PT
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Score = 93 (37.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLYKED 335
+ + +Q + + + +S T +N + L+ A D TV+L+ D
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ A V S GIF + ++ +G ++ + +D +V
Sbjct: 472 QTG-ALVH--SYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 87 (35.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I PT ++L + D T ++W ++ V+ L H I ++
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 86 SEP 88
+ P
Sbjct: 402 TGP 404
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 252 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 309
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L ++ P++ + + ++ +D +G+ L +
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDR-PIKTFQGHTNE-VNAIKWDPTGNLLASC 367
Query: 324 EADKTVKLY--KEDDSATE-ESH 343
D T+K++ K+D+ + ++H
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAH 390
Score = 68 (29.0 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 198
Score = 45 (20.9 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 281 ILSAGVDKTTIIWDAHT 297
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 131 (51.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G + TLT H++ V SVA P AS S D + W G
Sbjct: 417 SASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGAL 476
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 477 VHSYRGTGGIFE-VCWNAAGDKVGASASDGSVCVLDLR 513
Score = 98 (39.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 241 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 299
Query: 295 APVQ------PG-SMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
A Q P +D +S F+ + + D+ +K ++ +
Sbjct: 300 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T+++W + + L H K + ++ PT
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Score = 93 (37.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA--DKTVKLYKED 335
+ + +Q + + + +S T +N + L+ A D TV+L+ D
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVD 430
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N A+ S D +++WD+ G +LT H V + SP YL S D+ V W+
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
+ A V S GIF + ++ +G ++ + +D +V
Sbjct: 472 QTG-ALVH--SYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 87 (35.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I PT ++L + D T ++W ++ V+ L H I ++
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 86 SEP 88
+ P
Sbjct: 402 TGP 404
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 252 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 309
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L ++ P++ + + ++ +D +G+ L +
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDR-PIKTFQGHTNE-VNAIKWDPTGNLLASC 367
Query: 324 EADKTVKLY--KEDDSATE-ESH 343
D T+K++ K+D+ + ++H
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAH 390
Score = 68 (29.0 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 198
Score = 45 (20.9 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 281 ILSAGVDKTTIIWDAHT 297
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 183 (69.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 225 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 280
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 281 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 340
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 341 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 400
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 401 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 458
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 459 SSHDDTILIWDF 470
Score = 173 (66.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 58/225 (25%), Positives = 102/225 (45%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA 295
+G D IK+WD ++ + LTGH GSV L R + + D TV+ WD+ N
Sbjct: 206 SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWDV--NTG 261
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE--------------- 340
V + + + F N ++T D+++ ++ + SAT+
Sbjct: 262 EVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDITLRRVLVGHRAAVN 318
Query: 341 ----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-I 395
+ +++ S D TI++W + + + TL HK+ + + L + S S DN I
Sbjct: 319 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTI 376
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 377 RLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 420
Score = 122 (48.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 229 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 283
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 284 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 337
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 338 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 395
Query: 452 -VRCV 455
VRC+
Sbjct: 396 LVRCI 400
Score = 64 (27.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
D +I+ RD++ ++WD + + LTGHT ++
Sbjct: 202 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV 234
Score = 47 (21.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD ++ + LTGH GSV
Sbjct: 215 IWDKSSLECLKVLTGHTGSV 234
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 133 (51.9 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G TLT H++ V S+A P AS S D + W G
Sbjct: 427 SASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSL 486
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N G V + A +G++C D R
Sbjct: 487 VHSYQGTGGIFE-VCWNARGDKVGASASDGSVCVLDLR 523
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +++WD+ G +LT H V + SP YL S D+ V W+ +
Sbjct: 426 ASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGS 485
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + ++ G ++ + +D +V
Sbjct: 486 L-VH--SYQGTGGIFEVCWNARGDKVGASASDGSV 517
Score = 92 (37.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A GS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 251 AMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 309
Query: 295 APVQ-PGSMDSESGIF---SMTFDNSGS----RLITTEADKTVKLYKEDDSAT-----EE 341
A Q P + + TF + G+ + D VK ++ + +
Sbjct: 310 AKQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDP 369
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 370 SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/140 (22%), Positives = 51/140 (36%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + E ++S+ F G L +
Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVEQGVC-THTLTKHQEP-VYSIAFSPDGKYLASG 470
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 471 SFDKCVHIWNTQSGSLVHSY 490
Score = 88 (36.0 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 378 SDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
+G L H + SI + +G L SG+ + + W+ ++G
Sbjct: 438 DVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSG 484
Score = 86 (35.3 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ A V+ L H+ I ++
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 411
Query: 86 SEPQVGT--KTVLLES 99
+ P +++L S
Sbjct: 412 TGPATSNPNSSIMLAS 427
Score = 82 (33.9 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ D I V L + GH V + P L SC DD T+K W +
Sbjct: 329 NTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 388
Query: 291 EYNKA--PVQPGSMDSESGIFSMTFD-----NSGSRLITTEADKTVKLY 332
+ + +Q S + + +S T NS L + D TV+L+
Sbjct: 389 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 80 (33.2 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 262 WTENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 319
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SCG D + L + PV+ + + ++ +D SG L +
Sbjct: 320 PALDVDWQNNTTFASCGTDMCIHVCRLGCD-LPVKTFQGHTNE-VNAIKWDPSGMLLASC 377
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 378 SDDMTLKIWSMKQD 391
Score = 77 (32.2 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 173 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 213
Score = 45 (20.9 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 291 ILSAGVDKTTIIWDAHT 307
Score = 38 (18.4 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 50 TAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ G D V + V T GHTN + ++
Sbjct: 334 SCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAI 365
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 187 (70.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 63/214 (29%), Positives = 94/214 (43%)
Query: 249 ATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-------Y--NKAPVQP 299
A+G +L GH G V L SC +D TV+ WDL+ Y + PV
Sbjct: 342 ASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWD 401
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE--ESHP----VITGSHDCT 353
+ S FS + +RL + ++LY S + + HP + TGS D T
Sbjct: 402 VDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKT 461
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGH 412
+RLW G S+ T H+ V ++A P ASA D +K W G ++L GH
Sbjct: 462 VRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGH 521
Query: 413 NAIINSICVNNEGVLVSGAD-NGTMCFWDWRTGY 445
I+S+ + + LV+ A + T+ WD R +
Sbjct: 522 TDTISSLSFSQDSSLVASASMDNTVRVWDIRNAH 555
Score = 180 (68.4 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 42/121 (34%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L SP
Sbjct: 432 RLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPN 491
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL G D+ I S++F S + + D TV++
Sbjct: 492 GKYLASAGEDQRLKLWDLASGGLFKDLRGHTDT---ISSLSFSQDSSLVASASMDNTVRV 548
Query: 332 Y 332
+
Sbjct: 549 W 549
Score = 139 (54.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V +A P ++ A+ D+ +K+WDLA+G L L GH ++ L+ S
Sbjct: 474 RLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQD 533
Query: 273 HPYLFSCGDDRTVKCWDLE--YNKAP 296
+ S D TV+ WD+ + AP
Sbjct: 534 SSLVASASMDNTVRVWDIRNAHGSAP 559
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 56/237 (23%), Positives = 91/237 (38%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
V + A G + +K+W L KLK H V + ++ L DD
Sbjct: 288 VSADSRLLAAGFDNSAVKLWSLRARKLKAG--PHKADVSKIRLAC--DVLEEEADDEDAS 343
Query: 287 CWDLEY---NKAPV-QPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE------DD 336
+++ + PV + + SG+ S + D++ TV LY+ D
Sbjct: 344 GSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTV-LYRGHAYPVWDV 402
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-I 395
+ S T SHD T RLW A L H V V HP A+ S D +
Sbjct: 403 DVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTV 462
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+ W +G ++ GH + ++ + G L S ++ + WD +G F+ L+
Sbjct: 463 RLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLR 519
Score = 114 (45.2 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 1 VWDLATGKLKL--SLTGHVGSVR----GLTV-IRHYHGHLSSVNTISLHPTIDVLITAGR 53
VWD+ L S H + R T +R Y GHLS V+ + HP + + T
Sbjct: 399 VWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGST 458
Query: 54 DSTARVWDVRTKANVYTLTGHTNTIASV 81
D T R+W R A+V TGH + ++
Sbjct: 459 DKTVRLWSTRQGASVRLFTGHRGPVLTL 486
Score = 67 (28.6 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
I+ GH V + L++ DST R WD+++ N GH + V
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDV 402
Score = 65 (27.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 21/75 (28%), Positives = 29/75 (38%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P TA D TAR+W + GH + + V +
Sbjct: 392 YRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSN 451
Query: 89 QVGT----KTVLLES 99
+ T KTV L S
Sbjct: 452 YIATGSTDKTVRLWS 466
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL 248
L++ + GH + ++ + A+ S D ++VWD+
Sbjct: 514 LFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 62/238 (26%), Positives = 109/238 (45%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SG L ++R V P + ATG+ DK+I++WDL+T ++ L GH + L P
Sbjct: 253 SGDL-YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
L S DR+V+ WDL ++ + ++ E G+ ++ G + D+TV+++
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSL---TLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVW--- 365
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
DS T + ++ D + +N+ + + S +L T+ ++ +
Sbjct: 366 DSTTGFLVERLDSGNENGNGHEDSVYSVAF---SNNGEQIASGSLDRTVKLWHLEGKSD- 421
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICV--NNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
K+ C E +I GH + S+C +NE +L D G + FWD +G LQ
Sbjct: 422 KKSTC-EVTYI----GHKDFVLSVCCTPDNEYILSGSKDRGVI-FWDQASGNPLLMLQ 473
Score = 176 (67.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 59/243 (24%), Positives = 110/243 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
++ +++ GH + + P + +GS D+ +++WDL T + L+L+ G V + V
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAV 346
Query: 270 SPRHPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDS---ESGIFSMTFDNSGSRLITTE 324
SP + + DRTV+ WD + + G+ + E ++S+ F N+G ++ +
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 325 ADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
D+TVKL+ + + ++S C + T HK V SV P
Sbjct: 407 LDRTVKLWHLEGKSDKKS--------TCEV------------TYIGHKDFVLSVCCTPDN 446
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGH-NAIIN-SICVNN---EGVLVSGADNGTMCF 438
S S D + W G + L GH N++I+ ++ +N+ EG+ +G+ +
Sbjct: 447 EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARI 506
Query: 439 WDW 441
W W
Sbjct: 507 WKW 509
Score = 72 (30.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P +L T D R+WD+ TK + L GH I S+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 62/238 (26%), Positives = 109/238 (45%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SG L ++R V P + ATG+ DK+I++WDL+T ++ L GH + L P
Sbjct: 253 SGDL-YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
L S DR+V+ WDL ++ + ++ E G+ ++ G + D+TV+++
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSL---TLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVW--- 365
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
DS T + ++ D + +N+ + + S +L T+ ++ +
Sbjct: 366 DSTTGFLVERLDSGNENGNGHEDSVYSVAF---SNNGEQIASGSLDRTVKLWHLEGKSD- 421
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICV--NNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
K+ C E +I GH + S+C +NE +L D G + FWD +G LQ
Sbjct: 422 KKSTC-EVTYI----GHKDFVLSVCCTPDNEYILSGSKDRGVI-FWDQASGNPLLMLQ 473
Score = 176 (67.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 59/243 (24%), Positives = 110/243 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
++ +++ GH + + P + +GS D+ +++WDL T + L+L+ G V + V
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAV 346
Query: 270 SPRHPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDS---ESGIFSMTFDNSGSRLITTE 324
SP + + DRTV+ WD + + G+ + E ++S+ F N+G ++ +
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 325 ADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
D+TVKL+ + + ++S C + T HK V SV P
Sbjct: 407 LDRTVKLWHLEGKSDKKS--------TCEV------------TYIGHKDFVLSVCCTPDN 446
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGH-NAIIN-SICVNN---EGVLVSGADNGTMCF 438
S S D + W G + L GH N++I+ ++ +N+ EG+ +G+ +
Sbjct: 447 EYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARI 506
Query: 439 WDW 441
W W
Sbjct: 507 WKW 509
Score = 72 (30.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P +L T D R+WD+ TK + L GH I S+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 135 (52.6 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 34/98 (34%), Positives = 48/98 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD G + TLT H++ V SVA P AS S D + W G
Sbjct: 414 SASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGAL 473
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N+ G V + A +G++C D R
Sbjct: 474 VNSYRGTGGIFE-VCWNSTGDKVGASASDGSVCVLDLR 510
Score = 97 (39.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 40/163 (24%), Positives = 64/163 (39%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + ++ S G D+T WD +
Sbjct: 237 ATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE 295
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHP----VI---- 346
A Q + + +N+ + T KL +E T + H I
Sbjct: 296 AKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDP 355
Query: 347 TG------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
TG S D T++LW + + L H K + ++ PT
Sbjct: 356 TGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPT 398
Score = 88 (36.0 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 315 NNTFASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSM 374
Query: 291 EYNKA--PVQPGSMDSESGIFSMT---FDNSGSRLITTEA---DKTVKLYKEDDSA 338
+ + +Q S + + +S T +N + L+ + D TV+L+ + A
Sbjct: 375 KQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGA 430
Score = 88 (36.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
I+ + GH + VN I PT ++L + D T ++W ++ V+ L H+ I ++
Sbjct: 338 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSP 397
Query: 86 SEP 88
+ P
Sbjct: 398 TGP 400
Score = 87 (35.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA 295
+ S D +++WD G +LT H V + SP +L S D+ V W+ + + A
Sbjct: 414 SASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQ-SGA 472
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + ++++G ++ + +D +V
Sbjct: 473 LVN--SYRGTGGIFEVCWNSTGDKVGASASDGSV 504
Score = 76 (31.8 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 30/134 (22%), Positives = 53/134 (39%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 248 WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFH--SA 305
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V + F SC D + L + P++ + + ++ +D +G+ L +
Sbjct: 306 PALDVDWQSNNTFASCSTDMCIHVCKLGQER-PIKTFQGHTNE-VNAIKWDPTGNLLASC 363
Query: 324 EADKTVKLY--KED 335
D T+KL+ K+D
Sbjct: 364 SDDMTLKLWSMKQD 377
Score = 68 (29.0 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
GH S V + +P D+L + DSTAR+W++
Sbjct: 163 GHESEVFICAWNPVSDLLASGSGDSTARIWNL 194
Score = 45 (20.9 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 277 ILSAGVDKTTIIWDAHT 293
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 181 (68.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 61/238 (25%), Positives = 107/238 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H G VR + P F +G D IKVW+ T + +L GH+ VR + P P++
Sbjct: 50 HDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWIL 109
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKEDD 336
S DD+T++ W+ + N++ + +M + + F + + + D++V+++
Sbjct: 110 SASDDQTIRIWNWQ-NRSLIC--TMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISG 166
Query: 337 SATEESHPVITGSHDCTIRLWDLAA---GKSLCT----LTNHKKSVRSVALHPTLYMFAS 389
+ S P D R + A G + L H + V VA HP+L + S
Sbjct: 167 LRKKHSAPTTMSFEDQMARANNAQADMFGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVS 226
Query: 390 ASPDN-IKQWKCPEGKF--IQNLPGH--NAIINSICV--NNEGVLVSGADNGTMCFWD 440
A D IK W+ + K + GH NA S C+ ++ +++S ++ T+ WD
Sbjct: 227 AGDDRLIKLWRMSDTKAWEVDTCRGHFQNA---SACLFHPHQDLILSVGEDKTIRAWD 281
Score = 160 (61.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 57/236 (24%), Positives = 94/236 (39%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GHL +VR V P W + S D+ I++W+ L ++TGH V P
Sbjct: 89 LNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTED 148
Query: 275 YLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ S D++V+ WD+ K P +M E M N+ + D VK
Sbjct: 149 LIASASLDQSVRIWDISGLRKKHSAPTTMSFED---QMARANNAQADMFGNTDAVVKFVL 205
Query: 334 ED-DSATE--ESHP----VITGSHDCTIRLWDLAAGKS--LCTLTNHKKSVRSVALHPTL 384
E D HP +++ D I+LW ++ K+ + T H ++ + HP
Sbjct: 206 EGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQ 265
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCF 438
+ S D I+ W + +Q+ I + E + +G D G M F
Sbjct: 266 DLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEINLFAAGHDTGVMVF 321
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ H TI+LWD G + H VR + HPT +F S D IK W
Sbjct: 24 ILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTR 83
Query: 404 KFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWR 442
+ + L GH + ++ + E ++S +D+ T+ W+W+
Sbjct: 84 RCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQ 123
Score = 124 (48.7 bits), Expect = 0.00051, P = 0.00051
Identities = 65/302 (21%), Positives = 115/302 (38%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
++ + S I+ HP ++ + ST ++WD R + H + +
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 85 ASEPQV--GTKTVLLE----SCERIMFVL-GTAGFLLSC-----LPSLL---DFGTIRPW 129
++P G ++ R +F L G ++ + LP +L D TIR W
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIW 120
Query: 130 QLQIIQEQCFLN-----LQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTA 184
Q C + + Q H L+ + + D + ++ + PTT
Sbjct: 121 NWQNRSLICTMTGHNHYVMCAQFHPTEDLIASA---SLDQSVRIWDISGLRKKHSAPTTM 177
Query: 185 S-NTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKII 243
S Q+ + A+A A K V+ GH V VA P + D++I
Sbjct: 178 SFEDQMARANNAQADMFGNTD--AVVKF--VLEGHDRGVNWVAFHPSLPLIVSAGDDRLI 233
Query: 244 KVWDLATGKL-KL-SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGS 301
K+W ++ K ++ + GH + P + S G+D+T++ WDL + PVQ
Sbjct: 234 KLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDLN-KRTPVQSFK 292
Query: 302 MD 303
D
Sbjct: 293 RD 294
Score = 99 (39.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
T+I + H V I HPT + ++ G D +VW+ +T+ ++TL GH + + +V
Sbjct: 42 TLIDRFEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFF 101
Query: 84 QASEPQV 90
P +
Sbjct: 102 HPELPWI 108
Score = 74 (31.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 40/194 (20%), Positives = 78/194 (40%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
++GH +V C P + A+ S D+ +++WD++ + K S + S +
Sbjct: 131 MTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTM-SFEDQMARANNA 189
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS---RLITTEADK--TV 329
G+ V + LE + V + + D+ R+ T+A + T
Sbjct: 190 QADMFGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTC 249
Query: 330 KLYKEDDSATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
+ + ++ SA HP +++ D TIR WDL + + +A HP +
Sbjct: 250 RGHFQNASACL-FHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEIN 308
Query: 386 MFASASPDNIKQWK 399
+FA+ + +K
Sbjct: 309 LFAAGHDTGVMVFK 322
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 190 (71.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L +
Sbjct: 301 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 356
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 357 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 416
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 417 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 476
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 477 RFD-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 534
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 535 SSHDDTILIWDF 546
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 270 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 325
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 326 DSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 380
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 381 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 440
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 441 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 496
Score = 119 (46.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 305 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNNGM 359
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 360 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 413
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 414 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 471
Query: 452 -VRCV 455
VRC+
Sbjct: 472 LVRCI 476
Score = 58 (25.5 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 291 IWDKSTLECKRILTGHTGSV 310
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 183 (69.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 259 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 314
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 315 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 435 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 492
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 493 SSHDDTILIWDF 504
Score = 173 (66.0 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 58/225 (25%), Positives = 102/225 (45%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA 295
+G D IK+WD ++ + LTGH GSV L R + + D TV+ WD+ N
Sbjct: 240 SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWDV--NTG 295
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE--------------- 340
V + + + F N ++T D+++ ++ + SAT+
Sbjct: 296 EVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDITLRRVLVGHRAAVN 352
Query: 341 ----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-I 395
+ +++ S D TI++W + + + TL HK+ + + L + S S DN I
Sbjct: 353 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTI 410
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 454
Score = 122 (48.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 263 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 317
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 318 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 371
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 372 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 452 -VRCV 455
VRC+
Sbjct: 430 LVRCI 434
Score = 64 (27.6 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
D +I+ RD++ ++WD + + LTGHT ++
Sbjct: 236 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV 268
Score = 47 (21.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD ++ + LTGH GSV
Sbjct: 249 IWDKSSLECLKVLTGHTGSV 268
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 183 (69.5 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 68/247 (27%), Positives = 111/247 (44%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLK-LSLTG-HVGSVRGLTVS 270
V+ GH V+CVA P AT S DK + +W++ + + +S+ H V+ +
Sbjct: 100 VLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWH 159
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L SC D V + E + + S ++ +TFD SG RL + D TVK
Sbjct: 160 PTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVK 219
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFAS 389
++KE P G + T W K +CTL+ H ++V +A P A+
Sbjct: 220 IWKE-------CQP--EGGQEGTDAAW-----KCVCTLSGFHGRTVYDIAWCPLTGALAT 265
Query: 390 A-SPDNIKQWK--------CPEGKFIQNLP-GHNAIINSICVNNE--GVLVSGADNGTMC 437
A D ++ +K P ++P H +N I + + G+LVS +DNG +
Sbjct: 266 ACGDDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEIA 325
Query: 438 FWDWRTG 444
W++++G
Sbjct: 326 VWNYQSG 332
Score = 54 (24.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK--ANVYTLTGHTNTIASV 81
GH +V ++ P + L +A D+T +W + + L GH N + V
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCV 111
Score = 46 (21.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 23 LTVIRHYHGHLSS-VNTISLHPTIDVLITAGRDSTARVWDVRT---KANVYTLTGHTNTI 78
L +++ ++ H S ++ +P +L + G D T R+W + GH T+
Sbjct: 5 LALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTV 64
Query: 79 ASV 81
V
Sbjct: 65 RKV 67
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 183 (69.5 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 274 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 329
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 389
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 450 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 507
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 508 SSHDDTILIWDF 519
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 58/225 (25%), Positives = 102/225 (45%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA 295
+G D IK+WD ++ + LTGH GSV L R + + D TV+ WD+ N
Sbjct: 255 SGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWDV--NTG 310
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE--------------- 340
V + + + F N ++T D+++ ++ + SAT+
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDITLRRVLVGHRAAVN 367
Query: 341 ----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-I 395
+ +++ S D TI++W + + + TL HK+ + + L + S S DN I
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTI 425
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 469
Score = 122 (48.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 278 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 332
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 333 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 386
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 387 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 444
Query: 452 -VRCV 455
VRC+
Sbjct: 445 LVRCI 449
Score = 64 (27.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
D +I+ RD++ ++WD + + LTGHT ++
Sbjct: 251 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV 283
Score = 47 (21.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD ++ + LTGH GSV
Sbjct: 264 IWDKSSLECLKVLTGHTGSV 283
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 190 (71.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L +
Sbjct: 337 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 392
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 393 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 453 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 513 RFD-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 570
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 571 SSHDDTILIWDF 582
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 306 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 361
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 362 DSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 416
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 417 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 476
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 477 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 532
Score = 119 (46.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 341 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNNGM 395
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 396 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 449
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 452 -VRCV 455
VRC+
Sbjct: 508 LVRCI 512
Score = 58 (25.5 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 327 IWDKSTLECKRILTGHTGSV 346
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 207 (77.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 72/252 (28%), Positives = 105/252 (41%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-TGHVGSVRGLTV 269
L + GH G V VA+ +GS + + K+WD ATG L +L +G GSV
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGFAGSV---AF 863
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
SP + + D + WD +Q I S+ F +L+T D T+
Sbjct: 864 SPDSRQIAAGFKDGKIFIWDAA---GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTI 920
Query: 330 KLYKEDDSATEES--H----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
K + +E+ H P + +GS D TI+LWD A G TLT H
Sbjct: 921 KRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLD 980
Query: 374 SVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGAD 432
+V V S S + +K W GK +QN + + + V+ +G + SG
Sbjct: 981 TVEKVVFSLDNRQIVSCSSEAVKIWDAATGK-VQNSFESDDVFTIVAVSPDGKHIASGHC 1039
Query: 433 NGTMCFWDWRTG 444
NG + WD TG
Sbjct: 1040 NGRIKLWDMATG 1051
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 104/452 (23%), Positives = 173/452 (38%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD TG L+ +L+G R Y V ++ P ++I+ D + +W
Sbjct: 646 LWDTTTGSLQKTLSGSHPK-------RRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLW 698
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
D T + + H T P+ G + L F C +
Sbjct: 699 DTTT-GDRQEIADHFGISKVNYTYLQPPEQGG------------YGLHAGAFSADC-KQI 744
Query: 121 LDFGTIRPWQLQIIQEQCFLNLQEVQR---HSVHTLVFRSLKRTHDM-FISCQ-ELVPST 175
FG R ++ + +LQ++ + H T+ F S R + C L +T
Sbjct: 745 AAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTT 804
Query: 176 ENQLVPTTASNT-QIIQQA-KAKALPMPKPQWHAPWKLYRVISGHL------GWVRCVAV 227
L T +T ++ A + + A KL+ +G L G+ VA
Sbjct: 805 TGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGFAGSVAF 863
Query: 228 EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKC 287
P + A G D I +WD A G L+ +L H G++ + SP L +C D T+K
Sbjct: 864 SPDSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKR 922
Query: 288 WDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVIT 347
WD+ VQ S+ + +M G + + ADKT+KL+ D+AT + +T
Sbjct: 923 WDITIGG--VQEAVGHSKH-VTTMVLSPDGKVIASGSADKTIKLW---DAATGDLQKTLT 976
Query: 348 GSHD----------------CT---IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFA 388
G D C+ +++WD A GK + + VA+ P A
Sbjct: 977 GHLDTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFT-IVAVSPDGKHIA 1035
Query: 389 SASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
S + IK W G ++ + G+ + +S+
Sbjct: 1036 SGHCNGRIKLWDMATGSLLKTMAGYRSKFDSL 1067
Score = 180 (68.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 62/248 (25%), Positives = 100/248 (40%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L +++ GH +A + TGS D +++W+ TG L+ + GH G+V + +S
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 271 PRHPYLFSCGDDRTVKCWD-----LEYNKAPVQPGSM--DSESGIFSMTFDNSGSRLITT 323
+ S G VK WD L A GS+ +S + F + G I
Sbjct: 826 SDGRQIVS-GSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKD-GKIFIWD 883
Query: 324 EADKTVKLYKEDDSA------TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
A K + A + + ++T S D TI+ WD+ G + H K V +
Sbjct: 884 AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIG-GVQEAVGHSKHVTT 942
Query: 378 VALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTM 436
+ L P + AS S D IK W G + L GH + + + + + + +
Sbjct: 943 MVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAV 1002
Query: 437 CFWDWRTG 444
WD TG
Sbjct: 1003 KIWDAATG 1010
Score = 177 (67.4 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 58/216 (26%), Positives = 93/216 (43%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH V + + P + A+GSADK IK+WD ATG L+ +LTGH+ +V + S + +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 277 FSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDD 336
SC + VK WD K VQ S +S+ + G + + + +KL+ D
Sbjct: 995 VSCSSE-AVKIWDAATGK--VQ-NSFESDDVFTIVAVSPDGKHIASGHCNGRIKLW---D 1047
Query: 337 SATEESHPVITGSHD-----CTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
AT + G T ++D+ +++ + + P + S S
Sbjct: 1048 MATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAI-----FNTQITGLVFSPDAKLILSTS 1102
Query: 392 PDN-IKQWKCPEGKFIQNLPGHN-AIINSICVNNEG 425
D IK W G + LP H+ +II + G
Sbjct: 1103 TDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSG 1138
Score = 136 (52.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 51/223 (22%), Positives = 91/223 (40%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V+ +A P ++ +G D + +WD TG + + H G + + + P G
Sbjct: 674 VKAMAFLPDSKLIISGYYDGSVMLWDTTTGD-RQEIADHFG-ISKVNYTYLQPPEQG-GY 730
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA--- 338
+ + + S DS M FD + T + K +K + + S
Sbjct: 731 GLHAGAFSADCKQIAAFGWSRDSTC---IMLFDTA-----TGDLQKILKGHSHECSTMAF 782
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQW 398
+ +S ++TGS DCT+RLW+ G T H +V SVA+ S S + +K W
Sbjct: 783 SSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLW 842
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G ++ L + S+ + + + +G +G + WD
Sbjct: 843 DAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIWD 883
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 42/154 (27%), Positives = 71/154 (46%)
Query: 113 LLSCLPSLLDFGTIRPWQ--LQIIQEQC--FLNLQEVQRHSV---HTLVFRSLKRTHDMF 165
LL LP +D +R + L++ ++ C +Q+ R + HTL L+
Sbjct: 521 LLDRLPRAID--ALRALEEILKLTKDDCQALAFVQDAMRFLLRHYHTLSHWPLQ------ 572
Query: 166 ISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCV 225
I ++ S E+ +V N + +A PM + W P + + ++GH V V
Sbjct: 573 IYSSAIIFSPESSVVK--GENLHKVPVWLGRAPPM-EDSW-TP--MIQTLTGHSEAVWRV 626
Query: 226 AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
A P + A+GS +IK+WD TG L+ +L+G
Sbjct: 627 AFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSG 660
Score = 92 (37.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 29/108 (26%), Positives = 46/108 (42%)
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLE----YNKAPVQPGSMDSE-----SG----IFS 310
+ GL SP + S DR +K WD + P S+ ++ SG IFS
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFS 1145
Query: 311 MTFDNSGSRLITTEADKTVKLYKEDDSATEESH-PVITGSHDCTIRLW 357
+ F + G + ADKT++++ + S + GSH + R W
Sbjct: 1146 VAFSSDGQHIAAASADKTIRVWSIEKSLKASKYLGRAVGSHIKSSRPW 1193
Score = 49 (22.3 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTG 73
+I+ GH +V ++ P I +G DS ++WD T + TL+G
Sbjct: 612 MIQTLTGHSEAVWRVAFSPD-GKQIASGSDSGLIKLWDTTTGSLQKTLSG 660
Score = 37 (18.1 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 68 VYTLTGHTNTIASVVTQASEPQVGT 92
+ TLTGH+ + V Q+ +
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIAS 637
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 207 (77.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 69/266 (25%), Positives = 116/266 (43%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH G VR +A P F +G D + VW+ + KL SL GH+ VR T +P++
Sbjct: 51 GHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWI 110
Query: 277 FSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
SC DD+T++ W+ + N + G + F S +++ D+TV+++
Sbjct: 111 LSCSDDQTIRIWNWQSRNCIAILTGHSHY---VMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Query: 336 DSATEESHPVITGSHDCTIRLW-----DLAAGKSLCT---LTNHKKSVRSVALHPTLYMF 387
+ + PV D + DL L H + V A HPTL +
Sbjct: 168 GLRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLI 227
Query: 388 ASASPDN-IKQWKCPEGKF--IQNLPGH-NAIINSICVNNEGVLVSGADNGTMCFWDW-- 441
SA D +K W+ K + GH N + + ++ +++S +++ T+ WD
Sbjct: 228 LSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNR 287
Query: 442 RTGYN-FQRLQVRC--VSGFPKPSVF 464
RT F+R R ++ PK ++F
Sbjct: 288 RTAVQTFRRDNDRFWFITVHPKLNLF 313
Score = 165 (63.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 66/244 (27%), Positives = 97/244 (39%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + GH+ +VR W + S D+ I++W+ + LTGH V
Sbjct: 86 KLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAF 145
Query: 270 SPRHPYLFSCGDDRTVKCWDLE----YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
P + S D+TV+ WD+ N APV SM E + NS S +
Sbjct: 146 HPSEDLIVSASLDQTVRVWDISGLRMKNAAPV---SMSLEDQLAQA--HNSISNDLFGST 200
Query: 326 DKTVKLYKED-DSATE--ESHP----VITGSHDCTIRLWDLAAGKS--LCTLTNHKKSVR 376
D VK E D HP +++ D ++LW + A K+ + T H +V
Sbjct: 201 DAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVS 260
Query: 377 SVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA-DNG 434
HP + SAS D I+ W +Q N I V+ + L + A D+G
Sbjct: 261 CCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSG 320
Query: 435 TMCF 438
M F
Sbjct: 321 VMVF 324
Score = 132 (51.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++T H+ I+LWD G L H VR +A HPT +F S D + W
Sbjct: 26 ILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSR 85
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRT 443
K + +L GH + ++E ++S +D+ T+ W+W++
Sbjct: 86 KLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQS 126
Score = 130 (50.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 42/154 (27%), Positives = 65/154 (42%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
VA P W T + I++WD G L GH G VRG+ P P S GDD
Sbjct: 17 VAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYK 76
Query: 285 VKCWDLEYNKAPVQP-GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDS-----A 338
V W+ + K G MD + TF + +++ D+T++++
Sbjct: 77 VNVWNYKSRKLLFSLCGHMDY---VRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAIL 133
Query: 339 TEESH--------P----VITGSHDCTIRLWDLA 360
T SH P +++ S D T+R+WD++
Sbjct: 134 TGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 92 (37.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
+++ S D TIR+WDL ++ T + +HP L +FA+A + +K +
Sbjct: 271 ILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERER 330
Query: 405 FIQNLPGHNAIINSIC-VNNEGVLVS 429
P H IN++ VN E +VS
Sbjct: 331 -----PAHALNINTLLYVNKEKSIVS 351
Score = 91 (37.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
T++ + GH V I+ HPT + ++ G D VW+ +++ +++L GH + +
Sbjct: 44 TLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYV 98
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVR-TKA-NVYTLTGHTNTIA 79
GH VN + HPT+ ++++AG D ++W + +KA V T GH N ++
Sbjct: 210 GHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVS 260
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 183 (69.5 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 199 PMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
P PKP+ ++ ++ GHL V V P A+G AD +KVW +TGKL +
Sbjct: 157 PPPKPE-SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE 215
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
GH+ + ++ SP + S DD+T++ W++ KA P + + ++++ F G+
Sbjct: 216 GHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTP-FIGHHNYVYAIAFSPKGN 274
Query: 319 RLITTEADKTVKLYKEDDSATEESHPV----ITG-------------SHDCTIRLWDLAA 361
L++ D+ V L+ + +S P ++G + D +R+WD +
Sbjct: 275 MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTST 334
Query: 362 GKSLCTLTN 370
G+ L TL +
Sbjct: 335 GQCLRTLVH 343
Score = 161 (61.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 69/265 (26%), Positives = 109/265 (41%)
Query: 205 WHAPW-KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS-LTGHVG 262
W A KL GHL + ++ P A+GS DK I++W++ TGK + GH
Sbjct: 203 WAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHN 262
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLI 321
V + SP+ L S D V WD+ + P D SGI + +D + LI
Sbjct: 263 YVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGI-DVVWDGT---LI 318
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS-VRSVAL 380
+ AT D +R+WD + G+ L TL + V SV
Sbjct: 319 AS-------------CAT-----------DGLVRIWDTSTGQCLRTLVHEDNPPVSSVKF 354
Query: 381 HPT-LYMFASASPDNIKQWKCPEGKFIQNLPGHN----AIINSICVNNEGV--------- 426
P Y+ A D ++ W EG+ ++ GH+ ++ + V + +
Sbjct: 355 SPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAF 414
Query: 427 LVSGADNGTMCFWDWRTGYNFQRLQ 451
VSG+++G + WD T QR++
Sbjct: 415 AVSGSEDGAILCWDVVTKKVLQRIE 439
Score = 148 (57.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 70/273 (25%), Positives = 119/273 (43%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT-KANVYTLTGHTNTIASVVT 83
+I + GHL+ ++TIS P + + D T R+W+V T KA+ GH N + ++
Sbjct: 210 LIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAI-- 267
Query: 84 QASEPQVGTKTVLLESCERIMFVLGT-AGFLLSCLPSLLD--FGTIRPWQLQIIQEQCFL 140
A P+ G V S + +F+ + ++ LP+ D G W +I
Sbjct: 268 -AFSPK-GNMLVS-GSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATD 324
Query: 141 NLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPM 200
L + S + R+L + +S + P+ + L T ++ + + L
Sbjct: 325 GLVRIWDTSTGQCL-RTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKT 383
Query: 201 PKPQWHAPWKLYRVISGHLG-WVRCVAVE-PGNEWFATGSADKIIKVWDLATGKLKLSLT 258
Q H+ K Y +SG G + + + PG + +GS D I WD+ T K+ +
Sbjct: 384 Y--QGHSN-KKYS-LSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIE 439
Query: 259 GHVGSVRGL-TVSPRHP-YLFSCGDDRTVKCWD 289
H G V G+ T S ++ SCG D TV+ W+
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 99 (39.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 55/215 (25%), Positives = 85/215 (39%)
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNS- 316
GH V + SP+ L S D V WD+ + P D SGI + +D +
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGI-DVVWDGTL 317
Query: 317 -GS-------RLITTEADKTVKLYKEDDSATEES---HP----VITGSHDCTIRLWDLAA 361
S R+ T + ++ +D+ S P V+ + D +RLWD
Sbjct: 318 IASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVE 377
Query: 362 GKSLCTLTNH---KKSV--------RSVALHPTLYMFA-SASPDN-IKQWKCPEGKFIQN 408
G+ L T H K S+ +S+ Y FA S S D I W K +Q
Sbjct: 378 GRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQR 437
Query: 409 LPGHNAIINSI--CVNNEG-VLVSGADNGTMCFWD 440
+ H+ ++ + C EG +VS +GT+ W+
Sbjct: 438 IEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 87 (35.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GHL V+ + P ++ + G D +VW T +YT GH I+++
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 518 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 576
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 577 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 636
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 637 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 697 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 183 (69.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 619 RIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 678
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 679 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 735
Query: 332 Y 332
+
Sbjct: 736 W 736
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 54/238 (22%), Positives = 91/238 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V V + A G AD ++VW + KL+ S+ S L
Sbjct: 462 YTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQ--ASDLSLIDKE 517
Query: 272 RHPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L D++T + Y + PV S + + ++ RL + + +
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
YK D + + ++G HD RLW + L H V HP
Sbjct: 578 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 637
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 638 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 695
Score = 121 (47.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + + P + ATG+ D + +WD+ G + L GH +V L S
Sbjct: 661 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 720
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD ++ + +G ++ +NS L+ T K+
Sbjct: 721 GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLP-ENSQELLLGTYMTKS 775
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ VN HP + + T D T R+WDV V TGH I S+
Sbjct: 618 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 673
Score = 65 (27.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 538 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 582
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 564 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 623
Query: 74 H 74
H
Sbjct: 624 H 624
Score = 47 (21.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAG--RDSTARVWDVRTK 65
T + Y G L++V+ T D + AG DST RVW V K
Sbjct: 463 TFLNAYQG-LTAVDV-----TDDSSLIAGGFADSTVRVWSVTPK 500
Score = 37 (18.1 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 520 DVLERIMDEKTASELKILYGHSGPV 544
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 167 (63.8 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 53/202 (26%), Positives = 96/202 (47%)
Query: 209 WKLYRVIS-GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT--GHVGSVR 265
W V+S GH +R VA P ++ A+ S D + +WD +G+ + + T GH V+
Sbjct: 49 WVAKTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVK 108
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDL----EYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
++ S L +C D++V W++ EY A V + ++ + + + L
Sbjct: 109 SVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVL--NTHTQD-VKKVEWHPHEDILA 165
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLA---AGKSLCTLTNHKKSVRSV 378
+ D T+KLYKED + ++ S SH+ T+ W ++ +G L + ++ + +V+
Sbjct: 166 SASYDNTIKLYKEDLADSDWSSFDTLVSHESTV--WSISFDGSGNRLASCSDDQ-TVKIW 222
Query: 379 ALHPTLYMFASASPDNIKQWKC 400
+ F + PDN WKC
Sbjct: 223 QEYKPGNEFGVSCPDNTPVWKC 244
Score = 156 (60.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 63/244 (25%), Positives = 110/244 (45%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG---KLKLSLTGHVGSVRGLTVSP 271
+ GH V+ V+ AT S DK + VW++A + L H V+ + P
Sbjct: 100 LEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHP 159
Query: 272 RHPYLFSCGDDRTVKCW--DLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
L S D T+K + DL + + ES ++S++FD SG+RL + D+TV
Sbjct: 160 HEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTV 219
Query: 330 KLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFA 388
K+++E E D T +W K +CTL H +SV ++ + A
Sbjct: 220 KIWQEYKPGNEFG----VSCPDNT-PVW-----KCVCTLAGYHSRSVYDISWCKQSGLLA 269
Query: 389 SASPDN-IKQWKCPEG--------KFIQNLPGHNAIINSICVNNE--GVLVSGADNGTMC 437
+A D+ ++ +K EG + + + H+ +N++ N G+LV+ +D+G +
Sbjct: 270 TACGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVK 329
Query: 438 FWDW 441
W +
Sbjct: 330 LWKY 333
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVW--DLA---TGKLKLSLTGHVGSV 264
+L + ++GH G P AT DK I++W D + K LS GH ++
Sbjct: 5 ELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLS-DGHSRTI 63
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
R + SP YL S D TV WD + + E+ + S+++ SGS L T
Sbjct: 64 RDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCS 123
Query: 325 ADKTVKLYK 333
DK+V +++
Sbjct: 124 RDKSVWVWE 132
Score = 74 (31.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT---KANVYTLTGHTNTIASV 81
GH ++ ++ P L +A D+T +WD ++ + N TL GH N + SV
Sbjct: 58 GHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNA-TLEGHENEVKSV 110
Score = 72 (30.4 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW--DV--RTKANVYTLTGHTNTI 78
L +++ GH HP +VL T G D T R+W D R A GH+ TI
Sbjct: 4 LELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTI 63
Query: 79 ASV 81
V
Sbjct: 64 RDV 66
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 520 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 578
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 639 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 699 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 183 (69.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 621 RIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 680
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 681 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 332 Y 332
+
Sbjct: 738 W 738
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/240 (22%), Positives = 92/240 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V V + A G AD ++VW + KL+ V L++
Sbjct: 464 YTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAADLSLID 517
Query: 272 RHP--YLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+ L D++T + Y + PV S + + ++ RL + +
Sbjct: 518 KESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC 577
Query: 329 VKLYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ YK D + + ++G HD RLW + L H V HP
Sbjct: 578 LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 637
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 638 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Score = 125 (49.1 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + + P + ATG+ D + +WD+ G + L GH +V L S
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD V+ + +G ++ +NS L+ T K+
Sbjct: 723 GEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLP-ENSQELLLGTYMTKS 777
Score = 101 (40.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ VN HP + + T D T R+WDV V TGH I S+
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Score = 65 (27.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 540 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 584
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 566 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 625
Query: 74 H 74
H
Sbjct: 626 H 626
Score = 47 (21.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAG--RDSTARVWDVRTK 65
T + Y G L++V+ T D + AG DST RVW V K
Sbjct: 465 TFLNAYQG-LTAVDV-----TDDSSLIAGGFADSTVRVWSVTPK 502
Score = 37 (18.1 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPV 546
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 520 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 578
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 638
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 639 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 699 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 183 (69.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 621 RIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 680
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 681 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 332 Y 332
+
Sbjct: 738 W 738
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 54/238 (22%), Positives = 91/238 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V V + A G AD ++VW + KL+ S+ S L
Sbjct: 464 YTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQ--ASDLSLIDKE 519
Query: 272 RHPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L D++T + Y + PV S + + ++ RL + + +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
YK D + + ++G HD RLW + L H V HP
Sbjct: 580 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 639
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 640 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
Score = 121 (47.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + + P + ATG+ D + +WD+ G + L GH +V L S
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD ++ + +G ++ +NS L+ T K+
Sbjct: 723 GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLP-ENSQELLLGTYMTKS 777
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ VN HP + + T D T R+WDV V TGH I S+
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Score = 65 (27.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 540 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 584
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 566 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 625
Query: 74 H 74
H
Sbjct: 626 H 626
Score = 47 (21.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAG--RDSTARVWDVRTK 65
T + Y G L++V+ T D + AG DST RVW V K
Sbjct: 465 TFLNAYQG-LTAVDV-----TDDSSLIAGGFADSTVRVWSVTPK 502
Score = 37 (18.1 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPV 546
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 521 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 579
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPN 639
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 640 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 700 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 183 (69.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 622 RIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 681
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 682 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 738
Query: 332 Y 332
+
Sbjct: 739 W 739
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 54/238 (22%), Positives = 91/238 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V V + A G AD ++VW + KL+ S+ S L
Sbjct: 465 YTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-SVKQ--ASDLSLIDKE 520
Query: 272 RHPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L D++T + Y + PV S + + ++ RL + + +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
YK D + + ++G HD RLW + L H V HP
Sbjct: 581 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNS 640
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 641 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Score = 122 (48.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + + P + ATG+ D + +WD+ G + L GH +V L S
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD ++ + +G ++ +NS L+ T K+
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLP-ENSQELLLGTYMTKS 778
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ VN HP + + T D T R+WDV V TGH I S+
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 676
Score = 65 (27.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 541 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 585
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 567 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 626
Query: 74 H 74
H
Sbjct: 627 H 627
Score = 47 (21.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAG--RDSTARVWDVRTK 65
T + Y G L++V+ T D + AG DST RVW V K
Sbjct: 466 TFLNAYQG-LTAVDV-----TDDSSLIAGGFADSTVRVWSVTPK 503
Score = 37 (18.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPV 547
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 64/221 (28%), Positives = 101/221 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL S +D TV+ W L+
Sbjct: 521 SDDVLERIMDEKTASELKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCL 579
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN 639
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
V TGS D T+RLWD+ G + T HK + S+ P A+ + D + W
Sbjct: 640 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH + S+ + +G +L SG+ + T+ WD
Sbjct: 700 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 183 (69.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + LT SP
Sbjct: 622 RIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN 681
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + + S+ F G L + D TV+L
Sbjct: 682 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 738
Query: 332 Y 332
+
Sbjct: 739 W 739
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/240 (22%), Positives = 92/240 (38%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V V + A G AD ++VW + KL+ V L++
Sbjct: 465 YTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAADLSLID 518
Query: 272 RHP--YLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+ L D++T + Y + PV S + + ++ RL + +
Sbjct: 519 KESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC 578
Query: 329 VKLYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ YK D + + ++G HD RLW + L H V HP
Sbjct: 579 LVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 638
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 639 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
Score = 122 (48.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + + P + ATG+ D + +WD+ G + L GH +V L S
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD ++ + +G ++ +NS L+ T K+
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLP-ENSQELLLGTYMTKS 778
Score = 101 (40.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ VN HP + + T D T R+WDV V TGH I S+
Sbjct: 621 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 676
Score = 65 (27.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L+++ D T R+W ++T + GH
Sbjct: 541 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 585
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 567 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 626
Query: 74 H 74
H
Sbjct: 627 H 627
Score = 47 (21.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAG--RDSTARVWDVRTK 65
T + Y G L++V+ T D + AG DST RVW V K
Sbjct: 466 TFLNAYQG-LTAVDV-----TDDSSLIAGGFADSTVRVWSVTPK 503
Score = 37 (18.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 54 DSTARVWDVRTKANVYTLTGHTNTI 78
D R+ D +T + + L GH+ +
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPV 547
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 167 (63.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 60/242 (24%), Positives = 108/242 (44%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG---KLKLSLTGHVGSVRGLTVSP 271
+ GH V+ V AT DK + +W++ + + H V+ + P
Sbjct: 90 LEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHP 149
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
L SC D T+K + + + ES ++S++FD SG R+++ DKTV++
Sbjct: 150 TKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRI 209
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFASA 390
+K +E V++G H W K +C L+ H +++ V + A+A
Sbjct: 210 WKSYPPGNQEG-VVVSGKHT----KW-----KCVCVLSGYHDRTIYDVHWSKVSGLIATA 259
Query: 391 SPDN-IKQWKCPEGKFIQNLPG----------HNAIINSICVN--NEGVLVSGADNGTMC 437
S D+ I+ +K + +N P H+ +NSIC + +E +L + +D+GT+
Sbjct: 260 SGDDCIRIFK-EDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVK 318
Query: 438 FW 439
W
Sbjct: 319 LW 320
Score = 71 (30.1 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT---KANVYTLTGHTNTIASV 81
GH ++ ++ P L +A D+T +WD ++ + N TL GH N + SV
Sbjct: 48 GHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNA-TLEGHENEVKSV 100
Score = 57 (25.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVR-TKANVYTLT--GHTNTIASV 81
GH V +++ P VL + G D T R+W K T+ GH TI S+
Sbjct: 3 GHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSL 56
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 203 (76.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 68/261 (26%), Positives = 109/261 (41%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
WKL +++ V + ATG D + +W ++ +SLTGH +V +
Sbjct: 11 WKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQ 70
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGI--FSM-TFDNSGS-----R 319
+ + + +++ WDLE K G S S + M + SGS +
Sbjct: 71 FNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIK 130
Query: 320 LITTEADKTVKLYKEDDSATE------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
L V YK A + + + S D T++LWDL AGK + T+H
Sbjct: 131 LWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS 190
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGA 431
+V V HP Y+ AS S D +K W + I + G ++ S+ N +G L SG+
Sbjct: 191 AVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS 250
Query: 432 DNGTMCFWDWRTGYNFQRLQV 452
+N T+ + W F + V
Sbjct: 251 EN-TLRVYGWEPDRCFDVVHV 270
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 190 (71.9 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L +
Sbjct: 296 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 351
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 352 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 411
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 412 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 471
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 472 RFD-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 529
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 530 SSHDDTILIWDF 541
Score = 175 (66.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 60/239 (25%), Positives = 109/239 (45%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD T + K LTGH GSV L R + +
Sbjct: 265 VYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSS 320
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 321 DSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 375
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 376 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 435
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 436 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 491
Score = 119 (46.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 300 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNNGM 354
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 355 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 408
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 409 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 466
Query: 452 -VRCV 455
VRC+
Sbjct: 467 LVRCI 471
Score = 55 (24.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD T + K LTGH GSV
Sbjct: 286 IWDKNTLECKRILTGHTGSV 305
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 182 (69.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 41/121 (33%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V CV P + + ATGS DK +++W G TGH G V L+ SP
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPN 479
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
YL S G+D+ +K WDL + G DS I S+ F + + D +V++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDS---ITSLAFSPDSGLIASASMDNSVRV 536
Query: 332 Y 332
+
Sbjct: 537 W 537
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/213 (29%), Positives = 96/213 (45%)
Query: 250 TG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL-EYNKAPVQPGSM----D 303
TG ++K+ L GH G V L SC +D +++ WDL + + G D
Sbjct: 331 TGTEMKI-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 304 SESGIFSMTFDNSGSRLITTEA---DKT--VKLYKED--DSATEESHP----VITGSHDC 352
+ FS+ F SGS T D+T +++Y D + HP + TGS D
Sbjct: 390 VDISPFSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPG 411
T+RLW G S+ T H+ V S++ P ASA D +K W G + L G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 412 HNAIINSICVN-NEGVLVSGADNGTMCFWDWRT 443
H I S+ + + G++ S + + ++ WD R+
Sbjct: 509 HTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541
Score = 144 (55.7 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G V ++ P ++ A+ D+ +K+WDLA+G L L GH S+ L SP
Sbjct: 462 RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPD 521
Query: 273 HPYLFSCGDDRTVKCWDLEYN--KAPVQPGSMDSESGIFSMTFDN 315
+ S D +V+ WD+ P GS G+++ N
Sbjct: 522 SGLIASASMDNSVRVWDIRSTCCNTPAD-GSSGELVGVYTGQMSN 565
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 58/234 (24%), Positives = 90/234 (38%)
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
+ ++ A G + IK+W L + KLK S HV + R + D+ +
Sbjct: 276 ISSDSKLLAAGFDNSCIKLWSLRSKKLK-SEPHHVDTSRIRLACDTLEEEENEEDNTGTE 334
Query: 287 CWDLEYNKAPVQPGS-MDSESGIFSMTFDNSGSRLITTEADKTVKLYKE------DDSAT 339
L + PV + SG+ S + D S TV LY+ D +
Sbjct: 335 MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDVDIS 393
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQW 398
S +GSHD T RLW L H V V HP A+ S D ++ W
Sbjct: 394 PFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+G ++ GH + S+ + G L S ++ + WD +G F+ L+
Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Score = 121 (47.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V V + P + +FA+GS D+ ++W T L++ GH+ V + P Y
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNY 440
Query: 276 LFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--- 331
L + D+TV+ W + N + G + S++F +G L + D+ +KL
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGH---RGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497
Query: 332 -----YKE----DDSATE-----ESHPVITGSHDCTIRLWDLAAGKSLCTLT 369
+KE DS T +S + + S D ++R+WD+ +S C T
Sbjct: 498 ASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI---RSTCCNT 546
Score = 105 (42.0 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R Y GHL+ V+ + HP + L T D T R+W + +V TGH + S+
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Score = 70 (29.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A L++ + GH + +A P + A+ S D ++VWD+ + G G
Sbjct: 495 WDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGE 554
Query: 264 VRGL 267
+ G+
Sbjct: 555 LVGV 558
Score = 56 (24.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 23/94 (24%), Positives = 35/94 (37%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
Y GH V + + P + D TAR+W + GH + V +
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 89 QVGT----KTVLLESCER---IMFVLGTAGFLLS 115
+ T KTV L S ++ + G G +LS
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Score = 52 (23.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T ++ GH V + L++ D + R WD+ + N GH + V
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Score = 47 (21.6 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 48 LITAGRDSTA-RVWDVRTKANVYTLTGHTNT----IASVVTQASEPQ---VGTKTVLLES 99
L+ AG D++ ++W +R+K + + H +T +A + E + GT+ +L
Sbjct: 282 LLAAGFDNSCIKLWSLRSK-KLKSEPHHVDTSRIRLACDTLEEEENEEDNTGTEMKILRG 340
Query: 100 -CERIM---FVLGTAGFLLSCLPSLLDFGTIRPWQL 131
C + F+ ++G LLSC + +IR W L
Sbjct: 341 HCGPVYSTRFLADSSG-LLSCSEDM----SIRYWDL 371
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 131 (51.2 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G TL H++ V SVA P AS S D + W G
Sbjct: 423 SASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSL 482
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWDWR 442
+ + G I +C N +G V + A +G++C D R
Sbjct: 483 VHSYQGTGGIFE-VCWNAQGDKVGASASDGSVCVLDLR 519
Score = 104 (41.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 37/163 (22%), Positives = 68/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
ATGS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 247 ATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGE 305
Query: 295 APVQ------PG-SMDSESGI-FSMTFDNSGSRLITTEADKTVKLYKEDDSAT-----EE 341
A Q P +D ++ F+ + + D+ VK ++ + +
Sbjct: 306 AKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP 365
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H+K + ++ PT
Sbjct: 366 SGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPT 408
Score = 92 (37.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 30/140 (21%), Positives = 52/140 (37%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + +L H + + SP
Sbjct: 349 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPT 408
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + + ++S+ F G L +
Sbjct: 409 GPTTSNPNSSIMLASASFDSTVRLWDME--QGVCTHTLRKHQEPVYSVAFSPDGKYLASG 466
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 467 SFDKCVHIWNTQSGSLVHSY 486
Score = 90 (36.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +++WD+ G +L H V + SP YL S D+ V W+ +
Sbjct: 422 ASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 481
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + ++ G ++ + +D +V
Sbjct: 482 L-VH--SYQGTGGIFEVCWNAQGDKVGASASDGSV 513
Score = 89 (36.4 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H+K + ++ PT M ASAS D+ ++ W
Sbjct: 374 SDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLW 433
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
+G L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 434 DMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 480
Score = 86 (35.3 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + + GH V + P L SC DD T+K W +
Sbjct: 325 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 384
Query: 291 E 291
+
Sbjct: 385 K 385
Score = 85 (35.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ A V+ L H I ++
Sbjct: 348 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSP 407
Query: 86 SEPQVGT--KTVLLES 99
+ P +++L S
Sbjct: 408 TGPTTSNPNSSIMLAS 423
Score = 71 (30.1 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
TV+R GH S V + +P D+L + DSTAR+W++
Sbjct: 169 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNL 204
Score = 45 (20.9 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 287 ILSAGVDKTTIIWDAHT 303
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 163 (62.4 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 63/237 (26%), Positives = 112/237 (47%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSL--TGHVGSVRGLTV 269
+++ GH V + V FA+ + D+ I++W + G++ +GH SV +
Sbjct: 370 QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICC 429
Query: 270 SP-RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
S + +L + D TVK W L P ++ ++S T +SG L+ +A T
Sbjct: 430 SRLKESFLVTGSQDCTVKLWPL--------PEALLAKS-----TAADSGPVLL--QAQTT 474
Query: 329 VKLYKEDDS--ATEESHPVI-TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
+ + +D + A + ++ TGS D T +LW L + L T H++ + +V PT
Sbjct: 475 RRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQ 534
Query: 386 MFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG--VLVSGADNGTMCFW 439
+ A+AS D IK W + ++ GH+A + + + G +L SG+D G + W
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSD-GLLKLW 590
Score = 126 (49.4 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
+ +AV P ++ ATGS D+ K+W L +L TGH + + SP L +
Sbjct: 482 INSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASA 541
Query: 282 DRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY--KEDDSA 338
D T+K W L+ ++ G ++ + + F + GS+L+++ +D +KL+ K ++
Sbjct: 542 DGTIKLWALQDFSCLKTFEGH---DASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECV 598
Query: 339 -TEESHP-VITGSHDCT 353
T ++H + G H C+
Sbjct: 599 RTLDAHEDKVWGLH-CS 614
Score = 121 (47.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 156 RSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVI 215
++ +R HD I+ L S ++L+ T + + + AK ALP +L V
Sbjct: 472 QTTRRCHDKDIN--SLAVSPNDKLLATGSQD----RTAKLWALPQ--------CQLLGVF 517
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
+GH + V P ++ AT SAD IK+W L + GH SV + R
Sbjct: 518 TGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQ 577
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
L S G D +K W ++ N+ V+ ++D+ E ++ + IT +D + L+K+
Sbjct: 578 LLSSGSDGLLKLWTIKSNEC-VR--TLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKD 634
Query: 335 DDSATE 340
A +
Sbjct: 635 VTEAEQ 640
Score = 88 (36.0 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 5 ATGKLKLSLTGHVGSVRGLTVIRHY---H--GHLSSVNTISLHP--TIDVLITAGRDSTA 57
AT L L+ G G+VR +++HY H G V+ ++ HP T +L ++ D++
Sbjct: 119 ATSTL-LATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSI 177
Query: 58 RVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFV 106
RVW ++ ++ + LT H + + S+ SE G T+L ++I V
Sbjct: 178 RVWSLQDRSCLAVLTAHYSAVTSL--SFSE---GGHTMLSSGRDKICIV 221
Score = 71 (30.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT-QASEPQV 90
H S+V ++S ++++GRD VWD+++ T+ + ASV+ + P +
Sbjct: 194 HYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPAL 253
Query: 91 GTKT 94
G K+
Sbjct: 254 GVKS 257
Score = 61 (26.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 24 TVIRHYHG-HLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
TV R + H + V +++ T +L T G D RVWD+
Sbjct: 99 TVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL---TGHTNTIASV 81
HGH V + + + + +D + R+W + V + +GHT+++ ++
Sbjct: 373 HGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTI 427
Score = 50 (22.7 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVR--TKANVYTLTGHTNTIASVVTQASEPQVGT 92
+ + L P +VL+TA R W R T ++ HT +AS+ A+ + T
Sbjct: 69 ITSFDLSPDDEVLVTASRALLLAQWAWREGTVTRLWKAI-HTAPVASMAFDATSTLLAT 126
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 31 GHLSSVNTISLHPTID-VLITAGRDSTARVW 60
GH SV TI + L+T +D T ++W
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWDL + + ++ SV ++ V + LH +TAG RVW
Sbjct: 221 VWDLQSYQTTRTVPVFE-SVEASVLLPEQPAPALGVKSSGLH-----FLTAGDQGILRVW 274
Query: 61 DVRTKANVYT 70
+ + VYT
Sbjct: 275 EAASGQCVYT 284
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 185 (70.2 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ G++ +L H +V L +
Sbjct: 238 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-- 293
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 294 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 354 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 413
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 414 RFD-NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 471
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 472 SSHDDTILIWDF 483
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 207 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 262
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 263 DSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 317
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 318 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 377
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 378 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 433
Score = 119 (46.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 242 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NAGEMLNTLIHHCEAVLHLRFNNGM 296
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 297 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 350
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Query: 452 -VRCV 455
VRC+
Sbjct: 409 LVRCI 413
Score = 58 (25.5 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 228 IWDKSTLECKRILTGHTGSV 247
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 171 (65.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNE-WFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVS 270
R +SGH V V N+ + S D +++WD++TG +K+ + +R ++ S
Sbjct: 195 RTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPS 254
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+L S G D+ + W E + A + + E+ I F S E T+
Sbjct: 255 FDGKWLVSGGRDQAITVW--EVSSAEPKAALLGHENFIECCVFAPPASY----EHLATLA 308
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFAS 389
K+ AT V TG+ D TI+LW+ A G+ + TL H VR + HP Y+F+
Sbjct: 309 GLKKPPPATSSCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSV 367
Query: 390 ASPDNIKQWKCP-EGKFIQNLPG-HNAIINSI 419
+ I+ W EG+ ++ + G H ++ I
Sbjct: 368 SDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 70/278 (25%), Positives = 120/278 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD G+++ +L GH+ V GL Y G NT+ L + D T ++W
Sbjct: 140 IWDWELGEIERTLKGHIRGVSGLD----YGGQKG--NTL--------LASCSSDLTIKLW 185
Query: 61 DV-RTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPS 119
D + AN+ TL+GH ++++SV S + + RI V + GF + + S
Sbjct: 186 DPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGTLRIWDV--STGFCVKVIKS 242
Query: 120 LLD--FGTIRP-----WQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELV 172
+ + P W + ++Q + + EV + H+ FI C
Sbjct: 243 ATESWIRDVSPSFDGKWLVSGGRDQA-ITVWEVSSAEPKAALLG-----HENFIECCVFA 296
Query: 173 P--STENQLV--------PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWV 222
P S E+ P T+S + A+ K + + W A +L + + GH WV
Sbjct: 297 PPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKL----WEARGRLIKTLHGHDNWV 352
Query: 223 RCVAVEPGNEWFATGSADKIIKVWDLAT-GKLKLSLTG 259
R + PG ++ + S DK I+ WDL+ G+L +++G
Sbjct: 353 RGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 48/164 (29%), Positives = 75/164 (45%)
Query: 195 AKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
A+A W ++ H V CVA P A+GS D IK+WD G+++
Sbjct: 90 ARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIE 149
Query: 255 LSLTGHVGSVRGLTVSPR--HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT 312
+L GH+ V GL + + L SC D T+K WD + A ++ S S + S+
Sbjct: 150 RTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHS-VSSVR 208
Query: 313 FDNSG-SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIR 355
F S + LI+ D T++++ D +T VI + + IR
Sbjct: 209 FLTSNDNHLISASRDGTLRIW---DVSTGFCVKVIKSATESWIR 249
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 343 HPVIT----GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL--HPTLYMFASASPD-NI 395
HPV T GS DCTI++WD G+ TL H + V + + AS S D I
Sbjct: 123 HPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 396 KQWKCPEGKF--IQNLPGHNAIINSI--CVNNEGVLVSGADNGTMCFWDWRTGY 445
K W P + I+ L GH+ ++S+ +N+ L+S + +GT+ WD TG+
Sbjct: 183 KLWD-PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGF 235
Score = 71 (30.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H +V ++ HP L + D T ++WD TL GH ++ +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGL 162
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 171 (65.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNE-WFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVS 270
R +SGH V V N+ + S D +++WD++TG +K+ + +R ++ S
Sbjct: 195 RTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPS 254
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+L S G D+ + W E + A + + E+ I F S E T+
Sbjct: 255 FDGKWLVSGGRDQAITVW--EVSSAEPKAALLGHENFIECCVFAPPASY----EHLATLA 308
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT-LYMFAS 389
K+ AT V TG+ D TI+LW+ A G+ + TL H VR + HP Y+F+
Sbjct: 309 GLKKPPPATSSCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSV 367
Query: 390 ASPDNIKQWKCP-EGKFIQNLPG-HNAIINSI 419
+ I+ W EG+ ++ + G H ++ I
Sbjct: 368 SDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 70/278 (25%), Positives = 120/278 (43%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD G+++ +L GH+ V GL Y G NT+ L + D T ++W
Sbjct: 140 IWDWELGEIERTLKGHIRGVSGLD----YGGQKG--NTL--------LASCSSDLTIKLW 185
Query: 61 DV-RTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPS 119
D + AN+ TL+GH ++++SV S + + RI V + GF + + S
Sbjct: 186 DPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGTLRIWDV--STGFCVKVIKS 242
Query: 120 LLD--FGTIRP-----WQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELV 172
+ + P W + ++Q + + EV + H+ FI C
Sbjct: 243 ATESWIRDVSPSFDGKWLVSGGRDQA-ITVWEVSSAEPKAALLG-----HENFIECCVFA 296
Query: 173 P--STENQLV--------PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWV 222
P S E+ P T+S + A+ K + + W A +L + + GH WV
Sbjct: 297 PPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKL----WEARGRLIKTLHGHDNWV 352
Query: 223 RCVAVEPGNEWFATGSADKIIKVWDLAT-GKLKLSLTG 259
R + PG ++ + S DK I+ WDL+ G+L +++G
Sbjct: 353 RGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 48/164 (29%), Positives = 75/164 (45%)
Query: 195 AKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK 254
A+A W ++ H V CVA P A+GS D IK+WD G+++
Sbjct: 90 ARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIE 149
Query: 255 LSLTGHVGSVRGLTVSPR--HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT 312
+L GH+ V GL + + L SC D T+K WD + A ++ S S + S+
Sbjct: 150 RTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHS-VSSVR 208
Query: 313 FDNSG-SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIR 355
F S + LI+ D T++++ D +T VI + + IR
Sbjct: 209 FLTSNDNHLISASRDGTLRIW---DVSTGFCVKVIKSATESWIR 249
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 343 HPVIT----GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL--HPTLYMFASASPD-NI 395
HPV T GS DCTI++WD G+ TL H + V + + AS S D I
Sbjct: 123 HPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 396 KQWKCPEGKF--IQNLPGHNAIINSI--CVNNEGVLVSGADNGTMCFWDWRTGY 445
K W P + I+ L GH+ ++S+ +N+ L+S + +GT+ WD TG+
Sbjct: 183 KLWD-PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGF 235
Score = 71 (30.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H +V ++ HP L + D T ++WD TL GH ++ +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGL 162
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 183 (69.5 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 242 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 297
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 298 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 357
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 358 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 417
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 418 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 475
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 476 SSHDDTILIWDF 487
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 211 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 266
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 267 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 321
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 322 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 381
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 382 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 437
Score = 122 (48.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 246 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 300
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 301 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 354
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 355 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 412
Query: 452 -VRCV 455
VRC+
Sbjct: 413 LVRCI 417
Score = 60 (26.2 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 251
Score = 46 (21.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 232 IWDKTSLECLKVLTGHTGSV 251
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 183 (69.5 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 242 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 297
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 298 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 357
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 358 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 417
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 418 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 475
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 476 SSHDDTILIWDF 487
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 211 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 266
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 267 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 321
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 322 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 381
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 382 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 437
Score = 122 (48.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 246 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 300
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 301 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 354
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 355 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 412
Query: 452 -VRCV 455
VRC+
Sbjct: 413 LVRCI 417
Score = 60 (26.2 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 251
Score = 46 (21.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 232 IWDKTSLECLKVLTGHTGSV 251
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 190 (71.9 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L +
Sbjct: 337 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 392
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 393 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 453 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 513 RFD-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 570
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 571 SSHDDTILIWDF 582
Score = 175 (66.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 60/239 (25%), Positives = 109/239 (45%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD T + K LTGH GSV L R + +
Sbjct: 306 VYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSS 361
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 362 DSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 416
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 417 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 476
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 477 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 532
Score = 119 (46.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 341 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNNGM 395
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 396 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 449
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 452 -VRCV 455
VRC+
Sbjct: 508 LVRCI 512
Score = 55 (24.4 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD T + K LTGH GSV
Sbjct: 327 IWDKNTLECKRILTGHTGSV 346
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 125 (49.1 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 32/96 (33%), Positives = 45/96 (46%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+ S D T+RLWD+ G TL H++ V SVA P AS S D + W G
Sbjct: 427 SASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSL 486
Query: 406 IQNLPGHNAIINSICVNNEGVLV-SGADNGTMCFWD 440
+ + G I +C N G V + A +G++C D
Sbjct: 487 VHSYQGTGGIFE-VCWNARGDKVGASASDGSVCVLD 521
Score = 96 (38.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 31/140 (22%), Positives = 52/140 (37%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V + +P A+ S D +K+W + L H + + SP
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412
Query: 273 HP---------YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
P L S D TV+ WD+E + M + ++S+ F G L +
Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVE--QGVCTHTLMKHQEPVYSVAFSPDGKYLASG 470
Query: 324 EADKTVKLYKEDDSATEESH 343
DK V ++ + S+
Sbjct: 471 SFDKYVHIWNTQSGSLVHSY 490
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 39/163 (23%), Positives = 67/163 (41%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A GS D ++W G L +L H G + L + + Y+ S G D+T WD +
Sbjct: 251 AMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGE 309
Query: 295 APVQ-PGSMDSESGIF---SMTFDNSGS-------RLITTEADKTVKLYKEDDSAT--EE 341
A Q P + +MTF + + RL KT + + + +A +
Sbjct: 310 AKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDP 369
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
S ++ S D T+++W + + L H K + ++ PT
Sbjct: 370 SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412
Score = 87 (35.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+ S D +++WD+ G +L H V + SP YL S D+ V W+ +
Sbjct: 426 ASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGS 485
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
V S GIF + ++ G ++ + +D +V
Sbjct: 486 L-VH--SYQGTGGIFEVCWNARGDKVGASASDGSV 517
Score = 86 (35.3 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 31/109 (28%), Positives = 45/109 (41%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
N FA+ S D I V L + GH V + P L SC DD T+K W +
Sbjct: 329 NMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 388
Query: 291 EYNKA--PVQPGSMDSESGIFSMTFD-----NSGSRLITTEADKTVKLY 332
+ + +Q S + + +S T NS L + D TV+L+
Sbjct: 389 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 86 (35.3 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
++ + GH + VN I P+ +L + D T ++W ++ A V+ L H+ I ++
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 411
Query: 86 SEPQVGT--KTVLLES 99
+ P +++L S
Sbjct: 412 TGPATSNPNSSIMLAS 427
Score = 85 (35.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT---------LYMFASASPDN-IKQW 398
S D T+++W + + L H K + ++ PT M ASAS D+ ++ W
Sbjct: 378 SDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
+G L H + S+ + +G L SG+ + + W+ ++G
Sbjct: 438 DVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSG 484
Score = 77 (32.2 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN 67
TV+R GH S V + +P D+L + DSTAR+W++ +N
Sbjct: 173 TVLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 213
Score = 74 (31.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 31/134 (23%), Positives = 53/134 (39%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W L + H G + + + + DK +WD TG+ K H S
Sbjct: 262 WTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFH--SA 319
Query: 265 RGLTVSPRHPYLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
L V ++ F SC D + L + PV+ + + ++ +D SG L +
Sbjct: 320 PALDVDWQNNMTFASCSTDMCIHVCRLGCDH-PVKTFQGHTNE-VNAIKWDPSGMLLASC 377
Query: 324 EADKTVKLY--KED 335
D T+K++ K+D
Sbjct: 378 SDDMTLKIWSMKQD 391
Score = 44 (20.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 48 LITAGRDSTARVWDVRT 64
+++AG D T +WD T
Sbjct: 291 VLSAGVDKTTIIWDAHT 307
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 196 (74.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 68/249 (27%), Positives = 116/249 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
KL + + GH G V + E GN +GS D+ ++VWD+ G GH +VR L +
Sbjct: 685 KLRQKLEGHEGGVWALQYE-GNT-LVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQI 742
Query: 270 -SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSR-LITT---- 323
P + S + R + + K + GS DS+ ++ + +GSR I T
Sbjct: 743 LMPTE--VGSDTEGRPI----MSPPKPLIITGSRDSQLRVWRLP--EAGSRRYIQTGPPA 794
Query: 324 ---EADKTVKLYKEDDSATE--ESHP--VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
E +++ + + +H +++GS+DC++R+W ++ G+ L L H + V
Sbjct: 795 NDAECPYFLRILQGHTHSVRAISAHADTLVSGSYDCSVRVWRISTGEQLHWLQGHSQKVY 854
Query: 377 SVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGT 435
SV L S S D+ +K W G + L GH+ ++ + + +E LVS A + T
Sbjct: 855 SVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEGHSLLVGLLDLRDER-LVSAAADST 913
Query: 436 MCFWDWRTG 444
+ WD G
Sbjct: 914 LRIWDPENG 922
Score = 155 (59.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 68/264 (25%), Positives = 113/264 (42%)
Query: 209 WKLYRVISGHLGWV---RCV--AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W +V GH+ + R V ++ + TGS D++I V+D TGKL+ L GH G
Sbjct: 637 WTSGKVKPGHVAFAAHPRHVITCLQFDEDKIITGSDDQLIHVYDTNTGKLRQKLEGHEGG 696
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
V L L S DR+V+ WD+E G+ + F S +
Sbjct: 697 VWALQYEGNT--LVSGSTDRSVRVWDIE--------------KGLCTQVFYGHTSTVRCL 740
Query: 324 EADKTVKLYKEDDSATEESHP---VITGSHDCTIRLWDLA-AGKS--------------- 364
+ ++ + + S P +ITGS D +R+W L AG
Sbjct: 741 QILMPTEVGSDTEGRPIMSPPKPLIITGSRDSQLRVWRLPEAGSRRYIQTGPPANDAECP 800
Query: 365 --LCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICV 421
L L H SVR+++ H + S S D +++ W+ G+ + L GH+ + S+ +
Sbjct: 801 YFLRILQGHTHSVRAISAHADTLV--SGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVL 858
Query: 422 NNE-GVLVSGADNGTMCFWDWRTG 444
+++ +SG+ + + WD TG
Sbjct: 859 DHKRNRCISGSMDSLVKIWDLETG 882
Score = 118 (46.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 52/220 (23%), Positives = 86/220 (39%)
Query: 227 VEPGNEWFATGSADKIIKVWDLA-TGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTV 285
+ P TGS D ++VW L G + TG + PY T
Sbjct: 758 MSPPKPLIITGSRDSQLRVWRLPEAGSRRYIQTGPPAN------DAECPYFLRILQGHTH 811
Query: 286 KCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
+ + + GS D ++ ++ +G +L + K+Y + +
Sbjct: 812 SVRAISAHADTLVSGSYDCSVRVWRIS---TGEQLHWLQGHSQ-KVYSV--VLDHKRNRC 865
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKF 405
I+GS D +++WDL G L TL H V + L + A+A ++ W GK
Sbjct: 866 ISGSMDSLVKIWDLETGACLYTLEGHSLLVGLLDLRDERLVSAAAD-STLRIWDPENGKC 924
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
L H A I C ++ ++SG++ T+ WD TG
Sbjct: 925 KSILTAHTAAIT--CFQHDSRKVISGSEK-TVKMWDIATG 961
Score = 110 (43.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 44/169 (26%), Positives = 72/169 (42%)
Query: 257 LTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDN 315
L GH SVR +S L S D +V+ W + + Q + S ++S+ D+
Sbjct: 806 LQGHTHSVRA--ISAHADTLVSGSYDCSVRVWRISTGE---QLHWLQGHSQKVYSVVLDH 860
Query: 316 SGSRLITTEADKTVKLYKEDDSA---TEESHPVITG------------SHDCTIRLWDLA 360
+R I+ D VK++ + A T E H ++ G + D T+R+WD
Sbjct: 861 KRNRCISGSMDSLVKIWDLETGACLYTLEGHSLLVGLLDLRDERLVSAAADSTLRIWDPE 920
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNL 409
GK LT H ++ H + + S S +K W G+ I++L
Sbjct: 921 NGKCKSILTAHTAAITCFQ-HDSRKVI-SGSEKTVKMWDIATGECIEDL 967
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 231 NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
+E + +AD +++WD GK K LT H ++ R + S G ++TVK WD+
Sbjct: 902 DERLVSAAADSTLRIWDPENGKCKSILTAHTAAITCFQHDSRK--VIS-GSEKTVKMWDI 958
Query: 291 EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT-EADKTVKLYKEDDSATEESHP 344
+ ++ D SG++ + FD G R + + D + D A + P
Sbjct: 959 ATGEC-IEDLLTDL-SGVWQVKFD--GRRCVAAVQRDGLTYIEILDFGAVRDGKP 1009
Score = 97 (39.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
+R GH SV IS H D L++ D + RVW + T ++ L GH+ + SVV
Sbjct: 803 LRILQGHTHSVRAISAHA--DTLVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVV 857
Score = 82 (33.9 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 28 HY-HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHT 75
H+ GH V ++ L + I+ DS ++WD+ T A +YTL GH+
Sbjct: 844 HWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEGHS 892
Score = 76 (31.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWD+ G GH +VR L ++ + + P ++IT RDS RVW
Sbjct: 718 VWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPKPLIITGSRDSQLRVW 777
Query: 61 DV-RTKANVYTLTG 73
+ + Y TG
Sbjct: 778 RLPEAGSRRYIQTG 791
Score = 64 (27.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP-QVGTKT 94
+ L++ D + RVWD+ GHT+T+ + Q P +VG+ T
Sbjct: 705 NTLVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCL--QILMPTEVGSDT 752
Score = 55 (24.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
V+D TGKL+ L GH G V L
Sbjct: 678 VYDTNTGKLRQKLEGHEGGVWAL 700
Score = 44 (20.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 163 DMFISCQELVPSTENQLVPTTASN-TQIIQQAKAKALPM 200
++ +S Q + +TE +LV T N +Q + AK K PM
Sbjct: 523 ELDLSLQSRLTATEPELVKTAKPNASQRTRPAKRKR-PM 560
Score = 40 (19.1 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGH 74
D +IT D V+D T L GH
Sbjct: 665 DKIITGSDDQLIHVYDTNTGKLRQKLEGH 693
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 148 (57.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS--GHLGWVRCVAVEPG--NEWFA 235
V +A N QI+ ++ + + + W+ I+ GH WV CV P N
Sbjct: 111 VSFSADNRQIVSGSRDRTIKL----WNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIV 166
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
+ DK++KVW+LA+ +L+ GH G + +T+SP S G D WDL +K
Sbjct: 167 SAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESK 225
Score = 128 (50.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 215 ISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDL-----ATGKLKLSLTGHVGSVRGLT 268
+ GH GWV +A N +GS DK + +W+L A G K SL GH V
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+S Y S D++++ W+L + + + + S++F ++++ D+T
Sbjct: 71 ISSDGAYALSASWDKSLRLWEL--SSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRT 128
Query: 329 VKLY 332
+KL+
Sbjct: 129 IKLW 132
Score = 112 (44.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN--HKKSVRSVALHPTLY--MFASASP 392
S + ++ +++GS D TI+LW+ G T+T+ H + V V P + SA
Sbjct: 112 SFSADNRQIVSGSRDRTIKLWN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGW 170
Query: 393 DN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVL-VSGADNGTMCFWD 440
D +K W+ + + GH IN++ ++ +G L SG +G WD
Sbjct: 171 DKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/124 (24%), Positives = 47/124 (37%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS-VRGLTVSPRHPY 275
GH G++ V + P A+G D + +WDL K SL H G + L SP Y
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL--HAGDEIHALVFSPNR-Y 246
Query: 276 LFSCGDDRTVKCWDLEYNKA-----P--VQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
++ +DLE P ++ G E S+ + G L D
Sbjct: 247 WLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNK 306
Query: 329 VKLY 332
++ +
Sbjct: 307 IRAW 310
Score = 100 (40.3 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V + + + S DK +++W+L++G+ + GH V ++ S
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 273 HPYLFSCGDDRTVKCWD 289
+ + S DRT+K W+
Sbjct: 117 NRQIVSGSRDRTIKLWN 133
Score = 74 (31.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
H H+ S IS ++A D + R+W++ + T GHTN + SV A Q
Sbjct: 62 HSHIVSDCVISSDGAY--ALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQ 119
Query: 90 V 90
+
Sbjct: 120 I 120
Score = 74 (31.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGD-DRTVKCWDLEYNK-APVQPG-SMDSESGIF 309
L+ +L GH G V L S +P + G D+T+ W+L ++ A P S++ S I
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 310 S-MTFDNSGSRLITTEADKTVKLYKEDDSAT 339
S + G+ ++ DK+++L++ T
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQT 97
Score = 65 (27.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 343 HPVITGSH-DCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKC 400
+PVI + D +++W+LA+ + H + +V + P + AS D + W
Sbjct: 162 NPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDL 221
Query: 401 PEGKFIQNL 409
E K + +L
Sbjct: 222 NESKHLYSL 230
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 31 GHLSSVNTI--SLHPTIDVLITAGRDSTARVWDV---RTKANVYTLTGHTNTI 78
GH V+ + S +P V+++AG D +VW++ R + + TG+ NT+
Sbjct: 146 GHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTV 198
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/68 (26%), Positives = 37/68 (54%)
Query: 20 VRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVY-----TLTGH 74
+RG T+ H +G ++S+ T +P ++L++ RD T +W++ Y +L GH
Sbjct: 7 LRG-TLEGH-NGWVTSLATSLENP--NMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGH 62
Query: 75 TNTIASVV 82
++ ++ V
Sbjct: 63 SHIVSDCV 70
Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 70 TLTGHTNTIASVVTQASEPQV 90
TL GH + S+ T P +
Sbjct: 10 TLEGHNGWVTSLATSLENPNM 30
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 140 (54.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISG---HLGWVRCVAVEPGNEWFAT 236
V ++ N QII ++ + + W+ + + G H WV C+ P +
Sbjct: 118 VAFSSDNRQIISGSRDATIKV----WNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVS 173
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKC-WDLEYNKA 295
GS D +K+WD+ + K +LT H G V +T+SP S G D T C W+L K
Sbjct: 174 GSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKD-TFACLWELSSGK- 231
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
P+ +++ + I ++ F + L DK +
Sbjct: 232 PLY--KLEARNTINALAFSPNKYWLSAATDDKII 263
Score = 130 (50.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 304 SESGIFSMT--FDNSGSRLITTEADKTVKLYK---EDDSA---TEESHPVITGSHDCTIR 355
S G F+++ +DN+ RL + +L+K +D + + ++ +I+GS D TI+
Sbjct: 79 SHDGQFALSGSWDNT-LRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIK 137
Query: 356 LWDLAAGKSLCTLTN---HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPG 411
+W+ G+ TL H+ V + P S S DN +K W K L
Sbjct: 138 VWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTD 196
Query: 412 HNAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQVR 453
H +N++ ++ +G L SG + C W+ +G +L+ R
Sbjct: 197 HTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR 239
Score = 125 (49.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 204 QWHAPWKLYRVIS---GHLGWVRCVAVEPGN-EWFATGSADKIIKVWDL----AT--GKL 253
Q AP Y + GH G+V +AV P N + + S DK + VW L AT GK
Sbjct: 3 QQKAPQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKA 62
Query: 254 KLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTF 313
SL GH V+ + +S + S D T++ WD+ K + S+ F
Sbjct: 63 HRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDI--TKGVSTRLFKGHTQDVMSVAF 120
Query: 314 DNSGSRLITTEADKTVKLY 332
+ ++I+ D T+K++
Sbjct: 121 SSDNRQIISGSRDATIKVW 139
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 42/206 (20%), Positives = 89/206 (43%)
Query: 162 HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGW 221
H+ F++ + P + ++ ++ T ++ Q P +P K +R + GH +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLT----PTDAT---SPGKAHRSLKGHSHF 72
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V+ V + ++ +GS D +++WD+ G GH V + S + + S
Sbjct: 73 VQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSR 132
Query: 282 DRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE 340
D T+K W+ L K ++ G + + + F + +++ D VK++ D + +
Sbjct: 133 DATIKVWNTLGECKFTLE-GPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW--DIKSFK 189
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLC 366
+H +T H + ++ SLC
Sbjct: 190 CNH-TLT-DHTGYVNTVTISPDGSLC 213
Score = 116 (45.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIK-QWKCPEG 403
+++GS D +++WD+ + K TLT+H V +V + P + AS D W+ G
Sbjct: 171 IVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRT 443
K + L N I N++ + +S A + + WD T
Sbjct: 231 KPLYKLEARNTI-NALAFSPNKYWLSAATDDKIIIWDLLT 269
Score = 108 (43.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
+ +D + + ++GS D T+RLWD+ G S H + V SVA S S
Sbjct: 72 FVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGS 131
Query: 392 PD-NIKQWKC-PEGKFIQNLP-GHNAIINSICVN-NEGVLVSGADNGTMCFWD 440
D IK W E KF P H ++ I + N +VSG+ + + WD
Sbjct: 132 RDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWD 184
Score = 70 (29.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V + + ++ D+T R+WD+ + GHT + SV +
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 87 EPQV 90
Q+
Sbjct: 124 NRQI 127
Score = 67 (28.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 31 GHLSSVNTISLHP-TIDVLITAGRDSTARVW-----DVRTKANVY-TLTGHTNTIASVV 82
GH V +I++ P D +I++ RD T VW D + + +L GH++ + VV
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/73 (21%), Positives = 36/73 (49%)
Query: 21 RGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG---HTNT 77
+G++ R + GH V +++ +I+ RD+T +VW+ + +TL G H +
Sbjct: 101 KGVST-RLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECK-FTLEGPEAHQDW 158
Query: 78 IASVVTQASEPQV 90
++ + + P +
Sbjct: 159 VSCIRFSPNTPTI 171
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 183 (69.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 261 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 316
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 317 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 376
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 377 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 436
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 437 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 494
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 495 SSHDDTILIWDF 506
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 230 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 285
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 286 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 340
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 341 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 400
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 401 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 456
Score = 122 (48.0 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 265 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 319
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 320 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 373
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 374 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 431
Query: 452 -VRCV 455
VRC+
Sbjct: 432 LVRCI 436
Score = 60 (26.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 270
Score = 46 (21.3 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 251 IWDKTSLECLKVLTGHTGSV 270
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 183 (69.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 262 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 317
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 318 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 377
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 378 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 437
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 438 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 495
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 496 SSHDDTILIWDF 507
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 231 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 286
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 287 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 341
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 342 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 401
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 402 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 457
Score = 122 (48.0 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 266 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 320
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 321 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 374
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 375 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 432
Query: 452 -VRCV 455
VRC+
Sbjct: 433 LVRCI 437
Score = 60 (26.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 271
Score = 46 (21.3 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 252 IWDKTSLECLKVLTGHTGSV 271
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 164 (62.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 39/123 (31%), Positives = 58/123 (47%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
+ LYR H WVRC P + S DK IK+WD + + + VG +
Sbjct: 138 YSLYR----HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+P + S G D VK WD+ NK +Q + S G+ ++F G+ L+T +D T
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMNKL-LQHYQVHS-CGVNCLSFHPLGNSLVTASSDGT 251
Query: 329 VKL 331
VK+
Sbjct: 252 VKM 254
Score = 154 (59.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 55/200 (27%), Positives = 83/200 (41%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V + T S DK IKVW + + SL H VR SP +
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL------ 331
SC +D+T+K WD NK V S DS + F+ +G+ + + +D VK+
Sbjct: 161 SCSEDKTIKIWDTT-NKQCVNNFS-DSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN 218
Query: 332 -----YKEDDSATE--ESHPV----ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
Y+ HP+ +T S D T+++ DL G+ + TL H V +V+
Sbjct: 219 KLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSF 278
Query: 381 HPTLYMFASASPD-NIKQWK 399
+ S D + W+
Sbjct: 279 SKDGELLTSGGADAQVLIWR 298
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 54/227 (23%), Positives = 88/227 (38%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R GH + P + AT S D + +W L GH V L S
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P+ L S DRTV+ W L+ K + + + S+ F G L+T DK++K
Sbjct: 70 PQGNLLASASRDRTVRLWVLD-RKGKSSEFKAHT-APVRSVDFSADGQLLVTASEDKSIK 127
Query: 331 ------------LYKEDD-----SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
LY+ + + +++ S D TI++WD + + ++
Sbjct: 128 VWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 374 SVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
V +P ASA D+ +K W K +Q+ H+ +N +
Sbjct: 188 FANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCL 234
Score = 103 (41.3 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S +G+ V P A+ +D +K+WD+ KL H V L+ P
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS 242
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYK 333
L + D TVK DL + ++ +G +F+++F G L + AD V +++
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIY---TLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Score = 97 (39.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 210 KLYRVISGHLGWVRCVAVEP-GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
KL + H V C++ P GN T S+D +K+ DL G+L +L GH G V ++
Sbjct: 219 KLLQHYQVHSCGVNCLSFHPLGNS-LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS 277
Query: 269 VSPRHPYLFSCGDDRTVKCW 288
S L S G D V W
Sbjct: 278 FSKDGELLTSGGADAQVLIW 297
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
R + GH +++ + P + TA D+ +W ++ A Y GH + + S+
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Score = 78 (32.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
Y GH V ++ P ++L +A RD T R+W + K HT + SV
Sbjct: 56 YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Score = 68 (29.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+ H + V ++ +L+TA D + +VW + + +Y+L HT+ +
Sbjct: 98 FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWV 147
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 71/262 (27%), Positives = 118/262 (45%)
Query: 205 WHA-PWKLYRVISGHLGWV-RCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W+A P V+ GH V C+ + ++ TGS D +KVW + G++ +L GH G
Sbjct: 240 WNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTG 297
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
V +S Y+ S DRTVK W ++ + G S + M +GS L+
Sbjct: 298 GVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT---STVRCMAM--AGSILV 352
Query: 322 TTEADKTVKLYKEDDS---ATEESH------------PVITGSHDCTIRLWDLAAGKSLC 366
T D T++++ + AT H V++G +D T+++W+ G+ +
Sbjct: 353 TGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKC--PEGK-FIQNLPGHNAIINSICVN 422
TLT H V S+ + S S D +I+ W PEG+ + L GH ++ + + +
Sbjct: 413 TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR 472
Query: 423 NEGVLVSGADNGTMCFWDWRTG 444
+LVS + + WD G
Sbjct: 473 GN-ILVSCNADSHVRVWDIHEG 493
Score = 184 (69.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 63/252 (25%), Positives = 108/252 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
+Y ++ GH G V + + +GS D+ +KVW G L +L GH +VR + ++
Sbjct: 289 MYTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA 347
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNK---------APVQPGSMDSE---SGIFSMTFD--NS 316
L + D T++ WD+E + A V+ D SG + T N+
Sbjct: 348 GS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNA 405
Query: 317 GS-RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA--GKS-LCTLTNHK 372
+ R I T ++Y E V +GS D +IR+WD G+ + L H
Sbjct: 406 HTGRCIRTLTGHNNRVYSL--LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT 463
Query: 373 KSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD 432
+ L + + +A +++ W EG + L GH + I S+ ++ + +D
Sbjct: 464 SLTSGMQLRGNILVSCNAD-SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522
Query: 433 NGTMCFWDWRTG 444
+GT+ WD G
Sbjct: 523 DGTVKLWDIERG 534
Score = 146 (56.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/228 (26%), Positives = 99/228 (43%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L + GH VRC+A+ TGS D ++VWD+ +G+ +L GH +VR V
Sbjct: 330 LLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQ 385
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKA---------PVQPGSMDSESGIF-SMTFDNSGSRL 320
+ S G D TVK W+ + V +SE I S + D S
Sbjct: 386 FDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 321 ITT--EADKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
T E + V L + S T + +++ + D +R+WD+ G + L+ H+ +
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 375 VRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICV 421
+ S+ M A++S D +K W G I++L ++ N C+
Sbjct: 506 ITSLQWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCI 552
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
++TGS D T+++W + G+ + TL H V + + S S D +K W +G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ-----VRCV 455
+ L GH + + C+ G +LV+G+ + T+ WD +G + L VRCV
Sbjct: 329 SLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Score = 99 (39.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 10 KLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVY 69
K+ + + G V+R + H+ + + +H DVL+T D+T +VW + +Y
Sbjct: 235 KIEKNWNANPIMGSAVLRGHEDHV--ITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMY 290
Query: 70 TLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTA-GFLLSCL 117
TL GHT + + +Q S Q G + ++ S +R + V T G LL L
Sbjct: 291 TLVGHTGGVWT--SQIS--QCG-RYIVSGSTDRTVKVWSTVDGSLLHTL 334
Score = 46 (21.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVR 21
VW G L +L GH +VR
Sbjct: 322 VWSTVDGSLLHTLQGHTSTVR 342
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 71/262 (27%), Positives = 118/262 (45%)
Query: 205 WHA-PWKLYRVISGHLGWV-RCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W+A P V+ GH V C+ + ++ TGS D +KVW + G++ +L GH G
Sbjct: 240 WNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTG 297
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
V +S Y+ S DRTVK W ++ + G S + M +GS L+
Sbjct: 298 GVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT---STVRCMAM--AGSILV 352
Query: 322 TTEADKTVKLYKEDDS---ATEESH------------PVITGSHDCTIRLWDLAAGKSLC 366
T D T++++ + AT H V++G +D T+++W+ G+ +
Sbjct: 353 TGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 367 TLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKC--PEGK-FIQNLPGHNAIINSICVN 422
TLT H V S+ + S S D +I+ W PEG+ + L GH ++ + + +
Sbjct: 413 TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR 472
Query: 423 NEGVLVSGADNGTMCFWDWRTG 444
+LVS + + WD G
Sbjct: 473 GN-ILVSCNADSHVRVWDIHEG 493
Score = 184 (69.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 63/252 (25%), Positives = 108/252 (42%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
+Y ++ GH G V + + +GS D+ +KVW G L +L GH +VR + ++
Sbjct: 289 MYTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA 347
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNK---------APVQPGSMDSE---SGIFSMTFD--NS 316
L + D T++ WD+E + A V+ D SG + T N+
Sbjct: 348 GS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNA 405
Query: 317 GS-RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA--GKS-LCTLTNHK 372
+ R I T ++Y E V +GS D +IR+WD G+ + L H
Sbjct: 406 HTGRCIRTLTGHNNRVYSL--LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT 463
Query: 373 KSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD 432
+ L + + +A +++ W EG + L GH + I S+ ++ + +D
Sbjct: 464 SLTSGMQLRGNILVSCNAD-SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522
Query: 433 NGTMCFWDWRTG 444
+GT+ WD G
Sbjct: 523 DGTVKLWDIERG 534
Score = 146 (56.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/228 (26%), Positives = 99/228 (43%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L + GH VRC+A+ TGS D ++VWD+ +G+ +L GH +VR V
Sbjct: 330 LLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQ 385
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKA---------PVQPGSMDSESGIF-SMTFDNSGSRL 320
+ S G D TVK W+ + V +SE I S + D S
Sbjct: 386 FDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 321 ITT--EADKTVKLYKEDDSATE----ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
T E + V L + S T + +++ + D +R+WD+ G + L+ H+ +
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 375 VRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICV 421
+ S+ M A++S D +K W G I++L ++ N C+
Sbjct: 506 ITSLQWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCI 552
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
++TGS D T+++W + G+ + TL H V + + S S D +K W +G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ-----VRCV 455
+ L GH + + C+ G +LV+G+ + T+ WD +G + L VRCV
Sbjct: 329 SLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Score = 99 (39.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 10 KLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVY 69
K+ + + G V+R + H+ + + +H DVL+T D+T +VW + +Y
Sbjct: 235 KIEKNWNANPIMGSAVLRGHEDHV--ITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMY 290
Query: 70 TLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTA-GFLLSCL 117
TL GHT + + +Q S Q G + ++ S +R + V T G LL L
Sbjct: 291 TLVGHTGGVWT--SQIS--QCG-RYIVSGSTDRTVKVWSTVDGSLLHTL 334
Score = 46 (21.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVR 21
VW G L +L GH +VR
Sbjct: 322 VWSTVDGSLLHTLQGHTSTVR 342
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 183 (69.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 274 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 329
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 389
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 450 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 507
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 508 SSHDDTILIWDF 519
Score = 175 (66.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 243 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 298
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 299 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 353
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 354 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 413
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 414 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 469
Score = 122 (48.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 278 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 332
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 333 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 386
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 387 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 444
Query: 452 -VRCV 455
VRC+
Sbjct: 445 LVRCI 449
Score = 60 (26.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 283
Score = 46 (21.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 264 IWDKTSLECLKVLTGHTGSV 283
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 183 (69.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 274 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 329
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 389
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 390 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 450 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 507
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 508 SSHDDTILIWDF 519
Score = 175 (66.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 243 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 298
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + SAT+
Sbjct: 299 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASATDI 353
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 354 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 413
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 414 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 469
Score = 122 (48.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 278 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 332
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 333 -----MVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 386
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 387 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 444
Query: 452 -VRCV 455
VRC+
Sbjct: 445 LVRCI 449
Score = 60 (26.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 283
Score = 46 (21.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 264 IWDKTSLECLKVLTGHTGSV 283
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 61/252 (24%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+++G++ +L H +V L
Sbjct: 259 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC-- 314
Query: 273 HPYLFSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 315 NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 435 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 492
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 493 SSHDDTILIWDF 504
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 59/225 (26%), Positives = 102/225 (45%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA 295
+G D IK+WD + + LTGH GSV L R + + D TV+ WD+ +
Sbjct: 240 SGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVRVWDV--SSG 295
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEES-------HP---- 344
V + + + F N ++T D+++ ++ + SAT+ S H
Sbjct: 296 EVLNTLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVW-DMASATDISLRRVLVGHRAAVN 352
Query: 345 --------VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-I 395
+++ S D TI++W + + + TL HK+ + + L + S S DN I
Sbjct: 353 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVV--SGSSDNTI 410
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 454
Score = 117 (46.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ ++ SG L T L+ +
Sbjct: 263 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDVS---SGEVLNTLIHHNEAVLHLRFCNGL 317
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 318 -----MVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 371
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 372 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 452 -VRCV 455
VRC+
Sbjct: 430 LVRCI 434
Score = 66 (28.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
D +I+ RD++ ++WD ++ + LTGHT ++
Sbjct: 236 DKIISGLRDNSIKIWDKQSLECLKVLTGHTGSV 268
Score = 45 (20.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 249 IWDKQSLECLKVLTGHTGSV 268
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 173 (66.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 66/246 (26%), Positives = 108/246 (43%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG---KLKLSLTGHVGSVRGLTVS 270
V+ GH V+CVA P AT S DK + +W++ + + H V+ +
Sbjct: 100 VLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWH 159
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L SC D V + E + + S ++ +TFD SG RL + D+TVK
Sbjct: 160 PTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVK 219
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFAS 389
++KE P G D W K +CTL+ H ++V +A P A+
Sbjct: 220 IWKE-------CQP--GGGQDTA---W-----KCVCTLSGFHGRTVYDIAWCPLTGALAT 262
Query: 390 A-SPDNIKQWK--------CPEGKFIQNLP-GHNAIINSICVNNE--GVLVSGADNGTMC 437
A D ++ +K P ++P H+ +N I + + G+LVS +DNG +
Sbjct: 263 ACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIA 322
Query: 438 FWDWRT 443
W++++
Sbjct: 323 VWNYQS 328
Score = 137 (53.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 70/269 (26%), Positives = 115/269 (42%)
Query: 93 KTVLLESC--ERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSV 150
K LL SC +R + + G G C L D G R + ++ C L +
Sbjct: 27 KGTLLASCGGDRAIRIWGREGDSWECKTVLQD-GHQRAVR-KVAWSPCGNYLASASFDAT 84
Query: 151 HTLVFRSLKRTHDMFISCQELVPSTENQL--VPTTASNTQIIQQAKAKALPMPKPQWHAP 208
T ++ K+ +D F C ++ EN++ V S Q+ ++ K++ + +
Sbjct: 85 -TCIW---KKKNDDF-ECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDE 139
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG--KLKLSLTGHVGSVRG 266
++ V++ H V+ V P E A+ S D + V+ + + +L GH +V G
Sbjct: 140 YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWG 199
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMD---SESGIFSMT-FDNSG----S 318
LT P L SC DDRTVK W E Q + + SG T +D +
Sbjct: 200 LTFDPSGQRLASCSDDRTVKIWK-ECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTG 258
Query: 319 RLITTEADKTVKLYKEDDSATEESHPVIT 347
L T D V+++KED++A + PV +
Sbjct: 259 ALATACGDDGVRVFKEDETA-DPDQPVFS 286
Score = 61 (26.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK--ANVYTLTGHTNTIASVVTQASEP 88
GH +V ++ P + L +A D+T +W + + L GH N + V S
Sbjct: 59 GHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGN 118
Query: 89 QVGT 92
Q+ T
Sbjct: 119 QLAT 122
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 23 LTVIRHYHGHLSS-VNTISLHPTIDVLITAGRDSTARVW 60
L +++ ++ H S ++ +P +L + G D R+W
Sbjct: 5 LALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIW 43
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 182 (69.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+V++GH G V C+ + TGS+D ++VWD+ TG++ +L H +V L S
Sbjct: 247 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-- 302
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 303 NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 362
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 363 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 422
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 423 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 480
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 481 SSHDDTILIWDF 492
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/239 (25%), Positives = 106/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 216 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 271
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N V + + + F N ++T D+++ ++ + S T+
Sbjct: 272 DSTVRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASPTDI 326
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 327 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 386
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 387 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 442
Score = 120 (47.3 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ +
Sbjct: 251 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NTGEVLNTLIHHNEAVLHLRFSNGL 305
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 306 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 359
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 360 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 417
Query: 452 -VRCV 455
VRC+
Sbjct: 418 LVRCI 422
Score = 60 (26.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 256
Score = 46 (21.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 237 IWDKTSLECLKVLTGHTGSV 256
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 142 (55.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 50/193 (25%), Positives = 83/193 (43%)
Query: 141 NLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPM 200
NL EVQ HT L D + CQ +E + T A++ + +++ P+
Sbjct: 203 NLSEVQLFRGHTDRVSGL----DWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPL 258
Query: 201 PKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGH 260
+ + GHL V VA P ++ + S D ++WD+ TG L GH
Sbjct: 259 LR------------LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGH 306
Query: 261 VGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSR 319
+ + P + S G+D + WDL K+ + +D I +M + +G +
Sbjct: 307 SEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMV---LDEHIRQIVAMAWSPNGYQ 363
Query: 320 LITTEADKTVKLY 332
L T+ AD TVK++
Sbjct: 364 LATSSADDTVKIW 376
Score = 129 (50.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
V +G +D R+WDL +GKS+ L H + + ++A P Y A++S D+ +K W +
Sbjct: 322 VSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381
Query: 404 KFIQNLPGHNAIINSICVNNEGV----LVSGADNGTMCFWD 440
+P H+++++ + GV SG D G + W+
Sbjct: 382 SLAHTIPAHSSLVSDVRYIESGVNRFIATSGYD-GCVKLWN 421
Score = 127 (49.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 50/223 (22%), Positives = 91/223 (40%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYN- 293
ATG+AD + +W + L L GH+ V + P YL S D T + WD+
Sbjct: 239 ATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGV 298
Query: 294 KAPVQPGSMDS--------ESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA------T 339
+ +Q G + + + S +++ R+ + K++ + E +
Sbjct: 299 ELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWS 358
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA-LHPTLYMF-ASASPDN-IK 396
+ + T S D T+++WDL T+ H V V + + F A++ D +K
Sbjct: 359 PNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVK 418
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFW 439
W I+++ GH + S+ + + SG D T+ W
Sbjct: 419 LWNPLNCSLIKSMVGHEEKVMSVDGYGDRFISSGYDR-TIKLW 460
Score = 122 (48.0 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH + +A +P ++G D I ++WDL +GK + L H+ + + SP L
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 277 FSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSG-SRLITTEA-DKTVKLY 332
+ D TVK WDL K + ++ + S + S + + SG +R I T D VKL+
Sbjct: 365 ATSSADDTVKIWDLR--KVSLAH-TIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLW 420
Score = 119 (46.9 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 36/109 (33%), Positives = 47/109 (43%)
Query: 338 ATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-K 396
A E + TG+ D T+ LW + L L H V VA HP+ SAS D +
Sbjct: 231 ADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWR 290
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMC-FWDWRTG 444
W G + GH+ I SI +G LVS N + WD R+G
Sbjct: 291 LWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSG 339
Score = 117 (46.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGH---VGSVRG 266
K V+ H+ + +A P AT SAD +K+WDL L ++ H V VR
Sbjct: 340 KSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRY 399
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
+ S + ++ + G D VK W+ N + ++ + E + S+ D G R I++ D
Sbjct: 400 IE-SGVNRFIATSGYDGCVKLWN-PLNCSLIK-SMVGHEEKVMSV--DGYGDRFISSGYD 454
Query: 327 KTVKLY 332
+T+KL+
Sbjct: 455 RTIKLW 460
Score = 115 (45.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 2 WDLATGKLKLSLTGHVGSVRGL------TVIRHYHGHLSSVNTISLHPTIDVLITAGRDS 55
WD + +L L+ TG + L T + GHL+ V ++ HP+ D L++A D+
Sbjct: 229 WDADSEQLTLA-TGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 56 TARVWDVRTKANVYTLTGHTNTIASVVTQ 84
T R+WDV T + GH+ I S+ Q
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQ 316
Score = 50 (22.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 214 VISGHLGWVRCVAV----EPGNEWFATGSADKIIKVWDLAT-GKLKLSLTGHVGSVRGLT 268
++ +G R +A+ GN FA+GS +KVW+ +++L GH V GL
Sbjct: 164 LMGSQIGGERPIAIVRFSNNGNH-FASGSWGGQVKVWNSDNLSEVQL-FRGHTDRVSGLD 221
Query: 269 VSP 271
P
Sbjct: 222 WYP 224
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 15/73 (20%), Positives = 26/73 (35%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDV---------LITAGRDSTARVWDVRTKANVYTLTG 73
L+ ++ + GH V+ + +P L T D+T +W + L G
Sbjct: 204 LSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEG 263
Query: 74 HTNTIASVVTQAS 86
H + V S
Sbjct: 264 HLARVGRVAFHPS 276
Score = 44 (20.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 285 VKCWDLEYNKAPVQ--PGSMDSESGI----FSMTFDNSGSRLI--TTEADKTVKLYKEDD 336
VK W+ + N + VQ G D SG+ +D +L T AD TV L+K
Sbjct: 196 VKVWNSD-NLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQ 254
Query: 337 S 337
S
Sbjct: 255 S 255
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 58 RVWDVRTKANVYTLTGHTNTIASV 81
+VW+ + V GHT+ ++ +
Sbjct: 197 KVWNSDNLSEVQLFRGHTDRVSGL 220
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 149 (57.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 167 SCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVA 226
S E +PS + P+ + +I+++ L + P R + H + +
Sbjct: 273 SIYEKIPSAAS--TPSKSRKPRIVRRKSMAVLH----EHFEPGTSIRELRAHQDCITAMD 326
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
+ + + D +KVWDL G+ SL GH SVR L V L + D TV+
Sbjct: 327 FDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQVEDN--ILATGSRDATVR 384
Query: 287 CWDLEYNKAPVQP-GSM--DSESGIFSMTFDNSGSRLITTEADK-------TVKLYKEDD 336
WDL +KA P GS + +M F+N + + A T+ + ++
Sbjct: 385 LWDL--SKAHYDPHGSHYNGGDDDDDAMAFENPDDQPVDPPAGSMADCPLFTLSSHMDEV 442
Query: 337 SATE-ESHPVITGSHDCTIRLWDLAAGKSLCTL 368
+A + +++GS D TIR WDL G+ + TL
Sbjct: 443 TALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL 475
Score = 129 (50.5 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 226 AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTV 285
AV+ + A G+AD ++++WDL +G++ +L GH G V L H L + DR++
Sbjct: 511 AVQVFDAALACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQFDNMH--LVTGSHDRSI 568
Query: 286 KCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDS 337
+ WDL + D + SM FD R+++ + VK+Y + +S
Sbjct: 569 RIWDLRTGSI-FDAFAYDHP--VTSMMFD--ARRIVSAAGEDVVKVYDKVES 615
Score = 105 (42.0 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 52/235 (22%), Positives = 96/235 (40%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH VR + VE + ATGS D +++WDL+ K H G
Sbjct: 357 LEGHTASVRALQVE--DNILATGSRDATVRLWDLS----KAHYDPHGSHYNGGD-DDDDA 409
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
F DD+ V P+ S + + ++ F G L++ +DKT++ +
Sbjct: 410 MAFENPDDQPVDPPAGSMADCPLFTLSSHMDE-VTALHF--KGDTLVSGSSDKTIRQWDL 466
Query: 335 DDSATEESHPVITGSHDCTIRLW--DLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASP 392
++ V+ + ++ L D A ++ + V +V + +A
Sbjct: 467 VKGRCVQTLDVMWAAAQASVSLGTGDGAWRQTARSQAEDADFVGAVQVFDAALACGTAD- 525
Query: 393 DNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNF 447
++ W G+ +NL GH + ++ +N LV+G+ + ++ WD RTG F
Sbjct: 526 GMVRLWDLRSGQVHRNLVGHTGPVTALQFDNMH-LVTGSHDRSIRIWDLRTGSIF 579
Score = 98 (39.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIK-------- 396
++TGSHD +IR+WDL G S+ + V S+ + + ++A D +K
Sbjct: 559 LVTGSHDRSIRIWDLRTG-SIFDAFAYDHPVTSM-MFDARRIVSAAGEDVVKVYDKVESR 616
Query: 397 QWKCPEG-KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFW 439
QW C G K + + AI+ + + +G +V G +G + W
Sbjct: 617 QWDCGAGIKAAEEMKNPPAIVERVRIR-DGYMVEGRRDGIVGIW 659
Score = 79 (32.9 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
T IR H + + L++A D + +VWD+ + +L GHT ++ ++
Sbjct: 310 TSIRELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQV 369
Query: 84 QASEPQVGTK 93
+ + G++
Sbjct: 370 EDNILATGSR 379
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
GH +SV + + I L T RD+T R+WD+ +KA+ H N
Sbjct: 359 GHTASVRALQVEDNI--LATGSRDATVRLWDL-SKAHYDPHGSHYN 401
Score = 64 (27.6 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
VWDL G+ SL GH SVR L V
Sbjct: 345 VWDLNAGRCIGSLEGHTASVRALQV 369
Score = 54 (24.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 46 DVLITAGR-DSTARVWDVRTKANVYTLTGHTNTIASV 81
D + G D R+WD+R+ L GHT + ++
Sbjct: 516 DAALACGTADGMVRLWDLRSGQVHRNLVGHTGPVTAL 552
Score = 53 (23.7 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL 71
H+ V +LH D L++ D T R WD+ V TL
Sbjct: 438 HMDEVT--ALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL 475
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 114/472 (24%), Positives = 188/472 (39%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWDL K +L H +VRGL +I S+N L++ GRD +W
Sbjct: 174 VWDLVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLN----------LLSGGRDDIINLW 223
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGT-KTVLLESCERIMFVL--GTAGFLLSC- 116
D K L T + V + G K ++ + +F L +G +L
Sbjct: 224 DFNMKKKCKLLK--TLPVNQQVESCGFLKDGDGKRIIYTAGGDAIFQLIDSESGSVLKRT 281
Query: 117 ---LPSLLDFGTI----RPWQLQIIQEQCF--LNLQEVQRHSVHTL-VFRSLKRTHDMFI 166
+ L G + ++ +Q +N++E ++ T+ V S+ H +
Sbjct: 282 NKPIEELFIIGVLPILSNSQMFLVLSDQTLQLINVEEDLKNDEDTIQVTSSIAGNHGIIA 341
Query: 167 SCQELVPSTENQLVPTTASNTQIIQQAKAKALP-MPKPQWHAPWKLYRVISGHLGWVRCV 225
+ + P + T + + +II +P + P+ P + + GH + +
Sbjct: 342 DMRYVGPELNKLALATNSPSLRIIP------VPDLSGPEASLPLDV-EIYEGHEDLLNSL 394
Query: 226 -AVEPGNEWFATGSADKIIKVWDLATGKLKLSL----TGHVGSVR--GLT--VSPRHP-Y 275
A E G W AT S D VW K + GH +V GL VS +P +
Sbjct: 395 DATEDGL-WIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIVSKGYPEF 453
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
L + +D T+K W + P SMD + I ++ + E D +
Sbjct: 454 LLTASNDLTIKKWII-----PKPTASMDVQ--IIKVSEYTRHAH----EKDINALSVSPN 502
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN- 394
DS T S+D T ++W+L G+ TL NHK+ + V+ + A++S D
Sbjct: 503 DSI------FATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKT 556
Query: 395 IKQWKCPEGKFIQNLPGH-NAIINSICVNNEGVLVS-GADNGTMCFWDWRTG 444
+K W ++ L GH NA+ +N + L+S GAD G + WD +G
Sbjct: 557 VKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGAD-GLIKIWDCSSG 607
Score = 137 (53.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 183 TASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS----GHLGWVRCVAVEPGNEWFATGS 238
TASN I K +PKP ++ +V H + ++V P + FAT S
Sbjct: 456 TASNDLTI-----KKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFATAS 510
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPV 297
DK K+W+L G+L+ +L H + ++ L + D+TVK W L+ ++
Sbjct: 511 YDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKT 570
Query: 298 QPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLW 357
G ++ + +F N +LI+ AD +K++ D ++ E + G ++ RLW
Sbjct: 571 LEGHTNA---VQRCSFINKQKQLISCGADGLIKIW---DCSSGECLKTLDGHNN---RLW 621
Query: 358 DLA 360
L+
Sbjct: 622 ALS 624
Score = 131 (51.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
AT S DK +K+W L T + +L GH +V+ + + L SCG D +K WD +
Sbjct: 549 ATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGE 608
Query: 295 APVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKE 334
++D + +++++ N G +++ +AD + +K+
Sbjct: 609 CLK---TLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKD 646
Score = 129 (50.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 59/236 (25%), Positives = 95/236 (40%)
Query: 211 LYRVISGHLGWVRCVA----VEPGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
+Y GH V V V G E+ T S D IK W + K S+ + V
Sbjct: 426 IYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIP--KPTASMDVQIIKVS 483
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
T RH + ++ + + N + S D I+++ +N L T A
Sbjct: 484 EYT---RHAH------EKDINALSVSPNDSIFATASYDKTCKIWNL--ENG--ELEATLA 530
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
+ L+ D S + + T S D T+++W L + TL H +V+ +
Sbjct: 531 NHKRGLW--DVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQK 588
Query: 386 MFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFW 439
S D IK W C G+ ++ L GHN + ++ N+G ++ AD +G FW
Sbjct: 589 QLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFW 644
Score = 64 (27.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V D+ G + S GH G++ L ++G L+S I +L + + +VW
Sbjct: 128 VVDIENGYITHSFKGHGGTISSLK----FYGQLNS--------KIWLLASGDTNGMVKVW 175
Query: 61 DVRTKANVYTLTGHTNTI 78
D+ + ++TL HT+ +
Sbjct: 176 DLVKRKCLHTLQEHTSAV 193
Score = 47 (21.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 44 TIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLES 99
T +L G D + V D+ ++ GH TI+S+ Q+ +K LL S
Sbjct: 113 TSTLLAVGGTDGSIIVVDIENGYITHSFKGHGGTISSLKFYG---QLNSKIWLLAS 165
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 185 (70.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ G++ +L H +V L +
Sbjct: 337 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-- 392
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 393 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 453 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 513 RFD-NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 570
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 571 SSHDDTILIWDF 582
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 306 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 361
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 362 DSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 416
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 417 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 476
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 477 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 532
Score = 119 (46.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 341 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NAGEMLNTLIHHCEAVLHLRFNNGM 395
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 396 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 449
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 452 -VRCV 455
VRC+
Sbjct: 508 LVRCI 512
Score = 58 (25.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 327 IWDKSTLECKRILTGHTGSV 346
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 185 (70.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ G++ +L H +V L +
Sbjct: 337 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-- 392
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 393 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 453 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 513 RFD-NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 570
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 571 SSHDDTILIWDF 582
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 60/239 (25%), Positives = 110/239 (46%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD +T + K LTGH GSV L R + +
Sbjct: 306 VYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSS 361
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 362 DSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 416
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 417 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 476
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 477 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 532
Score = 119 (46.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 341 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NAGEMLNTLIHHCEAVLHLRFNNGM 395
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 396 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 449
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 452 -VRCV 455
VRC+
Sbjct: 508 LVRCI 512
Score = 58 (25.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD +T + K LTGH GSV
Sbjct: 327 IWDKSTLECKRILTGHTGSV 346
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 203 (76.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 72/244 (29%), Positives = 114/244 (46%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V+SGH V C+ + A+GS D I++W+LAT + L GH V L
Sbjct: 268 VLSGHSDGVMCLQLV--RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK 325
Query: 274 PYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL- 331
L S D+T++ W+ ++ + G DS + +TFD++ L++ AD TVKL
Sbjct: 326 --LISGSMDKTIRIWNYRTSECISILHGHTDS---VLCLTFDST--LLVSGSADCTVKLW 378
Query: 332 -YKEDDSATEESH--PV------------ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
+ T H PV ++GS D TI++W L L T + H V+
Sbjct: 379 HFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQ 438
Query: 377 SVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTM 436
S+AL + +F+ + IKQW + K + L GH + I ++ L+SGA +G +
Sbjct: 439 SLALADSR-LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLR-LISGAHDGVV 496
Query: 437 CFWD 440
W+
Sbjct: 497 KVWE 500
Score = 159 (61.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 61/248 (24%), Positives = 104/248 (41%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W+ A ++ ++ GH V C+ + +GS DK I++W+ T + L GH S
Sbjct: 298 WNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDS 355
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK--------APVQPGSMDSESGIFSMTFDN 315
V LT L S D TVK W K PV + + G+ D+
Sbjct: 356 VLCLTFDST--LLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDD 413
Query: 316 SGSRLITTEADKTVKLYKED----DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNH 371
S ++ + E + + + S + + S D TI+ WD+ K + TL H
Sbjct: 414 STIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGH 473
Query: 372 KKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
+ V +A L + + A +K W+ E + L H+ + S+ + + V VSG+
Sbjct: 474 IEGVWEIAADH-LRLISGAHDGVVKVWEACE--CVHTLKNHSEPVTSVALGDCEV-VSGS 529
Query: 432 DNGTMCFW 439
++G + W
Sbjct: 530 EDGKIYLW 537
Score = 150 (57.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 57/234 (24%), Positives = 102/234 (43%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
WH + GH G V V + +GS D IK+W L T + + H+G V
Sbjct: 378 WHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV 437
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITT 323
+ L ++ LFSC D T+K WD+E K G ++ G++ + D+ RLI+
Sbjct: 438 QSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIE---GVWEIAADHL--RLISG 490
Query: 324 EADKTVKLYKEDDSA-TEESH--PVITGS-HDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
D VK+++ + T ++H PV + + DC + + GK L N+ + V+
Sbjct: 491 AHDGVVKVWEACECVHTLKNHSEPVTSVALGDCEV-VSGSEDGKIYLWLFNNAPNESPVS 549
Query: 380 LHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADN 433
+ N + + ++P +++ +++I N + S A+N
Sbjct: 550 TQSVPISSLNGQRSNSSVQRA-----LSSVPNYSSSLSNISTRNLNIPPSNANN 598
Score = 139 (54.0 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGK 404
+I+GS D TIR+W+ + + L H SV + TL + SA +K W GK
Sbjct: 326 LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADC-TVKLWHFSGGK 384
Query: 405 FIQNLPGHNAIINSI-CVNNEGVLVSGADNGTMCFWDWRT 443
I L GH +NS+ + + G+++SG+D+ T+ W T
Sbjct: 385 RI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLET 423
Score = 74 (31.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH S V + LI+ D T R+W+ RT + L GHT+++
Sbjct: 311 GHSSGVTCLQFDQC--KLISGSMDKTIRIWNYRTSECISILHGHTDSV 356
Score = 74 (31.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
HGH SV ++ T+ L++ D T ++W + TL GHT + SV
Sbjct: 350 HGHTDSVLCLTFDSTL--LVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSV 398
Score = 62 (26.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH V + L ++L + D+T R+W++ T V L GH++ +
Sbjct: 271 GHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSGV 316
Score = 38 (18.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 14/74 (18%), Positives = 30/74 (40%)
Query: 33 LSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGT 92
+S+ N S+H + L R VW ++A+ + + ++ S +
Sbjct: 40 VSAFNISSMHNELSGLSEKSRQRVEAVWAAFSEASC---SERKLALQGILNNCSSSLLSF 96
Query: 93 KTVLLESCERIMFV 106
+ L+S R+ F+
Sbjct: 97 ASSTLDSLVRLDFL 110
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 172 (65.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 62/242 (25%), Positives = 105/242 (43%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K +V+ GH V V V + +GS DK +WDL + LTGH G + + +
Sbjct: 415 KRAQVLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVAL 474
Query: 270 SPRHP----YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
P+ P + + DDRT+K W ++ + S G S D S +T A
Sbjct: 475 -PKKPSTSMFAITASDDRTIKLWK-GFS-------TTSSSGGDDSKKKDKKISASVTKIA 525
Query: 326 DKTVKLYKEDDSATEESHPVI--TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
+ K+ +S + + I T S D ++LW++ + + ++ H++ V V P
Sbjct: 526 HE-----KDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPI 580
Query: 384 LYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDW 441
F + S D IK W + ++ L GH + + G+ +VS A G + W+
Sbjct: 581 DQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNI 640
Query: 442 RT 443
+T
Sbjct: 641 KT 642
Score = 119 (46.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 45/208 (21%), Positives = 86/208 (41%)
Query: 162 HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISG---- 217
H ISC L + TAS+ + I+ K + + K ++ +
Sbjct: 465 HTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKI 524
Query: 218 -HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
H + +++ P ++ FAT S D +K+W++ + S+ H V + SP
Sbjct: 525 AHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCF 584
Query: 277 FSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
+C D T+K W L +Y G S + +F + G ++++ ++ +KL+
Sbjct: 585 LTCSADGTIKIWSLSDYTCLKTLEGHKGS---VLKASFISFGMQIVSVASEGLIKLW--- 638
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGK 363
+ T E G H+ ++W L+ K
Sbjct: 639 NIKTNECLNTFEG-HES--KIWALSVAK 663
Score = 88 (36.0 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH V ++ + +I+ RD +A +WD+ K ++ LTGHT I+ V
Sbjct: 422 GHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCV 472
Score = 76 (31.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
++++ + GH +N I +H + +++ +A D T +VWD+
Sbjct: 120 SLVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDL 158
Score = 75 (31.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 28 HYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H H V + HPT+ L+T D RV+D+ TK V LT H + I+ +
Sbjct: 165 HNFQHDDVVTMLKFHPTLLKLVTVCLDLNIRVYDLVTKECVI-LTNHLSQISGI 217
Score = 67 (28.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASE 87
HLS ++ I+ + LI++GRD VWD+ +K T+ + + ++T E
Sbjct: 210 HLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTIPIYQE-LGGIITLPKE 264
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 161 (61.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 59/236 (25%), Positives = 107/236 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLKLSL--TGHVGSVRGLTV 269
+++ GH V + V FA+ + D+ I++W + G++ +GH SV +
Sbjct: 370 QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICC 429
Query: 270 SP-RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
S + +L + D TVK W L P ++ S++ S LI +A T
Sbjct: 430 SRLKESFLVTGSQDCTVKLWPL--------PEALPSKNTA-------SDGDLIPLQAQST 474
Query: 329 VKLYKEDDS--ATEESHPVI-TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
+ + +D + A + ++ TGS D T +LW L + L + H++ + +V PT
Sbjct: 475 QRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQ 534
Query: 386 MFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFW 439
+ A+AS D IK W + ++ GH+A + + + G L+S +G + W
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLW 590
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 156 RSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVI 215
+S +R HD I+ L S ++L+ T + + + AK ALP +L V
Sbjct: 472 QSTQRCHDKDIN--SLAVSPNDKLLATGSQD----RTAKLWALPQ--------CQLLGVF 517
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SGH + V P ++ AT SAD IK+W L + GH SV + R
Sbjct: 518 SGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQ 577
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
L S G D +K W ++ N+ V+ ++D+ E ++ + IT +D + L+K+
Sbjct: 578 LLSSGSDGLLKLWTIKSNEC-VR--TLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKD 634
Query: 335 DDSATE 340
A +
Sbjct: 635 VTEAEQ 640
Score = 93 (37.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 40/152 (26%), Positives = 68/152 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
+ +AV P ++ ATGS D+ K+W L +L +GH + + SP L +
Sbjct: 482 INSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASA 541
Query: 282 DRTVKCWDLE-YNKAPVQPGSMDSESGIFSMTFD----NSGS----RLITTEADKTVK-L 331
D T+K W L+ ++ G S + ++ +SGS +L T ++++ V+ L
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTL 601
Query: 332 YKEDDS------ATEESHPVITGSHDCTIRLW 357
+D + + H ITG D I LW
Sbjct: 602 DAHEDKVWGLHCSRLDDH-AITGGSDSRIILW 632
Score = 86 (35.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 5 ATGKLKLSLTGHVGSVRGLTVIRHY---H--GHLSSVNTISLHP--TIDVLITAGRDSTA 57
AT L L+ G G+VR +++HY H G V+ ++ HP T +L ++ D++
Sbjct: 119 ATSTL-LATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSI 177
Query: 58 RVWDVRTKANVYTLTGHTNTIASV 81
RVW ++ ++ + LT H + + S+
Sbjct: 178 RVWSLQDRSCLAVLTAHYSAVTSL 201
Score = 67 (28.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
H S+V ++S ++++GRD VWD+R+ T+ + ASV+ EP
Sbjct: 194 HYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLP-EEP 249
Score = 61 (26.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 24 TVIRHYHG-HLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
TV R + H + V +++ T +L T G D RVWD+
Sbjct: 99 TVARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Score = 54 (24.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL---TGHTNTIASV 81
HGH V + + + + +D + R+W + V + +GHT+++ ++
Sbjct: 373 HGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTI 427
Score = 53 (23.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVR--TKANVYTLTGHTNTIASVVTQASEPQVGT 92
+ L P +VL+TA R W R T A ++ HT +AS+ A+ + T
Sbjct: 69 ITAFDLSPDDEVLVTASRALLLAQWAWREGTVARLWKAI-HTAPVASMAFDATSTLLAT 126
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 31 GHLSSVNTISLHPTID-VLITAGRDSTARVW 60
GH SV TI + L+T +D T ++W
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Score = 47 (21.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 1 VWDLATGKLKLSLTGHV-GSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
VWDL + + S T V SV ++ V LH +TAG RV
Sbjct: 221 VWDLRS--YETSRTVPVFESVEASVLLPEEPALALGVKNSGLH-----FLTAGDQGILRV 273
Query: 60 WDVRTKANVYT 70
W+ + VYT
Sbjct: 274 WEAASGQCVYT 284
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 143 (55.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 43/129 (33%), Positives = 65/129 (50%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLATGKLKLSLTGH---VGSV 264
W +V GH +V +A P + FAT S DK +KVW + + +L GH + SV
Sbjct: 133 WSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSV 192
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
+ + PYL S DD+ VK WD + +K VQ +++ S S+ + LI +
Sbjct: 193 EYFSGGEK-PYLISGADDKLVKIWDYQ-SKTCVQ--TLEGHSNNVSVVCYHPELPLILSG 248
Query: 325 A-DKTVKLY 332
+ D TVKL+
Sbjct: 249 SEDGTVKLW 257
Score = 128 (50.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 232 EWFATGSADKIIKVWDLAT-GKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDL 290
+W TGS D I+V++ T K+K S H +R + V P PY+ S DD +K WD
Sbjct: 71 QWIVTGSDDTYIRVYNYNTMEKIK-SFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 291 EYNKAPVQPGSMDSESGIFSMTFD-NSGSRLITTEADKTVKLY 332
E + Q S + S+ ++ ++ T DKTVK++
Sbjct: 130 EKGWSNTQVFEGHSHY-VMSIAWNPKDTNQFATASLDKTVKVW 171
Score = 124 (48.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-TGHVGSVRGLTVSPRHPYL 276
H ++RC+ V P + + S D IK+WD G + GH V + +P+
Sbjct: 99 HADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQ 158
Query: 277 FSCGD-DRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSR--LITTEADKTVKLY 332
F+ D+TVK W + +P +++ E GI S+ + + G + LI+ DK VK++
Sbjct: 159 FATASLDKTVKVWSIN---SPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIW 215
Score = 123 (48.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP---TLYMFASASPDNIK 396
++++ T S D T+++W + + TL H+K + SV Y+ + A +K
Sbjct: 154 KDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVK 213
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRTGYNFQR 449
W +Q L GH+ ++ +C + E +++SG+++GT+ W T Y +R
Sbjct: 214 IWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSST-YRLER 266
Score = 122 (48.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 58/265 (21%), Positives = 108/265 (40%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNT-------IAS---VVTQA 85
V ++ +HPT ++ + D +W+ T+ V + N IA +VT +
Sbjct: 18 VKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGS 77
Query: 86 SEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEV 145
+ + + + E+I A ++ C+ + T+ P+ L + F+ L +
Sbjct: 78 DDTYI--RVYNYNTMEKIKSFEAHADYI-RCI---IVHPTL-PYILSS-SDDMFIKLWDY 129
Query: 146 QRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQW 205
++ +T VF H ++ P NQ TAS + + K ++ P P +
Sbjct: 130 EKGWSNTQVFEG----HSHYVMSIAWNPKDTNQFA--TASLDKTV---KVWSINSPHPHF 180
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNE--WFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
+ GH + V G E + +G+ DK++K+WD + +L GH +
Sbjct: 181 --------TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNN 232
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCW 288
V + P P + S +D TVK W
Sbjct: 233 VSVVCYHPELPLILSGSEDGTVKLW 257
Score = 116 (45.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 38/115 (33%), Positives = 56/115 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTL-TNHKKSVRSVALHPT-LYMFASASPDN-IKQWKC- 400
+++ S D I+LWD G S + H V S+A +P FA+AS D +K W
Sbjct: 115 ILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSIN 174
Query: 401 -PEGKFIQNLPGHNAIINSICVNNEG---VLVSGADNGTMCFWDWRTGYNFQRLQ 451
P F L GH INS+ + G L+SGAD+ + WD+++ Q L+
Sbjct: 175 SPHPHF--TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLE 227
Score = 92 (37.4 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEG 403
+I+G+ D +++WD + + TL H +V V HP L + S S D +K W
Sbjct: 203 LISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTY 262
Query: 404 KFIQNLP-GHNAIINSICVNNEGVLVSGADNGTM 436
+ + L G + + + + G D+GT+
Sbjct: 263 RLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTV 296
Score = 79 (32.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK-ANVYTLTGHTNTIASV 81
I+ + H + I +HPT+ ++++ D ++WD +N GH++ + S+
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSI 149
Score = 55 (24.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 25/129 (19%), Positives = 50/129 (38%)
Query: 253 LKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT 312
+K L+ V+ + + P P++ + D V W+ E V+ + + + +
Sbjct: 7 IKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNM-VKSFEVSPNNPVRTAR 65
Query: 313 FDNSGSRLITTEADKTVKLYKEDDSATEES-------------HP----VITGSHDCTIR 355
F ++T D +++Y + +S HP +++ S D I+
Sbjct: 66 FIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIK 125
Query: 356 LWDLAAGKS 364
LWD G S
Sbjct: 126 LWDYEKGWS 134
Score = 48 (22.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 425 GVLVSGADNGTMCFWDWRTGYNFQRLQ 451
G L+ N T+CF+ W + +R++
Sbjct: 437 GSLLGVKSNDTLCFYSWDSADIIRRIE 463
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/209 (28%), Positives = 96/209 (45%)
Query: 238 SADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAP 296
S D + ++ D T +LK+ L GH G V G + SP YL SC +D TV+ W L+
Sbjct: 500 SDDVLERIMDEKTASELKI-LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCL 558
Query: 297 V-QPGS----MDSESGIFSMTFDNSG----SRLITTEADKTVKLYKED--DSATEESHP- 344
V G D++ + F + G +RL T+ + ++++ D HP
Sbjct: 559 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN 618
Query: 345 ---VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
+ TGS D T+RLWD+ G + T HK + S+A P A+ + D + W
Sbjct: 619 SNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Query: 401 PEGKFIQNLPGHNAIINSICVNNEGVLVS 429
G + L GH I ++ + +G +++
Sbjct: 679 GHGLMVGELKGHTDTIYALRFSRDGEILA 707
Score = 181 (68.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V C P + + ATGSAD+ +++WD+ G TGH G + L SP
Sbjct: 601 RIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN 660
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
+L + D V WD+ + + G + + I+++ F G L + D TV+L
Sbjct: 661 GRFLATGATDGRVLLWDIGHG---LMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL 717
Query: 332 Y 332
+
Sbjct: 718 W 718
Score = 145 (56.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 342 SHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKC 400
S+ + TGS D T+RLWD+ G + T HK + S+A P A+ + D + W
Sbjct: 619 SNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
G + L GH I ++ + +G +L SG+ + T+ WD
Sbjct: 679 GHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 51/238 (21%), Positives = 89/238 (37%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
Y ++ + G + V + + G AD ++VW + KL+ S+ + L
Sbjct: 444 YTFLNAYQG-LTAVDITDDSSMIVGGFADSTVRVWSVTPKKLR-SVKA--AADLSLIDKE 499
Query: 272 RHPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
L D++T + Y + PV S + ++ RL + + +
Sbjct: 500 SDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLV 559
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
YK D + + ++G HD RLW + L H V HP
Sbjct: 560 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 619
Query: 385 YMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWD 440
A+ S D ++ W G ++ GH I+S+ + G L +GA +G + WD
Sbjct: 620 NYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWD 677
Score = 126 (49.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GH G + +A P + ATG+ D + +WD+ G + L GH ++ L S
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRD 702
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
L S D TV+ WD ++ + +G ++ +NS L+ T K+
Sbjct: 703 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLP-ENSQDLLLGTYMTKS 757
Score = 96 (38.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+R + GHL+ V HP + + T D T R+WDV V TGH I S+
Sbjct: 600 LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 655
Score = 64 (27.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
+GH V S P + L++ D T R+W ++T + GH
Sbjct: 520 YGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGH 564
Score = 51 (23.0 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S++ T + Y GH V P ++ G D AR+W + G
Sbjct: 546 TVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG 605
Query: 74 H 74
H
Sbjct: 606 H 606
Score = 49 (22.3 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 29/97 (29%), Positives = 38/97 (39%)
Query: 48 LITAG-RDSTARVWDVRTKA-NVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMF 105
+I G DST RVW V K + I E + KT S +I++
Sbjct: 464 MIVGGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTA---SELKILY 520
Query: 106 -----VLGTA-----GFLLSCLPSLLDFGTIRPWQLQ 132
V GT+ +LLSC GT+R W LQ
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSED----GTVRLWSLQ 553
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 187 (70.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 79/303 (26%), Positives = 126/303 (41%)
Query: 153 LVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLY 212
LV R H+ +++ P+ + L+ + T I K K Q+ P K +
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLI----KWKLTGGEDNQYGIPKKSF 62
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V+ V + + + S D+ +++WDL TG+ GH G V ++++
Sbjct: 63 K---GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ S D+TVK W+ G D S + D S S +I+ DKTVK +
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQS-STVISASWDKTVKSW 178
Query: 333 K-EDDSATEE--SHP----VITGSHD---CT-------IRLWDLAAGKSLCTLTNHKKSV 375
D S + H IT S D C I LWDL K+L TL K V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL-EAKAEV 237
Query: 376 RSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGT 435
++A P Y A+A+ IK +K E + L A+ + + E + ++ + +G
Sbjct: 238 HALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAV-GATAKDPEAISLAWSADGQ 296
Query: 436 MCF 438
F
Sbjct: 297 NLF 299
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 70 TLTGHTNTIASVVTQASEPQV 90
TL GH + S+ T + P +
Sbjct: 12 TLEGHNGWVTSLATTPAHPDL 32
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 187 (70.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 79/303 (26%), Positives = 126/303 (41%)
Query: 153 LVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLY 212
LV R H+ +++ P+ + L+ + T I K K Q+ P K +
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLI----KWKLTGGEDNQYGIPKKSF 62
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V+ V + + + S D+ +++WDL TG+ GH G V ++++
Sbjct: 63 K---GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ S D+TVK W+ G D S + D S S +I+ DKTVK +
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQS-STVISASWDKTVKSW 178
Query: 333 K-EDDSATEE--SHP----VITGSHD---CT-------IRLWDLAAGKSLCTLTNHKKSV 375
D S + H IT S D C I LWDL K+L TL K V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL-EAKAEV 237
Query: 376 RSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGT 435
++A P Y A+A+ IK +K E + L A+ + + E + ++ + +G
Sbjct: 238 HALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAV-GATAKDPEAISLAWSADGQ 296
Query: 436 MCF 438
F
Sbjct: 297 NLF 299
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 70 TLTGHTNTIASVVTQASEPQV 90
TL GH + S+ T + P +
Sbjct: 12 TLEGHNGWVTSLATTPAHPDL 32
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 203 (76.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT- 268
+L +V+ GH G V + GN TGS D+ ++VW++ TG+ GH ++R L
Sbjct: 440 QLMKVLEGHEGGVWALKYT-GNT-LVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDI 497
Query: 269 ---------------VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTF 313
V P +P L + D + W K PV S D F F
Sbjct: 498 IHPAVIGKNQDGEDIVFPEYPLLITGSRDHNIHVW-----KLPVVDDSQDYIE-TFEGEF 551
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA-GKSLCTLTNHK 372
DN + + ++V+ S + + +I+GS+D T+R+WDL G L H
Sbjct: 552 DNPYLIAVLSGHTQSVR------SISGYGNIIISGSYDSTVRVWDLLDDGHCTHVLQGHL 605
Query: 373 KSVRSVALH-PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
V S A+ + F+ + NI W G+ + L GH +++ + + ++ VLVS A
Sbjct: 606 DRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDD-VLVSAA 664
Query: 432 DNGTMCFWDWRTG 444
+ T+ WD +TG
Sbjct: 665 ADATLRIWDAKTG 677
Score = 114 (45.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V+ GHL V A++ ++ +GS D I VW+ TG+LK L GH V GL +
Sbjct: 600 VLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLV-GL-LDLVD 657
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
L S D T++ WD + + S G F++ G R+++ ++K +KL+
Sbjct: 658 DVLVSAAADATLRIWDAKTGELR----SKLKGHGAAITCFEHDGLRVVSG-SEKMLKLW 711
Score = 109 (43.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/224 (23%), Positives = 88/224 (39%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNK 294
TGS D I VW L ++ + G +PYL + T + Y
Sbjct: 522 TGSRDHNIHVWKLPVVD---DSQDYIETFEG---EFDNPYLIAVLSGHTQSVRSISGYGN 575
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
+ GS DS ++ + D + ++ D+ + S T +GS D I
Sbjct: 576 IIIS-GSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKT-----CFSGSMDSNI 629
Query: 355 RLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNA 414
+W+ G+ L H V + L + + A+A ++ W G+ L GH A
Sbjct: 630 NVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADA-TLRIWDAKTGELRSKLKGHGA 688
Query: 415 IINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
I C ++G+ +VSG++ + W+ G F R + V+G
Sbjct: 689 AIT--CFEHDGLRVVSGSEK-MLKLWNVEKG-TFARDLLSDVTG 728
Score = 77 (32.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH V +L T + L+T D T RVW+++T + GHT+TI
Sbjct: 447 GHEGGV--WALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTI 492
Score = 77 (32.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNTIAS 80
GH SV +IS + I +I+ DST RVWD+ + + L GH + + S
Sbjct: 562 GHTQSVRSISGYGNI--IISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYS 610
Score = 71 (30.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
VW++ TG+ GH ++R L +I G I + P +LIT RD V
Sbjct: 473 VWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIGKNQDGEDI-VFPEYPLLITGSRDHNIHV 531
Query: 60 W 60
W
Sbjct: 532 W 532
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
++ TG+L L GH G V L
Sbjct: 433 IYSTQTGQLMKVLEGHEGGVWAL 455
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKP 203
P T N + T + I++ + LP+P P
Sbjct: 178 PRTPNVMNSPTHTPISDIEEDPIQQLPLPSP 208
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 203 (76.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT- 268
+L +V+ GH G V + GN TGS D+ ++VW++ TG+ GH ++R L
Sbjct: 440 QLMKVLEGHEGGVWALKYT-GNT-LVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDI 497
Query: 269 ---------------VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTF 313
V P +P L + D + W K PV S D F F
Sbjct: 498 IHPAVIGKNQDGEDIVFPEYPLLITGSRDHNIHVW-----KLPVVDDSQDYIE-TFEGEF 551
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA-GKSLCTLTNHK 372
DN + + ++V+ S + + +I+GS+D T+R+WDL G L H
Sbjct: 552 DNPYLIAVLSGHTQSVR------SISGYGNIIISGSYDSTVRVWDLLDDGHCTHVLQGHL 605
Query: 373 KSVRSVALH-PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
V S A+ + F+ + NI W G+ + L GH +++ + + ++ VLVS A
Sbjct: 606 DRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLVGLLDLVDD-VLVSAA 664
Query: 432 DNGTMCFWDWRTG 444
+ T+ WD +TG
Sbjct: 665 ADATLRIWDAKTG 677
Score = 114 (45.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V+ GHL V A++ ++ +GS D I VW+ TG+LK L GH V GL +
Sbjct: 600 VLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLVGHASLV-GL-LDLVD 657
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
L S D T++ WD + + S G F++ G R+++ ++K +KL+
Sbjct: 658 DVLVSAAADATLRIWDAKTGELR----SKLKGHGAAITCFEHDGLRVVSG-SEKMLKLW 711
Score = 109 (43.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/224 (23%), Positives = 88/224 (39%)
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNK 294
TGS D I VW L ++ + G +PYL + T + Y
Sbjct: 522 TGSRDHNIHVWKLPVVD---DSQDYIETFEG---EFDNPYLIAVLSGHTQSVRSISGYGN 575
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
+ GS DS ++ + D + ++ D+ + S T +GS D I
Sbjct: 576 IIIS-GSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKT-----CFSGSMDSNI 629
Query: 355 RLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNA 414
+W+ G+ L H V + L + + A+A ++ W G+ L GH A
Sbjct: 630 NVWNFETGELKKVLVGHASLVGLLDLVDDVLVSAAADA-TLRIWDAKTGELRSKLKGHGA 688
Query: 415 IINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
I C ++G+ +VSG++ + W+ G F R + V+G
Sbjct: 689 AIT--CFEHDGLRVVSGSEK-MLKLWNVEKG-TFARDLLSDVTG 728
Score = 77 (32.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GH V +L T + L+T D T RVW+++T + GHT+TI
Sbjct: 447 GHEGGV--WALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTI 492
Score = 77 (32.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKAN-VYTLTGHTNTIAS 80
GH SV +IS + I +I+ DST RVWD+ + + L GH + + S
Sbjct: 562 GHTQSVRSISGYGNI--IISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYS 610
Score = 71 (30.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRH-YHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
VW++ TG+ GH ++R L +I G I + P +LIT RD V
Sbjct: 473 VWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIGKNQDGEDI-VFPEYPLLITGSRDHNIHV 531
Query: 60 W 60
W
Sbjct: 532 W 532
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
++ TG+L L GH G V L
Sbjct: 433 IYSTQTGQLMKVLEGHEGGVWAL 455
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKP 203
P T N + T + I++ + LP+P P
Sbjct: 178 PRTPNVMNSPTHTPISDIEEDPIQQLPLPSP 208
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 353 TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPG 411
TI+LWD + + T+ H +V SVA+ P SAS D IK W+ G ++ G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 412 HNAIINSICVNNEGVLVSGADNG-TMCFWDWRTGYNFQRLQ-----VRCVSGFPKPS 462
H + + N +G L++ N T+ W T L+ V C+S P+ S
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 118
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 15 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 74
Query: 273 HPYLFSCGDDRTVKCW 288
+ SC +D+TV+ W
Sbjct: 75 GTLIASCSNDQTVRVW 90
Score = 117 (46.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 21 RGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+G IR HGH +V+++++ P D +++A RD T ++W+V+T V T TGH +
Sbjct: 9 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 68
Query: 81 V 81
V
Sbjct: 69 V 69
Score = 110 (43.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH WVR V G ++ + + DK ++VWD + +L H V L PY+
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 277 FSCGDDRTVKCWD 289
+ D+TVK W+
Sbjct: 191 VTGSVDQTVKVWE 203
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 64/257 (24%), Positives = 108/257 (42%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
+G L ++R V P ++ ATG+ DK I+VWD+ T +++ GH + L +
Sbjct: 344 TGDL-YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRT 402
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
+ S DRTV+ WD+E A E G+ ++ + DK+V+++
Sbjct: 403 IASGSGDRTVRLWDIENGTALTV---FTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLT 459
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASP-DN 394
E G D + G+ L T +L T+ ++ A+P N
Sbjct: 460 QGCPVERLEGPDGHKDSVYSVAFSPNGRDLVT----------GSLDKTIKLWELATPRGN 509
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICV--NNEGVLVSGADNGTMCFWDWRTGYNFQRLQV 452
++ G+ ++ GH + S+ + +N+ V+ D G FWD RTG LQ
Sbjct: 510 MQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQ-FWDPRTGSTQLMLQG 568
Query: 453 R---CVSGFPKPSVFFF 466
+S P P+ FF
Sbjct: 569 HKNSVISVAPSPTGGFF 585
Score = 178 (67.7 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATG----KLKLSLTGHVGSVRGLTVSPRHPYLF 277
V VA+ P ++ A GS DK ++VWDL G +L+ GH SV + SP L
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLE-GPDGHKDSVYSVAFSPNGRDLV 490
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDS 337
+ D+T+K W+L + +Q + S+ G TF+ G R D + + +
Sbjct: 491 TGSLDKTIKLWELATPRGNMQ--NQGSKGGRCVKTFE--GHR------DFVLSV-----A 535
Query: 338 ATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
T ++ V++GS D ++ WD G + L HK SV SVA PT FA+ S D
Sbjct: 536 LTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGD 591
Score = 129 (50.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH +V VA+ P N+W +GS D+ ++ WD TG +L L GH SV + SP
Sbjct: 522 KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPT 581
Query: 273 HPYLFSCGDDRTVKCW 288
+ + D + W
Sbjct: 582 GGFFATGSGDMRARIW 597
Score = 63 (27.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P L T D RVWD+ T+ GH I S+
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSL 394
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
GH SV +++ P L+T D T ++W++ T
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELAT 505
Score = 60 (26.2 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LATG + V + T+ + GH + ++ + + D T R+WD+
Sbjct: 361 LATGAEDKQI--RVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE 418
Query: 64 --TKANVYTLTGHTNTIA 79
T V+T+ T+A
Sbjct: 419 NGTALTVFTIEDGVTTVA 436
Score = 58 (25.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG---HTNTIASV 81
V T+++ P + D + RVWD+ V L G H +++ SV
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSV 480
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH V VA+ P + + S DK IK+W++ TG + TGH VR + +
Sbjct: 18 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 77
Query: 273 HPYLFSCGDDRTVKCW 288
+ SC +D+TV+ W
Sbjct: 78 GTLIASCSNDQTVRVW 93
Score = 119 (46.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 43/214 (20%), Positives = 93/214 (43%)
Query: 238 SADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPV 297
SAD IK+WD + ++ GH +V + + P ++ S D+T+K W+++ V
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-V 59
Query: 298 QPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLW 357
+ + E + + + G+ + + D+TV+++ AT+E + H+ +
Sbjct: 60 KTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELR-EHEHVVECI 114
Query: 358 DLAAGKSLCTLTN-------HKKSVRSVALHPT-LYMFASASPDNIKQWKCPEGKFIQNL 409
A S +++ H VR V H ++ + A ++ W + ++ L
Sbjct: 115 SWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 174
Query: 410 PGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
H + S+ + +V+G+ + T+ W+ R
Sbjct: 175 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
Score = 117 (46.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 21 RGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIAS 80
+G IR HGH +V+++++ P D +++A RD T ++W+V+T V T TGH +
Sbjct: 12 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 71
Query: 81 V 81
V
Sbjct: 72 V 72
Score = 110 (43.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH WVR V G ++ + + DK ++VWD + +L H V L PY+
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 277 FSCGDDRTVKCWD 289
+ D+TVK W+
Sbjct: 194 VTGSVDQTVKVWE 206
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 159 (61.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH V C++ TG D +VWDL TG+ + L GH+G+V G+ SP ++
Sbjct: 393 GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 277 FSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNS-GSRLITTEADKTVKLYKE 334
+ D T K WDL + PV ++ + + + S + + GS L+T D T K++
Sbjct: 453 ATGSQDNTCKIWDLR-RRQPVY--TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWS- 508
Query: 335 DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
+ T + + G HD + D+A T+ ++ +
Sbjct: 509 --NKTWQPLKTLQG-HDNKVISVDIAPNSQYIATTSFDRTFK 547
Score = 122 (48.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 50/199 (25%), Positives = 78/199 (39%)
Query: 215 ISGHLGW-VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
I+GH+ V VA P + AT D ++WDL L GH V L+
Sbjct: 348 ITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDG 407
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLY 332
L + G D + WDL + + ++ G +F + F +G + T D T K++
Sbjct: 408 SVLVTGGLDAFGRVWDLRTGRCIM---FLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIW 464
Query: 333 ---KEDDSATEESHP---------------VITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ T +H ++T S+D T ++W + L TL H
Sbjct: 465 DLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNK 524
Query: 375 VRSVALHPTLYMFASASPD 393
V SV + P A+ S D
Sbjct: 525 VISVDIAPNSQYIATTSFD 543
Score = 121 (47.7 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR-H 273
+ GHLG V V P ATGS D K+WDL + ++ H + +
Sbjct: 433 LEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECG 492
Query: 274 PYLFSCGDDRTVKCWDLEYNKA--PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+L +C D T K W NK P++ ++ + S+ + + TT D+T KL
Sbjct: 493 SFLVTCSYDSTTKIWS---NKTWQPLKT-LQGHDNKVISVDIAPNSQYIATTSFDRTFKL 548
Query: 332 YKED 335
+ D
Sbjct: 549 WSPD 552
Score = 117 (46.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
L TG L G V +R I GHL +V + P + T +D+T ++WD+R
Sbjct: 410 LVTGGL--DAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR 467
Query: 64 TKANVYTLTGHTNTIASVVTQ 84
+ VYT+ HTN I+ V Q
Sbjct: 468 RRQPVYTIPAHTNLISDVKYQ 488
Score = 113 (44.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 44/158 (27%), Positives = 68/158 (43%)
Query: 306 SGIFSMT--FDNSGSRLITTEADKTVKLYKEDD-------SATEESHPVITGSHDCTIRL 356
SG F T +D+S RL E KT L++E S + ++TG D R+
Sbjct: 364 SGRFLATACYDSSW-RLWDLE-QKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRV 421
Query: 357 WDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAI 415
WDL G+ + L H +V V P + A+ S DN K W + + +P H +
Sbjct: 422 WDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNL 481
Query: 416 INSICVNNE--GVLVSGADNGTMCFWDWRTGYNFQRLQ 451
I+ + E LV+ + + T W +T + LQ
Sbjct: 482 ISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQ 519
Score = 111 (44.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T + H GH V+ +S H VL+T G D+ RVWD+RT + L GH + V
Sbjct: 386 TEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGV 443
Score = 82 (33.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 15 GHVGSVR--GLT---VIRHYHGHLSS-VNTISLHPTIDVLITAGRDSTARVWDVRTKANV 68
GH G+V+ G I GH+ V+ ++ HP+ L TA DS+ R+WD+ K V
Sbjct: 329 GHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEV 388
Query: 69 YTLTGHTNTI 78
GH +
Sbjct: 389 LHQEGHAKPV 398
Score = 69 (29.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 205 W-HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVW 246
W + W+ + + GH V V + P +++ AT S D+ K+W
Sbjct: 507 WSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 59 (25.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 31 GHLSSVNTISLHPTIDV-------LITAGRDSTARVWDVRTKANVYTLTGH 74
GH S V ++L P + + + G D ++W + ++ +TGH
Sbjct: 301 GHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGH 351
Score = 45 (20.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
G V++ + +L+T+ ++W V TL GH + + V
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGV 309
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 146 (56.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 59/198 (29%), Positives = 82/198 (41%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWD-LATGKLKLSLTGHVG 262
W A K R GH V VA N +GS DK IK+W+ LA K + GH
Sbjct: 91 WDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTD 150
Query: 263 SVRGLTVSPRH--PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS-MTFDNSGSR 319
V + SP H P + SCG DRTVK W+L K + +G + +T GS
Sbjct: 151 WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLK---NNHHGHNGYLNTVTVSPDGSL 207
Query: 320 LITTEADKTVKLYKEDDSA---TEESHPVITG------------SHDCTIRLWDLAAGKS 364
+ D L+ +D T E + +I ++ +I++WDLA K+
Sbjct: 208 CTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKT 267
Query: 365 LCTLTNHKKSVRSVALHP 382
+ L S S A P
Sbjct: 268 VEELRPEVVSPTSKADQP 285
Score = 141 (54.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 40/119 (33%), Positives = 54/119 (45%)
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWH--APWKLYRVISGHLGWVRCVAVEPG--NEWFA 235
V +A N QI+ ++ K + + W+ A K GH WV CV P N
Sbjct: 112 VAFSADNRQIVSGSRDKTIKL----WNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIV 167
Query: 236 TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
+ D+ +KVW+LA KLK + GH G + +TVSP S G D WDL K
Sbjct: 168 SCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGK 226
Score = 126 (49.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH ++ V + + +GS D+ +++WDLA GK GH V + S + +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 277 FSCGDDRTVKCWD-LEYNKAPVQP-GSMDSESGI-FSMTFDNSGSRLITTEADKTVKLYK 333
S D+T+K W+ L K +Q G D S + FS ++S +++ D+TVK++
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSP--NHSNPIIVSCGWDRTVKVWN 179
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCT 367
+ + +H H+ + ++ SLCT
Sbjct: 180 LANCKLKNNHH----GHNGYLNTVTVSPDGSLCT 209
Score = 120 (47.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 34/116 (29%), Positives = 50/116 (43%)
Query: 341 ESHPVITGSHDCTIRLWD-LAAGKSLCTLTNHKKSVRSVALHPTLY--MFASASPDN-IK 396
++ +++GS D TI+LW+ LA K H V V P + S D +K
Sbjct: 117 DNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVK 176
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRLQ 451
W K N GHN +N++ V+ +G L SG + WD G N L+
Sbjct: 177 VWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE 232
Score = 117 (46.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 39/142 (27%), Positives = 57/142 (40%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W+ A KL GH G++ V V P +G D +WDL GK +L H
Sbjct: 178 WNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDI 236
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKA-----P--VQPGSMDSESGIFSMTFDNS 316
+ L SP Y ++K WDL K P V P S + S+ +
Sbjct: 237 INALCFSPNR-YWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTD 295
Query: 317 GSRLITTEADKTVKLYKEDDSA 338
G L +D T+++++ SA
Sbjct: 296 GQTLFAGYSDNTIRVWQVSVSA 317
Score = 117 (46.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/107 (32%), Positives = 51/107 (47%)
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQ 397
+ + + ++GS D T+RLWDLAAGK+ H K V SVA S S D IK
Sbjct: 73 SSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKL 132
Query: 398 WKC-PEGKFIQNLPGHNAIINSI--CVNNEG-VLVSGADNGTMCFWD 440
W E KF GH ++ + N+ ++VS + T+ W+
Sbjct: 133 WNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWN 179
Score = 116 (45.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLAT------GKLKLSLTGHVG 262
+L + GH GWV +A P + + + S DK + VW L G + L GH
Sbjct: 6 QLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSH 65
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+ + +S Y S D+T++ WDL K + + + S+ F ++++
Sbjct: 66 FISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKD--VLSVAFSADNRQIVS 123
Query: 323 TEADKTVKLY 332
DKT+KL+
Sbjct: 124 GSRDKTIKLW 133
Score = 94 (38.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 342 SHPVITG-SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWK 399
S+P+I D T+++W+LA K H + +V + P + S D+ W
Sbjct: 162 SNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD 221
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVS 456
+GK + L HN IIN++C + + A ++ WD + L+ VS
Sbjct: 222 LNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVS 277
Score = 74 (31.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
+ +GH ++ + L + ++ D T R+WD+ GHT + SV A
Sbjct: 58 KRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSAD 117
Query: 87 EPQV 90
Q+
Sbjct: 118 NRQI 121
Score = 66 (28.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT--GHTNTIASV 81
R + GH V +++ +++ RD T ++W+ + +T+ GHT+ ++ V
Sbjct: 100 RRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECK-FTIQEDGHTDWVSCV 155
Score = 65 (27.9 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 20 VRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV-RTKANVY-----TLTG 73
+RG T+I H +G ++ + T P D +I+A RD T VW + R + Y L G
Sbjct: 7 LRG-TLIGH-NGWVTQIATNPKDP--DTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYG 62
Query: 74 HTNTIASVV 82
H++ I+ VV
Sbjct: 63 HSHFISDVV 71
Score = 62 (26.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 250 TGKLKLSLTGHVGSVRGLTVSPRHP-YLFSCGDDRTVKCWDL----EYNKAPVQPGSMDS 304
T +L+ +L GH G V + +P+ P + S D+T+ W L + N Q
Sbjct: 4 TLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGH 63
Query: 305 ESGIFSMTFDNSGSRLITTEADKTVKLY 332
I + + G+ ++ D+T++L+
Sbjct: 64 SHFISDVVLSSDGNYALSGSWDQTLRLW 91
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 70 TLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFV 106
TL GH + + T +P T++ S ++ + V
Sbjct: 10 TLIGHNGWVTQIATNPKDPD----TIISASRDKTLIV 42
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 144 (55.7 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 42/131 (32%), Positives = 59/131 (45%)
Query: 169 QELVPSTENQL-VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVIS--GHLGWVRCV 225
+ V T++ L V +A N QI+ ++ K + + W+ I H WV CV
Sbjct: 99 RRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL----WNTLGVCKYTIQDDSHTEWVSCV 154
Query: 226 AVEPG--NEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDR 283
P N + DK++KVW+LA KLK + GH G + +TVSP S G D
Sbjct: 155 RFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 284 TVKCWDLEYNK 294
WDL K
Sbjct: 215 QAMLWDLNEGK 225
Score = 124 (48.7 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 34/137 (24%), Positives = 61/137 (44%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH +V V + ++ +GS D +++WDL TG GH V + S
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSAD 116
Query: 273 HPYLFSCGDDRTVKCWD-LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
+ + S D+T+K W+ L K +Q S + ++S +++ DK VK+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKV 176
Query: 332 YKEDDSATEESHPVITG 348
+ + + +H TG
Sbjct: 177 WNLANCKLKTNHIGHTG 193
Score = 113 (44.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 39/156 (25%), Positives = 62/156 (39%)
Query: 300 GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWD- 358
GS D ++ +T + R + D + D+ +++GS D TI+LW+
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADN------RQIVSGSRDKTIKLWNT 134
Query: 359 LAAGKSLCTLTNHKKSVRSVALHPTLY--MFASASPDN-IKQWKCPEGKFIQNLPGHNAI 415
L K +H + V V P + S D +K W K N GH
Sbjct: 135 LGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGY 194
Query: 416 INSICVNNEGVL-VSGADNGTMCFWDWRTGYNFQRL 450
+N++ V+ +G L SG +G WD G + L
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Score = 112 (44.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 37/141 (26%), Positives = 60/141 (42%)
Query: 215 ISGHLGWVRCVAVEPG-NEWFATGSADKIIKVWDLAT-----GKLKLSLTGHVGSVRGLT 268
+ GH GWV +A P + + S DK I +W L G + +L GH V +
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
+S + S D T++ WDL + + + S+ F ++++ DKT
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRR--FVGHTKDVLSVAFSADNRQIVSGSRDKT 128
Query: 329 VKLYK---------EDDSATE 340
+KL+ +DDS TE
Sbjct: 129 IKLWNTLGVCKYTIQDDSHTE 149
Score = 106 (42.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/132 (26%), Positives = 55/132 (41%)
Query: 161 THDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWH-APWKLYRVISGHL 219
+H ++SC P++ N ++ + + + K W+ A KL GH
Sbjct: 146 SHTEWVSCVRFSPNSSNPIIVSCGWDKMV------KV-------WNLANCKLKTNHIGHT 192
Query: 220 GWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
G++ V V P A+G D +WDL GK +L G ++ L SP Y
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DTINALCFSPNR-YWLCA 250
Query: 280 GDDRTVKCWDLE 291
++K WDLE
Sbjct: 251 ATGPSIKIWDLE 262
Score = 96 (38.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/140 (27%), Positives = 60/140 (42%)
Query: 316 SGSRLITTEADKTVKLYK---EDDSATE----------ESHPVITG-SHDCTIRLWDLAA 361
SGSR T + T+ + K +DDS TE S+P+I D +++W+LA
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQ-WKCPEGKFIQNLPGHNAIINSIC 420
K H + +V + P + AS D W EGK + L G + I N++C
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTI-NALC 240
Query: 421 VNNEGVLVSGADNGTMCFWD 440
+ + A ++ WD
Sbjct: 241 FSPNRYWLCAATGPSIKIWD 260
Score = 91 (37.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 22/54 (40%), Positives = 26/54 (48%)
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQW 398
++GS D T+RLWDL G + H K V SVA S S D IK W
Sbjct: 79 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLW 132
Score = 82 (33.9 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFI 406
+G D LWDL GK L TL ++ ++ P Y +A+ +IK W EGK I
Sbjct: 209 SGGKDGQAMLWDLNEGKHLYTLDGGD-TINALCFSPNRYWLCAATGPSIKIWDL-EGKII 266
Score = 78 (32.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 27 RHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
R GH V+ + + ++ D T R+WD+ T GHT + SV A
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSAD 116
Query: 87 EPQV 90
Q+
Sbjct: 117 NRQI 120
Score = 66 (28.3 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTI-DVLITAGRDSTARVWDV-RTKANV----YTLTGHTN 76
+TV GH V I+ P D++++A RD T +W + R + N L GH++
Sbjct: 5 MTVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 64
Query: 77 TIASVV 82
++ VV
Sbjct: 65 FVSDVV 70
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 185 (70.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+++GH G V C+ + TGS+D ++VWD+ G++ +L H +V L +
Sbjct: 337 RILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-- 392
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 393 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 453 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P G ++ L H+ + + + E +VS
Sbjct: 513 RFD-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVS 570
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 571 SSHDDTILIWDF 582
Score = 175 (66.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 60/239 (25%), Positives = 109/239 (45%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + ++ +G D IK+WD T + K LTGH GSV L R + +
Sbjct: 306 VYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSS 361
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE- 340
D TV+ WD+ N + + + + F+N ++T D+++ ++ + S T+
Sbjct: 362 DSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMASPTDI 416
Query: 341 ------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 417 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD 476
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 477 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 532
Score = 119 (46.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + N+G L T L+ ++
Sbjct: 341 GHTGSVLC--LQYDERVIITGSSDSTVRVWDV---NAGEMLNTLIHHCEAVLHLRFNNGM 395
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 396 -----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 449
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 452 -VRCV 455
VRC+
Sbjct: 508 LVRCI 512
Score = 55 (24.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD T + K LTGH GSV
Sbjct: 327 IWDKNTLECKRILTGHTGSV 346
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
L R +GH G + + P AT S D + +W+L + H V G+ S
Sbjct: 10 LERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWS 69
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSES-GIFSMTFDNSGSRLITTEADKTV 329
P+ + S G DRTVK W+ + G + S + S+ FD++G ++T DK+
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVS---GEFVAHSKAVRSVDFDSTGHLMLTASDDKSA 126
Query: 330 KLYKED-----DSATEESH--------P----VITGSHDCTIRLWDLAAGKSLCTLTNHK 372
K+++ S ++++ P V T S D ++R++D+ +G+ + T T +
Sbjct: 127 KIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEER 186
Query: 373 KSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG 425
+ R +A HP M A A N IK + + +Q H+A +N + + G
Sbjct: 187 AAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSG 240
Score = 138 (53.6 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 63/229 (27%), Positives = 99/229 (43%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H VR V + T S DK K+W +A + S VR SP +
Sbjct: 101 HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVA 160
Query: 278 SCGDDRTVKCWDL----------EYNKAPVQ----P-GSMDSES-GIFSMT-FDNSGSRL 320
+ DD++V+ +D+ E AP Q P G+M + + G + FD SGS+L
Sbjct: 161 TASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQL 220
Query: 321 ITTEADKTVKLYKEDDSATEES-HPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
+ + + +D A S H +++GS D TIR+ DL G+ + TLT H +V +VA
Sbjct: 221 LQLYVVHSAPV---NDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVA 277
Query: 380 LHPTLYMFASASPDN-IKQWKCPEGKF-IQNLPGHNAIINSICVNNEGV 426
FA+ D + W+ + +A+ +S C + GV
Sbjct: 278 FSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSC-ESSGV 325
Score = 109 (43.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H V VA P + +GS D+ I++ DL G+ +LTGH +V + S
Sbjct: 227 HSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFA 286
Query: 278 SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+ G DR + W + N +++S + S + ++SG +E T K
Sbjct: 287 TGGSDRQLLVW--QSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSK 337
Score = 98 (39.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
V + HD T+++W+ H K+VRSV T ++ +AS D + K W+
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGA-DNGTMCFWDWRTG 444
+F+ + N + S + G LV+ A D+ ++ +D +G
Sbjct: 135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSG 176
Score = 70 (29.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ H + VN ++ P +++ +AG D T ++W+ + + H+ + SV
Sbjct: 56 FASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSV 108
Score = 69 (29.3 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNT 77
G R + RH+ GH + + P + T+ DST +W++ A H+
Sbjct: 3 GLFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAP 62
Query: 78 IASV 81
+ V
Sbjct: 63 VNGV 66
Score = 62 (26.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 20 VRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIA 79
+RG++ + H +V ++ T +++TA D +A++W V + V + N +
Sbjct: 91 LRGVS--GEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVR 148
Query: 80 S 80
S
Sbjct: 149 S 149
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 156 (60.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 69/260 (26%), Positives = 107/260 (41%)
Query: 205 WHAPWKLYR-VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W K R ++GH ++C+ V N ATGS D I++WDL GK K LT +
Sbjct: 258 WDTKTKKCRFTLAGHYYPIQCLDVN--NNIMATGSLDNSIRIWDLEKGKSKGILTTRAHN 315
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLE--YNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
+ + S D TVK W++ N + P + + E DN +
Sbjct: 316 FDVFCLQQIGDQIISGSSDSTVKVWNIAEIINDSIEIPDTEEEEEEALQ---DNVMNDPF 372
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
T L D + + H I +D T + S T H+ V + ++
Sbjct: 373 AVNNSFT-SL--PDINEPDHVHTNIVSVNDKTSTRYRNHNLSSTHTF-KHQSCVTCLQVY 428
Query: 382 PTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
+ M + S ++ W + IQ L GHN I ++ N VLV+G+D+ T+ WD
Sbjct: 429 GNILM-SGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGN-VLVTGSDDTTVRVWDL 486
Query: 442 RT-GYNFQRLQ-----VRCV 455
R+ N L+ VRC+
Sbjct: 487 RSKNSNISTLRGHNGSVRCL 506
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 209 WKLYRVISGHL-GWVRCV-AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
WK R HL G V A+ +E TGS DK KVWD T K + +L GH ++
Sbjct: 219 WKGDRFKEAHLIGHTGTVWALHLDDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQC 278
Query: 267 LTVSPRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSM-TFDNSGSRLITTE 324
L V+ + + G D +++ WDLE K+ G + + + F + G ++I+
Sbjct: 279 LDVNNN---IMATGSLDNSIRIWDLEKGKSK---GILTTRAHNFDVFCLQQIGDQIISGS 332
Query: 325 ADKTVKLY 332
+D TVK++
Sbjct: 333 SDSTVKVW 340
Score = 114 (45.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS-LTGHVGSVRGLTVSP 271
+++SGH +R + GN TGS D ++VWDL + +S L GH GSVR L
Sbjct: 453 QILSGHNEGIRALQFN-GNV-LVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRCLQWDG 510
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLITTEADKTVK 330
L + +D++V+ W+L Y+ Q + S S I + F NS L+ +D V+
Sbjct: 511 TT--LITGSNDQSVRWWNLNYDSD--QSKELFSFNSSISCLQFTNS--ILMCGLSDSKVQ 564
Query: 331 LYK 333
+ K
Sbjct: 565 INK 567
Score = 95 (38.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY--- 332
L S G DR V+ WDL ++ P+Q S +E GI ++ F+ G+ L+T D TV+++
Sbjct: 432 LMSGGSDRVVRVWDLNTSQ-PIQILSGHNE-GIRALQFN--GNVLVTGSDDTTVRVWDLR 487
Query: 333 -KEDDSATEESH------------PVITGSHDCTIRLWDL 359
K + +T H +ITGS+D ++R W+L
Sbjct: 488 SKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNL 527
Score = 84 (34.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 28 HYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
H GH +V +LH + + T D TA+VWD +TK +TL GH
Sbjct: 228 HLIGHTGTV--WALHLDDERVYTGSFDKTAKVWDTKTKKCRFTLAGH 272
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 16 HVGSVRGLTVIRHYHGHLSSVNTISLHPTI-------DVLITAGRDSTARVWDVRTKANV 68
++ SV T R+ + +LSS +T + ++L++ G D RVWD+ T +
Sbjct: 393 NIVSVNDKTSTRYRNHNLSSTHTFKHQSCVTCLQVYGNILMSGGSDRVVRVWDLNTSQPI 452
Query: 69 YTLTGHTNTIASV 81
L+GH I ++
Sbjct: 453 QILSGHNEGIRAL 465
Score = 50 (22.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV 25
VWD T K + +L GH ++ L V
Sbjct: 257 VWDTKTKKCRFTLAGHYYPIQCLDV 281
Score = 48 (22.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LATGKLKLSLTG---HVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+ATG L S+ G +G+ R ++ + + I D +I+ DST +VW
Sbjct: 286 MATGSLDNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIG-----DQIISGSSDSTVKVW 340
Query: 61 DV 62
++
Sbjct: 341 NI 342
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 137 (53.3 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W WKL + GH +V V P + FA+ D+ +K+W L + + +L H
Sbjct: 126 WDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAK 185
Query: 264 -VRGLTVSPR--HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSE-SGIFSMTFDNSGSR 319
V + P+ PYL + DD+T+K WD + K+ V +++ S + F
Sbjct: 186 GVNYVDYYPQADKPYLITSSDDKTIKVWDYQ-TKSCV--ATLEGHLSNVSFAIFHPELPI 242
Query: 320 LITTEADKTVKLYKEDDSATEES 342
+++ D T++ + + E+S
Sbjct: 243 IVSGSEDGTIRFWNSNTFKLEKS 265
Score = 127 (49.8 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG-KLKLSLTGHVGSVRGLTVSPRHPYL 276
H ++R +AV P + T S D IK+W+ KL+ + GH V + +P+ P
Sbjct: 96 HPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNT 155
Query: 277 FSCGD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSR--LITTEADKTVKLYK 333
F+ DRTVK W L ++ + +++ G+ + + + LIT+ DKT+K++
Sbjct: 156 FASACLDRTVKIWSLGSSQPNFTLIAHEAK-GVNYVDYYPQADKPYLITSSDDKTIKVWD 214
Query: 334 EDDS---ATEESH 343
AT E H
Sbjct: 215 YQTKSCVATLEGH 227
Score = 121 (47.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 351 DCTIRLWDLAAGKSLCTLTNHK-KSVRSVALHPTL---YMFASASPDNIKQWKCPEGKFI 406
D T+++W L + + TL H+ K V V +P Y+ S+ IK W +
Sbjct: 162 DRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTKSCV 221
Query: 407 QNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRT-----GYNFQRLQVRCVSGFPK 460
L GH + ++ + E ++VSG+++GT+ FW+ T N+ + C+ PK
Sbjct: 222 ATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILPK 281
Query: 461 PSV 463
+V
Sbjct: 282 SNV 284
Score = 120 (47.3 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 233 WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
W GS D I+V++ TG+ H +R + V P PY+ + DD T+K W+ ++
Sbjct: 69 WIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDH 128
Query: 293 NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA-DKTVKLY 332
N Q + + S+ F+ + D+TVK++
Sbjct: 129 NWKLEQTFE-GHQHYVMSVNFNPKDPNTFASACLDRTVKIW 168
Score = 101 (40.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 302 MDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA 361
+D I+S+ LI EA K V Y + ++ + +IT S D TI++WD
Sbjct: 161 LDRTVKIWSLGSSQPNFTLIAHEA-KGVN-YVDYYPQADKPY-LITSSDDKTIKVWDYQT 217
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC 420
+ TL H +V HP L + S S D I+ W K +++ + ++ + C
Sbjct: 218 KSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWNSNTFKLEKSI--NYSLERAWC 275
Query: 421 VN---NEGVLVSGADNG 434
+ V+ +G D+G
Sbjct: 276 IGILPKSNVIAAGFDSG 292
Score = 72 (30.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW--DVRTKANVYTLTGHTNTIASVVT 83
+ + H + +I++HP+ ++T+ D T ++W D K T GH + + SV
Sbjct: 90 VTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLE-QTFEGHQHYVMSVNF 148
Query: 84 QASEP 88
+P
Sbjct: 149 NPKDP 153
Score = 64 (27.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/114 (22%), Positives = 44/114 (38%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V+ + P W T + I++W AT L S+ VR R ++ D
Sbjct: 16 VKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFIARKNWIVVGSD 75
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
D ++ ++ YN I S+ S ++T+ D T+KL+ D
Sbjct: 76 DFQIRVYN--YNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWD 127
Score = 50 (22.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL 71
L V++ + V I HPT ++T + +W T + V ++
Sbjct: 3 LDVVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSI 51
Score = 49 (22.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKT 94
++ D RV++ T V H + I S+ S+P + T +
Sbjct: 70 IVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSS 116
Score = 41 (19.5 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 425 GVLVSGADNGTMCFWDWRTGYNFQRLQV 452
G L+ G + F+DW G +R+ +
Sbjct: 439 GSLLGVKSEGCISFYDWEHGKLVRRVDL 466
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 172 (65.6 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 65/242 (26%), Positives = 111/242 (45%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL-ATGKLK-LSLTG-HVGSVRGLTVS 270
V+ GH V+CVA P AT S DK + +W++ + + LS+ H V+ +
Sbjct: 100 VLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWH 159
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P L S D + + E + + ES ++S+TFD G RL + D+TVK
Sbjct: 160 PTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVK 219
Query: 331 LYKED---DSATEESHPVI---TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTL 384
++KE D +++ES I +G H TI +D+A C LT ++ + +
Sbjct: 220 IWKESTTGDGSSDESWKCICTLSGFHGRTI--YDIA----WCRLTG---ALATACGDDGV 270
Query: 385 YMFASASPDNIKQWKCPEGKFIQNLP-GHNAIINSICVNNE--GVLVSGADNGTMCFWDW 441
+F+ + +Q P ++P HN +N + N + G+L + +DNG W +
Sbjct: 271 RVFSEDPTADPEQ---PIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWKY 327
Query: 442 RT 443
+
Sbjct: 328 NS 329
Score = 56 (24.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT---GHTNTIASVVTQASE 87
GH +V ++ P L +A D+T +W +T + LT GH N + V S
Sbjct: 59 GHQRTVRKVAWSPCGKYLASASFDATTCIWK-KTDEDFECLTVLEGHENEVKCVAWAPSG 117
Query: 88 PQVGT 92
+ T
Sbjct: 118 SLLAT 122
Score = 41 (19.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 39 ISLHPTIDVLITAGRDSTARVWDVRT---KANVYTLTGHTNTIASV 81
++ +P L T G D R+W + GH T+ V
Sbjct: 22 VAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKV 67
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 173 (66.0 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 63/239 (26%), Positives = 107/239 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD T + LTGH GSV L R + +
Sbjct: 228 VYCLQYD--DEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDER--VIVTGSS 283
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEE 341
D TV+ WD+ N V + + + F N ++T D+++ ++ + S T+
Sbjct: 284 DSTVRVWDV--NSGEVLNTLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVW-DMASPTDI 338
Query: 342 S-------HP------------VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
S H +++ S D TI++W + + + TL HK+ + +
Sbjct: 339 SLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 398
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 399 RLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 454
Score = 172 (65.6 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
++++GH G V C+ + TGS+D ++VWD+ +G++ +L H +V L
Sbjct: 259 KILTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC-- 314
Query: 273 HPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI---- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 315 NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 322 --TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR +
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
Query: 379 ALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLVS 429
+ + A IK W + P ++ L H+ + + + E ++S
Sbjct: 435 RFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIIS 492
Query: 430 GADNGTMCFWDW 441
+ + T+ WD+
Sbjct: 493 SSHDDTILIWDF 504
Score = 120 (47.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
G +V C L+Y++ + GS DS ++ + NSG L T L+ +
Sbjct: 263 GHTGSVLC--LQYDERVIVTGSSDSTVRVWDV---NSGEVLNTLIHHNEAVLHLRFCNGL 317
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNIK 396
++T S D +I +WD+A+ + L H+ +V V Y+ +++ IK
Sbjct: 318 -----MVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIK 371
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ---- 451
W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 372 VWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 452 -VRCV 455
VRC+
Sbjct: 430 LVRCI 434
Score = 65 (27.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD +T + LTGHT ++
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSV 268
Score = 49 (22.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD T + LTGH GSV
Sbjct: 249 IWDKQTLECLKILTGHTGSV 268
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 63/247 (25%), Positives = 111/247 (44%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H G VR V F +G D IKVW+ + +L GH+ +R + +P++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 278 SCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDD 336
S DD+T++ W+ + V G + +F +++ D+TV+++ D
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW--DI 164
Query: 337 SATEESHPVITGSHDCTIRLW----DLAAGKSLCT---LTNHKKSVRSVALHPTLYMFAS 389
A + ++ + D +RL DL G L H + V A HPTL + S
Sbjct: 165 GALRKK--TVSPADDI-MRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVS 221
Query: 390 ASPDN-IKQWKCPEGKF--IQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDW--RT 443
+ D +K W+ E K + L GH ++S+ + + ++VS +++ ++ WD RT
Sbjct: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRT 281
Query: 444 GYN-FQR 449
G F+R
Sbjct: 282 GLQTFRR 288
Score = 170 (64.9 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 61/234 (26%), Positives = 99/234 (42%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GHL ++R V W + S D+ I++W+ + LTGH V + P+ +
Sbjct: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLV 150
Query: 277 FSCGDDRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
S D+TV+ WD+ K V P D + M D G D VK E
Sbjct: 151 VSASLDQTVRVWDIGALRKKTVSPA--DDIMRLTQMNSDLFGG------VDAIVKYVLEG 202
Query: 336 -DSATEES--HP----VITGSHDCTIRLWDLAAGKS--LCTLTNHKKSVRSVALHPTLYM 386
D + HP +++G+ D ++LW + K+ + TL H +V SV H +
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 387 FASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCF 438
S S D +I+ W + +Q + + V+ E +L +G D+G + F
Sbjct: 263 IVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIVF 316
Score = 98 (39.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 41/184 (22%), Positives = 76/184 (41%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V++GH +V C + P + + S D+ ++VWD+ G L+ + LT +
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIMRLT--QMN 185
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK-----T 328
LF G D VK + LE + V + + D+ +L K T
Sbjct: 186 SDLFG-GVDAIVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
Query: 329 VKLYKEDDSAT---EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
++ + + S+ + +++ S D +IR+WD L T +A+HP +
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN 303
Query: 386 MFAS 389
+ A+
Sbjct: 304 LLAA 307
Score = 90 (36.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
GHL + T+ H +++A D T R+W+ +++ V LTGH + +
Sbjct: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYV 138
Score = 76 (31.8 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
T+I + H V + H + + ++ G D +VW+ + ++TL GH + I +V
Sbjct: 42 TLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTV 99
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 57/191 (29%), Positives = 81/191 (42%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
+ GH V C+ E + ATGS D IK+WD TG+ +L GH +R L
Sbjct: 343 KTFKGHTNGVMCLQFE--DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDT 400
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
L S DRT+K W+ + + + G+ + FD S L + DKTVK++
Sbjct: 401 K--LISGSMDRTIKVWNWRTGEC-ISTYT-GHRGGVIGLHFD--ASILASGSVDKTVKIW 454
Query: 333 KEDDSAT----------------EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
+D +T S V + S DCT+RLWDL + T H V+
Sbjct: 455 NFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQ 514
Query: 377 SVALHPTLYMF 387
V P + F
Sbjct: 515 QVVPLPREFEF 525
Score = 160 (61.4 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 54/217 (24%), Positives = 88/217 (40%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W+ K + GH WV V V+ + + S D +++WDL T + GHVG V
Sbjct: 454 WNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCW--DLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+ + PR + F ++ +C DL P S+ + G+ + S T
Sbjct: 514 QQVVPLPRE-FEF---EEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGT 569
Query: 323 TEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
+ D+ ++T + D TIRLW+ G+ L T H + V ++
Sbjct: 570 SF----------DNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGAD- 618
Query: 383 TLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSI 419
TL + + A IK W GK + GH+ + I
Sbjct: 619 TLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCI 655
Score = 139 (54.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 62/245 (25%), Positives = 99/245 (40%)
Query: 205 WHAPWKLYRVIS---GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
W+ W+ IS GH G V + + A+GS DK +K+W+ K SL GH
Sbjct: 414 WN--WRTGECISTYTGHRGGV--IGLHFDASILASGSVDKTVKIWNFED-KSTFSLRGHT 468
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQP--GSMDSESGIFSMTFDNSGSR 319
V + V +FS DD TV+ WDL+ K ++ G + + + +
Sbjct: 469 DWVNAVRVDTSSRTVFSASDDCTVRLWDLD-TKTCIRTFHGHVGQVQQVVPLPREFEFE- 526
Query: 320 LITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
E D E+D + S S ++ L AA + R+
Sbjct: 527 ----EHDAEC----ENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAA- 577
Query: 380 LHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFW 439
P YM SA I+ W+ G+ ++ GH + ++ + + VSGA++ + W
Sbjct: 578 --PPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLRI-VSGAEDRMIKIW 634
Query: 440 DWRTG 444
D RTG
Sbjct: 635 DPRTG 639
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 341 ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWK 399
E + + TGS+D TI++WD G+ L TL H+ +R + T + S S D IK W
Sbjct: 358 EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLI--SGSMDRTIKVWN 415
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNF 447
G+ I GH + + + +L SG+ + T+ W++ F
Sbjct: 416 WRTGECISTYTGHRGGVIGLHFD-ASILASGSVDKTVKIWNFEDKSTF 462
Score = 88 (36.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
GH VN + + + + +A D T R+WD+ TK + T GH + VV
Sbjct: 466 GHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVV 517
Score = 80 (33.2 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 22 GLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
G I+ + GH + V + I L T D+T ++WD T + TL GH + I
Sbjct: 338 GRCSIKTFKGHTNGVMCLQFEDNI--LATGSYDTTIKIWDTETGEELRTLRGHESGI 392
Score = 78 (32.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
+R GH S + + T LI+ D T +VW+ RT + T TGH + + A
Sbjct: 382 LRTLRGHESGIRCLQFDDT--KLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDA 439
Query: 86 SEPQVGT--KTVLLESCE 101
S G+ KTV + + E
Sbjct: 440 SILASGSVDKTVKIWNFE 457
Score = 71 (30.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
+++G+ D I++WD GK T T H V + L + FA+ S D
Sbjct: 622 IVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDS--RFATGSED 668
Score = 52 (23.4 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
VW+ TG+ + TGH G V GL
Sbjct: 413 VWNWRTGECISTYTGHRGGVIGL 435
Score = 48 (22.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGL 23
+WD TG+ +L GH +R L
Sbjct: 373 IWDTETGEELRTLRGHESGIRCL 395
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 160 (61.4 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 57/242 (23%), Positives = 106/242 (43%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-----LKLSLTGHVGSVRGLT 268
V+ GH V+ V+ AT DK + +W++ + LTGH V+ +
Sbjct: 87 VLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 269 VSPRHPYLFSCGDDRTVKCW-----DLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLIT 322
P LFSC D T+K W D +YN + S ++S++F+ +G +++T
Sbjct: 147 WHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVT 206
Query: 323 TEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSV-RSVALH 381
D VK++K D S + + +H CT+ + +++ ++ + V S A
Sbjct: 207 CSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFH---DRTIYSVHWSRDGVIASGAGD 263
Query: 382 PTLYMFASASPDNIKQWKCPEGKF-IQNLPGHNAIINSI--CVNNEG-VLVSGADNGTMC 437
T+ +F + D++ P K ++ H +NS+ + E +L S +D+ +
Sbjct: 264 DTIQLFVDSDSDSVDG---PSYKLLVKKEKAHEMDVNSVQWAPDKESRLLASASDDKMVK 320
Query: 438 FW 439
W
Sbjct: 321 IW 322
Score = 68 (29.0 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 22 GLTVIRHYHGHLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLT-GH 74
GL ++ GH V ++ +P D V+ + D T R+W+ + +T GH
Sbjct: 9 GLEEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGH 63
Score = 40 (19.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 54 DSTARVWD--VRTKANVYTLTGHTNTIASVVTQASEPQVGT 92
D VW+ +V L GH + + SV AS + T
Sbjct: 69 DGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLAT 109
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 192 (72.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
WKL +++ H V + + + ATG D + +W + +SLTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
++ + + +++ WDLE A + M ++ I S+ F G + + D
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 328 TVKL-----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+KL Y+ A P + + + D T++LWDL AGK +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
H V V HP Y+ AS S D I+ W + + + + G + S+ N +G +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 430 GADNGTMCFWDW 441
++ + W
Sbjct: 248 SGCQDSLRVYGW 259
Score = 150 (57.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ GH G V V P A+GS+D+ I+ WDL ++ + G G VR +
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF 239
Query: 270 SPRHPYLFS-CGDDRTVKCWDLE 291
+P L+S C D V W+ E
Sbjct: 240 NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + ++R GH +++ ++ HP + + + +D+ ++WD+R K V+ GH+
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 77 TI 78
+
Sbjct: 149 AV 150
Score = 82 (33.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
GH S V ++ L+ T + LI AG S + RVWD+ + TL GH I S+
Sbjct: 61 GHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL 111
Score = 73 (30.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 192 (72.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
WKL +++ H V + + + ATG D + +W + +SLTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
++ + + +++ WDLE A + M ++ I S+ F G + + D
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 328 TVKL-----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+KL Y+ A P + + + D T++LWDL AGK +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
H V V HP Y+ AS S D I+ W + + + + G + S+ N +G +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 430 GADNGTMCFWDW 441
++ + W
Sbjct: 248 SGCQDSLRVYGW 259
Score = 150 (57.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ GH G V V P A+GS+D+ I+ WDL ++ + G G VR +
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF 239
Query: 270 SPRHPYLFS-CGDDRTVKCWDLE 291
+P L+S C D V W+ E
Sbjct: 240 NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + ++R GH +++ ++ HP + + + +D+ ++WD+R K V+ GH+
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 77 TI 78
+
Sbjct: 149 AV 150
Score = 82 (33.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
GH S V ++ L+ T + LI AG S + RVWD+ + TL GH I S+
Sbjct: 61 GHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL 111
Score = 73 (30.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 192 (72.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
WKL +++ H V + + + ATG D + +W + +SLTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
++ + + +++ WDLE A + M ++ I S+ F G + + D
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 328 TVKL-----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+KL Y+ A P + + + D T++LWDL AGK +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
H V V HP Y+ AS S D I+ W + + + + G + S+ N +G +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 430 GADNGTMCFWDW 441
++ + W
Sbjct: 248 SGCQDSLRVYGW 259
Score = 150 (57.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ GH G V V P A+GS+D+ I+ WDL ++ + G G VR +
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF 239
Query: 270 SPRHPYLFS-CGDDRTVKCWDLE 291
+P L+S C D V W+ E
Sbjct: 240 NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + ++R GH +++ ++ HP + + + +D+ ++WD+R K V+ GH+
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 77 TI 78
+
Sbjct: 149 AV 150
Score = 82 (33.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
GH S V ++ L+ T + LI AG S + RVWD+ + TL GH I S+
Sbjct: 61 GHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL 111
Score = 73 (30.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 192 (72.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 209 WKLYRVISGHLGWVRCVAV-EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
WKL +++ H V + + + ATG D + +W + +SLTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
++ + + +++ WDLE A + M ++ I S+ F G + + D
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 328 TVKL-----------YKEDDSATE--ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
+KL Y+ A P + + + D T++LWDL AGK +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
H V V HP Y+ AS S D I+ W + + + + G + S+ N +G +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 430 GADNGTMCFWDW 441
++ + W
Sbjct: 248 SGCQDSLRVYGW 259
Score = 150 (57.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++ GS +IR+WDL A K L TL HK ++ S+ HP AS S D NIK W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 404 KFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ GH+ + + + +G L S AD+ T+ WD G
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ GH G V V P A+GS+D+ I+ WDL ++ + G G VR +
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF 239
Query: 270 SPRHPYLFS-CGDDRTVKCWDLE 291
+P L+S C D V W+ E
Sbjct: 240 NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 92 (37.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
V + ++R GH +++ ++ HP + + + +D+ ++WD+R K V+ GH+
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 77 TI 78
+
Sbjct: 149 AV 150
Score = 82 (33.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIASV 81
GH S V ++ L+ T + LI AG S + RVWD+ + TL GH I S+
Sbjct: 61 GHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL 111
Score = 73 (30.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 32 HLSSVNTISLHPTID-VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
H S+V+++ L +L T G D +W + + +LTGHT+ + SV
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 178 (67.7 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 67/243 (27%), Positives = 98/243 (40%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SGH W+ P AT S D IK+WDL G+ L+L GH +V T +
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQP-GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+ S D T K WD+ + G DS + I F N L+T ADKT+ ++
Sbjct: 459 VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNI---LLTASADKTLSVWDA 515
Query: 335 DDSATEES-----HPV----------ITGSHDC--TIRLWDLAAGKSLCTLTNHKKSVRS 377
E+S H V I S D +LWD + ++ S
Sbjct: 516 RTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNE 575
Query: 378 VALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTM 436
V + + A AS + I + I L GH + ++S+ ++ G L SG +GT+
Sbjct: 576 VNFDQSGRVLAQASANGIIHLLDLKSGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTI 635
Query: 437 CFW 439
W
Sbjct: 636 RLW 638
Score = 155 (59.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 54/208 (25%), Positives = 84/208 (40%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
+KL + H V C+ + P ++ + S D++ K+ L G + L+ +GH + G
Sbjct: 350 YKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCC 409
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
P L + D T+K WDL NK ++S T+ + G + + D T
Sbjct: 410 FHPSGSKLATSSGDSTIKLWDL--NKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMT 467
Query: 329 VK------------LYKEDDSATE-ESHP----VITGSHDCTIRLWDLAAGKSLCTLTNH 371
K LY DS E P ++T S D T+ +WD GK +L H
Sbjct: 468 SKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGH 527
Query: 372 KKSVRSVALHPTLYMFASASPDNI-KQW 398
SV P ++ AS + K W
Sbjct: 528 MHSVNDATFTPRGHIIASCDARGVTKLW 555
Score = 154 (59.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 54/178 (30%), Positives = 71/178 (39%)
Query: 197 ALPMPKPQWHAPWKLYR-VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
+L M W + R + GH V + P + T SADK + VWD TGK +
Sbjct: 463 SLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQ 522
Query: 256 SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN 315
SL GH+ SV T +PR + SC K WD P+ + SG + FD
Sbjct: 523 SLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR-KLIPIVSIDVGPSSGN-EVNFDQ 580
Query: 316 SGSRLITTEADKTVKLY--KEDD-----SATEESHPVI---------TGSHDCTIRLW 357
SG L A+ + L K E H V+ +G D TIRLW
Sbjct: 581 SGRVLAQASANGIIHLLDLKSGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 36/100 (36%), Positives = 47/100 (47%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKF 405
T S D TI+LWDL G+ TL H +V S H ASAS D K W +
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 478
Query: 406 IQNLPGHNAIINSI-CVNNEGVLVSGADNGTMCFWDWRTG 444
L GH +NSI +L++ + + T+ WD RTG
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTG 518
Score = 81 (33.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTN 76
VG +G V+ GH ++ HP+ L T+ DST ++WD+ TL GH +
Sbjct: 387 VGLPQG-NVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNH 445
Query: 77 TIAS 80
+ S
Sbjct: 446 AVWS 449
Score = 59 (25.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDV--RTKANVY-TLTGHTNTIASVVTQASEP 88
H V+ I +HP D LI+ D R+W + + NV T +GHT+ ++ S
Sbjct: 359 HELPVSCIVMHPCRDYLISCSED---RLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 415
Query: 89 QVGTKT 94
++ T +
Sbjct: 416 KLATSS 421
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 275 YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+L G RT+ C+ E+ + + GS D + G+ ++ S L+ TE K K
Sbjct: 110 FLIKMGMTRTLDCFQAEWYELIQKKGS-DFK-GLGNVPDVYSQVMLLETENKNLKKELKH 167
Query: 335 DDSATEES 342
A E++
Sbjct: 168 FKQAAEKA 175
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSG 317
G T+K D+ + + PV GS +S S I + D +G
Sbjct: 251 GLQATLKNIDMGHIQVPVIKGSYESAS-ITRESGDRAG 287
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 58/215 (26%), Positives = 100/215 (46%)
Query: 249 ATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY---------NKAPVQP 299
A KL +L GH S+ SP YL + D+TVK W++++ +K V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 300 GSMDSESG-IFSMTFDNSGS--RLITTEADKTVK---LYKEDDSATEESHPVITGSHDCT 353
+ S+S + S + D + ++T+ KT+K Y + +S V++GS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL-PG 411
+R+WD+ G + TL H V +V+ + + AS S D ++ W G+ I+ L
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 412 HNAIINSICVNNEG--VLVSGADNGTMCFWDWRTG 444
N + + + G +L S D+ T+ WD+ G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDS-TLKLWDFSKG 288
Score = 161 (61.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 59/241 (24%), Positives = 106/241 (43%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH V +A + + S DK +K++++ T ++ +L GH V +P+
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 273 HPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNS----GS-----RLIT 322
+ S D +V+ WD++ P D S + S D S GS R+
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV-SFNRDGSLIASGSYDGLVRIWD 241
Query: 323 TEADKTVKLYKEDDS---ATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
T + +K +D++ A + P ++ + D T++LWD + GK+L T H+ S
Sbjct: 242 TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSK 301
Query: 376 RSVALHPTLY---MFASASPD-NIKQWKCPEGKFIQNLPGHNA-IINSICVNNEGVLVSG 430
+ + ++ S S D I W + +Q L GH ++ S C + ++ SG
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 431 A 431
A
Sbjct: 362 A 362
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/221 (23%), Positives = 97/221 (43%)
Query: 173 PSTE-NQLVPTTASNTQIIQQAKAKALPMPKP-----QWHAPWKLYRVISGHLGWVRCVA 226
PST N + P+ + T A A+ P P A +KL + GH +
Sbjct: 37 PSTSPNSISPSNPTGTPA-PGASAQT-PNPNAAGASASGSANYKLMCTLEGHTKSISSAK 94
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
P ++ T SADK +K+W++ + +LTGH V + S + S DD+T+K
Sbjct: 95 FSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLK 154
Query: 287 CWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA---TEESH 343
+++ ++ + + +F F+ S +++ D++V+++ T +H
Sbjct: 155 IFEIVTSR--MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAH 212
Query: 344 --PV------------ITGSHDCTIRLWDLAAGKSLCTLTN 370
PV +GS+D +R+WD A G+ + TL +
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Score = 86 (35.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS--PDN-IKQWK 399
+I+GS DC I +W+L + + L H + V + HP + AS + PDN I W+
Sbjct: 316 IISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWR 373
Score = 82 (33.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P ++++ D + R+WDV+T + TL H++ +++V
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Score = 69 (29.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
GH S+++ P L T+ D T ++W++ TLTGH
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGH 128
Score = 40 (19.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 70 TLTGHTNTIASVVTQASEPQVGTKT 94
TL GHT +I+S +GT +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSS 106
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 58/215 (26%), Positives = 100/215 (46%)
Query: 249 ATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY---------NKAPVQP 299
A KL +L GH S+ SP YL + D+TVK W++++ +K V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 300 GSMDSESG-IFSMTFDNSGS--RLITTEADKTVK---LYKEDDSATEESHPVITGSHDCT 353
+ S+S + S + D + ++T+ KT+K Y + +S V++GS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL-PG 411
+R+WD+ G + TL H V +V+ + + AS S D ++ W G+ I+ L
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 412 HNAIINSICVNNEG--VLVSGADNGTMCFWDWRTG 444
N + + + G +L S D+ T+ WD+ G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDS-TLKLWDFSKG 288
Score = 161 (61.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 59/241 (24%), Positives = 106/241 (43%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R ++GH V +A + + S DK +K++++ T ++ +L GH V +P+
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 273 HPYLFSCGDDRTVKCWDLEYNKA-PVQPGSMDSESGIFSMTFDNS----GS-----RLIT 322
+ S D +V+ WD++ P D S + S D S GS R+
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV-SFNRDGSLIASGSYDGLVRIWD 241
Query: 323 TEADKTVKLYKEDDS---ATEESHP----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSV 375
T + +K +D++ A + P ++ + D T++LWD + GK+L T H+ S
Sbjct: 242 TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSK 301
Query: 376 RSVALHPTLY---MFASASPD-NIKQWKCPEGKFIQNLPGHNA-IINSICVNNEGVLVSG 430
+ + ++ S S D I W + +Q L GH ++ S C + ++ SG
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 431 A 431
A
Sbjct: 362 A 362
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/221 (23%), Positives = 97/221 (43%)
Query: 173 PSTE-NQLVPTTASNTQIIQQAKAKALPMPKP-----QWHAPWKLYRVISGHLGWVRCVA 226
PST N + P+ + T A A+ P P A +KL + GH +
Sbjct: 37 PSTSPNSISPSNPTGTPA-PGASAQT-PNPNAAGASASGSANYKLMCTLEGHTKSISSAK 94
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
P ++ T SADK +K+W++ + +LTGH V + S + S DD+T+K
Sbjct: 95 FSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLK 154
Query: 287 CWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA---TEESH 343
+++ ++ + + +F F+ S +++ D++V+++ T +H
Sbjct: 155 IFEIVTSR--MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAH 212
Query: 344 --PV------------ITGSHDCTIRLWDLAAGKSLCTLTN 370
PV +GS+D +R+WD A G+ + TL +
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Score = 86 (35.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS--PDN-IKQWK 399
+I+GS DC I +W+L + + L H + V + HP + AS + PDN I W+
Sbjct: 316 IISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWR 373
Score = 82 (33.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
GH + V + +P ++++ D + R+WDV+T + TL H++ +++V
Sbjct: 169 GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Score = 69 (29.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
GH S+++ P L T+ D T ++W++ TLTGH
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGH 128
Score = 40 (19.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 70 TLTGHTNTIASVVTQASEPQVGTKT 94
TL GHT +I+S +GT +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSS 106
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 144 (55.7 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
+GH G V +++ P F +G+ D K+WD+ G + S TGHV + ++ P + Y
Sbjct: 181 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFP-NGY 239
Query: 276 LFSCG-DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
F+ G DD T + +DL ++ + + GI S+ F SG L+ D ++
Sbjct: 240 AFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW-- 297
Query: 335 DDSATEESHPVITGSHD 351
D+ + V+ G HD
Sbjct: 298 -DTLKGDRAGVLAG-HD 312
Score = 135 (52.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEG 403
++T S D T LWD+ + T T H V S++L P + F S + D + K W +G
Sbjct: 157 IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDG 216
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWR 442
Q+ GH + IN++ G +G+D+ T +D R
Sbjct: 217 MCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLR 256
Score = 126 (49.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
++ R + GH G++ C ++ T S D +WD+ T + + TGH G V L++
Sbjct: 134 RVSRELPGHTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSL 192
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
SP S D + K WD+ + S I +++F +G T D T
Sbjct: 193 SPDMRTFVSGACDASSKLWDIRDGMC--RQSFTGHVSDINAVSFFPNGYAFATGSDDATC 250
Query: 330 KLYKEDDSATEESHPVITGSHDCTI-RLWDLAAGKS 364
+L+ D A +E ++ SHD I + +A KS
Sbjct: 251 RLF--DLRADQE---LLLYSHDNIICGITSVAFSKS 281
Score = 94 (38.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 337 SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NI 395
S + + ++G+ D + +LWD+ G + T H + +V+ P Y FA+ S D
Sbjct: 191 SLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATC 250
Query: 396 KQWKCPEGKFIQNLPGHNAI--INSICVNNEG-VLVSGADNGTMCFWDWRTG 444
+ + + + N I I S+ + G +L++G D+ WD G
Sbjct: 251 RLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKG 302
Score = 92 (37.4 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 32/127 (25%), Positives = 52/127 (40%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLAT--GKLKLS--LTGHVGSVRGLTVSPRHPYL 276
WV A P + A G D I +++L T G +++S L GH G + +
Sbjct: 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIV 158
Query: 277 FSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKED 335
S GD T WD+E + Q + SG + S++ ++ D + KL+
Sbjct: 159 TSSGDT-TCALWDIETAQ---QTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIR 214
Query: 336 DSATEES 342
D +S
Sbjct: 215 DGMCRQS 221
Score = 84 (34.6 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKK---SVRSVALHPTLYMFASASPD-NIKQWKCPE 402
TGS D T RL+DL A + L L +H + SVA + + + D N W +
Sbjct: 243 TGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLK 301
Query: 403 GKFIQNLPGHNAIINSICVNNEGVLVS-GADNGTMCFWD 440
G L GH+ ++ + V ++G+ V+ G+ + + W+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 76 (31.8 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNT 77
G+VR V R GH ++ ++ ++G D+T +WD+ T T TGH+
Sbjct: 131 GNVR---VSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCALWDIETAQQTTTFTGHSGD 186
Query: 78 IASV 81
+ S+
Sbjct: 187 VMSL 190
Score = 51 (23.0 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 17 VGSVRGLTVIRHYHGHLSSVNTISLHPTID--VLITAGRDSTARVWDVRTKANVYTL 71
VG ++ + R GHL+ + ++H D +L++A +D +WD T ++ +
Sbjct: 40 VGRIQ-MRTRRTLRGHLAKI--YAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAI 93
Score = 46 (21.3 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 339 TEESHPVITGSHDCTIRLWD 358
T++ V TGS D +R+W+
Sbjct: 321 TDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 134 (52.2 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 329 VKLYKE--DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
+K +KE D A E+ +++ S D T+++W++ GK+ H+ +V S A+ P
Sbjct: 1042 LKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR 1101
Query: 387 FASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTG 444
F+S S D K W + L GH A + + + +L +G D G + WD TG
Sbjct: 1102 FSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTG 1161
Score = 133 (51.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 50/244 (20%), Positives = 97/244 (39%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL--------ATGKLKLSLTGHVGSVRGLT 268
GH WV CV F T S D+ I++W+ A K +L + H G V L
Sbjct: 879 GHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILA 938
Query: 269 V-SPRHPYLFSCGDDRTVKCWDLEYN-------KAPVQPGSMDSESGIFSMTFDNSGSRL 320
+ + +H L + D + + + + ++ + E+G + G L
Sbjct: 939 IYNQKHIQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVL 998
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
+ EA +T + T + +I+ +HD I++W+ + + L HK++++ A
Sbjct: 999 TSREAYRTSVQHCR---FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAF 1054
Query: 381 HPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFW 439
+ + + +K W GK ++ H + S V+ +G S + T W
Sbjct: 1055 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1114
Query: 440 DWRT 443
+ +
Sbjct: 1115 SFES 1118
Score = 116 (45.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 30/82 (36%), Positives = 38/82 (46%)
Query: 211 LYRVISGHLGWVRCVAVEP--GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
LY V H V C G AT S D IK+WDL + ++ GHV +V
Sbjct: 691 LY-VYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCR 749
Query: 269 VSPRHPYLFSCGDDRTVKCWDL 290
SP Y+ SC D TVK W++
Sbjct: 750 FSPNDDYIASCSTDGTVKLWNV 771
Score = 113 (44.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H G V AV P F++ SADK K+W + + L GH VR SP + L
Sbjct: 1086 HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNK-LL 1144
Query: 278 SCGDDR-TVKCWDL 290
+ GDD+ ++ WD+
Sbjct: 1145 ATGDDKGDIRIWDI 1158
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 31/85 (36%), Positives = 41/85 (48%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK---LSLT------GHVGSVR 265
+ GH VRC A P N+ ATG I++WD+ TG+L S+T H G V
Sbjct: 1125 LKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVT 1184
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDL 290
L+ SP L S G +K WD+
Sbjct: 1185 DLSFSPDSKMLVSSGG--YLKWWDV 1207
Score = 103 (41.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 205 WHAPWKLYRVI--SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W+ W+L + GH ++ A N + S D +KVW++ TGK + H G
Sbjct: 1032 WN--WQLNECVFLKGHKEAIKDFAFLE-NSKLLSWSFDGTVKVWNITTGKTEKDFACHRG 1088
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+V VSP S D+T K W E + V E+ + F S ++L+
Sbjct: 1089 AVLSCAVSPDGSRFSSTSADKTAKIWSFE--SSSVLHELKGHEACVRCSAFSPS-NKLLA 1145
Query: 323 TEADK 327
T DK
Sbjct: 1146 TGDDK 1150
Score = 88 (36.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 39/160 (24%), Positives = 68/160 (42%)
Query: 187 TQIIQQAKAKALPMPKPQWHAPW-------KLYR-VISGHLGWVRCVAVEPGNEWFATGS 238
+++ QQAK +A ++ W L R V+ H V + A+
Sbjct: 575 SEVYQQAKLRA-QRETGTFYLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCG 633
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ 298
ADK ++V+ +G+ L ++ H + T S Y+ +C D+ VK W+ K +
Sbjct: 634 ADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKC-LY 692
Query: 299 PGSMDSESGIFSMTFDNS-GSRLITTEADKT-VKLYKEDD 336
+E + F+N G L+ T +D T +KL+ D
Sbjct: 693 VYEEHTEQ-VNCCQFNNRRGQYLLATCSDDTYIKLWDLKD 731
Score = 63 (27.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+++ L+ + GH S V+ ++ + +T+ D T R+W+
Sbjct: 867 NIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 909
Score = 62 (26.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH+++V+ P D + + D T ++W+V + + T+ I A E Q
Sbjct: 740 GHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIE-----IKDFFRNADEQQD 794
Query: 91 GTKTVLLESC 100
+ VL++ C
Sbjct: 795 DVE-VLVKCC 803
Score = 60 (26.2 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 29 YHGHLSSVNTISLHPTID--VLITAGRDSTARVWDVRTKANVYTLTGHTNTIA 79
Y H VN + +L T D+ ++WD++ K T+ GH N ++
Sbjct: 694 YEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVS 746
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
++ WD+ G+SL T + +++S+ + P ++ + DN+
Sbjct: 1202 LKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVTV--DNL 1241
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 50 TAGRDSTARVWDVRTKANVYTLTGHTNTI 78
T D ++W+ RT +Y HT +
Sbjct: 673 TCSADKKVKIWNSRTGKCLYVYEEHTEQV 701
Score = 46 (21.3 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
V+ + +SV LI++ D+ +VW+ + V+ L GH I
Sbjct: 997 VLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAI 1049
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGT 92
+ + G D T +V+ + + ++ H + I A + V T
Sbjct: 629 IASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVAT 673
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 134 (52.2 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 329 VKLYKE--DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYM 386
+K +KE D A E+ +++ S D T+++W++ GK+ H+ +V S A+ P
Sbjct: 1043 LKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR 1102
Query: 387 FASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTG 444
F+S S D K W + L GH A + + + +L +G D G + WD TG
Sbjct: 1103 FSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTG 1162
Score = 133 (51.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 50/244 (20%), Positives = 97/244 (39%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDL--------ATGKLKLSLTGHVGSVRGLT 268
GH WV CV F T S D+ I++W+ A K +L + H G V L
Sbjct: 880 GHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILA 939
Query: 269 V-SPRHPYLFSCGDDRTVKCWDLEYN-------KAPVQPGSMDSESGIFSMTFDNSGSRL 320
+ + +H L + D + + + + ++ + E+G + G L
Sbjct: 940 IYNQKHIQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVL 999
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
+ EA +T + T + +I+ +HD I++W+ + + L HK++++ A
Sbjct: 1000 TSREAYRTSVQHCR---FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAF 1055
Query: 381 HPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFW 439
+ + + +K W GK ++ H + S V+ +G S + T W
Sbjct: 1056 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1115
Query: 440 DWRT 443
+ +
Sbjct: 1116 SFES 1119
Score = 116 (45.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 30/82 (36%), Positives = 38/82 (46%)
Query: 211 LYRVISGHLGWVRCVAVEP--GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
LY V H V C G AT S D IK+WDL + ++ GHV +V
Sbjct: 692 LY-VYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCR 750
Query: 269 VSPRHPYLFSCGDDRTVKCWDL 290
SP Y+ SC D TVK W++
Sbjct: 751 FSPNDDYIASCSTDGTVKLWNV 772
Score = 113 (44.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF 277
H G V AV P F++ SADK K+W + + L GH VR SP + L
Sbjct: 1087 HRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNK-LL 1145
Query: 278 SCGDDR-TVKCWDL 290
+ GDD+ ++ WD+
Sbjct: 1146 ATGDDKGDIRIWDI 1159
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 31/85 (36%), Positives = 41/85 (48%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK---LSLT------GHVGSVR 265
+ GH VRC A P N+ ATG I++WD+ TG+L S+T H G V
Sbjct: 1126 LKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVT 1185
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDL 290
L+ SP L S G +K WD+
Sbjct: 1186 DLSFSPDSKMLVSSGG--YLKWWDV 1208
Score = 103 (41.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 205 WHAPWKLYRVI--SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
W+ W+L + GH ++ A N + S D +KVW++ TGK + H G
Sbjct: 1033 WN--WQLNECVFLKGHKEAIKDFAFLE-NSKLLSWSFDGTVKVWNITTGKTEKDFACHRG 1089
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+V VSP S D+T K W E + V E+ + F S ++L+
Sbjct: 1090 AVLSCAVSPDGSRFSSTSADKTAKIWSFE--SSSVLHELKGHEACVRCSAFSPS-NKLLA 1146
Query: 323 TEADK 327
T DK
Sbjct: 1147 TGDDK 1151
Score = 88 (36.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 39/160 (24%), Positives = 68/160 (42%)
Query: 187 TQIIQQAKAKALPMPKPQWHAPW-------KLYR-VISGHLGWVRCVAVEPGNEWFATGS 238
+++ QQAK +A ++ W L R V+ H V + A+
Sbjct: 576 SEVYQQAKLRA-QRETGTFYLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCG 634
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ 298
ADK ++V+ +G+ L ++ H + T S Y+ +C D+ VK W+ K +
Sbjct: 635 ADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKC-LY 693
Query: 299 PGSMDSESGIFSMTFDNS-GSRLITTEADKT-VKLYKEDD 336
+E + F+N G L+ T +D T +KL+ D
Sbjct: 694 VYEEHTEQ-VNCCQFNNRRGQYLLATCSDDTYIKLWDLKD 732
Score = 63 (27.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 19 SVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
+++ L+ + GH S V+ ++ + +T+ D T R+W+
Sbjct: 868 NIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 910
Score = 62 (26.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH+++V+ P D + + D T ++W+V + + T+ I A E Q
Sbjct: 741 GHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIE-----IKDFFRNADEQQD 795
Query: 91 GTKTVLLESC 100
+ VL++ C
Sbjct: 796 DVE-VLVKCC 804
Score = 60 (26.2 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 29 YHGHLSSVNTISLHPTID--VLITAGRDSTARVWDVRTKANVYTLTGHTNTIA 79
Y H VN + +L T D+ ++WD++ K T+ GH N ++
Sbjct: 695 YEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVS 747
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 354 IRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
++ WD+ G+SL T + +++S+ + P ++ + DN+
Sbjct: 1203 LKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVTV--DNL 1242
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 50 TAGRDSTARVWDVRTKANVYTLTGHTNTI 78
T D ++W+ RT +Y HT +
Sbjct: 674 TCSADKKVKIWNSRTGKCLYVYEEHTEQV 702
Score = 46 (21.3 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
V+ + +SV LI++ D+ +VW+ + V+ L GH I
Sbjct: 998 VLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAI 1050
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGT 92
+ + G D T +V+ + + ++ H + I A + V T
Sbjct: 630 IASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVAT 674
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-N 394
D +++ ++TG D + ++D + + L TL H K V SV HP+ + SASPD
Sbjct: 228 DLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDAT 287
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
I+ W P +Q + H + + + ++ G L+S +D+ F D +TG
Sbjct: 288 IRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTG 338
Score = 142 (55.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 34/111 (30%), Positives = 50/111 (45%)
Query: 224 CVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDR 283
C P F TG+ D IK+WDL + GH G + + S YL + DD
Sbjct: 355 CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS 414
Query: 284 TVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+VK WDL K + +D+ + S+ FD SG+ L D + + K+
Sbjct: 415 SVKLWDLRKLKN-FKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQ 464
Score = 126 (49.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKK--SVRSVALHPTLYMFASASPDN-IKQWKCP 401
+++ S D D+ G+ L +T+ S+ HP +F + + D+ IK W
Sbjct: 321 LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLK 380
Query: 402 EGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPK 460
E + N PGH+ I SI + G L + AD+ ++ WD R NF+ LQ+ + F
Sbjct: 381 ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLD--NNFEV 438
Query: 461 PSVFF 465
S+ F
Sbjct: 439 KSLIF 443
Score = 111 (44.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 170 ELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKL--YRVISGHLGWVRC--- 224
ELV T + T + + K + +P+ + P +L YR ++ H+G
Sbjct: 164 ELVGMTPEIIQKLQDKATVLTTERKKRGKTVPE-ELVKPEELSKYRQVASHVGLHSASIP 222
Query: 225 --VAVE--PGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
+A++ P + TG ADK + V+D +T ++ +L GH V + P +FS
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
D T++ W + N + VQ ES + ++ +G L+++ D+
Sbjct: 283 SPDATIRIWSVP-NTSCVQVVRAH-ESAVTGLSLHATGDYLLSSSDDQ 328
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 301 SMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT-EESHP--VI--TGSHDCTIR 355
S D + FS D R++T D+T S T + HP +I TG+ D I+
Sbjct: 324 SSDDQYWAFS---DIQTGRVLTKVTDET-----SGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 356 LWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLP-GHN 413
+WDL ++ H + S+A Y A+A+ D+ +K W + K + L +N
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 414 AIINSICVNNEGVLVS--GAD 432
+ S+ + G ++ G D
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD 456
Score = 85 (35.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
GH V ++ HP+ +++ +A D+T R+W V + V + H + + + A+
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHAT 317
Score = 62 (26.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + SV + ++ H S+V +SLH T D L+++ D D++T + +T
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 74 HTN 76
T+
Sbjct: 347 ETS 349
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-N 394
D +++ ++TG D + ++D + + L TL H K V SV HP+ + SASPD
Sbjct: 228 DLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDAT 287
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
I+ W P +Q + H + + + ++ G L+S +D+ F D +TG
Sbjct: 288 IRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTG 338
Score = 142 (55.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 34/111 (30%), Positives = 50/111 (45%)
Query: 224 CVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDR 283
C P F TG+ D IK+WDL + GH G + + S YL + DD
Sbjct: 355 CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS 414
Query: 284 TVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+VK WDL K + +D+ + S+ FD SG+ L D + + K+
Sbjct: 415 SVKLWDLRKLKN-FKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQ 464
Score = 126 (49.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKK--SVRSVALHPTLYMFASASPDN-IKQWKCP 401
+++ S D D+ G+ L +T+ S+ HP +F + + D+ IK W
Sbjct: 321 LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLK 380
Query: 402 EGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPK 460
E + N PGH+ I SI + G L + AD+ ++ WD R NF+ LQ+ + F
Sbjct: 381 ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLD--NNFEV 438
Query: 461 PSVFF 465
S+ F
Sbjct: 439 KSLIF 443
Score = 111 (44.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 170 ELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKL--YRVISGHLGWVRC--- 224
ELV T + T + + K + +P+ + P +L YR ++ H+G
Sbjct: 164 ELVGMTPEIIQKLQDKATVLTTERKKRGKTVPE-ELVKPEELSKYRQVASHVGLHSASIP 222
Query: 225 --VAVE--PGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
+A++ P + TG ADK + V+D +T ++ +L GH V + P +FS
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
D T++ W + N + VQ ES + ++ +G L+++ D+
Sbjct: 283 SPDATIRIWSVP-NTSCVQVVRAH-ESAVTGLSLHATGDYLLSSSDDQ 328
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 301 SMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT-EESHP--VI--TGSHDCTIR 355
S D + FS D R++T D+T S T + HP +I TG+ D I+
Sbjct: 324 SSDDQYWAFS---DIQTGRVLTKVTDET-----SGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 356 LWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLP-GHN 413
+WDL ++ H + S+A Y A+A+ D+ +K W + K + L +N
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 414 AIINSICVNNEGVLVS--GAD 432
+ S+ + G ++ G D
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD 456
Score = 85 (35.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
GH V ++ HP+ +++ +A D+T R+W V + V + H + + + A+
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHAT 317
Score = 62 (26.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + SV + ++ H S+V +SLH T D L+++ D D++T + +T
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 74 HTN 76
T+
Sbjct: 347 ETS 349
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 336 DSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-N 394
D +++ ++TG D + ++D + + L TL H K V SV HP+ + SASPD
Sbjct: 228 DLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDAT 287
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTG 444
I+ W P +Q + H + + + ++ G L+S +D+ F D +TG
Sbjct: 288 IRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTG 338
Score = 142 (55.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 34/111 (30%), Positives = 50/111 (45%)
Query: 224 CVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDR 283
C P F TG+ D IK+WDL + GH G + + S YL + DD
Sbjct: 355 CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS 414
Query: 284 TVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
+VK WDL K + +D+ + S+ FD SG+ L D + + K+
Sbjct: 415 SVKLWDLRKLKN-FKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQ 464
Score = 126 (49.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKK--SVRSVALHPTLYMFASASPDN-IKQWKCP 401
+++ S D D+ G+ L +T+ S+ HP +F + + D+ IK W
Sbjct: 321 LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLK 380
Query: 402 EGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPK 460
E + N PGH+ I SI + G L + AD+ ++ WD R NF+ LQ+ + F
Sbjct: 381 ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLD--NNFEV 438
Query: 461 PSVFF 465
S+ F
Sbjct: 439 KSLIF 443
Score = 111 (44.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 170 ELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKL--YRVISGHLGWVRC--- 224
ELV T + T + + K + +P+ + P +L YR ++ H+G
Sbjct: 164 ELVGMTPEIIQKLQDKATVLTTERKKRGKTVPE-ELVKPEELSKYRQVASHVGLHSASIP 222
Query: 225 --VAVE--PGN-EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
+A++ P + TG ADK + V+D +T ++ +L GH V + P +FS
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
D T++ W + N + VQ ES + ++ +G L+++ D+
Sbjct: 283 SPDATIRIWSVP-NTSCVQVVRAH-ESAVTGLSLHATGDYLLSSSDDQ 328
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 301 SMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT-EESHP--VI--TGSHDCTIR 355
S D + FS D R++T D+T S T + HP +I TG+ D I+
Sbjct: 324 SSDDQYWAFS---DIQTGRVLTKVTDET-----SGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 356 LWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLP-GHN 413
+WDL ++ H + S+A Y A+A+ D+ +K W + K + L +N
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 414 AIINSICVNNEGVLVS--GAD 432
+ S+ + G ++ G D
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD 456
Score = 85 (35.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQAS 86
GH V ++ HP+ +++ +A D+T R+W V + V + H + + + A+
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHAT 317
Score = 62 (26.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + SV + ++ H S+V +SLH T D L+++ D D++T + +T
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 74 HTN 76
T+
Sbjct: 347 ETS 349
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 193 (73.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 49/146 (33%), Positives = 71/146 (48%)
Query: 205 WH-APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W A L + + GH GWV VA P A+GS DK +++WD ATG L+ +L GH
Sbjct: 722 WDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNW 781
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
VR + SP L S D+TV+ WD +Q + S+ F G L +
Sbjct: 782 VRSVAFSPDGRLLASGSFDKTVRLWDPATGS--LQQTLRGHSDTVRSVAFSPDGRLLASG 839
Query: 324 EADKTVKLYKEDDSATEESHPVITGS 349
DKTV+L+ + + T + +I G+
Sbjct: 840 SFDKTVRLW-DPATGTLQQTLIIKGT 864
Score = 164 (62.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 41/109 (37%), Positives = 57/109 (52%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
+GS D T+RLWD A G TL H VRSVA P + AS S D ++ W G
Sbjct: 754 SGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSL 813
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQVR 453
Q L GH+ + S+ + +G +L SG+ + T+ WD TG Q L ++
Sbjct: 814 QQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIK 862
Score = 159 (61.0 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 65/223 (29%), Positives = 96/223 (43%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A+GS D+ +++WD ATG L+ +L GH G V + SP L S D+TV+ WD
Sbjct: 711 ASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGS 770
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
+Q + + S+ F G L + DKTV+L+ D AT + G H T+
Sbjct: 771 --LQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW---DPATGSLQQTLRG-HSDTV 824
Query: 355 RLWDLAAGKSLCTLTNHKKSVR-----SVALHPTLYMFASASPDNIKQWKCPEGKFIQ-N 408
R + L + K+VR + L TL + + + Q +G +I N
Sbjct: 825 RSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQ----DGSYISTN 880
Query: 409 LPGHNAIINSICVNN--------EGVLVSGAD----NGTMCFW 439
L N I S C NN +L++G D NG W
Sbjct: 881 LGSLN--IQSRCGNNLSSSPKMHSDILINGPDWISVNGREVLW 921
Score = 139 (54.0 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 49/153 (32%), Positives = 70/153 (45%)
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLYKE 334
L S DD TV+ WD +Q +++ SG + S+ F G L + DKTV+L+
Sbjct: 710 LASGSDDETVRLWDPATGS--LQQ-TLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDP 766
Query: 335 DDSATEES---H----------P----VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
+ +++ H P + +GS D T+RLWD A G TL H +VRS
Sbjct: 767 ATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRS 826
Query: 378 VALHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
VA P + AS S D ++ W G Q L
Sbjct: 827 VAFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 66 (28.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 47 VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
VL + D T R+WD T + TL GH+ + SV
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSV 743
Score = 47 (21.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 66 ANVYTLTGHTNTIASVVTQASEPQ 89
A + TL GH+N++ +V+ S+ +
Sbjct: 694 AELQTLEGHSNSVWAVLASGSDDE 717
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 52/173 (30%), Positives = 76/173 (43%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEW-FATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
+L I GH + C P + ATGS D ++WD TG K +L GH G V G++
Sbjct: 143 RLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVS 202
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNK--APVQPGSMDSESGIF--SMTFDNSGS-RLITT 323
SP L +C D+TV+ WD E K G GI + G+ RL++
Sbjct: 203 WSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSA 262
Query: 324 EADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVR 376
D T +++ + TE GS C +R W G + +H K+V+
Sbjct: 263 SKDFTARIWTVNTGRTEHVLSGHKGSVSC-VR-WGAGNGTGVVYTASHDKTVK 313
Score = 157 (60.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 68/249 (27%), Positives = 101/249 (40%)
Query: 214 VISGHLGWVRCVAVEPGNEWFA--TGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
V+SGH G V CV GN T S DK +KVWD G L L H V L +S
Sbjct: 281 VLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALST 340
Query: 272 R---------HPYLF-SCGDDRTVKCWDLEYNKAPVQPGS----MDSESGIFSM-TFD-- 314
H + +++T K + Y KA G + S S F+M FD
Sbjct: 341 DFVCRTGFFDHTKTVPATAEEKTAKAKE-RYEKAARVGGKIVERLVSASDDFTMYLFDPL 399
Query: 315 NSGSRLITTEADKTVKLYKEDDSAT--EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHK 372
N G++ I + + K+ + T + + + D +LW+ GK + TL H
Sbjct: 400 NDGTKPIA----RMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHV 455
Query: 373 KSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SG 430
V + + +AS D +K W GK +LPGH + + + +G V SG
Sbjct: 456 APVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSG 515
Query: 431 ADNGTMCFW 439
+ + W
Sbjct: 516 GRDKAVRLW 524
Score = 154 (59.3 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 81/312 (25%), Positives = 123/312 (39%)
Query: 162 HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGW 221
H I C + P++ +L + NT I A+ PK H + GH GW
Sbjct: 151 HGEPILCAQFSPASSARLATGSGDNTARIWDAETGT---PK---HT-------LKGHAGW 197
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPRH------P 274
V V+ P AT S DK +++WD TGK + L GH V+G+ P H P
Sbjct: 198 VLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTP 257
Query: 275 YLFSCGDDRTVKCWDLEYNKAP-VQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S D T + W + + V G S S + + +G + T DKTVK++
Sbjct: 258 RLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGV-VYTASHDKTVKVWD 316
Query: 334 -------ED--DSATEESHPVITGSHDCTIRLWD-------LAAGKSLCTLTNHKKSVRS 377
D A +H ++ C +D A K+ ++K+ R
Sbjct: 317 AVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARV 376
Query: 378 VALHPTLYMFASASPDNIKQWKCP--EG-KFIQNLPGHNAIINSICVNNEGVLVSGA--D 432
+ SAS D P +G K I + GH +N + + +G +++ A D
Sbjct: 377 GG--KIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWD 434
Query: 433 NGTMCFWDWRTG 444
N T W+ R G
Sbjct: 435 NATK-LWNARDG 445
Score = 144 (55.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 276 LFSCGDDRTVKCWD---------LEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
+++ D+TVK WD L+ + V ++ ++ + FD++ + T E +
Sbjct: 303 VYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAE-E 361
Query: 327 KTVKLYKEDDSATEESHPVI----TGSHDCTIRLWD-LAAG-KSLCTLTNHKKSVRSVAL 380
KT K + + A ++ + S D T+ L+D L G K + + H+K V V
Sbjct: 362 KTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTF 421
Query: 381 HPTLYMFASASPDNI-KQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCF 438
P M ASA DN K W +GKFI L GH A + + + +LV+ + + T+
Sbjct: 422 SPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKV 481
Query: 439 WDWRTG 444
W+ RTG
Sbjct: 482 WNVRTG 487
Score = 121 (47.7 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+I GH V V P A+ D K+W+ GK +L GHV V + S
Sbjct: 408 RMI-GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSAD 466
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQ-PGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
L + D T+K W++ K PG D ++ + + G R+ + DK V+L
Sbjct: 467 SRLLVTASKDTTLKVWNVRTGKLATDLPGHEDE---VYGVDWSPDGQRVGSGGRDKAVRL 523
Query: 332 YK 333
++
Sbjct: 524 WR 525
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 205 WHA-PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W+A K + GH+ V + + T S D +KVW++ TGKL L GH
Sbjct: 440 WNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDE 499
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCW 288
V G+ SP + S G D+ V+ W
Sbjct: 500 VYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 91 (37.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/121 (32%), Positives = 54/121 (44%)
Query: 1 VWDLATGK-LKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARV 59
+WD TGK + L GH V+G I HL T P L++A +D TAR+
Sbjct: 221 IWDPETGKQVGSELKGHAKWVQG---IAWEPLHLWRDGT----PR---LVSASKDFTARI 270
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTA-GFLLSCLP 118
W V T + L+GH +++ V A GT V S ++ + V G LL L
Sbjct: 271 WTVNTGRTEHVLSGHKGSVSCVRWGAGN---GTGVVYTASHDKTVKVWDAVKGTLLHDLK 327
Query: 119 S 119
S
Sbjct: 328 S 328
Score = 85 (35.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 28/113 (24%), Positives = 49/113 (43%)
Query: 291 EYNKAPVQP-GSMDSESGIFSMT--FDNSGSRLITTEADKTVKLYKEDDSATEESHPVIT 347
+ N P GSM + +G + T ++ + I T +Y+ SA +S ++T
Sbjct: 415 QVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSA--DSRLLVT 472
Query: 348 GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWK 399
S D T+++W++ GK L H+ V V P S D ++ W+
Sbjct: 473 ASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWR 525
Score = 78 (32.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 17 VGSVRGLTVIRH-YHGHLSSVNTISLHPTIDV-LITAGRDSTARVWDVRTKANVYTLTGH 74
V V+ ++ + H GH + P L T D+TAR+WD T +TL GH
Sbjct: 135 VFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGH 194
Query: 75 TNTIASV 81
+ V
Sbjct: 195 AGWVLGV 201
Score = 75 (31.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 25/82 (30%), Positives = 32/82 (39%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD TG K +L GH G V G +S P L T D T R+W
Sbjct: 179 IWDAETGTPKHTLKGHAGWVLG----------------VSWSPDGTRLATCSMDKTVRIW 222
Query: 61 DVRTKANVYT-LTGHTNTIASV 81
D T V + L GH + +
Sbjct: 223 DPETGKQVGSELKGHAKWVQGI 244
Score = 67 (28.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+W + TG+ + L+GH GSV + +R G+ + V + TA D T +VW
Sbjct: 270 IWTVNTGRTEHVLSGHKGSV---SCVRWGAGNGTGV-----------VYTASHDKTVKVW 315
Query: 61 DVRTKANVYTLTGHTNTI 78
D ++ L H + +
Sbjct: 316 DAVKGTLLHDLKSHAHWV 333
>ASPGD|ASPL0000053276 [details] [associations]
symbol:AN1056 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACD01000016 EMBL:BN001308 eggNOG:COG2319
OMA:WTASADK OrthoDB:EOG4BK8CJ RefSeq:XP_658660.1
ProteinModelPortal:Q5BEH4 STRING:Q5BEH4
EnsemblFungi:CADANIAT00001584 GeneID:2876832 KEGG:ani:AN1056.2
HOGENOM:HOG000206439 Uniprot:Q5BEH4
Length = 373
Score = 124 (48.7 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 217 GHLGWVRCVAVEP--GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP--- 271
GH +VR V G + +G AD I V+D+++G+ GH V+ L + P
Sbjct: 121 GHTDFVRSVVTTRVNGQDLLVSGGADAQILVFDISSGQRLHVWKGHAKGVQDLLIDPLTL 180
Query: 272 ----RHPYLFSCGDDRTVKCWDLEYNKAPVQ--PGSMDSESGIFSMTFDNSGSRLITTEA 325
+FS G DR ++ +DL + + ++ ++ + FD G L T A
Sbjct: 181 DDNSTEQIVFSAGSDREIRQFDLSKGSQDLTGTEALLAHDTNVYKLHFDQDGD-LWTASA 239
Query: 326 DKTVK-LYKED 335
DKT K L +ED
Sbjct: 240 DKTTKCLIRED 250
Score = 108 (43.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
WK ++ H +V+ V V+ W T D+ I+VW+ +TG+L + +GH V GL
Sbjct: 252 WKANLTLT-HPDYVKDVVVDERGGWVITACRDEEIRVWNRSTGQLYHTFSGHYEEVTGLV 310
Query: 269 VSPRHPYLFSCGDDRTVKCWDLE 291
+ L S D T++ W L+
Sbjct: 311 LLGT--MLVSVSIDATIRQWSLK 331
Score = 79 (32.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASAS 391
Y +D E VIT D IR+W+ + G+ T + H + V + L T M S S
Sbjct: 263 YVKDVVVDERGGWVITACRDEEIRVWNRSTGQLYHTFSGHYEEVTGLVLLGT--MLVSVS 320
Query: 392 PD-NIKQW 398
D I+QW
Sbjct: 321 IDATIRQW 328
Score = 67 (28.6 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 29 YHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVT 83
+ G + + ++ P +L D T WDV + GHT+ + SVVT
Sbjct: 77 FKGPTAPITSLCFSPNGRILFAGCWDKTIWSWDVNSTQRKLQYEGHTDFVRSVVT 131
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 173 (66.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 63/253 (24%), Positives = 115/253 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKII-KVWDLATGKLKLSLTGHVGSVRGLTVSP 271
+V++GH G V C+ + TGS+D + +VWD+ TG++ +L H +V L S
Sbjct: 254 KVLTGHTGSVLCLQYD--ERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS- 310
Query: 272 RHPYLFSCGDDRTVKCWDLEY-NKAPVQPGSMDSESGIFSMTFDN------SGSRLI--- 321
+ + +C DR++ WD+ ++ + + + + FD+ SG R I
Sbjct: 311 -NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 369
Query: 322 ---TTEADKTVKLYKEDDSATE-ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
T E +T+ +K + + V++GS D TIRLWD+ G L L H++ VR
Sbjct: 370 STSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 429
Query: 378 VALHPTLYMFASASPDNIKQW--------KCPEGKF-IQNLPGHNAIINSICVNNEGVLV 428
+ + + A IK W + P ++ L H+ + + + E ++
Sbjct: 430 IRFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQII 487
Query: 429 SGADNGTMCFWDW 441
S + + T+ WD+
Sbjct: 488 SSSHDDTILIWDF 500
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/240 (25%), Positives = 106/240 (44%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V C+ + +E +G D IK+WD + + LTGH GSV L R + +
Sbjct: 223 VYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSS 278
Query: 282 DRTV-KCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATE 340
D TV + WD+ N V + + + F N ++T D+++ ++ + S T+
Sbjct: 279 DSTVSRVWDV--NTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW-DMASPTD 333
Query: 341 -------------------ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ +++ S D TI++W + + + TL HK+ + +
Sbjct: 334 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 393
Query: 382 PTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
L + S S DN I+ W G ++ L GH ++ I +N+ + VSGA +G + WD
Sbjct: 394 DRLVV--SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWD 450
Score = 119 (46.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 48/186 (25%), Positives = 83/186 (44%)
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFD-NSGSRLITTEADKTVKLYKEDDSA 338
G +V C L+Y++ + GS DS S +D N+G L T L+ +
Sbjct: 258 GHTGSVLC--LQYDERVIVTGSSDST---VSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 312
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLC---TLTNHKKSVRSVALHPTLYMFASASPDNI 395
++T S D +I +WD+A+ + L H+ +V V Y+ +++ I
Sbjct: 313 L-----MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTI 366
Query: 396 KQWKCPEGKFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTGYNFQRLQ--- 451
K W +F++ L GH I C+ + ++VSG+ + T+ WD G + L+
Sbjct: 367 KVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 424
Query: 452 --VRCV 455
VRC+
Sbjct: 425 ELVRCI 430
Score = 60 (26.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTI 78
+I+ RD++ ++WD + + LTGHT ++
Sbjct: 233 IISGLRDNSIKIWDKTSLECLKVLTGHTGSV 263
Score = 46 (21.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 VWDLATGKLKLSLTGHVGSV 20
+WD + + LTGH GSV
Sbjct: 244 IWDKTSLECLKVLTGHTGSV 263
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 187 (70.9 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 52/191 (27%), Positives = 87/191 (45%)
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-------Y--NKAPVQPGSMDSESGIF 309
GH G V G + SP YL SC +D T + W +E Y + PV S F
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 310 SMTFDNSGSRLITTEADKTVKLYKE--DDSATEESHPVI----TGSHDCTIRLWDLAAGK 363
+ + +RL TT ++++ D T HP I TGS+D + RLW++ GK
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 364 SLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVN 422
+ H+ + +VA P + A+A D ++ W GK ++ + GH + S+ +
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 423 NEGVLVSGADN 433
+G +++ +
Sbjct: 857 CDGSILASGSS 867
Score = 162 (62.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R+ +GHL V P + ATGS DK ++W++ TGK GH + + SP
Sbjct: 757 RIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPD 816
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKL 331
L + G+D +V WDL K V+ MD + ++S+ F GS L + +D TV+L
Sbjct: 817 GRLLATAGEDTSVILWDLSTGKK-VK--KMDGHTKCVYSLDFSCDGSILASGSSDCTVRL 873
Query: 332 Y 332
+
Sbjct: 874 W 874
Score = 158 (60.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 296 PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE--DDSATEESHPVI----TGS 349
PV S F+ + +RL TT ++++ D T HP I TGS
Sbjct: 723 PVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGS 782
Query: 350 HDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKFIQN 408
+D + RLW++ GK + H+ + +VA P + A+A D ++ W GK ++
Sbjct: 783 NDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKK 842
Query: 409 LPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYN 446
+ GH + S+ + +G +L SG+ + T+ WD + +N
Sbjct: 843 MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFN 881
Score = 141 (54.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 293 NKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE------DDSATEESHPVI 346
+ PV S +S +++ +RL + E + YK D S +
Sbjct: 678 HSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFA 737
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD-NIKQWKCPEGKF 405
T SHD T RLW L T H +V HP + A+ S D + + W+ GK
Sbjct: 738 TASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKC 797
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNGT-MCFWDWRTGYNFQRLQ--VRCV 455
++ GH A I ++ + +G L++ A T + WD TG +++ +CV
Sbjct: 798 VRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCV 850
Score = 136 (52.9 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLA-TGKLKLSLTGHVGSVRGLTVSPRHPY 275
GH V V+ P +FAT S D+ ++W L++ TGH+ + P Y
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRI-FTGHLSDCNTVRFHPNINY 777
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
L + +D++ + W+++ K V+ M + I+++ F G L T D +V L+
Sbjct: 778 LATGSNDKSARLWEIQTGKC-VRI-FMGHRAPIYTVAFSPDGRLLATAGEDTSVILW--- 832
Query: 336 DSATEESHPVITGSHDCTIRL---WD---LAAGKSLCT--LTNHKKSVRS-VALHPT-LY 385
D +T + + G C L D LA+G S CT L + KK+ S ++ P+ L
Sbjct: 833 DLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLI 892
Query: 386 MFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLV-SGADNGTMCF 438
S +K K + ++ P + ++C + +L+ SGA N F
Sbjct: 893 NDESRKRKTLKS-KLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFNTLTAF 945
Score = 129 (50.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K R+ GH + VA P AT D + +WDL+TGK + GH V L
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDF 855
Query: 270 SPRHPYLFSCGDDRTVKCWDLE--YNKA-PVQPGSMDSESGIFSMTFDNS--GSRLITTE 324
S L S D TV+ WD++ +N + QP S+ ++ T + L+ T
Sbjct: 856 SCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRKTLKSKLFSDELLETY 915
Query: 325 ADKTVKLY 332
K +Y
Sbjct: 916 PTKQTPVY 923
Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + + ++ +R + GHLS NT+ HP I+ L T D +AR+W+++T V G
Sbjct: 744 TARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMG 803
Query: 74 HTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGT 109
H A + T A P E I++ L T
Sbjct: 804 HR---APIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Score = 79 (32.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
GH V S P L++ D+TAR+W + T +N+ GH
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGH 720
Score = 69 (29.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTG 73
T + S+ ++ + Y GH V +S P TA D TAR+W + + TG
Sbjct: 702 TARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTG 761
Query: 74 HTNTIASV 81
H + +V
Sbjct: 762 HLSDCNTV 769
Score = 47 (21.6 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 14 TGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
+ H+ S+ T+ Y G +NT + ++ DS+ ++W+++
Sbjct: 543 SSHLPSICFYTIFNTYQG----LNTTDISKDAQLVAGGFSDSSVKIWNLK 588
Score = 44 (20.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 70 TLTGHTNTIASVVTQASEPQVGTKTVL 96
T T + NT +S+ T P T T+L
Sbjct: 74 TPTPNPNTTSSISTSTPTPTTTTTTIL 100
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 33 LSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
+++ TIS + + ++ +T + T A T T T + +S T A
Sbjct: 124 ITATTTISPNTSSNITALPTTPTTPNITPTTTAATTTTTTTPTTSSSSSTTNA 176
Score = 39 (18.8 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 212 YRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDL 248
Y + + + G + + + A G +D +K+W+L
Sbjct: 552 YTIFNTYQG-LNTTDISKDAQLVAGGFSDSSVKIWNL 587
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 162 (62.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATG---KLKLSLTGHVGSVRGLTVSP 271
+ GH V+ VA P AT S DK + VW++ + L H V+ + P
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160
Query: 272 RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL 331
L S D TVK + E + ES ++S+ FD SG RL + D+TV++
Sbjct: 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220
Query: 332 YKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN-HKKSVRSVALHPTLYMFASA 390
+++ E+ +GS A+ K +CTL+ H +++ VA A+A
Sbjct: 221 WRQYLPGNEQG-VACSGSE---------ASWKCVCTLSGFHSRTIYDVAWCQLTGTLATA 270
Query: 391 SPDN-IKQWKCPEGKFIQ--------NLP-GHNAIINSICVN--NEGVLVSGADNGTMCF 438
D+ I+ ++ G Q ++P H+ +N + N G+L S +D+G + F
Sbjct: 271 CGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAF 330
Query: 439 WDWR 442
W ++
Sbjct: 331 WKYQ 334
Score = 64 (27.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK--ANVYTLTGHTNTIASV 81
GH +V ++ P + L +A D+T +W V TL GH N + SV
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSV 111
Score = 38 (18.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 39 ISLHPTIDVLITAGRDSTARVW 60
++ +P +L + G D + R+W
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIW 43
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 160 (61.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR- 272
V+ GH + + ++ TGS DK IKVW L K +L GH SV+ + R
Sbjct: 515 VLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNRE 574
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
HP L SCG D +K WD Y + + + + I++M N G T +AD + +
Sbjct: 575 HPQLLSCGADGLIKLWD--YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Query: 333 KEDDSATEE 341
++ TEE
Sbjct: 633 TDN---TEE 638
Score = 141 (54.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 65/250 (26%), Positives = 104/250 (41%)
Query: 208 PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK-----LSLTGHVG 262
P +L RV GH + V V +W AT S D ++W G+L+ GH G
Sbjct: 371 PLEL-RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRW-NGELQDFEPFARFQGHAG 428
Query: 263 SVRGLTVSP--RHP-YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSR 319
++ +++S P +L + D T+K W K P P S+ S
Sbjct: 429 AITAISLSKSQNEPKFLVTGSTDLTIKKW-----KIPNTPNSIVKTSEY----------- 472
Query: 320 LITTEA-DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T A DK + D S +E T S+D ++W +G+++ L HK+ + +
Sbjct: 473 --TRRAHDKDINSI--DVSPNDEYFA--TASYDKLGKVWQTDSGETIGVLKGHKRGLWDI 526
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGH-NAIINSICVNNEG--VLVSGADNG 434
+ + + S D IK W + + L GH N++ N E +L GAD G
Sbjct: 527 NFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGAD-G 585
Query: 435 TMCFWDWRTG 444
+ WD++ G
Sbjct: 586 LIKLWDYKQG 595
Score = 129 (50.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P P + T + D + N V P ++ + ++D G ++ T++ +T+
Sbjct: 460 PNTPNSIVKTSEYTRRAHDKDINSIDVSP----NDEYFATASYDKLG-KVWQTDSGETIG 514
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL---- 380
+ K D + + ++TGS D TI++W L TL H SV+ V
Sbjct: 515 VLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNRE 574
Query: 381 HPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCF 438
HP L S D IK W +G+ I++L H+ I ++ + N+G + AD +G + F
Sbjct: 575 HPQLL---SCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSF 631
Query: 439 WDWRTG--YNFQRLQVR 453
W T F+ LQ +
Sbjct: 632 WTDNTEEEVKFKELQAK 648
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
+ + V P +E+FAT S DK+ KVW +G+ L GH + + + +
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 282 DRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--YKEDD 336
D+T+K W L +++ G +S + F+ +L++ AD +KL YK+ +
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRV--KFFNREHPQLLSCGADGLIKLWDYKQGE 596
Score = 79 (32.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRD-STARV 59
VWD+ G + SL GH ++ LT +HG L+S D + +G T ++
Sbjct: 127 VWDIENGYVTHSLKGHGTTICSLT----FHGELNSQ---------DWRLASGDTMGTVKI 173
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
WD+ + ++TL H + V
Sbjct: 174 WDLVKRRCIHTLKDHNTAVRGV 195
Score = 64 (27.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 8/29 (27%), Positives = 21/29 (72%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKL 253
V++ ++F TG ++ ++K+WD+ +G++
Sbjct: 239 VSLIDDRQYFYTGGSENVLKIWDIKSGEM 267
Score = 64 (27.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
H +N+I + P + TA D +VW + + L GH
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGH 519
Score = 64 (27.6 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 34 SSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
S V S+ T + G D VWD+ ++L GH TI S+
Sbjct: 102 SPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSL 149
Score = 62 (26.9 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW----DVRTKANVYTLTGHTNTIASV 81
+R Y GH +N + + + TA +D+ AR+W +++ GH I ++
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Query: 82 VTQASE 87
S+
Sbjct: 434 SLSKSQ 439
Score = 58 (25.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTID---VLITAGRDSTARVWDVRT------KANV 68
G ++ + GH ++ ISL + + L+T D T + W + K +
Sbjct: 412 GELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSE 471
Query: 69 YTLTGHTNTIASVVTQASEPQVGT 92
YT H I S+ ++ T
Sbjct: 472 YTRRAHDKDINSIDVSPNDEYFAT 495
Score = 57 (25.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 13/79 (16%), Positives = 34/79 (43%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKL--KLSLTGHVGSVRGLTVSPR 272
+ H VR V + + F +G D ++ +++ K + + + +++
Sbjct: 185 LKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDD 244
Query: 273 HPYLFSCGDDRTVKCWDLE 291
Y ++ G + +K WD++
Sbjct: 245 RQYFYTGGSENVLKIWDIK 263
Score = 44 (20.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 25 VIRHYHGHLSSVNTIS-LHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+++ G+ + I + P ++L A R+ D+ + GHT+ + +V
Sbjct: 330 IVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAV 387
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 33 LSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ + +SL T G ++ ++WD+++
Sbjct: 233 IEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYT 70
H ++V + D+ I+ GRD+ +++ + + T
Sbjct: 188 HNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINT 226
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 160 (61.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR- 272
V+ GH + + ++ TGS DK IKVW L K +L GH SV+ + R
Sbjct: 515 VLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNRE 574
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
HP L SCG D +K WD Y + + + + I++M N G T +AD + +
Sbjct: 575 HPQLLSCGADGLIKLWD--YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Query: 333 KEDDSATEE 341
++ TEE
Sbjct: 633 TDN---TEE 638
Score = 141 (54.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 65/250 (26%), Positives = 104/250 (41%)
Query: 208 PWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK-----LSLTGHVG 262
P +L RV GH + V V +W AT S D ++W G+L+ GH G
Sbjct: 371 PLEL-RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRW-NGELQDFEPFARFQGHAG 428
Query: 263 SVRGLTVSP--RHP-YLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSR 319
++ +++S P +L + D T+K W K P P S+ S
Sbjct: 429 AITAISLSKSQNEPKFLVTGSTDLTIKKW-----KIPNTPNSIVKTSEY----------- 472
Query: 320 LITTEA-DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
T A DK + D S +E T S+D ++W +G+++ L HK+ + +
Sbjct: 473 --TRRAHDKDINSI--DVSPNDEYFA--TASYDKLGKVWQTDSGETIGVLKGHKRGLWDI 526
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGH-NAIINSICVNNEG--VLVSGADNG 434
+ + + S D IK W + + L GH N++ N E +L GAD G
Sbjct: 527 NFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGAD-G 585
Query: 435 TMCFWDWRTG 444
+ WD++ G
Sbjct: 586 LIKLWDYKQG 595
Score = 129 (50.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
P P + T + D + N V P ++ + ++D G ++ T++ +T+
Sbjct: 460 PNTPNSIVKTSEYTRRAHDKDINSIDVSP----NDEYFATASYDKLG-KVWQTDSGETIG 514
Query: 331 LYKE------DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL---- 380
+ K D + + ++TGS D TI++W L TL H SV+ V
Sbjct: 515 VLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNRE 574
Query: 381 HPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCF 438
HP L S D IK W +G+ I++L H+ I ++ + N+G + AD +G + F
Sbjct: 575 HPQLL---SCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSF 631
Query: 439 WDWRTG--YNFQRLQVR 453
W T F+ LQ +
Sbjct: 632 WTDNTEEEVKFKELQAK 648
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
+ + V P +E+FAT S DK+ KVW +G+ L GH + + + +
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 282 DRTVKCWDL-EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKL--YKEDD 336
D+T+K W L +++ G +S + F+ +L++ AD +KL YK+ +
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRV--KFFNREHPQLLSCGADGLIKLWDYKQGE 596
Score = 79 (32.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRD-STARV 59
VWD+ G + SL GH ++ LT +HG L+S D + +G T ++
Sbjct: 127 VWDIENGYVTHSLKGHGTTICSLT----FHGELNSQ---------DWRLASGDTMGTVKI 173
Query: 60 WDVRTKANVYTLTGHTNTIASV 81
WD+ + ++TL H + V
Sbjct: 174 WDLVKRRCIHTLKDHNTAVRGV 195
Score = 64 (27.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 8/29 (27%), Positives = 21/29 (72%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKL 253
V++ ++F TG ++ ++K+WD+ +G++
Sbjct: 239 VSLIDDRQYFYTGGSENVLKIWDIKSGEM 267
Score = 64 (27.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGH 74
H +N+I + P + TA D +VW + + L GH
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGH 519
Score = 64 (27.6 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 34 SSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
S V S+ T + G D VWD+ ++L GH TI S+
Sbjct: 102 SPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSL 149
Score = 62 (26.9 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW----DVRTKANVYTLTGHTNTIASV 81
+R Y GH +N + + + TA +D+ AR+W +++ GH I ++
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Query: 82 VTQASE 87
S+
Sbjct: 434 SLSKSQ 439
Score = 58 (25.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 18 GSVRGLTVIRHYHGHLSSVNTISLHPTID---VLITAGRDSTARVWDVRT------KANV 68
G ++ + GH ++ ISL + + L+T D T + W + K +
Sbjct: 412 GELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSE 471
Query: 69 YTLTGHTNTIASVVTQASEPQVGT 92
YT H I S+ ++ T
Sbjct: 472 YTRRAHDKDINSIDVSPNDEYFAT 495
Score = 57 (25.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 13/79 (16%), Positives = 34/79 (43%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKL--KLSLTGHVGSVRGLTVSPR 272
+ H VR V + + F +G D ++ +++ K + + + +++
Sbjct: 185 LKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDD 244
Query: 273 HPYLFSCGDDRTVKCWDLE 291
Y ++ G + +K WD++
Sbjct: 245 RQYFYTGGSENVLKIWDIK 263
Score = 44 (20.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 25 VIRHYHGHLSSVNTIS-LHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+++ G+ + I + P ++L A R+ D+ + GHT+ + +V
Sbjct: 330 IVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAV 387
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 33 LSSVNTISLHPTIDVLITAGRDSTARVWDVRT 64
+ + +SL T G ++ ++WD+++
Sbjct: 233 IEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYT 70
H ++V + D+ I+ GRD+ +++ + + T
Sbjct: 188 HNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINT 226
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 148 (57.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 54/211 (25%), Positives = 89/211 (42%)
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH + V + P W A+ SAD ++WD TG +L GH+ V L SP
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSG 235
Query: 275 YLFSCGDDRTVKCWDL----EYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT-----EA 325
L + DD+ ++ WD + Q G D+E G SG+ I A
Sbjct: 236 TLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPA 295
Query: 326 DKTVK-LYKEDD-----SATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
T + L + + + + + + +GS+D + LWD+ AG+ + +L H V +
Sbjct: 296 RGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGID 355
Query: 380 LHPTLYMFASASPDN-IKQWKCPEGKFIQNL 409
+ S S D I+ W G+ ++ L
Sbjct: 356 FCRDGTLVVSCSTDGLIRIWDTATGQCLRTL 386
Score = 135 (52.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPR 272
R + GH +V C+A P A+GS D+ + +WD+ G+L SL H V G+
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRD 359
Query: 273 HPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ SC D ++ WD + ++ + + ++ F +G ++ D ++L+
Sbjct: 360 GTLVVSCSTDGLIRIWDTATGQC-LRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLW 418
Score = 96 (38.9 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH + + + P + +A D TAR+WD T A++ TL GH +A V A P
Sbjct: 178 GHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGH---MAGVSCLAWSPDS 234
Query: 91 GT 92
GT
Sbjct: 235 GT 236
Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/148 (27%), Positives = 62/148 (41%)
Query: 305 ESGIFSMTFDNSGSRL---ITTEADKTVKLYKEDDSATE-ESH--PVITGSHDCTIRLWD 358
+SG + D+ RL IT E V DD A +H I+G+ +
Sbjct: 233 DSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGG 292
Query: 359 LAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIIN 417
A + L H V +A P + AS S D + W G+ +++LP H+ ++
Sbjct: 293 GPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVS 352
Query: 418 SICVNNEGVLV-SGADNGTMCFWDWRTG 444
I +G LV S + +G + WD TG
Sbjct: 353 GIDFCRDGTLVVSCSTDGLIRIWDTATG 380
Score = 90 (36.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 55/211 (26%), Positives = 83/211 (39%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLAT----------------------GKLK 254
GH+ V C+A P + ATGS DK I++WD T G +
Sbjct: 220 GHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTR 279
Query: 255 LS-LTG-HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMT 312
+S +G VG G R P L G V C + GS D +F
Sbjct: 280 ISGASGIGVGGGGGPARGTRRPLL---GHHNYVYCLAFSPKGNILASGSYDE--AVF--L 332
Query: 313 FDNSGSRLITTEADKTVKLYKEDDSATE---ESHPVITGSHDCTIRLWDLAAGKSLCTLT 369
+D RL+ +++ + + S + + V++ S D IR+WD A G+ L TL
Sbjct: 333 WDVRAGRLM-----RSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLV 387
Query: 370 NHKK-SVRSVALHPT-LYMFASASPDNIKQW 398
+ +V +V P Y+ A I+ W
Sbjct: 388 HEDNPAVTNVCFSPNGRYILAFNLDSCIRLW 418
Score = 76 (31.8 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 238 SADKIIKVWDLATGKLKLSLTGHVG-SVRGLTVSPRHPYLFSCGDDRTVKCWD 289
S D +I++WD ATG+ +L +V + SP Y+ + D ++ WD
Sbjct: 367 STDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWD 419
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
GH++ V+ ++ P L T D R+WD
Sbjct: 220 GHMAGVSCLAWSPDSGTLATGSDDKAIRLWD 250
Score = 46 (21.3 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 388 ASASPD-NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD 432
ASAS D +I W + +Q + H+ + + V + ++ +G D
Sbjct: 490 ASASEDGHIVLWDVKSKEVVQKIAAHDGVCFWVDVVGDTMVSAGKD 535
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 167 (63.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 60/242 (24%), Positives = 100/242 (41%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH W+ P + AT S D +K+WDL G L+ GH +V T ++
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 277 FSCGDDRTVKCWDLEYNKAPVQP-GSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
S D+T K WD+ + G DS + I F N+ L+T+ ADKT+ ++
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNT---LLTSSADKTLSIWDAR 508
Query: 336 DSATEES-----HPV----------ITGSHD-CTI-RLWDLAAGKSLCTLTNHKKSVRSV 378
E+S H + + S D C + +LWD + ++ V
Sbjct: 509 TGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEV 568
Query: 379 ALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMC 437
+ + A AS + + + I L GH +++ +++G +L SG +GT+
Sbjct: 569 NFDSSGRVLAQASGNGVIHLLDLKSGEIHKLMGHENEAHTVVFSHDGEILFSGGSDGTVR 628
Query: 438 FW 439
W
Sbjct: 629 TW 630
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 53/209 (25%), Positives = 85/209 (40%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
+KL + H V CV+++P + + D++ KV L + L+ GH +
Sbjct: 342 YKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCC 401
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSES-GIFSMTFDNSGSRLITTEADK 327
P L + D TVK WDL + + + S ++S T+ + G+ + ++ DK
Sbjct: 402 FHPSGDKLATSSGDTTVKLWDLCKGDCIL---TFEGHSRAVWSCTWHSCGNFVASSSLDK 458
Query: 328 TVK------------LYKEDDSATE-ESHP----VITGSHDCTIRLWDLAAGKSLCTLTN 370
T K LY DS E P ++T S D T+ +WD G +L
Sbjct: 459 TSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYG 518
Query: 371 HKKSVRSVALHPTLYMFASASPDNI-KQW 398
H S+ P +M AS + K W
Sbjct: 519 HMHSINDAIFDPRGHMIASCDACGVTKLW 547
Score = 130 (50.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 38/107 (35%), Positives = 49/107 (45%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-KQWKCPEGKF 405
T S D T++LWDL G + T H ++V S H AS+S D K W +
Sbjct: 411 TSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERC 470
Query: 406 IQNLPGHNAIINSI--CVNNEGVLVSGADNGTMCFWDWRTGYNFQRL 450
L GH +NSI + +L S AD T+ WD RTG Q L
Sbjct: 471 RCTLYGHTDSVNSIEFFPFSNTLLTSSADK-TLSIWDARTGICEQSL 516
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVR--TKANVY-TLTGHTNTIASVVTQASEP 88
H V+ +S+ P D+L++ G D R+W V K NV T GHT+ ++ S
Sbjct: 351 HELPVSCVSMQPHKDILVSCGED---RLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGD 407
Query: 89 QVGTKT 94
++ T +
Sbjct: 408 KLATSS 413
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 103 (41.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 32/101 (31%), Positives = 43/101 (42%)
Query: 198 LPMPKPQWHAPWKLYRVISGHLGWVRCVAVEP--GNEWFATGSADKIIKVWDLATGKLKL 255
L + P P KL +GH V + P G+ + G D +K+WD A G +
Sbjct: 283 LRLVTPDTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGM-DNTVKIWD-AYGDRRC 340
Query: 256 SLT--GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
T GH +VR + S SCG DR + WD E K
Sbjct: 341 IQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGK 381
Score = 102 (41.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 230 GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKCW 288
G W S +++ KL + TGH V + P++ +L S G D TVK W
Sbjct: 273 GRSWVDPPSDLRLVTPDTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIW 332
Query: 289 DLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
D ++ +Q M + + F N G R ++ D+ +L+
Sbjct: 333 DAYGDRRCIQT-YMGHSQAVRDICFSNDGRRFLSCGYDRQTRLW 375
Score = 99 (39.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK-SVRSVALHPTLYMFASASPDNIKQW 398
+++ +T S D ++R+WD + +++ S+ +VALHP FA+ S DN
Sbjct: 444 DDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILI 503
Query: 399 KCPEGKFIQNLP----GHNAIINSIC---VNNEGVLV-SGADNGTMCFWDWRT 443
+F N GHN + C + +G + SG G FWDW+T
Sbjct: 504 YSARDRFRMNKKKRFLGHN-VSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKT 555
Score = 99 (39.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT-GHVGSVRGLTVSPRHPY 275
GH VR + F + D+ ++WD TGK+ S T G +
Sbjct: 346 GHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFNPDDDKQE 405
Query: 276 LFSCG-DDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGSRLITTEADKTVKLY 332
F CG D+ + WD++ N+ VQ D G + ++TF + R +T+ DK+++++
Sbjct: 406 QFLCGGSDKKIIQWDIKSNQI-VQ--EYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVW 461
Score = 94 (38.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 350 HDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT----LYMFASASPDNIKQWKCPEGKF 405
+D RLWD GK L + TN K + +P S I QW +
Sbjct: 368 YDRQTRLWDTETGKILSSFTNGKIPY-CIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQI 426
Query: 406 IQNLPGHNAIINSIC-VNNEGVLVSGADNGTMCFWDW 441
+Q H +N+I +++ V+ +D+ ++ WDW
Sbjct: 427 VQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDW 463
Score = 88 (36.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 224 CVAVEPGN---EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
C+ P + E F G +DK I WD+ + ++ H+G+V +T + +
Sbjct: 394 CIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSS 453
Query: 281 DDRTVKCWD 289
DD++++ WD
Sbjct: 454 DDKSLRVWD 462
Score = 82 (33.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 25 VIRHYHGHLSSVNTISLHPTID-VLITAGRDSTARVWDVR-TKANVYTLTGHTNTIASV 81
+I +Y GH V I P +L++AG D+T ++WD + + T GH+ + +
Sbjct: 296 LIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRDI 354
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
W TKA + G N + S+ T +E Q
Sbjct: 201 WGT-TKAELDFKQGRENDMVSIETDLTEQQ 229
Score = 38 (18.4 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 65 KANVYTLTGHTNTIASV 81
K ++ TGHT +A++
Sbjct: 294 KKLIHNYTGHTKGVAAI 310
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 188 (71.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 78/316 (24%), Positives = 130/316 (41%)
Query: 144 EVQRHSVHTLVFR----SLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALP 199
+V R S +LV R S H I+ ST+N + TT + T I A A
Sbjct: 368 QVYRVSDGSLVARLSDDSAANNHRNSITENNTTTSTDNNTMTTTTTTT-ITTTAMTSAAE 426
Query: 200 MPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG 259
+ K + S L ++R V P ++ ATG+ D++I++WD+ K+ + L G
Sbjct: 427 LAKDVENL--NTSSSPSSDL-YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG 483
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFD-NSGS 318
H + L P L S DRTV+ WDL + + ++ E G+ ++ G
Sbjct: 484 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL---TLSIEDGVTTVAVSPGDGK 540
Query: 319 RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
+ D+ V+++ DS T + ++ D T +SV S
Sbjct: 541 YIAAGSLDRAVRVW---DSETGFLVERLDSENESGTGHKDSVYS---VVFTRDGQSVVSG 594
Query: 379 ALHPTLYMFASASPDNIKQWKCPE-GKFIQNLPGHNAIINSICV--NNEGVLVSGADNGT 435
+L ++ ++ + +N K P G GH + S+ N+E +L D G
Sbjct: 595 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 654
Query: 436 MCFWDWRTGYNFQRLQ 451
+ FWD ++G LQ
Sbjct: 655 L-FWDKKSGNPLLMLQ 669
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 59/222 (26%), Positives = 95/222 (42%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
K+ ++ GH + + P + +GS D+ +++WDL TG+ L+L+ G V + V
Sbjct: 476 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VTTVAV 534
Query: 270 SPRHPYLFSCGD-DRTVKCWDLEYNKAPVQPGSMDSESG------IFSMTFDNSGSRLIT 322
SP + G DR V+ WD E V+ ++ESG ++S+ F G +++
Sbjct: 535 SPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQSVVS 593
Query: 323 TEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHP 382
D++VKL+ + A +S S C + T HK V SVA
Sbjct: 594 GSLDRSVKLWNLQN-ANNKSDSKTPNSGTCEV------------TYIGHKDFVLSVATTQ 640
Query: 383 TLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNN 423
S S D + W G + L GH + S+ V N
Sbjct: 641 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 682
Score = 159 (61.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 61/193 (31%), Positives = 89/193 (46%)
Query: 222 VRCVAVEPGN-EWFATGSADKIIKVWDLATGKL--KL-----SLTGHVGSVRGLTVSPRH 273
V VAV PG+ ++ A GS D+ ++VWD TG L +L S TGH SV + +
Sbjct: 529 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 588
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ S DR+VK W+L+ DS++ NSG+ +T K L
Sbjct: 589 QSVVSGSLDRSVKLWNLQNAN-----NKSDSKT-------PNSGTCEVTYIGHKDFVL-- 634
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA------LHPTLYMF 387
+ T+ +++GS D + WD +G L L H+ SV SVA L P +F
Sbjct: 635 -SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVF 693
Query: 388 ASASPD-NIKQWK 399
A+ S D + WK
Sbjct: 694 ATGSGDCKARIWK 706
Score = 95 (38.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 31/87 (35%), Positives = 43/87 (49%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV---SPRH 273
GH +V VA +E+ +GS D+ + WD +G L L GH SV + V SP
Sbjct: 628 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLG 687
Query: 274 P-Y-LFSCGD-DRTVKCWDLEYNK-AP 296
P Y +F+ G D + W +Y K AP
Sbjct: 688 PEYNVFATGSGDCKARIW--KYKKIAP 712
Score = 93 (37.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 4 LATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVR 63
LATG + + + ++ GH + ++ P+ D L++ D T R+WD+R
Sbjct: 458 LATGAEDRLI--RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 515
Query: 64 TKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGT-AGFLLSCLPSLLD 122
T TL+ V T A P G K + S +R + V + GFL+ L S +
Sbjct: 516 TGQCSLTLSIEDG----VTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENE 570
Query: 123 FGT 125
GT
Sbjct: 571 SGT 573
Score = 66 (28.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 36 VNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ ++ P L T D R+WD+ + V L GH I S+
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 491
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 144 (55.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 37/129 (28%), Positives = 63/129 (48%)
Query: 224 CVAVEPGNEWFATGSADKI-IKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDD 282
CVAV+ E + G+ D I VW + TG+L L+GH G + GL +P L S D
Sbjct: 465 CVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWD 524
Query: 283 RTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEES 342
+TV+ WD+ + + S+ S+ + ++T+ G+ L + + + +++ S
Sbjct: 525 KTVRLWDMFDSWRTKETLSLTSD--VLAVTYRPDGAELAVATLNSQITFWDPENAVQVGS 582
Query: 343 HPVITGSHD 351
I G HD
Sbjct: 583 ---IEGRHD 588
Score = 126 (49.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 34/112 (30%), Positives = 51/112 (45%)
Query: 222 VRCVAVEPGNEWFATG-SADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
V VA+ +W A G S + VW+ + L GH S+ L SP Y+ + G
Sbjct: 335 VASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 394
Query: 281 DDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLY 332
DD VK W+ V + SG+ +TF +G ++T+ D TV+ Y
Sbjct: 395 DDGKVKVWNTLSGFCFVT--LTEHSSGVTGVTFTATGHVIVTSSLDGTVRAY 444
Score = 115 (45.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS-VALHPTLYMFASASPDNIK- 396
T H ++T S D T+R +DL ++ T T+ + + S VA+ + + ++ + D+ +
Sbjct: 426 TATGHVIVTSSLDGTVRAYDLHRYRNFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEI 485
Query: 397 -QWKCPEGKFIQNLPGHNAIINSICVNN-EGVLVSGADNGTMCFWD----WRT 443
W G+ + L GH I+ +C N + +L S + + T+ WD WRT
Sbjct: 486 FVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTVRLWDMFDSWRT 538
Score = 102 (41.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
GH + +A P ++ TG D +KVW+ +G ++LT H V G+T + +
Sbjct: 373 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTATGHVI 432
Query: 277 FSCGDDRTVKCWDL 290
+ D TV+ +DL
Sbjct: 433 VTSSLDGTVRAYDL 446
Score = 76 (31.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH +S+ ++ P ++T G D +VW+ + TLT H++ + V A+ +
Sbjct: 373 GHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTATGHVI 432
Query: 91 GTKTV 95
T ++
Sbjct: 433 VTSSL 437
Score = 76 (31.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 338 ATEESHPVIT-GSHDC-TIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN- 394
A + S +++ G+ D I +W + G+ L L+ H+ + + +P + ASAS D
Sbjct: 467 AVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKT 526
Query: 395 IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGAD-NGTMCFWD 440
++ W + + + + ++ +G ++ A N + FWD
Sbjct: 527 VRLWDMFDSWRTKETLSLTSDVLAVTYRPDGAELAVATLNSQITFWD 573
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 171 (65.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 43/132 (32%), Positives = 62/132 (46%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEP-GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
W W + + GH +V +A+ P N FAT S DK +KVW + +L GH
Sbjct: 128 WDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKG 187
Query: 264 VRGLTV--SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSES-GIFSMTFDNSGSRL 320
V + PY+ S DD VK WD + NK VQ ++D + + S+ F +
Sbjct: 188 VNCVDYYHGGEKPYIISGADDHLVKIWDYQ-NKTCVQ--TLDGHAQNVSSVCFHPELPLI 244
Query: 321 ITTEADKTVKLY 332
IT D TV+L+
Sbjct: 245 ITGSEDSTVRLW 256
Score = 126 (49.4 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 33/113 (29%), Positives = 49/113 (43%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
VR P W TGS D I+V++ T + H +R L V P PY+ S D
Sbjct: 60 VRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSD 119
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFD-NSGSRLITTEADKTVKLYK 333
D VK WD + NK ++ + + + + T DKTVK+++
Sbjct: 120 DMLVKMWDWD-NKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQ 171
Score = 114 (45.2 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 26/108 (24%), Positives = 52/108 (48%)
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH---PTLYMFASASPDNIK 396
++++ T S D T+++W + TL H+K V V + Y+ + A +K
Sbjct: 153 KDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVK 212
Query: 397 QWKCPEGKFIQNLPGHNAIINSICVNNE-GVLVSGADNGTMCFWDWRT 443
W +Q L GH ++S+C + E ++++G+++ T+ W T
Sbjct: 213 IWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANT 260
Score = 75 (31.5 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK-ANVYTLTGHTNTIASV 81
+ + H + ++ +HPT+ +I++ D ++WD K A + GHT+ + +
Sbjct: 92 VHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQI 148
Score = 64 (27.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/123 (21%), Positives = 52/123 (42%)
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
V+CV + P W + + +W+ T L S VR PR ++ + D
Sbjct: 18 VKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVTGSD 77
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIF-SMTFDNSGSRLITTEADKTVKLYKEDDS-AT 339
D ++ ++ YN + ++ S S+ + +I++ D VK++ D+ A
Sbjct: 78 DMHIRVFN--YNTLE-RVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAM 134
Query: 340 EES 342
++S
Sbjct: 135 KQS 137
Score = 45 (20.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANV 68
L V R V + LHP L+ A + +W+ T+ V
Sbjct: 5 LDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLV 50
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 146 (56.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 56/231 (24%), Positives = 101/231 (43%)
Query: 229 PGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKC 287
P + S +KV++L T ++ L GH V L V R +LF SC D++V+
Sbjct: 253 PEDSHVVVASNSPCLKVFELQTSACQI-LHGHTDIVLALDVF-RKGWLFASCAKDQSVRI 310
Query: 288 WDLE------YNKAPVQPGSMDSESGIFSM--------TFDNSGSRLITTEADKTVKLYK 333
W + ++ + GS D ++ + T ++G L+ +A T + +
Sbjct: 311 WRMNKAGQVMLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILL--QAQTTQRCHD 368
Query: 334 EDDSATE---ESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASA 390
+D ++ + TGS D T +LW L + L + H++ + V P + A+A
Sbjct: 369 KDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATA 428
Query: 391 SPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFW 439
S D IK W + ++ GH+A + + + G L+S +G + W
Sbjct: 429 SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLW 479
Score = 138 (53.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 156 RSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVI 215
++ +R HD I+ + P+ ++L+ T + + + AK ALP +L V
Sbjct: 361 QTTQRCHDKDINSVAIAPN--DKLLATGSQD----RTAKLWALPQ--------CQLLGVF 406
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
SGH + CV P ++ AT SAD IK+W L + GH SV + R
Sbjct: 407 SGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQ 466
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDS-ESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
L S G D VK W ++ N+ V+ ++D+ E ++ + +T +D V L+K+
Sbjct: 467 LLSSGSDGLVKLWTIKNNEC-VR--TLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKD 523
Query: 335 DDSATE 340
A +
Sbjct: 524 VTEAEQ 529
Score = 92 (37.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 31/138 (22%), Positives = 54/138 (39%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
+L++ I H V +A +P + ATG D ++VWD+ G G V +
Sbjct: 10 RLWKAI--HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAF 67
Query: 270 --SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADK 327
P LFS D ++ W L+ + S + S+ F G ++++ DK
Sbjct: 68 HPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTA--HYSAVTSLAFSADGHTMLSSGRDK 125
Query: 328 TVKLYKEDDSATEESHPV 345
++ + PV
Sbjct: 126 ICIIWDLQSCQATRTVPV 143
Score = 90 (36.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 11 LSLTGHVGSVRGLTVIRHY---H--GHLSSVNTISLHP--TIDVLITAGRDSTARVWDVR 63
L+ G G+VR ++RHY H G V+ ++ HP T +L ++ D+ RVW ++
Sbjct: 32 LATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQ 91
Query: 64 TKANVYTLTGHTNTIASVVTQA 85
++ + LT H + + S+ A
Sbjct: 92 DRSCLAVLTAHYSAVTSLAFSA 113
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 347 TGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA-LHPTLYMFASASPDNIKQWKCPEGKF 405
T S D TI+LW L L T H SV VA + + +S S +K W +
Sbjct: 427 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNEC 486
Query: 406 IQNLPGH 412
++ L H
Sbjct: 487 VRTLDAH 493
Score = 71 (30.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
H + V T++ PT +L T G D RVWD+
Sbjct: 16 HTAPVATMAFDPTSTLLATGGCDGAVRVWDI 46
Score = 67 (28.6 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 28/134 (20%), Positives = 50/134 (37%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
V++ H V +A + DKI +WDL + + ++ SV + P
Sbjct: 98 VLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFE-SVEAAVLLPEE 156
Query: 274 P-----------YLFSCGDDRTVKCWDLEYNKA---PVQPGSMDSESGIFSMTFDNSGSR 319
P Y + GD T++ W+ + QP E + T ++
Sbjct: 157 PVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQE--LTHCTLAHTAGV 214
Query: 320 LITTEADKTVKLYK 333
++T AD + LY+
Sbjct: 215 VLTATADHNLLLYE 228
Score = 62 (26.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 32 HLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEP--Q 89
H S+V +++ ++++GRD +WD+++ T+ + A+V+ EP Q
Sbjct: 102 HYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLP-EEPVSQ 160
Query: 90 VGTKT 94
+G K+
Sbjct: 161 LGVKS 165
Score = 51 (23.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 49 ITAGRDSTARVWDVRTKANVYT 70
+TAG T RVW+ + VYT
Sbjct: 171 LTAGDQGTLRVWEAASGQCVYT 192
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 30 HGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANV 68
HGH V + + + + +D + R+W + V
Sbjct: 281 HGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQV 319
Score = 39 (18.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 48 LITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQ 89
L+T +D T ++W + KA + T N ++ QA Q
Sbjct: 326 LVTGSQDCTVKLWPL-PKALLSKNTAPDN--GPILLQAQTTQ 364
WARNING: HSPs involving 1021 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 479 479 0.00079 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1271
No. of states in DFA: 620 (66 KB)
Total size of DFA: 322 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.33u 0.10s 42.43t Elapsed: 00:00:16
Total cpu time: 42.53u 0.11s 42.64t Elapsed: 00:00:16
Start: Thu Aug 15 12:35:35 2013 End: Thu Aug 15 12:35:51 2013
WARNINGS ISSUED: 2