RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8895
(479 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 114 bits (286), Expect = 3e-29
Identities = 59/310 (19%), Positives = 114/310 (36%), Gaps = 4/310 (1%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
GH S V + HP V+++A D+T +VWD T TL GHT+++ +
Sbjct: 10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69
Query: 86 SEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIR--PWQLQIIQEQCFLNLQ 143
S + + + + + ++ + + +++ +
Sbjct: 70 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 144 EVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKP 203
+ V T L+ S N +A+ +
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 204 QWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
+ + +GS DK IK+WD++TG ++L GH
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
VRG+ ++ SC DD+T++ WD + NK ++ + E + S+ F + ++T
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYK-NKRCMKTLN-AHEHFVTSLDFHKTAPYVVTG 307
Query: 324 EADKTVKLYK 333
D+TVK+++
Sbjct: 308 SVDQTVKVWE 317
Score = 114 bits (285), Expect = 4e-29
Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 41/286 (14%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
W +SGH V V P + S D IKVWD TG + +L GH SV
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV 62
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
+ ++ L SC D T+K WD + + D S+ + G +++
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN--GDHIVSAS 120
Query: 325 ADKTVKLYKEDD-----------------SATEESHPVITGSHDCTIRLWDLAAGKSLCT 367
DKT+K+++ ++ + + S+D T+R+W +A +
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
Query: 368 LTNHKKSVRSVALH--------------------PTLYMFASASPDN-IKQWKCPEGKFI 406
L H+ V ++ S S D IK W G +
Sbjct: 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 240
Query: 407 QNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
L GH+ + + ++ G ++S AD+ T+ WD++ + L
Sbjct: 241 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286
Score = 108 bits (269), Expect = 7e-27
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 199 PMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
K ++ R + GH V V++ P + + S DK IK+W++ TG + T
Sbjct: 81 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 140
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
GH VR + + + SC +D+TV+ W + + + + + +++ S
Sbjct: 141 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE--LREHRHVVECISWAPESS 198
Query: 319 RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
+EA + +++GS D TI++WD++ G L TL H VR V
Sbjct: 199 YSSISEATGSETKKSGKPG-----PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253
Query: 379 ALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTM 436
H S + D ++ W + ++ L H + S+ + +V+G+ + T+
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 437 CFWD 440
W+
Sbjct: 314 KVWE 317
Score = 95.6 bits (236), Expect = 2e-22
Identities = 63/315 (20%), Positives = 109/315 (34%), Gaps = 66/315 (20%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLT--------------------------VIRHYHGHLS 34
VWD TG + +L GH SV+ ++ IR HGH
Sbjct: 43 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 102
Query: 35 SVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKT 94
+V+++S+ P D +++A RD T ++W+V+T V T TGH + V + + +
Sbjct: 103 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 162
Query: 95 VLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLV 154
+ T+R W + + + L +
Sbjct: 163 ---------------------------NDQTVRVWVVATKECKAELREHRHVVECISWAP 195
Query: 155 FRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRV 214
S + S + L+ + T + +
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW-------------DVSTGMCLMT 242
Query: 215 ISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHP 274
+ GH WVR V G ++ + + DK ++VWD + +L H V L P
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 302
Query: 275 YLFSCGDDRTVKCWD 289
Y+ + D+TVK W+
Sbjct: 303 YVVTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 105 bits (262), Expect = 9e-26
Identities = 47/296 (15%), Positives = 96/296 (32%), Gaps = 27/296 (9%)
Query: 188 QIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWD 247
++ P + R + GHL + + + + S D + +WD
Sbjct: 24 ACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Query: 248 LATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE-YNKAPVQPGSMDSES 306
T ++ V +P Y+ G D ++L+ + +
Sbjct: 84 SYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT 143
Query: 307 GIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV-----------------ITGS 349
G S ++++T+ D T L+ + + ++G+
Sbjct: 144 GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 350 HDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWKCPEGKFI 406
D + +LWD+ G T T H+ + ++ P FA+ S D + + +
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT 263
Query: 407 QNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ-----VRCVS 456
+ I S+ + G +L++G D+ WD L V C+
Sbjct: 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Score = 103 bits (256), Expect = 6e-25
Identities = 40/198 (20%), Positives = 69/198 (34%), Gaps = 26/198 (13%)
Query: 202 KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHV 261
+ +GH G V +++ P F +G+ D K+WD+ G + + TGH
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
+ + P + DD T + +DL ++ + + GI S++F SG L
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL- 285
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
+ G D +WD L H V + +
Sbjct: 286 ------------------------LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 382 PTLYMFASASPDN-IKQW 398
A+ S D+ +K W
Sbjct: 322 DDGMAVATGSWDSFLKIW 339
Score = 86.3 bits (212), Expect = 3e-19
Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 23/314 (7%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
+ R GHL+ + + +L++A +D +WD T V+ + ++ + +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 83 TQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNL 142
S V ++ L T + L + Q +
Sbjct: 105 YAPSGNYVACGG---LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 143 QEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPK 202
+ + L + + +L + A +
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK------------ 209
Query: 203 PQWHAP-WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKV--WDLATGKLKLSLTG 259
W + +GH + + P FATGS D ++ + S
Sbjct: 210 -LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 260 HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESG-IFSMTFDNSGS 318
+ + ++ S L + DD WD + G + + + + G
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTDDGM 325
Query: 319 RLITTEADKTVKLY 332
+ T D +K++
Sbjct: 326 AVATGSWDSFLKIW 339
Score = 76.7 bits (187), Expect = 6e-16
Identities = 15/87 (17%), Positives = 24/87 (27%)
Query: 203 PQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
+ + + V+ G D VWD L GH
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWD 289
V L V+ + + D +K W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 55.9 bits (133), Expect = 3e-09
Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 28/109 (25%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV----------------------------IRHYHGH 32
+WD+ G + + TGH + + +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 33 LSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASV 81
+ + ++S + +L+ D VWD L GH N ++ +
Sbjct: 270 ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318
Score = 42.0 bits (97), Expect = 1e-04
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 16/61 (26%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWD L GH V + + + + T DS ++W
Sbjct: 296 VWDALKADRAGVLAGHDNRV----------------SCLGVTDDGMAVATGSWDSFLKIW 339
Query: 61 D 61
+
Sbjct: 340 N 340
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 99.5 bits (246), Expect = 1e-23
Identities = 66/398 (16%), Positives = 114/398 (28%), Gaps = 76/398 (19%)
Query: 2 WDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWD 61
W K L GH V L + +++ D+T +VW
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-----------------CLQFCGNRIVSGSDDNTLKVWS 43
Query: 62 VRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLL 121
T + TL GHT + S + + + G L S +
Sbjct: 44 AVTGKCLRTLVGHTGGVWSS---QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV 100
Query: 122 DFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVP 181
+ ++ L + +++ ++ + + + +V + +V
Sbjct: 101 RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV- 159
Query: 182 TTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADK 241
K + GH V + + +GS D
Sbjct: 160 --------------------KVWDPETETCLHTLQGHTNRVYSLQFDG--IHVVSGSLDT 197
Query: 242 IIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGS 301
I+VWD+ TG +LTGH G+ + L S D TVK WD++ +
Sbjct: 198 SIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQG 255
Query: 302 MDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAA 361
+ + N IT S D T++LWDL
Sbjct: 256 PNKHQSAVTCLQFNKNFV--------------------------ITSSDDGTVKLWDLKT 289
Query: 362 GKSLCTLTN-----HKKSVRSVALHPTLYMFASASPDN 394
G+ + L V + T + A S +
Sbjct: 290 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
Score = 93.7 bits (231), Expect = 1e-21
Identities = 59/258 (22%), Positives = 91/258 (35%), Gaps = 14/258 (5%)
Query: 207 APWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
K +V+ GH V ++ +GS D +KVW TGK +L GH G V
Sbjct: 4 GELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 62
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT---- 322
+ S V + + + SGSR T
Sbjct: 63 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 122
Query: 323 -----TEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
+ + V++G++D +++WD L TL H V S
Sbjct: 123 DIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 182
Query: 378 VALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTM 436
+ S S D I+ W G I L GH ++ + + + + +LVSG + T+
Sbjct: 183 LQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTV 239
Query: 437 CFWDWRTGYNFQRLQVRC 454
WD +TG Q LQ
Sbjct: 240 KIWDIKTGQCLQTLQGPN 257
Score = 54.8 bits (130), Expect = 8e-09
Identities = 42/303 (13%), Positives = 83/303 (27%), Gaps = 12/303 (3%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVN-TISLHPTIDVLITAGRDSTARV 59
VW TGK +L GH G V + + S+ + I T+ V
Sbjct: 41 VWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV 100
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPS 119
+ T+ + + + +
Sbjct: 101 RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 160
Query: 120 LLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQL 179
+ D T +LQ H V + S++ +C + ++
Sbjct: 161 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 220
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSA 239
+ ++ + + + + + + H V C+ + T S
Sbjct: 221 SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSD 278
Query: 240 DKIIKVWDLATGKLKLSLT-----GHVGSVRGLTVSPRHPYLFSCGDDRT----VKCWDL 290
D +K+WDL TG+ +L G G V + S + T + D
Sbjct: 279 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Query: 291 EYN 293
+ +
Sbjct: 339 DVD 341
Score = 47.1 bits (110), Expect = 2e-06
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 357 WDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAI 415
W KS L H V + L S S DN +K W GK ++ L GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 416 INSICVNNEGVLVSGADNGTMCFWDWRTGYNFQ 448
+ S + + ++ D +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT 92
Score = 39.0 bits (89), Expect = 0.001
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQ 451
W+ E K + L GH+ + + +VSG+D+ T+ W TG + L
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 92.6 bits (228), Expect = 5e-21
Identities = 67/388 (17%), Positives = 114/388 (29%), Gaps = 72/388 (18%)
Query: 26 IRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQA 85
+ H S V + + L T + T +V+ V + V L+ +
Sbjct: 55 LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN 113
Query: 86 SEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEV 145
+ + ++ S S + ++I+ N + V
Sbjct: 114 TSSSPSSD-----------------LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV 156
Query: 146 QRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQW 205
H SL +
Sbjct: 157 MILQGHEQDIYSLDYFPSGDKLVS-------------------------GSGDRTVRIWD 191
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-------T 258
+ +S G ++ A GS D+ ++VWD TG L L T
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
GH SV + + + S DR+VK W+L+ + +S + +
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311
Query: 319 RLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSV 378
+ T + +++GS D + WD +G L L H+ SV SV
Sbjct: 312 LSVATTQNDEY---------------ILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356
Query: 379 A------LHPTLYMFASASPDN-IKQWK 399
A L P +FA+ S D + WK
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 81.4 bits (199), Expect = 3e-17
Identities = 50/303 (16%), Positives = 90/303 (29%), Gaps = 15/303 (4%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIR--HYHGHLSSVNTISLHPTIDVLITAGRDSTAR 58
V+ ++ G L L+ + + + + ++ P L T D R
Sbjct: 87 VYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIR 146
Query: 59 VWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLP 118
+WD+ + V L GH I S+ S ++ + G LS
Sbjct: 147 IWDIENRKIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSLTLSIED 205
Query: 119 SLLDFGTIRPWQLQIIQ----EQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPS 174
+ I + E H + +V +
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS--VVFT 263
Query: 175 TENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWF 234
+ Q V + + + + A + GH +V VA +E+
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV------SPRHPYLFSCGDDRTVKCW 288
+GS D+ + WD +G L L GH SV + V P + + D + W
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Query: 289 DLE 291
+
Sbjct: 384 KYK 386
Score = 77.5 bits (189), Expect = 4e-16
Identities = 53/289 (18%), Positives = 87/289 (30%), Gaps = 55/289 (19%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTG----------------- 259
H V CV E+ ATG +K +V+ ++ G L L+
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 260 -HVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGS 318
+R + SP +L + +DR ++ WD+E K + + +
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 319 RL---------------ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGK 363
+ + + + GS D +R+WD G
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 364 SLCTL-------TNHKKSVRSVALHPTLYMFASASPDN-------------IKQWKCPEG 403
+ L T HK SV SV S S D G
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 404 KFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
GH + S+ ++SG+ + + FWD ++G LQ
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Score = 76.4 bits (186), Expect = 1e-15
Identities = 58/284 (20%), Positives = 96/284 (33%), Gaps = 46/284 (16%)
Query: 203 PQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
++R V P ++ ATG+ D++I++WD+ K+ + L GH
Sbjct: 105 ANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ 164
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLIT 322
+ L P L S DRTV+ WDL + + D G +
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV--TTVAVSPGDGKYIAA 222
Query: 323 TEADKTVKLYKEDDSATEESHP------------------------VITGSHDCTIRLWD 358
D+ V+++ + E V++GS D +++LW+
Sbjct: 223 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 282
Query: 359 LAAGKS------------LCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKF 405
L + T HK V SVA S S D + W G
Sbjct: 283 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 342
Query: 406 IQNLPGHNAIINSICVNN-------EGVLVSGADNGTMCFWDWR 442
+ L GH + S+ V N V +G+ + W ++
Sbjct: 343 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 42.9 bits (99), Expect = 5e-05
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 23/134 (17%)
Query: 344 PVITGSHDCTIRLWDLAAGK----SLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWK 399
+ + L++ A + L +H V V A+ + ++
Sbjct: 30 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYR 89
Query: 400 CPEGKFIQNL------------------PGHNAIINSICVNNEGVL-VSGADNGTMCFWD 440
+G + L P + I S+C + +G +GA++ + WD
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149
Query: 441 WRTGYNFQRLQVRC 454
LQ
Sbjct: 150 IENRKIVMILQGHE 163
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 83.8 bits (205), Expect = 4e-18
Identities = 55/430 (12%), Positives = 124/430 (28%), Gaps = 73/430 (16%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRT------KANVYTLTGHTNTIASVVTQ 84
H + + ++S ++ D +VWD + K Y+ H + + V
Sbjct: 12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 85 ASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQE 144
+ + + L+ + G + +++ E ++
Sbjct: 70 QAIERDAFELCLVATTS--------------------FSGDLLFYRITREDE-----TKK 104
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQ 204
V + L K + ++LV T T I + A
Sbjct: 105 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164
Query: 205 WHAPWKLY-----RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWD------LATGKL 253
+ L + V + ATG + +++ + L +
Sbjct: 165 LNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLYNFES 223
Query: 254 KLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTF 313
+ S+ + S+R + SP+ L D + C ++E G +
Sbjct: 224 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT-----------LYETEFGERIGSL 272
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+ + + S + + + D +R WD+ + + TL H
Sbjct: 273 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD 332
Query: 374 SVR----SVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
+ +A+ A ++K K K ++ G + NE +
Sbjct: 333 DIEIEEDILAVDEHGDSLAEPGVFDVKFLK----KGWRSGMGAD--------LNESLCCV 380
Query: 430 GADNGTMCFW 439
D ++ ++
Sbjct: 381 CLDR-SIRWF 389
Score = 69.1 bits (167), Expect = 3e-13
Identities = 27/267 (10%), Positives = 64/267 (23%), Gaps = 50/267 (18%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLK------LSLTGHVGSVRGL 267
H + V+ + + S D +KVWD + S H + +
Sbjct: 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 268 TV-------SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRL 320
V + + + + + + E + F+
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRIT------------REDETKKVIFEKLDLLD 114
Query: 321 ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
+ L + SH ++ T +W S
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS------ 168
Query: 381 HPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+++ + S+ ++ G++ +G +NGT+ +
Sbjct: 169 -----------------PTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISE 211
Query: 441 WRTGYNFQRLQVRCVSGFPKPSVFFFF 467
T + + S+
Sbjct: 212 LSTLRPLYNFESQHSMINNSNSIRSVK 238
Score = 67.2 bits (162), Expect = 1e-12
Identities = 45/381 (11%), Positives = 85/381 (22%), Gaps = 47/381 (12%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
VWD + S H + ++ T +
Sbjct: 38 VWDNKLLDNENPK---DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 94
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
+ + + + + + V
Sbjct: 95 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK--------- 145
Query: 121 LDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLV 180
GT W+ ++ S T F + V +E L+
Sbjct: 146 ---GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP-MTPSQFATS---VDISERGLI 198
Query: 181 PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSAD 240
T +N + + + + ++ + + +R V P A
Sbjct: 199 ATGFNNGTV------QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252
Query: 241 KIIKVW----------------DLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRT 284
+ + L H V L+ + L S G D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 312
Query: 285 VKCWDLEYNKAPVQ--PGSMDS-ESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEE 341
++ WD++ K + D E + D G L L K S
Sbjct: 313 LRFWDVK-TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 371
Query: 342 SHP--VITGSHDCTIRLWDLA 360
+ D +IR + A
Sbjct: 372 DLNESLCCVCLDRSIRWFREA 392
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 81.6 bits (199), Expect = 8e-18
Identities = 39/297 (13%), Positives = 81/297 (27%), Gaps = 28/297 (9%)
Query: 24 TVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT-GHTNTIASV- 81
++ + +GH ++ +S L +A + WD+ T + H I +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 82 ---------------VTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTI 126
+ G + + + LG A + + I
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 127 RPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASN 186
+ + E S + + + +E + + A
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 187 TQIIQQAKAKALPMP---------KPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATG 237
T + L + + H V CV+ P N ATG
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG 242
Query: 238 SADKIIKVWDLATGKLKLSLTGHVGSVRGLTV--SPRHPYLFSCGDDRTVKCWDLEY 292
S D + VW++ + ++ + + S G D +K W++ +
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVPF 299
Score = 63.5 bits (152), Expect = 1e-11
Identities = 30/276 (10%), Positives = 66/276 (23%), Gaps = 21/276 (7%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT-GHVGSVRGLT 268
+ +V GH + ++ + + A+ I WD++TG H + G+
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
LF+ D +K + + S ++ + K
Sbjct: 63 T-TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 329 VKLYKEDDSATEESHPVIT--------------GSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ +Y + G A S H
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 375 VRSVALHPTLYMFASASPDNIKQ-----WKCPEGKFIQNLPGHNAIINSICVNNEGVLVS 429
+ SVA + + + L +
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 430 GADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFF 465
G+ + ++ W+ + + + SV +
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW 277
Score = 44.6 bits (103), Expect = 1e-05
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 251 GKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
G + GH ++ L+ S LFS + + WD+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 42
Score = 40.0 bits (91), Expect = 4e-04
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 343 HPVITGSHDCTIRLWDLAAGKSLCTLTN--HKKSVRSVALHPTLYMFASASPDN-IKQWK 399
+ TGS D ++ +W++ + H S + + SA D+ IK W
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Query: 400 CP 401
P
Sbjct: 297 VP 298
Score = 37.3 bits (84), Expect = 0.003
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 381 HPTLYMFASASPDN-IKQWKCPEGKFIQNL---PGHNAIINSICVNNEGVLVSGADNGTM 436
P A+ S DN + W + + + +NS+ NE +VS + +
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNI 292
Query: 437 CFWD 440
FW+
Sbjct: 293 KFWN 296
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 81.8 bits (200), Expect = 1e-17
Identities = 30/271 (11%), Positives = 68/271 (25%), Gaps = 42/271 (15%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL--SLTGHVGSVRGLTVSPRH 273
S + + C A A + + +++ + K L H G V G+ +P
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ +CG DR W L+ + + + + + + + +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 334 EDDSATEESHPVI---------------------TGSHDCTIRLWDLAAGKSL------- 365
+ I GS D R++ +
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183
Query: 366 -----------CTLTNHKKSVRSVALHPTLYMFASAS-PDNIKQWKCPEGKFIQNLPGHN 413
++ V V A S + + + L
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 414 AIINSICVNNEGVLVSGADNGTMCFWDWRTG 444
+ ++ E LV+ + + + +
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVLFTYDSA 274
Score = 70.3 bits (170), Expect = 8e-14
Identities = 41/424 (9%), Positives = 96/424 (22%), Gaps = 71/424 (16%)
Query: 28 HYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTK--ANVYTLTGHTNTIASVVTQA 85
++ + ++ + + + + +++ V+ L H + V
Sbjct: 2 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61
Query: 86 SEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEV 145
+++C W L+ + L + +
Sbjct: 62 DS-----------------------NRIVTCG----TDRNAYVWTLKGRTWKPTLVILRI 94
Query: 146 QRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQW 205
R + + K+ S + ++ + + K
Sbjct: 95 NRAARCVRWAPNEKKFAVGSGSRVISICYF------EQENDWWVCKHIKKPIRSTVLSLD 148
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
P + R + + G+L + G V
Sbjct: 149 WHPNSVLLAAGSCDFKCRIFSAYIKE---VEERPAPTPWGSKMPFGELMFESSSSCGWVH 205
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
G+ S + D TV D + A S + ++S
Sbjct: 206 GVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS--------- 256
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
++ HDC L+ + + + +
Sbjct: 257 -------------------LVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 297
Query: 386 MFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-----VLVSGADNGTMCFWD 440
+ D + H ++ I V + G + +G M WD
Sbjct: 298 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
Query: 441 WRTG 444
R+
Sbjct: 358 VRSL 361
Score = 57.6 bits (137), Expect = 1e-09
Identities = 36/378 (9%), Positives = 93/378 (24%), Gaps = 47/378 (12%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+++ + K + H V + P + ++T G D A VW
Sbjct: 33 IYEKSGNKWVQ--------------VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 78
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
++ + TL A+ + + + I + + +
Sbjct: 79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 138
Query: 121 LDFGTIR----PWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTE 176
T+ ++ + + + R + EL+ +
Sbjct: 139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 198
Query: 177 NQLVPTTA-SNTQIIQQAKAKALPMPKPQWHA-PWKLYRVISGHLGWVRCVAVEPGNEWF 234
+ + + + A ++ + V +
Sbjct: 199 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLV 258
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNK 294
A G ++ + KLS G + + + D+
Sbjct: 259 AAGHDCF-PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 317
Query: 295 APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTI 354
A + ++ + ++ + G + T D +
Sbjct: 318 AGLDSL---HKNSVSQISVLSGGKAKCSQ---------------------FCTTGMDGGM 353
Query: 355 RLWDLAAGKSLCTLTNHK 372
+WD+ + +S L + K
Sbjct: 354 SIWDVRSLES--ALKDLK 369
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 80.6 bits (197), Expect = 2e-17
Identities = 31/294 (10%), Positives = 70/294 (23%), Gaps = 31/294 (10%)
Query: 28 HYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLT-----GHTNTIASVV 82
+ H V +++ + T G +VWD+ N ++ N I S
Sbjct: 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104
Query: 83 TQASEPQV------GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQE 136
+ T ++ + +C + + +
Sbjct: 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164
Query: 137 QCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAK 196
+L + +N + + +QQ
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224
Query: 197 A------------------LPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGS 238
+ H + H V + +WF +
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG 284
Query: 239 ADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEY 292
D ++ W G + + SV +S Y+ + D+ +++ Y
Sbjct: 285 KDNLLNAWRTPYGAS-IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337
Score = 66.4 bits (160), Expect = 1e-12
Identities = 40/303 (13%), Positives = 82/303 (27%), Gaps = 29/303 (9%)
Query: 176 ENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPW-----KLYRVISGHLGWVRCVAVEPG 230
+ + A + + + + +P P P + + H V V +
Sbjct: 4 QGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNP 62
Query: 231 NEWFATGSADKIIKVWDLATGKLK-----LSLTGHVGSVRGLTVSPRHPYLFSCGDDRTV 285
TG +KVWD++ K L +R + P L G+ T+
Sbjct: 63 TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121
Query: 286 KCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
WDL ++ S +++ + +D + ++ +
Sbjct: 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181
Query: 346 ITGSHDCTIRLWDLAAGKS----------------LCTLTNHKKSVRSVALHPTLYMFAS 389
T C D + + + S+ PT A
Sbjct: 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV 241
Query: 390 ASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQ 448
+ + L H + + S+ G VS + + W G +
Sbjct: 242 GMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301
Query: 449 RLQ 451
+ +
Sbjct: 302 QSK 304
Score = 56.7 bits (135), Expect = 2e-09
Identities = 31/242 (12%), Positives = 70/242 (28%), Gaps = 18/242 (7%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
++R + P G + +WDLA ++ + ++
Sbjct: 94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS 153
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
+ + + G + N G++L T D TV+ +
Sbjct: 154 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR 213
Query: 336 DSATEESH---------------PVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVAL 380
+ + H + + + L H+ V S+
Sbjct: 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKF 273
Query: 381 HPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGADNGTMCF 438
F S DN + W+ P G I ++ + S ++ + +V+G+ +
Sbjct: 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATV 332
Query: 439 WD 440
++
Sbjct: 333 YE 334
Score = 38.3 bits (87), Expect = 0.002
Identities = 10/62 (16%), Positives = 16/62 (25%), Gaps = 17/62 (27%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
W G SSV + + ++T D A V+
Sbjct: 291 AWRTPYGASIFQS-----------------KESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Query: 61 DV 62
+V
Sbjct: 334 EV 335
Score = 35.9 bits (81), Expect = 0.008
Identities = 12/115 (10%), Positives = 28/115 (24%), Gaps = 6/115 (5%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLT-----NHKKSVRSVALHPTLYMFASASPDNIKQWK 399
V TG +++WD++ + ++ N +RS L P +
Sbjct: 66 VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
+ + + + + Q L +
Sbjct: 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179
Score = 35.9 bits (81), Expect = 0.009
Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 1/90 (1%)
Query: 369 TNHKKSVRSVALHPTLYMFA-SASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVL 427
K S + M PD + P N H ++ ++ ++N
Sbjct: 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRH 65
Query: 428 VSGADNGTMCFWDWRTGYNFQRLQVRCVSG 457
V G + WD N +
Sbjct: 66 VYTGGKGCVKVWDISHPGNKSPVSQLDCLN 95
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 79.9 bits (195), Expect = 6e-17
Identities = 41/345 (11%), Positives = 98/345 (28%), Gaps = 33/345 (9%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTL---TGHTNTIA 79
+ +++ ++ I + P+ +L+ D + V+ +A L + + +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 80 SVVTQASEPQV---GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQE 136
+ GT + + I A + +L
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 137 QCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAK 196
+ + + + + + ++L + + + + ++L+ ++ +
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180
Query: 197 ALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLS 256
+ + E +A S D + V +
Sbjct: 181 EDDNGTIEESGLKY---------QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231
Query: 257 L---------------TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGS 301
T V + SPRH +L++ G D + CW+L+ K
Sbjct: 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291
Query: 302 MDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
+ +S + S + L +D T K D E + I
Sbjct: 292 FNEDS---VVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSI 333
Score = 64.9 bits (156), Expect = 4e-12
Identities = 24/282 (8%), Positives = 65/282 (23%), Gaps = 47/282 (16%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL---TGHVGSVRG 266
++ ++ ++ + + P S D + V+ + L + +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 267 LTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEAD 326
G + Q + + + +LI D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 327 KTVKLYKEDDSATEESHPVITGSH-----------------------DCTIRLWDLAAGK 363
+++ + S+ + ++ + L +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 364 SL----CTLTNHKKSVRSVALHPTLYMFASASPDN----------------IKQWKCPEG 403
+ L +A +S D K++
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 404 KFIQNLPGHNAIINSICVN-NEGVLVSGADNGTMCFWDWRTG 444
+ +NSI + L + +G + W+ +T
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283
Score = 49.8 bits (117), Expect = 3e-07
Identities = 20/226 (8%), Positives = 49/226 (21%), Gaps = 22/226 (9%)
Query: 199 PMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
+ + ++ + G + ++ + L +
Sbjct: 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187
Query: 259 GHVGS----VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFD 314
G + D V D + ++ +
Sbjct: 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF------------DDQGDDYNSSKR 235
Query: 315 NSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKS 374
+ D + + + T D I W+L K +
Sbjct: 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NE 294
Query: 375 VRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSI 419
V + + + A+ D+ K Q + + + I I
Sbjct: 295 DSVVKIACSDNILCLATSDDTFKTN----AAIDQTIELNASSIYII 336
Score = 44.8 bits (104), Expect = 1e-05
Identities = 31/276 (11%), Positives = 72/276 (26%), Gaps = 20/276 (7%)
Query: 162 HDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGW 221
+ + C + +T+ Q+ T + A + R+
Sbjct: 55 YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK 114
Query: 222 VRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGD 281
+ + + E + + L+ + T+ L +
Sbjct: 115 LIAASWDGLIEVIDPRNYGDGVIAVK------NLNSNNTKVKNKIFTMDTNSSRLIVGMN 168
Query: 282 DRTVKCWDLEYNKAPVQPGSMDSESGIFSMT--FDNSGSRLITTEADKTVKLYKEDDSAT 339
+ V+ + L + + D V + DD
Sbjct: 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQW 398
+ + + + + + TN V S+ P +A D I W
Sbjct: 229 DYN----------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278
Query: 399 KCPEGKFIQNLPGHNAI-INSICVNNEGVLVSGADN 433
K I+N N + I ++ + ++ +D+
Sbjct: 279 NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDD 314
Score = 41.4 bits (95), Expect = 1e-04
Identities = 13/117 (11%), Positives = 30/117 (25%), Gaps = 7/117 (5%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTN---HKKSVRSVALHPT----LYMFASASPDNIKQ 397
++ S D ++ ++ L +K + +Y+
Sbjct: 26 LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85
Query: 398 WKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
N I IC + L++ + +G + D R +
Sbjct: 86 LIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142
Score = 38.7 bits (88), Expect = 0.001
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Query: 371 HKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNL---PGHNAIINSICV--NNE 424
K + + + P+ + S D + +K +L + + N +
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69
Query: 425 GVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
+ G G + D +FQ L
Sbjct: 70 LQIYVGTVQGEILKVDLIGSPSFQALTNNE 99
Score = 32.5 bits (72), Expect = 0.11
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 406 IQNLPGHNAIINSICVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVF 464
+Q I+ I + +L+ + +G++ + + L P
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 465 F 465
F
Sbjct: 64 F 64
Score = 32.1 bits (71), Expect = 0.15
Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 21/81 (25%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
W+L T K + + + + + + ++L A D T +
Sbjct: 277 CWNLQTRKKIKNFAKF-----------------NEDSVVKIACSDNILCLATSDDTFKTN 319
Query: 61 DVRTKANVYTLTGHTNTIASV 81
+ T+ + ++I +
Sbjct: 320 AAIDQ----TIELNASSIYII 336
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 78.0 bits (190), Expect = 1e-16
Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 18/246 (7%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPY 275
S V C+ ++ +G D IK+WD T + K LTGH GSV L R
Sbjct: 12 SETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII 69
Query: 276 LFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKED 335
S V + + F+ + S+ +
Sbjct: 70 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129
Query: 336 DSATEESHP------------VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPT 383
H +++ S D TI++W+ + + + TL HK+ + +
Sbjct: 130 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD- 188
Query: 384 LYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWR 442
+ S S DN I+ W G ++ L GH + + +VSGA +G + WD
Sbjct: 189 -RLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFDNKRIVSGAYDGKIKVWDLV 246
Query: 443 TGYNFQ 448
+ +
Sbjct: 247 AALDPR 252
Score = 71.0 bits (172), Expect = 3e-14
Identities = 45/293 (15%), Positives = 87/293 (29%), Gaps = 30/293 (10%)
Query: 23 LTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
L I V + +++ RD+T ++WD T LTGHT ++ +
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 83 -----------TQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQL 131
+L + + F + + +I W +
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 132 QIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQ 191
+ + R +V+ + F ++ ++ + V T + + I
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182
Query: 192 QAKAKALPMPKPQWHAPWKLYRVISGHL------GWVRCVAVEPGNEWFATGSADKIIKV 245
+ + + +L+ + G + N+ +G+ D IKV
Sbjct: 183 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 242
Query: 246 WDLATGKLKL---------SLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
WDL +L H G V L + S D T+ WD
Sbjct: 243 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF--QIVSSSHDDTILIWD 293
Score = 56.8 bits (135), Expect = 2e-09
Identities = 37/204 (18%), Positives = 65/204 (31%), Gaps = 43/204 (21%)
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
+P + V+ +++ + S D+ IKVW+ +T + +L GH +
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 265 RGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTE 324
L R + S D T++ WD+E +
Sbjct: 182 ACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--------- 230
Query: 325 ADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKS---------LCTLTNHKKSV 375
+++G++D I++WDL A L TL H V
Sbjct: 231 --------------------IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270
Query: 376 RSVALHPTLYMFASASPDN-IKQW 398
+ S+S D+ I W
Sbjct: 271 FRLQFDEF--QIVSSSHDDTILIW 292
Score = 42.5 bits (98), Expect = 6e-05
Identities = 37/265 (13%), Positives = 66/265 (24%), Gaps = 28/265 (10%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+WD T + K LTGH GSV + Y + + + + T +T
Sbjct: 39 IWDKNTLECKRILTGHTGSV----LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHH 94
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
+ + T L + F + S
Sbjct: 95 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA 154
Query: 121 LDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHT------------------LVFRSLKRTH 162
TI+ W + LN + + + + R
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL 214
Query: 163 DMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWV 222
+ + ++V + A P+ A R + H G V
Sbjct: 215 EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAAL----DPRAPAGTLCLRTLVEHSGRV 270
Query: 223 RCVAVEPGNEWFATGSADKIIKVWD 247
+ + + S D I +WD
Sbjct: 271 FRLQFDEF--QIVSSSHDDTILIWD 293
Score = 34.4 bits (77), Expect = 0.020
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 3/93 (3%)
Query: 363 KSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSICV 421
+ + + K V + S DN IK W + + L GH + +
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 422 NNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
+ ++ +D+ + +
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 96
Score = 29.4 bits (64), Expect = 0.99
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 406 IQNLPGHNAIINSI-CVNNEG-VLVSGADNGTMCFWDWRTGYNFQRLQ 451
+Q + + + C+ + +VSG + T+ WD T + L
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 52
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 73.8 bits (179), Expect = 3e-15
Identities = 37/291 (12%), Positives = 80/291 (27%), Gaps = 36/291 (12%)
Query: 25 VIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQ 84
V++ GH + ++++P LI+ D W + H+N I S+
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNS 55
Query: 85 ASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQE 144
++ I + ++ + + +I + ++ +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQEL-------------------------VPSTENQL 179
R + + + + + + ++
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSA 239
I ++ + +W IS E + ATGS
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 235
Query: 240 DKIIKVWDLAT-GKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWD 289
D I ++ + K+ +L H V L L S G D +K W+
Sbjct: 236 DTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN 285
Score = 61.1 bits (146), Expect = 6e-11
Identities = 26/253 (10%), Positives = 67/253 (26%), Gaps = 27/253 (10%)
Query: 210 KLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
++ + ISGH + + V P +GS D I W ++ H + L
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDN 54
Query: 270 SPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTV 329
S Y DD ++ + + G ++ ++ ++ + +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 330 KLYKEDDSATEESHPVITGSHDCT------------------IRLWDLAAGKSLCTLTNH 371
K + + + S + ++ A + +
Sbjct: 115 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 174
Query: 372 KKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGA 431
+ L + +W K + E ++ +G+
Sbjct: 175 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS 234
Query: 432 DNGTMCFWDWRTG 444
+ + + +
Sbjct: 235 LDTNIFIYSVKRP 247
Score = 44.2 bits (102), Expect = 2e-05
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 337 SATEESHPVITGSHDCTIRLWDLA-AGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI 395
E V TGS D I ++ + K + L HK V ++ + +S + I
Sbjct: 222 EEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACI 281
Query: 396 KQWK 399
K+W
Sbjct: 282 KRWN 285
Score = 40.7 bits (93), Expect = 2e-04
Identities = 20/250 (8%), Positives = 49/250 (19%), Gaps = 18/250 (7%)
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
W + H + + E+ + D + +
Sbjct: 36 WSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTA 95
Query: 269 VSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKT 328
V L + N + + + ++
Sbjct: 96 VLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF 155
Query: 329 VKLYKEDDSAT----------------EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHK 372
+ + + ++
Sbjct: 156 DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP 215
Query: 373 KSVRSVALHPTLYMFASASPDN-IKQWKCPE-GKFIQNLPGHNAIINSICVNNEGVLVSG 430
+ + A+ S D I + K I+ L H +N++ LVS
Sbjct: 216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSS 275
Query: 431 ADNGTMCFWD 440
+ + W+
Sbjct: 276 GADACIKRWN 285
Score = 39.9 bits (91), Expect = 4e-04
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 10/106 (9%)
Query: 362 GKSLCTLTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC 420
+ L T++ H K + ++ ++P S S D I +W H+ +I S+
Sbjct: 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLD 53
Query: 421 VNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFFF 466
+ S + + T+ + +V + +V
Sbjct: 54 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTN 99
Score = 39.9 bits (91), Expect = 4e-04
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 402 EGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVS 456
+ ++ + GHN I ++ VN L+SG+ +G + W + + + +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLD 53
Score = 38.8 bits (88), Expect = 0.001
Identities = 16/125 (12%), Positives = 36/125 (28%), Gaps = 11/125 (8%)
Query: 343 HPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPE 402
+P+I+GS+D I W ++ +H + S+ + + D +K +
Sbjct: 22 NPLISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITK 76
Query: 403 GKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPS 462
+F +A + V D+ + + S
Sbjct: 77 HEFGSQPKVASANNDGFTA------VLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQ 130
Query: 463 VFFFF 467
+
Sbjct: 131 NYVAV 135
Score = 38.4 bits (87), Expect = 0.001
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 250 TGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
++ +++GH + LTV+P L S D + W
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39
Score = 36.9 bits (83), Expect = 0.004
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 21 RGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDV 62
R + +I+ + H VN + L+++G D+ + W+V
Sbjct: 246 RPMKIIKALNAHKDGVNNLLWETP-STLVSSGADACIKRWNV 286
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 73.8 bits (179), Expect = 7e-15
Identities = 43/321 (13%), Positives = 89/321 (27%), Gaps = 30/321 (9%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTV---------------------------IRHYHGHL 33
V+D K L L+GH G V L + H
Sbjct: 37 VYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNST 96
Query: 34 SSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTK 93
I + I ++T RD+T VW + +++V + T P
Sbjct: 97 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 156
Query: 94 TVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTL 153
+ R + G S +L+ + + L I+ + H
Sbjct: 157 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC 216
Query: 154 VFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYR 213
+ S+ T ++ + T + + A W A +
Sbjct: 217 ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK 276
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK-LKLSLTGHVGSVRGLTVSPR 272
H + +GS + +++L +GK + ++ + + +
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK 335
Query: 273 HPYLFSCGDDRTVKCWDLEYN 293
+ + D L+++
Sbjct: 336 T-LVAAVEKDGQSFLEILDFS 355
Score = 73.4 bits (178), Expect = 8e-15
Identities = 58/412 (14%), Positives = 111/412 (26%), Gaps = 70/412 (16%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQV 90
GH++SV T L + +IT D RV+D K + L+GH + ++
Sbjct: 10 GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK-------- 60
Query: 91 GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSV 150
G L+S + +
Sbjct: 61 ----------------YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 104
Query: 151 HTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWK 210
+ + + + D + +L + + + P+
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKL------------PKESSVPDHGEEHDYPLVFHTPEENPY 152
Query: 211 LYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVS 270
V+ GH+ VR V +GS D + VWD+A K L+GH +
Sbjct: 153 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 210
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
S D T++ WDLE + + G+ ++
Sbjct: 211 HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS------------------ 252
Query: 331 LYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASA 390
+ + A S +H + + + S
Sbjct: 253 ------------DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 300
Query: 391 SPDNIKQWKCPEGKFIQ-NLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
S + + GK + N+ I S+ + ++ + +G
Sbjct: 301 SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352
Score = 67.6 bits (163), Expect = 7e-13
Identities = 47/259 (18%), Positives = 85/259 (32%), Gaps = 5/259 (1%)
Query: 214 VISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRH 273
+ GH+ V ++ + + TG+ DK+I+V+D K L L+GH G V L +
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 274 PYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
L S DRTV+ WD++ +S + + ++T D T+ ++
Sbjct: 66 -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW- 123
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
E S P HD + + + + + + +
Sbjct: 124 --KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 394 NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVR 453
+ W + K + L GH I S ++E A T
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 454 CVSGFPKPSVFFFFLAFSY 472
+ + FL +
Sbjct: 242 HTALVGLLRLSDKFLVSAA 260
Score = 48.4 bits (113), Expect = 1e-06
Identities = 36/260 (13%), Positives = 65/260 (25%), Gaps = 8/260 (3%)
Query: 185 SNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIK 244
++ I+ + ++ TGS D +
Sbjct: 62 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 245 VWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS 304
VW L +PY + + V GS D+
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 305 ESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKS 364
++ + L E I+ S D TIR+WDL G+
Sbjct: 182 TLIVWDVAQMKCLYIL------SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 365 LCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNE 424
+ TL H V + + SA+ D + + H +
Sbjct: 236 MYTLQGHTALVGLL--RLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVS 293
Query: 425 GVLVSGADNGTMCFWDWRTG 444
++ ++ R+G
Sbjct: 294 DNILVSGSENQFNIYNLRSG 313
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 73.0 bits (177), Expect = 7e-15
Identities = 34/277 (12%), Positives = 65/277 (23%), Gaps = 7/277 (2%)
Query: 16 HVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHT 75
+ V LT Y H P+ + R+WD +
Sbjct: 41 YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH------IL 94
Query: 76 NTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQ 135
T V + + + FL S + +
Sbjct: 95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF 154
Query: 136 EQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKA 195
+ +F + + +
Sbjct: 155 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 214
Query: 196 KALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL 255
+ + H G V + P A+ SADK IK+W++AT K++
Sbjct: 215 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 274
Query: 256 SLTGHVG-SVRGLTVSPRHPYLFSCGDDRTVKCWDLE 291
++ + L + L S + + + E
Sbjct: 275 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311
Score = 56.8 bits (135), Expect = 2e-09
Identities = 21/262 (8%), Positives = 63/262 (24%), Gaps = 30/262 (11%)
Query: 220 GWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
G + P + + + + + T H SP Y S
Sbjct: 18 GTAVVLGNTPAGDKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 280 GDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
V+ WD ++ + +++D+ R+ + +
Sbjct: 77 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG 136
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS---------------------- 377
+ + + + + + + ++
Sbjct: 137 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 196
Query: 378 -------VALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSG 430
A + + + E ++N+ ++ + + S
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 431 ADNGTMCFWDWRTGYNFQRLQV 452
+ + T+ W+ T + + V
Sbjct: 257 SADKTIKIWNVATLKVEKTIPV 278
Score = 55.7 bits (132), Expect = 4e-09
Identities = 43/258 (16%), Positives = 75/258 (29%), Gaps = 30/258 (11%)
Query: 213 RVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL--TGHVGSVRGLTVS 270
+ + H P + A+G +++WD L G V+ ++
Sbjct: 52 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD 111
Query: 271 PRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVK 330
+ + G+ R ++ + S+ F S I + +D
Sbjct: 112 SESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 171
Query: 331 LYKEDDSATE------------------ESHPVITGSHDCTIRLWDLAAGKSLCT----- 367
E + + D TI L++ G
Sbjct: 172 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS 231
Query: 368 --LTNHKKSVRSVALHPTLYMFASASPDN-IKQWKCPEGKFIQNLPGHNAIINSIC--VN 422
H SV + P ASAS D IK W K + +P I + +
Sbjct: 232 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 291
Query: 423 NEGVLVSGADNGTMCFWD 440
+ LVS + NG + F +
Sbjct: 292 TKQALVSISANGFINFVN 309
Score = 42.6 bits (98), Expect = 6e-05
Identities = 12/109 (11%), Positives = 25/109 (22%), Gaps = 3/109 (2%)
Query: 349 SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDN---IKQWKCPEGKF 405
+ ++ + + T H P+ Y AS I
Sbjct: 35 CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 94
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRC 454
+P + + I ++E ++ G F
Sbjct: 95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 143
Score = 34.5 bits (77), Expect = 0.025
Identities = 6/61 (9%), Positives = 19/61 (31%), Gaps = 15/61 (24%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+W++AT K++ ++ + + T L++ +
Sbjct: 264 IWNVATLKVEKTIPVG---------------TRIEDQQLGIIWTKQALVSISANGFINFV 308
Query: 61 D 61
+
Sbjct: 309 N 309
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 68.2 bits (165), Expect = 4e-13
Identities = 26/245 (10%), Positives = 62/245 (25%), Gaps = 20/245 (8%)
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG-SVRGLTVSPRHPYLF-SCGDD 282
A++ G+E+ + + V D+A+ + S ++P + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 283 RTVKCWDLEYNK----APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA 338
+ DL+ K A + + ++S G + T
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND------ 115
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQW 398
+ ++ A G + + + + +I +
Sbjct: 116 -------HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKM 168
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGF 458
GK+ LP N + + + F T F+ + +
Sbjct: 169 DVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 227
Query: 459 PKPSV 463
Sbjct: 228 LLYGY 232
Score = 62.4 bits (150), Expect = 3e-11
Identities = 27/264 (10%), Positives = 65/264 (24%), Gaps = 12/264 (4%)
Query: 200 MPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSL-- 257
+ + L V + A+ P + +L +
Sbjct: 69 LDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS 128
Query: 258 --TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPG----SMDSESGIFSM 311
G PR YL DD ++ + K V+ G ++ +
Sbjct: 129 TADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKG 188
Query: 312 TFDNSGSRL-ITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTL-T 369
+ ++ T DL GK+
Sbjct: 189 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA 248
Query: 370 NHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLV 428
+ + + P + + ++ + K I+ + + + +G L
Sbjct: 249 DLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLY 307
Query: 429 SGADNGTMCFWDWRTGYNFQRLQV 452
G + ++ T + +++
Sbjct: 308 LGGTFNDLAVFNPDTLEKVKNIKL 331
Score = 60.9 bits (146), Expect = 8e-11
Identities = 35/371 (9%), Positives = 82/371 (22%), Gaps = 64/371 (17%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTID-VLITAGRDSTARV 59
V D+A+ + S T + P +
Sbjct: 22 VVDVASDTVYKSCVMPDKF---------------GPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPS 119
D+ T N + + E + + + ++ L+
Sbjct: 67 IDLDTCKNTFHANLSSVP--------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDH-Y 117
Query: 120 LLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQL 179
++ + + E + + R L+ + + + + +
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQ--VYLMRAADDGSLYVAGPDIYKMDVKTGKY 175
Query: 180 VPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSA 239
+ A P W + + AT
Sbjct: 176 TVALPLRNWNRKGYSA-------PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 228
Query: 240 DKIIKVWDLATGKLKLSL-TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ 298
DL TGK SP+ P + + +DL+ K
Sbjct: 229 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRK---L 284
Query: 299 PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWD 358
+ + + + + FD G +L G + +++
Sbjct: 285 IKAANLDHTYYCVAFDKKGDKLYL-------------------------GGTFNDLAVFN 319
Query: 359 LAAGKSLCTLT 369
+ + +
Sbjct: 320 PDTLEKVKNIK 330
Score = 58.2 bits (139), Expect = 7e-10
Identities = 32/328 (9%), Positives = 75/328 (22%), Gaps = 45/328 (13%)
Query: 39 ISLHPTIDVLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV---------------- 82
+L + +I + V DV + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 83 -----------TQASEPQVGTKTVLLESCERIMFVLGTAGFLLSC---LPSLLDFGTIRP 128
+ + + + + + L D ++P
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 129 WQLQIIQEQCFLNLQEVQRHSVH---TLVFRSLKRTHDMFISCQELVPSTENQLVPTTAS 185
+L++ L + V+ + L+ + + + + +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181
Query: 186 NTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKV 245
+ A P W + + AT
Sbjct: 182 RNWNRKGYSA-------PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 234
Query: 246 WDLATGKLKLSL-TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDS 304
DL TGK SP+ P + + +DL+ K + +
Sbjct: 235 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRK---LIKAANL 290
Query: 305 ESGIFSMTFDNSGSRLITTEADKTVKLY 332
+ + + FD G +L + ++
Sbjct: 291 DHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 42.8 bits (99), Expect = 6e-05
Identities = 20/206 (9%), Positives = 45/206 (21%), Gaps = 44/206 (21%)
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
G + H Y+ + D+ + + M + G +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDT-VYKSCVMPDKFGPGTAMMAPDNRTA----- 54
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN------HKKSVRSVA 379
+ +H I DL K+ +S+ S A
Sbjct: 55 -------------------YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 95
Query: 380 LHPTLYMFASASPDN-------------IKQWKCPEGKFIQNLPGHNAIINSICVNNEGV 426
+ P + ++ + +G + + +
Sbjct: 96 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 155
Query: 427 LVSGADNGTMCFWDWRTGYNFQRLQV 452
+ D +TG L +
Sbjct: 156 GSLYVAGPDIYKMDVKTGKYTVALPL 181
Score = 39.3 bits (90), Expect = 7e-04
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 218 HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
CVA + + G + V++ T + ++ G +
Sbjct: 290 LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
Score = 33.9 bits (76), Expect = 0.038
Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 20/85 (23%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+DL KL + H + ++ D L G + V+
Sbjct: 276 KYDLKQRKL---------------IKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVF 318
Query: 61 DVRTKANVYTLT---GHTNTIASVV 82
+ T V + G +T V
Sbjct: 319 NPDTLEKVKNIKLPGGDMSTTTPQV 343
Score = 29.7 bits (65), Expect = 0.84
Identities = 14/132 (10%), Positives = 30/132 (22%), Gaps = 42/132 (31%)
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLT-NHKKSVRSVALHPTLYMFASASPDNIKQWKCPEG 403
+I ++ + + D+A+ + K + + +PD
Sbjct: 11 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMM----------APD---------N 51
Query: 404 KFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSV 463
+ V G + D T N S +
Sbjct: 52 RT--------------------AYVLNNHYGDIYGIDLDTCKNTF--HANLSSVPGEVGR 89
Query: 464 FFFFLAFSYLNR 475
+ A S +
Sbjct: 90 SMYSFAISPDGK 101
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 67.6 bits (163), Expect = 5e-13
Identities = 35/271 (12%), Positives = 66/271 (24%), Gaps = 6/271 (2%)
Query: 26 IRHYHGHLSS-VNTISLHPTID--VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVV 82
+ + GH SS V T+ P L + VW ++ + + V+
Sbjct: 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 114
Query: 83 TQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNL 142
SL + +Q
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174
Query: 143 QEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPK 202
+ ++ S + + S +I + +
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 203 PQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
+ K + ++ FAT AD I+VWD+ T K T
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294
Query: 263 SVRGLTVS---PRHPYLFSCGDDRTVKCWDL 290
+ V + + S D T+ ++L
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 47.6 bits (111), Expect = 1e-06
Identities = 35/278 (12%), Positives = 70/278 (25%), Gaps = 43/278 (15%)
Query: 205 WHAPWKLYRVISGHLG-WVRCVAVEPGN--EWFATGSADKIIKVWDLATGKLKLSL---- 257
+ +GH V V P ++ +G + VW K S+
Sbjct: 48 GDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV 107
Query: 258 ----TGHVGSVRGLTVSP--RHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSM 311
G + ++ R + G D + + S S+
Sbjct: 108 KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS-WDSGNSLGEVSGHSQRINACH 166
Query: 312 TFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNH 371
+ R +T D +V Y+ S +
Sbjct: 167 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 226
Query: 372 KKSVRSVALHPTLYM------------------------FASASPDN-IKQWKCPEGKFI 406
+ + ++ FA+ D I+ W K +
Sbjct: 227 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV 286
Query: 407 QNLPGHNAIINSICV----NNEGVLVSGADNGTMCFWD 440
Q + + V G ++S + +GT+ F++
Sbjct: 287 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 47.2 bits (110), Expect = 2e-06
Identities = 38/278 (13%), Positives = 67/278 (24%), Gaps = 41/278 (14%)
Query: 216 SGHLGWVRCVAVEPGNEWFATGSADK-IIKVWDLATGKLKL--SLTGHVGS-VRGLTVSP 271
S + ++ +P A ++ D K+ TGH S V + SP
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73
Query: 272 RHP--YLFSCGDDRTVKCWDLEYNKAPVQPGSMDS------ESGIFSMTFDNSGSRLITT 323
YL S + V W ++K I +++D G RL
Sbjct: 74 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133
Query: 324 EADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN------------- 370
+ + V S + T+ +
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 193
Query: 371 ----------HKKSVRSVALHPTLYMFASASPDNIKQ------WKCPEGKFIQNLPGHNA 414
VR V P F + K +
Sbjct: 194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 253
Query: 415 IINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQV 452
I ++ + + + T+ WD T Q+ +
Sbjct: 254 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL 291
Score = 39.5 bits (90), Expect = 6e-04
Identities = 40/334 (11%), Positives = 79/334 (23%), Gaps = 34/334 (10%)
Query: 34 SSVNTISLHPTIDVLITAGRDSTA-RVWDVRTKAN--VYTLTGHTNTIASVVTQASEPQV 90
+ +S PT + + S R D V TGH +++ + V P
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTV--KFSPIK 75
Query: 91 GTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQ-CFLNLQEVQRHS 149
G++ + + V G S + + I F +
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 150 VHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPW 209
+ + N + + + ++ +
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195
Query: 210 KLYRVISGHLGWVRCVAVEP----GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
R +VR V P + K V
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEA 325
+ G D T++ WD+ +K + + G + +G+ I
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI---- 311
Query: 326 DKTVKLYKEDDSATEESHPVITGSHDCTIRLWDL 359
I+ S D T+ ++L
Sbjct: 312 --------------------ISLSLDGTLNFYEL 325
Score = 34.5 bits (77), Expect = 0.024
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 15/63 (23%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTID-VLITAGRDSTARV 59
VWD+ T K T + + T + +I+ D T
Sbjct: 277 VWDVTTSKCVQKWTL--------------DKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Query: 60 WDV 62
+++
Sbjct: 323 YEL 325
Score = 32.2 bits (71), Expect = 0.13
Identities = 19/143 (13%), Positives = 32/143 (22%), Gaps = 14/143 (9%)
Query: 345 VITGSHDCTIRLWDLAAGK--SLCTLTNHKKS-VRSVALHPTL--YMFASASPD-NIKQW 398
+R D K + T H S V +V P S + W
Sbjct: 33 AYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 92
Query: 399 KCPEGKFIQNL--------PGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRL 450
K ++ I+ I + EG + G F + + + L
Sbjct: 93 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSL 152
Query: 451 QVRCVSGFPKPSVFFFFLAFSYL 473
+
Sbjct: 153 GEVSGHSQRINACHLKQSRPMRS 175
Score = 29.5 bits (64), Expect = 0.84
Identities = 21/203 (10%), Positives = 48/203 (23%), Gaps = 24/203 (11%)
Query: 262 GSVRGLTVSPRHPYL-FSCGDDRTVKCWDLEYNK-APVQPGSMDSESGIFSMTF--DNSG 317
L+ P + + CG V+C D +K PV + S + ++ F
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRS 377
L + + V ++ + + + +
Sbjct: 78 QYLCSGDESGKVI-----------VWGWTFDKESNSVEVNVKSEFQV------LAGPISD 120
Query: 378 VALHPTLYMFASASPDN---IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNG 434
++ G + + GH+ IN+ + + S
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180
Query: 435 TMCFWDWRTGYNFQRLQVRCVSG 457
++ R
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHK 203
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 64.1 bits (154), Expect = 8e-12
Identities = 16/143 (11%), Positives = 38/143 (26%), Gaps = 4/143 (2%)
Query: 149 SVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAP 208
L F + I P+ + + S P
Sbjct: 206 DRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD 265
Query: 209 WKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
+++ + + ++ ++ +D+ T K +T ++ L
Sbjct: 266 YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLR 321
Query: 269 VSPRHPYLFSCGDDRTVKCWDLE 291
+S + DD + + LE
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLE 344
Score = 56.0 bits (133), Expect = 3e-09
Identities = 28/351 (7%), Positives = 64/351 (18%), Gaps = 51/351 (14%)
Query: 31 GHLSSVNTISLHPTIDVLITAGRDS--TARVWDVRTKANVYTLTGHTNTIASVVTQASEP 88
+ + V G ++D RT + + ++ +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG-KAEKFEENLGNVFAMGVDRNGK 98
Query: 89 QVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNL----QE 144
E + S + DF +
Sbjct: 99 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 158
Query: 145 VQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQ 204
H + T + + L S + L
Sbjct: 159 QAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY--YLSYRSLDPSPDRVVLNFSFEV 216
Query: 205 WHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADK-------IIKVWDLATGKLKLSL 257
P+ + G + P + G D D ++ + L
Sbjct: 217 VSKPFVI----PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL 272
Query: 258 TGHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSG 317
+ Y + + +D++ K + +
Sbjct: 273 ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN------NLTDLRLSADR 326
Query: 318 SRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTL 368
+ + D I + L + T+
Sbjct: 327 KTV-------------------------MVRKDDGKIYTFPLEKPEDERTV 352
Score = 51.4 bits (121), Expect = 1e-07
Identities = 16/252 (6%), Positives = 49/252 (19%), Gaps = 28/252 (11%)
Query: 199 PMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT 258
P + + + P G + I V+D+ K+ + T
Sbjct: 117 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-T 175
Query: 259 GHVGSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMD-----SESGIFSMTF 313
L+ D + S
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKK 373
+ + + D + + L +
Sbjct: 236 VPRSMTSEAG------------------EYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277
Query: 374 SVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG-VLVSGAD 432
+ A + + + + + + + + ++ + ++ D
Sbjct: 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNN---LTDLRLSADRKTVMVRKD 334
Query: 433 NGTMCFWDWRTG 444
+G + +
Sbjct: 335 DGKIYTFPLEKP 346
Score = 42.5 bits (98), Expect = 8e-05
Identities = 22/281 (7%), Positives = 54/281 (19%), Gaps = 38/281 (13%)
Query: 232 EWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDD--RTVKCWD 289
+ A S + + D++ + +R + F G + +D
Sbjct: 16 DLIAFVSRGQA-FIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 290 LEYNKA-PVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITG 348
KA + + + + E + +IT
Sbjct: 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 132
Query: 349 -----------------------SHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLY 385
I ++D+ K T + A
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSK 191
Query: 386 MFASASPDN--------IKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMC 437
S + + + +P N + + +
Sbjct: 192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLND 251
Query: 438 FWDWRTGYNFQRLQVRCVSGFPKPSVFFFFLAFSYLNRVGV 478
+ + N R + + +
Sbjct: 252 MYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292
Score = 34.1 bits (76), Expect = 0.034
Identities = 6/78 (7%), Positives = 20/78 (25%), Gaps = 20/78 (25%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+D+ T K+ +++ + L ++ D +
Sbjct: 302 KYDVKTRKVT--------------------EVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Query: 61 DVRTKANVYTLTGHTNTI 78
+ + T+ +
Sbjct: 342 PLEKPEDERTVETDKRPL 359
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 58.9 bits (141), Expect = 4e-10
Identities = 26/290 (8%), Positives = 62/290 (21%), Gaps = 66/290 (22%)
Query: 220 GWVRCVAVEPGNEWFAT----------GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
G+ A+ P + G+ ++++ D T + + +
Sbjct: 17 GFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPS 76
Query: 270 SPRHP------YLFSCGDDRTVKCWDLEYNK-----APVQPG----SMDSESGIFSMTFD 314
L+ ++ + ++
Sbjct: 77 PYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCES 136
Query: 315 NSGSRLITTEADKTVKLYKEDDSATEESHPV-----------ITGSHDCTIRLWDLAAGK 363
+ K K D + P + ++ +R D + K
Sbjct: 137 GKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDK 196
Query: 364 SLC--TLTNHKKSVRSVALHPTLYMFASASPDNIKQW-----------KCPEGKFIQNLP 410
+ + R+ P + + + K P +
Sbjct: 197 PAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDL 256
Query: 411 GHNAI-------------INSICVNNEG---VLVSGADNGTMCFWDWRTG 444
+ SI V+ + A + + D RTG
Sbjct: 257 KSKQRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLV-VMDARTG 305
Score = 46.9 bits (110), Expect = 2e-06
Identities = 27/240 (11%), Positives = 53/240 (22%), Gaps = 42/240 (17%)
Query: 245 VWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG----------DDRTVKCWDLEYNK 294
V+D KL + G G G ++P V+ D
Sbjct: 2 VYDADAKKLLGQIDG--GFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLD 59
Query: 295 --------------APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSAT- 339
P + S G + + + +T + K+ E D+A
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAAC 119
Query: 340 -----EESHPVITGSHDC-TIRLWDLAAGKSLCTLT---NHKKSVRSVALHPTLY---MF 387
+ + A GK ++ + Y
Sbjct: 120 VLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYL 179
Query: 388 ASASPDNIKQWKCPEGK--FIQNLPGHNAIINSICVNNEGV-LVSGADNGTMCFWDWRTG 444
+ N++ K F + + G+ + + G
Sbjct: 180 FTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKG 239
Score = 40.4 bits (93), Expect = 4e-04
Identities = 30/332 (9%), Positives = 59/332 (17%), Gaps = 65/332 (19%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V+D KL + G G G I T R +
Sbjct: 2 VYDADAKKLLGQIDG--GFGPGF-AIAPDRKASVVATTYF-----SRGSHGTRTDVVEII 53
Query: 61 DVRTKANVYTLTGHT--------------------------NTIASVVTQASEPQVGTKT 94
D T + + ASV + +
Sbjct: 54 DNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSE 113
Query: 95 VLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLV 154
+ +C L + + + V
Sbjct: 114 IDTAACVLAYPAGDDRFTALCE-----SGKALTVTLDANGK------EAKRTMSDAFIDV 162
Query: 155 FRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRV 214
+ + L + + S + L + +
Sbjct: 163 DKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQ 222
Query: 215 ISGHLGWVRCVAV----------EPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSV 264
+ R + +PG + + K + V +
Sbjct: 223 TAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQK-------VEPL 275
Query: 265 RGLTVSP--RHPYLFSCGDDRTVKCWDLEYNK 294
+ VS + + V D
Sbjct: 276 VSIQVSEDDKPLFYGLTATSDLV-VMDARTGA 306
Score = 31.9 bits (71), Expect = 0.14
Identities = 7/48 (14%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 222 VRCVAVEPGNE--WFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
+ + V ++ ++ + ++ V D TG L+ + L
Sbjct: 275 LVSIQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 58.3 bits (139), Expect = 6e-10
Identities = 25/312 (8%), Positives = 65/312 (20%), Gaps = 38/312 (12%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTID-VLITAGRDSTARV 59
V D + +T + + P T + +
Sbjct: 15 VIDTEKMAVDKVITIA--------------DAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 60 WDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPS 119
D+ T + + T + KT+ + + +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 120 LLDFGTIRPWQLQIIQEQC----------FLNLQEVQRHSVHTLVFRSLKRTHDMFISCQ 169
+ + R Q + +++ K
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 170 ELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEP 229
S+ + + A + G + V
Sbjct: 181 AQPDVLAV--WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 230 GNEWFATGSA----------DKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
+ ++ + + +++ +DL + S + VS ++
Sbjct: 239 MDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNAS-IKRVPLPHSYYSVNVSTDGSTVWLG 297
Query: 280 GDDRTVKCWDLE 291
G + +D E
Sbjct: 298 GALGDLAAYDAE 309
Score = 56.4 bits (134), Expect = 3e-09
Identities = 18/227 (7%), Positives = 47/227 (20%), Gaps = 20/227 (8%)
Query: 232 EWFATGSADKIIKVWDLATGKL--KLSLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKCW 288
++ + + V D + +++ + V+P + + ++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 289 DLEYNK---APVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPV 345
DL + + +F G L E+ ++L
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELT------------- 108
Query: 346 ITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKF 405
+ L+D + + +A D
Sbjct: 109 HFEVQPTRVALYDAETLSRRKA-FEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV 167
Query: 406 IQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQV 452
+ V +G M + +
Sbjct: 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214
Score = 52.5 bits (124), Expect = 5e-08
Identities = 30/356 (8%), Positives = 81/356 (22%), Gaps = 51/356 (14%)
Query: 46 DVLITAGRDSTARVWDVRTKANVYTLT--GHTNTIASVVTQASEPQV-----GTKTVL-- 96
D ++ R V D A +T T + +++++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 97 -LESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQIIQE---QCFLNLQEVQRHSVHT 152
L + E + + + + + R +++
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 153 LVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQI------IQQAKAKALPMPKPQWH 206
S ++ + L + + + + + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 207 APWKLYRVISG---HLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGS 263
P L + + + + DL TG++ + +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241
Query: 264 VRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITT 323
+ + + G ++ +DLE N + +S+ GS +
Sbjct: 242 FY-FSTAVNPAKTRAFGAYNVLESFDLEKNA---SIKRVPLPHSYYSVNVSTDGSTV--- 294
Query: 324 EADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
G + +D + + + S+A
Sbjct: 295 ----------------------WLGGALGDLAAYDAETLEKKGQVDLPGNASMSLA 328
Score = 41.7 bits (96), Expect = 1e-04
Identities = 26/272 (9%), Positives = 50/272 (18%), Gaps = 7/272 (2%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
DL TG+ + R + LS V +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERV---KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLL---SCL 117
A + + A L + GT S
Sbjct: 117 VALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWE 176
Query: 118 PSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTEN 177
+ Q R + + + + E
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236
Query: 178 QLVPTTASNTQIIQQAKAKALPMPKPQ-WHAPWKLYRVISGHLGWVRCVAVEPGNEWFAT 236
+++ +T + + + V V
Sbjct: 237 RIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWL 296
Query: 237 GSADKIIKVWDLATGKLKLSLTGHVGSVRGLT 268
G A + +D T + K + + L
Sbjct: 297 GGALGDLAAYDAETLEKKGQVDLPGNASMSLA 328
Score = 35.6 bits (80), Expect = 0.012
Identities = 9/83 (10%), Positives = 20/83 (24%), Gaps = 17/83 (20%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+DL + H S ++++ + G +
Sbjct: 264 SFDLEKNASIKRVP---------------LPH--SYYSVNVSTDGSTVWLGGALGDLAAY 306
Query: 61 DVRTKANVYTLTGHTNTIASVVT 83
D T + N S+ +
Sbjct: 307 DAETLEKKGQVDLPGNASMSLAS 329
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 55.8 bits (133), Expect = 5e-09
Identities = 21/287 (7%), Positives = 50/287 (17%), Gaps = 62/287 (21%)
Query: 218 HLGWVRCVAVEPGNEWFA----------TGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
++ FA G ++V+D T + +
Sbjct: 63 LGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122
Query: 268 TVSPRHPYL--------FSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFS------MTF 313
F + Q S I
Sbjct: 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS-DDQLTKSASCFHIHPGAAATHYLG 181
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHP-------------VITGSHDCTIRLWDLA 360
S + A T + V + A
Sbjct: 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAA 241
Query: 361 AGKSLCTLTNHKKSVRSVALHPTLYMFASASPD--------------------NIKQWKC 400
+ ++ ++ + + + N
Sbjct: 242 GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301
Query: 401 PEGKFIQNLPGHNAIINSICVNNEG---VLVSGADNGTMCFWDWRTG 444
G+ + + ++I +G + A + +D +
Sbjct: 302 SVGQTSGPISNGHD-SDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347
Score = 50.0 bits (118), Expect = 3e-07
Identities = 18/296 (6%), Positives = 53/296 (17%), Gaps = 49/296 (16%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V+D T + R R + + + +L S A
Sbjct: 100 VFDPVTFLPIADIELPDA-PRFSVGPRVHIIGNCASSAC-------LLFFLFGSSAAAGL 151
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
V ++ + A L
Sbjct: 152 SVPGASDDQLTKSASCFHI-------------------------HPGAAATHYLGS---- 182
Query: 121 LDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLV 180
+ + Q ++ + + + + L
Sbjct: 183 ---CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP----GMLVWAVASSILQ 235
Query: 181 PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSAD 240
+ ++ A K V + + + +
Sbjct: 236 GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295
Query: 241 KIIKVWDLATGKLKLSLTGHVGSVRGLTVSP--RHPYLFSCGDDRTVKCWDLEYNK 294
+ G+ ++ + + + + +D ++
Sbjct: 296 --TSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
Score = 40.0 bits (92), Expect = 5e-04
Identities = 9/164 (5%), Positives = 35/164 (21%), Gaps = 9/164 (5%)
Query: 206 HAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVR 265
A + + ++ + A +K ++ G+ +
Sbjct: 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRK 257
Query: 266 GLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDN-SGSRLITTE 324
+ + + V+ + + + G
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMI------LTVEHSRSCLAAAENTSSVTASVGQTSGPIS 311
Query: 325 ADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTL 368
+ S + + ++D A+ + ++
Sbjct: 312 NGHDS--DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
Score = 30.7 bits (68), Expect = 0.34
Identities = 16/234 (6%), Positives = 33/234 (14%), Gaps = 50/234 (21%)
Query: 234 FATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF----------SCGDDR 283
+ W G +
Sbjct: 37 TLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTD 96
Query: 284 TVKCWDLEYNKAPVQPGS-----MDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA 338
V+ +D + + S + L
Sbjct: 97 YVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL------------------ 138
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSL-------CTLTNHKKSVRSVALHPTLYMFASAS 391
+ + C + + + AS
Sbjct: 139 ------LFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192
Query: 392 PDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGY 445
+ N + N G+LV A ++ D
Sbjct: 193 AAAPAAAGIVGAQC---TGAQNCSSQAAQANYPGMLVW-AVASSILQGDIPAAG 242
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 54.0 bits (129), Expect = 2e-08
Identities = 26/173 (15%), Positives = 42/173 (24%), Gaps = 29/173 (16%)
Query: 226 AVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTV 285
+ N + T I + D +T ++K L +V +S YLF G D V
Sbjct: 27 DWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKV 85
Query: 286 KCWDLEYNKAPVQ---PGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEES 342
DL + ++ S S I
Sbjct: 86 NMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAI--------------------- 124
Query: 343 HPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFA-SASPDN 394
+ D + + + HP + A AS
Sbjct: 125 ---AGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 174
Score = 44.8 bits (105), Expect = 1e-05
Identities = 26/230 (11%), Positives = 47/230 (20%), Gaps = 24/230 (10%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLT-----GHVGSVRGLTVSPRHPY 275
V + + D + + DL + Y
Sbjct: 63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKY 122
Query: 276 LF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKE 334
D E + P + S + I +
Sbjct: 123 AIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF---- 177
Query: 335 DDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLT-NHKKSVRSVALHPTLYMFASASPD 393
++ I L D +L T + ++ + L + F +A+
Sbjct: 178 ----------IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA 227
Query: 394 NIKQWKCP--EGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDW 441
K EGK + + N G T D
Sbjct: 228 RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDD 277
Score = 27.1 bits (59), Expect = 5.9
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 17/72 (23%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+ D +T ++K L +V+ L + L GRD +
Sbjct: 46 LIDGSTYEIKTVLDTG-----------------YAVHISRLSASGRYLFVIGRDGKVNMI 88
Query: 61 DVRTKANVYTLT 72
D+ K
Sbjct: 89 DLWMKEPTTVAE 100
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 52.9 bits (125), Expect = 3e-08
Identities = 19/182 (10%), Positives = 45/182 (24%), Gaps = 8/182 (4%)
Query: 204 QWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKL--SLTGHV 261
+ A + I DL++G K ++
Sbjct: 179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 238
Query: 262 GSVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLI 321
+ R P + + + + + + +G RL
Sbjct: 239 EAERADGWRPGGWQQVAYHRALDRIYLLV-DQRDEWRHKTASRFVVVLDA---KTGERLA 294
Query: 322 TTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALH 381
E + + S E+ + D T+ + D +G+ L ++ + +
Sbjct: 295 KFEMGHEI--DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTA 352
Query: 382 PT 383
Sbjct: 353 DM 354
Score = 51.7 bits (122), Expect = 7e-08
Identities = 34/309 (11%), Positives = 74/309 (23%), Gaps = 27/309 (8%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V D G++ + G + V ++ +T+ + R V+
Sbjct: 32 VIDGEAGRVIGMI--DGGFLPNPVV-ADDGSFIAHASTVF-----SRIARGERTDYVEVF 83
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLL-----ESCERIMFVLGTAGFLLS 115
D T + V T + L + V
Sbjct: 84 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 143
Query: 116 CLPSLLDFGTI---RPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELV 172
L + ++ + + + I+
Sbjct: 144 MLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 203
Query: 173 PSTENQLVPTTASNTQIIQQAKAKALPMPKPQWH--------APWKLYRVISGHLGWVRC 224
+ PT I + A +P + ++ ++ H R
Sbjct: 204 QKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 263
Query: 225 VAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP--RHPYLFSCGDD 282
+ + + +A + + V D TG+ + + VS + D
Sbjct: 264 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD 322
Query: 283 RTVKCWDLE 291
+T+ D E
Sbjct: 323 KTLYIHDAE 331
Score = 49.0 bits (115), Expect = 7e-07
Identities = 28/282 (9%), Positives = 66/282 (23%), Gaps = 21/282 (7%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V+D T + R G + +++ + V
Sbjct: 82 VFDPVTLLPTADIELPDA-------PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQV---GTKTVLLESCERIMFVLGTAGF----- 112
D+ KA L + G+ + E + T F
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 194
Query: 113 -LLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQEL 171
L++ G + Q L+ + + + + + Q++
Sbjct: 195 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQV 254
Query: 172 VPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGN 231
+ A + + + V
Sbjct: 255 AYHRALDRIYLLVDQRDEW--RHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDE 311
Query: 232 EW--FATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSP 271
+ +A + DK + + D +G+ S+ + +T +
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353
Score = 48.2 bits (113), Expect = 1e-06
Identities = 28/288 (9%), Positives = 70/288 (24%), Gaps = 64/288 (22%)
Query: 220 GWVRCVAVEPGNEWFAT----------GSADKIIKVWDLATGKLKLSLTGHVGSVRGLTV 269
G++ V + A G ++V+D T + +
Sbjct: 47 GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGT 106
Query: 270 SPRHPYLFSCG--------------------DDRTVKCWDLEYNKAPVQPG-------SM 302
P L G + D+
Sbjct: 107 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR 166
Query: 303 DSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAG 362
D + + + T + + ++++ ++ ++ I DL++G
Sbjct: 167 DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 226
Query: 363 K--SLCTLTNHKKSVRSVALHPTLYMFASASPDN---------------------IKQWK 399
L + ++ R+ P + + +
Sbjct: 227 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 286
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEG---VLVSGADNGTMCFWDWRTG 444
G+ + + I+SI V+ + + + T+ D +G
Sbjct: 287 AKTGERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAESG 333
Score = 42.1 bits (97), Expect = 1e-04
Identities = 22/225 (9%), Positives = 48/225 (21%), Gaps = 35/225 (15%)
Query: 235 ATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG----------DDRT 284
A +A V D G++ + G + V+ ++
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMI--DGGFLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 285 VKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHP 344
V+ +D ++ + + + ++
Sbjct: 80 VEVFDPVTLL---PTADIELPDAPRFLVGTYPWMTSL---------------TPDGKTLL 121
Query: 345 VITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFAS-----ASPDNIKQWK 399
S + + DL L T +M +
Sbjct: 122 FYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 181
Query: 400 CPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTG 444
+ + I + G LV G + D +G
Sbjct: 182 EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 226
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 50.7 bits (120), Expect = 2e-07
Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 5/210 (2%)
Query: 203 PQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVG 262
P+ WK+ V + ++ N + T I + D + K+ +
Sbjct: 5 PEMRESWKVL-VKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-Y 62
Query: 263 SVRGLTVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQ---PGSMDSESGIFSMTFDNSGSR 319
+V +S YL G D + DL + +++ S S
Sbjct: 63 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRY 122
Query: 320 LITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVA 379
I + ++ + G T ++ H + + +V
Sbjct: 123 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 182
Query: 380 LHPTLYMFASASPDNIKQWKCPEGKFIQNL 409
+ + DN+ F+ +
Sbjct: 183 ETGKVLLVNYKDIDNLTVTSIGAAPFLADG 212
Score = 41.5 bits (96), Expect = 2e-04
Identities = 42/384 (10%), Positives = 98/384 (25%), Gaps = 59/384 (15%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
+ D + K+ + +V+ + + L+ GRD+ +
Sbjct: 46 LVDGDSKKIVKVIDTG-----------------YAVHISRMSASGRYLLVIGRDARIDMI 88
Query: 61 DVRTKAN--VYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLP 118
D+ K V + + ++ + + + G +
Sbjct: 89 DLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 148
Query: 119 -------SLLDFGTIRPWQL---QIIQEQCFLNLQEVQRHSVHTLVFRSLKRT---HDMF 165
+ R + E + + V+ +L T F
Sbjct: 149 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF 208
Query: 166 ISCQELVPSTENQLVPTTASNTQIIQQAKAKAL--PMPKPQWHAPWKLYRVISGHLGWVR 223
++ S + SN + +K + L + + P + + G V
Sbjct: 209 LADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW 268
Query: 224 CVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF------ 277
+ G+ K + K L G G + P+ +L+
Sbjct: 269 STSHLGDGSISLIGTDPKNHPQYA---WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFN 325
Query: 278 -SCGDDRTVKCWDLEYNKAPVQ-------PGSMDSESGIFSMTFDNSGSRLI-----TTE 324
++V +DL+ A Q + + ++ G +
Sbjct: 326 PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN 385
Query: 325 ADKTVKLYKEDDSATEESHPVITG 348
+ + D T + V+
Sbjct: 386 DSSALVVV---DDKTLKLKAVVKD 406
Score = 26.5 bits (57), Expect = 9.1
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 223 RCVAVEP---GNE-WFATGSA---DKIIKVWDLATGKLKLSLTGH 260
R V E G+E WF+ + + V D T KLK +
Sbjct: 363 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 407
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 47.9 bits (112), Expect = 1e-06
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 234 FATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKCWDLEY 292
+ S I V D+ + K+ ++ + G +SP ++ + V D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 293 N 293
N
Sbjct: 64 N 64
Score = 44.5 bits (103), Expect = 2e-05
Identities = 28/265 (10%), Positives = 61/265 (23%), Gaps = 23/265 (8%)
Query: 209 WKLYRVISGHLGWVRCVAVEP-GNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGL 267
K+ I + P G + + + + + D AT + ++
Sbjct: 22 NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80
Query: 268 TVSPRHPYLFSCGDDRTVKCWDLEYNKAPVQPGSMDSESGI------------------F 309
+ T+ D N + S G+
Sbjct: 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTV 140
Query: 310 SMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLT 369
S+ + + + T ++ K T+ I + ++
Sbjct: 141 SVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA 200
Query: 370 NHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEG--VL 427
+ + + K +P I V +G V
Sbjct: 201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVY 259
Query: 428 VSGADNGTMCFWDWRTGYNFQRLQV 452
V+ + T+ D T + V
Sbjct: 260 VALSFCNTVSVIDTATNTITATMAV 284
Score = 41.4 bits (95), Expect = 1e-04
Identities = 32/312 (10%), Positives = 73/312 (23%), Gaps = 36/312 (11%)
Query: 1 VWDLATGKLKLSLTGHVGSVRGLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDSTARVW 60
V D+ + K+ ++ + G + G V + + +
Sbjct: 16 VIDVTSNKVTATIPVG-SNPMGAVI--SPDGTK-------------VYVANAHSNDVSII 59
Query: 61 DVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFVLGTAGFLLSCLPSL 120
D T + T+ ++ V+ + T + + ++
Sbjct: 60 DTATNNVIATVPAGSSPQGVAVSPDGKQ-----------VYVTNMASSTLSVIDTTSNTV 108
Query: 121 LDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLV 180
L + L V ++ + +S + +
Sbjct: 109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP-----KGI 163
Query: 181 PTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSAD 240
T T++ + +
Sbjct: 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYF 223
Query: 241 KIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKCWDLEYNK--APV 297
+ + D T K+ + G+ V+P ++ + TV D N A +
Sbjct: 224 NTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Query: 298 QPGSMDSESGIF 309
G SG F
Sbjct: 283 AVGKNPYASGQF 294
Score = 40.2 bits (92), Expect = 3e-04
Identities = 30/322 (9%), Positives = 67/322 (20%), Gaps = 43/322 (13%)
Query: 47 VLITAGRDSTARVWDVRTKANVYTLTGHTNTIASVVTQASEPQVGTKTVLLESCERIMFV 106
I V DV + T+ +N + +V++ ++V
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG---------------TKVYV 48
Query: 107 LGTAGFLLSCLPSLLDFGTIRPWQLQIIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFI 166
+S ++D T V+ S +
Sbjct: 49 ANAHSNDVS----IIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104
Query: 167 SCQELVPSTENQLVPTTASNTQIIQQAKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVA 226
S + A + + + K + +A
Sbjct: 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIA 164
Query: 227 VEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCGDDRTVK 286
V P + D + + + G+ V+P + D+
Sbjct: 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFN 224
Query: 287 CWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVI 346
+ + + G ++ +
Sbjct: 225 TVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKV------------------------YV 260
Query: 347 TGSHDCTIRLWDLAAGKSLCTL 368
S T+ + D A T+
Sbjct: 261 ALSFCNTVSVIDTATNTITATM 282
Score = 32.2 bits (71), Expect = 0.13
Identities = 14/184 (7%), Positives = 42/184 (22%), Gaps = 28/184 (15%)
Query: 275 YLF-SCGDDRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYK 333
+ + + + + D+ NK ++ S G+++
Sbjct: 3 FAYIANSESDNISVIDVTSNK---VTATIPVGSNPMGAVISPDGTKVY------------ 47
Query: 334 EDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPD 393
+ +H + + D A + T+ ++ +
Sbjct: 48 ------------VANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS 95
Query: 394 NIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVR 453
+ + + ++ +G + +NG T V
Sbjct: 96 STLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155
Query: 454 CVSG 457
Sbjct: 156 VGRS 159
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 44.8 bits (104), Expect = 1e-05
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 234 FATGSADKIIKVWDL-ATGKLKL-SLTGHVGSVRGLTVSPRHPYLF-SCGDDRTVKCWDL 290
+ + I VW+L G L L + G V+ + VSP YL+ + V + +
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 291 EYNK-APVQPGSMDSESGIFSMTFDNSG 317
+ A + ++ D+ G
Sbjct: 67 APDDGALTFAAESALPGSLTHISTDHQG 94
Score = 39.0 bits (89), Expect = 9e-04
Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 7/123 (5%)
Query: 346 ITGSHDCTIRLWDLAAGKSLCTL--TNHKKSVRSVALHPT-LYMFASASPDN-IKQWKCP 401
I I +W+L +L + V+ + + P Y++ P+ + ++
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 402 EGKFIQNLPGHNAIINSIC---VNNEGVLVSGADNGTMCFWDWRTGYNFQRLQVRCVSGF 458
+A+ S+ +++G V R V V G
Sbjct: 68 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127
Query: 459 PKP 461
Sbjct: 128 DGC 130
Score = 37.5 bits (85), Expect = 0.003
Identities = 32/282 (11%), Positives = 64/282 (22%), Gaps = 15/282 (5%)
Query: 22 GLTVIRHYHGHLSSVNTISLHPTIDVLITAGRDS-TARVWDVRTKANVYTLTGHTNTIAS 80
LT+ + V + + P L R + + T + S
Sbjct: 26 ALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 84
Query: 81 VVTQASEP--------QVGTKTVLLESCERIMFVLGTAGFLLSCLPSLLDFGTIRPWQLQ 132
+ +++ V + E + V +
Sbjct: 85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWV 144
Query: 133 IIQEQCFLNLQEVQRHSVHTLVFRSLKRTHDMFISCQELVPSTENQLVPTTASNTQIIQQ 192
+Q + L V + T + +V Q +
Sbjct: 145 PALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH-MVFHPNEQYAYCVNELNSSVDV 203
Query: 193 AKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGK 252
+ K + S G +A +I V+ ++
Sbjct: 204 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 263
Query: 253 LKLSLTGHV---GSVRGLTVSPRHPYLFSCG-DDRTVKCWDL 290
LS G RG V YL + G + +++
Sbjct: 264 SVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 29.0 bits (63), Expect = 1.2
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 215 ISGHLGWVRCVAVEPGNEW-FATGSADKIIKVWDLATGKLKLSLTGHVGSVRG 266
R V+ ++ A G I V+++ + L G +G
Sbjct: 271 FQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQG 323
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/186 (10%), Positives = 47/186 (25%), Gaps = 5/186 (2%)
Query: 221 WVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSCG 280
++ +A P F T I G ++ G V GL + + +
Sbjct: 29 FLENLASAPDGTIFVTNHEVGEIVSIT-PDGNQQI-HATVEGKVSGLAFTSNGDLVATGW 86
Query: 281 DDRTVKCWDLEYNKAPVQPGSMDSESGIF-SMTFDNSGSRLITTEADKTVKLYKEDDSAT 339
+ ++ L + V+ ++ +T + L + L +
Sbjct: 87 NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 146
Query: 340 EESHPVITGSHDCTIRLWDLAAGKSLC--TLTNHKKSVRSVALHPTLYMFASASPDNIKQ 397
+ + ++ A G L + P P+ +
Sbjct: 147 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE 206
Query: 398 WKCPEG 403
+
Sbjct: 207 QTNIDD 212
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 37.6 bits (87), Expect = 0.003
Identities = 28/282 (9%), Positives = 66/282 (23%), Gaps = 59/282 (20%)
Query: 212 YRVISGHLGWVRCVAVEPGNEW-FATGSADKIIKVWDLATGKLKLSLT-GHVGSVRGLTV 269
Y H + ++ F A+ + L K +V ++ GL +
Sbjct: 64 YLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRL 123
Query: 270 SP--RHPYLFSCGDDRTVKCWD---LEYNKA-----PVQPGSMDSE------SGIFSMTF 313
+ Y+F + + D + + + +MD + +
Sbjct: 124 QKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDA 183
Query: 314 DNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDC-----------------TIRL 356
D +G +T + + + + + V+ + + +
Sbjct: 184 DYTGKYATSTCYN-SERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVV 242
Query: 357 WDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNI-------KQWKCPEGKF---- 405
+ + K Y A+ K E K
Sbjct: 243 DGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRD 302
Query: 406 -------IQNLPGHNAIINSICVNNEGVLVSGADNGTMCFWD 440
+ P H + + +C W+
Sbjct: 303 TIVAEPELGLGPLHTTFDGRGN-----AYTTLFIDSQVCKWN 339
Score = 34.9 bits (80), Expect = 0.019
Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 46/213 (21%)
Query: 220 GWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYLFSC 279
R A + G K+ V + + + GL SP Y +
Sbjct: 218 NVERIAAAVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIAN 275
Query: 280 GD-DRTVKCWDLEYNKAPVQPGSMDSESGIFSMTFDNSGSRLITTEADKTVKLYKEDDSA 338
G TV ++ +D F++ T A+ + L +
Sbjct: 276 GKLSPTVSVIAID---------KLDD-------LFEDKIELRDTIVAEPELGLGPLHTTF 319
Query: 339 TEESHPVITGSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQW 398
+ T D + W N +++ + + I+Q
Sbjct: 320 DGRGNAYTTLFIDSQVCKW------------NIADAIKH---------YNGDRVNYIRQ- 357
Query: 399 KCPEGKFIQNLPGHNAIINSICVNNEG-VLVSG 430
K +Q PGHN + + +G LV
Sbjct: 358 KLD----VQYQPGHNHASLTESRDADGKWLVVL 386
Score = 28.7 bits (64), Expect = 1.7
Identities = 6/62 (9%), Positives = 15/62 (24%), Gaps = 6/62 (9%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
V + + + + I + D+ GH + + +L
Sbjct: 330 FIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQY------QPGHNHASLTESRDADGKWL 383
Query: 277 FS 278
Sbjct: 384 VV 385
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 30.0 bits (66), Expect = 0.54
Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Query: 217 GHLGWVRCVAVEPGNEWFATGSADKIIKVWDLATGKLKLSLTGHVGSVRGLTVSPRHPYL 276
G VAV N+ + + I+++D G+ G G + P +
Sbjct: 20 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDK-EGRF-KFQFGECGKRDSQLLYPNRVAV 77
Query: 277 FSCGDDRTVKCWD 289
D V
Sbjct: 78 VRNSGDIIVTERS 90
>d1bkpa_ d.117.1.1 (A:) Thymidylate synthase {Bacillus subtilis
[TaxId: 1423]}
Length = 278
Score = 29.7 bits (66), Expect = 0.73
Identities = 22/162 (13%), Positives = 43/162 (26%), Gaps = 12/162 (7%)
Query: 311 MTFDNSGSRLITTEADKTVKLYKEDDSATEESHPVITGSHDCTIRLWDLAAGKSLCTLTN 370
M FDNS ++TT K V +A +E + + + ++
Sbjct: 47 MRFDNSEVPILTT---KKVAW----KTAIKELLWIWQLKSND-VNDLNMMGVHIWDQWKQ 98
Query: 371 HKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQNLPGHNAIINSICVNNEGVLVSG 430
++ S + + + Q + N I + N L +
Sbjct: 99 EDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHI---TMLWNPDELDAM 155
Query: 431 ADNGTMCFWDWRTGYNFQRLQVRCVSGFPKPSVFFFFLAFSY 472
A + W + L+V F +
Sbjct: 156 ALTPCVYETQWYVKHGKLHLEV-RARSNDMALGNPFNVFQYN 196
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 28.5 bits (62), Expect = 2.0
Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Query: 201 PKPQWHAPWKLYRVISGHLGWVRCVAVEP-GNEWFATGSADKIIKVWDLATGKLKLSLTG 259
+ + H G + + N A + I V+ G+ K+ +
Sbjct: 207 GPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE-VFGPDGGQPKMRIRC 265
Query: 260 HVGSVRGLTVSPRHPYLF 277
L P+ +F
Sbjct: 266 PFEKPSNLHFKPQTKTIF 283
>d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 121
Score = 26.9 bits (59), Expect = 2.7
Identities = 8/68 (11%), Positives = 18/68 (26%), Gaps = 1/68 (1%)
Query: 348 GSHDCTIRLWDLAAGKSLCTLTNHKKSVRSVALHPTLYMFASASPDNIKQWKCPEGKFIQ 407
+ +R DL ++ + + +A D++ P +
Sbjct: 18 RKYFKIVRGGDLGNVEAALV-SRITAEELAKMPRLKFIQVVTAGLDHLPWESIPPHVTVA 76
Query: 408 NLPGHNAI 415
G N
Sbjct: 77 GNAGSNGY 84
>d1o59a1 b.18.1.22 (A:0-187) Allantoicase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 188
Score = 26.8 bits (59), Expect = 4.0
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 193 AKAKALPMPKPQWHAPWKLYRVISGHLGWVRCVAVEPGNEW--FATGSADKIIKVWDLAT 250
A A+ L P P + + + GW E +W G A I ++ T
Sbjct: 44 ASAENLIQPTAPIRDPTRFVHSGAWYDGWETRRHNEMEYDWVIIKMGVAAAHIIGGEIDT 103
Query: 251 GKLK 254
Sbjct: 104 AFFN 107
>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH
{Chromobacterium violaceum [TaxId: 536]}
Length = 277
Score = 26.3 bits (58), Expect = 7.0
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 449 RLQVRCVSGFPKPSVFFFFLAFSYL 473
++ V G VFF LA
Sbjct: 86 GWKIVAVPGLIPDDVFFEHLANRRF 110
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.425
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,765,428
Number of extensions: 79274
Number of successful extensions: 659
Number of sequences better than 10.0: 1
Number of HSP's gapped: 388
Number of HSP's successfully gapped: 193
Length of query: 479
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 390
Effective length of database: 1,185,626
Effective search space: 462394140
Effective search space used: 462394140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)