BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy890
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VYF8|COQ5_DROME 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Drosophila melanogaster GN=coq5 PE=1 SV=1
Length = 301
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%), Gaps = 5/123 (4%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR--DLFKVPVPNPRLR 68
GDI FR+L Y++ P + HVTV+DIN+ ML+VGE+RA+ L + N +
Sbjct: 112 GDITFRYLRYLNNQPN---PQQRPSHVTVSDINQHMLNVGEERAKRLGLTTDQLSNCTVA 168
Query: 69 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSM 128
+ A+AE+LP S++AYTIAFGIRN T +DK LSEAYRVL+PGGRF+CLEFSH+ N
Sbjct: 169 WQCADAEKLPFPDASFTAYTIAFGIRNCTHVDKVLSEAYRVLQPGGRFMCLEFSHLTNET 228
Query: 129 LQW 131
+QW
Sbjct: 229 MQW 231
>sp|A1UUE1|UBIE_BARBK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=ubiE PE=3 SV=1
Length = 260
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR LN K H TV DIN +ML+VG++RA ++ P + F+
Sbjct: 84 GDIAFRILNASRK----------KAHATVLDINHSMLNVGKKRA----QINGLAPFIDFV 129
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAE+LP S+ AYTIAFGIRNV IDKALSEA+RVLKPGGRFLCLEFS+V +L
Sbjct: 130 EANAEQLPFSDQSFDAYTIAFGIRNVPHIDKALSEAFRVLKPGGRFLCLEFSNVEMPLL 188
>sp|Q8FUZ3|UBIE_BRUSU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella suis biovar 1 (strain 1330) GN=ubiE PE=3
SV=1
Length = 269
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEVSGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|A9MCZ2|UBIE_BRUC2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=ubiE PE=3 SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEVSGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|Q8YDE4|UBIE_BRUME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=ubiE PE=3 SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|C0RMK3|UBIE_BRUMB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=ubiE PE=3 SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|Q576Q0|UBIE_BRUAB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus biovar 1 (strain 9-941) GN=ubiE PE=3
SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|Q2YJM4|UBIE_BRUA2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain 2308) GN=ubiE PE=3 SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|B2SC50|UBIE_BRUA1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain S19) GN=ubiE PE=3 SV=1
Length = 269
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 192
>sp|Q5ZLL5|COQ5_CHICK 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Gallus gallus GN=COQ5 PE=2 SV=1
Length = 311
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 82/143 (57%), Gaps = 28/143 (19%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPH------------------------VTVADINRAM 46
GDIAFRFLNYV + L + H V V DIN+ M
Sbjct: 101 GDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEM 160
Query: 47 LDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEA 106
L G+Q+A+ L + L ++ NAEEL + D + YTIAFGIRNVTRID AL EA
Sbjct: 161 LKAGKQKAQHLGY----SEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLALQEA 216
Query: 107 YRVLKPGGRFLCLEFSHVNNSML 129
YRVLKPGGRFLCLEFSHV+N +L
Sbjct: 217 YRVLKPGGRFLCLEFSHVSNPLL 239
>sp|Q0P5A2|COQ5_BOVIN 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Bos taurus GN=COQ5 PE=2 SV=1
Length = 330
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 82/142 (57%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYVD-----------KLPPNTLSEHCA------------PHVTVADINRAML 47
GDIAFRFLNYV + N E A HV V DIN+ ML
Sbjct: 118 GDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
+G+Q+AR L ++ +AEELP + + + YTIAFGIRNVT ID+AL EA+
Sbjct: 178 KIGKQKAR----AQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQALQEAH 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRFLCLEFS VNN +L
Sbjct: 234 RVLKPGGRFLCLEFSQVNNPLL 255
>sp|B8IJ00|UBIE_METNO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=ubiE PE=3 SV=1
Length = 252
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 77/115 (66%), Gaps = 15/115 (13%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR L P T HVTV DIN AML VG +RA D F R+ F+
Sbjct: 76 GDIAFRALQ---AGGPET-------HVTVLDINDAMLAVGRERAGDRFA-----GRIDFV 120
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
NAE LP+ S+ AYTIAFGIRNV RI++AL+EAYRVL+PGGRFLCLEFSHV+
Sbjct: 121 AGNAEALPLPDGSFDAYTIAFGIRNVPRIERALAEAYRVLQPGGRFLCLEFSHVD 175
>sp|A9WW74|UBIE_BRUSI Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=ubiE PE=3 SV=1
Length = 269
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 77/114 (67%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K + N L F+
Sbjct: 93 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLIDN--LEFV 138
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAEELP E +S+ AYTIAFGIRNV IDKALSEAY VLKPGGRFLCLEFS V
Sbjct: 139 EANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYCVLKPGGRFLCLEFSEV 192
>sp|Q6G577|UBIE_BARHE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=ubiE PE=3 SV=1
Length = 260
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 77/119 (64%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR LN + H TV DIN +ML VG++RA P+ + F+
Sbjct: 84 GDIAFRILN----------ASRQKAHATVLDINGSMLSVGKKRAEKNGLAPL----IDFV 129
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAE LP E S+ AYTIAFGIRNV ID+AL EA+RVLKPGGRFLCLEFS+V +L
Sbjct: 130 EANAEHLPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNVEMPLL 188
>sp|Q6G1I2|UBIE_BARQU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella quintana (strain Toulouse) GN=ubiE PE=3
SV=1
Length = 260
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 78/119 (65%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR LN K H TV DIN +ML VG++RA+ P+ + F+
Sbjct: 84 GDIAFRILNASRK----------KAHATVLDINSSMLSVGKKRAQKNGLAPLTD----FV 129
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAE LP E S+ AYTIAFGIRNV I++AL EA+RVLKPGGRFLCLEFS+V +L
Sbjct: 130 EANAEHLPFEDQSFDAYTIAFGIRNVPHINQALREAFRVLKPGGRFLCLEFSNVEMPLL 188
>sp|A9ILA7|UBIE_BART1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=ubiE PE=3 SV=1
Length = 260
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 75/114 (65%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR L + H TV DIN +ML VG+QRA+ P+ + F+
Sbjct: 84 GDIAFRILK----------ASRQKAHATVLDINGSMLSVGKQRAQKNGLAPL----IDFV 129
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EANAE LP E S+ AYTIAFGIRNV ID+AL EA+RVLKPGGRFLCLEFS+V
Sbjct: 130 EANAEHLPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNV 183
>sp|A6WYI0|UBIE_OCHA4 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=ubiE PE=3 SV=1
Length = 263
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + HVT+ DIN +ML VG +RA + K N L F+
Sbjct: 87 GDIAFRIVEASGR----------QAHVTILDINGSMLGVGRERA--IKKGLADN--LEFV 132
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
EA+AEELP E S+ AYTI+FGIRNV IDKALSEAYRVLKPGGRFLCLEFS V
Sbjct: 133 EASAEELPFEDASFDAYTISFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEV 186
>sp|Q5HYK3|COQ5_HUMAN 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Homo sapiens GN=COQ5 PE=1 SV=2
Length = 327
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 80/142 (56%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYVD-----------KLPPNTLSEHCAPH------------VTVADINRAML 47
GDIAFRFLNYV + N E A V V DIN+ ML
Sbjct: 118 GDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
VG+Q+A L ++ +AEELP + D + YTIAFGIRNVT ID+AL EA+
Sbjct: 178 KVGKQKAL----AQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAH 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRFLCLEFS VNN ++
Sbjct: 234 RVLKPGGRFLCLEFSQVNNPLI 255
>sp|Q98GV1|UBIE_RHILO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium loti (strain MAFF303099) GN=ubiE PE=3 SV=1
Length = 258
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 75/119 (63%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR ++ + H H TV DIN +ML VG RA+ + F+
Sbjct: 82 GDIAFRIVD----------ASHGNAHATVLDINGSMLGVGRDRAQK----KGLSGNTDFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP ++ AYTIAFGIRNV RID ALSEA+RVLKPGGRFLCLEFS V +L
Sbjct: 128 EANAEELPFADATFDAYTIAFGIRNVPRIDVALSEAFRVLKPGGRFLCLEFSEVEMPLL 186
>sp|Q9CXI0|COQ5_MOUSE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Mus musculus GN=Coq5 PE=2 SV=2
Length = 327
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 79/142 (55%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYVD-----------------------KLPPNTLSEHCAPHVTVADINRAML 47
GDIAFRFL+YV K N TV DINR ML
Sbjct: 118 GDIAFRFLSYVQAQHQRRQRRQLRTQQNLSWEEIAKKYQNEEDSLGGSLATVCDINREML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
VG+Q+A D L ++ +AEELP + DS+ YTIAFGIRNVT ID+AL EA+
Sbjct: 178 KVGKQKALD----QGHTAGLAWVLGDAEELPFDDDSFDVYTIAFGIRNVTHIDQALQEAH 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRFLCLEF VN+ ++
Sbjct: 234 RVLKPGGRFLCLEFGQVNDPLI 255
>sp|Q5RBK6|COQ5_PONAB 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Pongo abelii GN=COQ5 PE=2 SV=1
Length = 327
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 80/142 (56%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYVD-----------KLPPNTLSEHCAPH------------VTVADINRAML 47
GDIAFRFLNYV + N E A V + DIN+ ML
Sbjct: 118 GDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
VG+Q+A L ++ +AEELP + D + YTIAFGIRNVT ID+AL EA+
Sbjct: 178 KVGKQKAL----AQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAH 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRFLCLEFS VNN ++
Sbjct: 234 RVLKPGGRFLCLEFSQVNNPLI 255
>sp|Q2KDB0|UBIE_RHIEC Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ubiE
PE=3 SV=1
Length = 258
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 75/119 (63%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RA + L F+
Sbjct: 82 GDIAFRIVEASGR----------QAHATVLDINGSMLGVGAERAEK----KKLSGNLTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP E+ S+ AYTIAFGIRNV RIDKALSEAYRVLK GGR L LEFS V+ +L
Sbjct: 128 EANAEELPFEAASFDAYTIAFGIRNVPRIDKALSEAYRVLKRGGRLLVLEFSEVDMPLL 186
>sp|Q54VN2|COQ5_DICDI 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Dictyostelium discoideum GN=coq5 PE=3 SV=1
Length = 314
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 14/135 (10%)
Query: 11 GDIAFRFLNYVDKLP---PN----------TLSEHCAPH-VTVADINRAMLDVGEQRARD 56
GDI+FRFL+ + P PN L P TV DIN++ML+ G++R +
Sbjct: 110 GDISFRFLDKIKTSPNYFPNINKSNNGGGEVLKSSSLPSSATVFDINQSMLNEGKKRGLN 169
Query: 57 LFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRF 116
+P + +++ N+E+LP + ++++ YT++FGIRN T ID+ L EAYRVLKPGGRF
Sbjct: 170 KGYTDQSDPSIDWVQGNSEQLPFKDNTFNCYTVSFGIRNCTNIDQVLREAYRVLKPGGRF 229
Query: 117 LCLEFSHVNNSMLQW 131
LCLEFS V N +L++
Sbjct: 230 LCLEFSQVPNPLLRF 244
>sp|Q4V7R3|COQ5_XENLA 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Xenopus laevis GN=coq5 PE=2 SV=1
Length = 310
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 28/143 (19%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEH------------------------CAPHVTVADINRAM 46
GDI+FRF+NY+ + + + DIN+ M
Sbjct: 100 GDISFRFINYIRAQREKWIRQELKFQQDLSWPDISKTYQNKEEGSLMGSRAVICDINKEM 159
Query: 47 LDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEA 106
L VG Q++ L + L ++ +AEELP D + YTIAFGIRNVT I++AL EA
Sbjct: 160 LKVGLQKSLRL----GYSEGLSWVAGDAEELPFGDDKFDVYTIAFGIRNVTHIEQALQEA 215
Query: 107 YRVLKPGGRFLCLEFSHVNNSML 129
YRVLKPGGRFLCLEFSHVNN +L
Sbjct: 216 YRVLKPGGRFLCLEFSHVNNPLL 238
>sp|Q8UIH5|UBIE_AGRT5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=ubiE PE=3 SV=1
Length = 259
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GD+AFR + ++L H TV DIN +ML VGE+RA + L F+
Sbjct: 83 GDVAFRIIEASNRLA----------HATVLDINGSMLAVGEERAAK----KKLSDNLTFV 128
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP E++++ AYT+AFGIRNV RID AL EAYRVLK GGR L LEFS V+ +L
Sbjct: 129 EANAEELPFEANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDMPLL 187
>sp|Q4G064|COQ5_RAT 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Rattus norvegicus GN=Coq5 PE=2 SV=1
Length = 327
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 82/142 (57%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYVD-----------KLPPNTLSEHCAPH------------VTVADINRAML 47
GDIAFRFL+YV + N E A V V DINR ML
Sbjct: 118 GDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
VG+Q+A L + L ++ +AEELP + D + YTIAFGIRNVT ID+AL EA+
Sbjct: 178 KVGKQKA--LARGHTAG--LAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQEAH 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRFLCLEFS VN+ ++
Sbjct: 234 RVLKPGGRFLCLEFSQVNDPLI 255
>sp|Q1MME0|UBIE_RHIL3 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=ubiE PE=3 SV=1
Length = 258
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 74/119 (62%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RA + L F+
Sbjct: 82 GDIAFRIVEASGR----------QAHATVLDINGSMLGVGAERAEK----KKLSGNLTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP E+ S+ AYTIAFGIRNV RID ALSEAYRVLK GGR L LEFS V+ +L
Sbjct: 128 EANAEELPFEAGSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLL 186
>sp|B9JZF4|UBIE_AGRVS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=ubiE PE=3 SV=1
Length = 258
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 77/126 (61%), Gaps = 19/126 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + +L H TV DIN +ML VG++RA+ + L F+
Sbjct: 82 GDIAFRIIEASRRLA----------HATVLDINGSMLGVGQERAQK----KGLSDNLTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML- 129
EANAE LP E++ + AYTIAFGIRNV RID ALSEAYRVLK GGR L LEFS V +L
Sbjct: 128 EANAEALPFEANQFDAYTIAFGIRNVPRIDVALSEAYRVLKRGGRLLVLEFSEVQMPLLD 187
Query: 130 ----QW 131
QW
Sbjct: 188 RFYDQW 193
>sp|Q66L51|COQ5_DANRE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Danio rerio GN=coq5 PE=2 SV=1
Length = 327
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 79/142 (55%), Gaps = 27/142 (19%)
Query: 11 GDIAFRFLNYV--------------------DKLPPNTLSEHCAP---HVTVADINRAML 47
GDI+FRFL Y + + +S+ P V DIN+ ML
Sbjct: 118 GDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEML 177
Query: 48 DVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAY 107
VG+QRA D L ++ +AEELP + D + YTIAFGIRNVT I++AL EA+
Sbjct: 178 KVGKQRAED----AGITTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAF 233
Query: 108 RVLKPGGRFLCLEFSHVNNSML 129
RVLKPGGRF+CLEFS V N +L
Sbjct: 234 RVLKPGGRFMCLEFSKVTNPLL 255
>sp|B9J7S8|UBIE_AGRRK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
GN=ubiE PE=3 SV=1
Length = 258
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 74/115 (64%), Gaps = 14/115 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + ++L H TV DIN +ML VG +RA K N L F+
Sbjct: 82 GDIAFRIVEASNRLA----------HATVLDINGSMLGVGAERAAK--KKLTDN--LTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
EANAEELP E +S+ AYTIAFGIRNV RID AL EAYRVLK GGR L LEFS V+
Sbjct: 128 EANAEELPFEPNSFDAYTIAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVD 182
>sp|B3PZ92|UBIE_RHIE6 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium etli (strain CIAT 652) GN=ubiE PE=3 SV=1
Length = 258
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 74/119 (62%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RA + L F+
Sbjct: 82 GDIAFRIVEASGR----------QAHATVLDINGSMLGVGAERAEK----KKLSANLTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP E+ S+ AYTIAFGIRNV RID AL+EAYRVLK GGR L LEFS V+ +L
Sbjct: 128 EANAEELPFEAASFDAYTIAFGIRNVPRIDVALAEAYRVLKRGGRLLVLEFSEVDMPLL 186
>sp|B5ZYK8|UBIE_RHILW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
GN=ubiE PE=3 SV=1
Length = 258
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RA + L F+
Sbjct: 82 GDIAFRIVEASGR----------QAHATVLDINGSMLGVGAERAEK----KKLSGNLTFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAEELP E S+ AYTIAFGIRNV RID ALSEAYRVLK GGR L LEFS V+ +L
Sbjct: 128 EANAEELPFEPASFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLL 186
>sp|C3MCY6|UBIE_RHISN Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium sp. (strain NGR234) GN=ubiE PE=3 SV=1
Length = 258
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 75/120 (62%), Gaps = 14/120 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RAR K + N L F+
Sbjct: 82 GDIAFRIVE----------ASGRKAHATVLDINGSMLAVGAERARK--KGLLGN--LEFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
EANAE+LP ++S+ AYTIAFGIRNV RI+ AL EAYRVLK GGR L LEFS V +L
Sbjct: 128 EANAEDLPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLD 187
>sp|B3Q619|UBIE_RHOPT Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodopseudomonas palustris (strain TIE-1) GN=ubiE
PE=3 SV=1
Length = 253
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 72/117 (61%), Gaps = 18/117 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA--RDLFKVPVPNPRLR 68
GDI+FR + H TV DIN ML+VG QRA R+L + ++
Sbjct: 77 GDISFRAAK----------ASGAGFHSTVCDINTDMLEVGRQRAVERNL------DDKVD 120
Query: 69 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
F+E NAE L + S+ AYTIAFGIRNV RID AL EAYRVLKPG RFLCLEFS V+
Sbjct: 121 FVEGNAESLQFDDRSFDAYTIAFGIRNVPRIDLALKEAYRVLKPGSRFLCLEFSSVD 177
>sp|Q6NDM2|UBIE_RHOPA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=ubiE PE=3 SV=1
Length = 253
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 72/117 (61%), Gaps = 18/117 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA--RDLFKVPVPNPRLR 68
GDI+FR + H TV DIN ML+VG QRA R+L + ++
Sbjct: 77 GDISFRAAK----------ASGAGFHSTVCDINTDMLEVGRQRAVERNL------DDKVD 120
Query: 69 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
F+E NAE L + S+ AYTIAFGIRNV RID AL EAYRVLKPG RFLCLEFS V+
Sbjct: 121 FVEGNAESLQFDDRSFDAYTIAFGIRNVPRIDLALKEAYRVLKPGSRFLCLEFSSVD 177
>sp|Q9LVC8|COQ5_ARATH 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1
Length = 288
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 76/123 (61%), Gaps = 13/123 (10%)
Query: 10 PGDIAFRFLNYV--------DKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVP 61
GD+AFR + V K+ +L E + V DIN ML+VG+QRA + +
Sbjct: 94 TGDVAFRIYDAVYSVKRRALQKVDEASLEE---TQIYVCDINPNMLNVGKQRAAE--RGL 148
Query: 62 VPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121
N L ++E +AE L + +S YTIAFGIRNVT I+KAL+EAYRVLK GGRFLCLE
Sbjct: 149 RDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208
Query: 122 SHV 124
SHV
Sbjct: 209 SHV 211
>sp|Q92SK7|UBIE_RHIME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium meliloti (strain 1021) GN=ubiE PE=3 SV=2
Length = 258
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 72/120 (60%), Gaps = 14/120 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + H TV DIN +ML VG +RAR L F+
Sbjct: 82 GDIAFRIVERSGR----------KAHATVLDINGSMLSVGAERARK----KGIEANLDFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
EANAE+LP ++S+ AYTIAFGIRNV RI+ AL EAYRVLK GGR L LEFS V +L
Sbjct: 128 EANAEDLPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLD 187
>sp|Q5JNC0|COQ5_ORYSJ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1
Length = 294
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 11 GDIAFRFLNYVDKLP----PNTLSE-HCAPHVTVADINRAMLDVGEQRARDLFKVPVPNP 65
GD+AFR L ++ + TL++ + V DIN ML+VG++RA + +
Sbjct: 101 GDVAFRALERINSVSHRAMQGTLTDIEEETQIYVCDINPNMLNVGKKRASE--RGYKEGH 158
Query: 66 RLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
L +++ +AE L E S YTIAFGIRNVT I+KALSEAYRVLK GGRFLCLE SHV+
Sbjct: 159 CLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLELSHVD 218
>sp|A6UFF7|UBIE_SINMW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Sinorhizobium medicae (strain WSM419) GN=ubiE PE=3
SV=1
Length = 258
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 71/119 (59%), Gaps = 14/119 (11%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR + + TV DIN +ML VG +RAR L F+
Sbjct: 82 GDIAFRIVERSGR----------KAQATVLDINGSMLSVGAERARK----KGIEANLEFV 127
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
EANAE+LP ++S+ AYTIAFGIRNV RI+ AL EAYRVLK GGR L LEFS V +L
Sbjct: 128 EANAEDLPFAANSFDAYTIAFGIRNVPRIEVALREAYRVLKRGGRLLVLEFSEVEMPLL 186
>sp|A4YJH0|UBIE_BRASO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bradyrhizobium sp. (strain ORS278) GN=ubiE PE=3 SV=1
Length = 253
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 68/114 (59%), Gaps = 14/114 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDI+FR H TV DIN ML+VG QRA + + R+ F+
Sbjct: 77 GDISFRAAK----------KAGAGFHATVCDINGDMLEVGRQRALKQYL----DDRVSFV 122
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
E NAE L S+ AYTIAFGIRNV +ID AL+EAYRVLK GGRFLCLEFS V
Sbjct: 123 EGNAESLAFPDRSFDAYTIAFGIRNVPQIDLALAEAYRVLKHGGRFLCLEFSTV 176
>sp|P49017|COQ5_YEAST 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ5 PE=1 SV=1
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAF L++ + +T S + + DIN ML GE+RA + K +PR+RFL
Sbjct: 123 GDIAFGLLDHAESKFGDTEST-----MDIVDINPDMLKEGEKRAMEQGKY-FKDPRVRFL 176
Query: 71 EANAEELP-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSML 129
+N E+L I+SDS YT++FGIRN T I K L+ AYRVLKPGG F CLEFS + N ++
Sbjct: 177 VSNGEKLEEIDSDSKDIYTVSFGIRNFTDIQKGLNTAYRVLKPGGIFYCLEFSKIENPLM 236
Query: 130 -----QW 131
QW
Sbjct: 237 DFAYQQW 243
>sp|Q9X3X2|UBIE_ZYMMO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 /
ZM4 / CP4) GN=ubiE PE=3 SV=2
Length = 242
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 68/117 (58%), Gaps = 18/117 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFR Y +VT+ADIN AML+VG++RA + L +
Sbjct: 70 GDIAFRLAKY-------------GTNVTIADINPAMLEVGKKRA-----IARSIENLTWK 111
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNS 127
E NAE L + + AYTIAFGIRNVT I KAL EA+RVLK GGRF C+EFS S
Sbjct: 112 EENAEALSFNDNVFDAYTIAFGIRNVTHIQKALDEAWRVLKVGGRFFCMEFSQTKWS 168
>sp|Q13EN8|UBIE_RHOPS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodopseudomonas palustris (strain BisB5) GN=ubiE
PE=3 SV=1
Length = 253
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 69/117 (58%), Gaps = 18/117 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA--RDLFKVPVPNPRLR 68
GDI+FR + TV DIN ML+VG QRA R L + ++
Sbjct: 77 GDISFRAAK----------ASGAGFQATVCDINTDMLEVGRQRAVQRHL------DGQVD 120
Query: 69 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
F+E NAE L SY AYTIAFGIRNV RID AL EAYRVLKPG RFLCLEFS V+
Sbjct: 121 FVEGNAEALQFPDRSYDAYTIAFGIRNVPRIDLALKEAYRVLKPGSRFLCLEFSSVD 177
>sp|Q2J2H9|UBIE_RHOP2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodopseudomonas palustris (strain HaA2) GN=ubiE PE=3
SV=1
Length = 253
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 69/117 (58%), Gaps = 18/117 (15%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA--RDLFKVPVPNPRLR 68
GDI+FR + TV DIN ML+VG QRA R L + ++
Sbjct: 77 GDISFRAAK----------ASGAGFQATVCDINTDMLEVGRQRAVERHL------DGQVE 120
Query: 69 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125
F+E NAE L SY AYTIAFGIRNV RID AL EA+RVLKPG RFLCLEFS V+
Sbjct: 121 FVEGNAEALQFPDKSYDAYTIAFGIRNVPRIDLALKEAHRVLKPGSRFLCLEFSSVD 177
>sp|B9KQJ8|UBIE_RHOSK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085)
GN=ubiE PE=3 SV=1
Length = 250
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDI+FRFL K P TV D+ +ML G QRA D ++ RL ++
Sbjct: 75 GDISFRFL----KRAPGA-------EATVCDMTESMLVEGRQRA-DAAQMA---DRLDWV 119
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
+A LP S+++ YTI+FGIRNVTR+ AL+EAYRVLKPGGR + LEFS + N M+Q
Sbjct: 120 VGDAMALPFASNTFDVYTISFGIRNVTRVQDALNEAYRVLKPGGRLMVLEFSQLPNPMMQ 179
Query: 131 W 131
W
Sbjct: 180 W 180
>sp|Q3IY65|UBIE_RHOS4 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
NCIB 8253 / DSM 158) GN=ubiE PE=3 SV=1
Length = 250
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDI+FRFL K P TV D+ +ML G QRA D ++ RL ++
Sbjct: 75 GDISFRFL----KRAPGA-------EATVCDMTESMLVEGRQRA-DAAQMA---DRLDWV 119
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
+A LP S+++ YTI+FGIRNVTR+ AL+EAYRVLKPGGR + LEFS + N M+Q
Sbjct: 120 VGDAMALPFASNTFDVYTISFGIRNVTRVQDALNEAYRVLKPGGRLMVLEFSQLPNPMMQ 179
Query: 131 W 131
W
Sbjct: 180 W 180
>sp|A3PFL1|UBIE_RHOS1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=ubiE PE=3 SV=1
Length = 250
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDI+FRFL K P TV D+ +ML G QRA D ++ RL ++
Sbjct: 75 GDISFRFL----KRAPGA-------EATVCDMTESMLVEGRQRA-DAAQMA---DRLDWV 119
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
+A LP S+++ YTI+FGIRNVTR+ AL+EAYRVLKPGGR + LEFS + N M+Q
Sbjct: 120 VGDAMALPFASNTFDVYTISFGIRNVTRVQDALNEAYRVLKPGGRLMVLEFSQLPNPMMQ 179
Query: 131 W 131
W
Sbjct: 180 W 180
>sp|A4WVR7|UBIE_RHOS5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=ubiE PE=3 SV=1
Length = 250
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDI+FRFL K P H TV D+ +ML G QRA D ++ RL ++
Sbjct: 75 GDISFRFL----KRAPGA-------HATVCDMTESMLVEGRQRA-DAAQMA---DRLDWV 119
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
+A LP S+++ YTI+FGIRNVTR+ AL+EA+RVLKPGGR + LEFS + N +Q
Sbjct: 120 VGDAMALPFASNTFDVYTISFGIRNVTRVQDALNEAFRVLKPGGRLMVLEFSQLPNPAMQ 179
Query: 131 W 131
W
Sbjct: 180 W 180
>sp|A5E888|UBIE_BRASB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=ubiE PE=3 SV=1
Length = 253
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 36 HVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRN 95
H TV DIN ML+VG QRA + ++ F+E NAE+L S+ AYTIAFGIRN
Sbjct: 92 HATVCDINGDMLEVGRQRALKQYL----EDKVSFVEGNAEKLAFPDRSFDAYTIAFGIRN 147
Query: 96 VTRIDKALSEAYRVLKPGGRFLCLEFSHV 124
V +I+ AL+EAYRVLK GGRFLCLEFS V
Sbjct: 148 VPQIELALAEAYRVLKHGGRFLCLEFSTV 176
>sp|A1BAN1|UBIE_PARDP Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Paracoccus denitrificans (strain Pd 1222) GN=ubiE
PE=3 SV=1
Length = 250
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 11 GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL 70
GDIAFRFL D+ P VTV D+ +ML G +RA + RL ++
Sbjct: 75 GDIAFRFL---DRAP--------GARVTVCDMTESMLVEGRKRA----EAGKQADRLAWV 119
Query: 71 EANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNSMLQ 130
+A LP DS+ YTI+FGIRNVTRI AL+EA RVL+PGGR + LEFS + MLQ
Sbjct: 120 TGDAMALPFADDSFDRYTISFGIRNVTRIPDALAEARRVLRPGGRLMVLEFSQMPVPMLQ 179
Query: 131 W 131
W
Sbjct: 180 W 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,148,009
Number of Sequences: 539616
Number of extensions: 1791257
Number of successful extensions: 7313
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 6671
Number of HSP's gapped (non-prelim): 594
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)