Query psy89
Match_columns 119
No_of_seqs 111 out of 1079
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 22:19:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy89.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/89hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r0j_A Ubiquitin carrier prote 100.0 7.2E-42 2.5E-46 234.5 11.3 112 5-118 16-127 (149)
2 2ayv_A Ubiquitin-conjugating e 100.0 1.2E-41 4.1E-46 237.1 12.0 113 4-118 35-147 (166)
3 4gpr_A Ubiquitin-conjugating e 100.0 1.3E-41 4.4E-46 233.7 11.9 113 4-118 18-130 (151)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.4E-41 4.7E-46 237.5 12.0 112 5-118 19-130 (169)
5 2c2v_B Ubiquitin-conjugating e 100.0 6.5E-42 2.2E-46 235.9 9.7 112 5-118 20-131 (154)
6 1z2u_A Ubiquitin-conjugating e 100.0 2.4E-41 8.2E-46 232.1 11.9 113 4-118 18-130 (150)
7 2c4o_A Ubiquitin-conjugating e 100.0 2.9E-41 1E-45 235.0 12.2 113 4-118 33-145 (165)
8 2aak_A UBC1, ubiquitin conjuga 100.0 2.8E-41 9.6E-46 232.2 11.9 113 4-118 18-130 (152)
9 2e2c_A Ubiquitin conjugating e 100.0 3.1E-41 1.1E-45 232.9 11.9 109 8-118 27-135 (156)
10 1yh2_A HSPC150 protein similar 100.0 3.3E-41 1.1E-45 235.5 12.0 114 5-118 19-134 (169)
11 3rcz_B SUMO-conjugating enzyme 100.0 3.4E-41 1.1E-45 234.3 11.9 115 4-118 24-143 (163)
12 1zdn_A Ubiquitin-conjugating e 100.0 1.5E-41 5.1E-46 235.0 9.9 112 5-118 28-139 (158)
13 3h8k_A Ubiquitin-conjugating e 100.0 4.9E-41 1.7E-45 233.5 11.9 111 8-118 19-143 (164)
14 1i7k_A Ubiquitin-conjugating e 100.0 3.9E-41 1.3E-45 237.0 11.4 111 6-118 46-156 (179)
15 1fxt_A Ubiquitin-conjugating e 100.0 2.2E-41 7.4E-46 232.1 9.6 112 5-118 16-129 (149)
16 2ucz_A UBC7, ubiquitin conjuga 100.0 4.7E-41 1.6E-45 233.8 11.2 111 8-118 20-144 (165)
17 1jat_A Ubiquitin-conjugating e 100.0 3.3E-41 1.1E-45 232.6 10.1 113 4-118 19-131 (155)
18 3rz3_A Ubiquitin-conjugating e 100.0 9.9E-41 3.4E-45 235.7 11.9 111 8-118 25-147 (183)
19 1yrv_A Ubiquitin-conjugating l 100.0 3.2E-41 1.1E-45 235.6 9.2 114 5-118 38-152 (169)
20 2awf_A Ubiquitin-conjugating e 100.0 8.8E-41 3E-45 233.9 10.7 111 8-118 33-157 (172)
21 2gjd_A Ubiquitin-conjugating e 100.0 1.8E-40 6.3E-45 229.3 11.4 102 17-118 36-137 (157)
22 3bzh_A Ubiquitin-conjugating e 100.0 3.2E-40 1.1E-44 234.9 12.0 112 5-118 63-174 (194)
23 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.3E-40 1.1E-44 234.6 11.5 109 8-118 63-172 (193)
24 2bep_A Ubiquitin-conjugating e 100.0 9.4E-40 3.2E-44 226.1 13.0 109 8-118 29-138 (159)
25 2grr_A Ubiquitin-conjugating e 100.0 4.2E-40 1.4E-44 228.3 11.2 102 17-118 39-140 (161)
26 2pwq_A Ubiquitin conjugating e 100.0 1.4E-40 4.8E-45 240.0 8.9 112 5-118 38-150 (216)
27 1c4z_D UBCH7, ubiquitin conjug 100.0 1.7E-39 5.8E-44 223.7 12.7 109 8-118 18-129 (154)
28 1y8x_A Ubiquitin-conjugating e 100.0 1.6E-39 5.6E-44 225.2 12.5 107 9-118 21-130 (160)
29 1wzv_A Ubiquitin-conjugating e 100.0 7E-40 2.4E-44 225.9 10.1 111 6-118 20-131 (155)
30 3k9o_A Ubiquitin-conjugating e 100.0 3.1E-39 1.1E-43 230.9 13.2 108 9-118 27-135 (201)
31 2onu_A Ubiquitin-conjugating e 100.0 2.1E-40 7.1E-45 228.0 6.7 109 8-118 17-127 (152)
32 2nvu_C NEDD8-conjugating enzym 100.0 3.6E-39 1.2E-43 227.2 11.6 108 8-118 40-150 (180)
33 2y9m_A Ubiquitin-conjugating e 100.0 6.7E-39 2.3E-43 224.4 12.2 103 15-118 43-147 (172)
34 3fn1_B NEDD8-conjugating enzym 100.0 3.7E-39 1.3E-43 224.7 10.7 110 8-118 30-147 (167)
35 1tte_A Ubiquitin-conjugating e 100.0 9.1E-40 3.1E-44 235.6 6.8 109 8-118 18-130 (215)
36 2q0v_A Ubiquitin-conjugating e 100.0 3.9E-39 1.3E-43 222.5 8.3 98 18-118 53-153 (156)
37 3e46_A Ubiquitin-conjugating e 100.0 3.6E-38 1.2E-42 231.9 13.2 109 8-118 78-187 (253)
38 1yf9_A Ubiquitin carrier prote 100.0 4E-39 1.4E-43 225.4 6.9 107 9-118 28-136 (171)
39 2z5d_A Ubiquitin-conjugating e 100.0 1.9E-39 6.6E-44 228.3 4.8 108 8-118 40-149 (179)
40 1jat_B Ubiquitin-conjugating e 100.0 4.2E-39 1.4E-43 218.3 5.1 98 18-118 38-138 (138)
41 2a4d_A Ubiquitin-conjugating e 100.0 5.2E-38 1.8E-42 217.5 9.7 106 11-116 47-157 (160)
42 3o2u_A NEDD8-conjugating enzym 100.0 1.5E-37 5.2E-42 220.5 12.1 102 14-118 55-159 (190)
43 2fo3_A Ubiquitin-conjugating e 100.0 1.9E-37 6.5E-42 207.0 10.5 101 5-107 21-122 (125)
44 4ddg_A Ubiquitin-conjugating e 100.0 2E-37 6.9E-42 240.6 11.7 113 4-118 17-129 (399)
45 2h2y_A Ubiquitin-conjugating e 100.0 9.6E-37 3.3E-41 206.3 11.0 99 6-106 36-135 (136)
46 2hlw_A Ubiquitin-conjugating e 100.0 1.4E-37 4.7E-42 217.3 6.5 104 12-115 58-166 (170)
47 4ds2_A Ubiquitin-conjugating e 100.0 4E-37 1.4E-41 214.4 7.9 109 8-118 38-151 (167)
48 2a7l_A Hypothetical ubiquitin- 100.0 1.8E-35 6.3E-40 200.0 9.9 87 14-102 48-136 (136)
49 3ceg_A Baculoviral IAP repeat- 100.0 1.5E-33 5.1E-38 212.9 9.5 103 12-114 102-217 (323)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.3E-32 7.7E-37 193.5 10.5 103 5-109 29-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 9.2E-33 3.1E-37 195.3 4.4 98 9-107 49-159 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.2E-24 1.1E-28 147.8 1.8 82 14-95 50-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 6.2E-21 2.1E-25 131.8 8.1 96 10-108 51-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 5.1E-17 1.7E-21 110.0 0.6 68 15-87 53-131 (168)
55 3obq_A Tumor susceptibility ge 99.6 2.7E-15 9.2E-20 102.0 5.8 79 17-103 51-138 (146)
56 2ebm_A RWD domain-containing p 95.4 0.045 1.5E-06 35.2 5.9 41 20-60 38-78 (128)
57 2day_A Ring finger protein 25; 93.9 0.2 6.7E-06 32.1 6.2 24 37-60 59-82 (128)
58 2yz0_A Serine/threonine-protei 93.7 0.25 8.5E-06 32.0 6.4 41 19-60 45-85 (138)
59 2ebk_A RWD domain-containing p 92.6 0.33 1.1E-05 31.0 5.8 41 19-60 39-79 (128)
60 3zqs_A E3 ubiquitin-protein li 92.3 0.57 2E-05 32.5 6.9 64 17-101 23-86 (186)
61 2dax_A Protein C21ORF6; RWD do 91.1 0.21 7.1E-06 33.1 3.5 24 38-61 74-97 (152)
62 2daw_A RWD domain containing p 91.1 0.25 8.4E-06 33.0 3.9 24 38-61 76-99 (154)
63 1ukx_A GCN2, GCN2 EIF2alpha ki 90.8 0.14 4.7E-06 33.1 2.4 23 37-59 63-85 (137)
64 2bum_A Protocatechuate 3,4-dio 38.9 29 0.001 24.1 3.4 25 35-59 109-138 (209)
65 3rls_A YAF9, protein AF-9 homo 28.3 1.4E+02 0.0048 20.2 6.0 42 17-60 30-71 (175)
66 1f08_A Replication protein E1; 24.6 14 0.00049 24.5 -0.2 82 19-119 34-122 (148)
67 1r9w_A Replication protein E1; 24.4 12 0.00041 24.8 -0.6 82 19-119 31-119 (145)
68 3pft_A Flavin reductase; desul 22.3 40 0.0014 21.8 1.7 30 51-80 42-74 (157)
69 3qrl_A Transcription initiatio 21.7 1.7E+02 0.0059 19.0 5.7 42 18-61 31-75 (140)
70 3t63_M 3,4-PCD, protocatechuat 21.2 50 0.0017 23.5 2.1 24 36-59 134-164 (238)
71 3t63_A 3,4-PCD, protocatechuat 21.0 63 0.0022 22.3 2.5 23 37-59 102-129 (200)
72 2bum_B Protocatechuate 3,4-dio 20.8 51 0.0017 23.4 2.1 24 36-59 135-165 (241)
73 2ccv_A Helix pomatia agglutini 20.0 1.5E+02 0.0053 17.8 4.0 22 37-59 29-50 (101)
No 1
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=7.2e-42 Score=234.53 Aligned_cols=112 Identities=30% Similarity=0.618 Sum_probs=104.3
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
.+...+.+.++++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.|+|+||||+.+|+||+++|. ++|
T Consensus 16 ~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~--~~W 93 (149)
T 2r0j_A 16 EPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILK--DKW 93 (149)
T ss_dssp SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGT--TTC
T ss_pred CCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcC--CCC
Confidence 334445555677899999999999999999999999999999999999999999999999999999999999998 499
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|.+||.+|+++|.+|++++|+|.+||++|
T Consensus 94 ~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 127 (149)
T 2r0j_A 94 SPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHF 127 (149)
T ss_dssp CTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 9999999999999999999999999999999876
No 2
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-41 Score=237.15 Aligned_cols=113 Identities=31% Similarity=0.673 Sum_probs=104.7
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.++++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|. ++
T Consensus 35 ~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~--~~ 112 (166)
T 2ayv_A 35 KDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILK--DQ 112 (166)
T ss_dssp HSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGT--TT
T ss_pred hCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEccccc--cc
Confidence 3344455555667899999999999999999999999999999999999999999999999999999999999998 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 113 WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~ 147 (166)
T 2ayv_A 113 WSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLY 147 (166)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHH
Confidence 99999999999999999999999999999999876
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-41 Score=233.71 Aligned_cols=113 Identities=28% Similarity=0.606 Sum_probs=104.7
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+++...+.+.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|+||||+++|+||+++|. ++
T Consensus 18 ~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~--~~ 95 (151)
T 4gpr_A 18 QDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILK--DQ 95 (151)
T ss_dssp HSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGT--TT
T ss_pred hCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEccccc--CC
Confidence 3344445555667899999999999999999999999999999999999999999999999999999999999998 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 96 W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (151)
T 4gpr_A 96 WSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVL 130 (151)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHH
Confidence 99999999999999999999999999999999886
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-41 Score=237.46 Aligned_cols=112 Identities=34% Similarity=0.699 Sum_probs=104.1
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
.+..++.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+||||||+.+|+||+++|.. .|
T Consensus 19 ~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~--~W 96 (169)
T 1ayz_A 19 DAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN--RW 96 (169)
T ss_dssp SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT--TC
T ss_pred CCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhcc--CC
Confidence 3344455556678999999999999999999999999999999999999999999999999999999999999984 89
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 97 sP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~ 130 (169)
T 1ayz_A 97 TPTYDVASILTSIQSLFNDPNPASPANVEAATLF 130 (169)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999876
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-42 Score=235.89 Aligned_cols=112 Identities=29% Similarity=0.639 Sum_probs=102.1
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
.+...+.+.+.++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|+|+|+||||+++|+||+++|. ++|
T Consensus 20 ~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~--~~W 97 (154)
T 2c2v_B 20 EPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILK--DKW 97 (154)
T ss_dssp SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHH--TSC
T ss_pred CCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhcc--CCC
Confidence 334445555667899999999999999999999999999999999999999999999999999999999999997 499
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 98 ~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~ 131 (154)
T 2c2v_B 98 SPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW 131 (154)
T ss_dssp CTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999999999999999999999999999999986
No 6
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.4e-41 Score=232.10 Aligned_cols=113 Identities=32% Similarity=0.653 Sum_probs=104.5
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|+||||+.+|+||+++|. ++
T Consensus 18 ~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~--~~ 95 (150)
T 1z2u_A 18 RDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQ 95 (150)
T ss_dssp HSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGT--TT
T ss_pred hCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeecccc--CC
Confidence 3334445555667899999999999999999999999999999999999999999999999999999999999998 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|++++.+||.+|+++|.+|++++|+|.+||++|
T Consensus 96 W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~ 130 (150)
T 1z2u_A 96 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 130 (150)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHH
Confidence 99999999999999999999999999999999876
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.9e-41 Score=235.00 Aligned_cols=113 Identities=32% Similarity=0.661 Sum_probs=104.3
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.+.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|.|+|+||||+++|+||+++|. ++
T Consensus 33 ~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~--~~ 110 (165)
T 2c4o_A 33 RDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQ 110 (165)
T ss_dssp SSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGT--TT
T ss_pred hCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhc--CC
Confidence 3334444555667899999999999999999999999999999999999999999999999999999999999998 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 111 W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~ 145 (165)
T 2c4o_A 111 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 145 (165)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 99999999999999999999999999999999876
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.8e-41 Score=232.22 Aligned_cols=113 Identities=35% Similarity=0.732 Sum_probs=104.4
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|+||||+.+|+||+++|.. +
T Consensus 18 ~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~ 95 (152)
T 2aak_A 18 QDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--Q 95 (152)
T ss_dssp HSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT--S
T ss_pred hCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcC--C
Confidence 33344444556678999999999999999999999999999999999999999999999999999999999999984 8
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|++++.+||.+|+++|.+|++++|+|.+||++|
T Consensus 96 W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (152)
T 2aak_A 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY 130 (152)
T ss_dssp CCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 99999999999999999999999999999999876
No 9
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-41 Score=232.92 Aligned_cols=109 Identities=36% Similarity=0.655 Sum_probs=102.3
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCCCc
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWKPA 87 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~p~ 87 (119)
..+.+.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+++||||+.+|+||+++|.. +|+|+
T Consensus 27 ~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~ 104 (156)
T 2e2c_A 27 PGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKE--NWTAS 104 (156)
T ss_dssp TTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TCCTT
T ss_pred CCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccc--cCCCC
Confidence 3344445677999999999999999999999999999999999999999999999999999999999999984 89999
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 88 ITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 88 ~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+++.+||++|+++|.+|++++|+|.+||++|
T Consensus 105 ~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~ 135 (156)
T 2e2c_A 105 YDVRTILLSLQSLLGEPNNASPLNAQAADMW 135 (156)
T ss_dssp CCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT
T ss_pred CcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999986
No 10
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-41 Score=235.48 Aligned_cols=114 Identities=31% Similarity=0.619 Sum_probs=104.3
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC--CC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE--EK 82 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~--~~ 82 (119)
.+...+.+.+.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|.. .+
T Consensus 19 ~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~ 98 (169)
T 1yh2_A 19 EPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKG 98 (169)
T ss_dssp SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTS
T ss_pred CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCccc
Confidence 3334444556678999999999999999999999999999999999999999999999999999999999999972 14
Q ss_pred CCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 83 DWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 83 ~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 99 ~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~ 134 (169)
T 1yh2_A 99 AWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEF 134 (169)
T ss_dssp CCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHH
Confidence 899999999999999999999999999999999876
No 11
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-41 Score=234.29 Aligned_cols=115 Identities=57% Similarity=1.042 Sum_probs=104.6
Q ss_pred ccCCCcccEEeeCC-----CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCC
Q psy89 4 QTQNHHLGLRIGYG-----HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 78 (119)
Q Consensus 4 ~~~~~~~~v~~~~~-----~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l 78 (119)
+++..++.+.+.++ |+++|+++|.||+|||||||+|+++|.||++||++||+|+|+|+||||||+++|+||+++|
T Consensus 24 ~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL 103 (163)
T 3rcz_B 24 RDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSIL 103 (163)
T ss_dssp HSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGG
T ss_pred hCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEecccc
Confidence 34444454555544 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 79 DEEKDWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 79 ~~~~~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
...+.|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 104 ~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~ 143 (163)
T 3rcz_B 104 NEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMF 143 (163)
T ss_dssp CTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred CCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 8644699999999999999999999999999999999987
No 12
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-41 Score=234.95 Aligned_cols=112 Identities=27% Similarity=0.574 Sum_probs=104.0
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
.+...+.+.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|.. +|
T Consensus 28 ~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W 105 (158)
T 1zdn_A 28 DPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKR--DW 105 (158)
T ss_dssp SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTT--TC
T ss_pred CCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCC--CC
Confidence 3344445556678999999999999999999999999999999999999999999999999999999999999984 99
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|++++.+||++|+++|.+|++++|+|.+||++|
T Consensus 106 ~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~ 139 (158)
T 1zdn_A 106 TAELGIRHVLLTIKCLLIHPNPESALNEEAGRLL 139 (158)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999999999999999999999999999999986
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=4.9e-41 Score=233.51 Aligned_cols=111 Identities=32% Similarity=0.626 Sum_probs=102.0
Q ss_pred CcccEE--eeCC-CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC----
Q psy89 8 HHLGLR--IGYG-HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE---- 80 (119)
Q Consensus 8 ~~~~v~--~~~~-~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~---- 80 (119)
++.||. ...+ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|..
T Consensus 19 ~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~ 98 (164)
T 3h8k_A 19 PPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDD 98 (164)
T ss_dssp CCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSC
T ss_pred CCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccc
Confidence 344554 4444 899999999999999999999999999999999999999999999999999999999999962
Q ss_pred -------CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 81 -------EKDWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 81 -------~~~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
.++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 99 ~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~ 143 (164)
T 3h8k_A 99 PMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMW 143 (164)
T ss_dssp CCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred cccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHH
Confidence 15899999999999999999999999999999999987
No 14
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-41 Score=236.97 Aligned_cols=111 Identities=30% Similarity=0.545 Sum_probs=103.7
Q ss_pred CCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCC
Q psy89 6 QNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWK 85 (119)
Q Consensus 6 ~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~ 85 (119)
+...+.+.++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+||||||+.+|+||+++|. +.|+
T Consensus 46 ~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~--~~Ws 123 (179)
T 1i7k_A 46 GDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILK--EKWS 123 (179)
T ss_dssp CCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGT--TTCC
T ss_pred CCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCc--CcCC
Confidence 33444455667899999999999999999999999999999999999999999999999999999999999997 4899
Q ss_pred CcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 86 PAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 86 p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 124 P~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~ 156 (179)
T 1i7k_A 124 ALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156 (179)
T ss_dssp TTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh
Confidence 999999999999999999999999999999986
No 15
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.2e-41 Score=232.10 Aligned_cols=112 Identities=32% Similarity=0.671 Sum_probs=103.2
Q ss_pred cCCCcccEEeeCC-CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccC-CCeEEccCCCCCC
Q psy89 5 TQNHHLGLRIGYG-HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEK 82 (119)
Q Consensus 5 ~~~~~~~v~~~~~-~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~ 82 (119)
.+...+.+.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|+|+|+||||+. +|+||+++|..
T Consensus 16 ~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~-- 93 (149)
T 1fxt_A 16 DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKN-- 93 (149)
T ss_dssp CGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHT--
T ss_pred CCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCC--
Confidence 3334445555566 8999999999999999999999999999999999999999999999999998 99999999974
Q ss_pred CCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 83 DWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 83 ~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+|++++.+||++|+++|.+|++++|+|.+||++|
T Consensus 94 ~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 129 (149)
T 1fxt_A 94 AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 129 (149)
T ss_dssp SCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 899999999999999999999999999999999876
No 16
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-41 Score=233.85 Aligned_cols=111 Identities=34% Similarity=0.793 Sum_probs=101.8
Q ss_pred CcccEEe--e-CCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC----
Q psy89 8 HHLGLRI--G-YGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE---- 80 (119)
Q Consensus 8 ~~~~v~~--~-~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~---- 80 (119)
++.||.+ . ++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+|+||||+++|+||+++|..
T Consensus 20 ~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~ 99 (165)
T 2ucz_A 20 SPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDD 99 (165)
T ss_dssp CCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSC
T ss_pred CCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCcccc
Confidence 3445554 3 36999999999999999999999999999999999999999999999999999999999999941
Q ss_pred -------CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 81 -------EKDWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 81 -------~~~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
.++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 100 ~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 144 (165)
T 2ucz_A 100 PNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILW 144 (165)
T ss_dssp TTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHH
T ss_pred ccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 26899999999999999999999999999999999876
No 17
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=3.3e-41 Score=232.57 Aligned_cols=113 Identities=29% Similarity=0.603 Sum_probs=104.7
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|. ++
T Consensus 19 ~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~--~~ 96 (155)
T 1jat_A 19 SDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLK--TN 96 (155)
T ss_dssp HSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGT--TT
T ss_pred hCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhc--cC
Confidence 3344455555667899999999999999999999999999999999999999999999999999999999999997 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 97 W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1jat_A 97 WSPALQIRTVLLSIQALLASPNPNDPLANDVAEDW 131 (155)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999999876
No 18
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=9.9e-41 Score=235.68 Aligned_cols=111 Identities=36% Similarity=0.739 Sum_probs=101.1
Q ss_pred CcccEE-eeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC------
Q psy89 8 HHLGLR-IGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE------ 80 (119)
Q Consensus 8 ~~~~v~-~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~------ 80 (119)
..+.+. ++++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|+|+||||||+++|+||+++|..
T Consensus 25 ~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~ 104 (183)
T 3rz3_A 25 EGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQ 104 (183)
T ss_dssp TTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------
T ss_pred CCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCccccccc
Confidence 334444 3467999999999999999999999999999999999999999999999999999999999999962
Q ss_pred -----CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 81 -----EKDWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 81 -----~~~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
.++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 105 ~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 147 (183)
T 3rz3_A 105 SGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 147 (183)
T ss_dssp ------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred ccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 25899999999999999999999999999999999987
No 19
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-41 Score=235.58 Aligned_cols=114 Identities=26% Similarity=0.502 Sum_probs=104.6
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccc-cCCCeEEccCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKD 83 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV-~~~G~vcl~~l~~~~~ 83 (119)
.+...+.+...++|+++|+++|.||++||||||+|+++|.||++||++||+|+|+|+|||||| +.+|+||+++|...++
T Consensus 38 ~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~ 117 (169)
T 1yrv_A 38 NNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEK 117 (169)
T ss_dssp HCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGG
T ss_pred CCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcC
Confidence 344455555667899999999999999999999999999999999999999999999999999 7899999999972248
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 118 WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~ 152 (169)
T 1yrv_A 118 WNTNYTLSSILLALQVMLSNPVLENPVNLEAARIL 152 (169)
T ss_dssp CCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 99999999999999999999999999999999986
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=8.8e-41 Score=233.93 Aligned_cols=111 Identities=33% Similarity=0.623 Sum_probs=88.7
Q ss_pred CcccEEe--eC-CCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC----
Q psy89 8 HHLGLRI--GY-GHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE---- 80 (119)
Q Consensus 8 ~~~~v~~--~~-~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~---- 80 (119)
++.||.+ .. +|+++|+++|.||++||||||+|+++|.||++||++||+|+|+|+|+||||+++|+||+++|..
T Consensus 33 ~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d 112 (172)
T 2awf_A 33 PVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGED 112 (172)
T ss_dssp CCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---
T ss_pred CCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccc
Confidence 3445554 33 6999999999999999999999999999999999999999999999999999999999999962
Q ss_pred -------CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 81 -------EKDWKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 81 -------~~~W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
.++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 113 ~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~ 157 (172)
T 2awf_A 113 KYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEW 157 (172)
T ss_dssp ------CTTSCCTTCCHHHHHHHHHHHHSCC--------------
T ss_pred cccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHH
Confidence 25899999999999999999999999999999999986
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.8e-40 Score=229.29 Aligned_cols=102 Identities=47% Similarity=0.941 Sum_probs=98.0
Q ss_pred CCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCCCcCCHHHHHHH
Q psy89 17 GHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWKPAITIKQILLG 96 (119)
Q Consensus 17 ~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~p~~~l~~vl~~ 96 (119)
+|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|+||||+.+|+||+++|...++|+|+++|++||++
T Consensus 36 ~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~ 115 (157)
T 2gjd_A 36 MDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLG 115 (157)
T ss_dssp EEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHH
T ss_pred CcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999853479999999999999
Q ss_pred HHHHhcCCCCCCCcCHHHHhhc
Q psy89 97 IQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 97 i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+++|.+|+.++|+|.+||++|
T Consensus 116 i~~ll~~p~~~~p~n~~aa~~~ 137 (157)
T 2gjd_A 116 VQDLLDSPNPNSPAQEPAWRSF 137 (157)
T ss_dssp HHHHHTSCCTTCCCCHHHHHHH
T ss_pred HHHHHhCCCCCCccCHHHHHHH
Confidence 9999999999999999999876
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.2e-40 Score=234.90 Aligned_cols=112 Identities=30% Similarity=0.585 Sum_probs=104.2
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
.+...+.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+||||||+.+|+||+++|.. +|
T Consensus 63 ~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~--~W 140 (194)
T 3bzh_A 63 DPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKD--NW 140 (194)
T ss_dssp SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TC
T ss_pred CCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhc--cC
Confidence 3334455556678999999999999999999999999999999999999999999999999999999999999974 99
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 141 sP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~ 174 (194)
T 3bzh_A 141 SPALTISKVLLSICSLLTDCNPADPLVGSIATQY 174 (194)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHH
Confidence 9999999999999999999999999999999886
No 23
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-40 Score=234.61 Aligned_cols=109 Identities=37% Similarity=0.713 Sum_probs=102.0
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p 86 (119)
..+.+.+.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|+|+||||||+ .+|+||+++|.. +|+|
T Consensus 63 ~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP 140 (193)
T 2f4z_A 63 HGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKH--EWSP 140 (193)
T ss_dssp -CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCT
T ss_pred CcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccc--cCCC
Confidence 3445556678999999999999999999999999999999999999999999999999999 589999999984 8999
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 87 AITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 87 ~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 141 ~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~ 172 (193)
T 2f4z_A 141 ALTIRTALLSIQAMLADPVPTDPQDAEVAKMM 172 (193)
T ss_dssp TSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999987
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=9.4e-40 Score=226.10 Aligned_cols=109 Identities=30% Similarity=0.662 Sum_probs=102.5
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p 86 (119)
..+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|+||||+ .+|+||+++|.. +|+|
T Consensus 29 ~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~--~W~p 106 (159)
T 2bep_A 29 NQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD--QWAA 106 (159)
T ss_dssp TSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCT
T ss_pred CCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhc--cCCC
Confidence 4455556678999999999999999999999999999999999999999999999999999 499999999984 8999
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 87 AITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 87 ~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++++.+||++|+++|.+|++++|+|.+||++|
T Consensus 107 ~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 138 (159)
T 2bep_A 107 AMTLRTVLLSLQALLAAAEPDDPQDAVVANQY 138 (159)
T ss_dssp TCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999986
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.2e-40 Score=228.33 Aligned_cols=102 Identities=75% Similarity=1.330 Sum_probs=98.3
Q ss_pred CCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCCCcCCHHHHHHH
Q psy89 17 GHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWKPAITIKQILLG 96 (119)
Q Consensus 17 ~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~p~~~l~~vl~~ 96 (119)
+|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|...++|+|+++|.+||++
T Consensus 39 ~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~ 118 (161)
T 2grr_A 39 MNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLG 118 (161)
T ss_dssp EEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHH
T ss_pred CCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999853479999999999999
Q ss_pred HHHHhcCCCCCCCcCHHHHhhc
Q psy89 97 IQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 97 i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+++|.+|+.++|+|.+||++|
T Consensus 119 i~~ll~~p~~~~p~n~~aa~~~ 140 (161)
T 2grr_A 119 IQELLNEPNIQSPAQAEAYTIY 140 (161)
T ss_dssp HHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHhCCCCCCccCHHHHHHH
Confidence 9999999999999999999987
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.4e-40 Score=240.04 Aligned_cols=112 Identities=36% Similarity=0.724 Sum_probs=103.6
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKD 83 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~ 83 (119)
.+...+.+.+.++|+++|+++|.||+|||||||+|+++|.||++||++||+|+|.|+||||||+ .+|+||+++|.. +
T Consensus 38 ~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~ 115 (216)
T 2pwq_A 38 ENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKN--E 115 (216)
T ss_dssp SCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHH--H
T ss_pred CCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcc--c
Confidence 3344555556678999999999999999999999999999999999999999999999999999 589999999984 8
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 116 WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~ 150 (216)
T 2pwq_A 116 WSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMY 150 (216)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999999876
No 27
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.7e-39 Score=223.74 Aligned_cols=109 Identities=28% Similarity=0.647 Sum_probs=100.9
Q ss_pred CcccEE---eeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 8 HHLGLR---IGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 8 ~~~~v~---~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
++.|+. ++++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.|+|+||||+++|+||+++|.. ++|
T Consensus 18 ~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-~~W 95 (154)
T 1c4z_D 18 GMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISA-ENW 95 (154)
T ss_dssp CCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSS-SSC
T ss_pred CCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCC-CCC
Confidence 334554 35678999999998 9999999999999999999999999999999999999999999999999964 589
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|++++.+||++|+++|.+|++++|+|.+||++|
T Consensus 96 ~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 129 (154)
T 1c4z_D 96 KPATKTDQVIQSLIALVNDPQPEHPLRADLAEEY 129 (154)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 9999999999999999999999999999999876
No 28
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-39 Score=225.16 Aligned_cols=107 Identities=34% Similarity=0.600 Sum_probs=100.3
Q ss_pred cccEEe---eCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCC
Q psy89 9 HLGLRI---GYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWK 85 (119)
Q Consensus 9 ~~~v~~---~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~ 85 (119)
+.|+.+ +++|+++|+++| ||++||||||.|+++|.||++||++||+|+|+|+|+||||+.+|+||+++|. ++|+
T Consensus 21 ~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~--~~W~ 97 (160)
T 1y8x_A 21 PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR--EDWK 97 (160)
T ss_dssp CTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGT--TTCC
T ss_pred CCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccch--hhcc
Confidence 445554 467999999988 9999999999999999999999999999999999999999999999999998 4999
Q ss_pred CcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 86 PAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 86 p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|++++.+||++|+++|.+|++++|+|.+||++|
T Consensus 98 p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~ 130 (160)
T 1y8x_A 98 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL 130 (160)
T ss_dssp TTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999999999999999999999999999999886
No 29
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=7e-40 Score=225.88 Aligned_cols=111 Identities=27% Similarity=0.571 Sum_probs=101.9
Q ss_pred CCCcccE-EeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 6 QNHHLGL-RIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 6 ~~~~~~v-~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
+...+.+ .++++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.|+++||||+.+|+||+++|.. ++|
T Consensus 20 ~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~-~~W 97 (155)
T 1wzv_A 20 PPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISS-ENW 97 (155)
T ss_dssp CCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCT-TTC
T ss_pred CCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCc-cCC
Confidence 3344444 456779999999999 9999999999999999999999999999999999999999999999999942 599
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|.+||.+|+++|.+|++++|+|.+||++|
T Consensus 98 ~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1wzv_A 98 KPCTKTCQVLEALNVLVNRPNIREPLRMDLADLL 131 (155)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 9999999999999999999999999999999876
No 30
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.1e-39 Score=230.89 Aligned_cols=108 Identities=31% Similarity=0.664 Sum_probs=101.8
Q ss_pred cccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccC-CCeEEccCCCCCCCCCCc
Q psy89 9 HLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWKPA 87 (119)
Q Consensus 9 ~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~W~p~ 87 (119)
.+.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+. +|+||+++|. ++|+|+
T Consensus 27 ~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~--~~W~p~ 104 (201)
T 3k9o_A 27 QIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILK--DQWAAA 104 (201)
T ss_dssp SEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGT--TTCCTT
T ss_pred CEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCcccc--cCCCCC
Confidence 4445566779999999999999999999999999999999999999999999999999994 9999999997 499999
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 88 ITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 88 ~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 105 ~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~ 135 (201)
T 3k9o_A 105 MTLRTVLLSLQALLAAAEPDDPQDAVVANQY 135 (201)
T ss_dssp CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCCcccHHHHHHH
Confidence 9999999999999999999999999999886
No 31
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.1e-40 Score=228.00 Aligned_cols=109 Identities=30% Similarity=0.610 Sum_probs=102.8
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccC-CCeEEccCCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~W~p 86 (119)
.++.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+|+||||+. +|+||+++|.. .|+|
T Consensus 17 ~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~--~W~p 94 (152)
T 2onu_A 17 AGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQ--TWTP 94 (152)
T ss_dssp HTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHH--HCCT
T ss_pred CCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccc--cCCC
Confidence 35667778889999999999999999999999999999999999999999999999999994 89999999974 8999
Q ss_pred cCCHHHHHHH-HHHHhcCCCCCCCcCHHHHhhc
Q psy89 87 AITIKQILLG-IQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 87 ~~~l~~vl~~-i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++++.+||++ |+++|.+|++++|+|.+||++|
T Consensus 95 ~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~ 127 (152)
T 2onu_A 95 LYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLL 127 (152)
T ss_dssp TCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999999999 6899999999999999999876
No 32
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-39 Score=227.17 Aligned_cols=108 Identities=32% Similarity=0.555 Sum_probs=100.8
Q ss_pred CcccEEe---eCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCC
Q psy89 8 HHLGLRI---GYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 8 ~~~~v~~---~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W 84 (119)
++.|+.+ +++|+++|+++| ||++||||||.|+++|.||++||++||+|+|.|+|+||||+.+|+||+++|. ++|
T Consensus 40 ~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~--~~W 116 (180)
T 2nvu_C 40 LPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILR--EDW 116 (180)
T ss_dssp CCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGT--TSC
T ss_pred CCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEccccc--ccC
Confidence 3445554 467999999998 9999999999999999999999999999999999999999999999999998 499
Q ss_pred CCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 85 KPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+|+++|++||.+|+++|.+|++++|+|.+||++|
T Consensus 117 ~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 150 (180)
T 2nvu_C 117 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL 150 (180)
T ss_dssp CTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 9999999999999999999999999999999876
No 33
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=6.7e-39 Score=224.39 Aligned_cols=103 Identities=24% Similarity=0.510 Sum_probs=98.9
Q ss_pred eCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcC-Cccccccc-CCCeEEccCCCCCCCCCCcCCHHH
Q psy89 15 GYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEP-PLFHPNVY-PSGTVCLSLLDEEKDWKPAITIKQ 92 (119)
Q Consensus 15 ~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t-~i~HpnV~-~~G~vcl~~l~~~~~W~p~~~l~~ 92 (119)
+++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|+| +||||||+ .+|+||+++|.. ++|+|+++|.+
T Consensus 43 ~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~-~~W~p~~~i~~ 121 (172)
T 2y9m_A 43 DETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKP-EEWTPVWDLLH 121 (172)
T ss_dssp STTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGST-TTCCTTCCHHH
T ss_pred CCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCC-CCCCCcCcHHH
Confidence 5679999999999999999999999999999999999999999999 99999996 799999999973 48999999999
Q ss_pred HHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 93 ILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 93 vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
||++|+++|.+|++++|+|.+||++|
T Consensus 122 vL~si~~ll~~p~~~~p~n~~aa~~~ 147 (172)
T 2y9m_A 122 CVHAVWRLLREPVCDSPLDVDIGNII 147 (172)
T ss_dssp HHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999999999999999999999987
No 34
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.7e-39 Score=224.65 Aligned_cols=110 Identities=26% Similarity=0.493 Sum_probs=100.3
Q ss_pred CcccEEee---CCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC----
Q psy89 8 HHLGLRIG---YGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE---- 80 (119)
Q Consensus 8 ~~~~v~~~---~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~---- 80 (119)
++.|+.+. ++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|+|+||||||+.+|+||+++|..
T Consensus 30 ~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~ 108 (167)
T 3fn1_B 30 LPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSID 108 (167)
T ss_dssp SCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSS
T ss_pred CCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCC
Confidence 34455543 46899999998 89999999999999999999999999999999999999999999999999974
Q ss_pred CCCCCCcCCHHHHHHHHHHHhcC-CCCCCCcCHHHHhhc
Q psy89 81 EKDWKPAITIKQILLGIQDLLNE-PNIKDPAQAEAYTIY 118 (119)
Q Consensus 81 ~~~W~p~~~l~~vl~~i~~~l~~-p~~~~p~n~~aa~~y 118 (119)
.++|+|+++|++||++|+++|.+ |++++|+|.|||++|
T Consensus 109 ~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~ 147 (167)
T 3fn1_B 109 GTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHH 147 (167)
T ss_dssp TTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHH
Confidence 24799999999999999999999 799999999999876
No 35
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=9.1e-40 Score=235.64 Aligned_cols=109 Identities=31% Similarity=0.662 Sum_probs=100.6
Q ss_pred CcccEEee--CC-CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccC-CCeEEccCCCCCCC
Q psy89 8 HHLGLRIG--YG-HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKD 83 (119)
Q Consensus 8 ~~~~v~~~--~~-~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~ 83 (119)
++.||.+. ++ ++++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||++ +|+||+++|.. +
T Consensus 18 ~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~ 95 (215)
T 1tte_A 18 PAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRN--A 95 (215)
T ss_dssp TCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTC--C
T ss_pred CCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCC--C
Confidence 44555544 44 4569999999999999999999999999999999999999999999999998 99999999984 9
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|+++|.+||++|+++|.+|++++|+|.+||++|
T Consensus 96 WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~ 130 (215)
T 1tte_A 96 WSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 130 (215)
T ss_dssp SCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999999999999999999999999999999876
No 36
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3.9e-39 Score=222.45 Aligned_cols=98 Identities=26% Similarity=0.450 Sum_probs=95.2
Q ss_pred CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeE---EccCCCCCCCCCCcCCHHHHH
Q psy89 18 HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTV---CLSLLDEEKDWKPAITIKQIL 94 (119)
Q Consensus 18 ~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~v---cl~~l~~~~~W~p~~~l~~vl 94 (119)
|+++|+++|.||++||||||+|+++|.||++||++||+|+|+|+|+||||+++|+| |+++|. +|+|+++|++||
T Consensus 53 nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~---~WsP~~ti~~vL 129 (156)
T 2q0v_A 53 TLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILK---NWNRNYTIETIL 129 (156)
T ss_dssp TCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHH---TCCTTCCHHHHH
T ss_pred cceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhccccc---CCCCcCcHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999 888886 699999999999
Q ss_pred HHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 95 LGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 95 ~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++|+++|.+|++++|+|++||++|
T Consensus 130 ~sI~~ll~~Pn~~~p~n~~aa~~y 153 (156)
T 2q0v_A 130 ISLRQEMLSSANKRLPQPNEGEVY 153 (156)
T ss_dssp HHHHHHTTSTTTTTCCCCCTTCBC
T ss_pred HHHHHHHhCCCCCCcCChHHHHHh
Confidence 999999999999999999999987
No 37
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.6e-38 Score=231.94 Aligned_cols=109 Identities=30% Similarity=0.655 Sum_probs=102.3
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p 86 (119)
..+.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|+||+++|. ++|+|
T Consensus 78 ~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~--~~WsP 155 (253)
T 3e46_A 78 NQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILK--DQWAA 155 (253)
T ss_dssp TSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGT--TCCCT
T ss_pred CCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeeccccc--CCCCC
Confidence 3444556678999999999999999999999999999999999999999999999999999 48999999997 49999
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 87 AITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 87 ~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 156 ~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~ 187 (253)
T 3e46_A 156 AMTLRTVLLSLQALLAAAEPDDPQDAVVANQY 187 (253)
T ss_dssp TCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCCChhhHHHHHHH
Confidence 99999999999999999999999999999886
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4e-39 Score=225.36 Aligned_cols=107 Identities=30% Similarity=0.554 Sum_probs=100.6
Q ss_pred cccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCCc
Q psy89 9 HLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKPA 87 (119)
Q Consensus 9 ~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p~ 87 (119)
+.+|. .++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|+||+++|.. +|+|+
T Consensus 28 ~~~v~-~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~--~W~p~ 104 (171)
T 1yf9_A 28 TRKVY-PSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQ--TWTPM 104 (171)
T ss_dssp SSCEE-ECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHH--HCCTT
T ss_pred CCCCC-CCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecccccc--CCCCC
Confidence 35674 578999999999999999999999999999999999999999999999999999 499999999974 89999
Q ss_pred CCHHHHHHHH-HHHhcCCCCCCCcCHHHHhhc
Q psy89 88 ITIKQILLGI-QDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 88 ~~l~~vl~~i-~~~l~~p~~~~p~n~~aa~~y 118 (119)
+++++||++| +++|.+|+.++|+|.+||++|
T Consensus 105 ~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~ 136 (171)
T 1yf9_A 105 YQLENIFDVFLPQLLRYPNPSDPLNVQAAHLL 136 (171)
T ss_dssp CCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999999997 799999999999999999876
No 39
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=228.26 Aligned_cols=108 Identities=32% Similarity=0.608 Sum_probs=101.5
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccC-CCeEEccCCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~W~p 86 (119)
.++.+.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|+||||||+. +|+||+++|. ++|+|
T Consensus 40 ~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~--~~WsP 116 (179)
T 2z5d_A 40 SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVIN--QTWTA 116 (179)
T ss_dssp SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHH--HHCCT
T ss_pred CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccc--cCCCC
Confidence 34556665 67899999999999999999999999999999999999999999999999998 9999999997 48999
Q ss_pred cCCHHHHHHH-HHHHhcCCCCCCCcCHHHHhhc
Q psy89 87 AITIKQILLG-IQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 87 ~~~l~~vl~~-i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++++++||++ |+++|.+|++++|+|.+||++|
T Consensus 117 ~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~ 149 (179)
T 2z5d_A 117 LYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 149 (179)
T ss_dssp TCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 9999999999 9999999999999999999876
No 40
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.2e-39 Score=218.29 Aligned_cols=98 Identities=27% Similarity=0.436 Sum_probs=94.8
Q ss_pred CceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCC-CeE--EccCCCCCCCCCCcCCHHHHH
Q psy89 18 HGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPS-GTV--CLSLLDEEKDWKPAITIKQIL 94 (119)
Q Consensus 18 ~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~-G~v--cl~~l~~~~~W~p~~~l~~vl 94 (119)
|+++|+++|.||++||||||.|+++|.||++||++||+|+|+|+|+||||+.+ |+| |+++|. +|+|++++++||
T Consensus 38 nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~---~W~p~~~i~~vl 114 (138)
T 1jat_B 38 TMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR---DWKRAYTMETLL 114 (138)
T ss_dssp TCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH---TCCTTCCHHHHH
T ss_pred cceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC---CCCCcCcHHHHH
Confidence 48999999999999999999999999999999999999999999999999986 999 899885 899999999999
Q ss_pred HHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 95 LGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 95 ~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++|+++|.+|++++|+|++||++|
T Consensus 115 ~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 115 LDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp HHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred HHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999999999999999999987
No 41
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=5.2e-38 Score=217.51 Aligned_cols=106 Identities=21% Similarity=0.309 Sum_probs=96.1
Q ss_pred cEEe-eCCC--ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCC
Q psy89 11 GLRI-GYGH--GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKP 86 (119)
Q Consensus 11 ~v~~-~~~~--~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p 86 (119)
.+.+ +++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+|+|+||||+ .+|+||+++|...++|+|
T Consensus 47 ~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP 126 (160)
T 2a4d_A 47 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQN 126 (160)
T ss_dssp EEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCT
T ss_pred EEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCc
Confidence 3444 4555 89999999999999999999999999999999999999999999999999 699999999872138999
Q ss_pred cCCHHHHHHHHHHHhc-CCCCCCCcCHHHHh
Q psy89 87 AITIKQILLGIQDLLN-EPNIKDPAQAEAYT 116 (119)
Q Consensus 87 ~~~l~~vl~~i~~~l~-~p~~~~p~n~~aa~ 116 (119)
+++|++||++|+++|. +||.++|+|.|||.
T Consensus 127 ~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 157 (160)
T 2a4d_A 127 SYSIKVVLQELRRLMMSKENMKLPQPPEGQC 157 (160)
T ss_dssp TCCHHHHHHHHHHHHTSTTTTTCCCCCTTCB
T ss_pred cCcHHHHHHHHHHHHccCCCCCCCCChhhcc
Confidence 9999999999999995 69999999999983
No 42
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.5e-37 Score=220.49 Aligned_cols=102 Identities=30% Similarity=0.586 Sum_probs=97.4
Q ss_pred eeCCCce---eeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCCCcCCH
Q psy89 14 IGYGHGY---PQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWKPAITI 90 (119)
Q Consensus 14 ~~~~~~~---~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~p~~~l 90 (119)
++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++|. ++|+|++++
T Consensus 55 p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~--~~W~p~~~i 131 (190)
T 3o2u_A 55 PDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILR--EDWSPALDL 131 (190)
T ss_dssp TTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGT--TTCCTTCCH
T ss_pred CCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhcc--CCCCCCCCH
Confidence 3467899 9999997 888999999999999999999999999999999999999999999999998 499999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 91 KQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 91 ~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
++||++|+++|.+|++++|+|.+||++|
T Consensus 132 ~~vL~~i~~ll~~pn~~~pln~~aa~~~ 159 (190)
T 3o2u_A 132 QSIITGLLFLFLEPNPNDPLNKDAAKLL 159 (190)
T ss_dssp HHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcchhHHHHHHH
Confidence 9999999999999999999999999987
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-37 Score=207.02 Aligned_cols=101 Identities=31% Similarity=0.521 Sum_probs=88.5
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCc-ccccccCCCeEEccCCCCCCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i-~HpnV~~~G~vcl~~l~~~~~ 83 (119)
.+...+.+.++++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.|++ +||||+.+|+||+++|. ++
T Consensus 21 ~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~--~~ 98 (125)
T 2fo3_A 21 NPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLG--DD 98 (125)
T ss_dssp SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGT--TT
T ss_pred CCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcC--CC
Confidence 3334445556678999999999999999999999999999999999999999999996 99999999999999997 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCC
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIK 107 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~ 107 (119)
|+|++++++||++|+++|.+|+..
T Consensus 99 W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 99 YNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp CCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999865
No 44
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2e-37 Score=240.57 Aligned_cols=113 Identities=31% Similarity=0.627 Sum_probs=105.1
Q ss_pred ccCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCC
Q psy89 4 QTQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 4 ~~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
+.+...+.+.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|+||||+++|+||+++|. ++
T Consensus 17 ~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~--~~ 94 (399)
T 4ddg_A 17 RDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILR--SQ 94 (399)
T ss_dssp HSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGT--TS
T ss_pred hCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCcccc--cC
Confidence 4444555555677899999999999999999999999999999999999999999999999999999999999997 49
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCCcCHHHHhhc
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIY 118 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p~n~~aa~~y 118 (119)
|+|++++++||++|+++|.+|++++|+|.+||++|
T Consensus 95 W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~ 129 (399)
T 4ddg_A 95 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 129 (399)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 99999999999999999999999999999999876
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.6e-37 Score=206.30 Aligned_cols=99 Identities=26% Similarity=0.499 Sum_probs=91.1
Q ss_pred CCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCc-ccccccCCCeEEccCCCCCCCC
Q psy89 6 QNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDW 84 (119)
Q Consensus 6 ~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i-~HpnV~~~G~vcl~~l~~~~~W 84 (119)
+...+.+.+.++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.|++ +||||+.+|+||+++|. ++|
T Consensus 36 ~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~--~~W 113 (136)
T 2h2y_A 36 PPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLG--DDY 113 (136)
T ss_dssp CCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGT--TTC
T ss_pred CCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECcccc--CCC
Confidence 334444556678999999999999999999999999999999999999999999996 99999999999999997 499
Q ss_pred CCcCCHHHHHHHHHHHhcCCCC
Q psy89 85 KPAITIKQILLGIQDLLNEPNI 106 (119)
Q Consensus 85 ~p~~~l~~vl~~i~~~l~~p~~ 106 (119)
+|++++++||++|+++|.+|+.
T Consensus 114 sP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 114 NPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCcHHHHHHHHHHHHhCcCc
Confidence 9999999999999999999875
No 46
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=217.33 Aligned_cols=104 Identities=21% Similarity=0.315 Sum_probs=95.3
Q ss_pred EEe-eCCC--ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCccccccc-CCCeEEccCCCCCCCCCCc
Q psy89 12 LRI-GYGH--GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVY-PSGTVCLSLLDEEKDWKPA 87 (119)
Q Consensus 12 v~~-~~~~--~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~W~p~ 87 (119)
+.+ +++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+|+|+||||+ .+|+||+++|...++|+|+
T Consensus 58 ~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~ 137 (170)
T 2hlw_A 58 WGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNS 137 (170)
T ss_dssp EEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSS
T ss_pred EEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCcc
Confidence 344 4554 89999999999999999999999999999999999999999999999999 7999999998621389999
Q ss_pred CCHHHHHHHHHHHhc-CCCCCCCcCHHHH
Q psy89 88 ITIKQILLGIQDLLN-EPNIKDPAQAEAY 115 (119)
Q Consensus 88 ~~l~~vl~~i~~~l~-~p~~~~p~n~~aa 115 (119)
++|++||++|+++|. +||.++|+|.|||
T Consensus 138 ~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 138 YSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 999999999999997 5999999999998
No 47
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=4e-37 Score=214.44 Aligned_cols=109 Identities=21% Similarity=0.481 Sum_probs=99.3
Q ss_pred CcccEEeeCCCceeeEEEEeCCCCCCCC--CCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCC
Q psy89 8 HHLGLRIGYGHGYPQRCGFKNPTNTPWE--SGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWK 85 (119)
Q Consensus 8 ~~~~v~~~~~~~~~W~~~i~gp~~tpye--gg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~ 85 (119)
..+.+.++++|+++|+++|.||+||||+ ||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++|. ++|+
T Consensus 38 ~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~--~~W~ 115 (167)
T 4ds2_A 38 STAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVN--DFWT 115 (167)
T ss_dssp SCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHH--TTCC
T ss_pred CcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCc--CCCC
Confidence 3445556788999999999999999999 99999999999999999999999999999999999999999997 4999
Q ss_pred CcCCHHHHHH-HHHHHhcC--CCCCCCcCHHHHhhc
Q psy89 86 PAITIKQILL-GIQDLLNE--PNIKDPAQAEAYTIY 118 (119)
Q Consensus 86 p~~~l~~vl~-~i~~~l~~--p~~~~p~n~~aa~~y 118 (119)
|+++++++|+ .|++++.+ |+.++|+|.|||++|
T Consensus 116 p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~ 151 (167)
T 4ds2_A 116 PDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYL 151 (167)
T ss_dssp TTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHH
Confidence 9999999755 57788875 899999999999876
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-35 Score=199.99 Aligned_cols=87 Identities=28% Similarity=0.571 Sum_probs=83.3
Q ss_pred eeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcc--cccccCCCeEEccCCCCCCCCCCcCCHH
Q psy89 14 IGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLF--HPNVYPSGTVCLSLLDEEKDWKPAITIK 91 (119)
Q Consensus 14 ~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~--HpnV~~~G~vcl~~l~~~~~W~p~~~l~ 91 (119)
.+++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.|+++ ||||+.+|+||+++|. ++|+|+++++
T Consensus 48 ~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~--~~WsP~~ti~ 125 (136)
T 2a7l_A 48 SVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILT--EDWSPALSVQ 125 (136)
T ss_dssp CCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGT--TTCCTTSCHH
T ss_pred eCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcC--CCCCCCCcHH
Confidence 45679999999999999999999999999999999999999999999999 9999999999999998 4999999999
Q ss_pred HHHHHHHHHhc
Q psy89 92 QILLGIQDLLN 102 (119)
Q Consensus 92 ~vl~~i~~~l~ 102 (119)
+||++|+++|.
T Consensus 126 ~vL~sI~slL~ 136 (136)
T 2a7l_A 126 SVCLSIISMLS 136 (136)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=212.94 Aligned_cols=103 Identities=32% Similarity=0.708 Sum_probs=95.7
Q ss_pred EEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCC-----cccccccCCCeEEccCCCC-----C
Q psy89 12 LRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE-----E 81 (119)
Q Consensus 12 v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~-----i~HpnV~~~G~vcl~~l~~-----~ 81 (119)
+.++++|++.|+++|.||+||||+||+|+++|.||++||++||+|+|+|+ ||||||+.+|+||+++|.. .
T Consensus 102 v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~ 181 (323)
T 3ceg_A 102 VRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPE 181 (323)
T ss_dssp EEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGG
T ss_pred ecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCc
Confidence 44678899999999999999999999999999999999999999999998 9999999999999999972 1
Q ss_pred CCCCCcC-CHHHHHHHHHHHhc--CCCCCCCcCHHH
Q psy89 82 KDWKPAI-TIKQILLGIQDLLN--EPNIKDPAQAEA 114 (119)
Q Consensus 82 ~~W~p~~-~l~~vl~~i~~~l~--~p~~~~p~n~~a 114 (119)
+.|+|++ +|.+||++|+++|. +|++++|+|.+|
T Consensus 182 e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a 217 (323)
T 3ceg_A 182 EKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERS 217 (323)
T ss_dssp GSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGG
T ss_pred CCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHH
Confidence 4899999 89999999999996 788899999876
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=2.3e-32 Score=193.48 Aligned_cols=103 Identities=22% Similarity=0.371 Sum_probs=85.4
Q ss_pred cCCCcccEEeeCCCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCC-CCC
Q psy89 5 TQNHHLGLRIGYGHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDE-EKD 83 (119)
Q Consensus 5 ~~~~~~~v~~~~~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~-~~~ 83 (119)
.+...+.+.++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|+|+ ||||+.+|+||+++|.. .+.
T Consensus 29 ~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~ 106 (187)
T 2f4w_A 29 DPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDT 106 (187)
T ss_dssp SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC----------
T ss_pred CCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCccC
Confidence 334445555677899999999999999999999999999999999999999999999 99999999999999952 159
Q ss_pred CCCcCCHHHHHHHHHHHhcCCCCCCC
Q psy89 84 WKPAITIKQILLGIQDLLNEPNIKDP 109 (119)
Q Consensus 84 W~p~~~l~~vl~~i~~~l~~p~~~~p 109 (119)
|+|+++|.+||.+|+++|.+|+++..
T Consensus 107 W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 107 WNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred CCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 99999999999999999999987643
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=9.2e-33 Score=195.34 Aligned_cols=98 Identities=21% Similarity=0.448 Sum_probs=90.1
Q ss_pred cccEEeeCCCceeeEEEEeCC-CCCCCCC-----------CeEEEEEEeCCCCCCCCCeeEEcCCcccc-cccCCCeEEc
Q psy89 9 HLGLRIGYGHGYPQRCGFKNP-TNTPWES-----------GSYKLRMIFKDDYPSTPPKCKFEPPLFHP-NVYPSGTVCL 75 (119)
Q Consensus 9 ~~~v~~~~~~~~~W~~~i~gp-~~tpyeg-----------g~f~~~i~~p~~yP~~pP~v~f~t~i~Hp-nV~~~G~vcl 75 (119)
.+.+.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+|+|.|+++|| ||+.+|+||+
T Consensus 49 ~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL 128 (186)
T 1zuo_A 49 IYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCM 128 (186)
T ss_dssp SEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCC
T ss_pred cEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEe
Confidence 345566788999999999998 9999998 89999999999999999999999999999 6999999999
Q ss_pred cCCCCCCCCCCcCCHHHHHHHHHHHhcCCCCC
Q psy89 76 SLLDEEKDWKPAITIKQILLGIQDLLNEPNIK 107 (119)
Q Consensus 76 ~~l~~~~~W~p~~~l~~vl~~i~~~l~~p~~~ 107 (119)
++|.. +.|+|+++|++||++|+++|.+|+..
T Consensus 129 ~iL~~-~~WsP~~ti~~VL~sI~slL~~p~a~ 159 (186)
T 1zuo_A 129 ELLTK-QGWSSAYSIESVIMQINATLVKGKAR 159 (186)
T ss_dssp GGGST-TTCCTTSCHHHHHHHHHHHHHHTTCE
T ss_pred ccCCC-CCCCCcCcHHHHHHHHHHHHcCCChh
Confidence 99974 58999999999999999999988654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.88 E-value=3.2e-24 Score=147.82 Aligned_cols=82 Identities=15% Similarity=0.193 Sum_probs=73.5
Q ss_pred eeCCCceeeEEEEeCCCCCCCCCC----------eEEEEEEeCCCCCCCCCeeEEcCC-cccccccCCCeEEccCCCCC-
Q psy89 14 IGYGHGYPQRCGFKNPTNTPWESG----------SYKLRMIFKDDYPSTPPKCKFEPP-LFHPNVYPSGTVCLSLLDEE- 81 (119)
Q Consensus 14 ~~~~~~~~W~~~i~gp~~tpyegg----------~f~~~i~~p~~yP~~pP~v~f~t~-i~HpnV~~~G~vcl~~l~~~- 81 (119)
..++|++.|.+.+.||.||+|+|| .|++++.||++||.+||+|+|.++ ++||||+.+|+||++++...
T Consensus 50 p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~ 129 (172)
T 2z6o_A 50 NNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPL 129 (172)
T ss_dssp HHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHH
T ss_pred cCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhcccc
Confidence 345689999999999999999999 999999999999999999999998 99999999999999999431
Q ss_pred -CCCCCcCCHHHHHH
Q psy89 82 -KDWKPAITIKQILL 95 (119)
Q Consensus 82 -~~W~p~~~l~~vl~ 95 (119)
+.|+|.++|.++|.
T Consensus 130 Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 130 WARNVPKFGLAHLMA 144 (172)
T ss_dssp HHHHTTSCCHHHHHH
T ss_pred ccccCCccCHHHHHh
Confidence 14559999999874
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=6.2e-21 Score=131.81 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=83.7
Q ss_pred ccEEeeCCCceeeEEEEeCCCCCCCCCCe---EEEEEEeCCCCCCCCCeeEEcC-------C---cc-cccccCCCeEEc
Q psy89 10 LGLRIGYGHGYPQRCGFKNPTNTPWESGS---YKLRMIFKDDYPSTPPKCKFEP-------P---LF-HPNVYPSGTVCL 75 (119)
Q Consensus 10 ~~v~~~~~~~~~W~~~i~gp~~tpyegg~---f~~~i~~p~~yP~~pP~v~f~t-------~---i~-HpnV~~~G~vcl 75 (119)
.+++..++...++-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.+ + |+ ||||+++|+||+
T Consensus 51 t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~l 130 (162)
T 3r3q_A 51 TRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIAL 130 (162)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCC
T ss_pred eeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeC
Confidence 34455566677788888888889999999 8899999999999999998865 1 77 999999999999
Q ss_pred cCCCCCCCCCC-cCCHHHHHHHHHHHhcCCCCCC
Q psy89 76 SLLDEEKDWKP-AITIKQILLGIQDLLNEPNIKD 108 (119)
Q Consensus 76 ~~l~~~~~W~p-~~~l~~vl~~i~~~l~~p~~~~ 108 (119)
++|. +|++ +.++.++|++|+++|.+|+++.
T Consensus 131 pyL~---~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 131 PILH---AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp GGGG---SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccc---cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 9995 7999 5899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.61 E-value=5.1e-17 Score=109.99 Aligned_cols=68 Identities=18% Similarity=0.336 Sum_probs=61.9
Q ss_pred eCCCceeeEEEEeCCCCCCCCCC----------eEEEEEEeCCCCCCCCCeeEEcCC-cccccccCCCeEEccCCCCCCC
Q psy89 15 GYGHGYPQRCGFKNPTNTPWESG----------SYKLRMIFKDDYPSTPPKCKFEPP-LFHPNVYPSGTVCLSLLDEEKD 83 (119)
Q Consensus 15 ~~~~~~~W~~~i~gp~~tpyegg----------~f~~~i~~p~~yP~~pP~v~f~t~-i~HpnV~~~G~vcl~~l~~~~~ 83 (119)
.+++...|...+.||.||+|+|+ .|++++.||.+||.+||+|+|.+. .+||+++.+|+||++++
T Consensus 53 nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh----- 127 (168)
T 3kpa_A 53 NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH----- 127 (168)
T ss_dssp HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT-----
T ss_pred cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc-----
Confidence 34567789999999999999999 999999999999999999999996 89999999999999984
Q ss_pred CCCc
Q psy89 84 WKPA 87 (119)
Q Consensus 84 W~p~ 87 (119)
|+|.
T Consensus 128 wkPl 131 (168)
T 3kpa_A 128 FFPL 131 (168)
T ss_dssp HHHH
T ss_pred cchh
Confidence 6665
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.57 E-value=2.7e-15 Score=101.97 Aligned_cols=79 Identities=20% Similarity=0.449 Sum_probs=70.3
Q ss_pred CCceeeEEEEeCCCCCCCCCCeEE--EEEEeCCCCCCCCCeeEEcCC------cccccccCCCeEEccCCCCCCCCCC-c
Q psy89 17 GHGYPQRCGFKNPTNTPWESGSYK--LRMIFKDDYPSTPPKCKFEPP------LFHPNVYPSGTVCLSLLDEEKDWKP-A 87 (119)
Q Consensus 17 ~~~~~W~~~i~gp~~tpyegg~f~--~~i~~p~~yP~~pP~v~f~t~------i~HpnV~~~G~vcl~~l~~~~~W~p-~ 87 (119)
.+++.|.++|. .+|+|+.|. +.|.||++||++||.| |.++ ..|+||+.+|+||++.|. +|++ .
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~---~W~~~~ 122 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH---EWKHPQ 122 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH---TCCTTT
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc---ccCCCC
Confidence 37899999998 679999998 4899999999999999 6555 489999999999999996 7988 7
Q ss_pred CCHHHHHHHHHHHhcC
Q psy89 88 ITIKQILLGIQDLLNE 103 (119)
Q Consensus 88 ~~l~~vl~~i~~~l~~ 103 (119)
.+|.+++..|++.|.+
T Consensus 123 snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 123 SDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999999999999963
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.35 E-value=0.045 Score=35.18 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=27.5
Q ss_pred eeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcC
Q psy89 20 YPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEP 60 (119)
Q Consensus 20 ~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t 60 (119)
....+.+..-.+..-+.-.+.+.+.+|++||..+|.+...+
T Consensus 38 ~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 38 PSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 44555554222222233478899999999999999998754
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=93.85 E-value=0.2 Score=32.05 Aligned_cols=24 Identities=17% Similarity=0.400 Sum_probs=21.3
Q ss_pred CeEEEEEEeCCCCCCCCCeeEEcC
Q psy89 37 GSYKLRMIFKDDYPSTPPKCKFEP 60 (119)
Q Consensus 37 g~f~~~i~~p~~yP~~pP~v~f~t 60 (119)
-.+.+.+.+|++||..+|.+...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 468899999999999999998765
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.66 E-value=0.25 Score=32.03 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=28.3
Q ss_pred ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcC
Q psy89 19 GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEP 60 (119)
Q Consensus 19 ~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t 60 (119)
.....+.+.+..+. -..-.+.+.+.+|++||..+|.+...+
T Consensus 45 ~~~f~I~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDKE-PVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSCS-SCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCCC-CCceEEEEEEECCCCCCCCCCeEEEec
Confidence 34556666633221 113478899999999999999998765
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.62 E-value=0.33 Score=31.04 Aligned_cols=41 Identities=20% Similarity=0.124 Sum_probs=27.7
Q ss_pred ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcC
Q psy89 19 GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEP 60 (119)
Q Consensus 19 ~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t 60 (119)
...+.+.+...... =..-.+.+.+.+|++||..+|.+...+
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 34666666532211 012378999999999999999987653
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=92.29 E-value=0.57 Score=32.50 Aligned_cols=64 Identities=14% Similarity=0.265 Sum_probs=48.5
Q ss_pred CCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccccccCCCeEEccCCCCCCCCCCcCCHHHHHHH
Q psy89 17 GHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWKPAITIKQILLG 96 (119)
Q Consensus 17 ~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~W~p~~~l~~vl~~ 96 (119)
+++....+.+.... |....+.|.++.+||.++|.+...-+. |. . -.|++..++..++.+
T Consensus 23 ~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------------~--~~w~~~ssL~~v~~q 81 (186)
T 3zqs_A 23 TCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF------------C--ASWTPQSSLISIYSQ 81 (186)
T ss_dssp TTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC------------C--CCCCTTCCHHHHHHH
T ss_pred CCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------------c--cccCCCccHHHHHHH
Confidence 46777788887544 457889999999999999988755442 11 1 289999999999888
Q ss_pred HHHHh
Q psy89 97 IQDLL 101 (119)
Q Consensus 97 i~~~l 101 (119)
.+..+
T Consensus 82 F~~~L 86 (186)
T 3zqs_A 82 FLAAI 86 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77776
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.08 E-value=0.21 Score=33.11 Aligned_cols=24 Identities=21% Similarity=0.401 Sum_probs=21.4
Q ss_pred eEEEEEEeCCCCCCCCCeeEEcCC
Q psy89 38 SYKLRMIFKDDYPSTPPKCKFEPP 61 (119)
Q Consensus 38 ~f~~~i~~p~~yP~~pP~v~f~t~ 61 (119)
.+.+.+.+|.+||..+|.+...+.
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987764
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.06 E-value=0.25 Score=32.97 Aligned_cols=24 Identities=13% Similarity=0.157 Sum_probs=21.6
Q ss_pred eEEEEEEeCCCCCCCCCeeEEcCC
Q psy89 38 SYKLRMIFKDDYPSTPPKCKFEPP 61 (119)
Q Consensus 38 ~f~~~i~~p~~yP~~pP~v~f~t~ 61 (119)
.+.++|.+|.+||..+|.+...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987664
No 63
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=90.76 E-value=0.14 Score=33.14 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=20.3
Q ss_pred CeEEEEEEeCCCCCCCCCeeEEc
Q psy89 37 GSYKLRMIFKDDYPSTPPKCKFE 59 (119)
Q Consensus 37 g~f~~~i~~p~~yP~~pP~v~f~ 59 (119)
-.+.+.+.||++||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 36889999999999999999874
No 64
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=38.85 E-value=29 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=21.1
Q ss_pred CCCeEEEEEEeCCCCCC-----CCCeeEEc
Q psy89 35 ESGSYKLRMIFKDDYPS-----TPPKCKFE 59 (119)
Q Consensus 35 egg~f~~~i~~p~~yP~-----~pP~v~f~ 59 (119)
+.|.|.|+-.+|-.||. +||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 35889999999999998 78888764
No 65
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=28.27 E-value=1.4e+02 Score=20.19 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=29.8
Q ss_pred CCceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcC
Q psy89 17 GHGYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEP 60 (119)
Q Consensus 17 ~~~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t 60 (119)
+...+|.+-+.|+.|.-...-+=++...|.+.|+. |.-.+..
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~ 71 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEA 71 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeC
Confidence 35789999999987754444466788889999975 4444433
No 66
>1f08_A Replication protein E1; DNA-binding domain, initiator protein, helicase; 1.90A {Bovine papillomavirus} SCOP: d.89.1.2 PDB: 1ksx_A 1ksy_A
Probab=24.63 E-value=14 Score=24.48 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=50.8
Q ss_pred ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccc--cccCCCeEEccCCCCCCCCCCcCCHHHHHHH
Q psy89 19 GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHP--NVYPSGTVCLSLLDEEKDWKPAITIKQILLG 96 (119)
Q Consensus 19 ~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~Hp--nV~~~G~vcl~~l~~~~~W~p~~~l~~vl~~ 96 (119)
-..|-+.+.|-....+|+..-.+ -|.+.+ .|- ....-|.+++=++ .++.+.+-++|..-
T Consensus 34 c~dWVv~~fgv~~~l~ea~k~lL-----------q~hC~y----~~~~~~~~~~G~~~L~Ll----~Fk~~KsReTV~kl 94 (148)
T 1f08_A 34 NQQWVLAVFGLAEVFFEASFELL-----------KKQCSF----LQMQKRSHEGGTCAVYLI----CFNTAKSRETVRNL 94 (148)
T ss_dssp EEEEEEEEESCCHHHHHHHHHHH-----------HTTEEE----EEEEEEEETTEEEEEEEE----EEEEEECHHHHHHH
T ss_pred ccccEEEEEecCHHHHHHHHHHH-----------HhhceE----EEEEeeccCCceEEEEEE----EEecCCCHHHHHHH
Confidence 36899999998877776632111 011111 111 1112467777666 67888888999999
Q ss_pred HHHHhcCCCCC---CC--cCHHHHhhcC
Q psy89 97 IQDLLNEPNIK---DP--AQAEAYTIYW 119 (119)
Q Consensus 97 i~~~l~~p~~~---~p--~n~~aa~~y~ 119 (119)
|.++|.-++.. +| ++.-+|.+||
T Consensus 95 l~~lLnv~e~q~L~ePPK~RS~~aALfw 122 (148)
T 1f08_A 95 MANMLNVREECLMLQPPKIRGLSAALFW 122 (148)
T ss_dssp HHHHHTCCGGGEEEECBCCSCHHHHHHH
T ss_pred HHHhcCCCHHHEecCCCCCCCcceeeee
Confidence 99998765522 33 5566778887
No 67
>1r9w_A Replication protein E1; HPV-18, DNA-binding domain, viral replication, initiator protein; 1.80A {Human papillomavirus type 18} SCOP: d.89.1.2
Probab=24.45 E-value=12 Score=24.79 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=51.0
Q ss_pred ceeeEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEcCCcccc--cccCCCeEEccCCCCCCCCCCcCCHHHHHHH
Q psy89 19 GYPQRCGFKNPTNTPWESGSYKLRMIFKDDYPSTPPKCKFEPPLFHP--NVYPSGTVCLSLLDEEKDWKPAITIKQILLG 96 (119)
Q Consensus 19 ~~~W~~~i~gp~~tpyegg~f~~~i~~p~~yP~~pP~v~f~t~i~Hp--nV~~~G~vcl~~l~~~~~W~p~~~l~~vl~~ 96 (119)
-..|-+.+.|.....+|+..-.+ -|.+.+ .|- ....-|.+++=++ .++.+.+-++|..-
T Consensus 31 c~dWVv~~~gv~~~l~ea~k~lL-----------q~hC~y----~~~~~~~~~~G~~~L~Ll----~Fk~~KsReTV~kl 91 (145)
T 1r9w_A 31 CTDWVTAIFGVNPTIAEGFKTLI-----------QPFILY----AHIQCLDCKWGVLILALL----RYKCGKSRLTVAKG 91 (145)
T ss_dssp EEEEEEEEEEECHHHHHTHHHHH-----------GGGEEE----EEEEEEEETTEEEEEEEE----EEEEEECHHHHHHH
T ss_pred ccccEEEEEecCHHHHHHHHHHH-----------HhhceE----EEEEeeccCCceEEEEEE----EEecCCCHHHHHHH
Confidence 35799999998888777632111 011111 111 1113467777666 67888888999998
Q ss_pred HHHHhcCCCCC---CC--cCHHHHhhcC
Q psy89 97 IQDLLNEPNIK---DP--AQAEAYTIYW 119 (119)
Q Consensus 97 i~~~l~~p~~~---~p--~n~~aa~~y~ 119 (119)
+.++|.-++.. +| ++.-+|.+||
T Consensus 92 l~~lLnV~~~q~L~ePPK~RS~~aALfw 119 (145)
T 1r9w_A 92 LSTLLHVPETCMLIQPPKLRSSVAALYW 119 (145)
T ss_dssp HHHHHCCCGGGEEEECBCSSCHHHHHHH
T ss_pred HHhhcCCCHHHEecCCCCccCcceeeee
Confidence 99988665522 23 5566778887
No 68
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=22.33 E-value=40 Score=21.83 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=24.3
Q ss_pred CCCCeeEEc---CCcccccccCCCeEEccCCCC
Q psy89 51 STPPKCKFE---PPLFHPNVYPSGTVCLSLLDE 80 (119)
Q Consensus 51 ~~pP~v~f~---t~i~HpnV~~~G~vcl~~l~~ 80 (119)
..||.|.+- +.--|.+|.++|..|+++|..
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 367887774 446889999999999999985
No 69
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=21.72 E-value=1.7e+02 Score=18.99 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=30.2
Q ss_pred CceeeE--EEEeCCCCCCCC-CCeEEEEEEeCCCCCCCCCeeEEcCC
Q psy89 18 HGYPQR--CGFKNPTNTPWE-SGSYKLRMIFKDDYPSTPPKCKFEPP 61 (119)
Q Consensus 18 ~~~~W~--~~i~gp~~tpye-gg~f~~~i~~p~~yP~~pP~v~f~t~ 61 (119)
.+.+|. +.+.|+.|.... .-+=++...+.+.|+. |...+..+
T Consensus 31 ~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~p 75 (140)
T 3qrl_A 31 PVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDP 75 (140)
T ss_dssp CCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECST
T ss_pred cccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCC
Confidence 357998 899999988654 3455677888888874 66666554
No 70
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=21.22 E-value=50 Score=23.50 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=20.9
Q ss_pred CCeEEEEEEeCCCCCC-------CCCeeEEc
Q psy89 36 SGSYKLRMIFKDDYPS-------TPPKCKFE 59 (119)
Q Consensus 36 gg~f~~~i~~p~~yP~-------~pP~v~f~ 59 (119)
.|.|.|+-.+|--||. +||.|.|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 4899999999999996 78888775
No 71
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=21.03 E-value=63 Score=22.26 Aligned_cols=23 Identities=13% Similarity=0.296 Sum_probs=19.8
Q ss_pred CeEEEEEEeCCCCCCC-----CCeeEEc
Q psy89 37 GSYKLRMIFKDDYPST-----PPKCKFE 59 (119)
Q Consensus 37 g~f~~~i~~p~~yP~~-----pP~v~f~ 59 (119)
|.|.|+-.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8899999999999986 7777664
No 72
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=20.85 E-value=51 Score=23.45 Aligned_cols=24 Identities=33% Similarity=0.617 Sum_probs=20.5
Q ss_pred CCeEEEEEEeCCCCC-------CCCCeeEEc
Q psy89 36 SGSYKLRMIFKDDYP-------STPPKCKFE 59 (119)
Q Consensus 36 gg~f~~~i~~p~~yP-------~~pP~v~f~ 59 (119)
.|.|.|+-.+|-.|| .+||.|.|.
T Consensus 135 ~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 135 NGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 499999999999998 378888775
No 73
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.02 E-value=1.5e+02 Score=17.78 Aligned_cols=22 Identities=18% Similarity=0.356 Sum_probs=17.6
Q ss_pred CeEEEEEEeCCCCCCCCCeeEEc
Q psy89 37 GSYKLRMIFKDDYPSTPPKCKFE 59 (119)
Q Consensus 37 g~f~~~i~~p~~yP~~pP~v~f~ 59 (119)
..+...|.|+..|.. +|+|.+-
T Consensus 29 R~~~~~V~F~~~F~~-~P~V~v~ 50 (101)
T 2ccv_A 29 RELAKNITFASPYCR-PPVVLLS 50 (101)
T ss_dssp EEEEEEEECSSCCSS-CCEEEEE
T ss_pred eEEEEEeEeCcccCC-CCEEEEE
Confidence 467788999999994 8888764
Done!