BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8899
(73 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UDD|A Chain A, Tankyrase-1 In Complex With Small Molecule Inhibitor
pdb|3UDD|B Chain B, Tankyrase-1 In Complex With Small Molecule Inhibitor
pdb|3UH2|A Chain A, Tankyrase-1 In Complexed With Pj34
pdb|3UH2|B Chain B, Tankyrase-1 In Complexed With Pj34
pdb|3UH4|A Chain A, Tankyrase-1 Complexed With Nvp-Xav939
pdb|3UH4|B Chain B, Tankyrase-1 Complexed With Nvp-Xav939
Length = 224
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 39/48 (81%)
Query: 11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
KSFLQF+ IKMAHAPPGHHSV+GRPS GL + EYV+YRGEQ YL
Sbjct: 155 KSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 202
>pdb|2RF5|A Chain A, Crystal Structure Of Human Tankyrase 1- Catalytic Parp
Domain
Length = 258
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 39/48 (81%)
Query: 11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
KSFLQF+ IKMAHAPPGHHSV+GRPS GL + EYV+YRGEQ YL
Sbjct: 191 KSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 238
>pdb|4DVI|A Chain A, Crystal Structure Of Tankyrase 1 With Iwr2
pdb|4DVI|B Chain B, Crystal Structure Of Tankyrase 1 With Iwr2
pdb|4I9I|A Chain A, Crystal Structure Of Tankyrase 1 With Compound 4
pdb|4I9I|B Chain B, Crystal Structure Of Tankyrase 1 With Compound 4
pdb|4I9I|C Chain C, Crystal Structure Of Tankyrase 1 With Compound 4
pdb|4I9I|D Chain D, Crystal Structure Of Tankyrase 1 With Compound 4
Length = 217
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
KSFLQF+ +KMAHAPPGHHSV+GRPS GL + EYV+YRGEQ YL
Sbjct: 155 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 202
>pdb|3KR7|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain
pdb|3KR8|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor Xav939
pdb|3KR8|C Chain C, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor Xav939
pdb|3MHJ|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
1-Methyl-3-
(Trifluoromethyl)-5h-Benzo[c][1,8]naphtyridine-6-One
pdb|3MHJ|B Chain B, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
1-Methyl-3-
(Trifluoromethyl)-5h-Benzo[c][1,8]naphtyridine-6-One
pdb|3P0N|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3P0N|C Chain C, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3P0P|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3P0P|C Chain C, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3P0Q|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3P0Q|C Chain C, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
An Inhibitor
pdb|3U9H|A Chain A, Complex Structure Of Human Tankyrase 2 With Nicotinamide
pdb|3U9H|B Chain B, Complex Structure Of Human Tankyrase 2 With Nicotinamide
pdb|3U9Y|A Chain A, Crystal Structure Of Human Tankyrase 2 Catalytic Domain In
Complex With Olaparib
pdb|3UA9|A Chain A, Crystal Structure Of Human Tankyrase 2 In Complex With A
Selective Inhibitor
pdb|3UA9|B Chain B, Crystal Structure Of Human Tankyrase 2 In Complex With A
Selective Inhibitor
pdb|4AVU|A Chain A, Crystal Structure Of Human Tankyrase 2 In Complex With
6(5h) -Phenanthridinone
pdb|4AVU|B Chain B, Crystal Structure Of Human Tankyrase 2 In Complex With
6(5h) -Phenanthridinone
pdb|4AVW|A Chain A, Crystal Structure Of Human Tankyrase 2 In Complex With
Tiq-A
pdb|4AVW|B Chain B, Crystal Structure Of Human Tankyrase 2 In Complex With
Tiq-A
Length = 240
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLR 65
KSFLQF+A+KMAH+PPGHHSV GRPS GL EYV+YRGEQ YL +R
Sbjct: 183 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMR 237
>pdb|3MHK|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With
2-(2-
Pyridyl)-7,8-Dihydro-5h-Thiino[4,3-D]pyrimidin-4-Ol
Length = 223
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLR 65
KSFLQF+A+KMAH+PPGHHSV GRPS GL EYV+YRGEQ YL +R
Sbjct: 155 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMR 209
>pdb|4HKI|C Chain C, Tankyrase 2 In Complex With Flavone
pdb|4HKI|D Chain D, Tankyrase 2 In Complex With Flavone
pdb|4HKK|B Chain B, Complex Structure Of Human Tankyrase 2 With Apigenin
pdb|4HKK|D Chain D, Complex Structure Of Human Tankyrase 2 With Apigenin
pdb|4HKN|C Chain C, Complex Structure Of Human Tankyrase 2 With Luteolin
pdb|4HL5|C Chain C, Complex Structure Of Human Tankyrase 2 With 7-Hydroxy
-4'- Methoxyflavone
pdb|4HLF|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With
7,3',4'- Trihydroxyflavone
pdb|4HLF|D Chain D, Crystal Structure Of Tankyrase 2 In Complex With
7,3',4'- Trihydroxyflavone
pdb|4HLG|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With
3'-Hydroxyflavone
pdb|4HLG|D Chain D, Crystal Structure Of Tankyrase 2 In Complex With
3'-Hydroxyflavone
pdb|4HLH|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With
4'-Fluoroflavone
pdb|4HLH|D Chain D, Crystal Structure Of Tankyrase 2 In Complex With
4'-Fluoroflavone
pdb|4HLK|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With
4'-Methylflavone
pdb|4HLK|D Chain D, Crystal Structure Of Tankyrase 2 In Complex With
4'-Methylflavone
pdb|4HLM|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With 3',4'-
Dihydroxyflavone
pdb|4HLM|D Chain D, Crystal Structure Of Tankyrase 2 In Complex With 3',4'-
Dihydroxyflavone
pdb|4HMH|C Chain C, Crystal Structure Of Tankyrase 2 In Complex With
7,3-Dihydroxyflavone
Length = 49
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 20 KMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLD 67
KMAH+PPGHHSV GRPS GL EYV+YRGEQ YL +R +
Sbjct: 1 KMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMRPE 48
>pdb|1EPX|A Chain A, Crystal Structure Analysis Of Aldolase From L. Mexicana
pdb|1EPX|B Chain B, Crystal Structure Analysis Of Aldolase From L. Mexicana
pdb|1EPX|C Chain C, Crystal Structure Analysis Of Aldolase From L. Mexicana
pdb|1EPX|D Chain D, Crystal Structure Analysis Of Aldolase From L. Mexicana
Length = 370
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 28 HHSVMGRPSSGGLYFPEYVVYRG 50
H +G+ +S G FPEY+ RG
Sbjct: 88 HDETVGQKASNGQTFPEYLTARG 110
>pdb|2QAP|A Chain A, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana
pdb|2QAP|B Chain B, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana
pdb|2QAP|C Chain C, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana
pdb|2QAP|D Chain D, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana
pdb|2QDG|A Chain A, Fructose-1,6-bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Leishmania Mexicana
pdb|2QDG|B Chain B, Fructose-1,6-bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Leishmania Mexicana
pdb|2QDG|C Chain C, Fructose-1,6-bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Leishmania Mexicana
pdb|2QDG|D Chain D, Fructose-1,6-bisphosphate Schiff Base Intermediate In Fbp
Aldolase From Leishmania Mexicana
pdb|2QDH|A Chain A, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana In Complex With Mannitol-1,6-Bisphosphate, A
Competitive Inhibitor
pdb|2QDH|B Chain B, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana In Complex With Mannitol-1,6-Bisphosphate, A
Competitive Inhibitor
pdb|2QDH|C Chain C, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana In Complex With Mannitol-1,6-Bisphosphate, A
Competitive Inhibitor
pdb|2QDH|D Chain D, Fructose-1,6-Bisphosphate Aldolase From Leishmania
Mexicana In Complex With Mannitol-1,6-Bisphosphate, A
Competitive Inhibitor
Length = 391
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 28 HHSVMGRPSSGGLYFPEYVVYRG 50
H +G+ +S G FPEY+ RG
Sbjct: 108 HDETVGQKASNGQTFPEYLTARG 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,346,028
Number of Sequences: 62578
Number of extensions: 81899
Number of successful extensions: 174
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 8
length of query: 73
length of database: 14,973,337
effective HSP length: 43
effective length of query: 30
effective length of database: 12,282,483
effective search space: 368474490
effective search space used: 368474490
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 45 (21.9 bits)