Query psy890
Match_columns 131
No_of_seqs 121 out of 1298
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 22:21:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.7E-22 1.3E-26 134.9 11.3 111 1-126 72-184 (261)
2 1vl5_A Unknown conserved prote 99.9 2.3E-21 7.9E-26 130.4 12.7 107 1-125 39-145 (260)
3 3dh0_A SAM dependent methyltra 99.9 1.6E-20 5.5E-25 123.2 13.1 109 2-125 40-148 (219)
4 1xxl_A YCGJ protein; structura 99.9 1.8E-20 6.2E-25 124.8 13.0 107 1-125 23-129 (239)
5 3dlc_A Putative S-adenosyl-L-m 99.8 1.7E-20 5.8E-25 122.7 12.3 105 2-122 46-150 (219)
6 4hg2_A Methyltransferase type 99.8 2.8E-21 9.5E-26 130.3 8.5 99 2-125 42-140 (257)
7 2o57_A Putative sarcosine dime 99.8 3.3E-20 1.1E-24 126.9 12.7 108 1-124 84-191 (297)
8 3kkz_A Uncharacterized protein 99.8 3.6E-20 1.2E-24 125.1 12.6 105 1-122 48-152 (267)
9 1nkv_A Hypothetical protein YJ 99.8 2.5E-20 8.6E-25 124.9 11.4 105 1-122 38-142 (256)
10 3bus_A REBM, methyltransferase 99.8 4.5E-20 1.6E-24 124.7 12.5 107 1-123 63-169 (273)
11 3dtn_A Putative methyltransfer 99.8 2.4E-20 8.1E-25 123.6 10.6 107 1-126 46-154 (234)
12 3f4k_A Putative methyltransfer 99.8 5.8E-20 2E-24 123.2 12.3 104 2-122 49-152 (257)
13 3mgg_A Methyltransferase; NYSG 99.8 6.4E-20 2.2E-24 124.2 12.3 106 1-122 39-144 (276)
14 3g5t_A Trans-aconitate 3-methy 99.8 4.5E-20 1.5E-24 126.5 11.5 108 1-123 38-152 (299)
15 3sm3_A SAM-dependent methyltra 99.8 1.1E-19 3.8E-24 120.0 12.9 111 1-124 32-145 (235)
16 4htf_A S-adenosylmethionine-de 99.8 4.8E-20 1.6E-24 125.5 11.2 104 2-122 71-175 (285)
17 3ujc_A Phosphoethanolamine N-m 99.8 6.8E-20 2.3E-24 123.2 10.9 106 1-125 57-164 (266)
18 1pjz_A Thiopurine S-methyltran 99.8 3.5E-20 1.2E-24 120.9 9.2 102 1-119 24-139 (203)
19 3gu3_A Methyltransferase; alph 99.8 1.2E-19 4.1E-24 123.7 11.6 105 1-122 24-128 (284)
20 4fsd_A Arsenic methyltransfera 99.8 1.2E-19 4.3E-24 128.3 11.9 109 2-123 86-206 (383)
21 3h2b_A SAM-dependent methyltra 99.8 9.4E-20 3.2E-24 118.4 10.5 102 1-125 43-146 (203)
22 3vc1_A Geranyl diphosphate 2-C 99.8 2.3E-19 7.8E-24 123.7 12.6 106 2-124 120-225 (312)
23 2p8j_A S-adenosylmethionine-de 99.8 2.2E-19 7.4E-24 117.0 11.5 106 2-125 26-133 (209)
24 3hnr_A Probable methyltransfer 99.8 2.1E-19 7.2E-24 117.9 11.5 100 1-123 47-148 (220)
25 3g5l_A Putative S-adenosylmeth 99.8 2E-19 6.7E-24 120.5 11.6 101 1-121 46-146 (253)
26 3ofk_A Nodulation protein S; N 99.8 2E-19 6.9E-24 117.8 11.3 100 2-122 54-156 (216)
27 2xvm_A Tellurite resistance pr 99.8 3.8E-19 1.3E-23 114.9 12.4 103 2-123 35-139 (199)
28 2p7i_A Hypothetical protein; p 99.8 1.8E-19 6E-24 119.9 10.8 99 2-123 45-144 (250)
29 3l8d_A Methyltransferase; stru 99.8 2.5E-19 8.5E-24 119.1 11.5 103 1-124 55-157 (242)
30 2yqz_A Hypothetical protein TT 99.8 3E-19 1E-23 119.9 11.8 99 2-119 42-140 (263)
31 3jwh_A HEN1; methyltransferase 99.8 1.5E-19 5E-24 118.7 9.5 110 1-121 31-142 (217)
32 3lcc_A Putative methyl chlorid 99.8 2E-19 6.7E-24 119.4 9.9 105 2-124 69-175 (235)
33 3ocj_A Putative exported prote 99.8 2E-19 6.9E-24 123.7 10.3 108 2-124 121-231 (305)
34 3hem_A Cyclopropane-fatty-acyl 99.8 6.5E-19 2.2E-23 120.9 12.7 106 1-125 74-188 (302)
35 3jwg_A HEN1, methyltransferase 99.8 2E-19 6.7E-24 118.1 9.7 111 1-122 31-143 (219)
36 2ex4_A Adrenal gland protein A 99.8 3.7E-19 1.3E-23 118.5 10.8 106 2-124 82-189 (241)
37 2p35_A Trans-aconitate 2-methy 99.8 5E-19 1.7E-23 118.6 11.5 99 2-122 36-134 (259)
38 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3.4E-19 1.2E-23 119.2 10.4 102 2-122 96-199 (254)
39 1kpg_A CFA synthase;, cyclopro 99.8 1.2E-18 4.2E-23 118.6 13.1 105 1-124 66-172 (287)
40 2gb4_A Thiopurine S-methyltran 99.8 4.3E-19 1.5E-23 119.3 10.6 102 2-120 71-191 (252)
41 3ou2_A SAM-dependent methyltra 99.8 8.4E-19 2.9E-23 114.7 11.3 100 2-124 49-150 (218)
42 2aot_A HMT, histamine N-methyl 99.8 3.2E-19 1.1E-23 122.0 9.3 110 2-123 55-175 (292)
43 3i9f_A Putative type 11 methyl 99.8 8.9E-19 3.1E-23 110.8 10.3 98 2-125 20-117 (170)
44 3mti_A RRNA methylase; SAM-dep 99.8 1.1E-18 3.6E-23 111.9 10.6 106 1-124 24-139 (185)
45 3ccf_A Cyclopropane-fatty-acyl 99.8 1.4E-18 4.8E-23 118.0 11.3 99 1-123 59-157 (279)
46 3g07_A 7SK snRNA methylphospha 99.8 6.3E-19 2.2E-23 120.7 9.7 107 2-119 49-219 (292)
47 3bkw_A MLL3908 protein, S-aden 99.8 1.5E-18 5E-23 115.3 11.1 101 1-121 45-145 (243)
48 1ve3_A Hypothetical protein PH 99.8 1.6E-18 5.5E-23 114.1 11.1 102 2-122 41-144 (227)
49 3ege_A Putative methyltransfer 99.8 4.6E-19 1.6E-23 119.4 8.6 99 1-124 36-134 (261)
50 2gs9_A Hypothetical protein TT 99.8 1.6E-18 5.6E-23 113.1 10.7 98 1-123 38-135 (211)
51 2fk8_A Methoxy mycolic acid sy 99.8 4.4E-18 1.5E-22 117.5 13.3 106 1-125 92-199 (318)
52 3dp7_A SAM-dependent methyltra 99.8 3.7E-18 1.2E-22 120.1 12.6 107 2-125 182-292 (363)
53 3i53_A O-methyltransferase; CO 99.8 4.3E-18 1.5E-22 118.3 12.8 106 2-125 172-279 (332)
54 3e23_A Uncharacterized protein 99.8 2.2E-18 7.6E-23 112.5 10.7 97 2-123 46-144 (211)
55 1ri5_A MRNA capping enzyme; me 99.8 2.9E-18 9.8E-23 117.0 11.6 105 2-122 67-176 (298)
56 2pxx_A Uncharacterized protein 99.8 1.7E-18 5.9E-23 112.9 10.0 105 1-124 44-163 (215)
57 3eey_A Putative rRNA methylase 99.8 3E-18 1E-22 110.8 10.9 109 1-123 24-142 (197)
58 3thr_A Glycine N-methyltransfe 99.8 1.8E-18 6.1E-23 118.0 10.2 106 2-121 60-176 (293)
59 3bkx_A SAM-dependent methyltra 99.8 3.4E-18 1.1E-22 115.7 11.4 111 1-125 45-164 (275)
60 3fpf_A Mtnas, putative unchara 99.8 6.2E-18 2.1E-22 115.4 12.4 101 1-122 124-224 (298)
61 3m70_A Tellurite resistance pr 99.8 7E-18 2.4E-22 114.8 12.8 101 2-122 123-225 (286)
62 2kw5_A SLR1183 protein; struct 99.8 4.1E-18 1.4E-22 110.5 11.1 104 2-124 32-135 (202)
63 1zx0_A Guanidinoacetate N-meth 99.8 7.7E-19 2.6E-23 116.7 7.0 103 2-122 63-172 (236)
64 3gwz_A MMCR; methyltransferase 99.8 1.2E-17 4E-22 117.7 13.0 106 2-125 205-312 (369)
65 3ggd_A SAM-dependent methyltra 99.8 2.1E-18 7E-23 115.0 8.7 104 1-125 58-168 (245)
66 3dxy_A TRNA (guanine-N(7)-)-me 99.8 3.3E-18 1.1E-22 112.8 9.2 103 2-120 37-150 (218)
67 3pfg_A N-methyltransferase; N, 99.8 4.1E-18 1.4E-22 114.7 9.9 96 2-121 53-152 (263)
68 1y8c_A S-adenosylmethionine-de 99.8 7.2E-18 2.5E-22 112.0 10.9 99 2-120 40-142 (246)
69 1yzh_A TRNA (guanine-N(7)-)-me 99.8 1.7E-17 5.7E-22 108.8 12.5 103 2-120 44-156 (214)
70 2vdw_A Vaccinia virus capping 99.8 6.7E-18 2.3E-22 116.2 10.8 109 2-122 51-171 (302)
71 3e05_A Precorrin-6Y C5,15-meth 99.8 2.6E-17 8.8E-22 107.1 13.0 102 2-122 43-144 (204)
72 3dli_A Methyltransferase; PSI- 99.8 5E-18 1.7E-22 112.9 9.8 97 1-123 43-143 (240)
73 2fca_A TRNA (guanine-N(7)-)-me 99.8 1E-17 3.5E-22 109.9 11.1 103 2-120 41-153 (213)
74 2r3s_A Uncharacterized protein 99.8 7.1E-18 2.4E-22 117.1 10.6 107 2-125 168-276 (335)
75 3p9n_A Possible methyltransfer 99.8 1.4E-17 4.8E-22 107.2 11.0 104 2-122 47-155 (189)
76 2qe6_A Uncharacterized protein 99.8 2E-17 6.8E-22 112.4 12.3 104 2-123 80-199 (274)
77 1x19_A CRTF-related protein; m 99.7 2.3E-17 7.9E-22 115.7 12.4 106 2-125 193-300 (359)
78 1xdz_A Methyltransferase GIDB; 99.7 1.5E-17 5.1E-22 110.8 10.6 99 2-120 73-174 (240)
79 2a14_A Indolethylamine N-methy 99.7 5.3E-18 1.8E-22 114.5 8.5 109 2-122 58-199 (263)
80 2ip2_A Probable phenazine-spec 99.7 1E-17 3.5E-22 116.4 10.1 106 2-125 170-277 (334)
81 3g2m_A PCZA361.24; SAM-depende 99.7 1.5E-17 5E-22 114.0 10.6 105 2-124 85-194 (299)
82 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.7E-17 5.7E-22 105.5 9.9 102 2-123 28-130 (178)
83 2i62_A Nicotinamide N-methyltr 99.7 1.2E-17 4.2E-22 112.1 9.7 109 2-122 59-200 (265)
84 3mcz_A O-methyltransferase; ad 99.7 1.8E-17 6.1E-22 115.9 10.9 108 2-125 182-292 (352)
85 3e8s_A Putative SAM dependent 99.7 1.3E-17 4.3E-22 109.5 9.3 98 1-123 54-155 (227)
86 3bgv_A MRNA CAP guanine-N7 met 99.7 2.5E-17 8.5E-22 113.5 11.1 109 2-122 37-157 (313)
87 1qzz_A RDMB, aclacinomycin-10- 99.7 3.3E-17 1.1E-21 115.3 11.8 102 2-121 185-288 (374)
88 2avn_A Ubiquinone/menaquinone 99.7 2.4E-17 8.2E-22 110.9 10.5 98 1-122 56-154 (260)
89 2g72_A Phenylethanolamine N-me 99.7 1.5E-17 5.2E-22 113.4 9.6 107 2-120 74-215 (289)
90 1dus_A MJ0882; hypothetical pr 99.7 5.4E-17 1.8E-21 104.1 11.5 105 2-123 55-160 (194)
91 3bxo_A N,N-dimethyltransferase 99.7 2.4E-17 8.1E-22 109.2 9.8 99 2-124 43-145 (239)
92 3orh_A Guanidinoacetate N-meth 99.7 9.9E-18 3.4E-22 111.6 7.9 101 2-120 63-170 (236)
93 3njr_A Precorrin-6Y methylase; 99.7 1.1E-16 3.8E-21 104.4 12.7 100 1-122 57-156 (204)
94 3q7e_A Protein arginine N-meth 99.7 4.5E-17 1.5E-21 114.0 11.5 100 2-118 69-171 (349)
95 3u81_A Catechol O-methyltransf 99.7 1.9E-17 6.4E-22 109.1 8.9 107 2-123 61-173 (221)
96 3lbf_A Protein-L-isoaspartate 99.7 6E-17 2.1E-21 105.6 10.7 98 1-122 79-176 (210)
97 1nt2_A Fibrillarin-like PRE-rR 99.7 8E-17 2.7E-21 105.6 11.0 99 1-120 59-161 (210)
98 3ckk_A TRNA (guanine-N(7)-)-me 99.7 6.8E-17 2.3E-21 107.6 10.6 103 2-120 49-168 (235)
99 2fyt_A Protein arginine N-meth 99.7 6.5E-17 2.2E-21 112.9 10.9 99 2-117 67-168 (340)
100 3cgg_A SAM-dependent methyltra 99.7 1.1E-16 3.7E-21 102.7 11.0 100 1-123 48-150 (195)
101 4df3_A Fibrillarin-like rRNA/T 99.7 1.3E-16 4.3E-21 105.9 11.5 101 1-120 79-182 (233)
102 3g89_A Ribosomal RNA small sub 99.7 7.9E-17 2.7E-21 108.1 10.5 100 2-121 83-185 (249)
103 2ift_A Putative methylase HI07 99.7 6.6E-17 2.3E-21 105.2 9.6 106 2-124 56-167 (201)
104 3dr5_A Putative O-methyltransf 99.7 5.6E-17 1.9E-21 107.1 9.2 102 2-120 59-163 (221)
105 3dmg_A Probable ribosomal RNA 99.7 9.5E-17 3.2E-21 113.5 10.8 100 2-120 236-340 (381)
106 3lpm_A Putative methyltransfer 99.7 9.2E-17 3.2E-21 108.1 10.2 103 2-120 52-176 (259)
107 1tw3_A COMT, carminomycin 4-O- 99.7 1.3E-16 4.3E-21 111.9 11.2 103 2-122 186-290 (360)
108 3d2l_A SAM-dependent methyltra 99.7 1.2E-16 4.2E-21 106.0 10.6 97 2-119 36-136 (243)
109 3cc8_A Putative methyltransfer 99.7 1.3E-16 4.3E-21 104.9 10.6 97 1-122 34-132 (230)
110 1fbn_A MJ fibrillarin homologu 99.7 1.7E-16 6E-21 105.0 11.2 95 1-119 76-177 (230)
111 1jsx_A Glucose-inhibited divis 99.7 2.2E-16 7.4E-21 102.7 11.4 98 2-120 68-165 (207)
112 3tfw_A Putative O-methyltransf 99.7 1.7E-16 5.6E-21 106.4 10.9 105 1-122 65-172 (248)
113 1wzn_A SAM-dependent methyltra 99.7 1.6E-16 5.5E-21 106.2 10.7 98 2-119 44-144 (252)
114 1af7_A Chemotaxis receptor met 99.7 1.5E-16 5.1E-21 108.0 10.4 110 2-118 108-250 (274)
115 3r0q_C Probable protein argini 99.7 9.2E-17 3.2E-21 113.5 9.7 102 1-120 65-169 (376)
116 3uwp_A Histone-lysine N-methyl 99.7 4.8E-17 1.6E-21 115.2 8.0 112 1-127 175-295 (438)
117 3lst_A CALO1 methyltransferase 99.7 1.1E-16 3.6E-21 112.0 9.4 103 2-125 187-291 (348)
118 2ozv_A Hypothetical protein AT 99.7 2.4E-16 8.3E-21 106.3 10.8 104 2-120 39-170 (260)
119 1vlm_A SAM-dependent methyltra 99.7 2.8E-16 9.5E-21 103.2 10.8 94 1-123 49-142 (219)
120 3ntv_A MW1564 protein; rossman 99.7 2.2E-16 7.5E-21 104.8 10.2 101 2-120 74-176 (232)
121 1g6q_1 HnRNP arginine N-methyl 99.7 3.1E-16 1.1E-20 109.0 11.3 99 2-117 41-142 (328)
122 4e2x_A TCAB9; kijanose, tetron 99.7 1.1E-17 3.9E-22 119.3 4.1 101 1-121 109-209 (416)
123 3fzg_A 16S rRNA methylase; met 99.7 2.6E-17 8.9E-22 105.6 5.3 102 1-120 51-152 (200)
124 3mb5_A SAM-dependent methyltra 99.7 3.2E-16 1.1E-20 105.0 10.8 102 1-122 95-196 (255)
125 1yb2_A Hypothetical protein TA 99.7 3.1E-16 1.1E-20 106.4 10.5 101 1-122 112-213 (275)
126 3grz_A L11 mtase, ribosomal pr 99.7 1.7E-16 5.7E-21 103.2 8.9 102 1-124 62-163 (205)
127 3evz_A Methyltransferase; NYSG 99.7 6.3E-16 2.1E-20 102.1 11.7 103 1-121 57-180 (230)
128 2fpo_A Methylase YHHF; structu 99.7 5.1E-16 1.7E-20 101.1 11.0 103 2-122 57-162 (202)
129 3iv6_A Putative Zn-dependent a 99.7 3.3E-16 1.1E-20 105.6 10.4 99 2-120 48-148 (261)
130 2esr_A Methyltransferase; stru 99.7 1.5E-16 5.3E-21 101.1 8.0 106 2-124 34-142 (177)
131 2pwy_A TRNA (adenine-N(1)-)-me 99.7 5.7E-16 2E-20 103.7 11.0 101 2-122 99-200 (258)
132 2yxe_A Protein-L-isoaspartate 99.7 8.4E-16 2.9E-20 100.5 11.5 101 1-122 79-179 (215)
133 3c3p_A Methyltransferase; NP_9 99.7 2.8E-16 9.7E-21 102.6 9.0 101 2-120 59-160 (210)
134 3gdh_A Trimethylguanosine synt 99.7 4.5E-18 1.5E-22 113.2 0.2 99 1-117 80-178 (241)
135 2fhp_A Methylase, putative; al 99.7 2.3E-16 7.8E-21 100.9 8.2 105 2-123 47-157 (187)
136 4a6d_A Hydroxyindole O-methylt 99.7 1.1E-15 3.9E-20 107.1 12.3 105 2-125 182-288 (353)
137 3htx_A HEN1; HEN1, small RNA m 99.7 5.1E-16 1.8E-20 117.4 11.0 109 2-121 724-835 (950)
138 1o9g_A RRNA methyltransferase; 99.7 2.4E-16 8.4E-21 105.5 8.5 107 2-123 54-217 (250)
139 3m33_A Uncharacterized protein 99.7 1.6E-16 5.5E-21 104.9 7.5 88 1-117 50-139 (226)
140 3mq2_A 16S rRNA methyltransfer 99.7 1.3E-16 4.3E-21 104.7 6.8 101 2-119 30-139 (218)
141 2ipx_A RRNA 2'-O-methyltransfe 99.7 7.5E-16 2.6E-20 102.1 10.6 99 2-119 80-181 (233)
142 3tr6_A O-methyltransferase; ce 99.7 3.7E-16 1.3E-20 102.8 8.8 104 2-122 67-176 (225)
143 1i9g_A Hypothetical protein RV 99.7 7.9E-16 2.7E-20 104.4 10.7 102 2-122 102-205 (280)
144 2frn_A Hypothetical protein PH 99.7 6.6E-16 2.3E-20 105.1 10.2 101 2-123 128-228 (278)
145 1dl5_A Protein-L-isoaspartate 99.7 9.3E-16 3.2E-20 106.1 11.1 100 1-121 77-176 (317)
146 1vbf_A 231AA long hypothetical 99.7 1.3E-15 4.5E-20 100.5 11.2 96 2-123 73-168 (231)
147 2gpy_A O-methyltransferase; st 99.7 6.4E-16 2.2E-20 102.4 9.6 102 2-121 57-161 (233)
148 3duw_A OMT, O-methyltransferas 99.7 7E-16 2.4E-20 101.5 9.7 104 2-122 61-169 (223)
149 2yxd_A Probable cobalt-precorr 99.7 1.4E-15 4.7E-20 96.7 10.8 96 2-122 38-133 (183)
150 1i1n_A Protein-L-isoaspartate 99.7 1.6E-15 5.4E-20 99.9 11.2 103 1-123 79-185 (226)
151 2pjd_A Ribosomal RNA small sub 99.7 5.6E-16 1.9E-20 108.2 9.4 102 2-122 199-305 (343)
152 3r3h_A O-methyltransferase, SA 99.7 7.2E-17 2.5E-21 107.8 4.7 104 2-122 63-172 (242)
153 4dzr_A Protein-(glutamine-N5) 99.7 3.6E-17 1.2E-21 106.5 3.0 104 2-123 33-167 (215)
154 4dcm_A Ribosomal RNA large sub 99.7 1.4E-15 4.8E-20 107.4 11.3 106 2-121 225-335 (375)
155 2b3t_A Protein methyltransfera 99.7 1E-15 3.6E-20 103.8 10.1 101 2-119 112-237 (276)
156 1l3i_A Precorrin-6Y methyltran 99.6 1.1E-15 3.9E-20 97.7 9.7 101 1-122 35-136 (192)
157 1fp1_D Isoliquiritigenin 2'-O- 99.6 3.6E-16 1.2E-20 110.2 7.9 98 2-125 212-311 (372)
158 3reo_A (ISO)eugenol O-methyltr 99.6 6.3E-16 2.1E-20 108.9 9.0 98 2-125 206-305 (368)
159 3p2e_A 16S rRNA methylase; met 99.6 2.4E-16 8.1E-21 104.3 6.5 101 2-118 27-137 (225)
160 1fp2_A Isoflavone O-methyltran 99.6 4.6E-16 1.6E-20 108.9 8.3 98 2-125 191-293 (352)
161 1p91_A Ribosomal RNA large sub 99.6 1.7E-15 5.8E-20 102.2 10.6 95 2-124 88-182 (269)
162 2vdv_E TRNA (guanine-N(7)-)-me 99.6 2.3E-15 7.9E-20 100.6 11.1 102 2-119 52-172 (246)
163 1u2z_A Histone-lysine N-methyl 99.6 1.1E-15 3.9E-20 109.3 10.2 109 1-124 244-363 (433)
164 2y1w_A Histone-arginine methyl 99.6 2E-15 6.8E-20 105.7 11.0 100 1-118 52-153 (348)
165 1o54_A SAM-dependent O-methylt 99.6 1.7E-15 5.8E-20 102.8 10.1 101 2-122 115-215 (277)
166 3p9c_A Caffeic acid O-methyltr 99.6 8.7E-16 3E-20 108.1 8.9 98 2-125 204-303 (364)
167 1sui_A Caffeoyl-COA O-methyltr 99.6 8E-16 2.7E-20 103.1 8.3 102 2-120 82-190 (247)
168 1g8a_A Fibrillarin-like PRE-rR 99.6 5E-15 1.7E-19 97.6 11.7 98 2-119 76-177 (227)
169 1ixk_A Methyltransferase; open 99.6 3.7E-15 1.3E-19 103.1 11.5 107 2-123 121-249 (315)
170 3a27_A TYW2, uncharacterized p 99.6 2.8E-15 9.4E-20 101.7 10.3 101 2-123 122-222 (272)
171 4hc4_A Protein arginine N-meth 99.6 2.6E-15 9E-20 105.8 10.2 98 2-117 86-186 (376)
172 1ej0_A FTSJ; methyltransferase 99.6 7.2E-16 2.5E-20 97.3 6.6 98 2-125 25-141 (180)
173 3giw_A Protein of unknown func 99.6 1.9E-15 6.7E-20 102.1 9.0 108 2-124 81-204 (277)
174 3cbg_A O-methyltransferase; cy 99.6 2.5E-15 8.5E-20 99.7 9.3 104 2-122 75-184 (232)
175 1r18_A Protein-L-isoaspartate( 99.6 2.6E-15 9E-20 99.1 9.3 104 1-121 86-195 (227)
176 3q87_B N6 adenine specific DNA 99.6 1E-15 3.5E-20 97.1 7.0 93 2-124 26-127 (170)
177 3id6_C Fibrillarin-like rRNA/T 99.6 1.1E-14 3.7E-19 96.7 12.0 100 1-120 78-181 (232)
178 1ws6_A Methyltransferase; stru 99.6 6.7E-16 2.3E-20 97.4 5.9 102 2-124 44-151 (171)
179 3tma_A Methyltransferase; thum 99.6 1.1E-14 3.8E-19 102.0 12.5 106 2-122 206-319 (354)
180 3bzb_A Uncharacterized protein 99.6 9.7E-15 3.3E-19 99.4 11.7 106 2-119 82-204 (281)
181 3c3y_A Pfomt, O-methyltransfer 99.6 2.4E-15 8.1E-20 100.2 8.3 102 2-120 73-181 (237)
182 3sso_A Methyltransferase; macr 99.6 7.7E-16 2.6E-20 108.7 6.1 98 1-123 218-327 (419)
183 3gjy_A Spermidine synthase; AP 99.6 4E-15 1.4E-19 102.6 9.5 106 1-122 91-202 (317)
184 2yvl_A TRMI protein, hypotheti 99.6 1.4E-14 4.8E-19 96.4 11.9 99 2-122 94-192 (248)
185 3bwc_A Spermidine synthase; SA 99.6 3.7E-15 1.3E-19 102.6 9.1 105 2-120 98-210 (304)
186 3ajd_A Putative methyltransfer 99.6 6.6E-15 2.3E-19 99.9 10.2 108 1-123 85-214 (274)
187 2pbf_A Protein-L-isoaspartate 99.6 5.5E-15 1.9E-19 97.4 9.5 105 1-121 82-194 (227)
188 2hnk_A SAM-dependent O-methylt 99.6 2.4E-15 8.2E-20 100.0 7.8 103 2-121 63-182 (239)
189 2avd_A Catechol-O-methyltransf 99.6 2.7E-15 9.3E-20 98.9 7.9 103 2-121 72-180 (229)
190 3b3j_A Histone-arginine methyl 99.6 3.2E-15 1.1E-19 108.5 8.8 100 1-118 160-261 (480)
191 3adn_A Spermidine synthase; am 99.6 5.2E-15 1.8E-19 101.4 9.2 105 2-120 86-198 (294)
192 2b25_A Hypothetical protein; s 99.6 5.8E-15 2E-19 102.7 9.6 103 1-122 107-221 (336)
193 1jg1_A PIMT;, protein-L-isoasp 99.6 7.9E-15 2.7E-19 97.3 9.8 98 2-123 94-192 (235)
194 1zg3_A Isoflavanone 4'-O-methy 99.6 2.7E-15 9.4E-20 105.2 7.7 98 2-125 196-298 (358)
195 4azs_A Methyltransferase WBDD; 99.6 1.9E-15 6.6E-20 111.7 6.5 105 1-123 68-176 (569)
196 2zfu_A Nucleomethylin, cerebra 99.6 4.4E-15 1.5E-19 97.1 7.5 85 2-123 70-154 (215)
197 1nv8_A HEMK protein; class I a 99.6 1.1E-14 3.9E-19 99.3 9.8 105 2-125 126-253 (284)
198 2nxc_A L11 mtase, ribosomal pr 99.6 6.4E-15 2.2E-19 99.0 8.1 99 2-123 123-221 (254)
199 3lec_A NADB-rossmann superfami 99.6 1.9E-14 6.6E-19 95.1 9.6 102 2-120 24-125 (230)
200 2yxl_A PH0851 protein, 450AA l 99.6 5.3E-14 1.8E-18 101.5 12.5 109 1-124 261-393 (450)
201 2bm8_A Cephalosporin hydroxyla 99.6 5.2E-15 1.8E-19 98.5 6.4 99 2-120 84-187 (236)
202 3kr9_A SAM-dependent methyltra 99.6 3.1E-14 1.1E-18 94.0 9.8 101 2-120 18-119 (225)
203 2plw_A Ribosomal RNA methyltra 99.6 2.1E-14 7.3E-19 92.8 8.9 96 2-123 25-157 (201)
204 1uir_A Polyamine aminopropyltr 99.6 1.2E-14 4E-19 100.5 8.0 105 2-120 80-195 (314)
205 3gnl_A Uncharacterized protein 99.6 2.9E-14 9.9E-19 95.0 9.6 102 2-120 24-125 (244)
206 1xj5_A Spermidine synthase 1; 99.6 1.9E-14 6.6E-19 100.1 9.1 104 2-119 123-234 (334)
207 2h00_A Methyltransferase 10 do 99.5 1.2E-14 4.2E-19 97.3 7.3 78 2-94 68-151 (254)
208 2qm3_A Predicted methyltransfe 99.5 8E-14 2.7E-18 98.3 11.8 101 2-120 175-277 (373)
209 2b2c_A Spermidine synthase; be 99.5 1.1E-14 3.7E-19 100.7 7.1 104 2-119 111-221 (314)
210 2o07_A Spermidine synthase; st 99.5 1.6E-14 5.4E-19 99.5 7.5 105 2-120 98-209 (304)
211 2igt_A SAM dependent methyltra 99.5 2E-14 6.8E-19 100.1 8.1 103 2-120 156-272 (332)
212 1inl_A Spermidine synthase; be 99.5 3.5E-14 1.2E-18 97.4 9.1 105 2-120 93-205 (296)
213 2pt6_A Spermidine synthase; tr 99.5 2.2E-14 7.4E-19 99.4 8.1 105 2-120 119-230 (321)
214 1iy9_A Spermidine synthase; ro 99.5 3.4E-14 1.2E-18 96.5 8.8 104 2-119 78-188 (275)
215 3hp7_A Hemolysin, putative; st 99.5 1.8E-14 6.1E-19 98.4 6.1 93 2-119 88-184 (291)
216 2i7c_A Spermidine synthase; tr 99.5 4.9E-14 1.7E-18 96.1 8.1 105 2-120 81-192 (283)
217 2frx_A Hypothetical protein YE 99.5 1.5E-13 5.1E-18 99.7 10.8 107 2-123 120-249 (479)
218 2nyu_A Putative ribosomal RNA 99.5 7E-14 2.4E-18 90.0 7.3 107 1-125 24-150 (196)
219 1mjf_A Spermidine synthase; sp 99.5 6.3E-14 2.2E-18 95.4 7.3 101 2-119 78-192 (281)
220 2as0_A Hypothetical protein PH 99.5 5.7E-14 1.9E-18 99.8 7.2 107 2-124 220-339 (396)
221 3k6r_A Putative transferase PH 99.5 3.1E-13 1.1E-17 91.8 10.3 100 2-122 128-227 (278)
222 2ld4_A Anamorsin; methyltransf 99.5 4E-14 1.4E-18 90.0 5.5 72 40-120 26-101 (176)
223 1wxx_A TT1595, hypothetical pr 99.5 7.4E-14 2.5E-18 98.8 7.4 105 2-124 212-329 (382)
224 3c0k_A UPF0064 protein YCCW; P 99.5 1.7E-13 5.9E-18 97.3 8.8 107 2-124 223-343 (396)
225 2yx1_A Hypothetical protein MJ 99.5 3.7E-13 1.3E-17 93.8 10.2 98 2-124 198-295 (336)
226 3tm4_A TRNA (guanine N2-)-meth 99.5 3.7E-13 1.2E-17 95.0 10.2 103 1-120 219-329 (373)
227 1sqg_A SUN protein, FMU protei 99.5 4.1E-13 1.4E-17 96.3 10.2 107 1-124 248-378 (429)
228 3v97_A Ribosomal RNA large sub 99.5 2.8E-13 9.7E-18 102.2 9.6 106 2-122 542-659 (703)
229 1zq9_A Probable dimethyladenos 99.5 1.7E-13 6E-18 93.5 7.6 97 2-117 31-144 (285)
230 2b78_A Hypothetical protein SM 99.5 1.8E-13 6.2E-18 96.9 7.8 108 2-124 215-335 (385)
231 3m6w_A RRNA methylase; rRNA me 99.4 2.8E-13 9.5E-18 97.8 8.5 107 1-123 103-232 (464)
232 2cmg_A Spermidine synthase; tr 99.4 1.2E-13 4.2E-18 93.2 6.2 94 2-119 75-170 (262)
233 4dmg_A Putative uncharacterize 99.4 5.1E-13 1.8E-17 94.8 9.1 105 2-125 217-331 (393)
234 3m4x_A NOL1/NOP2/SUN family pr 99.4 3.6E-13 1.2E-17 97.1 8.3 108 1-123 107-237 (456)
235 1ne2_A Hypothetical protein TA 99.4 2.2E-12 7.7E-17 83.4 10.6 84 2-110 54-139 (200)
236 2f8l_A Hypothetical protein LM 99.4 1.8E-12 6.3E-17 90.4 10.8 106 2-120 133-256 (344)
237 3dou_A Ribosomal RNA large sub 99.4 8.6E-13 3E-17 85.2 7.7 96 1-125 27-144 (191)
238 3opn_A Putative hemolysin; str 99.4 3.7E-13 1.3E-17 89.4 5.9 97 2-119 40-136 (232)
239 1wy7_A Hypothetical protein PH 99.4 1.4E-11 4.6E-16 80.0 11.9 88 2-110 52-141 (207)
240 2wa2_A Non-structural protein 99.4 1.9E-13 6.6E-18 92.9 2.9 99 2-122 85-195 (276)
241 3lcv_B Sisomicin-gentamicin re 99.4 3.2E-12 1.1E-16 85.6 8.6 100 2-120 135-236 (281)
242 3frh_A 16S rRNA methylase; met 99.3 1.5E-11 5.2E-16 81.6 9.9 98 2-120 108-206 (253)
243 2h1r_A Dimethyladenosine trans 99.3 9.1E-12 3.1E-16 85.5 9.2 75 2-96 45-119 (299)
244 2oxt_A Nucleoside-2'-O-methylt 99.3 4E-13 1.4E-17 90.8 2.2 99 2-122 77-187 (265)
245 3k0b_A Predicted N6-adenine-sp 99.3 4E-11 1.4E-15 85.1 11.4 115 2-121 204-351 (393)
246 2p41_A Type II methyltransfera 99.3 1.5E-12 5.2E-17 89.6 3.6 99 2-123 85-194 (305)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3.5E-11 1.2E-15 86.4 10.8 96 2-119 289-388 (433)
248 3gru_A Dimethyladenosine trans 99.3 1.8E-11 6E-16 83.9 8.1 74 2-95 53-126 (295)
249 2b9e_A NOL1/NOP2/SUN domain fa 99.3 1.6E-10 5.5E-15 79.7 12.9 107 1-123 104-237 (309)
250 2okc_A Type I restriction enzy 99.3 3.2E-11 1.1E-15 86.8 9.3 115 2-120 174-307 (445)
251 3ldg_A Putative uncharacterize 99.2 1.4E-10 4.9E-15 82.0 12.2 115 2-121 197-344 (384)
252 1qam_A ERMC' methyltransferase 99.2 4.2E-11 1.4E-15 80.0 8.9 68 2-90 33-101 (244)
253 2xyq_A Putative 2'-O-methyl tr 99.2 2E-11 6.9E-16 83.4 7.5 92 1-123 65-174 (290)
254 2jjq_A Uncharacterized RNA met 99.2 6.8E-11 2.3E-15 84.7 10.5 94 2-119 293-386 (425)
255 3ldu_A Putative methylase; str 99.2 8E-11 2.7E-15 83.4 10.8 115 2-121 198-345 (385)
256 2qfm_A Spermine synthase; sper 99.2 2.1E-11 7.2E-16 85.3 7.3 108 2-121 191-315 (364)
257 3bt7_A TRNA (uracil-5-)-methyl 99.2 2E-11 6.9E-16 86.0 6.6 99 2-124 216-330 (369)
258 2dul_A N(2),N(2)-dimethylguano 99.2 5E-11 1.7E-15 84.2 8.3 98 2-119 50-163 (378)
259 3axs_A Probable N(2),N(2)-dime 99.2 7.3E-11 2.5E-15 83.6 8.4 101 2-120 55-158 (392)
260 2ih2_A Modification methylase 99.2 5.9E-11 2E-15 84.5 6.9 96 2-122 42-166 (421)
261 1yub_A Ermam, rRNA methyltrans 99.1 2.6E-12 8.8E-17 85.8 -0.7 96 2-118 32-143 (245)
262 3tqs_A Ribosomal RNA small sub 99.1 2E-10 6.8E-15 77.2 8.0 69 2-91 32-104 (255)
263 4gqb_A Protein arginine N-meth 99.1 3.5E-10 1.2E-14 84.3 9.9 103 2-117 360-464 (637)
264 3cvo_A Methyltransferase-like 99.1 1.9E-09 6.4E-14 70.0 12.0 94 2-118 33-152 (202)
265 3b5i_A S-adenosyl-L-methionine 99.1 6.5E-10 2.2E-14 78.3 9.7 125 1-125 54-230 (374)
266 3fut_A Dimethyladenosine trans 99.1 4.2E-10 1.4E-14 76.2 8.0 72 2-94 49-121 (271)
267 2ar0_A M.ecoki, type I restric 99.1 3.6E-10 1.2E-14 83.2 8.3 120 1-120 171-312 (541)
268 3v97_A Ribosomal RNA large sub 99.1 2.3E-09 7.8E-14 81.1 12.2 116 2-121 193-348 (703)
269 3o4f_A Spermidine synthase; am 99.1 1.1E-09 3.9E-14 74.7 9.1 103 2-118 86-196 (294)
270 3ua3_A Protein arginine N-meth 99.0 6E-10 2.1E-14 83.5 7.6 111 2-117 412-531 (745)
271 2efj_A 3,7-dimethylxanthine me 99.0 6.3E-10 2.2E-14 78.5 7.1 122 1-126 54-231 (384)
272 1m6y_A S-adenosyl-methyltransf 99.0 6.1E-10 2.1E-14 76.5 6.2 75 2-93 29-108 (301)
273 1m6e_X S-adenosyl-L-methionnin 99.0 4.4E-10 1.5E-14 78.7 5.5 123 1-126 53-215 (359)
274 3ll7_A Putative methyltransfer 99.0 3.6E-10 1.2E-14 80.4 4.9 71 2-90 96-170 (410)
275 2r6z_A UPF0341 protein in RSP 99.0 2.5E-10 8.6E-15 76.8 2.9 76 2-94 86-172 (258)
276 3lkd_A Type I restriction-modi 98.9 3.7E-08 1.3E-12 72.5 12.7 109 2-121 224-359 (542)
277 3uzu_A Ribosomal RNA small sub 98.9 6.4E-09 2.2E-13 70.7 7.4 60 2-80 45-105 (279)
278 3khk_A Type I restriction-modi 98.9 9E-09 3.1E-13 75.9 8.3 115 2-120 247-395 (544)
279 3ftd_A Dimethyladenosine trans 98.8 2E-08 6.8E-13 67.2 8.5 58 2-80 34-91 (249)
280 1qyr_A KSGA, high level kasuga 98.8 4.7E-09 1.6E-13 70.4 4.8 71 2-92 24-99 (252)
281 2oyr_A UPF0341 protein YHIQ; a 98.7 1.1E-08 3.8E-13 68.8 4.9 77 2-95 91-176 (258)
282 2vz8_A Fatty acid synthase; tr 98.7 4.7E-09 1.6E-13 88.1 3.1 107 1-121 1242-1349(2512)
283 3evf_A RNA-directed RNA polyme 98.7 4.7E-09 1.6E-13 70.6 2.5 103 2-122 77-186 (277)
284 2qy6_A UPF0209 protein YFCK; s 98.7 4.3E-08 1.5E-12 65.9 7.2 114 2-118 63-211 (257)
285 2wk1_A NOVP; transferase, O-me 98.7 6.7E-08 2.3E-12 65.7 7.8 109 2-121 109-245 (282)
286 3s1s_A Restriction endonucleas 98.7 1.8E-07 6.2E-12 71.4 10.6 111 2-121 324-466 (878)
287 3c6k_A Spermine synthase; sper 98.7 4.3E-08 1.5E-12 69.0 6.3 105 2-118 208-329 (381)
288 4fzv_A Putative methyltransfer 98.6 4.4E-07 1.5E-11 63.7 9.0 112 2-124 151-288 (359)
289 3gcz_A Polyprotein; flavivirus 98.4 3.6E-08 1.2E-12 66.5 0.5 103 1-122 92-203 (282)
290 3tka_A Ribosomal RNA small sub 98.4 2E-07 7E-12 64.5 4.1 74 2-94 60-139 (347)
291 4auk_A Ribosomal RNA large sub 98.4 1.7E-06 6E-11 60.7 8.8 91 1-120 213-306 (375)
292 1wg8_A Predicted S-adenosylmet 98.3 1.7E-06 5.9E-11 58.6 7.0 71 2-94 25-100 (285)
293 3eld_A Methyltransferase; flav 98.3 7.5E-07 2.6E-11 60.5 3.9 103 1-122 83-193 (300)
294 3ufb_A Type I restriction-modi 98.2 2.8E-05 9.7E-10 57.2 11.2 114 2-120 220-362 (530)
295 2k4m_A TR8_protein, UPF0146 pr 98.1 3.3E-06 1.1E-10 51.8 4.7 85 2-123 38-124 (153)
296 2px2_A Genome polyprotein [con 97.9 1.5E-05 5.1E-10 53.2 4.3 99 1-122 75-185 (269)
297 1i4w_A Mitochondrial replicati 97.9 3.8E-05 1.3E-09 53.8 6.4 57 2-77 61-117 (353)
298 2zig_A TTHA0409, putative modi 97.9 4.3E-05 1.5E-09 52.2 6.6 43 2-57 238-280 (297)
299 3lkz_A Non-structural protein 97.7 0.00015 5E-09 49.5 7.6 100 2-121 97-205 (321)
300 3p8z_A Mtase, non-structural p 97.7 3.5E-05 1.2E-09 51.0 4.1 99 1-119 80-185 (267)
301 2oo3_A Protein involved in cat 97.6 0.00022 7.6E-09 48.4 7.0 98 2-119 94-197 (283)
302 1g60_A Adenine-specific methyl 97.3 0.00033 1.1E-08 46.9 5.2 43 2-57 215-257 (260)
303 3r24_A NSP16, 2'-O-methyl tran 97.3 0.0012 4.2E-08 45.1 7.3 95 1-125 111-222 (344)
304 3g7u_A Cytosine-specific methy 97.2 0.0052 1.8E-07 43.4 9.8 75 1-97 3-85 (376)
305 3vyw_A MNMC2; tRNA wobble urid 97.1 0.0019 6.5E-08 44.4 7.1 109 2-118 99-224 (308)
306 1rjd_A PPM1P, carboxy methyl t 97.0 0.014 4.7E-07 40.6 10.6 110 2-124 100-236 (334)
307 1g55_A DNA cytosine methyltran 96.7 0.0053 1.8E-07 42.7 6.7 76 1-96 3-81 (343)
308 1zkd_A DUF185; NESG, RPR58, st 96.5 0.0072 2.5E-07 42.8 6.4 51 2-56 83-133 (387)
309 3tos_A CALS11; methyltransfera 96.5 0.027 9.3E-07 37.7 8.6 112 2-122 72-219 (257)
310 3ubt_Y Modification methylase 96.4 0.027 9.3E-07 38.6 8.6 73 1-96 1-74 (331)
311 2py6_A Methyltransferase FKBM; 96.3 0.012 4E-07 42.0 6.7 45 2-56 229-274 (409)
312 2c7p_A Modification methylase 96.3 0.048 1.7E-06 37.7 9.6 72 1-96 12-84 (327)
313 2uyo_A Hypothetical protein ML 95.9 0.18 6.3E-06 34.6 10.6 102 3-120 106-218 (310)
314 1boo_A Protein (N-4 cytosine-s 95.9 0.012 4E-07 40.7 4.6 44 2-58 255-298 (323)
315 1f8f_A Benzyl alcohol dehydrog 95.8 0.047 1.6E-06 38.1 7.6 92 2-120 193-289 (371)
316 2dph_A Formaldehyde dismutase; 95.8 0.036 1.2E-06 39.1 6.9 96 2-120 188-299 (398)
317 4f3n_A Uncharacterized ACR, CO 95.7 0.03 1E-06 40.2 6.2 49 2-56 140-188 (432)
318 4h0n_A DNMT2; SAH binding, tra 95.5 0.072 2.5E-06 37.0 7.5 76 1-96 4-82 (333)
319 3qv2_A 5-cytosine DNA methyltr 95.5 0.049 1.7E-06 37.7 6.6 75 1-96 11-89 (327)
320 2zig_A TTHA0409, putative modi 95.5 0.013 4.6E-07 39.8 3.7 54 66-119 21-96 (297)
321 1eg2_A Modification methylase 95.4 0.02 6.8E-07 39.5 4.5 44 2-58 245-291 (319)
322 3ps9_A TRNA 5-methylaminomethy 95.4 0.087 3E-06 39.8 8.1 115 2-118 69-217 (676)
323 1pqw_A Polyketide synthase; ro 95.2 0.12 4E-06 32.6 7.2 90 2-120 41-137 (198)
324 1kol_A Formaldehyde dehydrogen 95.2 0.099 3.4E-06 36.8 7.5 96 2-120 188-300 (398)
325 3m6i_A L-arabinitol 4-dehydrog 94.8 0.27 9.1E-06 34.1 8.8 94 2-121 182-284 (363)
326 3pvc_A TRNA 5-methylaminomethy 94.7 0.1 3.5E-06 39.5 6.9 115 2-118 61-209 (689)
327 1v3u_A Leukotriene B4 12- hydr 94.5 0.18 6.1E-06 34.6 7.2 90 2-120 148-244 (333)
328 2qrv_A DNA (cytosine-5)-methyl 94.4 0.15 5.2E-06 34.7 6.6 73 1-94 17-94 (295)
329 3fpc_A NADP-dependent alcohol 94.3 0.19 6.7E-06 34.7 7.2 91 2-120 169-266 (352)
330 3fwz_A Inner membrane protein 94.2 0.39 1.3E-05 28.5 7.6 91 3-119 10-104 (140)
331 1boo_A Protein (N-4 cytosine-s 94.2 0.063 2.2E-06 37.0 4.4 54 66-119 14-83 (323)
332 3two_A Mannitol dehydrogenase; 94.0 0.13 4.3E-06 35.6 5.6 87 2-121 179-266 (348)
333 1pl8_A Human sorbitol dehydrog 93.9 0.21 7.2E-06 34.6 6.7 92 2-120 174-273 (356)
334 4ej6_A Putative zinc-binding d 93.9 0.51 1.8E-05 32.9 8.7 94 2-120 185-284 (370)
335 2j3h_A NADP-dependent oxidored 93.8 0.28 9.7E-06 33.7 7.2 91 2-120 158-255 (345)
336 3s2e_A Zinc-containing alcohol 93.8 0.23 7.9E-06 34.1 6.7 91 2-120 169-263 (340)
337 3llv_A Exopolyphosphatase-rela 93.6 0.63 2.1E-05 27.5 7.7 68 2-92 8-79 (141)
338 3l4b_C TRKA K+ channel protien 93.3 0.9 3.1E-05 29.0 8.5 93 1-118 1-97 (218)
339 2d8a_A PH0655, probable L-thre 93.3 0.57 1.9E-05 32.3 8.0 90 2-120 170-267 (348)
340 4b7c_A Probable oxidoreductase 93.3 0.092 3.1E-06 36.0 3.9 91 2-120 152-248 (336)
341 3me5_A Cytosine-specific methy 93.2 0.13 4.6E-06 37.5 4.8 77 1-96 89-182 (482)
342 4dvj_A Putative zinc-dependent 93.2 0.25 8.6E-06 34.4 6.1 90 3-119 175-269 (363)
343 3gms_A Putative NADPH:quinone 93.0 0.38 1.3E-05 33.0 6.8 90 2-120 147-243 (340)
344 3uog_A Alcohol dehydrogenase; 93.0 0.31 1.1E-05 33.9 6.3 90 2-121 192-288 (363)
345 1uuf_A YAHK, zinc-type alcohol 92.8 0.33 1.1E-05 33.9 6.3 90 2-120 197-288 (369)
346 2h6e_A ADH-4, D-arabinose 1-de 92.7 0.11 3.6E-06 35.9 3.6 93 2-120 173-269 (344)
347 3nx4_A Putative oxidoreductase 92.7 0.4 1.4E-05 32.6 6.5 89 3-120 150-241 (324)
348 2dq4_A L-threonine 3-dehydroge 92.7 0.038 1.3E-06 38.1 1.3 91 2-120 167-262 (343)
349 2c0c_A Zinc binding alcohol de 92.6 0.76 2.6E-05 31.9 7.9 89 2-120 166-261 (362)
350 3jv7_A ADH-A; dehydrogenase, n 92.5 0.26 8.9E-06 33.9 5.3 93 2-120 174-270 (345)
351 3ip1_A Alcohol dehydrogenase, 92.4 1.3 4.4E-05 31.2 8.9 92 2-120 216-318 (404)
352 3grk_A Enoyl-(acyl-carrier-pro 92.4 1.6 5.5E-05 29.3 9.1 103 3-121 34-170 (293)
353 1p0f_A NADP-dependent alcohol 92.4 0.87 3E-05 31.7 7.9 92 2-120 194-293 (373)
354 1e3j_A NADP(H)-dependent ketos 92.3 0.53 1.8E-05 32.5 6.8 91 2-120 171-271 (352)
355 3qwb_A Probable quinone oxidor 92.2 0.71 2.4E-05 31.5 7.3 89 2-120 151-247 (334)
356 2fzw_A Alcohol dehydrogenase c 92.2 0.94 3.2E-05 31.5 8.0 92 2-120 193-292 (373)
357 1qor_A Quinone oxidoreductase; 92.0 0.62 2.1E-05 31.7 6.7 90 2-120 143-239 (327)
358 2zb4_A Prostaglandin reductase 91.8 0.2 6.8E-06 34.7 4.1 91 2-120 163-260 (357)
359 1cdo_A Alcohol dehydrogenase; 91.6 0.81 2.8E-05 31.8 7.1 92 2-120 195-294 (374)
360 1eg2_A Modification methylase 91.6 0.18 6E-06 34.8 3.6 54 66-119 38-105 (319)
361 2jhf_A Alcohol dehydrogenase E 91.6 1.1 3.6E-05 31.2 7.6 92 2-120 194-293 (374)
362 3jyn_A Quinone oxidoreductase; 91.5 1.6 5.3E-05 29.7 8.3 91 2-121 143-240 (325)
363 3goh_A Alcohol dehydrogenase, 91.5 0.44 1.5E-05 32.3 5.5 83 2-119 145-228 (315)
364 3uko_A Alcohol dehydrogenase c 91.4 0.98 3.3E-05 31.5 7.3 91 2-120 196-295 (378)
365 4eye_A Probable oxidoreductase 91.4 0.56 1.9E-05 32.3 6.0 88 2-120 162-257 (342)
366 1id1_A Putative potassium chan 91.4 1 3.4E-05 27.0 6.6 94 3-119 6-104 (153)
367 2km1_A Protein DRE2; yeast, an 91.3 0.15 5.3E-06 30.7 2.7 71 43-118 21-96 (136)
368 2hcy_A Alcohol dehydrogenase 1 91.1 0.46 1.6E-05 32.7 5.3 91 2-120 172-269 (347)
369 3l9w_A Glutathione-regulated p 91.0 1.3 4.3E-05 31.7 7.6 93 2-120 6-102 (413)
370 1vj0_A Alcohol dehydrogenase, 90.9 0.68 2.3E-05 32.4 6.1 91 2-120 198-298 (380)
371 2eih_A Alcohol dehydrogenase; 90.9 1.9 6.5E-05 29.5 8.3 90 2-120 169-265 (343)
372 1rjw_A ADH-HT, alcohol dehydro 90.7 0.3 1E-05 33.6 4.1 87 2-120 167-261 (339)
373 1e3i_A Alcohol dehydrogenase, 90.7 1.1 3.7E-05 31.2 7.0 92 2-120 198-297 (376)
374 1yb5_A Quinone oxidoreductase; 90.7 1.2 4E-05 30.8 7.1 89 2-120 173-269 (351)
375 2b5w_A Glucose dehydrogenase; 90.7 0.87 3E-05 31.5 6.5 91 2-120 175-273 (357)
376 1pjc_A Protein (L-alanine dehy 90.6 0.18 6E-06 35.3 2.9 77 34-119 190-266 (361)
377 3k31_A Enoyl-(acyl-carrier-pro 90.5 1.4 4.9E-05 29.6 7.3 103 3-121 33-169 (296)
378 1yqd_A Sinapyl alcohol dehydro 90.5 0.31 1.1E-05 33.9 4.0 92 2-120 190-282 (366)
379 2eez_A Alanine dehydrogenase; 90.4 0.18 6E-06 35.4 2.7 98 2-119 168-265 (369)
380 3o26_A Salutaridine reductase; 90.4 2.8 9.4E-05 27.9 9.1 77 3-94 15-102 (311)
381 4eso_A Putative oxidoreductase 90.1 2.7 9.3E-05 27.5 8.3 99 3-120 11-138 (255)
382 2j8z_A Quinone oxidoreductase; 90.1 1.6 5.4E-05 30.2 7.3 90 2-120 165-261 (354)
383 1wly_A CAAR, 2-haloacrylate re 90.0 1.2 4E-05 30.4 6.6 90 2-120 148-244 (333)
384 1jvb_A NAD(H)-dependent alcoho 90.0 0.9 3.1E-05 31.3 6.0 92 2-120 173-271 (347)
385 4dup_A Quinone oxidoreductase; 89.7 0.21 7.3E-06 34.6 2.7 89 2-120 170-265 (353)
386 4g65_A TRK system potassium up 89.4 0.92 3.1E-05 32.8 5.9 67 1-89 4-74 (461)
387 2cdc_A Glucose dehydrogenase g 89.4 1.8 6.2E-05 30.0 7.2 89 2-120 183-278 (366)
388 2cf5_A Atccad5, CAD, cinnamyl 89.0 0.46 1.6E-05 32.9 4.0 92 2-120 183-275 (357)
389 2vhw_A Alanine dehydrogenase; 88.7 0.25 8.6E-06 34.7 2.5 99 2-120 170-268 (377)
390 1piw_A Hypothetical zinc-type 88.7 0.19 6.6E-06 34.9 1.9 92 2-120 182-276 (360)
391 1wma_A Carbonyl reductase [NAD 88.5 2.1 7.3E-05 27.8 6.9 103 3-120 7-138 (276)
392 1lss_A TRK system potassium up 88.4 2.4 8.2E-05 24.5 9.7 92 1-118 5-100 (140)
393 3ius_A Uncharacterized conserv 88.0 4.1 0.00014 26.7 11.3 70 1-95 6-75 (286)
394 3c85_A Putative glutathione-re 87.7 3.4 0.00012 25.4 7.4 92 2-119 41-138 (183)
395 2gdz_A NAD+-dependent 15-hydro 87.6 4.3 0.00015 26.5 8.3 81 3-97 10-100 (267)
396 3ioy_A Short-chain dehydrogena 87.5 5 0.00017 27.2 9.4 78 3-94 11-98 (319)
397 3ucx_A Short chain dehydrogena 87.5 4.4 0.00015 26.5 8.3 75 3-93 14-98 (264)
398 1ej6_A Lambda2; icosahedral, n 87.4 1.2 4E-05 35.9 5.4 90 2-115 824-919 (1289)
399 4fgs_A Probable dehydrogenase 87.2 3.8 0.00013 27.5 7.5 98 4-120 33-159 (273)
400 1xa0_A Putative NADPH dependen 87.2 1.2 4.2E-05 30.2 5.2 90 2-120 152-246 (328)
401 1g60_A Adenine-specific methyl 87.2 0.6 2E-05 30.9 3.5 52 68-119 6-73 (260)
402 3tjr_A Short chain dehydrogena 86.4 5.7 0.00019 26.7 8.2 76 3-94 34-119 (301)
403 3swr_A DNA (cytosine-5)-methyl 86.3 6.3 0.00022 31.5 9.1 43 1-55 541-584 (1002)
404 1tt7_A YHFP; alcohol dehydroge 86.3 1 3.6E-05 30.6 4.4 90 2-120 153-247 (330)
405 3abi_A Putative uncharacterize 86.0 0.39 1.3E-05 33.5 2.2 66 1-91 17-85 (365)
406 4eez_A Alcohol dehydrogenase 1 85.7 0.87 3E-05 31.2 3.8 94 2-120 166-263 (348)
407 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.3 3 0.0001 27.2 6.2 75 3-93 24-109 (274)
408 4fs3_A Enoyl-[acyl-carrier-pro 85.2 6 0.00021 25.9 8.5 55 34-93 32-96 (256)
409 3iht_A S-adenosyl-L-methionine 84.9 0.97 3.3E-05 28.0 3.2 94 2-118 43-145 (174)
410 3ggo_A Prephenate dehydrogenas 84.8 7.3 0.00025 26.5 9.0 89 2-117 35-125 (314)
411 1iz0_A Quinone oxidoreductase; 84.8 0.86 2.9E-05 30.7 3.4 88 2-119 128-217 (302)
412 4a2c_A Galactitol-1-phosphate 84.7 7.4 0.00025 26.5 8.2 92 2-120 163-260 (346)
413 3iyl_W VP1; non-enveloped viru 84.4 1.4 4.8E-05 35.6 4.7 90 2-115 830-926 (1299)
414 3fbg_A Putative arginate lyase 84.4 1.6 5.5E-05 30.0 4.7 90 3-119 154-247 (346)
415 3o38_A Short chain dehydrogena 84.3 6.6 0.00023 25.6 9.3 56 34-94 47-112 (266)
416 2hwk_A Helicase NSP2; rossman 84.2 5.7 0.00019 27.2 6.9 43 82-124 205-258 (320)
417 3u5t_A 3-oxoacyl-[acyl-carrier 84.1 6.9 0.00024 25.7 7.9 102 3-120 30-161 (267)
418 3guy_A Short-chain dehydrogena 83.7 6.4 0.00022 25.0 9.4 71 6-94 6-83 (230)
419 4e6p_A Probable sorbitol dehyd 83.6 6.4 0.00022 25.6 7.2 72 3-93 11-92 (259)
420 4dcm_A Ribosomal RNA large sub 83.4 9.5 0.00032 26.7 9.2 97 2-121 41-137 (375)
421 3edm_A Short chain dehydrogena 83.3 5.2 0.00018 26.1 6.7 102 3-120 11-143 (259)
422 2ew2_A 2-dehydropantoate 2-red 83.3 7.9 0.00027 25.8 8.8 100 1-119 4-107 (316)
423 3svt_A Short-chain type dehydr 83.1 7.8 0.00027 25.5 7.6 74 8-93 18-101 (281)
424 3oig_A Enoyl-[acyl-carrier-pro 83.0 7.6 0.00026 25.3 8.9 105 3-121 10-148 (266)
425 3h7a_A Short chain dehydrogena 82.9 7.6 0.00026 25.2 8.7 76 3-94 10-94 (252)
426 4ft4_B DNA (cytosine-5)-methyl 82.5 7.8 0.00027 29.8 8.1 49 1-55 213-261 (784)
427 1wg8_A Predicted S-adenosylmet 82.5 0.24 8.4E-06 33.6 -0.1 30 98-127 211-240 (285)
428 3krt_A Crotonyl COA reductase; 82.4 11 0.00039 26.9 8.6 91 2-119 231-343 (456)
429 1xg5_A ARPG836; short chain de 82.3 8.3 0.00029 25.3 9.4 74 7-93 38-121 (279)
430 2pd4_A Enoyl-[acyl-carrier-pro 82.0 7.9 0.00027 25.4 7.2 75 3-94 9-95 (275)
431 3pxx_A Carveol dehydrogenase; 81.7 8.9 0.0003 25.2 9.0 102 3-120 13-153 (287)
432 1bg6_A N-(1-D-carboxylethyl)-L 81.0 10 0.00034 25.9 7.7 101 1-118 5-107 (359)
433 3gt0_A Pyrroline-5-carboxylate 80.8 2.5 8.4E-05 27.6 4.3 46 1-53 3-48 (247)
434 2aef_A Calcium-gated potassium 80.7 6.5 0.00022 25.2 6.3 89 2-118 11-103 (234)
435 3ek2_A Enoyl-(acyl-carrier-pro 80.6 9.4 0.00032 24.8 8.4 103 2-120 16-153 (271)
436 3dmg_A Probable ribosomal RNA 80.6 12 0.00043 26.2 8.1 91 2-120 48-139 (381)
437 4g81_D Putative hexonate dehyd 80.5 10 0.00035 25.1 9.3 71 9-94 17-97 (255)
438 4imr_A 3-oxoacyl-(acyl-carrier 80.5 10 0.00035 25.1 8.0 71 8-93 40-119 (275)
439 3nyw_A Putative oxidoreductase 80.2 5.1 0.00017 26.0 5.7 78 3-93 10-97 (250)
440 3gaz_A Alcohol dehydrogenase s 80.2 7.5 0.00026 26.6 6.8 85 2-119 153-245 (343)
441 1lnq_A MTHK channels, potassiu 79.7 8.3 0.00029 26.2 6.9 85 8-118 121-209 (336)
442 3r3s_A Oxidoreductase; structu 79.5 11 0.00039 25.1 7.8 102 3-120 52-185 (294)
443 3is3_A 17BETA-hydroxysteroid d 79.5 11 0.00036 24.7 9.2 103 3-121 21-153 (270)
444 2g1u_A Hypothetical protein TM 78.8 2.7 9.1E-05 25.2 3.7 93 2-119 21-117 (155)
445 3pi7_A NADH oxidoreductase; gr 78.6 4.6 0.00016 27.7 5.3 81 10-120 177-263 (349)
446 3lyl_A 3-oxoacyl-(acyl-carrier 78.4 11 0.00037 24.2 9.4 76 3-94 8-93 (247)
447 3p2y_A Alanine dehydrogenase/p 78.3 1 3.5E-05 31.9 1.9 37 82-118 264-300 (381)
448 4e21_A 6-phosphogluconate dehy 78.2 6.2 0.00021 27.5 5.9 89 2-117 24-112 (358)
449 3tri_A Pyrroline-5-carboxylate 78.2 13 0.00043 24.8 7.3 91 1-117 4-95 (280)
450 4da9_A Short-chain dehydrogena 78.0 12 0.00042 24.7 8.1 75 3-93 32-117 (280)
451 3trk_A Nonstructural polyprote 77.9 1.9 6.7E-05 29.1 3.0 42 82-123 210-262 (324)
452 1xhl_A Short-chain dehydrogena 77.2 14 0.00047 24.7 8.7 78 3-93 29-116 (297)
453 1spx_A Short-chain reductase f 77.1 6.8 0.00023 25.7 5.7 78 3-93 9-96 (278)
454 3ijr_A Oxidoreductase, short c 77.1 14 0.00046 24.6 8.5 102 3-120 50-182 (291)
455 3tqh_A Quinone oxidoreductase; 76.9 13 0.00045 25.0 7.1 86 3-119 156-244 (321)
456 3k96_A Glycerol-3-phosphate de 76.5 16 0.00056 25.3 8.5 100 1-118 30-131 (356)
457 3ic5_A Putative saccharopine d 76.5 7.6 0.00026 21.4 5.8 68 2-92 7-78 (118)
458 1m6y_A S-adenosyl-methyltransf 76.2 0.32 1.1E-05 33.2 -1.1 29 98-126 223-251 (301)
459 1zem_A Xylitol dehydrogenase; 76.2 13 0.00046 24.1 8.2 76 3-94 10-95 (262)
460 2h7i_A Enoyl-[acyl-carrier-pro 76.0 6.8 0.00023 25.7 5.4 101 3-121 10-149 (269)
461 4dio_A NAD(P) transhydrogenase 75.8 1.2 4.3E-05 31.7 1.8 36 83-118 275-310 (405)
462 3t4x_A Oxidoreductase, short c 75.4 14 0.00049 24.1 9.1 78 3-94 13-96 (267)
463 1zcj_A Peroxisomal bifunctiona 74.9 21 0.00072 25.7 9.3 99 3-118 40-148 (463)
464 2wyu_A Enoyl-[acyl carrier pro 74.5 9.7 0.00033 24.8 5.8 76 3-94 11-97 (261)
465 3nzo_A UDP-N-acetylglucosamine 74.5 11 0.00037 26.5 6.3 76 6-93 40-122 (399)
466 3c24_A Putative oxidoreductase 74.4 16 0.00055 24.2 8.0 86 2-117 13-98 (286)
467 2x9g_A PTR1, pteridine reducta 73.9 16 0.00056 24.1 7.9 75 3-93 26-116 (288)
468 3d1l_A Putative NADP oxidoredu 73.6 16 0.00055 23.8 8.5 89 1-118 11-100 (266)
469 1qsg_A Enoyl-[acyl-carrier-pro 73.4 16 0.00055 23.7 8.7 76 3-94 12-98 (265)
470 1l7d_A Nicotinamide nucleotide 73.4 1.7 6E-05 30.5 2.0 38 83-120 257-294 (384)
471 1zsy_A Mitochondrial 2-enoyl t 73.2 19 0.00067 24.6 8.1 30 83-119 240-269 (357)
472 3i6i_A Putative leucoanthocyan 73.1 15 0.0005 24.9 6.7 88 2-108 12-108 (346)
473 4g65_A TRK system potassium up 73.0 10 0.00035 27.4 6.0 63 8-90 241-307 (461)
474 3dqp_A Oxidoreductase YLBE; al 72.9 15 0.0005 23.0 9.0 70 1-94 1-74 (219)
475 4egf_A L-xylulose reductase; s 72.9 17 0.00057 23.7 8.5 72 9-94 28-109 (266)
476 3ksu_A 3-oxoacyl-acyl carrier 72.6 17 0.00058 23.7 8.3 102 3-120 14-147 (262)
477 2i6t_A Ubiquitin-conjugating e 72.5 20 0.00067 24.3 7.5 73 34-118 39-123 (303)
478 3gvc_A Oxidoreductase, probabl 72.3 18 0.00062 23.9 8.4 73 3-94 32-114 (277)
479 3r6d_A NAD-dependent epimerase 72.1 15 0.00053 22.9 7.3 93 3-120 8-107 (221)
480 3b1f_A Putative prephenate deh 72.0 19 0.00063 23.8 8.4 41 2-51 8-48 (290)
481 3f9i_A 3-oxoacyl-[acyl-carrier 71.9 17 0.00057 23.3 9.1 73 3-94 17-95 (249)
482 4gx0_A TRKA domain protein; me 71.7 8.2 0.00028 28.4 5.4 63 7-89 132-198 (565)
483 2f1k_A Prephenate dehydrogenas 71.6 18 0.00063 23.6 8.9 88 1-117 1-88 (279)
484 4a0s_A Octenoyl-COA reductase/ 71.4 24 0.00084 25.0 8.7 92 2-120 223-336 (447)
485 3g0o_A 3-hydroxyisobutyrate de 70.8 18 0.0006 24.3 6.5 40 2-52 9-48 (303)
486 3v2g_A 3-oxoacyl-[acyl-carrier 70.8 19 0.00067 23.6 9.2 103 3-121 34-166 (271)
487 2vn8_A Reticulon-4-interacting 70.6 4 0.00014 28.3 3.4 90 2-119 186-279 (375)
488 3rku_A Oxidoreductase YMR226C; 70.4 21 0.00071 23.7 10.1 56 35-94 61-126 (287)
489 2p91_A Enoyl-[acyl-carrier-pro 70.4 20 0.00069 23.6 8.0 75 3-94 24-110 (285)
490 3mag_A VP39; methylated adenin 70.0 4.3 0.00015 27.8 3.2 36 2-44 63-98 (307)
491 3tsc_A Putative oxidoreductase 69.6 21 0.00071 23.4 8.3 76 3-94 14-112 (277)
492 3lf2_A Short chain oxidoreduct 69.4 20 0.0007 23.3 9.2 78 3-94 11-98 (265)
493 4gua_A Non-structural polyprot 69.2 5.1 0.00017 30.1 3.7 43 81-123 219-272 (670)
494 3pgx_A Carveol dehydrogenase; 68.5 22 0.00076 23.3 8.5 75 4-94 19-116 (280)
495 1x13_A NAD(P) transhydrogenase 67.2 1.8 6.2E-05 30.7 1.0 18 34-51 195-212 (401)
496 3osu_A 3-oxoacyl-[acyl-carrier 66.6 23 0.00077 22.7 7.6 73 7-94 10-93 (246)
497 3pid_A UDP-glucose 6-dehydroge 65.8 34 0.0012 24.6 8.0 34 9-52 43-76 (432)
498 4a27_A Synaptic vesicle membra 65.7 3.4 0.00012 28.4 2.2 33 81-120 206-238 (349)
499 1gu7_A Enoyl-[acyl-carrier-pro 65.4 25 0.00086 24.0 6.6 32 82-120 244-275 (364)
500 2rir_A Dipicolinate synthase, 65.3 14 0.00049 24.8 5.2 86 2-119 159-245 (300)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=3.7e-22 Score=134.86 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=94.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++.... ++.+++|+|+|+.|++.|++++...+... +++++++|+.++++
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~---------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~----~v~~~~~D~~~~~~- 137 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHH---------DNCKIIAIDNSPAMIERCRRHIDAYKAPT----PVDVIEGDIRDIAI- 137 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCS---------SSCEEEEEESCHHHHHHHHHHHHTSCCSS----CEEEEESCTTTCCC-
T ss_pred CEEEEEeCCCCHHHHHHHHhcCC---------CCCEEEEEECCHHHHHHHHHHHHhhccCc----eEEEeecccccccc-
Confidence 36999999999999999887531 36799999999999999999988776554 89999999988765
Q ss_pred CCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCCCc
Q psy890 81 SDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHVNN 126 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~~~ 126 (131)
++||+|++.+++++++ ++..++.++++.|||||++++.|...+..
T Consensus 138 -~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~ 184 (261)
T 4gek_A 138 -ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFED 184 (261)
T ss_dssp -CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSS
T ss_pred -cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCC
Confidence 4699999999999986 44678999999999999999998776543
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.87 E-value=2.3e-21 Score=130.41 Aligned_cols=107 Identities=22% Similarity=0.337 Sum_probs=94.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+.. ++.++..|+..++++
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPF-------------VKKVVAFDLTEDILKVARAFIEGNGHQ-----QVEYVQGDAEQMPFT 100 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCC-CCCSC
T ss_pred CEEEEEeCCCCHHHHHHHHh-------------CCEEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEecHHhCCCC
Confidence 36999999999999988876 348999999999999999998776543 799999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
+++||+|++..++++++++..++.++.++|+|||++++.+...+.
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPE 145 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCS
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCC
Confidence 889999999999999999999999999999999999998765543
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.85 E-value=1.6e-20 Score=123.23 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=98.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ +..+++++|+|+.+++.++++....+.. ++++...|+...+++.
T Consensus 40 ~vLDiG~G~G~~~~~l~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 40 TVLDVGTGAGFYLPYLSKMVG----------EKGKVYAIDVQEEMVNYAWEKVNKLGLK-----NVEVLKSEENKIPLPD 104 (219)
T ss_dssp EEEESSCTTCTTHHHHHHHHT----------TTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECBTTBCSSCS
T ss_pred EEEEEecCCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEecccccCCCCC
Confidence 699999999999999998863 3579999999999999999998876654 7999999999888888
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++..++++++++..++.++.+.|+|||++++.++....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 89999999999999999999999999999999999998876543
No 4
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.85 E-value=1.8e-20 Score=124.82 Aligned_cols=107 Identities=27% Similarity=0.383 Sum_probs=95.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+.. ++.++..|+..++++
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPY-------------VQECIGVDATKEMVEVASSFAQEKGVE-----NVRFQQGTAESLPFP 84 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHHTCC-----SEEEEECBTTBCCSC
T ss_pred CEEEEEccCcCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEecccccCCCC
Confidence 36999999999999988775 458999999999999999998776543 799999999988888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.++||+|++..++++++++..++.++.++|+|||++++.+...+.
T Consensus 85 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 129 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPE 129 (239)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 889999999999999999999999999999999999998876543
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.85 E-value=1.7e-20 Score=122.70 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=95.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. . ..+++++|+|+.+++.+++++...+..+ +++++..|+.+++++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~-----------~~~v~~~D~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-S-----------DFSIRALDFSKHMNEIALKNIADANLND----RIQIVQGDVHNIPIED 109 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-S-----------EEEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECBTTBCSSCT
T ss_pred EEEEECCCCCHHHHHHHHc-C-----------CCeEEEEECCHHHHHHHHHHHHhccccC----ceEEEEcCHHHCCCCc
Confidence 5899999999999999887 2 5789999999999999999988876654 8999999999988888
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++++..++.++.+.|+|||++++.+..
T Consensus 110 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 89999999999999999999999999999999999987643
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.85 E-value=2.8e-21 Score=130.29 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=86.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. ..+|+++|+|+.|++.+++. +++.++.++++++++++
T Consensus 42 ~vLDvGcGtG~~~~~l~~~-------------~~~v~gvD~s~~ml~~a~~~-----------~~v~~~~~~~e~~~~~~ 97 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLAEF-------------FERVHAVDPGEAQIRQALRH-----------PRVTYAVAPAEDTGLPP 97 (257)
T ss_dssp EEEEESCTTTTTHHHHHTT-------------CSEEEEEESCHHHHHTCCCC-----------TTEEEEECCTTCCCCCS
T ss_pred CEEEEcCCCCHHHHHHHHh-------------CCEEEEEeCcHHhhhhhhhc-----------CCceeehhhhhhhcccC
Confidence 5899999999999988875 56899999999999876431 28999999999999999
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++..++|++ +..+++.++.|+|||||++.+..++.+.
T Consensus 98 ~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp SCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred CcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 999999999999887 5788999999999999999988776543
No 7
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.84 E-value=3.3e-20 Score=126.89 Aligned_cols=108 Identities=17% Similarity=0.039 Sum_probs=96.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+..+ ++.++..|+.+++++
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~ 147 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKF------------GVSIDCLNIAPVQNKRNEEYNNQAGLAD----NITVKYGSFLEIPCE 147 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHHHTCTT----TEEEEECCTTSCSSC
T ss_pred CEEEEeCCCCCHHHHHHHHHh------------CCEEEEEeCCHHHHHHHHHHHHhcCCCc----ceEEEEcCcccCCCC
Confidence 369999999999999998875 3589999999999999999988776654 899999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++..++++++++..++.++.++|||||++++.+....
T Consensus 148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 88999999999999999999999999999999999999876543
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.84 E-value=3.6e-20 Score=125.07 Aligned_cols=105 Identities=20% Similarity=0.171 Sum_probs=95.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. + ..+++++|+|+.+++.++++....++.+ +++++..|+.+++++
T Consensus 48 ~~vLDiGcG~G~~~~~la~~-~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGH-V-----------TGQVTGLDFLSGFIDIFNRNARQSGLQN----RVTGIVGSMDDLPFR 111 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTT-C-----------SSEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECCTTSCCCC
T ss_pred CEEEEeCCCCCHHHHHHHhc-c-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCc----CcEEEEcChhhCCCC
Confidence 36999999999999998887 2 5799999999999999999998877654 799999999998887
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..+++++ ++..++.++.+.|+|||++++.+..
T Consensus 112 ~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp TTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 8899999999999999 8999999999999999999998765
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.84 E-value=2.5e-20 Score=124.89 Aligned_cols=105 Identities=18% Similarity=0.098 Sum_probs=93.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....++.+ +++++..|+.+.++
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDH------------GITGTGIDMSSLFTAQAKRRAEELGVSE----RVHFIHNDAAGYVA- 100 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHT------------CCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEESCCTTCCC-
T ss_pred CEEEEECCCCCHHHHHHHHhc------------CCeEEEEeCCHHHHHHHHHHHHhcCCCc----ceEEEECChHhCCc-
Confidence 369999999999999998874 3589999999999999999988776654 89999999998876
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..++++++++..++.++.++|||||++++.+..
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 788999999999999999999999999999999999997754
No 10
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.84 E-value=4.5e-20 Score=124.74 Aligned_cols=107 Identities=27% Similarity=0.278 Sum_probs=96.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+..+ ++.++..|+.+++++
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATAR------------DVRVTGISISRPQVNQANARATAAGLAN----RVTFSYADAMDLPFE 126 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHHS------------CCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECCTTSCCSC
T ss_pred CEEEEeCCCCCHHHHHHHHhc------------CCEEEEEeCCHHHHHHHHHHHHhcCCCc----ceEEEECccccCCCC
Confidence 369999999999999988863 4689999999999999999988776654 799999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++..+++++++...++.++.+.|+|||++++.++..
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 8899999999999999999999999999999999999987654
No 11
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=2.4e-20 Score=123.59 Aligned_cols=107 Identities=21% Similarity=0.354 Sum_probs=94.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++..... ++.++..|+.+.++.
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~~~ 107 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYP-----------EATFTLVDMSEKMLEIAKNRFRGNL-------KVKYIEADYSKYDFE 107 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCT-----------TCEEEEEESCHHHHHHHHHHTCSCT-------TEEEEESCTTTCCCC
T ss_pred CeEEEecCCCCHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHhhccCC-------CEEEEeCchhccCCC
Confidence 3699999999999999988864 6799999999999999999987654 799999999988766
Q ss_pred CCCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEeccCCCc
Q psy890 81 SDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFSHVNN 126 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~~~~~~ 126 (131)
++||+|++..+++++++.. .++.++.+.|+|||++++.+...+..
T Consensus 108 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 108 -EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGET 154 (234)
T ss_dssp -SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred -CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 8899999999999998665 59999999999999999988765543
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.84 E-value=5.8e-20 Score=123.17 Aligned_cols=104 Identities=18% Similarity=0.208 Sum_probs=94.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ .+++++|+|+.+++.++++....+..+ +++++..|+..++++.
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~------------~~v~~vD~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVK------------GQITGIDLFPDFIEIFNENAVKANCAD----RVKGITGSMDNLPFQN 112 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCC------------SEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECCTTSCSSCT
T ss_pred eEEEeCCCCCHHHHHHHHhCC------------CeEEEEECCHHHHHHHHHHHHHcCCCC----ceEEEECChhhCCCCC
Confidence 699999999999999988743 399999999999999999998877664 6999999999888888
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..+++++ ++..++.++.++|+|||++++.+..
T Consensus 113 ~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 113 EELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp TCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 899999999999998 7899999999999999999998754
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.83 E-value=6.4e-20 Score=124.25 Aligned_cols=106 Identities=23% Similarity=0.280 Sum_probs=96.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++....+.. ++++...|+...+++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNP-----------DAEITSIDISPESLEKARENTEKNGIK-----NVKFLQANIFSLPFE 102 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCT-----------TSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGCCSC
T ss_pred CeEEEecCCCCHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEcccccCCCC
Confidence 3699999999999999988753 679999999999999999998876654 799999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..++++++++..++.++.+.|+|||++++.+..
T Consensus 103 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 889999999999999999999999999999999999998754
No 14
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.5e-20 Score=126.51 Aligned_cols=108 Identities=11% Similarity=0.127 Sum_probs=93.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-cCCCCCCCceeEEecccccCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
.+|||+|||+|..+..+++.+. ...+++++|+|+.+++.++++.... +.. .+++++..|+.++++
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~v~~~~~d~~~~~~ 103 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELK----------PFEQIIGSDLSATMIKTAEVIKEGSPDTY----KNVSFKISSSDDFKF 103 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSS----------CCSEEEEEESCHHHHHHHHHHHHHCC-CC----TTEEEEECCTTCCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCC----------CCCEEEEEeCCHHHHHHHHHHHHhccCCC----CceEEEEcCHHhCCc
Confidence 3699999999999999998652 3689999999999999999998775 222 289999999998876
Q ss_pred CC------CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 ES------DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ~~------~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.. ++||+|++..+++++ ++..++.++.++|+|||++++.+++.
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 66 799999999999999 99999999999999999999865543
No 15
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=1.1e-19 Score=120.02 Aligned_cols=111 Identities=24% Similarity=0.267 Sum_probs=95.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+.......++.+...|+...+++
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASK-------------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH 98 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC
T ss_pred CeEEEECCCCCHHHHHHHhC-------------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC
Confidence 36999999999999988876 46899999999999999999887665332223689999999988888
Q ss_pred CCCeeEEEEccccccccCHH---HHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRID---KALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~---~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++..+++++++.. .++.++.++|+|||++++.++...
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 88999999999999998877 899999999999999999887553
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.83 E-value=4.8e-20 Score=125.50 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=93.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-IE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 80 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+..+ +++++..|+.+.+ +.
T Consensus 71 ~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAER-------------GHQVILCDLSAQMIDRAKQAAEAKGVSD----NMQFIHCAAQDVASHL 133 (285)
T ss_dssp EEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHC-CCGG----GEEEEESCGGGTGGGC
T ss_pred EEEEeCCcchHHHHHHHHC-------------CCEEEEEECCHHHHHHHHHHHHhcCCCc----ceEEEEcCHHHhhhhc
Confidence 6999999999999988876 4689999999999999999988776543 8999999998886 67
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..++++++++..++.++.++|+|||++++....
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 789999999999999999999999999999999999987754
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.83 E-value=6.8e-20 Score=123.16 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=94.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++..... +++++..|+.+.+++
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY------------GAHTHGIDICSNIVNMANERVSGNN-------KIIFEANDILTKEFP 117 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHTCCSCT-------TEEEEECCTTTCCCC
T ss_pred CEEEEECCCCCHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHHhhcCC-------CeEEEECccccCCCC
Confidence 369999999999999998874 3689999999999999998876542 899999999998888
Q ss_pred CCCeeEEEEccccccc--cCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.++||+|++..+++++ +++..++.++.++|+|||++++.+...+.
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 8899999999999999 78999999999999999999998876544
No 18
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.83 E-value=3.5e-20 Score=120.88 Aligned_cols=102 Identities=10% Similarity=0.016 Sum_probs=83.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc-----------CCCCCCCceeE
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF-----------KVPVPNPRLRF 69 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 69 (131)
.+|||+|||+|..+..+++. +.+|+++|+|+.|++.++++..... .. .++++
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-------------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~----~~v~~ 86 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-------------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAA----PGIEI 86 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-------------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEEC----SSSEE
T ss_pred CEEEEeCCCCcHhHHHHHHC-------------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccC----CccEE
Confidence 36999999999999998886 4689999999999999998764310 01 27999
Q ss_pred EecccccCCCCC-CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEE
Q psy890 70 LEANAEELPIES-DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 70 ~~~d~~~~~~~~-~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
+.+|+.++++.. ++||+|++..++++++ +...++.+++++|||||+++++
T Consensus 87 ~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 87 WCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp EEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred EECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999999887654 7899999998898886 4567899999999999984444
No 19
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.82 E-value=1.2e-19 Score=123.67 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=93.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ ...+++++|+|+.++..++++....+ .+++++..|+.+++++
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLP----------EGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGDATEIELN 87 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSC----------TTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESCTTTCCCS
T ss_pred CeEEEecCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcchhhcCcC
Confidence 3699999999999999988764 24799999999999999999987644 2799999999988764
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++++..++.++++.|+|||++++.+..
T Consensus 88 -~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 -DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 68999999999999999999999999999999999998765
No 20
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.82 E-value=1.2e-19 Score=128.35 Aligned_cols=109 Identities=18% Similarity=0.100 Sum_probs=94.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-----c-CCCCCCCceeEEecccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-----F-KVPVPNPRLRFLEANAE 75 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~d~~ 75 (131)
+|||+|||+|.++..+++... +..+++++|+|+.+++.++++.... + ... ++++++..|+.
T Consensus 86 ~VLDlGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~---~~v~~~~~d~~ 152 (383)
T 4fsd_A 86 TVLDLGCGTGRDVYLASKLVG----------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSR---SNVRFLKGFIE 152 (383)
T ss_dssp EEEEESCTTSHHHHHHHHHHT----------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTC---CCEEEEESCTT
T ss_pred EEEEecCccCHHHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCC---CceEEEEccHH
Confidence 699999999999999998864 3679999999999999999987643 1 111 28999999998
Q ss_pred cC------CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 76 EL------PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 76 ~~------~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++ +++.++||+|+++.++++++++..++.++.++|||||++++.+...
T Consensus 153 ~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 153 NLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 86 7778899999999999999999999999999999999999987654
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=9.4e-20 Score=118.35 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=90.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. ++.++..|+.+++++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~~ 99 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL-------------GHQIEGLEPATRLVELARQTHP----------SVTFHHGTITDLSDS 99 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT-------------TCCEEEECCCHHHHHHHHHHCT----------TSEEECCCGGGGGGS
T ss_pred CeEEEecCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHHhCC----------CCeEEeCcccccccC
Confidence 36999999999999988876 4589999999999999988731 789999999988887
Q ss_pred CCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.++||+|++..++++++ ++..++.++.+.|+|||++++..+....
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp CCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred CCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 88999999999999997 8899999999999999999998766544
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.82 E-value=2.3e-19 Score=123.75 Aligned_cols=106 Identities=21% Similarity=0.168 Sum_probs=95.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++.. +.+++++|+++.+++.++++....++.+ +++++..|+.+++++.
T Consensus 120 ~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 120 TLVDAGCGRGGSMVMAHRRF------------GSRVEGVTLSAAQADFGNRRARELRIDD----HVRSRVCNMLDTPFDK 183 (312)
T ss_dssp EEEEESCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECCTTSCCCCT
T ss_pred EEEEecCCCCHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----ceEEEECChhcCCCCC
Confidence 69999999999999998874 4689999999999999999998877664 8999999999988888
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++..+++++ ++..++.++.++|||||++++.+....
T Consensus 184 ~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 184 GAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp TCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 899999999999999 599999999999999999998875443
No 23
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.82 E-value=2.2e-19 Score=116.98 Aligned_cols=106 Identities=19% Similarity=0.117 Sum_probs=90.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..++.. .+.+++++|+|+.+++.++++....+ .++.++..|+.+.+++.
T Consensus 26 ~vLDiGcG~G~~~~~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~ 87 (209)
T 2p8j_A 26 TVLDCGAGGDLPPLSIFVE------------DGYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIRKLPFKD 87 (209)
T ss_dssp EEEEESCCSSSCTHHHHHH------------TTCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTTSCCSCT
T ss_pred EEEEECCCCCHHHHHHHHh------------CCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchhhCCCCC
Confidence 6999999999986655544 25689999999999999999887654 17889999999888878
Q ss_pred CCeeEEEEccccccc--cCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++..+++++ .+...++.++.+.|+|||++++.+++.+.
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 899999999999988 67889999999999999999998877544
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.82 E-value=2.1e-19 Score=117.93 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=89.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. . ++.++..|+.+.+++
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~--~-------~~~~~~~d~~~~~~~ 104 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLA-------------GRTVYGIEPSREMRMIAKEKLP--K-------EFSITEGDFLSFEVP 104 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHT-------------TCEEEEECSCHHHHHHHHHHSC--T-------TCCEESCCSSSCCCC
T ss_pred CeEEEeCCCCCHHHHHHHhC-------------CCeEEEEeCCHHHHHHHHHhCC--C-------ceEEEeCChhhcCCC
Confidence 36999999999999988875 4689999999999999998876 2 789999999998877
Q ss_pred CCCeeEEEEccccccccCHHH--HHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDK--ALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~--~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..+++++++... ++.++.+.|+|||++++.+...
T Consensus 105 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 105 -TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp -SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred -CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 89999999999999998876 9999999999999999987544
No 25
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=2e-19 Score=120.48 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=89.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++.. . .++.++..|+..++++
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~-~-------~~~~~~~~d~~~~~~~ 105 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHG------------AKKVLGIDLSERMLTEAKRKTT-S-------PVVCYEQKAIEDIAIE 105 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHCC-C-------TTEEEEECCGGGCCCC
T ss_pred CEEEEECCCCCHHHHHHHHcC------------CCEEEEEECCHHHHHHHHHhhc-c-------CCeEEEEcchhhCCCC
Confidence 369999999999999888762 2389999999999999998876 1 2899999999988887
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++..++++++++..++.++.++|+|||++++...
T Consensus 106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 88999999999999999999999999999999999998643
No 26
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.82 E-value=2e-19 Score=117.81 Aligned_cols=100 Identities=13% Similarity=0.181 Sum_probs=88.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+|+.+++.++++..... +++++..|+.+.+ +.
T Consensus 54 ~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 54 NGLEIGCAAGAFTEKLAPH-------------CKRLTVIDVMPRAIGRACQRTKRWS-------HISWAATDILQFS-TA 112 (216)
T ss_dssp EEEEECCTTSHHHHHHGGG-------------EEEEEEEESCHHHHHHHHHHTTTCS-------SEEEEECCTTTCC-CS
T ss_pred cEEEEcCCCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhcccCC-------CeEEEEcchhhCC-CC
Confidence 6899999999999988876 4589999999999999999887644 8999999998877 56
Q ss_pred CCeeEEEEccccccccCH---HHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRI---DKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++++ ..++.++.++|+|||++++....
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 889999999999999876 57799999999999999986543
No 27
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.82 E-value=3.8e-19 Score=114.86 Aligned_cols=103 Identities=16% Similarity=0.033 Sum_probs=90.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+.. ++.+...|+.+.++ .
T Consensus 35 ~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~~~-~ 95 (199)
T 2xvm_A 35 KTLDLGCGNGRNSLYLAAN-------------GYDVDAWDKNAMSIANVERIKSIENLD-----NLHTRVVDLNNLTF-D 95 (199)
T ss_dssp EEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECCGGGCCC-C
T ss_pred eEEEEcCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHhCCCC-----CcEEEEcchhhCCC-C
Confidence 6999999999999988875 458999999999999999998776643 79999999988877 7
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..++++++ +....+.++.+.|+|||++++++...
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 8899999999999987 78999999999999999988876543
No 28
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.81 E-value=1.8e-19 Score=119.87 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=87.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+|+.+++.++++... ++.++..|+.+. .++
T Consensus 45 ~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~~~-~~~ 101 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEH-------------FNDITCVEASEEAISHAQGRLKD---------GITYIHSRFEDA-QLP 101 (250)
T ss_dssp CEEEESCTTSHHHHHHTTT-------------CSCEEEEESCHHHHHHHHHHSCS---------CEEEEESCGGGC-CCS
T ss_pred cEEEECCCCCHHHHHHHHh-------------CCcEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHHHc-CcC
Confidence 6999999999999988775 35799999999999999988643 588999998877 456
Q ss_pred CCeeEEEEccccccccCHHHHHHHHH-HhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAY-RVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~-~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..++++++++..++.++. ++|||||++++.+...
T Consensus 102 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 78999999999999999999999999 9999999999987554
No 29
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=2.5e-19 Score=119.06 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=91.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++... .++.++..|+.+.+++
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRT-------------GYKAVGVDISEVMIQKGKERGEG--------PDLSFIKGDLSSLPFE 113 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHTTTCB--------TTEEEEECBTTBCSSC
T ss_pred CeEEEEcCCCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHhhccc--------CCceEEEcchhcCCCC
Confidence 36999999999999988886 46899999999999999887521 2799999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++..++++++++..++.++.+.|+|||++++......
T Consensus 114 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 88999999999999999999999999999999999999875543
No 30
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.81 E-value=3e-19 Score=119.88 Aligned_cols=99 Identities=28% Similarity=0.320 Sum_probs=88.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. .. . .++.++..|+.+++++.
T Consensus 42 ~vLDiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~-~~-~----~~~~~~~~d~~~~~~~~ 102 (263)
T 2yqz_A 42 VFLELGVGTGRIALPLIAR-------------GYRYIALDADAAMLEVFRQKIA-GV-D----RKVQVVQADARAIPLPD 102 (263)
T ss_dssp EEEEETCTTSTTHHHHHTT-------------TCEEEEEESCHHHHHHHHHHTT-TS-C----TTEEEEESCTTSCCSCT
T ss_pred EEEEeCCcCCHHHHHHHHC-------------CCEEEEEECCHHHHHHHHHHhh-cc-C----CceEEEEcccccCCCCC
Confidence 6999999999999988775 4689999999999999998872 22 1 28999999998888878
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++||+|++..+++++++....+.++.++|+|||++++.
T Consensus 103 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 103 ESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 89999999999999999999999999999999999886
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=1.5e-19 Score=118.66 Aligned_cols=110 Identities=13% Similarity=0.045 Sum_probs=90.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ ..+++++|+|+.+++.+++++...++.+....+++++..|+...+..
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSF-----------FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR 99 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTT-----------CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG
T ss_pred CEEEEeCCCCCHHHHHHHhhCC-----------CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc
Confidence 3699999999999999888643 47999999999999999999875543210001689999998776666
Q ss_pred CCCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++..+++++++. ..++.++.+.|+|||+++++..
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 100 FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 6789999999999999855 8999999999999998877654
No 32
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.81 E-value=2e-19 Score=119.35 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=90.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+... +++++..|+.+.+ +.
T Consensus 69 ~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~-~~ 130 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMASP-------------ERFVVGLDISESALAKANETYGSSPKAE----YFSFVKEDVFTWR-PT 130 (235)
T ss_dssp EEEEETCTTCHHHHHHCBT-------------TEEEEEECSCHHHHHHHHHHHTTSGGGG----GEEEECCCTTTCC-CS
T ss_pred CEEEeCCCCCHHHHHHHhC-------------CCeEEEEECCHHHHHHHHHHhhccCCCc----ceEEEECchhcCC-CC
Confidence 6899999999999888653 5789999999999999999987643332 7999999998876 44
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.+||+|++..++++++ +...++.++.+.|+|||++++.++...
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 5899999999999998 889999999999999999999876543
No 33
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.81 E-value=2e-19 Score=123.67 Aligned_cols=108 Identities=12% Similarity=-0.009 Sum_probs=93.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..++.... +..+++++|+|+.+++.++++....+..+ +++++..|+.+.+++
T Consensus 121 ~vLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~- 185 (305)
T 3ocj_A 121 VVASVPCGWMSELLALDYSAC----------PGVQLVGIDYDPEALDGATRLAAGHALAG----QITLHRQDAWKLDTR- 185 (305)
T ss_dssp EEEETTCTTCHHHHTSCCTTC----------TTCEEEEEESCHHHHHHHHHHHTTSTTGG----GEEEEECCGGGCCCC-
T ss_pred EEEEecCCCCHHHHHHHHhcC----------CCCeEEEEECCHHHHHHHHHHHHhcCCCC----ceEEEECchhcCCcc-
Confidence 699999999999988853321 36799999999999999999998776553 699999999998877
Q ss_pred CCeeEEEEccccccccCHHH---HHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDK---ALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~---~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++..+++++++... ++.++.+.|+|||++++.++..+
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 89999999999999987765 79999999999999999886654
No 34
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.81 E-value=6.5e-19 Score=120.88 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=93.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++.. +.+++++|+|+.+++.++++....++.+ ++.+...|+.++
T Consensus 74 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~--- 134 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAEY------------DVNVIGLTLSENQYAHDKAMFDEVDSPR----RKEVRIQGWEEF--- 134 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHHH------------CCEEEEEECCHHHHHHHHHHHHHSCCSS----CEEEEECCGGGC---
T ss_pred CEEEEeeccCcHHHHHHHHhC------------CCEEEEEECCHHHHHHHHHHHHhcCCCC----ceEEEECCHHHc---
Confidence 369999999999999998875 3689999999999999999998877664 799999999876
Q ss_pred CCCeeEEEEccccccccCH---------HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNVTRI---------DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~---------~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.++||+|++..++++++++ ..++.++.++|||||++++.+...+.
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 6789999999999999554 79999999999999999998876543
No 35
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=2e-19 Score=118.15 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=90.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ ..+++++|+|+.+++.+++++...++.+....+++++..|+...+..
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKS-----------FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR 99 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTT-----------CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG
T ss_pred CEEEEecCCCCHHHHHHHhcCC-----------CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc
Confidence 3699999999999998887642 47999999999999999999876543310001689999998777666
Q ss_pred CCCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..+++++++. ..++.++.+.|+|||+++.+...
T Consensus 100 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 100 FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 7899999999999999855 79999999999999977766543
No 36
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.80 E-value=3.7e-19 Score=118.48 Aligned_cols=106 Identities=20% Similarity=0.174 Sum_probs=90.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++....+. .++.++..|+...++..
T Consensus 82 ~vLDiGcG~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~~~~ 144 (241)
T 2ex4_A 82 CALDCGAGIGRITKRLLLPL------------FREVDMVDITEDFLVQAKTYLGEEGK-----RVRNYFCCGLQDFTPEP 144 (241)
T ss_dssp EEEEETCTTTHHHHHTTTTT------------CSEEEEEESCHHHHHHHHHHTGGGGG-----GEEEEEECCGGGCCCCS
T ss_pred EEEEECCCCCHHHHHHHHhc------------CCEEEEEeCCHHHHHHHHHHhhhcCC-----ceEEEEEcChhhcCCCC
Confidence 69999999999999887752 35899999999999999999876531 16899999998887777
Q ss_pred CCeeEEEEccccccccC--HHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++..+++++++ ...++.++.++|+|||++++.+....
T Consensus 145 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 189 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQ 189 (241)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBS
T ss_pred CCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCC
Confidence 78999999999999987 45899999999999999999876443
No 37
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=5e-19 Score=118.64 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=89.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++. +++.++..|+.+.+ +.
T Consensus 36 ~vLdiG~G~G~~~~~l~~~~~-----------~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 36 NGYDLGCGPGNSTELLTDRYG-----------VNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWK-PA 93 (259)
T ss_dssp SEEEETCTTTHHHHHHHHHHC-----------TTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCC-CS
T ss_pred EEEEecCcCCHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcC-cc
Confidence 699999999999999988864 578999999999999998872 17899999998877 67
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++++..++.++.+.|+|||++++....
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 78999999999999999999999999999999999987654
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.80 E-value=3.4e-19 Score=119.18 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=90.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++..... ++.++..|+...+++.
T Consensus 96 ~vLDiG~G~G~~~~~l~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 96 RALDCGAGIGRITKNLLTKL------------YATTDLLEPVKHMLEEAKRELAGMP-------VGKFILASMETATLPP 156 (254)
T ss_dssp EEEEETCTTTHHHHHTHHHH------------CSEEEEEESCHHHHHHHHHHTTTSS-------EEEEEESCGGGCCCCS
T ss_pred EEEEECCCcCHHHHHHHHhh------------cCEEEEEeCCHHHHHHHHHHhccCC-------ceEEEEccHHHCCCCC
Confidence 69999999999999888763 3579999999999999999886542 8999999999888777
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++ ++..++.++.+.|+|||++++.+..
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 8999999999999994 5889999999999999999998753
No 39
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.80 E-value=1.2e-18 Score=118.59 Aligned_cols=105 Identities=18% Similarity=0.111 Sum_probs=91.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++..+ .+++++|+|+.+++.++++....+..+ ++.+...|+.+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~------------~~v~gvd~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYD------------VNVVGLTLSKNQANHVQQLVANSENLR----SKRVLLAGWEQFD-- 127 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC------------CEEEEEESCHHHHHHHHHHHHTCCCCS----CEEEEESCGGGCC--
T ss_pred CEEEEECCcccHHHHHHHHHcC------------CEEEEEECCHHHHHHHHHHHHhcCCCC----CeEEEECChhhCC--
Confidence 3699999999999999987653 489999999999999999988766554 8999999998765
Q ss_pred CCCeeEEEEccccccc--cCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++..+++++ +++..++.++.++|||||++++.+....
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 789999999999999 6789999999999999999999876643
No 40
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.80 E-value=4.3e-19 Score=119.30 Aligned_cols=102 Identities=10% Similarity=-0.004 Sum_probs=84.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc----------------cCCCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL----------------FKVPVPNP 65 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~----------------~~~~~~~~ 65 (131)
+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++.... ... .
T Consensus 71 ~vLD~GCG~G~~~~~La~~-------------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 133 (252)
T 2gb4_A 71 RVFFPLCGKAIEMKWFADR-------------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS----G 133 (252)
T ss_dssp EEEETTCTTCTHHHHHHHT-------------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT----S
T ss_pred eEEEeCCCCcHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC----C
Confidence 6999999999999988875 568999999999999998765310 001 2
Q ss_pred ceeEEecccccCCCCC-CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEe
Q psy890 66 RLRFLEANAEELPIES-DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 66 ~~~~~~~d~~~~~~~~-~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+++++++|+.+++... ++||+|++..++++++ +...++.++.++|||||+++++.
T Consensus 134 ~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 134 SISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp SEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 7999999999887653 7899999998888876 46789999999999999997543
No 41
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=8.4e-19 Score=114.68 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=88.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.+++ .+.. ++.++..|+.+. ++.
T Consensus 49 ~vLdiG~G~G~~~~~l~~~-------------~~~v~~~D~s~~~~~~a~~----~~~~-----~~~~~~~d~~~~-~~~ 105 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGL-------------ADRVTALDGSAEMIAEAGR----HGLD-----NVEFRQQDLFDW-TPD 105 (218)
T ss_dssp EEEEESCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHGG----GCCT-----TEEEEECCTTSC-CCS
T ss_pred eEEEECCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHh----cCCC-----CeEEEecccccC-CCC
Confidence 6999999999999998886 4689999999999999987 2222 799999999887 677
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++..+++++++. ..++.++.+.|+|||++++.++..+
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 899999999999999874 8999999999999999999987764
No 42
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.79 E-value=3.2e-19 Score=122.00 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=83.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCe--EEEEeCCHHHHHHHHHHhhhc-cCCCCCCCce--eEEeccccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH--VTVADINRAMLDVGEQRARDL-FKVPVPNPRL--RFLEANAEE 76 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~D~s~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~d~~~ 76 (131)
+|||||||+|..+..++..+.... +..+ ++++|+|++|++.++++.... +.. ++ .+...+..+
T Consensus 55 ~VLDiG~GtG~~~~~~l~~l~~~~-------~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-----~v~~~~~~~~~~~ 122 (292)
T 2aot_A 55 KILSIGGGAGEIDLQILSKVQAQY-------PGVCINNEVVEPSAEQIAKYKELVAKTSNLE-----NVKFAWHKETSSE 122 (292)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHS-------TTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-----TEEEEEECSCHHH
T ss_pred eEEEEcCCCCHHHHHHHHHHHhhC-------CCceeeEEEEeCCHHHHHHHHHHHHhccCCC-----cceEEEEecchhh
Confidence 699999999988776655432100 1343 499999999999999987643 222 44 445666554
Q ss_pred CC------CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 77 LP------IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 77 ~~------~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.+ +++++||+|++.+++|+++++..++.+++++|||||++++.....
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 32 456889999999999999999999999999999999999876543
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.79 E-value=8.9e-19 Score=110.84 Aligned_cols=98 Identities=21% Similarity=0.258 Sum_probs=86.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.+++.++++ . +++++...| .+++.
T Consensus 20 ~vLDiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~---~-------~~v~~~~~d---~~~~~ 73 (170)
T 3i9f_A 20 VIVDYGCGNGFYCKYLLEF-------------ATKLYCIDINVIALKEVKEK---F-------DSVITLSDP---KEIPD 73 (170)
T ss_dssp EEEEETCTTCTTHHHHHTT-------------EEEEEEECSCHHHHHHHHHH---C-------TTSEEESSG---GGSCT
T ss_pred eEEEECCCCCHHHHHHHhh-------------cCeEEEEeCCHHHHHHHHHh---C-------CCcEEEeCC---CCCCC
Confidence 6999999999999988876 23899999999999999888 1 278999888 55667
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++..++++++++..++.++.+.|+|||++++.++....
T Consensus 74 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 74 NSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp TCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred CceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 89999999999999999999999999999999999999876553
No 44
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.79 E-value=1.1e-18 Score=111.94 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=83.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
.+|||+|||+|..+..+++. ..+++++|+|+.+++.++++....+.. +++++..+...++ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-------------~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~~~~~l~~~ 85 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-------------SKKVYAFDVQEQALGKTSQRLSDLGIE-----NTELILDGHENLDHY 85 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHHTCC-----CEEEEESCGGGGGGT
T ss_pred CEEEEEcCCCCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCcHHHHHhh
Confidence 36999999999999998876 468999999999999999999877653 8999987777653 4
Q ss_pred CCCCeeEEEEcccc-cc--------ccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 ESDSYSAYTIAFGI-RN--------VTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 ~~~~~D~i~~~~~l-~~--------~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
..++||+|+++... +. ..+....+.++.+.|||||+++++.+..+
T Consensus 86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 46789999887432 21 13456788999999999999999877644
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=1.4e-18 Score=118.00 Aligned_cols=99 Identities=20% Similarity=0.197 Sum_probs=87.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++. . ++.+...|+..+++
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~---~-------~~~~~~~d~~~~~~- 114 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQS-------------GAEVLGTDNAATMIEKARQNY---P-------HLHFDVADARNFRV- 114 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHC---T-------TSCEEECCTTTCCC-
T ss_pred CEEEEecCCCCHHHHHHHhC-------------CCeEEEEECCHHHHHHHHhhC---C-------CCEEEECChhhCCc-
Confidence 36999999999999988872 579999999999999998775 1 78899999988876
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++..++++++++..++.++.+.|+|||++++.....
T Consensus 115 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 4789999999999999999999999999999999999876543
No 46
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.79 E-value=6.3e-19 Score=120.66 Aligned_cols=107 Identities=16% Similarity=0.181 Sum_probs=85.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCC--------------------
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVP-------------------- 61 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~-------------------- 61 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.|++++.......
T Consensus 49 ~VLDiGCG~G~~~~~la~~~~-----------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (292)
T 3g07_A 49 DVLDLGCNVGHLTLSIACKWG-----------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGT 117 (292)
T ss_dssp EEEEESCTTCHHHHHHHHHTC-----------CSEEEEEESCHHHHHHHHHTC---------------------------
T ss_pred cEEEeCCCCCHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccc
Confidence 699999999999999999865 5799999999999999998866432110
Q ss_pred ---------------------------------CCCCceeEEecccccCC-----CCCCCeeEEEEcccccccc------
Q psy890 62 ---------------------------------VPNPRLRFLEANAEELP-----IESDSYSAYTIAFGIRNVT------ 97 (131)
Q Consensus 62 ---------------------------------~~~~~~~~~~~d~~~~~-----~~~~~~D~i~~~~~l~~~~------ 97 (131)
....+++++..|+.... +..++||+|++..+++|+.
T Consensus 118 ~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 118 TTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 00027999999987543 4568899999999987764
Q ss_pred CHHHHHHHHHHhccCCcEEEEE
Q psy890 98 RIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 98 ~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++.+++.+++++|+|||++++.
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEe
Confidence 7789999999999999999874
No 47
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.79 E-value=1.5e-18 Score=115.33 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=88.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++. + ..+++++|+|+.+++.++++... .++.++..|+...+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~-----------~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~ 104 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEH-G-----------ASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHLP 104 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHT-T-----------CSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCCC
T ss_pred CEEEEEcCcCCHHHHHHHHC-C-----------CCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccCC
Confidence 36999999999999888775 1 23899999999999999887643 1689999999888777
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++..++++++++...+.++.+.|+|||++++...
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 78999999999999999999999999999999999998764
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=1.6e-18 Score=114.08 Aligned_cols=102 Identities=21% Similarity=0.307 Sum_probs=88.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+ .+++++..|+.+.+++.
T Consensus 41 ~vLDlG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 41 KVLDLACGVGGFSFLLEDY-------------GFEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKLSFED 101 (227)
T ss_dssp EEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSCCSCT
T ss_pred eEEEEeccCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHhcC------CCceEEECchhcCCCCC
Confidence 6999999999999888775 3489999999999999999887654 17999999998877777
Q ss_pred CCeeEEEEccc--cccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFG--IRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~--l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..+ +++.++...++.++.+.|+|||++++.+..
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 89999999988 555667889999999999999999987664
No 49
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=4.6e-19 Score=119.44 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=87.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++. +++++..|+.+++++
T Consensus 36 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~~~ 91 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALANQ-------------GLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYAENLALP 91 (261)
T ss_dssp CEEEEETCTTSHHHHHHHTT-------------TCEEEEECSCHHHHHSSCCCT-----------TEEEECCCTTSCCSC
T ss_pred CEEEEEcCcccHHHHHHHhC-------------CCEEEEEeCCHHHHHHHHhcc-----------CCEEEECchhhCCCC
Confidence 36999999999999988862 579999999998888765433 689999999998888
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++..++++++++..++.++.+.|| ||++++.++...
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 8899999999999999999999999999999 999888887653
No 50
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.78 E-value=1.6e-18 Score=113.08 Aligned_cols=98 Identities=27% Similarity=0.335 Sum_probs=86.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+ + ..+++++|+|+.+++.++++. . ++.++..|+.+++++
T Consensus 38 ~~vLdiG~G~G~~~~~l----~-----------~~~v~~vD~s~~~~~~a~~~~---~-------~~~~~~~d~~~~~~~ 92 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL----P-----------YPQKVGVEPSEAMLAVGRRRA---P-------EATWVRAWGEALPFP 92 (211)
T ss_dssp SEEEEETCTTCHHHHHC----C-----------CSEEEEECCCHHHHHHHHHHC---T-------TSEEECCCTTSCCSC
T ss_pred CeEEEECCCCCHhHHhC----C-----------CCeEEEEeCCHHHHHHHHHhC---C-------CcEEEEcccccCCCC
Confidence 36999999999987766 2 348999999999999998886 1 788999999888887
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++..++++++++...+.++.++|+|||++++.....
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 8899999999999999999999999999999999999987654
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.78 E-value=4.4e-18 Score=117.47 Aligned_cols=106 Identities=11% Similarity=0.052 Sum_probs=92.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++.. +.+++++|+|+.+++.++++....+..+ ++.+...|+.+++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERF------------DVNVIGLTLSKNQHARCEQVLASIDTNR----SRQVLLQGWEDFA-- 153 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHH------------CCEEEEEESCHHHHHHHHHHHHTSCCSS----CEEEEESCGGGCC--
T ss_pred CEEEEEcccchHHHHHHHHHC------------CCEEEEEECCHHHHHHHHHHHHhcCCCC----ceEEEECChHHCC--
Confidence 369999999999999998875 3589999999999999999988766553 7999999988764
Q ss_pred CCCeeEEEEccccccc--cCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++..+++++ +++..++.++.++|+|||++++.+.....
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 689999999999999 68899999999999999999998776543
No 52
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.78 E-value=3.7e-18 Score=120.06 Aligned_cols=107 Identities=15% Similarity=0.115 Sum_probs=92.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--PI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~ 79 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...+..+ +++++..|+.+. ++
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 245 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQYNK-----------EVEVTIVDL-PQQLEMMRKQTAGLSGSE----RIHGHGANLLDRDVPF 245 (363)
T ss_dssp EEEEESCTTCHHHHHHHHHST-----------TCEEEEEEC-HHHHHHHHHHHTTCTTGG----GEEEEECCCCSSSCCC
T ss_pred EEEEeCCCcCHHHHHHHHhCC-----------CCEEEEEeC-HHHHHHHHHHHHhcCccc----ceEEEEccccccCCCC
Confidence 689999999999999999864 679999999 999999999988766543 899999998875 35
Q ss_pred CCCCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 80 ESDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
+ ++||+|++.+++|++++. ..++.++++.|+|||++++.|...+.
T Consensus 246 p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 246 P-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp C-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred C-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 5 789999999999988754 57899999999999999999876544
No 53
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.78 E-value=4.3e-18 Score=118.27 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=91.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...+..+ ++++...|+. .+.+.
T Consensus 172 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~-~~~p~ 234 (332)
T 3i53_A 172 HVVDVGGGSGGLLSALLTAHE-----------DLSGTVLDL-QGPASAAHRRFLDTGLSG----RAQVVVGSFF-DPLPA 234 (332)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHHHHHHHHHHTTCTT----TEEEEECCTT-SCCCC
T ss_pred EEEEeCCChhHHHHHHHHHCC-----------CCeEEEecC-HHHHHHHHHhhhhcCcCc----CeEEecCCCC-CCCCC
Confidence 699999999999999998865 678999999 999999999988776554 8999999986 34444
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
+||+|++.+++|++++. .+++.++++.|+|||++++.|...+.
T Consensus 235 -~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 235 -GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred -CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 79999999999999874 78999999999999999999876544
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.78 E-value=2.2e-18 Score=112.53 Aligned_cols=97 Identities=23% Similarity=0.152 Sum_probs=84.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.++..++++. ++.+...|+...+ ..
T Consensus 46 ~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~ 100 (211)
T 3e23_A 46 KILELGCGAGYQAEAMLAA-------------GFDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AI 100 (211)
T ss_dssp EEEESSCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CC
T ss_pred cEEEECCCCCHHHHHHHHc-------------CCeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CC
Confidence 6999999999999988875 468999999999999999886 3456778888777 67
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..++++++ ++..++.++.+.|+|||++++.....
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 8899999999999998 78899999999999999999875443
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.78 E-value=2.9e-18 Score=116.97 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=89.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-E 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~ 80 (131)
+|||+|||+|..+..+++. +..+++++|+|+.+++.++++....+... ++.++..|+.+.++ .
T Consensus 67 ~vLDiGcG~G~~~~~l~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 130 (298)
T 1ri5_A 67 SVLDLGCGKGGDLLKYERA------------GIGEYYGVDIAEVSINDARVRARNMKRRF----KVFFRAQDSYGRHMDL 130 (298)
T ss_dssp EEEEETCTTTTTHHHHHHH------------TCSEEEEEESCHHHHHHHHHHHHTSCCSS----EEEEEESCTTTSCCCC
T ss_pred eEEEECCCCCHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHhcCCCc----cEEEEECCccccccCC
Confidence 6999999999998887765 24589999999999999999988765433 78999999988876 5
Q ss_pred CCCeeEEEEcccccc----ccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRN----VTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~----~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..++++ ..+...++.++.++|+|||++++....
T Consensus 131 ~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 678999999999876 457789999999999999999987654
No 56
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=112.91 Aligned_cols=105 Identities=22% Similarity=0.277 Sum_probs=89.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++..... ++.+...|+.+.+++
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~------------~~~v~~~D~s~~~~~~a~~~~~~~~-------~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGG------------FPNVTSVDYSSVVVAAMQACYAHVP-------QLRWETMDVRKLDFP 104 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTT------------CCCEEEEESCHHHHHHHHHHTTTCT-------TCEEEECCTTSCCSC
T ss_pred CeEEEECCCCcHHHHHHHHcC------------CCcEEEEeCCHHHHHHHHHhcccCC-------CcEEEEcchhcCCCC
Confidence 369999999999999888762 2389999999999999999876422 799999999888777
Q ss_pred CCCeeEEEEcccccccc---------------CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVT---------------RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~---------------~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++..+++++. +...++.++.++|+|||++++.++..+
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 78999999988876543 568899999999999999999887654
No 57
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.78 E-value=3e-18 Score=110.82 Aligned_cols=109 Identities=16% Similarity=0.116 Sum_probs=89.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+++++...+..+ +++++..|+.+.+ .
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~ 89 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVG----------ENGRVFGFDIQDKAIANTTKKLTDLNLID----RVTLIKDGHQNMDKY 89 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHC----------TTCEEEEECSCHHHHHHHHHHHHHTTCGG----GEEEECSCGGGGGGT
T ss_pred CEEEEcCCCCCHHHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----CeEEEECCHHHHhhh
Confidence 3699999999999999998864 25699999999999999999998866533 8999999988775 5
Q ss_pred CCCCeeEEEEcccccc---------ccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 ESDSYSAYTIAFGIRN---------VTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~---------~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
..++||+|++...+.. ..+...++.++.++|+|||++++..+..
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 5678999998765411 1134679999999999999999987654
No 58
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.78 E-value=1.8e-18 Score=118.04 Aligned_cols=106 Identities=19% Similarity=0.131 Sum_probs=87.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++........ ...++.+...|+..++
T Consensus 60 ~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 60 RVLDVACGTGVDSIMLVEE-------------GFSVTSVDASDKMLKYALKERWNRRKEP-AFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp EEEETTCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTTSH-HHHTCEEEECCGGGHHHHS
T ss_pred EEEEecCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHhhhhccccc-ccceeeEeecChhhCcccc
Confidence 6999999999999988876 4599999999999999988763321110 0015788888988776
Q ss_pred CCCCCeeEEEEc-cccccccC-------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 IESDSYSAYTIA-FGIRNVTR-------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ~~~~~~D~i~~~-~~l~~~~~-------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+..++||+|++. .+++++++ +..++.++.+.|+|||++++...
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 677899999998 89999998 89999999999999999988654
No 59
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.77 E-value=3.4e-18 Score=115.65 Aligned_cols=111 Identities=16% Similarity=0.034 Sum_probs=92.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHH------HHHHHHHHhhhccCCCCCCCceeEEecc-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA------MLDVGEQRARDLFKVPVPNPRLRFLEAN- 73 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 73 (131)
.+|||+|||+|.++..+++..+ +..+++++|+|+. +++.+++++...+..+ +++++..|
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g----------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~ 110 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVG----------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD----RLTVHFNTN 110 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHC----------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG----GEEEECSCC
T ss_pred CEEEEeCCCCCHHHHHHHHHhC----------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC----ceEEEECCh
Confidence 3699999999999999998863 2478999999997 9999999988765543 79999998
Q ss_pred --cccCCCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 74 --AEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 74 --~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
....+++.++||+|++..+++++++...++..+.++++|||++++.++..+.
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 3444566789999999999999999988777777777889999998877643
No 60
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.77 E-value=6.2e-18 Score=115.43 Aligned_cols=101 Identities=11% Similarity=0.107 Sum_probs=85.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..++.... +.+|+++|+|+++++.|+++++..+. + +++++.+|+.+++
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~-----------ga~V~gIDis~~~l~~Ar~~~~~~gl-~----~v~~v~gDa~~l~-- 185 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVY-----------GMRVNVVEIEPDIAELSRKVIEGLGV-D----GVNVITGDETVID-- 185 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTT-----------CCEEEEEESSHHHHHHHHHHHHHHTC-C----SEEEEESCGGGGG--
T ss_pred CEEEEECCCccHHHHHHHHHcc-----------CCEEEEEECCHHHHHHHHHHHHhcCC-C----CeEEEECchhhCC--
Confidence 4799999999988766555433 67999999999999999999988776 3 8999999998865
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++... .++..+++.++.+.|||||++++.+..
T Consensus 186 d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 186 GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 678999998654 578899999999999999999987643
No 61
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.77 E-value=7e-18 Score=114.85 Aligned_cols=101 Identities=12% Similarity=0.017 Sum_probs=88.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+. +++++..|+...+. .
T Consensus 123 ~vLD~GcG~G~~~~~l~~~-------------g~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~-~ 182 (286)
T 3m70_A 123 KVLDLGCGQGRNSLYLSLL-------------GYDVTSWDHNENSIAFLNETKEKENL------NISTALYDINAANI-Q 182 (286)
T ss_dssp EEEEESCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGGCCC-C
T ss_pred cEEEECCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHHcCC------ceEEEEeccccccc-c
Confidence 6999999999999988876 45899999999999999999887653 68999999988766 6
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++..++++++ +...++.++.+.|+|||+++++...
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 7899999999999885 4679999999999999998776543
No 62
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.77 E-value=4.1e-18 Score=110.51 Aligned_cols=104 Identities=21% Similarity=0.229 Sum_probs=87.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+. ++.+...|+...+++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~ 92 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-------------GYEVTAVDQSSVGLAKAKQLAQEKGV------KITTVQSNLADFDIVA 92 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-------------TCEEEEECSSHHHHHHHHHHHHHHTC------CEEEECCBTTTBSCCT
T ss_pred CEEEECCCCCHhHHHHHhC-------------CCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcChhhcCCCc
Confidence 5899999999999888775 45899999999999999999876542 6899999998887777
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++.+......+....+.++.+.|+|||++++..+...
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 8999999965433234778999999999999999999876644
No 63
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=7.7e-19 Score=116.71 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=83.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--PI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~ 79 (131)
+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++....+ .++.++..|+.+. ++
T Consensus 63 ~vLDiGcGtG~~~~~l~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~ 124 (236)
T 1zx0_A 63 RVLEVGFGMAIAASKVQEAP------------IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp EEEEECCTTSHHHHHHHTSC------------EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGS
T ss_pred eEEEEeccCCHHHHHHHhcC------------CCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhccc
Confidence 69999999999998886541 3489999999999999999887654 2799999998887 77
Q ss_pred CCCCeeEEEE-cccc--cc--ccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 ESDSYSAYTI-AFGI--RN--VTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~~~~~D~i~~-~~~l--~~--~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++++||+|++ .+.+ +. ..++..++.+++++|||||++++.++.
T Consensus 125 ~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 125 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 8889999999 5554 11 123457799999999999999987654
No 64
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.76 E-value=1.2e-17 Score=117.73 Aligned_cols=106 Identities=13% Similarity=0.057 Sum_probs=92.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...++.+ ++++...|+. .+.+.
T Consensus 205 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~l~~----~v~~~~~d~~-~~~p~ 267 (369)
T 3gwz_A 205 TAVDIGGGRGSLMAAVLDAFP-----------GLRGTLLER-PPVAEEARELLTGRGLAD----RCEILPGDFF-ETIPD 267 (369)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHHHHHHHHHHTTCTT----TEEEEECCTT-TCCCS
T ss_pred EEEEeCCCccHHHHHHHHHCC-----------CCeEEEEcC-HHHHHHHHHhhhhcCcCC----ceEEeccCCC-CCCCC
Confidence 699999999999999998864 678999999 999999999988776554 8999999987 34444
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.||+|++.+++|++++.. +++.++++.|+|||++++.|...+.
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 799999999999998765 7999999999999999999877654
No 65
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=2.1e-18 Score=115.01 Aligned_cols=104 Identities=9% Similarity=0.112 Sum_probs=88.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+|+.+++.++++... .+++++..|+.+.+..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~-------------~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~ 116 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQF-------------FPRVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQA 116 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHH-------------SSCEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHH
T ss_pred CeEEEEcCCCCHHHHHHHHh-------------CCCEEEEECCHHHHHHHHHhCcc--------cCceEEECcccccccc
Confidence 36999999999999999886 34899999999999999988732 2799999998875432
Q ss_pred C-----CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 S-----DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~-----~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
. ..||+|++..++++++ +...++.++.+.|||||++++.++..+.
T Consensus 117 ~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 117 AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 1 3499999999999998 8899999999999999999999887543
No 66
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.76 E-value=3.3e-18 Score=112.76 Aligned_cols=103 Identities=14% Similarity=-0.023 Sum_probs=86.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-- 78 (131)
.|||+|||+|..+..+++..+ ..+++|+|+|+.++..++++....+.. +++++..|+.+. +
T Consensus 37 ~vLDiGcG~G~~~~~lA~~~p-----------~~~v~giD~s~~~l~~a~~~~~~~~l~-----nv~~~~~Da~~~l~~~ 100 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAKDRP-----------EQDFLGIEVHSPGVGACLASAHEEGLS-----NLRVMCHDAVEVLHKM 100 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHCT-----------TSEEEEECSCHHHHHHHHHHHHHTTCS-----SEEEECSCHHHHHHHH
T ss_pred eEEEEeeeChHHHHHHHHHCC-----------CCeEEEEEecHHHHHHHHHHHHHhCCC-----cEEEEECCHHHHHHHH
Confidence 689999999999999988754 678999999999999999998877654 799999998774 3
Q ss_pred CCCCCeeEEEEccccccccCH--------HHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVTRI--------DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~--------~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++.++||.|++.+...+.... ..++.++.+.|||||++++..
T Consensus 101 ~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 101 IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 677899999998665544322 258999999999999998864
No 67
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=4.1e-18 Score=114.68 Aligned_cols=96 Identities=17% Similarity=0.213 Sum_probs=83.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. ++.++..|+.+.+. .
T Consensus 53 ~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~-~ 108 (263)
T 3pfg_A 53 SLLDVACGTGMHLRHLADS-------------FGTVEGLELSADMLAIARRRNP----------DAVLHHGDMRDFSL-G 108 (263)
T ss_dssp EEEEETCTTSHHHHHHTTT-------------SSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTCCC-S
T ss_pred cEEEeCCcCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHhhCC----------CCEEEECChHHCCc-c
Confidence 6999999999999988775 4589999999999999988753 68899999988776 6
Q ss_pred CCeeEEEEcc-cccccc---CHHHHHHHHHHhccCCcEEEEEec
Q psy890 82 DSYSAYTIAF-GIRNVT---RIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 82 ~~~D~i~~~~-~l~~~~---~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
++||+|++.. ++++++ +...++.++.++|+|||++++..+
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7899999998 899885 667889999999999999988644
No 68
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.76 E-value=7.2e-18 Score=111.98 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=86.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+. ++.++..|+.+.+++
T Consensus 40 ~vLdiG~G~G~~~~~l~~~-------------~~~~~~~D~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~- 99 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPK-------------FKNTWAVDLSQEMLSEAENKFRSQGL------KPRLACQDISNLNIN- 99 (246)
T ss_dssp EEEEETCTTSTTHHHHGGG-------------SSEEEEECSCHHHHHHHHHHHHHTTC------CCEEECCCGGGCCCS-
T ss_pred eEEEeCCCCCHHHHHHHHC-------------CCcEEEEECCHHHHHHHHHHHhhcCC------CeEEEecccccCCcc-
Confidence 6999999999999988876 46899999999999999998876542 688999999887766
Q ss_pred CCeeEEEEcc-ccccc---cCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAF-GIRNV---TRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~-~l~~~---~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|++.. +++++ ++...++.++.++|+|||++++..
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7899999998 99998 577899999999999999998743
No 69
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.76 E-value=1.7e-17 Score=108.78 Aligned_cols=103 Identities=12% Similarity=0.067 Sum_probs=86.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.++..++++....+.. ++.++..|+..++ +
T Consensus 44 ~vLDiGcG~G~~~~~la~~~p-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~ 107 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQNP-----------DINYIGIDIQKSVLSYALDKVLEVGVP-----NIKLLWVDGSDLTDYF 107 (214)
T ss_dssp EEEEESCTTSHHHHHHHHHCT-----------TSEEEEEESCHHHHHHHHHHHHHHCCS-----SEEEEECCSSCGGGTS
T ss_pred eEEEEccCcCHHHHHHHHHCC-----------CCCEEEEEcCHHHHHHHHHHHHHcCCC-----CEEEEeCCHHHHHhhc
Confidence 589999999999999988754 679999999999999999998877653 8999999988865 6
Q ss_pred CCCCeeEEEEcccccccc--------CHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVT--------RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~--------~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+.++||+|++++...+.. ....++.++.+.|+|||++++..
T Consensus 108 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 108 EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 677899999987654433 12678999999999999998854
No 70
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.76 E-value=6.7e-18 Score=116.16 Aligned_cols=109 Identities=10% Similarity=0.120 Sum_probs=80.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCC-CCCceeEEeccc------
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPV-PNPRLRFLEANA------ 74 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~------ 74 (131)
+|||+|||+|..+..++.. ...+|+|+|+|+.|++.|+++....+.... +..++.+...|+
T Consensus 51 ~VLDlGCG~G~~l~~~~~~------------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~ 118 (302)
T 2vdw_A 51 KVLAIDFGNGADLEKYFYG------------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFV 118 (302)
T ss_dssp EEEETTCTTTTTHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHH
T ss_pred eEEEEecCCcHhHHHHHhc------------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhh
Confidence 6999999999766655443 246899999999999999998865432100 000256777776
Q ss_pred ccC--CCCCCCeeEEEEccccccc---cCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 75 EEL--PIESDSYSAYTIAFGIRNV---TRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 75 ~~~--~~~~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++ +++.++||+|+|.+++|++ .+...++.++.++|||||++++....
T Consensus 119 ~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 119 SSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 222 2455789999999999865 35689999999999999999887654
No 71
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=2.6e-17 Score=107.06 Aligned_cols=102 Identities=12% Similarity=0.029 Sum_probs=86.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++....+.. +++++..|+.+.....
T Consensus 43 ~vLDiG~G~G~~~~~la~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 43 VMWDIGAGSASVSIEASNLMP-----------NGRIFALERNPQYLGFIRDNLKKFVAR-----NVTLVEAFAPEGLDDL 106 (204)
T ss_dssp EEEEETCTTCHHHHHHHHHCT-----------TSEEEEEECCHHHHHHHHHHHHHHTCT-----TEEEEECCTTTTCTTS
T ss_pred EEEEECCCCCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeCChhhhhhcC
Confidence 699999999999999988743 579999999999999999998877653 8999999986643333
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.+||+|++...++ +...++.++.+.|+|||++++....
T Consensus 107 ~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 107 PDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6799999987665 7889999999999999999987654
No 72
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=5e-18 Score=112.92 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=82.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~ 78 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++ +.++..|..+. +
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~ 96 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-------------GIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKS 96 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-------------TCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHT
T ss_pred CeEEEEeCCCCHHHHHHHhC-------------CCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhh
Confidence 36999999999999888775 45799999999999988754 45677787664 6
Q ss_pred CCCCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 79 IESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++.++||+|++..++++++ +...++.++.+.|||||++++.....
T Consensus 97 ~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp SCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred cCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 7778999999999999998 55999999999999999999876553
No 73
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.76 E-value=1e-17 Score=109.93 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=85.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
.|||+|||+|.++..+++..+ ..+++++|+|+.++..++++....+.. ++.++..|+..++ +
T Consensus 41 ~vLDiGcG~G~~~~~la~~~p-----------~~~v~giD~s~~~l~~a~~~~~~~~~~-----nv~~~~~d~~~l~~~~ 104 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQNP-----------DINYIGIELFKSVIVTAVQKVKDSEAQ-----NVKLLNIDADTLTDVF 104 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHCT-----------TSEEEEECSCHHHHHHHHHHHHHSCCS-----SEEEECCCGGGHHHHC
T ss_pred eEEEEecCCCHHHHHHHHHCC-----------CCCEEEEEechHHHHHHHHHHHHcCCC-----CEEEEeCCHHHHHhhc
Confidence 589999999999999988754 679999999999999999998876653 7999999988764 6
Q ss_pred CCCCeeEEEEccccccccC--------HHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTR--------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~--------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+.++||.|++.+...+... ...++.++.++|+|||.+++..
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 6778999988765443321 3678999999999999998864
No 74
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.75 E-value=7.1e-18 Score=117.06 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=92.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++..+ ..+++++|++ .+++.+++++...+..+ +++++..|+.+.+++.
T Consensus 168 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~~-~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 231 (335)
T 2r3s_A 168 KVLDISASHGLFGIAVAQHNP-----------NAEIFGVDWA-SVLEVAKENARIQGVAS----RYHTIAGSAFEVDYGN 231 (335)
T ss_dssp EEEEETCTTCHHHHHHHHHCT-----------TCEEEEEECH-HHHHHHHHHHHHHTCGG----GEEEEESCTTTSCCCS
T ss_pred EEEEECCCcCHHHHHHHHHCC-----------CCeEEEEecH-HHHHHHHHHHHhcCCCc----ceEEEecccccCCCCC
Confidence 689999999999999988864 5799999999 99999999987766543 7999999988766554
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.||+|++.+++|+++ +...++.++.+.|+|||++++.+...+.
T Consensus 232 -~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 232 -DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred -CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 499999999999995 4579999999999999999999877654
No 75
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.4e-17 Score=107.19 Aligned_cols=104 Identities=10% Similarity=-0.021 Sum_probs=87.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++...+.. +++++..|+.+.. +
T Consensus 47 ~vLDlgcG~G~~~~~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~ 109 (189)
T 3p9n_A 47 AVLDLYAGSGALGLEALSR------------GAASVLFVESDQRSAAVIARNIEALGLS-----GATLRRGAVAAVVAAG 109 (189)
T ss_dssp EEEEETCTTCHHHHHHHHT------------TCSEEEEEECCHHHHHHHHHHHHHHTCS-----CEEEEESCHHHHHHHC
T ss_pred EEEEeCCCcCHHHHHHHHC------------CCCeEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEccHHHHHhhc
Confidence 6899999999999877664 2568999999999999999999887653 8999999987753 3
Q ss_pred CCCCeeEEEEccccccc-cCHHHHHHHHHH--hccCCcEEEEEecc
Q psy890 80 ESDSYSAYTIAFGIRNV-TRIDKALSEAYR--VLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~-~~~~~~l~~~~~--~L~p~G~l~~~~~~ 122 (131)
+.++||+|++....++. ++....+..+.+ +|+|||++++....
T Consensus 110 ~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 46789999998877664 678899999999 99999999886544
No 76
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.75 E-value=2e-17 Score=112.42 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=86.9
Q ss_pred ceeeeeccc---chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC
Q psy890 2 YILFYLVFP---GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP 78 (131)
Q Consensus 2 ~iLdig~G~---G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (131)
.|||+|||+ |.++..+.+..+ ..+++++|+|+.|+..+++++.... +++++.+|+.+..
T Consensus 80 ~vLDlGcG~pt~G~~~~~~~~~~p-----------~~~v~~vD~sp~~l~~Ar~~~~~~~-------~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 80 QFLDLGSGLPTVQNTHEVAQSVNP-----------DARVVYVDIDPMVLTHGRALLAKDP-------NTAVFTADVRDPE 141 (274)
T ss_dssp EEEEETCCSCCSSCHHHHHHHHCT-----------TCEEEEEESSHHHHHHHHHHHTTCT-------TEEEEECCTTCHH
T ss_pred EEEEECCCCCCCChHHHHHHHhCC-----------CCEEEEEECChHHHHHHHHhcCCCC-------CeEEEEeeCCCch
Confidence 689999999 988766655543 6799999999999999999885432 8999999986531
Q ss_pred -----------CCCCCeeEEEEccccccccC--HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 79 -----------IESDSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 79 -----------~~~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++.++||+|++..++|++++ ...++.++.+.|+|||++++.+...
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 23357999999999999986 8899999999999999999988765
No 77
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.75 E-value=2.3e-17 Score=115.70 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=92.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...+..+ +++++..|+.+.+++.
T Consensus 193 ~vLDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 193 KMIDVGGGIGDISAAMLKHFP-----------ELDSTILNL-PGAIDLVNENAAEKGVAD----RMRGIAVDIYKESYPE 256 (359)
T ss_dssp EEEEESCTTCHHHHHHHHHCT-----------TCEEEEEEC-GGGHHHHHHHHHHTTCTT----TEEEEECCTTTSCCCC
T ss_pred EEEEECCcccHHHHHHHHHCC-----------CCeEEEEec-HHHHHHHHHHHHhcCCCC----CEEEEeCccccCCCCC
Confidence 699999999999999998864 679999999 999999999988766553 7999999998776543
Q ss_pred CCeeEEEEccccccccC--HHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
+|+|++.+++|++++ ...++.++++.|+|||++++.+...+.
T Consensus 257 --~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 257 --ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp --CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred --CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 399999999999987 789999999999999999999866543
No 78
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.74 E-value=1.5e-17 Score=110.84 Aligned_cols=99 Identities=20% Similarity=0.142 Sum_probs=84.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE- 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~- 80 (131)
+|||+|||+|..+..++...+ ..+++++|+|+.+++.++++....+.. +++++..|+.++++.
T Consensus 73 ~vLDiG~G~G~~~~~la~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~ 136 (240)
T 1xdz_A 73 TICDVGAGAGFPSLPIKICFP-----------HLHVTIVDSLNKRITFLEKLSEALQLE-----NTTFCHDRAETFGQRK 136 (240)
T ss_dssp EEEEECSSSCTTHHHHHHHCT-----------TCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEESCHHHHTTCT
T ss_pred EEEEecCCCCHHHHHHHHhCC-----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEeccHHHhcccc
Confidence 689999999999998887533 678999999999999999998877654 799999998877643
Q ss_pred --CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 --SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 --~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.++||+|++.. +.++..++..+.++|+|||++++..
T Consensus 137 ~~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 137 DVRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp TTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 57899999865 4678899999999999999998864
No 79
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.74 E-value=5.3e-18 Score=114.45 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=80.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCC--------------C----
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPV--------------P---- 63 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~--------------~---- 63 (131)
+|||+|||+|..+..++.. ...+|+++|+|+.|++.++++++.....-. .
T Consensus 58 ~vLDiGCG~G~~~~~~~~~------------~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~ 125 (263)
T 2a14_A 58 TLIDIGSGPTIYQVLAACD------------SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWE 125 (263)
T ss_dssp EEEESSCTTCCGGGTTGGG------------TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHH
T ss_pred eEEEeCCCccHHHHHHHHh------------hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchh
Confidence 6999999999877655543 134799999999999999887643210000 0
Q ss_pred ------CCcee-EEecccccC-CC---CCCCeeEEEEccccccc----cCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 64 ------NPRLR-FLEANAEEL-PI---ESDSYSAYTIAFGIRNV----TRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 64 ------~~~~~-~~~~d~~~~-~~---~~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
..++. ++..|+.+. ++ ..++||+|++++++++. ++....+.+++++|||||++++....
T Consensus 126 ~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 126 EKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 00233 788887773 33 24689999999999875 45678999999999999999998644
No 80
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.74 E-value=1e-17 Score=116.37 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=91.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...+..+ +++++..|+.+ +++
T Consensus 170 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 170 SFVDVGGGSGELTKAILQAEP-----------SARGVMLDR-EGSLGVARDNLSSLLAGE----RVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp EEEEETCTTCHHHHHHHHHCT-----------TCEEEEEEC-TTCTHHHHHHTHHHHHTT----SEEEEESCTTT-CCC-
T ss_pred EEEEeCCCchHHHHHHHHHCC-----------CCEEEEeCc-HHHHHHHHHHHhhcCCCC----cEEEecCCCCC-CCC-
Confidence 699999999999999998864 578999999 999999999887655443 89999999877 444
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++||+|++.+++|++++.. .++.++++.|+|||++++.|...+.
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 6799999999999887655 9999999999999999999876543
No 81
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=1.5e-17 Score=114.02 Aligned_cols=105 Identities=17% Similarity=0.244 Sum_probs=87.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCC--CCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKV--PVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.++++....+.. . +++++..|+.++++
T Consensus 85 ~vLDlGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~----~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL-------------GWEVTALELSTSVLAAFRKRLAEAPADVRD----RCTLVQGDMSAFAL 147 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT-------------TCCEEEEESCHHHHHHHHHHHHTSCHHHHT----TEEEEECBTTBCCC
T ss_pred cEEEEeccCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHhhccccccc----ceEEEeCchhcCCc
Confidence 6999999999999988875 468999999999999999998765321 1 79999999998876
Q ss_pred CCCCeeEEEEc-ccccccc--CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 ESDSYSAYTIA-FGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 ~~~~~D~i~~~-~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++. ..+++++ +...++.++.+.|+|||++++..+...
T Consensus 148 -~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 -DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp -SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred -CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 6789999975 4456555 468999999999999999998766553
No 82
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.74 E-value=1.7e-17 Score=105.47 Aligned_cols=102 Identities=17% Similarity=0.134 Sum_probs=83.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-CCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 80 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++....+..+ ++ ++..|..+ ++..
T Consensus 28 ~vldiG~G~G~~~~~l~~~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 28 TLWDIGGGSGSIAIEWLRSTP-----------QTTAVCFEISEERRERILSNAINLGVSD----RI-AVQQGAPRAFDDV 91 (178)
T ss_dssp EEEEESTTTTHHHHHHHTTSS-----------SEEEEEECSCHHHHHHHHHHHHTTTCTT----SE-EEECCTTGGGGGC
T ss_pred eEEEeCCCCCHHHHHHHHHCC-----------CCeEEEEeCCHHHHHHHHHHHHHhCCCC----CE-EEecchHhhhhcc
Confidence 689999999999999888753 6789999999999999999988776553 67 77777643 3332
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++...+++ ..++.++.+.|+|||++++.....
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 378999999988876 678899999999999999877554
No 83
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.74 E-value=1.2e-17 Score=112.12 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=84.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCC--------------CC----
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVP--------------VP---- 63 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~--------------~~---- 63 (131)
+|||+|||+|.++..++... ..+++++|+|+.+++.++++........ ..
T Consensus 59 ~vLDlGcG~G~~~~~l~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (265)
T 2i62_A 59 LLIDIGSGPTIYQLLSACES------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGP 126 (265)
T ss_dssp EEEEESCTTCCGGGTTGGGT------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHH
T ss_pred EEEEECCCccHHHHHHhhcc------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchH
Confidence 68999999999988877641 2489999999999999998876432000 00
Q ss_pred ------CCce-eEEecccccCC-CCC---CCeeEEEEccccc----cccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 64 ------NPRL-RFLEANAEELP-IES---DSYSAYTIAFGIR----NVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 64 ------~~~~-~~~~~d~~~~~-~~~---~~~D~i~~~~~l~----~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
..++ .+...|+.+.. .+. ++||+|++..+++ +.+++..++.++.++|+|||++++.+..
T Consensus 127 ~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 127 EKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0027 88999988754 344 7899999999999 6667889999999999999999987743
No 84
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.74 E-value=1.8e-17 Score=115.87 Aligned_cols=108 Identities=15% Similarity=0.133 Sum_probs=92.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-IE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 80 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.++++....+..+ +++++..|+.+.+ +.
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 182 TVIDLAGGHGTYLAQVLRRHP-----------QLTGQIWDL-PTTRDAARKTIHAHDLGG----RVEFFEKNLLDARNFE 245 (352)
T ss_dssp EEEEETCTTCHHHHHHHHHCT-----------TCEEEEEEC-GGGHHHHHHHHHHTTCGG----GEEEEECCTTCGGGGT
T ss_pred EEEEeCCCcCHHHHHHHHhCC-----------CCeEEEEEC-HHHHHHHHHHHHhcCCCC----ceEEEeCCcccCcccC
Confidence 699999999999999998865 679999999 889999999888766543 7999999988765 23
Q ss_pred CCCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.+.||+|++.+++|++++. ..++.++++.|+|||++++.|...+.
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 4569999999999999864 79999999999999999999876544
No 85
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=1.3e-17 Score=109.52 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=83.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++ . ++.+...++.+.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~----~-------~~~~~~~~~~~~~~~ 109 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-------------GIEAVGVDGDRTLVDAARAA----G-------AGEVHLASYAQLAEA 109 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-------------TCEEEEEESCHHHHHHHHHT----C-------SSCEEECCHHHHHTT
T ss_pred CEEEEeCCCCCHHHHHHHHC-------------CCEEEEEcCCHHHHHHHHHh----c-------ccccchhhHHhhccc
Confidence 36999999999999888776 46899999999999999877 2 667777777665
Q ss_pred CCC-CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 78 PIE-SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 78 ~~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
+.. ..+||+|++..+++ ..++..++.++.++|+|||++++.+...
T Consensus 110 ~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 110 KVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 433 34599999999999 8899999999999999999999987654
No 86
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.74 E-value=2.5e-17 Score=113.55 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=86.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCC--CCCCceeEEecccccCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVP--VPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~- 78 (131)
+|||+|||+|..+..+++. ...+++++|+|+.+++.++++........ ....++.++..|+...+
T Consensus 37 ~VLDlGcG~G~~~~~l~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 104 (313)
T 3bgv_A 37 TVLDLGCGKGGDLLKWKKG------------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELL 104 (313)
T ss_dssp EEEEETCTTTTTHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCS
T ss_pred EEEEECCCCcHHHHHHHhc------------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccch
Confidence 6999999999999888774 25689999999999999999876532000 00027899999988765
Q ss_pred ---CC--CCCeeEEEEccccccc-c---CHHHHHHHHHHhccCCcEEEEEecc
Q psy890 79 ---IE--SDSYSAYTIAFGIRNV-T---RIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 79 ---~~--~~~~D~i~~~~~l~~~-~---~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++ .++||+|++.+++|+. . +....+.++.+.|+|||++++....
T Consensus 105 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 105 IDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 43 3589999999999987 3 4579999999999999999987654
No 87
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.74 E-value=3.3e-17 Score=115.33 Aligned_cols=102 Identities=20% Similarity=0.192 Sum_probs=88.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...++.+ +++++..|+.+ +++.
T Consensus 185 ~vlDvG~G~G~~~~~l~~~~~-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 185 HVLDVGGGNGGMLAAIALRAP-----------HLRGTLVEL-AGPAERARRRFADAGLAD----RVTVAEGDFFK-PLPV 247 (374)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHHHHHHHHHHTTCTT----TEEEEECCTTS-CCSC
T ss_pred EEEEECCCcCHHHHHHHHHCC-----------CCEEEEEeC-HHHHHHHHHHHHhcCCCC----ceEEEeCCCCC-cCCC
Confidence 699999999999999998864 678999999 999999999988776554 89999999865 3333
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEec
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.||+|++.+++|++++.. .++.++.+.|+|||++++.+.
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 499999999999998764 899999999999999999887
No 88
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.73 E-value=2.4e-17 Score=110.92 Aligned_cols=98 Identities=27% Similarity=0.294 Sum_probs=83.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. . + ++..|+.+++++
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~--~-------~--~~~~d~~~~~~~ 111 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQER-------------GFEVVLVDPSKEMLEVAREKGV--K-------N--VVEAKAEDLPFP 111 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTT-------------TCEEEEEESCHHHHHHHHHHTC--S-------C--EEECCTTSCCSC
T ss_pred CeEEEeCCCcCHHHHHHHHc-------------CCeEEEEeCCHHHHHHHHhhcC--C-------C--EEECcHHHCCCC
Confidence 36999999999999988775 4689999999999999988754 1 3 778888888877
Q ss_pred CCCeeEEEEcccccc-ccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRN-VTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~-~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++...+.+ .+++..++.++.+.|+|||++++...+
T Consensus 112 ~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 889999999876544 478999999999999999999987654
No 89
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.73 E-value=1.5e-17 Score=113.42 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=78.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC-----------------CCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK-----------------VPV-- 62 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-----------------~~~-- 62 (131)
+|||+|||+|..+..++.. . ..+|+++|+|+.|++.++++++.... ...
T Consensus 74 ~vLDiGcG~G~~~~l~~~~-~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (289)
T 2g72_A 74 TLIDIGSGPTVYQLLSACS-H-----------FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQ 141 (289)
T ss_dssp EEEEETCTTCCGGGTTGGG-G-----------CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHH
T ss_pred eEEEECCCcChHHHHhhcc-C-----------CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchh
Confidence 6999999999954433332 2 56899999999999999886542110 000
Q ss_pred ------CCCceeEEeccccc-CCC-----CCCCeeEEEEcccccc----ccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 63 ------PNPRLRFLEANAEE-LPI-----ESDSYSAYTIAFGIRN----VTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 63 ------~~~~~~~~~~d~~~-~~~-----~~~~~D~i~~~~~l~~----~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+...+.++..|+.. .++ +.++||+|++++++++ ++++..++.++.++|||||++++..
T Consensus 142 ~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 142 DKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 00014566778776 443 3467999999999999 6678999999999999999999875
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.73 E-value=5.4e-17 Score=104.07 Aligned_cols=105 Identities=18% Similarity=0.176 Sum_probs=87.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+... .+++++..|+.+. ...
T Consensus 55 ~vLdiG~G~G~~~~~~~~~-------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~---~~~~~~~~d~~~~-~~~ 117 (194)
T 1dus_A 55 DILDLGCGYGVIGIALADE-------------VKSTTMADINRRAIKLAKENIKLNNLDN---YDIRVVHSDLYEN-VKD 117 (194)
T ss_dssp EEEEETCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHHHHTTCTT---SCEEEEECSTTTT-CTT
T ss_pred eEEEeCCCCCHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECchhcc-ccc
Confidence 6999999999999988876 4689999999999999999988765431 0289999998773 446
Q ss_pred CCeeEEEEcccccc-ccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRN-VTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~-~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|+++..+++ ..+....+.++.+.|+|||++++.....
T Consensus 118 ~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 78999999888776 4567899999999999999999987664
No 91
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.73 E-value=2.4e-17 Score=109.21 Aligned_cols=99 Identities=14% Similarity=0.198 Sum_probs=83.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++.. .+++++|+|+.+++.++++.. ++.++..|+.+.+. .
T Consensus 43 ~vLdiG~G~G~~~~~l~~~~-------------~~v~~~D~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 43 SLLDVACGTGTHLEHFTKEF-------------GDTAGLELSEDMLTHARKRLP----------DATLHQGDMRDFRL-G 98 (239)
T ss_dssp EEEEETCTTSHHHHHHHHHH-------------SEEEEEESCHHHHHHHHHHCT----------TCEEEECCTTTCCC-S
T ss_pred eEEEecccCCHHHHHHHHhC-------------CcEEEEeCCHHHHHHHHHhCC----------CCEEEECCHHHccc-C
Confidence 69999999999999988873 389999999999999988741 68899999988766 5
Q ss_pred CCeeEEEEcc-cccccc---CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAF-GIRNVT---RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~-~l~~~~---~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++.+ ++++++ +...++.++.+.|+|||++++.++..+
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 7899999654 788874 567899999999999999998765443
No 92
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=9.9e-18 Score=111.61 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=83.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--PI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~ 79 (131)
+|||||||+|..+..+++.. ..+++++|+|+.+++.++++....+ .+++++..|.... ++
T Consensus 63 rVLdiG~G~G~~~~~~~~~~------------~~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 63 RVLEVGFGMAIAASKVQEAP------------IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp EEEEECCTTSHHHHHHTTSC------------EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGS
T ss_pred eEEEECCCccHHHHHHHHhC------------CcEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHhhcccc
Confidence 69999999999988887753 3579999999999999999887655 2688888887654 46
Q ss_pred CCCCeeEEEE-----ccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTI-----AFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~-----~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+.++||.|+. ...+++.++...++.++.|+|||||+|.+.+
T Consensus 125 ~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 125 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 6788999975 4445667788999999999999999998754
No 93
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=1.1e-16 Score=104.38 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=83.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+++.+++.++++.+..+..+ +++++..|+.+....
T Consensus 57 ~~vLDlGcG~G~~~~~la~~-------------~~~v~~vD~s~~~~~~a~~~~~~~g~~~----~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLA-------------GGRAITIEPRADRIENIQKNIDTYGLSP----RMRAVQGTAPAALAD 119 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEESCTTGGGTT
T ss_pred CEEEEecCCCCHHHHHHHHc-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CEEEEeCchhhhccc
Confidence 36999999999999988886 4689999999999999999988877654 799999998874223
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
...||+|++...+ +.. ++.++.+.|+|||++++....
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 3579999987644 455 999999999999999886654
No 94
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.73 E-value=4.5e-17 Score=114.05 Aligned_cols=100 Identities=11% Similarity=0.053 Sum_probs=86.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +..+++++|+| +++..++++....++.+ +++++.+|+.+.+++.
T Consensus 69 ~VLDvGcG~G~~~~~la~~------------g~~~v~gvD~s-~~l~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 131 (349)
T 3q7e_A 69 VVLDVGSGTGILCMFAAKA------------GARKVIGIECS-SISDYAVKIVKANKLDH----VVTIIKGKVEEVELPV 131 (349)
T ss_dssp EEEEESCTTSHHHHHHHHT------------TCSEEEEEECS-THHHHHHHHHHHTTCTT----TEEEEESCTTTCCCSS
T ss_pred EEEEEeccchHHHHHHHHC------------CCCEEEEECcH-HHHHHHHHHHHHcCCCC----cEEEEECcHHHccCCC
Confidence 6999999999999988876 25699999999 59999999998877664 7999999999988888
Q ss_pred CCeeEEEEccc---cccccCHHHHHHHHHHhccCCcEEEE
Q psy890 82 DSYSAYTIAFG---IRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 82 ~~~D~i~~~~~---l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
++||+|++..+ +.+...+..++..+.++|||||+++.
T Consensus 132 ~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 132 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 89999999765 34446889999999999999999863
No 95
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.73 E-value=1.9e-17 Score=109.06 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=87.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ +..+++++|+++.+++.+++++...++.+ +++++..|+.+. + .
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 61 LVLELGAYCGYSAVRMARLLQ----------PGARLLTMEINPDCAAITQQMLNFAGLQD----KVTILNGASQDLIPQL 126 (221)
T ss_dssp EEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHTCGG----GEEEEESCHHHHGGGT
T ss_pred EEEEECCCCCHHHHHHHHhCC----------CCCEEEEEeCChHHHHHHHHHHHHcCCCC----ceEEEECCHHHHHHHH
Confidence 699999999999999988754 36799999999999999999998877653 799999997552 2 2
Q ss_pred C----CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 E----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ~----~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
. .++||+|++....++..+....+..+ ++|+|||++++.+...
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 2 26899999988777776666777777 9999999998865544
No 96
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.72 E-value=6e-17 Score=105.61 Aligned_cols=98 Identities=10% Similarity=0.003 Sum_probs=84.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+.. +++++..|..+....
T Consensus 79 ~~vLdiG~G~G~~~~~la~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHL-------------VQHVCSVERIKGLQWQARRRLKNLDLH-----NVSTRHGDGWQGWQA 140 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCCGG
T ss_pred CEEEEEcCCCCHHHHHHHHh-------------CCEEEEEecCHHHHHHHHHHHHHcCCC-----ceEEEECCcccCCcc
Confidence 36999999999999988886 468999999999999999999876654 799999998876555
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++...++++++ .+.+.|+|||++++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 678999999999988875 578999999999886543
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.72 E-value=8e-17 Score=105.56 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=75.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
.+|||+|||+|..+..+++..+ ..+++++|+|+.+++.+.+..+... ++.++..|....
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~-----------~~~V~gvD~s~~~l~~~~~~a~~~~-------~v~~~~~d~~~~~~~ 120 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD-----------EGIIYAVEYSAKPFEKLLELVRERN-------NIIPLLFDASKPWKY 120 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT-----------TSEEEEECCCHHHHHHHHHHHHHCS-------SEEEECSCTTCGGGT
T ss_pred CEEEEECCcCCHHHHHHHHHcC-----------CCEEEEEECCHHHHHHHHHHHhcCC-------CeEEEEcCCCCchhh
Confidence 3699999999999999988753 4689999999998877666555432 788888887663
Q ss_pred -CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++. ++||+|++... ...+...++.++.++|||||++++.-
T Consensus 121 ~~~~-~~fD~V~~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 121 SGIV-EKVDLIYQDIA--QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp TTTC-CCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-cceeEEEEecc--ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 333 78999998732 11234455899999999999998863
No 98
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.72 E-value=6.8e-17 Score=107.58 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=80.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh------ccCCCCCCCceeEEecccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD------LFKVPVPNPRLRFLEANAE 75 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~d~~ 75 (131)
.|||||||+|.++..+++..+ ...++|+|+|+.+++.+++++.. ... .++.++..|+.
T Consensus 49 ~vLDiGcG~G~~~~~la~~~p-----------~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-----~nv~~~~~d~~ 112 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPLFP-----------DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-----QNIACLRSNAM 112 (235)
T ss_dssp EEEEETCTTCHHHHHHGGGST-----------TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-----TTEEEEECCTT
T ss_pred eEEEEccCCcHHHHHHHHHCC-----------CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-----CeEEEEECcHH
Confidence 589999999999999988754 67899999999999999887653 222 27999999988
Q ss_pred c-CC--CCCCCeeEEEEccccccccC--------HHHHHHHHHHhccCCcEEEEEe
Q psy890 76 E-LP--IESDSYSAYTIAFGIRNVTR--------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 76 ~-~~--~~~~~~D~i~~~~~l~~~~~--------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ++ ++.++||.|++.+.-.+... ...++.++.++|+|||.+++..
T Consensus 113 ~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 113 KHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp TCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 6 55 66789999988665433321 1478999999999999998853
No 99
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.72 E-value=6.5e-17 Score=112.88 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=85.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +..+++++|+|+ +++.++++++..++.+ +++++..|+.+.+++.
T Consensus 67 ~VLDiGcGtG~ls~~la~~------------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 67 VVLDVGCGTGILSMFAAKA------------GAKKVLGVDQSE-ILYQAMDIIRLNKLED----TITLIKGKIEEVHLPV 129 (340)
T ss_dssp EEEEETCTTSHHHHHHHHT------------TCSEEEEEESST-HHHHHHHHHHHTTCTT----TEEEEESCTTTSCCSC
T ss_pred EEEEeeccCcHHHHHHHHc------------CCCEEEEEChHH-HHHHHHHHHHHcCCCC----cEEEEEeeHHHhcCCC
Confidence 6999999999999988875 245899999996 9999999988877654 8999999999888777
Q ss_pred CCeeEEEEcc---ccccccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAF---GIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~---~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
++||+|++.. .+.+..++..++.++.+.|||||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999876 45555677889999999999999987
No 100
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.1e-16 Score=102.74 Aligned_cols=100 Identities=17% Similarity=0.079 Sum_probs=84.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.. ++.++..|+...+++
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-------------~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~~~~ 104 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQ-------------GHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVDQIS 104 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTSCCC
T ss_pred CeEEEECCCCCHHHHHHHHC-------------CCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccCCCC
Confidence 36999999999999988875 4589999999999999988762 678899998887777
Q ss_pred CCCeeEEEEc-cccccc--cCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIA-FGIRNV--TRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~-~~l~~~--~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++. ..++++ ++...++.++.+.|+|||++++.....
T Consensus 105 ~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 7899999998 667776 356889999999999999998865443
No 101
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=1.3e-16 Score=105.88 Aligned_cols=101 Identities=12% Similarity=0.036 Sum_probs=84.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
++|||+|||+|..+..+++.++ +..+|+++|++++|++.++++..... ++..+..|....
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG----------~~G~V~avD~s~~~~~~l~~~a~~~~-------ni~~V~~d~~~p~~~ 141 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIG----------PRGRIYGVEFAPRVMRDLLTVVRDRR-------NIFPILGDARFPEKY 141 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC----------TTCEEEEEECCHHHHHHHHHHSTTCT-------TEEEEESCTTCGGGG
T ss_pred CEEEEecCcCCHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHHhhHhhc-------CeeEEEEeccCcccc
Confidence 5799999999999999999986 57899999999999999998887654 788888876553
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+...+.+|+|++.. .+..+...++.++.+.|||||++++..
T Consensus 142 ~~~~~~vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 142 RHLVEGVDGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTTCCCEEEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccceEEEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 35567899998653 344567789999999999999998864
No 102
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.71 E-value=7.9e-17 Score=108.09 Aligned_cols=100 Identities=17% Similarity=0.048 Sum_probs=85.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE- 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~- 80 (131)
+|||+|||+|..+..++...+ ..+++++|+|+.++..++++....++. +++++..|+.+.+..
T Consensus 83 ~vLDiG~G~G~~~i~la~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~l~-----~v~~~~~d~~~~~~~~ 146 (249)
T 3g89_A 83 RVLDLGTGAGFPGLPLKIVRP-----------ELELVLVDATRKKVAFVERAIEVLGLK-----GARALWGRAEVLAREA 146 (249)
T ss_dssp EEEEETCTTTTTHHHHHHHCT-----------TCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEECCHHHHTTST
T ss_pred EEEEEcCCCCHHHHHHHHHCC-----------CCEEEEEECCHHHHHHHHHHHHHhCCC-----ceEEEECcHHHhhccc
Confidence 699999999999999888754 679999999999999999999887764 799999998887542
Q ss_pred --CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 --SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 --~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++.. +.+...++..+.++|+|||++++...
T Consensus 147 ~~~~~fD~I~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 147 GHREAYARAVARA----VAPLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp TTTTCEEEEEEES----SCCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ccCCCceEEEECC----cCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 47899999864 35678899999999999999988653
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.71 E-value=6.6e-17 Score=105.19 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=84.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCC-CCCCCceeEEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKV-PVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~-- 78 (131)
+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++...+.. + +++++..|+.+..
T Consensus 56 ~vLDlGcGtG~~~~~~~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~----~v~~~~~d~~~~~~~ 119 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSR------------QAKKVTFLELDKTVANQLKKNLQTLKCSSE----QAEVINQSSLDFLKQ 119 (201)
T ss_dssp EEEETTCTTCHHHHHHHHT------------TCSEEEEECSCHHHHHHHHHHHHHTTCCTT----TEEEECSCHHHHTTS
T ss_pred eEEEcCCccCHHHHHHHHc------------cCCEEEEEECCHHHHHHHHHHHHHhCCCcc----ceEEEECCHHHHHHh
Confidence 6899999999999887664 1458999999999999999999877652 2 7999999987653
Q ss_pred CCCCC-eeEEEEccccccccCHHHHHHHH--HHhccCCcEEEEEeccCC
Q psy890 79 IESDS-YSAYTIAFGIRNVTRIDKALSEA--YRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 79 ~~~~~-~D~i~~~~~l~~~~~~~~~l~~~--~~~L~p~G~l~~~~~~~~ 124 (131)
...++ ||+|++...++ ..+....+..+ .++|+|||++++......
T Consensus 120 ~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 120 PQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred hccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 23568 99999987754 55667788888 567999999988655443
No 104
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=5.6e-17 Score=107.06 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=85.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCC-CCCCCceeEEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKV-PVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~-- 78 (131)
+|||+|||+|..+..+++.++ +..+++++|+++.+++.++++++..++. + +++++.+|+.+..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~----~i~~~~gda~~~l~~ 124 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLA----------DNTTLTCIDPESEHQRQAKALFREAGYSPS----RVRFLLSRPLDVMSR 124 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSC----------TTSEEEEECSCHHHHHHHHHHHHHTTCCGG----GEEEECSCHHHHGGG
T ss_pred CEEEEcCCchHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCcC----cEEEEEcCHHHHHHH
Confidence 699999999999999998864 3679999999999999999999887765 4 8999999976642
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+..++||+|++... ..+...++.++.++|+|||++++-+
T Consensus 125 ~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 125 LANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp SCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred hcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 33578999998653 3466778999999999999998743
No 105
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.71 E-value=9.5e-17 Score=113.54 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=87.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+|+.+++.+++++...+. +++++..|+.+.....
T Consensus 236 ~VLDlGcG~G~~~~~la~~-------------g~~V~gvDis~~al~~A~~n~~~~~~------~v~~~~~D~~~~~~~~ 296 (381)
T 3dmg_A 236 QVLDLGAGYGALTLPLARM-------------GAEVVGVEDDLASVLSLQKGLEANAL------KAQALHSDVDEALTEE 296 (381)
T ss_dssp EEEEETCTTSTTHHHHHHT-------------TCEEEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTTTTSCTT
T ss_pred EEEEEeeeCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCC------CeEEEEcchhhccccC
Confidence 6999999999999999876 46899999999999999999887653 5889999988876656
Q ss_pred CCeeEEEEcccccc-----ccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRN-----VTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~-----~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|+++..+++ ......++.++.++|+|||+++++.
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 78999999988887 4467789999999999999999864
No 106
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=9.2e-17 Score=108.13 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=84.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...++.+ +++++..|+.+.. +
T Consensus 52 ~vLDlG~G~G~~~~~la~~~------------~~~v~gvDi~~~~~~~a~~n~~~~~~~~----~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 52 KIIDLCSGNGIIPLLLSTRT------------KAKIVGVEIQERLADMAKRSVAYNQLED----QIEIIEYDLKKITDLI 115 (259)
T ss_dssp EEEETTCTTTHHHHHHHTTC------------CCEEEEECCSHHHHHHHHHHHHHTTCTT----TEEEECSCGGGGGGTS
T ss_pred EEEEcCCchhHHHHHHHHhc------------CCcEEEEECCHHHHHHHHHHHHHCCCcc----cEEEEECcHHHhhhhh
Confidence 69999999999999888763 2389999999999999999998887764 7999999988865 4
Q ss_pred CCCCeeEEEEccccccc--------------------cCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNV--------------------TRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~--------------------~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+.++||+|+++...... .+...++..+.++|+|||+++++.
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 56899999996543222 134678999999999999998854
No 107
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.71 E-value=1.3e-16 Score=111.89 Aligned_cols=103 Identities=21% Similarity=0.205 Sum_probs=89.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++++...+..+ +++++..|+.+ +++.
T Consensus 186 ~vLDvG~G~G~~~~~l~~~~~-----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 186 HVLDVGGGKGGFAAAIARRAP-----------HVSATVLEM-AGTVDTARSYLKDEGLSD----RVDVVEGDFFE-PLPR 248 (360)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-TTHHHHHHHHHHHTTCTT----TEEEEECCTTS-CCSS
T ss_pred EEEEeCCcCcHHHHHHHHhCC-----------CCEEEEecC-HHHHHHHHHHHHhcCCCC----ceEEEeCCCCC-CCCC
Confidence 699999999999999988754 678999999 999999999988776554 89999999865 3333
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.||+|++..++|++++. ..++.++.+.|+|||++++.+..
T Consensus 249 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 49999999999999866 58999999999999999999876
No 108
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.71 E-value=1.2e-16 Score=106.01 Aligned_cols=97 Identities=21% Similarity=0.300 Sum_probs=82.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. .+++++|+|+.+++.++++....+ .++.+...|+.+.+.+
T Consensus 36 ~vLdiG~G~G~~~~~l~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~- 94 (243)
T 3d2l_A 36 RIADIGCGTGTATLLLADH--------------YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRELELP- 94 (243)
T ss_dssp EEEEESCTTCHHHHHHTTT--------------SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGGCCCS-
T ss_pred eEEEecCCCCHHHHHHhhC--------------CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhhcCCC-
Confidence 6999999999998877653 479999999999999999887654 1789999999887765
Q ss_pred CCeeEEEEcc-ccccc---cCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAF-GIRNV---TRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~-~l~~~---~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++||+|++.. +++++ .+....+.++.++|+|||++++.
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 7899999986 88887 46678899999999999999873
No 109
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.70 E-value=1.3e-16 Score=104.92 Aligned_cols=97 Identities=9% Similarity=0.072 Sum_probs=82.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc--CC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE--LP 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~ 78 (131)
.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. ..+...|+.. .+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-------------~~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~ 88 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKEN-------------GTRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMP 88 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTT-------------TCEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCC
T ss_pred CcEEEeCCCCCHHHHHHHhc-------------CCeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCC
Confidence 36999999999999988775 368999999999999887653 2467778765 45
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++.++||+|++..++++++++..++.++.+.|+|||++++....
T Consensus 89 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 89 YEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp SCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 66788999999999999999999999999999999999987644
No 110
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.70 E-value=1.7e-16 Score=105.03 Aligned_cols=95 Identities=14% Similarity=0.094 Sum_probs=79.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc----
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE---- 76 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---- 76 (131)
.+|||+|||+|..+..+++..+ ..+++++|+|+.+++.++++..... ++.++..|+..
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~-------~v~~~~~d~~~~~~~ 137 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIAD-----------KGIVYAIEYAPRIMRELLDACAERE-------NIIPILGDANKPQEY 137 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTT-----------TSEEEEEESCHHHHHHHHHHTTTCT-------TEEEEECCTTCGGGG
T ss_pred CEEEEEcccCCHHHHHHHHHcC-----------CcEEEEEECCHHHHHHHHHHhhcCC-------CeEEEECCCCCcccc
Confidence 3699999999999999988753 4689999999999999998876542 89999999887
Q ss_pred CCCCCCCeeEEEEccccccccCH---HHHHHHHHHhccCCcEEEEE
Q psy890 77 LPIESDSYSAYTIAFGIRNVTRI---DKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 77 ~~~~~~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~p~G~l~~~ 119 (131)
.++. .+||+|+ ++++++ ..++.++.+.|+|||++++.
T Consensus 138 ~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 5555 7899998 344554 77799999999999999885
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.70 E-value=2.2e-16 Score=102.70 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=83.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..++...+ ..+++++|+|+.+++.++++....+.. ++++...|+.+.+ +.
T Consensus 68 ~vLDiG~G~G~~~~~l~~~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~-~~ 130 (207)
T 1jsx_A 68 RFIDVGTGPGLPGIPLSIVRP-----------EAHFTLLDSLGKRVRFLRQVQHELKLE-----NIEPVQSRVEEFP-SE 130 (207)
T ss_dssp EEEEETCTTTTTHHHHHHHCT-----------TSEEEEEESCHHHHHHHHHHHHHTTCS-----SEEEEECCTTTSC-CC
T ss_pred eEEEECCCCCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEecchhhCC-cc
Confidence 689999999999999988754 679999999999999999998876643 6899999988765 45
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|++.. +.+...++..+.+.|+|||++++..
T Consensus 131 ~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 131 PPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 6899999753 3677899999999999999998864
No 112
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.70 E-value=1.7e-16 Score=106.37 Aligned_cols=105 Identities=12% Similarity=0.016 Sum_probs=86.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~ 79 (131)
.+|||+|||+|..+..+++.++ +..+++++|+++.+++.+++++...++.+ +++++..|+.+. +.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~----~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELP----------ADGQLLTLEADAHHAQVARENLQLAGVDQ----RVTLREGPALQSLES 130 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSC----------TTCEEEEEECCHHHHHHHHHHHHHTTCTT----TEEEEESCHHHHHHT
T ss_pred CEEEEecCCchHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEEcCHHHHHHh
Confidence 3699999999999999988764 36799999999999999999998877664 899999997663 32
Q ss_pred C--CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 E--SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~--~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
. .++||+|++... ..+...++.++.++|+|||++++.+..
T Consensus 131 ~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred cCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 2 348999998653 456678899999999999999886544
No 113
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=1.6e-16 Score=106.15 Aligned_cols=98 Identities=23% Similarity=0.367 Sum_probs=81.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+. ++.++..|+.+.+.+
T Consensus 44 ~vLDlGcG~G~~~~~l~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~~~- 103 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAER-------------GYEVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIAFK- 103 (252)
T ss_dssp EEEEETCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCCCC-
T ss_pred EEEEeCCCCCHHHHHHHHC-------------CCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcccC-
Confidence 6999999999999988875 46899999999999999998876542 689999999887654
Q ss_pred CCeeEEEEccc-cccc--cCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFG-IRNV--TRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~-l~~~--~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++||+|++.+. +++. .+....+.++.+.|+|||++++.
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 67999998643 3333 35778999999999999998763
No 114
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.70 E-value=1.5e-16 Score=107.99 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=80.5
Q ss_pred ceeeeecccchh----hHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc----c---------------
Q psy890 2 YILFYLVFPGDI----AFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL----F--------------- 58 (131)
Q Consensus 2 ~iLdig~G~G~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~----~--------------- 58 (131)
+|+|+|||||.. ++.+++..+... ...+++++|+|+.+++.|+++.... .
T Consensus 108 rIld~GCgTGee~ysiAi~L~e~~~~~~-------~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~ 180 (274)
T 1af7_A 108 RVWSAAASTGEEPYSIAITLADALGMAP-------GRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTG 180 (274)
T ss_dssp EEEESCCTTTHHHHHHHHHHHHHHCSCT-------TSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCT
T ss_pred EEEEeeccCChhHHHHHHHHHHhcccCC-------CCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhcccc
Confidence 699999999984 444445433100 1358999999999999999874210 0
Q ss_pred -------CCCCCCCceeEEecccccCCCC-CCCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEE
Q psy890 59 -------KVPVPNPRLRFLEANAEELPIE-SDSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 59 -------~~~~~~~~~~~~~~d~~~~~~~-~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~ 118 (131)
+.+....++.|...|+.+.+++ .++||+|+|.++++++++. .+++.++.+.|+|||++++
T Consensus 181 ~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 181 PHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp TSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0000001688999998876554 4689999999999988754 7899999999999999976
No 115
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.70 E-value=9.2e-17 Score=113.46 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=86.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +..+++++|+| .+++.++++++..++.+ +++++..|+.+++++
T Consensus 65 ~~VLDlGcGtG~ls~~la~~------------g~~~V~gvD~s-~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~ 127 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQA------------GARKVYAVEAT-KMADHARALVKANNLDH----IVEVIEGSVEDISLP 127 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHT------------TCSEEEEEESS-TTHHHHHHHHHHTTCTT----TEEEEESCGGGCCCS
T ss_pred CEEEEeccCcCHHHHHHHhc------------CCCEEEEEccH-HHHHHHHHHHHHcCCCC----eEEEEECchhhcCcC
Confidence 36999999999999988876 24589999999 99999999998877764 799999999988766
Q ss_pred CCCeeEEEEccccccc---cCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNV---TRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|++....+.. ..+..++..+.++|+|||++++.+
T Consensus 128 -~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp -SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred -CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 889999997655544 468889999999999999997643
No 116
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.70 E-value=4.8e-17 Score=115.18 Aligned_cols=112 Identities=13% Similarity=-0.005 Sum_probs=88.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhh-------hccCCCCCCCceeEEecc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR-------DLFKVPVPNPRLRFLEAN 73 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d 73 (131)
.+|||+|||+|..+..++...+ ..+++|+|+++.++..|+++.+ ..+... .+++++.+|
T Consensus 175 d~VLDLGCGtG~l~l~lA~~~g-----------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~---~rVefi~GD 240 (438)
T 3uwp_A 175 DLFVDLGSGVGQVVLQVAAATN-----------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH---AEYTLERGD 240 (438)
T ss_dssp CEEEEESCTTSHHHHHHHHHCC-----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC---CEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC---CCeEEEECc
Confidence 3689999999999999987643 4579999999999999987542 233311 289999999
Q ss_pred cccCCCCC--CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCCCcc
Q psy890 74 AEELPIES--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHVNNS 127 (131)
Q Consensus 74 ~~~~~~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~~~ 127 (131)
+.+.++.. ..||+|+++..+ +.++....|.++.+.|||||+|++.|...+...
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 98876543 479999987665 457888889999999999999999877766543
No 117
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.69 E-value=1.1e-16 Score=111.99 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=82.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++..+ ..+++++|++ .++. +++.+..+..+ +++++..|+. .+.+
T Consensus 187 ~vLDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~~-~~~~--~~~~~~~~~~~----~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 187 TVADVGGGRGGFLLTVLREHP-----------GLQGVLLDRA-EVVA--RHRLDAPDVAG----RWKVVEGDFL-REVP- 246 (348)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TEEEEEEECH-HHHT--TCCCCCGGGTT----SEEEEECCTT-TCCC-
T ss_pred eEEEECCccCHHHHHHHHHCC-----------CCEEEEecCH-HHhh--cccccccCCCC----CeEEEecCCC-CCCC-
Confidence 699999999999999999864 6789999994 4444 33333333332 7999999986 2344
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
+||+|++.+++|++++. .+++.++++.|||||++++.|...+.
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 89999999999999877 69999999999999999999876544
No 118
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=2.4e-16 Score=106.27 Aligned_cols=104 Identities=12% Similarity=0.131 Sum_probs=84.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh---ccCCCCCCCceeEEecccccC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD---LFKVPVPNPRLRFLEANAEEL- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~- 77 (131)
+|||+|||+|.++..++...+ ..+++++|+++.+++.+++++.. .++.+ +++++..|+.+.
T Consensus 39 ~VLDlG~G~G~~~l~la~~~~-----------~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~----~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 39 RIADLGAGAGAAGMAVAARLE-----------KAEVTLYERSQEMAEFARRSLELPDNAAFSA----RIEVLEADVTLRA 103 (260)
T ss_dssp EEEECCSSSSHHHHHHHHHCT-----------TEEEEEEESSHHHHHHHHHHTTSGGGTTTGG----GEEEEECCTTCCH
T ss_pred EEEEeCChHhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHhhhhCCCcc----eEEEEeCCHHHHh
Confidence 689999999999999988753 57899999999999999999887 66553 699999998876
Q ss_pred ------CCCCCCeeEEEEccccccc------------------cCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ------PIESDSYSAYTIAFGIRNV------------------TRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ------~~~~~~~D~i~~~~~l~~~------------------~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.++.++||+|+++...... .....++..+.++|+|||+++++-
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2456789999997333221 246788999999999999998753
No 119
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=2.8e-16 Score=103.22 Aligned_cols=94 Identities=24% Similarity=0.287 Sum_probs=81.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..++. . +++|+|+.+++.++++ ++.++..|+...+++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~--------------~---~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~ 99 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKI--------------K---IGVEPSERMAEIARKR------------GVFVLKGTAENLPLK 99 (219)
T ss_dssp SCEEEETCTTSTTHHHHTC--------------C---EEEESCHHHHHHHHHT------------TCEEEECBTTBCCSC
T ss_pred CcEEEeCCCCCHHHHHHHH--------------H---hccCCCHHHHHHHHhc------------CCEEEEcccccCCCC
Confidence 3699999999998776532 2 9999999999998865 356788888888777
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++..++++++++..++.++.+.|+|||++++.....
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 7899999999999999999999999999999999999976553
No 120
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=2.2e-16 Score=104.75 Aligned_cols=101 Identities=22% Similarity=0.204 Sum_probs=84.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++.+ +++++..|+.+. + .
T Consensus 74 ~vLDiG~G~G~~~~~la~~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 138 (232)
T 3ntv_A 74 NILEIGTAIGYSSMQFASISD-----------DIHVTTIERNETMIQYAKQNLATYHFEN----QVRIIEGNALEQFENV 138 (232)
T ss_dssp EEEEECCSSSHHHHHHHTTCT-----------TCEEEEEECCHHHHHHHHHHHHHTTCTT----TEEEEESCGGGCHHHH
T ss_pred EEEEEeCchhHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEECCHHHHHHhh
Confidence 699999999999999988543 6799999999999999999998877654 899999998764 3 2
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|++.. ...+...++..+.+.|+|||++++-+
T Consensus 139 ~~~~fD~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 139 NDKVYDMIFIDA---AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TTSCEEEEEEET---TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccCCccEEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 357899999764 34567789999999999999998743
No 121
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.69 E-value=3.1e-16 Score=108.98 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=84.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +..+++++|++ .++..++++++..++.+ +++++..|+.+.+++.
T Consensus 41 ~VLDiGcGtG~ls~~la~~------------g~~~v~~vD~s-~~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~ 103 (328)
T 1g6q_1 41 IVLDVGCGTGILSMFAAKH------------GAKHVIGVDMS-SIIEMAKELVELNGFSD----KITLLRGKLEDVHLPF 103 (328)
T ss_dssp EEEEETCTTSHHHHHHHHT------------CCSEEEEEESS-THHHHHHHHHHHTTCTT----TEEEEESCTTTSCCSS
T ss_pred EEEEecCccHHHHHHHHHC------------CCCEEEEEChH-HHHHHHHHHHHHcCCCC----CEEEEECchhhccCCC
Confidence 6999999999999888775 24589999999 69999999988877664 7999999999887777
Q ss_pred CCeeEEEEccc---cccccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAFG---IRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~~---l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
++||+|++... +.+...+..++..+.++|+|||+++
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 88999999754 3444578889999999999999987
No 122
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.69 E-value=1.1e-17 Score=119.25 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=80.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
++|||+|||+|.++..+++. +.+++++|+|+.+++.++++ +... ....+...+...++++
T Consensus 109 ~~VLDiGcG~G~~~~~l~~~-------------g~~v~gvD~s~~~~~~a~~~----~~~~---~~~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 109 PFIVEIGCNDGIMLRTIQEA-------------GVRHLGFEPSSGVAAKAREK----GIRV---RTDFFEKATADDVRRT 168 (416)
T ss_dssp CEEEEETCTTTTTHHHHHHT-------------TCEEEEECCCHHHHHHHHTT----TCCE---ECSCCSHHHHHHHHHH
T ss_pred CEEEEecCCCCHHHHHHHHc-------------CCcEEEECCCHHHHHHHHHc----CCCc---ceeeechhhHhhcccC
Confidence 47999999999999988875 46899999999999999876 1110 0112333444455556
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++.+++++++++..++.+++++|||||++++...
T Consensus 169 ~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 68899999999999999999999999999999999998643
No 123
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.69 E-value=2.6e-17 Score=105.56 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=85.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..++...+ ..+|+++|+|+.|++.++++....+... ++++ .|.... .+
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~p-----------~a~~~A~Di~~~~leiar~~~~~~g~~~----~v~~--~d~~~~-~~ 112 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNENE-----------KIIYHAYDIDRAEIAFLSSIIGKLKTTI----KYRF--LNKESD-VY 112 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSSC-----------CCEEEEECSCHHHHHHHHHHHHHSCCSS----EEEE--ECCHHH-HT
T ss_pred CeEEEecCCCCHHHHHHHhcCC-----------CCEEEEEeCCHHHHHHHHHHHHhcCCCc----cEEE--eccccc-CC
Confidence 3799999999999998877654 6799999999999999999998877543 5555 554433 35
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.++||+|++...+|.+++....+.++.+.|+|||+++-.+
T Consensus 113 ~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 5789999999999999877888889999999999998765
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.69 E-value=3.2e-16 Score=105.01 Aligned_cols=102 Identities=18% Similarity=0.180 Sum_probs=86.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++...+..+ +++++..|+.+. ++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~----------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVG----------PEGRVVSYEIREDFAKLAWENIKWAGFDD----RVTIKLKDIYEG-IE 159 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEECSCHHHHHHHHHHHHHHTCTT----TEEEECSCGGGC-CC
T ss_pred CEEEEecCCchHHHHHHHHHhC----------CCeEEEEEecCHHHHHHHHHHHHHcCCCC----ceEEEECchhhc-cC
Confidence 3699999999999999998854 36799999999999999999998877653 699999998864 56
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++ +.+++..++.++.+.|+|||++++....
T Consensus 160 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp CCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 678999988 3567778899999999999999887643
No 125
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.68 E-value=3.1e-16 Score=106.42 Aligned_cols=101 Identities=16% Similarity=0.120 Sum_probs=85.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-cCCCCCCCceeEEecccccCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
.+|||+|||+|..+..+++.+. +..+++++|+++.+++.+++++... +.. +++++..|+.+ ++
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~-----~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALN----------GKGTLTVVERDEDNLKKAMDNLSEFYDIG-----NVRTSRSDIAD-FI 175 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHT----------TSSEEEEECSCHHHHHHHHHHHHTTSCCT-----TEEEECSCTTT-CC
T ss_pred CEEEEecCCCCHHHHHHHHHcC----------CCCEEEEEECCHHHHHHHHHHHHhcCCCC-----cEEEEECchhc-cC
Confidence 3699999999999999988753 3679999999999999999998776 432 79999999877 55
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
+.++||+|++ +++++..++.++.+.|+|||++++....
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5678999998 4667788999999999999999987654
No 126
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.68 E-value=1.7e-16 Score=103.20 Aligned_cols=102 Identities=10% Similarity=0.003 Sum_probs=84.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++....+.. ++++...|+.+. .
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~--~ 122 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKL------------GAKSVLATDISDESMTAAEENAALNGIY-----DIALQKTSLLAD--V 122 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCC-----CCEEEESSTTTT--C
T ss_pred CEEEEECCCCCHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEecccccc--C
Confidence 36999999999999887764 2568999999999999999998876654 589999998764 3
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|+++..+++ ...++.++.++|+|||++++.++...
T Consensus 123 ~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 123 DGKFDLIVANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp CSCEEEEEEESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred CCCceEEEECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 478999999877654 47789999999999999998765543
No 127
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=6.3e-16 Score=102.06 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=82.1
Q ss_pred Cceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C
Q psy890 1 MYILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 1 ~~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
.+|||+||| +|.++..+++.. ..+++++|+++.+++.++++....+. +++++..|.... +
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF------------NCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKG 118 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH------------CCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTT
T ss_pred CEEEEcCCCHHHHHHHHHHHhc------------CCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhh
Confidence 369999999 999999988874 46899999999999999999887653 688999996543 3
Q ss_pred CCCCCeeEEEEccccccccC-------------------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 IESDSYSAYTIAFGIRNVTR-------------------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~-------------------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
++.++||+|+++...+...+ ...++.++.++|+|||+++++..
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 45688999999866544322 47889999999999999988643
No 128
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=5.1e-16 Score=101.05 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=82.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-CCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 80 (131)
+|||+|||+|..+..++... ..+++++|+|+.+++.++++....+.. +++++..|+.+ .+..
T Consensus 57 ~vLDlgcG~G~~~~~l~~~~------------~~~V~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~D~~~~~~~~ 119 (202)
T 2fpo_A 57 QCLDCFAGSGALGLEALSRY------------AAGATLIEMDRAVSQQLIKNLATLKAG-----NARVVNSNAMSFLAQK 119 (202)
T ss_dssp EEEETTCTTCHHHHHHHHTT------------CSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCHHHHHSSC
T ss_pred eEEEeCCCcCHHHHHHHhcC------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEECCHHHHHhhc
Confidence 69999999999998876651 358999999999999999999877653 89999999876 3455
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHH--hccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYR--VLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~--~L~p~G~l~~~~~~ 122 (131)
.++||+|++...++ .......+..+.+ +|+|||++++....
T Consensus 120 ~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 GTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 57899999976644 4566777888866 59999999876544
No 129
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=3.3e-16 Score=105.58 Aligned_cols=99 Identities=15% Similarity=0.034 Sum_probs=76.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+|+++|+|+.|++.++++..... .+..+...+........
T Consensus 48 ~VLDlGcGtG~~a~~La~~-------------g~~V~gvD~S~~ml~~Ar~~~~~~~------v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 48 TVAVIGASTRFLIEKALER-------------GASVTVFDFSQRMCDDLAEALADRC------VTIDLLDITAEIPKELA 108 (261)
T ss_dssp EEEEECTTCHHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHTSSSC------CEEEECCTTSCCCGGGT
T ss_pred EEEEEeCcchHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHHHhcc------ceeeeeecccccccccC
Confidence 6999999999999999875 5689999999999999999876531 03344333331011124
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|+++.+++++. +....+.++.++| |||++++..
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 6899999999998875 5677899999999 999998753
No 130
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.68 E-value=1.5e-16 Score=101.14 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=82.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~ 80 (131)
+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...+..+ ++.++..|+.+. +..
T Consensus 34 ~vLDlGcG~G~~~~~l~~~-~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAVSR-G-----------MSAAVLVEKNRKAQAIIQDNIIMTKAEN----RFTLLKMEAERAIDCL 97 (177)
T ss_dssp EEEEETCTTCHHHHHHHHT-T-----------CCEEEEECCCHHHHHHHHHHHHTTTCGG----GEEEECSCHHHHHHHB
T ss_pred eEEEeCCCCCHHHHHHHHc-C-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----ceEEEECcHHHhHHhh
Confidence 6899999999999988875 2 4689999999999999999998776543 799999998763 333
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHH--HhccCCcEEEEEeccCC
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAY--RVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~L~p~G~l~~~~~~~~ 124 (131)
.++||+|++...++ .......+..+. ++|+|||++++......
T Consensus 98 ~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 TGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 46799999976543 234456667776 89999999988655543
No 131
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.68 E-value=5.7e-16 Score=103.72 Aligned_cols=101 Identities=20% Similarity=0.180 Sum_probs=86.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-cCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-FKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++... + . .++.+...|+.+.+++
T Consensus 99 ~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~~D~~~~~~~~a~~~~~~~~g-~----~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 99 RVLEAGTGSGGLTLFLARAVG----------EKGLVESYEARPHHLAQAERNVRAFWQ-V----ENVRFHLGKLEEAELE 163 (258)
T ss_dssp EEEEECCTTSHHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHHHHCC-C----CCEEEEESCGGGCCCC
T ss_pred EEEEECCCcCHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHhcC-C----CCEEEEECchhhcCCC
Confidence 699999999999999998864 3679999999999999999998776 4 2 2899999999887677
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++ +.++...++.++.+.|+|||++++....
T Consensus 164 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 164 EAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp TTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 788999998 3567778899999999999999987654
No 132
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=8.4e-16 Score=100.49 Aligned_cols=101 Identities=16% Similarity=-0.003 Sum_probs=82.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++..+ +..+++++|+++.+++.++++....+.. ++.+...|.......
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVG----------EDGLVVSIERIPELAEKAERTLRKLGYD-----NVIVIVGDGTLGYEP 143 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEESCGGGCCGG
T ss_pred CEEEEECCCccHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEECCcccCCCC
Confidence 3699999999999999988863 2478999999999999999998776543 689999987543222
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++..++++++ .++.+.|+|||++++....
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 56899999999998876 4788999999999887543
No 133
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.67 E-value=2.8e-16 Score=102.57 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=83.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~ 80 (131)
+|||+|||+|..+..+++..+ ...+++++|+++.+++.+++++...+..+ +++++..|..+. +..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 124 (210)
T 3c3p_A 59 LVVVPGDGLGCASWWFARAIS----------ISSRVVMIDPDRDNVEHARRMLHDNGLID----RVELQVGDPLGIAAGQ 124 (210)
T ss_dssp EEEEESCGGGHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHSGGG----GEEEEESCHHHHHTTC
T ss_pred EEEEEcCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHCCCCc----eEEEEEecHHHHhccC
Confidence 699999999999999988754 25799999999999999999988766543 799999997654 433
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+ ||+|++... ..+...++.++.++|+|||++++.+
T Consensus 125 ~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 125 RD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp CS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 45 999998742 4577889999999999999998744
No 134
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.67 E-value=4.5e-18 Score=113.17 Aligned_cols=99 Identities=10% Similarity=0.025 Sum_probs=80.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..+++. +.+++++|+|+.+++.+++++...+..+ ++.++..|+.+.+ .
T Consensus 80 ~~vLD~gcG~G~~~~~la~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~-~ 141 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT-------------GMRVIAIDIDPVKIALARNNAEVYGIAD----KIEFICGDFLLLA-S 141 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHTTCGG----GEEEEESCHHHHG-G
T ss_pred CEEEECccccCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCCCc----CeEEEECChHHhc-c
Confidence 36999999999999999875 5789999999999999999998776543 7999999988765 4
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
.++||+|+++..+++..+....+.++.++|+|||+++
T Consensus 142 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHH
T ss_pred cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeH
Confidence 5789999999888877655445556666666666643
No 135
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.67 E-value=2.3e-16 Score=100.91 Aligned_cols=105 Identities=12% Similarity=0.042 Sum_probs=83.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|||+|||+|..+..++.. ...+++++|+++.+++.++++....+..+ +++++..|+.+..
T Consensus 47 ~vLD~GcG~G~~~~~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 47 MALDLYSGSGGLAIEAVSR------------GMDKSICIEKNFAALKVIKENIAITKEPE----KFEVRKMDANRALEQF 110 (187)
T ss_dssp EEEETTCTTCHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHHTCGG----GEEEEESCHHHHHHHH
T ss_pred CEEEeCCccCHHHHHHHHc------------CCCEEEEEECCHHHHHHHHHHHHHhCCCc----ceEEEECcHHHHHHHH
Confidence 6899999999999987764 24689999999999999999988766543 7999999977632
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHH--HHhccCCcEEEEEeccC
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEA--YRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~--~~~L~p~G~l~~~~~~~ 123 (131)
...++||+|++....+ .......+..+ .++|+|||++++.....
T Consensus 111 ~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2257899999987644 44566667777 88899999998865444
No 136
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.67 E-value=1.1e-15 Score=107.06 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=88.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|+|+|||+|..+..+++..+ ..++++.|. +.+++.++++..... . .+++++..|+.+.+.+
T Consensus 182 ~v~DvGgG~G~~~~~l~~~~p-----------~~~~~~~dl-p~v~~~a~~~~~~~~-~----~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 182 LMCDLGGGAGALAKECMSLYP-----------GCKITVFDI-PEVVWTAKQHFSFQE-E----EQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp EEEEETCTTSHHHHHHHHHCS-----------SCEEEEEEC-HHHHHHHHHHSCC---C----CSEEEEESCTTTSCCC-
T ss_pred eEEeeCCCCCHHHHHHHHhCC-----------CceeEeccC-HHHHHHHHHhhhhcc-c----CceeeecCccccCCCC-
Confidence 589999999999999999875 778999997 789999988876544 2 2899999998765443
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.+|+|++.+++|++++. .++|+++++.|+|||+++++|...++
T Consensus 244 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 244 -EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp -CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred -CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 57999999999999865 57899999999999999999976544
No 137
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=5.1e-16 Score=117.42 Aligned_cols=109 Identities=9% Similarity=0.026 Sum_probs=87.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCC-CCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKV-PVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~ 80 (131)
+|||+|||+|.++..+++..+ +..+++++|+|+.+++.|++++...... ...-.+++++.+|+.++++.
T Consensus 724 rVLDVGCGTG~lai~LAr~g~----------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~ 793 (950)
T 3htx_A 724 TLVDFGCGSGSLLDSLLDYPT----------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR 793 (950)
T ss_dssp EEEEETCSSSHHHHHHTSSCC----------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT
T ss_pred EEEEECCCCCHHHHHHHHhCC----------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc
Confidence 699999999999998887642 2469999999999999999876532110 00002799999999998888
Q ss_pred CCCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++..+++++++.. .++.++.+.|+|| .+++...
T Consensus 794 d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 794 LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 88999999999999998755 6899999999999 6666543
No 138
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.67 E-value=2.4e-16 Score=105.47 Aligned_cols=107 Identities=13% Similarity=0.016 Sum_probs=81.7
Q ss_pred ceeeeecccchhhHHHhhh--hcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc---cCCCCCCCc----------
Q psy890 2 YILFYLVFPGDIAFRFLNY--VDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL---FKVPVPNPR---------- 66 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~~~~~~~---------- 66 (131)
+|||+|||+|.++..+++. .+ ..+++++|+|+.+++.++++.... +... +
T Consensus 54 ~vLD~gcGsG~~~~~la~~~~~~-----------~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~----~~~~~~~~~~~ 118 (250)
T 1o9g_A 54 TLWDPCCGSGYLLTVLGLLHRRS-----------LRQVIASDVDPAPLELAAKNLALLSPAGLTA----RELERREQSER 118 (250)
T ss_dssp EEEETTCTTSHHHHHHHHHTGGG-----------EEEEEEEESCHHHHHHHHHHHHTTSHHHHHH----HHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHhccC-----------CCeEEEEECCHHHHHHHHHHHHHhhhccccc----cchhhhhhhhh
Confidence 6899999999999998887 32 568999999999999999877654 2210 1
Q ss_pred ---------------ee-------------EEecccccCCC-----CCCCeeEEEEcccccccc---------CHHHHHH
Q psy890 67 ---------------LR-------------FLEANAEELPI-----ESDSYSAYTIAFGIRNVT---------RIDKALS 104 (131)
Q Consensus 67 ---------------~~-------------~~~~d~~~~~~-----~~~~~D~i~~~~~l~~~~---------~~~~~l~ 104 (131)
++ +...|+.+... ...+||+|+++..+.... ....++.
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 55 88888776321 334899999986654433 2458899
Q ss_pred HHHHhccCCcEEEEEeccC
Q psy890 105 EAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 105 ~~~~~L~p~G~l~~~~~~~ 123 (131)
++.++|+|||+++++..+.
T Consensus 199 ~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHSCTTCEEEEEESSS
T ss_pred HHHHhcCCCcEEEEeCcch
Confidence 9999999999999865544
No 139
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=1.6e-16 Score=104.92 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=75.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc-ccCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA-EELPI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~ 79 (131)
.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++. ++++++..|+ ..+++
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~-------------~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~ 106 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQ-------------AARWAAYDFSPELLKLARANA----------PHADVYEWNGKGELPA 106 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGG-------------SSEEEEEESCHHHHHHHHHHC----------TTSEEEECCSCSSCCT
T ss_pred CeEEEeCCCCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhC----------CCceEEEcchhhccCC
Confidence 36999999999999988886 468999999999999998881 2789999998 55677
Q ss_pred C-CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 80 E-SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 80 ~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
+ .++||+|++. .++...+.++.+.|||||+++
T Consensus 107 ~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 107 GLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp TCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred cCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEE
Confidence 7 7899999987 466778899999999999998
No 140
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.67 E-value=1.3e-16 Score=104.69 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=78.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHH----hhhccCCCCCCCceeEEecccccC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR----ARDLFKVPVPNPRLRFLEANAEEL 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~ 77 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.+.+. ....+.. ++.++..|+.++
T Consensus 30 ~vLDiGcG~G~~~~~la~~~p-----------~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~l 93 (218)
T 3mq2_A 30 VVLDVGTGDGKHPYKVARQNP-----------SRLVVALDADKSRMEKISAKAAAKPAKGGLP-----NLLYLWATAERL 93 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHCT-----------TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-----TEEEEECCSTTC
T ss_pred EEEEecCCCCHHHHHHHHHCC-----------CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-----ceEEEecchhhC
Confidence 689999999999999988753 67999999999988864332 2233332 799999999998
Q ss_pred CCCCCCeeEEEEcccc-----ccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 78 PIESDSYSAYTIAFGI-----RNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l-----~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++..++ |.|.....+ +++++...++.++.+.|||||++++.
T Consensus 94 ~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 94 PPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 876665 777643322 25567789999999999999999884
No 141
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.67 E-value=7.5e-16 Score=102.06 Aligned_cols=99 Identities=11% Similarity=0.018 Sum_probs=78.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~ 78 (131)
+|||+|||+|.++..+++..+ +..+++++|+|+.+++.+.++.+... ++.++..|+.+. +
T Consensus 80 ~vLDlG~G~G~~~~~la~~~g----------~~~~v~gvD~s~~~i~~~~~~a~~~~-------~v~~~~~d~~~~~~~~ 142 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIVG----------PDGLVYAVEFSHRSGRDLINLAKKRT-------NIIPVIEDARHPHKYR 142 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHHC----------TTCEEEEECCCHHHHHHHHHHHHHCT-------TEEEECSCTTCGGGGG
T ss_pred EEEEEcccCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHhhccC-------CeEEEEcccCChhhhc
Confidence 689999999999999998863 25789999999998888877766542 899999998773 3
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
...++||+|++... .......++.++.+.|+|||++++.
T Consensus 143 ~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 143 MLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp GGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 44678999999654 2222345588899999999999884
No 142
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.66 E-value=3.7e-16 Score=102.85 Aligned_cols=104 Identities=12% Similarity=0.072 Sum_probs=85.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ +..+++++|+++.+++.+++++...++.+ +++++..|..+. + .
T Consensus 67 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 67 KVIDIGTFTGYSAIAMGLALP----------KDGTLITCDVDEKSTALAKEYWEKAGLSD----KIGLRLSPAKDTLAEL 132 (225)
T ss_dssp EEEEECCTTSHHHHHHHTTCC----------TTCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEESCHHHHHHHH
T ss_pred EEEEeCCcchHHHHHHHHhCC----------CCCEEEEEeCCHHHHHHHHHHHHHCCCCC----ceEEEeCCHHHHHHHh
Confidence 699999999999999988764 36799999999999999999998877654 799999997553 2 1
Q ss_pred CC----CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 ES----DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~~----~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.. ++||+|++... ..+...++.++.++|+|||++++.+..
T Consensus 133 ~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11 68999997543 446778899999999999999886544
No 143
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.66 E-value=7.9e-16 Score=104.35 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=86.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-c-CCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-F-KVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|.++..+++.+. +..+++++|+++.+++.+++++... + +.+ ++.+...|+.+.++
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~----~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVG----------PAGQVISYEQRADHAEHARRNVSGCYGQPPD----NWRLVVSDLADSEL 167 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHC----------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCT----TEEEECSCGGGCCC
T ss_pred EEEEEcccccHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCC----cEEEEECchHhcCC
Confidence 699999999999999998764 3679999999999999999998765 3 222 89999999988777
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
+.++||+|++ +.+++..++.++.+.|+|||++++....
T Consensus 168 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 168 PDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6778999998 3456778899999999999999987644
No 144
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.66 E-value=6.6e-16 Score=105.08 Aligned_cols=101 Identities=9% Similarity=0.077 Sum_probs=85.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++....+..+ +++++..|+.+... .
T Consensus 128 ~VLDlgcG~G~~~~~la~~~------------~~~V~~vD~s~~~~~~a~~n~~~n~~~~----~v~~~~~D~~~~~~-~ 190 (278)
T 2frn_A 128 LVVDMFAGIGHLSLPIAVYG------------KAKVIAIEKDPYTFKFLVENIHLNKVED----RMSAYNMDNRDFPG-E 190 (278)
T ss_dssp EEEETTCTTTTTHHHHHHHT------------CCEEEEECCCHHHHHHHHHHHHHTTCTT----TEEEECSCTTTCCC-C
T ss_pred EEEEecccCCHHHHHHHHhC------------CCEEEEEECCHHHHHHHHHHHHHcCCCc----eEEEEECCHHHhcc-c
Confidence 68999999999999998873 2379999999999999999998877653 69999999988765 6
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++... .....++.++.+.|+|||++++.+++.
T Consensus 191 ~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 78999998543 244677889999999999999987764
No 145
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.66 E-value=9.3e-16 Score=106.05 Aligned_cols=100 Identities=18% Similarity=0.136 Sum_probs=83.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
++|||+|||+|..+..+++... ...+++++|+|+++++.+++++...+.. ++.+...|..+....
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~g~~-----~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVG----------EKGLVVSVEYSRKICEIAKRNVERLGIE-----NVIFVCGDGYYGVPE 141 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTCEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCCGG
T ss_pred CEEEEecCCchHHHHHHHHhcC----------CCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEECChhhcccc
Confidence 3699999999999999988753 2367999999999999999998876654 699999998875444
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++..+++++. .++.+.|||||++++...
T Consensus 142 ~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred CCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 57899999999998876 567889999999988643
No 146
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.66 E-value=1.3e-15 Score=100.54 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=80.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+ ++.++..|..+.....
T Consensus 73 ~vLdiG~G~G~~~~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 73 KVLEIGTGIGYYTALIAEI-------------VDKVVSVEINEKMYNYASKLLSYYN-------NIKLILGDGTLGYEEE 132 (231)
T ss_dssp EEEEECCTTSHHHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHTTCS-------SEEEEESCGGGCCGGG
T ss_pred EEEEEcCCCCHHHHHHHHH-------------cCEEEEEeCCHHHHHHHHHHHhhcC-------CeEEEECCcccccccC
Confidence 6999999999999998886 3689999999999999999987654 6889999987632245
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..+++++. .++.+.|+|||++++.....
T Consensus 133 ~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 7899999999998876 36889999999999876543
No 147
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.66 E-value=6.4e-16 Score=102.36 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=85.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~ 80 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...+..+ ++.++..|..+. +..
T Consensus 57 ~vLdiG~G~G~~~~~la~~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 121 (233)
T 2gpy_A 57 RILEIGTAIGYSAIRMAQALP-----------EATIVSIERDERRYEEAHKHVKALGLES----RIELLFGDALQLGEKL 121 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHCT-----------TCEEEEECCCHHHHHHHHHHHHHTTCTT----TEEEECSCGGGSHHHH
T ss_pred EEEEecCCCcHHHHHHHHHCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEECCHHHHHHhc
Confidence 699999999999999988864 5799999999999999999998776653 799999998764 322
Q ss_pred --CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 --SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 --~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.++||+|++.... .+...++..+.+.|+|||++++.+.
T Consensus 122 ~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 122 ELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp TTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ccCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4689999997664 3778899999999999999988643
No 148
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.66 E-value=7e-16 Score=101.46 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=84.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ ...+++++|+++.+++.+++++...++.+ +++++..|..+. + +
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 61 NILEIGTLGGYSTIWLARGLS----------SGGRVVTLEASEKHADIARSNIERANLND----RVEVRTGLALDSLQQI 126 (223)
T ss_dssp EEEEECCTTSHHHHHHHTTCC----------SSCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEESCHHHHHHHH
T ss_pred EEEEecCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEEcCHHHHHHHH
Confidence 699999999999999988764 35799999999999999999998877653 799999997653 1 1
Q ss_pred C---CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 80 E---SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 80 ~---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
. .++||+|++... .+.....+.++.+.|+|||++++.+..
T Consensus 127 ~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 127 ENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 1 257999998654 345678899999999999988875443
No 149
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=1.4e-15 Score=96.71 Aligned_cols=96 Identities=10% Similarity=0.084 Sum_probs=82.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++ . ..+++++|+++.+++.++++....+.. +++++..|+.+ +++.
T Consensus 38 ~vLdiG~G~G~~~~~l~~--~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAK--R-----------CKFVYAIDYLDGAIEVTKQNLAKFNIK-----NCQIIKGRAED-VLDK 98 (183)
T ss_dssp EEEEESCCCSHHHHHHHT--T-----------SSEEEEEECSHHHHHHHHHHHHHTTCC-----SEEEEESCHHH-HGGG
T ss_pred EEEEeCCCCCHHHHHHHh--c-----------CCeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEECCccc-cccC
Confidence 699999999999998887 2 679999999999999999998877653 79999999877 5555
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++... .+....+.++.+. |||++++....
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 78999999887 6778889999888 99999987654
No 150
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.66 E-value=1.6e-15 Score=99.94 Aligned_cols=103 Identities=19% Similarity=0.158 Sum_probs=82.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC----CCCCCCceeEEeccccc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK----VPVPNPRLRFLEANAEE 76 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~ 76 (131)
.+|||+|||+|..+..+++..+ ...+++++|+++.+++.++++....+. .+ ++.+...|...
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~----~v~~~~~d~~~ 144 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVG----------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSG----RVQLVVGDGRM 144 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC----------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTS----SEEEEESCGGG
T ss_pred CEEEEEcCCcCHHHHHHHHHhC----------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCC----cEEEEECCccc
Confidence 3699999999999999988764 246899999999999999998876432 11 78999999876
Q ss_pred CCCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 77 LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 77 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
......+||+|++...++++. .++.+.|+|||++++...+.
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 544457899999988876553 57889999999998876543
No 151
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.66 E-value=5.6e-16 Score=108.23 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=84.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.+++++...+. ..+++..|..+.. .
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~-----------~~~v~~vD~s~~~l~~a~~~~~~~~~------~~~~~~~d~~~~~--~ 259 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSP-----------KIRLTLCDVSAPAVEASRATLAANGV------EGEVFASNVFSEV--K 259 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCT-----------TCBCEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTTTTC--C
T ss_pred eEEEecCccCHHHHHHHHHCC-----------CCEEEEEECCHHHHHHHHHHHHHhCC------CCEEEEccccccc--c
Confidence 689999999999999988743 56899999999999999999877553 4567778876543 5
Q ss_pred CCeeEEEEcccccc-----ccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRN-----VTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~-----~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|+++..+|+ ..+...++.++.++|+|||.++++...
T Consensus 260 ~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 260 GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 68999999988875 345788999999999999999987644
No 152
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.65 E-value=7.2e-17 Score=107.84 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=86.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-IE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 80 (131)
+|||+|||+|..+..+++.++ ...+++++|+++.+++.++++++..+..+ +++++.+|+.+.. ..
T Consensus 63 ~VLDiG~G~G~~t~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~----~i~~~~gda~~~l~~~ 128 (242)
T 3r3h_A 63 KVLELGTFTGYSALAMSLALP----------DDGQVITCDINEGWTKHAHPYWREAKQEH----KIKLRLGPALDTLHSL 128 (242)
T ss_dssp EEEEEESCCSHHHHHHHHTSC----------TTCEEEEEECCCSSCCCSHHHHHHTTCTT----TEEEEESCHHHHHHHH
T ss_pred EEEEeeCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEEcCHHHHHHHH
Confidence 699999999999999998764 36799999999999999999998877664 8999999976642 11
Q ss_pred -----CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 -----SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 -----~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++... ..+...++.++.++|+|||++++-+..
T Consensus 129 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 478999998654 456678899999999999999885544
No 153
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=3.6e-17 Score=106.54 Aligned_cols=104 Identities=17% Similarity=0.076 Sum_probs=65.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.+++++...+. +++++..|+.+ +++.
T Consensus 33 ~vLDiG~G~G~~~~~l~~~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~-~~~~ 94 (215)
T 4dzr_A 33 RVIDVGTGSGCIAVSIALACP-----------GVSVTAVDLSMDALAVARRNAERFGA------VVDWAAADGIE-WLIE 94 (215)
T ss_dssp EEEEEESSBCHHHHHHHHHCT-----------TEEEEEEECC-------------------------CCHHHHHH-HHHH
T ss_pred EEEEecCCHhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHHhCC------ceEEEEcchHh-hhhh
Confidence 689999999999999998753 57999999999999999998876542 57788888766 4343
Q ss_pred -----CCeeEEEEccccccccC--------------------------HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 -----DSYSAYTIAFGIRNVTR--------------------------IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 -----~~~D~i~~~~~l~~~~~--------------------------~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|+++...+.... ...++.++.++|+|||++++.++..
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 78999999655433221 1678889999999999966666543
No 154
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.65 E-value=1.4e-15 Score=107.38 Aligned_cols=106 Identities=16% Similarity=0.097 Sum_probs=84.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+|+.+++.++++....+..+. .+++++..|..+ +++.
T Consensus 225 ~VLDlGcG~G~~s~~la~~~p-----------~~~V~gvD~s~~al~~Ar~n~~~ngl~~~--~~v~~~~~D~~~-~~~~ 290 (375)
T 4dcm_A 225 EIVDLGCGNGVIGLTLLDKNP-----------QAKVVFVDESPMAVASSRLNVETNMPEAL--DRCEFMINNALS-GVEP 290 (375)
T ss_dssp EEEEETCTTCHHHHHHHHHCT-----------TCEEEEEESCHHHHHHHHHHHHHHCGGGG--GGEEEEECSTTT-TCCT
T ss_pred eEEEEeCcchHHHHHHHHHCC-----------CCEEEEEECcHHHHHHHHHHHHHcCCCcC--ceEEEEechhhc-cCCC
Confidence 699999999999999998853 67999999999999999999887654310 147889999876 4566
Q ss_pred CCeeEEEEcccccccc-----CHHHHHHHHHHhccCCcEEEEEec
Q psy890 82 DSYSAYTIAFGIRNVT-----RIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~-----~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
++||+|+++..+++.. ....++.++.+.|+|||+++++..
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 7899999998887532 234789999999999999998653
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.65 E-value=1e-15 Score=103.84 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=82.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..++...+ ..+++++|+|+.+++.++++....+.. ++.++..|+.+. ++.
T Consensus 112 ~vLDlG~GsG~~~~~la~~~~-----------~~~v~~vD~s~~~l~~a~~n~~~~~~~-----~v~~~~~d~~~~-~~~ 174 (276)
T 2b3t_A 112 RILDLGTGTGAIALALASERP-----------DCEIIAVDRMPDAVSLAQRNAQHLAIK-----NIHILQSDWFSA-LAG 174 (276)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEEECCSTTGG-GTT
T ss_pred EEEEecCCccHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEcchhhh-ccc
Confidence 699999999999999988754 679999999999999999998876654 799999998763 335
Q ss_pred CCeeEEEEccccccc-------------------------cCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFGIRNV-------------------------TRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~-------------------------~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++||+|+++...... .....++.++.++|+|||++++.
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 689999997433221 23467889999999999999874
No 156
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=1.1e-15 Score=97.72 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=83.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+..+ ++.+...|+.+ +++
T Consensus 35 ~~vldiG~G~G~~~~~l~~~-------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~-~~~ 96 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGR-------------VRRVYAIDRNPEAISTTEMNLQRHGLGD----NVTLMEGDAPE-ALC 96 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHTTCCT----TEEEEESCHHH-HHT
T ss_pred CEEEEECCCCCHHHHHHHHh-------------cCEEEEEECCHHHHHHHHHHHHHcCCCc----ceEEEecCHHH-hcc
Confidence 36999999999999988775 3689999999999999999988776533 78999998766 222
Q ss_pred C-CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 S-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
. ++||+|++...++ +....+.++.+.|+|||++++....
T Consensus 97 ~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp TSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred cCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2 5899999987654 5688899999999999999987654
No 157
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.65 E-value=3.6e-16 Score=110.15 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=83.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++. ++++++..|+.+ +++.
T Consensus 212 ~vLDvG~G~G~~~~~l~~~~~-----------~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 212 TLVDVGGGSGRNLELIISKYP-----------LIKGINFDL-PQVIENAPPL-----------SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-CCCC
T ss_pred EEEEeCCCCcHHHHHHHHHCC-----------CCeEEEeCh-HHHHHhhhhc-----------CCCEEEeCCccc-CCCC
Confidence 699999999999999998864 678999999 8888766531 179999999877 5543
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
||+|++.+++|++++.. .++.++++.|+|||++++.|...+.
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPE 311 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECS
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99999999999999877 9999999999999999998876544
No 158
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.65 E-value=6.3e-16 Score=108.91 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=82.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++. ++++++..|+.+ +++.
T Consensus 206 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 206 TIVDVGGGTGAVASMIVAKYP-----------SINAINFDL-PHVIQDAPAF-----------SGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-CCCC
T ss_pred EEEEeCCCcCHHHHHHHHhCC-----------CCEEEEEeh-HHHHHhhhhc-----------CCCEEEecCCCC-CCCC
Confidence 699999999999999999875 678999999 7777665421 289999999876 5554
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
. |+|++.+++|++++. .++|+++++.|+|||++++.|...+.
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 3 999999999999764 48899999999999999999877554
No 159
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.65 E-value=2.4e-16 Score=104.31 Aligned_cols=101 Identities=16% Similarity=0.110 Sum_probs=77.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC-HHHHHHH---HHHhhhccCCCCCCCceeEEecccccC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVG---EQRARDLFKVPVPNPRLRFLEANAEEL 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~ 77 (131)
+|||+|||+|..+..+++..+ ..+++|+|+| +.|++.| +++....++. ++.+...|...+
T Consensus 27 ~vLDiGCG~G~~~~~la~~~~-----------~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-----~v~~~~~d~~~l 90 (225)
T 3p2e_A 27 VHIDLGTGDGRNIYKLAINDQ-----------NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-----NVVFVIAAAESL 90 (225)
T ss_dssp EEEEETCTTSHHHHHHHHTCT-----------TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-----SEEEECCBTTBC
T ss_pred EEEEEeccCcHHHHHHHHhCC-----------CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-----CeEEEEcCHHHh
Confidence 689999999999998886532 6789999999 7777666 7666655543 799999999887
Q ss_pred CCC-CCCeeEEEEccccccc-----cCHHHHHHHHHHhccCCcEEEE
Q psy890 78 PIE-SDSYSAYTIAFGIRNV-----TRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 78 ~~~-~~~~D~i~~~~~l~~~-----~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
+.. .+.+|.|.+++.+... .+....+.+++++|||||++++
T Consensus 91 ~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 91 PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 532 2567777776543321 2345789999999999999988
No 160
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.65 E-value=4.6e-16 Score=108.90 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=83.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ .. +++++..|+.+ +++
T Consensus 191 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~----~~-------~v~~~~~d~~~-~~p- 245 (352)
T 1fp2_A 191 SIVDVGGGTGTTAKIICETFP-----------KLKCIVFDR-PQVVENLSG----SN-------NLTYVGGDMFT-SIP- 245 (352)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHTTCCC----BT-------TEEEEECCTTT-CCC-
T ss_pred eEEEeCCCccHHHHHHHHHCC-----------CCeEEEeeC-HHHHhhccc----CC-------CcEEEeccccC-CCC-
Confidence 699999999999999998864 678999999 888877653 11 69999999866 444
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccC---CcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKP---GGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p---~G~l~~~~~~~~~ 125 (131)
.||+|++.+++|++++.. .+++++++.|+| ||++++.+...+.
T Consensus 246 -~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 246 -NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred -CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 399999999999998877 999999999999 9999999876543
No 161
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.64 E-value=1.7e-15 Score=102.18 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=80.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ +.+++++|+|+.+++.++++.. ++.+...|...+++..
T Consensus 88 ~vLdiG~G~G~~~~~l~~~~~-----------~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~ 146 (269)
T 1p91_A 88 AVLDIGCGEGYYTHAFADALP-----------EITTFGLDVSKVAIKAAAKRYP----------QVTFCVASSHRLPFSD 146 (269)
T ss_dssp EEEEETCTTSTTHHHHHHTCT-----------TSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTSCSBCT
T ss_pred EEEEECCCCCHHHHHHHHhCC-----------CCeEEEEeCCHHHHHHHHHhCC----------CcEEEEcchhhCCCCC
Confidence 699999999999999988753 5689999999999999987641 6889999998888777
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|++.+... .+.++.++|+|||++++......
T Consensus 147 ~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 147 TSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp TCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred CceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 8999999876532 47889999999999999876543
No 162
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.64 E-value=2.3e-15 Score=100.59 Aligned_cols=102 Identities=22% Similarity=0.155 Sum_probs=80.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--------cCCCCCCCceeEEecc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--------FKVPVPNPRLRFLEAN 73 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~d 73 (131)
.|||+|||+|.++..+++..+ ..+++++|+|+.+++.+++++... +.. ++.++..|
T Consensus 52 ~vLDiGcG~G~~~~~la~~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-----nv~~~~~D 115 (246)
T 2vdv_E 52 TIADIGCGFGGLMIDLSPAFP-----------EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-----NINVLRGN 115 (246)
T ss_dssp EEEEETCTTSHHHHHHHHHST-----------TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-----TEEEEECC
T ss_pred EEEEEcCCCCHHHHHHHHhCC-----------CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-----cEEEEecc
Confidence 589999999999999988753 568999999999999999887654 332 79999999
Q ss_pred ccc-CC--CCCCCeeEEEEccccccccCH--------HHHHHHHHHhccCCcEEEEE
Q psy890 74 AEE-LP--IESDSYSAYTIAFGIRNVTRI--------DKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 74 ~~~-~~--~~~~~~D~i~~~~~l~~~~~~--------~~~l~~~~~~L~p~G~l~~~ 119 (131)
+.+ ++ +...++|.|+..+.-.+.... ..++.++.++|+|||++++.
T Consensus 116 ~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 116 AMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 876 44 567789999865432222111 47899999999999999885
No 163
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.64 E-value=1.1e-15 Score=109.27 Aligned_cols=109 Identities=8% Similarity=-0.053 Sum_probs=83.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHH-------HHHhhhccCCCCCCCceeEEecc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVG-------EQRARDLFKVPVPNPRLRFLEAN 73 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~d 73 (131)
.+|||+|||+|..+..+++..+ ..+++|+|+++.+++.| ++++...++.. .+++++.+|
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g-----------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~---~nV~~i~gD 309 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECG-----------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL---NNVEFSLKK 309 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHC-----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC---CCEEEEESS
T ss_pred CEEEEeCCCcCHHHHHHHHHCC-----------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC---CceEEEEcC
Confidence 3699999999999999998764 56899999999999988 77777655321 178888765
Q ss_pred cccC--CC--CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 74 AEEL--PI--ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 74 ~~~~--~~--~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.... ++ ..++||+|+++..+ +.++....+.++.+.|||||++++.+.-.+
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred ccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 3321 12 23679999987665 346788889999999999999998754433
No 164
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.64 E-value=2e-15 Score=105.65 Aligned_cols=100 Identities=15% Similarity=0.096 Sum_probs=83.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +..+++++|+|+ ++..++++++..++.+ +++++..|+.+.+.+
T Consensus 52 ~~VLDiGcGtG~ls~~la~~------------g~~~V~~vD~s~-~~~~a~~~~~~~~l~~----~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQA------------GARKIYAVEAST-MAQHAEVLVKSNNLTD----RIVVIPGKVEEVSLP 114 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHT------------TCSEEEEEECST-HHHHHHHHHHHTTCTT----TEEEEESCTTTCCCS
T ss_pred CEEEEcCCCccHHHHHHHhC------------CCCEEEEECCHH-HHHHHHHHHHHcCCCC----cEEEEEcchhhCCCC
Confidence 36999999999999988775 256899999996 8899999888777654 899999999887654
Q ss_pred CCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEE
Q psy890 81 SDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~ 118 (131)
++||+|++....+++. .....+.++.+.|+|||++++
T Consensus 115 -~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 115 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp -SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred -CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 5799999987766553 566788899999999999974
No 165
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.64 E-value=1.7e-15 Score=102.81 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=85.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++.+. +..+++++|+++.+++.++++....+..+ ++++...|+.+. ++.
T Consensus 115 ~VLDiG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~-~~~ 179 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAVG----------SSGKVFAYEKREEFAKLAESNLTKWGLIE----RVTIKVRDISEG-FDE 179 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHTT----------TTCEEEEECCCHHHHHHHHHHHHHTTCGG----GEEEECCCGGGC-CSC
T ss_pred EEEEECCcCCHHHHHHHHHhC----------CCcEEEEEECCHHHHHHHHHHHHHcCCCC----CEEEEECCHHHc-ccC
Confidence 699999999999999988753 36799999999999999999988766533 799999998775 556
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++. .+++..++.++.+.|+|||++++....
T Consensus 180 ~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 180 KDVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp CSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred CccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 789999983 466778899999999999999987653
No 166
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.64 E-value=8.7e-16 Score=108.06 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=82.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.++..+++. ++++++..|+.+ +++.
T Consensus 204 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 204 TLVDVGGGVGATVAAIAAHYP-----------TIKGVNFDL-PHVISEAPQF-----------PGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTT-CCCC
T ss_pred EEEEeCCCCCHHHHHHHHHCC-----------CCeEEEecC-HHHHHhhhhc-----------CCeEEEeCCcCC-CCCC
Confidence 699999999999999999875 678999999 7776655421 289999999887 6654
Q ss_pred CCeeEEEEccccccccC--HHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTR--IDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
. |+|++.+++|++++ ..++|+++++.|+|||++++.|...+.
T Consensus 260 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 260 G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 3 99999999999864 468899999999999999999877554
No 167
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.64 E-value=8e-16 Score=103.05 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=84.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ +..+++++|+++.+++.++++++..++.+ +++++.+|..+. + +
T Consensus 82 ~VLeiG~G~G~~~~~la~~~~----------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~----~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 82 NTMEIGVYTGYSLLATALAIP----------EDGKILAMDINKENYELGLPVIKKAGVDH----KIDFREGPALPVLDEM 147 (247)
T ss_dssp EEEEECCGGGHHHHHHHHHSC----------TTCEEEEEESCCHHHHHHHHHHHHTTCGG----GEEEEESCHHHHHHHH
T ss_pred EEEEeCCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----CeEEEECCHHHHHHHH
Confidence 699999999999999999864 36799999999999999999998876643 799999997653 2 2
Q ss_pred -----CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 -----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 -----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|++... ..+....+.++.++|+|||++++-+
T Consensus 148 ~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 1478999998653 3467888999999999999998744
No 168
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.63 E-value=5e-15 Score=97.65 Aligned_cols=98 Identities=11% Similarity=0.015 Sum_probs=78.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++.+... +++++..|+....
T Consensus 76 ~vLDlG~G~G~~~~~la~~~~----------~~~~v~~vD~s~~~~~~~~~~~~~~~-------~v~~~~~d~~~~~~~~ 138 (227)
T 1g8a_A 76 SVLYLGIASGTTASHVSDIVG----------WEGKIFGIEFSPRVLRELVPIVEERR-------NIVPILGDATKPEEYR 138 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHC----------TTSEEEEEESCHHHHHHHHHHHSSCT-------TEEEEECCTTCGGGGT
T ss_pred EEEEEeccCCHHHHHHHHHhC----------CCeEEEEEECCHHHHHHHHHHHhccC-------CCEEEEccCCCcchhh
Confidence 699999999999999998864 24689999999999999988876542 8999999987632
Q ss_pred CCCCCeeEEEEccccccccCH-HHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~-~~~l~~~~~~L~p~G~l~~~ 119 (131)
...++||+|++... .++. ...+.++.+.|+|||++++.
T Consensus 139 ~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 139 ALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 12358999998654 2333 34499999999999999886
No 169
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.63 E-value=3.7e-15 Score=103.06 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=85.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|..+..+++..+ ...+++++|+++.+++.+++++...+.. ++.++..|....+...
T Consensus 121 ~VLDlg~G~G~~t~~la~~~~----------~~~~v~avD~s~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 121 IVADMAAAPGGKTSYLAQLMR----------NDGVIYAFDVDENRLRETRLNLSRLGVL-----NVILFHSSSLHIGELN 185 (315)
T ss_dssp EEEECCSSCSHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHHTCC-----SEEEESSCGGGGGGGC
T ss_pred EEEEeCCCCCHHHHHHHHHhC----------CCCEEEEEcCCHHHHHHHHHHHHHhCCC-----eEEEEECChhhccccc
Confidence 699999999999999998764 3578999999999999999999887654 7999999988765445
Q ss_pred CCeeEEEEccc------cccccC----------------HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFG------IRNVTR----------------IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~------l~~~~~----------------~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++... ++..++ ...++.++.++|||||++++..++.
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 68999998532 222121 1478999999999999999876654
No 170
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=2.8e-15 Score=101.73 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=85.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+++.+++.++++.+..++. ++.++.+|+.+.+. .
T Consensus 122 ~VLDlgcG~G~~s~~la~~~~-----------~~~V~~vD~s~~av~~a~~n~~~n~l~-----~~~~~~~d~~~~~~-~ 184 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPLAKYSK-----------PKLVYAIEKNPTAYHYLCENIKLNKLN-----NVIPILADNRDVEL-K 184 (272)
T ss_dssp EEEETTCTTTTTHHHHHHHTC-----------CSEEEEEECCHHHHHHHHHHHHHTTCS-----SEEEEESCGGGCCC-T
T ss_pred EEEEecCcCCHHHHHHHHhCC-----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEECChHHcCc-c
Confidence 689999999999999988753 468999999999999999999887664 78899999887733 5
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++.... +....+.++.+.|+|||++++.+...
T Consensus 185 ~~~D~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 185 DVADRVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp TCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCceEEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 689999987653 56678899999999999999877654
No 171
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.62 E-value=2.6e-15 Score=105.78 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=81.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||||||+|-++..+++. +..+|+++|.|+ ++..|++.++.+++.+ +++++..+++++.++
T Consensus 86 ~VLDvG~GtGiLs~~Aa~a------------GA~~V~ave~s~-~~~~a~~~~~~n~~~~----~i~~i~~~~~~~~lp- 147 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQA------------GARRVYAVEASA-IWQQAREVVRFNGLED----RVHVLPGPVETVELP- 147 (376)
T ss_dssp EEEEETCTTSHHHHHHHHT------------TCSEEEEEECST-THHHHHHHHHHTTCTT----TEEEEESCTTTCCCS-
T ss_pred EEEEeCCCccHHHHHHHHh------------CCCEEEEEeChH-HHHHHHHHHHHcCCCc----eEEEEeeeeeeecCC-
Confidence 6899999999998877665 356899999985 8899999999888875 899999999988765
Q ss_pred CCeeEEEEcc---ccccccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAF---GIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~---~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
+++|+|++-+ .+.+-..+..++....++|+|||.++
T Consensus 148 e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 148 EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 6799999843 34444577888888999999999876
No 172
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.62 E-value=7.2e-16 Score=97.35 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=80.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|||+|||+|.++..+++..+ +..+++++|+++ ++.. . ++.+...|+.+.+
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~~----------~~~~v~~~D~~~-~~~~--------~-------~~~~~~~d~~~~~~~~ 78 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQIG----------GKGRIIACDLLP-MDPI--------V-------GVDFLQGDFRDELVMK 78 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHHC----------TTCEEEEEESSC-CCCC--------T-------TEEEEESCTTSHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHhC----------CCCeEEEEECcc-cccc--------C-------cEEEEEcccccchhhh
Confidence 689999999999999988863 257999999998 5421 1 7889999988765
Q ss_pred -----CCCCCeeEEEEccccccccCH-----------HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 79 -----IESDSYSAYTIAFGIRNVTRI-----------DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~~~-----------~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++.++||+|++...+++.... ...+.++.++|+|||.+++..+....
T Consensus 79 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 79 ALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred hhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 566789999998888777654 68899999999999999987765543
No 173
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.62 E-value=1.9e-15 Score=102.13 Aligned_cols=108 Identities=13% Similarity=0.004 Sum_probs=83.4
Q ss_pred ceeeeeccc--chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLVFP--GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~G~--G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
.|||+|||+ +.++..++.... +..+|+++|.|+.|+..+++++..... .++.|+..|+.+..
T Consensus 81 q~LDLGcG~pT~~~~~~la~~~~----------P~arVv~VD~sp~mLa~Ar~~l~~~~~-----~~~~~v~aD~~~~~~ 145 (277)
T 3giw_A 81 QFLDIGTGIPTSPNLHEIAQSVA----------PESRVVYVDNDPIVLTLSQGLLASTPE-----GRTAYVEADMLDPAS 145 (277)
T ss_dssp EEEEESCCSCCSSCHHHHHHHHC----------TTCEEEEEECCHHHHHTTHHHHCCCSS-----SEEEEEECCTTCHHH
T ss_pred EEEEeCCCCCcccHHHHHHHHHC----------CCCEEEEEeCChHHHHHHHHHhccCCC-----CcEEEEEecccChhh
Confidence 489999997 444555555442 368999999999999999998865321 17999999988752
Q ss_pred ---CC--CCCee-----EEEEccccccccC---HHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 79 ---IE--SDSYS-----AYTIAFGIRNVTR---IDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 79 ---~~--~~~~D-----~i~~~~~l~~~~~---~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.+ ...|| .|+++.++||+++ +...+.++.+.|+|||+|++.+....
T Consensus 146 ~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 146 ILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred hhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 01 23454 5888999999987 56899999999999999999877654
No 174
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.62 E-value=2.5e-15 Score=99.70 Aligned_cols=104 Identities=11% Similarity=0.052 Sum_probs=84.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC----
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---- 77 (131)
+|||+|||+|..+..+++.++ ...+++++|+++.+++.+++++...+..+ +++++..|..+.
T Consensus 75 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~----~i~~~~~d~~~~l~~l 140 (232)
T 3cbg_A 75 QVLEIGVFRGYSALAMALQLP----------PDGQIIACDQDPNATAIAKKYWQKAGVAE----KISLRLGPALATLEQL 140 (232)
T ss_dssp EEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCHHHHHHHHHHHHHHTCGG----GEEEEESCHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEEcCHHHHHHHH
Confidence 699999999999999988764 25789999999999999999988766543 799999986542
Q ss_pred CCCC--CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 78 PIES--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 78 ~~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
+... ++||+|++... ..+....+.++.+.|+|||++++.+..
T Consensus 141 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 2223 68999998654 356778899999999999999886544
No 175
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.62 E-value=2.6e-15 Score=99.09 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=80.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc-----CCCCCCCceeEEecccc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF-----KVPVPNPRLRFLEANAE 75 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~ 75 (131)
.+|||+|||+|..+..+++..+...+ ....+++++|+++.+++.++++....+ .. ++.++..|..
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~-----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-----~v~~~~~d~~ 155 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGV-----DADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG-----QLLIVEGDGR 155 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCC-----CTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT-----SEEEEESCGG
T ss_pred CEEEEECCCccHHHHHHHHhcccccC-----CccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC-----ceEEEECCcc
Confidence 36999999999999999887540000 002589999999999999999887643 22 7899999987
Q ss_pred cCCCCC-CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 76 ELPIES-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 76 ~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
. +++. .+||+|++...++++. .++.+.|+|||++++.-.
T Consensus 156 ~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 156 K-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp G-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred c-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 6 3333 6899999998887765 678999999999988654
No 176
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.62 E-value=1e-15 Score=97.12 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=76.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. . +++++|+|+.+++. . .+++++..|+.+ +++.
T Consensus 26 ~vLD~GcG~G~~~~~l~~~-------------~-~v~gvD~s~~~~~~-------~-------~~~~~~~~d~~~-~~~~ 76 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKR-------------N-TVVSTDLNIRALES-------H-------RGGNLVRADLLC-SINQ 76 (170)
T ss_dssp EEEEETCTTCHHHHHHTTT-------------S-EEEEEESCHHHHHT-------C-------SSSCEEECSTTT-TBCG
T ss_pred eEEEeccCccHHHHHHHhc-------------C-cEEEEECCHHHHhc-------c-------cCCeEEECChhh-hccc
Confidence 6999999999999988775 5 99999999999887 1 278999999877 4555
Q ss_pred CCeeEEEEccccccccCH---------HHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRI---------DKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~---------~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++||+|+++..+++.++. ...+.++.+.+ |||++++......
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 789999998888765433 57788888888 9999999775543
No 177
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.62 E-value=1.1e-14 Score=96.65 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=75.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
++|||+|||+|.++..+++..+ +..+|+++|+++.++....+...... ++.++..|+....
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~----------~~G~V~avD~s~~~l~~l~~~a~~r~-------nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIE----------LNGKAYGVEFSPRVVRELLLVAQRRP-------NIFPLLADARFPQSY 140 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHT----------TTSEEEEEECCHHHHHHHHHHHHHCT-------TEEEEECCTTCGGGT
T ss_pred CEEEEEeecCCHHHHHHHHHhC----------CCCEEEEEECcHHHHHHHHHHhhhcC-------CeEEEEcccccchhh
Confidence 4799999999999999998875 46799999999998766555444332 8999999987542
Q ss_pred -CCCCCeeEEEEccccccccCHHHHH-HHHHHhccCCcEEEEEe
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKAL-SEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l-~~~~~~L~p~G~l~~~~ 120 (131)
...++||+|++.... ++....+ ..+.+.|||||++++..
T Consensus 141 ~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp TTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 124689999987553 4444444 45566999999998863
No 178
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.62 E-value=6.7e-16 Score=97.35 Aligned_cols=102 Identities=10% Similarity=0.125 Sum_probs=79.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+. +++++..|+.+. + .
T Consensus 44 ~vLD~GcG~G~~~~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 44 RFLDPFAGSGAVGLEAASE-------------GWEAVLVEKDPEAVRLLKENVRRTGL------GARVVALPVEVFLPEA 104 (171)
T ss_dssp EEEEETCSSCHHHHHHHHT-------------TCEEEEECCCHHHHHHHHHHHHHHTC------CCEEECSCHHHHHHHH
T ss_pred eEEEeCCCcCHHHHHHHHC-------------CCeEEEEeCCHHHHHHHHHHHHHcCC------ceEEEeccHHHHHHhh
Confidence 6899999999999988876 34599999999999999999877652 588899987763 2 1
Q ss_pred --CCCCeeEEEEccccccccCHHHHHHHHH--HhccCCcEEEEEeccCC
Q psy890 80 --ESDSYSAYTIAFGIRNVTRIDKALSEAY--RVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~L~p~G~l~~~~~~~~ 124 (131)
..++||+|++...++ ......+..+. ++|+|||++++......
T Consensus 105 ~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred hccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 134799999987665 45556666676 99999999988655443
No 179
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.61 E-value=1.1e-14 Score=102.02 Aligned_cols=106 Identities=22% Similarity=0.154 Sum_probs=86.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
.|||+|||+|.++..++.... +..+++++|+++.+++.++++++..++. ++++...|+.+++.+.
T Consensus 206 ~vLD~gcGsG~~~ie~a~~~~----------~~~~v~g~Di~~~~i~~a~~n~~~~g~~-----~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 206 RVLDPFTGSGTIALEAASTLG----------PTSPVYAGDLDEKRLGLAREAALASGLS-----WIRFLRADARHLPRFF 270 (354)
T ss_dssp CEEESSCTTSHHHHHHHHHHC----------TTSCEEEEESCHHHHHHHHHHHHHTTCT-----TCEEEECCGGGGGGTC
T ss_pred EEEeCCCCcCHHHHHHHHhhC----------CCceEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEeCChhhCcccc
Confidence 689999999999999988762 2578999999999999999999887764 7999999999987666
Q ss_pred CCeeEEEEcccccc--cc------CHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRN--VT------RIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~--~~------~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
..||+|+++..... .. ....++.++.+.|+|||++++....
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 77999999544322 11 1367889999999999999987654
No 180
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.61 E-value=9.7e-15 Score=99.43 Aligned_cols=106 Identities=12% Similarity=0.021 Sum_probs=78.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-CHHHHHHHHHHh-----hhccCCCCCCCceeEEecccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRA-----RDLFKVPVPNPRLRFLEANAE 75 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~~ 75 (131)
+|||+|||+|.++..+++. ...+++++|+ ++.+++.++++. ...+.......++.+...+..
T Consensus 82 ~vLDlG~G~G~~~~~~a~~------------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~ 149 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFLA------------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWG 149 (281)
T ss_dssp EEEETTCTTSHHHHHHHHT------------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTT
T ss_pred eEEEecccccHHHHHHHHc------------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCC
Confidence 6999999999999877764 2348999999 899999999998 333322000015777755543
Q ss_pred cCC--C----CCCCeeEEEEccccccccCHHHHHHHHHHhcc---C--CcEEEEE
Q psy890 76 ELP--I----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLK---P--GGRFLCL 119 (131)
Q Consensus 76 ~~~--~----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~---p--~G~l~~~ 119 (131)
+.. + ..++||+|++..++++.++...++..+.++|+ | ||+++++
T Consensus 150 ~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 150 DSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 321 1 35789999999999999999999999999999 9 9987664
No 181
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.61 E-value=2.4e-15 Score=100.15 Aligned_cols=102 Identities=17% Similarity=0.127 Sum_probs=84.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ ...+++++|+++.+++.++++++..++.+ +++++.+|..+. + +
T Consensus 73 ~VLeiG~G~G~~~~~la~~~~----------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~----~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 73 KTIEVGVFTGYSLLLTALSIP----------DDGKITAIDFDREAYEIGLPFIRKAGVEH----KINFIESDAMLALDNL 138 (237)
T ss_dssp EEEEECCTTSHHHHHHHHHSC----------TTCEEEEEESCHHHHHHHHHHHHHTTCGG----GEEEEESCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEEcCHHHHHHHH
Confidence 699999999999999999865 36799999999999999999998877653 799999997653 2 2
Q ss_pred -----CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 -----ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 -----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|++... ..+....+..+.+.|+|||++++-+
T Consensus 139 ~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 2468999998643 3466788999999999999998754
No 182
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.61 E-value=7.7e-16 Score=108.73 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=78.8
Q ss_pred Cceeeeecc------cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc
Q psy890 1 MYILFYLVF------PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (131)
Q Consensus 1 ~~iLdig~G------~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 74 (131)
.+||||||| +|..+..+++.+. +..+++++|+|+.|. .. . ++++++.+|+
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~f----------P~a~V~GVDiSp~m~-------~~---~----~rI~fv~GDa 273 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSFF----------PRGQIYGLDIMDKSH-------VD---E----LRIRTIQGDQ 273 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHHC----------TTCEEEEEESSCCGG-------GC---B----TTEEEEECCT
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHhC----------CCCEEEEEECCHHHh-------hc---C----CCcEEEEecc
Confidence 369999999 6777777776642 367999999999862 11 1 2899999999
Q ss_pred ccCCCC------CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 75 EELPIE------SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 75 ~~~~~~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++++. .++||+|++.. .|++.+....+.++.++|||||++++.+...
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred cccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 887655 57899999874 4667788999999999999999999987763
No 183
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=4e-15 Score=102.61 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=83.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~ 78 (131)
++|||||||+|.++..+++..+ ..+++++|+++.+++.+++++.... . ++++++..|..+. .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-----------~~~v~~VEidp~vi~~Ar~~~~~~~-~----~rv~v~~~Da~~~l~~ 154 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-----------QSRNTVVELDAELARLSREWFDIPR-A----PRVKIRVDDARMVAES 154 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-----------TCEEEEEESCHHHHHHHHHHSCCCC-T----TTEEEEESCHHHHHHT
T ss_pred CEEEEEECCcCHHHHHHHHHCC-----------CcEEEEEECCHHHHHHHHHhccccC-C----CceEEEECcHHHHHhh
Confidence 3799999999999999998754 5699999999999999999886432 1 3899999997764 2
Q ss_pred CCCCCeeEEEEccccccc-c-C--HHHHHHHHHHhccCCcEEEEEecc
Q psy890 79 IESDSYSAYTIAFGIRNV-T-R--IDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~-~-~--~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.+.++||+|++....+.. + . ...++..+++.|+|||++++...+
T Consensus 155 ~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 345789999996543322 1 1 268899999999999999876543
No 184
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.61 E-value=1.4e-14 Score=96.43 Aligned_cols=99 Identities=11% Similarity=0.088 Sum_probs=83.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+..+ ++.+...|+.+...+.
T Consensus 94 ~vldiG~G~G~~~~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 94 RVLEFGTGSGALLAVLSEV-------------AGEVWTFEAVEEFYKTAQKNLKKFNLGK----NVKFFNVDFKDAEVPE 156 (248)
T ss_dssp EEEEECCTTSHHHHHHHHH-------------SSEEEEECSCHHHHHHHHHHHHHTTCCT----TEEEECSCTTTSCCCT
T ss_pred EEEEeCCCccHHHHHHHHh-------------CCEEEEEecCHHHHHHHHHHHHHcCCCC----cEEEEEcChhhcccCC
Confidence 6899999999999999887 3589999999999999999988766543 7999999987754355
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|++. .+++..++.++.+.|+|||++++....
T Consensus 157 ~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 157 GIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 689999973 456778899999999999999887643
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.60 E-value=3.7e-15 Score=102.60 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=79.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh--ccCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD--LFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|.++..+++..+ ..+++++|+++.+++.++++++. ....+ ++++++..|..+...
T Consensus 98 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~---~~v~~~~~D~~~~~~ 163 (304)
T 3bwc_A 98 RVLIIGGGDGGVLREVLRHGT-----------VEHCDLVDIDGEVMEQSKQHFPQISRSLAD---PRATVRVGDGLAFVR 163 (304)
T ss_dssp EEEEEECTTSHHHHHHHTCTT-----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGC---TTEEEEESCHHHHHH
T ss_pred eEEEEcCCCCHHHHHHHhCCC-----------CCEEEEEECCHHHHHHHHHHhHHhhcccCC---CcEEEEECcHHHHHH
Confidence 699999999999999987632 57999999999999999998742 11111 289999999877543
Q ss_pred --CCCCeeEEEEccccccccCH----HHHHHHHHHhccCCcEEEEEe
Q psy890 80 --ESDSYSAYTIAFGIRNVTRI----DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 --~~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|++....+..+.. ..++.++++.|+|||++++..
T Consensus 164 ~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 164 QTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp SSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 46789999997665543322 688999999999999998864
No 186
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.60 E-value=6.6e-15 Score=99.92 Aligned_cols=108 Identities=10% Similarity=0.107 Sum_probs=86.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 79 (131)
.+|||+|||+|..+..+++..+ ...+++++|+++.+++.++++....+.. ++.++..|....+.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~----------~~~~v~avD~~~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMK----------NKGTIVAVEISKTRTKALKSNINRMGVL-----NTIIINADMRKYKDY 149 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTT----------TCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCHHHHHHH
T ss_pred CEEEEeCCCccHHHHHHHHHcC----------CCCEEEEECCCHHHHHHHHHHHHHhCCC-----cEEEEeCChHhcchh
Confidence 3699999999999999988764 2479999999999999999999877654 79999999877643
Q ss_pred ---CCCCeeEEEEcccccc------------------ccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 ---ESDSYSAYTIAFGIRN------------------VTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ---~~~~~D~i~~~~~l~~------------------~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
..++||+|++...... ......++.++.++|||||++++..++.
T Consensus 150 ~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 150 LLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 2568999998633221 1244788999999999999999876654
No 187
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.60 E-value=5.5e-15 Score=97.40 Aligned_cols=105 Identities=9% Similarity=0.042 Sum_probs=81.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC----CCCCCCceeEEeccccc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK----VPVPNPRLRFLEANAEE 76 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~ 76 (131)
.+|||+|||+|..+..+++..... ..+..+++++|+++.+++.++++....+. . .++.++..|...
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~----~~v~~~~~d~~~ 151 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVL------ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKI----DNFKIIHKNIYQ 151 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTT------TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSS----TTEEEEECCGGG
T ss_pred CEEEEECCCCCHHHHHHHHHhccc------CCCCCEEEEEeCCHHHHHHHHHHHHHcCcccccc----CCEEEEECChHh
Confidence 369999999999999988874200 00135899999999999999999876552 2 179999999877
Q ss_pred CC----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 77 LP----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 77 ~~----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.. ....+||+|++...++++ +.++.+.|+|||++++.-.
T Consensus 152 ~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 152 VNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred cccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 54 445789999999888765 3778899999999988643
No 188
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.60 E-value=2.4e-15 Score=100.03 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=83.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-- 78 (131)
+|||+|||+|..+..+++..+ ...+++++|+++.+++.+++++...+... ++.++..|..+. +
T Consensus 63 ~VLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~----~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 63 RIIEIGTFTGYSSLCFASALP----------EDGKILCCDVSEEWTNVARKYWKENGLEN----KIFLKLGSALETLQVL 128 (239)
T ss_dssp EEEEECCTTCHHHHHHHHHSC----------TTCEEEEEESCHHHHHHHHHHHHHTTCGG----GEEEEESCHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCC----CEEEEECCHHHHHHHH
Confidence 699999999999999998864 25799999999999999999988766542 699999986542 1
Q ss_pred ------------CCC--CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 79 ------------IES--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ------------~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
++. ++||+|++... .++....+.++.+.|+|||++++.+.
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 222 68999998754 44567889999999999999998653
No 189
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.60 E-value=2.7e-15 Score=98.92 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=84.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|..+..+++.++ ...+++++|+++.+++.+++++...+..+ +++++..|+.+. + +
T Consensus 72 ~vLdiG~G~G~~~~~la~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~----~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 72 KALDLGTFTGYSALALALALP----------ADGRVVTCEVDAQPPELGRPLWRQAEAEH----KIDLRLKPALETLDEL 137 (229)
T ss_dssp EEEEECCTTSHHHHHHHTTSC----------TTCEEEEEESCSHHHHHHHHHHHHTTCTT----TEEEEESCHHHHHHHH
T ss_pred EEEEEcCCccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHCCCCC----eEEEEEcCHHHHHHHH
Confidence 699999999999999988754 35799999999999999999998776643 899999987553 1 1
Q ss_pred C--C--CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 80 E--S--DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 80 ~--~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
. . ++||+|++... ..+....+.++.+.|+|||++++.+.
T Consensus 138 ~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 1 1 68999998654 34567889999999999999988654
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.60 E-value=3.2e-15 Score=108.51 Aligned_cols=100 Identities=15% Similarity=0.096 Sum_probs=82.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|.++..+++. +..+++++|+|+ +++.+++++...++.+ +++++..|+.+.+++
T Consensus 160 ~~VLDiGcGtG~la~~la~~------------~~~~V~gvD~s~-~l~~A~~~~~~~gl~~----~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQA------------GARKIYAVEAST-MAQHAEVLVKSNNLTD----RIVVIPGKVEEVSLP 222 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHT------------TCSEEEEEECHH-HHHHHHHHHHHTTCTT----TEEEEESCTTTCCCS
T ss_pred CEEEEecCcccHHHHHHHHc------------CCCEEEEEEcHH-HHHHHHHHHHHcCCCC----cEEEEECchhhCccC
Confidence 36999999999999888764 256999999998 9999999988877654 899999999887654
Q ss_pred CCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEE
Q psy890 81 SDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~ 118 (131)
++||+|++...++++. +....+.++.++|+|||++++
T Consensus 223 -~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp -SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred -CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 5799999987766553 456677889999999999974
No 191
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.60 E-value=5.2e-15 Score=101.41 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=79.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc---CCCCCCCceeEEecccccC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF---KVPVPNPRLRFLEANAEEL- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~- 77 (131)
+|||+|||+|.++..+++..+ ..+++++|+++.+++.++++++... +.+ ++++++..|..+.
T Consensus 86 ~VLdiG~G~G~~~~~l~~~~~-----------~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~---~rv~~~~~D~~~~l 151 (294)
T 3adn_A 86 HVLIIGGGDGAMLREVTRHKN-----------VESITMVEIDAGVVSFCRQYLPNHNAGSYDD---PRFKLVIDDGVNFV 151 (294)
T ss_dssp EEEEESCTTCHHHHHHHTCTT-----------CCEEEEECSCTTHHHHHHHHCHHHHSSCTTC---TTCCEECSCSCC--
T ss_pred EEEEEeCChhHHHHHHHhCCC-----------CCEEEEEECCHHHHHHHHHhhhhcccccccC---CceEEEEChHHHHH
Confidence 699999999999999988643 5789999999999999999887542 222 3899999997764
Q ss_pred CCCCCCeeEEEEccccccccC--H--HHHHHHHHHhccCCcEEEEEe
Q psy890 78 PIESDSYSAYTIAFGIRNVTR--I--DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~--~--~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....++||+|++.......+. . ..++..+.+.|+|||++++..
T Consensus 152 ~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 152 NQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 334578999999654333222 1 678999999999999998753
No 192
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.60 E-value=5.8e-15 Score=102.73 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=78.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc----------CCCCCCCceeEE
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF----------KVPVPNPRLRFL 70 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 70 (131)
.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+++++...+ .. .+++++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~----~~v~~~ 172 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVG----------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP----DNVDFI 172 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC----------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC----CCEEEE
T ss_pred CEEEEeCCCcCHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC----CceEEE
Confidence 3699999999999999988764 25789999999999999999887532 11 279999
Q ss_pred ecccccC--CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 71 EANAEEL--PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 71 ~~d~~~~--~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
..|+.+. +++.++||+|++.. +++...+.++.+.|+|||++++....
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998876 35566899999853 34445789999999999999886543
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.60 E-value=7.9e-15 Score=97.29 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=79.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ .+++++|+++.+++.++++....+.. ++.+...|.. .+++.
T Consensus 94 ~vLdiG~G~G~~~~~la~~~~------------~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~-~~~~~ 155 (235)
T 1jg1_A 94 NILEVGTGSGWNAALISEIVK------------TDVYTIERIPELVEFAKRNLERAGVK-----NVHVILGDGS-KGFPP 155 (235)
T ss_dssp CEEEECCTTSHHHHHHHHHHC------------SCEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGG-GCCGG
T ss_pred EEEEEeCCcCHHHHHHHHHhC------------CEEEEEeCCHHHHHHHHHHHHHcCCC-----CcEEEECCcc-cCCCC
Confidence 699999999999999988741 58999999999999999998876654 6889999873 23333
Q ss_pred -CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 -DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.+||+|++...++++.+ ++.+.|+|||++++.....
T Consensus 156 ~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecC
Confidence 45999999998887763 6789999999998865433
No 194
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.59 E-value=2.7e-15 Score=105.17 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=82.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+ +.+++.+++ . .+++++..|+.+ +++
T Consensus 196 ~vlDvG~G~G~~~~~l~~~~p-----------~~~~~~~D~-~~~~~~a~~----~-------~~v~~~~~d~~~-~~~- 250 (358)
T 1zg3_A 196 SLVDVGGGTGGVTKLIHEIFP-----------HLKCTVFDQ-PQVVGNLTG----N-------ENLNFVGGDMFK-SIP- 250 (358)
T ss_dssp EEEEETCTTSHHHHHHHHHCT-----------TSEEEEEEC-HHHHSSCCC----C-------SSEEEEECCTTT-CCC-
T ss_pred EEEEECCCcCHHHHHHHHHCC-----------CCeEEEecc-HHHHhhccc----C-------CCcEEEeCccCC-CCC-
Confidence 689999999999999998864 678999999 677765543 1 169999999877 554
Q ss_pred CCeeEEEEccccccccCHH--HHHHHHHHhccC---CcEEEEEeccCCC
Q psy890 82 DSYSAYTIAFGIRNVTRID--KALSEAYRVLKP---GGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p---~G~l~~~~~~~~~ 125 (131)
.||+|++.+++|++++.. ++|.++++.|+| ||++++.|...+.
T Consensus 251 -~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 251 -SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDE 298 (358)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECT
T ss_pred -CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCC
Confidence 499999999999999866 999999999999 9999998876543
No 195
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.58 E-value=1.9e-15 Score=111.69 Aligned_cols=105 Identities=11% Similarity=0.114 Sum_probs=86.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~ 78 (131)
++|||||||+|.++..+++. +.+|+|+|.++.+++.|+......+.. ++.|...+++++ .
T Consensus 68 ~~vLDvGCG~G~~~~~la~~-------------ga~V~giD~~~~~i~~a~~~a~~~~~~-----~~~~~~~~~~~~~~~ 129 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASK-------------GATIVGIDFQQENINVCRALAEENPDF-----AAEFRVGRIEEVIAA 129 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHTSTTS-----EEEEEECCHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHhC-------------CCEEEEECCCHHHHHHHHHHHHhcCCC-----ceEEEECCHHHHhhh
Confidence 47999999999999999886 789999999999999999988765533 789999999887 3
Q ss_pred CCCCCeeEEEEccccccccCHH--HHHHHHHHhccCCcEEEEEeccC
Q psy890 79 IESDSYSAYTIAFGIRNVTRID--KALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
...++||+|+|..+++|++++. ..+..+.+.|+++|..++.....
T Consensus 130 ~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 130 LEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp CCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred ccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 5567899999999999998765 33556777788888766655443
No 196
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.58 E-value=4.4e-15 Score=97.06 Aligned_cols=85 Identities=25% Similarity=0.287 Sum_probs=72.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+. .+++++|+|+. ++.+...|+.+.+++.
T Consensus 70 ~vLDiG~G~G~~~~~l~----------------~~v~~~D~s~~--------------------~~~~~~~d~~~~~~~~ 113 (215)
T 2zfu_A 70 VVADFGCGDCRLASSIR----------------NPVHCFDLASL--------------------DPRVTVCDMAQVPLED 113 (215)
T ss_dssp CEEEETCTTCHHHHHCC----------------SCEEEEESSCS--------------------STTEEESCTTSCSCCT
T ss_pred eEEEECCcCCHHHHHhh----------------ccEEEEeCCCC--------------------CceEEEeccccCCCCC
Confidence 69999999999877552 36999999885 2456778888877777
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|++..++|+ .++..++.++.++|+|||++++.++..
T Consensus 114 ~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 114 ESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp TCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 89999999999974 889999999999999999999987654
No 197
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.58 E-value=1.1e-14 Score=99.30 Aligned_cols=105 Identities=11% Similarity=0.031 Sum_probs=82.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..++.. + ..+++++|+|+.+++.++++....+... +++++..|+.+. ++
T Consensus 126 ~vLDlG~GsG~~~~~la~~-~-----------~~~v~~vDis~~al~~A~~n~~~~~l~~----~v~~~~~D~~~~-~~- 187 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKF-S-----------DAIVFATDVSSKAVEIARKNAERHGVSD----RFFVRKGEFLEP-FK- 187 (284)
T ss_dssp EEEEESCTTSHHHHHHHHH-S-----------SCEEEEEESCHHHHHHHHHHHHHTTCTT----SEEEEESSTTGG-GG-
T ss_pred EEEEEeCchhHHHHHHHHC-C-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----ceEEEECcchhh-cc-
Confidence 6999999999999999887 5 6799999999999999999998877653 699999998763 22
Q ss_pred CCe---eEEEEccccc-----------ccc--------CHHHHHHHHH-HhccCCcEEEEEeccCCC
Q psy890 82 DSY---SAYTIAFGIR-----------NVT--------RIDKALSEAY-RVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 82 ~~~---D~i~~~~~l~-----------~~~--------~~~~~l~~~~-~~L~p~G~l~~~~~~~~~ 125 (131)
++| |+|+++-... +.+ +...++.++. +.++|||++++ +++...
T Consensus 188 ~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~-e~~~~q 253 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM-EIGEDQ 253 (284)
T ss_dssp GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE-ECCTTC
T ss_pred cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE-EECchH
Confidence 468 9999972211 111 1237889999 99999999986 555443
No 198
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.58 E-value=6.4e-15 Score=99.01 Aligned_cols=99 Identities=20% Similarity=0.149 Sum_probs=79.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+. .+++...|+.+. ++.
T Consensus 123 ~VLDiGcG~G~l~~~la~~-------------g~~v~gvDi~~~~v~~a~~n~~~~~~------~v~~~~~d~~~~-~~~ 182 (254)
T 2nxc_A 123 KVLDLGTGSGVLAIAAEKL-------------GGKALGVDIDPMVLPQAEANAKRNGV------RPRFLEGSLEAA-LPF 182 (254)
T ss_dssp EEEEETCTTSHHHHHHHHT-------------TCEEEEEESCGGGHHHHHHHHHHTTC------CCEEEESCHHHH-GGG
T ss_pred EEEEecCCCcHHHHHHHHh-------------CCeEEEEECCHHHHHHHHHHHHHcCC------cEEEEECChhhc-CcC
Confidence 6999999999999887764 34999999999999999999876552 377888887652 345
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++||+|+++...+ .....+.++.+.|+|||++++.....
T Consensus 183 ~~fD~Vv~n~~~~---~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 183 GPFDLLVANLYAE---LHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp CCEEEEEEECCHH---HHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CCCCEEEECCcHH---HHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 6899999876543 35678999999999999999876543
No 199
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.57 E-value=1.9e-14 Score=95.13 Aligned_cols=102 Identities=11% Similarity=-0.044 Sum_probs=82.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|+|+|||+|.++..+++..+ ..+++++|+++.+++.|++++...++.+ ++++..+|..+...+.
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~-----------~~~V~AvDi~~~al~~A~~N~~~~gl~~----~I~~~~gD~l~~~~~~ 88 (230)
T 3lec_A 24 RLLDVGSDHAYLPIFLLQMGY-----------CDFAIAGEVVNGPYQSALKNVSEHGLTS----KIDVRLANGLSAFEEA 88 (230)
T ss_dssp EEEEETCSTTHHHHHHHHTTC-----------EEEEEEEESSHHHHHHHHHHHHHTTCTT----TEEEEECSGGGGCCGG
T ss_pred EEEEECCchHHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEECchhhccccc
Confidence 689999999999999988642 5689999999999999999999988775 8999999987754444
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|+..++.. .-...++.+..+.|+++|++++..
T Consensus 89 ~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 89 DNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp GCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred cccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 4799988654322 235677888889999999988754
No 200
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.57 E-value=5.3e-14 Score=101.46 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=87.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
.+|||+|||+|..+..++...+ ...+++++|+++.++..+++++...+.. ++.++..|....+
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~----------~~~~v~a~D~s~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMK----------NKGKIYAFDVDKMRMKRLKDFVKRMGIK-----IVKPLVKDARKAPEI 325 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCTTCCSSS
T ss_pred CEEEEeCCCccHHHHHHHHHcC----------CCCEEEEEcCCHHHHHHHHHHHHHcCCC-----cEEEEEcChhhcchh
Confidence 3699999999999999998864 2378999999999999999999877654 7999999988765
Q ss_pred CCCCCeeEEEEcc------ccccccCH----------------HHHHHHHHHhccCCcEEEEEeccCC
Q psy890 79 IESDSYSAYTIAF------GIRNVTRI----------------DKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 79 ~~~~~~D~i~~~~------~l~~~~~~----------------~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++.++||+|++.. .++..++. ..++.++.++|||||++++..++..
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 4447899999732 22322222 5789999999999999998877654
No 201
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.56 E-value=5.2e-15 Score=98.48 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=76.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~ 78 (131)
+|||+|||+|..+..+++.+.... +..+|+++|+++.+++.++. .. .+++++.+|..+. +
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~-------~~~~V~gvD~s~~~l~~a~~------~~----~~v~~~~gD~~~~~~l~ 146 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMG-------IDCQVIGIDRDLSRCQIPAS------DM----ENITLHQGDCSDLTTFE 146 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTT-------CCCEEEEEESCCTTCCCCGG------GC----TTEEEEECCSSCSGGGG
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcC-------CCCEEEEEeCChHHHHHHhc------cC----CceEEEECcchhHHHHH
Confidence 699999999999999988621000 36799999999999887761 11 2899999998874 4
Q ss_pred CC-CCCeeEEEEccccccccCHHHHHHHHHH-hccCCcEEEEEe
Q psy890 79 IE-SDSYSAYTIAFGIRNVTRIDKALSEAYR-VLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~-~L~p~G~l~~~~ 120 (131)
.. ..+||+|++... | .+....+.++.+ .|+|||++++.+
T Consensus 147 ~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 147 HLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp GGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred hhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 32 347999998665 3 377889999997 999999998854
No 202
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=3.1e-14 Score=93.96 Aligned_cols=101 Identities=14% Similarity=0.019 Sum_probs=81.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|+|+|||+|.++..+++..+ ..+++++|+++.+++.|+++....++.+ ++++..+|.... ++.
T Consensus 18 ~VlDIGtGsG~l~i~la~~~~-----------~~~V~avDi~~~al~~A~~N~~~~gl~~----~i~~~~~d~l~~-l~~ 81 (225)
T 3kr9_A 18 ILLDVGSDHAYLPIELVERGQ-----------IKSAIAGEVVEGPYQSAVKNVEAHGLKE----KIQVRLANGLAA-FEE 81 (225)
T ss_dssp EEEEETCSTTHHHHHHHHTTS-----------EEEEEEEESSHHHHHHHHHHHHHTTCTT----TEEEEECSGGGG-CCG
T ss_pred EEEEeCCCcHHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCc----eEEEEECchhhh-ccc
Confidence 689999999999999988643 5689999999999999999999988775 799999997542 222
Q ss_pred -CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 -DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|+...+-. .-...++.+..+.|+++|++++..
T Consensus 82 ~~~~D~IviaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 82 TDQVSVITIAGMGG--RLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp GGCCCEEEEEEECH--HHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred CcCCCEEEEcCCCh--HHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3699988754321 225778999999999999987743
No 203
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.56 E-value=2.1e-14 Score=92.83 Aligned_cols=96 Identities=10% Similarity=0.089 Sum_probs=73.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCC-CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|||+|||+|.++..+++..+ . ..+++++|+|+.. .. +++.++..|+.+.+
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~----------~~~~~v~gvD~s~~~-----------~~-----~~v~~~~~d~~~~~~~ 78 (201)
T 2plw_A 25 IILDIGCYPGSWCQVILERTK----------NYKNKIIGIDKKIMD-----------PI-----PNVYFIQGEIGKDNMN 78 (201)
T ss_dssp EEEEESCTTCHHHHHHHHHTT----------TSCEEEEEEESSCCC-----------CC-----TTCEEEECCTTTTSSC
T ss_pred EEEEeCCCCCHHHHHHHHHcC----------CCCceEEEEeCCccC-----------CC-----CCceEEEccccchhhh
Confidence 689999999999999998753 1 4789999999821 11 27888888887755
Q ss_pred -----------------------CCCCCeeEEEEccccccc----cCH-------HHHHHHHHHhccCCcEEEEEeccC
Q psy890 79 -----------------------IESDSYSAYTIAFGIRNV----TRI-------DKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 79 -----------------------~~~~~~D~i~~~~~l~~~----~~~-------~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++..+||+|++...+++. .+. ..++.++.++|+|||.+++..+..
T Consensus 79 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 79 NIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp CC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 455789999998776653 121 247888999999999998865544
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.56 E-value=1.2e-14 Score=100.52 Aligned_cols=105 Identities=14% Similarity=0.097 Sum_probs=82.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--c-CCCCCCCceeEEecccccC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--F-KVPVPNPRLRFLEANAEEL- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~d~~~~- 77 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++.. + +.+ ++++++..|..+.
T Consensus 80 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~---~~v~~~~~D~~~~l 145 (314)
T 1uir_A 80 RVLIVGGGEGATLREVLKHPT-----------VEKAVMVDIDGELVEVAKRHMPEWHQGAFDD---PRAVLVIDDARAYL 145 (314)
T ss_dssp EEEEEECTTSHHHHHHTTSTT-----------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGC---TTEEEEESCHHHHH
T ss_pred eEEEEcCCcCHHHHHHHhcCC-----------CCEEEEEECCHHHHHHHHHHhHhhccccccC---CceEEEEchHHHHH
Confidence 699999999999999988643 578999999999999999987641 1 211 2899999997763
Q ss_pred CCCCCCeeEEEEcccccc---cc--C--HHHHHHHHHHhccCCcEEEEEe
Q psy890 78 PIESDSYSAYTIAFGIRN---VT--R--IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~---~~--~--~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+...++||+|++....+. .+ . ...++.++++.|+|||++++..
T Consensus 146 ~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 146 ERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred HhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 334578999999766554 11 1 3688999999999999998753
No 205
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.56 E-value=2.9e-14 Score=95.01 Aligned_cols=102 Identities=12% Similarity=-0.014 Sum_probs=82.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++..+ ..+++++|+++.+++.|++++...++.+ ++++..+|..+...+.
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~-----------~~~V~avDi~~~al~~A~~N~~~~gl~~----~I~v~~gD~l~~~~~~ 88 (244)
T 3gnl_A 24 RIADIGSDHAYLPCFAVKNQT-----------ASFAIAGEVVDGPFQSAQKQVRSSGLTE----QIDVRKGNGLAVIEKK 88 (244)
T ss_dssp EEEEETCSTTHHHHHHHHTTS-----------EEEEEEEESSHHHHHHHHHHHHHTTCTT----TEEEEECSGGGGCCGG
T ss_pred EEEEECCccHHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCc----eEEEEecchhhccCcc
Confidence 689999999999999988642 5689999999999999999999888764 7999999977654333
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|++..+.. .-...++.+..+.|++++++++..
T Consensus 89 ~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 89 DAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp GCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 4699988743322 235677888899999999988754
No 206
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.56 E-value=1.9e-14 Score=100.15 Aligned_cols=104 Identities=16% Similarity=0.195 Sum_probs=80.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~-- 77 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++.. ++.+ ++++++..|..+.
T Consensus 123 ~VLdIG~G~G~~a~~la~~~~-----------~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~---~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 123 KVLVIGGGDGGVLREVARHAS-----------IEQIDMCEIDKMVVDVSKQFFPDVAIGYED---PRVNLVIGDGVAFLK 188 (334)
T ss_dssp EEEEETCSSSHHHHHHTTCTT-----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGS---TTEEEEESCHHHHHH
T ss_pred EEEEECCCccHHHHHHHHcCC-----------CCEEEEEECCHHHHHHHHHHHHhhccccCC---CcEEEEECCHHHHHH
Confidence 699999999999999987643 579999999999999999987642 2211 2899999997664
Q ss_pred CCCCCCeeEEEEcccccc--ccC--HHHHHHHHHHhccCCcEEEEE
Q psy890 78 PIESDSYSAYTIAFGIRN--VTR--IDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~--~~~--~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..+.++||+|++...... ... ...++.++.+.|+|||++++.
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 234578999998654211 112 368899999999999999874
No 207
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.55 E-value=1.2e-14 Score=97.31 Aligned_cols=78 Identities=4% Similarity=-0.097 Sum_probs=63.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~ 78 (131)
+|||+|||+|.++..++...+ ..+++++|+|+.+++.++++....+... +++++..|+.+. +
T Consensus 68 ~vLDlG~G~G~~~~~la~~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~ 132 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATLN-----------GWYFLATEVDDMCFNYAKKNVEQNNLSD----LIKVVKVPQKTLLMDA 132 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHHH-----------CCEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEECCTTCSSTTT
T ss_pred EEEEeCCChhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHHcCCCc----cEEEEEcchhhhhhhh
Confidence 699999999999998888764 5789999999999999999998776653 699999997652 3
Q ss_pred CCC---CCeeEEEEccccc
Q psy890 79 IES---DSYSAYTIAFGIR 94 (131)
Q Consensus 79 ~~~---~~~D~i~~~~~l~ 94 (131)
++. ++||+|+++...+
T Consensus 133 ~~~~~~~~fD~i~~npp~~ 151 (254)
T 2h00_A 133 LKEESEIIYDFCMCNPPFF 151 (254)
T ss_dssp STTCCSCCBSEEEECCCCC
T ss_pred hhcccCCcccEEEECCCCc
Confidence 332 5899999975443
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.55 E-value=8e-14 Score=98.34 Aligned_cols=101 Identities=11% Similarity=0.026 Sum_probs=81.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-CCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LPI- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~- 79 (131)
+|||+| |+|.++..++.... ..+++++|+++.+++.++++.+..++. +++++..|+.+ ++.
T Consensus 175 ~VLDlG-G~G~~~~~la~~~~-----------~~~v~~vDi~~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~l~~~ 237 (373)
T 2qm3_A 175 DIFVLG-DDDLTSIALMLSGL-----------PKRIAVLDIDERLTKFIEKAANEIGYE-----DIEIFTFDLRKPLPDY 237 (373)
T ss_dssp EEEEES-CTTCHHHHHHHHTC-----------CSEEEEECSCHHHHHHHHHHHHHHTCC-----CEEEECCCTTSCCCTT
T ss_pred EEEEEC-CCCHHHHHHHHhCC-----------CCEEEEEECCHHHHHHHHHHHHHcCCC-----CEEEEEChhhhhchhh
Confidence 699999 99999998876532 468999999999999999999877653 79999999887 553
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|+++..++.. ....++.++.+.|+|||++++.+
T Consensus 238 ~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 238 ALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp TSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred ccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEE
Confidence 34689999998655433 25788999999999999543333
No 209
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.55 E-value=1.1e-14 Score=100.67 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=77.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++.. ++.+ ++++++..|..+. +
T Consensus 111 ~VLdIG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~---~rv~~~~~D~~~~l~ 176 (314)
T 2b2c_A 111 RVLIIGGGDGGILREVLKHES-----------VEKVTMCEIDEMVIDVAKKFLPGMSCGFSH---PKLDLFCGDGFEFLK 176 (314)
T ss_dssp EEEEESCTTSHHHHHHTTCTT-----------CCEEEEECSCHHHHHHHHHHCTTTSGGGGC---TTEEEECSCHHHHHH
T ss_pred EEEEEcCCcCHHHHHHHHcCC-----------CCEEEEEECCHHHHHHHHHHHHHhccccCC---CCEEEEEChHHHHHH
Confidence 699999999999999987643 679999999999999999988643 2211 3899999997653 2
Q ss_pred CCCCCeeEEEEccccccccC--H--HHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTR--I--DKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~--~--~~~l~~~~~~L~p~G~l~~~ 119 (131)
...++||+|++....+..+. . ..++.++.+.|+|||++++.
T Consensus 177 ~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 177 NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 34578999998654322221 1 68899999999999999874
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.54 E-value=1.6e-14 Score=99.45 Aligned_cols=105 Identities=11% Similarity=0.082 Sum_probs=78.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh--ccCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD--LFKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++. .++.+ ++++++..|..+. +
T Consensus 98 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~---~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 98 KVLIIGGGDGGVLREVVKHPS-----------VESVVQCEIDEDVIQVSKKFLPGMAIGYSS---SKLTLHVGDGFEFMK 163 (304)
T ss_dssp EEEEEECTTSHHHHHHTTCTT-----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGC---TTEEEEESCHHHHHH
T ss_pred EEEEECCCchHHHHHHHHcCC-----------CCEEEEEECCHHHHHHHHHHhHHhhcccCC---CcEEEEECcHHHHHh
Confidence 699999999999999987642 57899999999999999998764 22211 2899999997653 3
Q ss_pred CCCCCeeEEEEcccccccc----CHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVT----RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~----~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...++||+|++....+..+ ....++.++.+.|+|||++++..
T Consensus 164 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 164 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 3457899999865433222 12468999999999999998754
No 211
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.54 E-value=2e-14 Score=100.06 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=81.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 79 (131)
+|||+|||+|.++..++.. +.+++++|+|+.+++.+++++...++.+ .+++++..|+.+...
T Consensus 156 ~VLDlgcGtG~~sl~la~~-------------ga~V~~VD~s~~al~~a~~n~~~~gl~~---~~v~~i~~D~~~~l~~~ 219 (332)
T 2igt_A 156 KVLNLFGYTGVASLVAAAA-------------GAEVTHVDASKKAIGWAKENQVLAGLEQ---APIRWICEDAMKFIQRE 219 (332)
T ss_dssp EEEEETCTTCHHHHHHHHT-------------TCEEEEECSCHHHHHHHHHHHHHHTCTT---SCEEEECSCHHHHHHHH
T ss_pred cEEEcccccCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECcHHHHHHHH
Confidence 6999999999999988874 3499999999999999999998776542 148999999876431
Q ss_pred --CCCCeeEEEEccc----------cccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 --ESDSYSAYTIAFG----------IRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 --~~~~~D~i~~~~~----------l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..++||+|++... ++...+...++..+.++|+|||++++..
T Consensus 220 ~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 220 ERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred HhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 1468999999432 1233456788999999999999976644
No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.54 E-value=3.5e-14 Score=97.42 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=78.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh--ccCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD--LFKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++.. ....+ ++++++..|..+. +
T Consensus 93 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~~~~a~~~~~~~~~~~~~---~~v~~~~~D~~~~l~ 158 (296)
T 1inl_A 93 KVLIIGGGDGGTLREVLKHDS-----------VEKAILCEVDGLVIEAARKYLKQTSCGFDD---PRAEIVIANGAEYVR 158 (296)
T ss_dssp EEEEEECTTCHHHHHHTTSTT-----------CSEEEEEESCHHHHHHHHHHCHHHHGGGGC---TTEEEEESCHHHHGG
T ss_pred EEEEEcCCcCHHHHHHHhcCC-----------CCEEEEEECCHHHHHHHHHHhHhhccccCC---CceEEEECcHHHHHh
Confidence 699999999999999987643 57999999999999999998754 22211 2899999997653 3
Q ss_pred CCCCCeeEEEEcccccccc-----CHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVT-----RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~-----~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...++||+|++....++.. ....++.++.+.|+|||++++..
T Consensus 159 ~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 159 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 3356899999854322121 22688999999999999998753
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.54 E-value=2.2e-14 Score=99.44 Aligned_cols=105 Identities=13% Similarity=0.195 Sum_probs=80.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh--ccCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD--LFKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++. .+..+ ++++++..|..+. +
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDis~~~l~~ar~~~~~~~~~~~~---~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKS-----------VENIDICEIDETVIEVSKIYFKNISCGYED---KRVNVFIEDASKFLE 184 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTT-----------CCEEEEEESCHHHHHHHHHHCTTTSGGGGS---TTEEEEESCHHHHHH
T ss_pred EEEEEcCCccHHHHHHHHcCC-----------CCEEEEEECCHHHHHHHHHHHHhhccccCC---CcEEEEEccHHHHHh
Confidence 699999999999999887643 57999999999999999998765 22211 2899999997653 2
Q ss_pred CCCCCeeEEEEccccccc--cCH--HHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNV--TRI--DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~--~~~--~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...++||+|++...-... ... ..++.++.+.|+|||++++..
T Consensus 185 ~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 185 NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 235689999986532211 122 688999999999999998753
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.54 E-value=3.4e-14 Score=96.52 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=80.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++.. ...+ ++++++..|..+. +
T Consensus 78 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vEid~~~v~~ar~~~~~~~~~~~~---~rv~v~~~D~~~~l~ 143 (275)
T 1iy9_A 78 HVLVVGGGDGGVIREILKHPS-----------VKKATLVDIDGKVIEYSKKFLPSIAGKLDD---PRVDVQVDDGFMHIA 143 (275)
T ss_dssp EEEEESCTTCHHHHHHTTCTT-----------CSEEEEEESCHHHHHHHHHHCHHHHTTTTS---TTEEEEESCSHHHHH
T ss_pred EEEEECCchHHHHHHHHhCCC-----------CceEEEEECCHHHHHHHHHHhHhhccccCC---CceEEEECcHHHHHh
Confidence 699999999999998887632 579999999999999999987542 2222 3899999997653 3
Q ss_pred CCCCCeeEEEEccccccccC----HHHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTR----IDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~----~~~~l~~~~~~L~p~G~l~~~ 119 (131)
...++||+|++....+..+. ...++.++++.|+|||++++.
T Consensus 144 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 144 KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 33578999999654332221 267899999999999999875
No 215
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.52 E-value=1.8e-14 Score=98.35 Aligned_cols=93 Identities=17% Similarity=0.130 Sum_probs=68.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCcee-EEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLR-FLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~-- 78 (131)
++||+|||||.++..+++. +..+|+++|+|++|+..+.++-+ ++. +...++..+.
T Consensus 88 ~vLDiGcGTG~~t~~L~~~------------ga~~V~aVDvs~~mL~~a~r~~~----------rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 88 ITIDIGASTGGFTDVMLQN------------GAKLVYAVDVGTNQLVWKLRQDD----------RVRSMEQYNFRYAEPV 145 (291)
T ss_dssp EEEEETCTTSHHHHHHHHT------------TCSEEEEECSSSSCSCHHHHTCT----------TEEEECSCCGGGCCGG
T ss_pred EEEecCCCccHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHhCc----------ccceecccCceecchh
Confidence 6899999999999888775 24689999999999988543211 222 2223333322
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++..+||+|++..+++++ ..++.++.++|+|||++++.
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEE
Confidence 334459999998777644 77899999999999999887
No 216
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.51 E-value=4.9e-14 Score=96.10 Aligned_cols=105 Identities=13% Similarity=0.217 Sum_probs=80.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc--CCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF--KVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++... ..+ ++++++..|..+. +
T Consensus 81 ~VLdiG~G~G~~~~~l~~~~~-----------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~---~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 81 NVLVVGGGDGGIIRELCKYKS-----------VENIDICEIDETVIEVSKIYFKNISCGYED---KRVNVFIEDASKFLE 146 (283)
T ss_dssp EEEEEECTTSHHHHHHTTCTT-----------CCEEEEEESCHHHHHHHHHHCTTTSGGGGS---TTEEEEESCHHHHHH
T ss_pred eEEEEeCCcCHHHHHHHHcCC-----------CCEEEEEECCHHHHHHHHHHhHHhccccCC---CcEEEEECChHHHHH
Confidence 699999999999999987642 5799999999999999999876431 111 3899999997663 2
Q ss_pred CCCCCeeEEEEcccccccc--CH--HHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVT--RI--DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~--~~--~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...++||+|++....+..+ .. ..++..+++.|+|||++++..
T Consensus 147 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 147 NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 2357899999965433222 22 689999999999999998753
No 217
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.51 E-value=1.5e-13 Score=99.72 Aligned_cols=107 Identities=9% Similarity=0.150 Sum_probs=84.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-E 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~ 80 (131)
+|||+|||+|..+..+++..+ ...+++++|+++.+++.++++++..+.. ++.++..|...++. .
T Consensus 120 ~VLDl~aGpG~kt~~lA~~~~----------~~g~V~avDis~~~l~~~~~n~~r~g~~-----nv~~~~~D~~~~~~~~ 184 (479)
T 2frx_A 120 RVMDVAAAPGSKTTQISARMN----------NEGAILANEFSASRVKVLHANISRCGIS-----NVALTHFDGRVFGAAV 184 (479)
T ss_dssp EEEESSCTTSHHHHHHHHHTT----------TCSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEEECCCSTTHHHHS
T ss_pred EEEEeCCCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCCHHHhhhhc
Confidence 699999999999999998864 3578999999999999999999887754 78999999877643 3
Q ss_pred CCCeeEEEEccc------cccccC----------------HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFG------IRNVTR----------------IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~------l~~~~~----------------~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
.++||+|++... +...++ ...+|.++.++|||||++++..++.
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 568999998321 221111 2467899999999999999876654
No 218
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.49 E-value=7e-14 Score=90.00 Aligned_cols=107 Identities=18% Similarity=0.153 Sum_probs=73.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEE-ecccccCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL-EANAEELP- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~- 78 (131)
.+|||+|||+|.++..+++..+... .....+..+++++|+++.. .. .+++++ ..|+....
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~--~~~~~~~~~v~~vD~s~~~-----------~~-----~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAG--TDPSSPVGFVLGVDLLHIF-----------PL-----EGATFLCPADVTDPRT 85 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTC--CCTTSCCCEEEEECSSCCC-----------CC-----TTCEEECSCCTTSHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhcccc--ccccCCCceEEEEechhcc-----------cC-----CCCeEEEeccCCCHHH
Confidence 3699999999999999998864100 0000012789999999831 11 167888 88866532
Q ss_pred -------CCCCCeeEEEEcccccc----ccCH-------HHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 79 -------IESDSYSAYTIAFGIRN----VTRI-------DKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 79 -------~~~~~~D~i~~~~~l~~----~~~~-------~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
++.++||+|++...++. ..+. ...+.++.++|+|||++++..+....
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 23458999999665443 2222 47899999999999999988765543
No 219
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.49 E-value=6.3e-14 Score=95.45 Aligned_cols=101 Identities=11% Similarity=0.068 Sum_probs=78.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cC-------CCCCCCceeEEec
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FK-------VPVPNPRLRFLEA 72 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~ 72 (131)
+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++ .. ++ .+ ++++++..
T Consensus 78 ~VLdiG~G~G~~~~~l~~~-~-----------~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~---~~v~~~~~ 141 (281)
T 1mjf_A 78 RVLVIGGGDGGTVREVLQH-D-----------VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKH---EKAKLTIG 141 (281)
T ss_dssp EEEEEECTTSHHHHHHTTS-C-----------CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCC---SSEEEEES
T ss_pred eEEEEcCCcCHHHHHHHhC-C-----------CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCC---CcEEEEEC
Confidence 6999999999999998886 4 579999999999999999987 32 21 11 38999999
Q ss_pred ccccC-CCCCCCeeEEEEcccccccc--C--HHHHHHHHHHhccCCcEEEEE
Q psy890 73 NAEEL-PIESDSYSAYTIAFGIRNVT--R--IDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 73 d~~~~-~~~~~~~D~i~~~~~l~~~~--~--~~~~l~~~~~~L~p~G~l~~~ 119 (131)
|..+. +. .++||+|++....+..+ . ...++.++.+.|+|||++++.
T Consensus 142 D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 142 DGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred chHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 97553 22 56899999865533221 1 267899999999999999875
No 220
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.49 E-value=5.7e-14 Score=99.78 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=85.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 79 (131)
+|||+|||+|.++..++.. +..+++++|+|+.+++.+++++...+..+ +++++..|+.+...
T Consensus 220 ~VLDl~~G~G~~~~~la~~------------g~~~v~~vD~s~~~l~~a~~n~~~n~~~~----~v~~~~~d~~~~~~~~ 283 (396)
T 2as0_A 220 RVLDVFTYTGGFAIHAAIA------------GADEVIGIDKSPRAIETAKENAKLNGVED----RMKFIVGSAFEEMEKL 283 (396)
T ss_dssp EEEETTCTTTHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCGG----GEEEEESCHHHHHHHH
T ss_pred eEEEecCCCCHHHHHHHHC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCc----cceEEECCHHHHHHHH
Confidence 6899999999999998875 24589999999999999999998877653 79999999776421
Q ss_pred --CCCCeeEEEEcccc---------ccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 --ESDSYSAYTIAFGI---------RNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 --~~~~~D~i~~~~~l---------~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
...+||+|++.... +...+....+.++.+.|+|||++++..++..
T Consensus 284 ~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 284 QKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp HHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 25689999995322 1123467788999999999999988876654
No 221
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.48 E-value=3.1e-13 Score=91.82 Aligned_cols=100 Identities=9% Similarity=0.108 Sum_probs=82.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++++.+++.+ +++++..|..++. ..
T Consensus 128 ~VlD~~aG~G~~~i~~a~~------------g~~~V~avD~np~a~~~~~~N~~~N~v~~----~v~~~~~D~~~~~-~~ 190 (278)
T 3k6r_A 128 LVVDMFAGIGHLSLPIAVY------------GKAKVIAIEKDPYTFKFLVENIHLNKVED----RMSAYNMDNRDFP-GE 190 (278)
T ss_dssp EEEETTCTTTTTTHHHHHH------------TCCEEEEECCCHHHHHHHHHHHHHTTCTT----TEEEECSCTTTCC-CC
T ss_pred EEEEecCcCcHHHHHHHHh------------cCCeEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEeCcHHHhc-cc
Confidence 6899999999999988876 25689999999999999999999988875 8999999988764 34
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
..||.|+++... ....++..+.+.|++||.+.+.++.
T Consensus 191 ~~~D~Vi~~~p~----~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 191 NIADRILMGYVV----RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp SCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCEEEECCCC----cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 679999886432 2345677788999999998776544
No 222
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=4e-14 Score=89.95 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=64.2
Q ss_pred EeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC---CCCCeeEEEEccccccc-cCHHHHHHHHHHhccCCcE
Q psy890 40 ADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI---ESDSYSAYTIAFGIRNV-TRIDKALSEAYRVLKPGGR 115 (131)
Q Consensus 40 ~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~D~i~~~~~l~~~-~~~~~~l~~~~~~L~p~G~ 115 (131)
+|+|+.|++.++++... ++++...|+.++++ +.++||+|++.++++++ ++....+.++++.|||||+
T Consensus 26 vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGC 96 (176)
T ss_dssp HHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEE
T ss_pred eeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEE
Confidence 89999999999988642 57889999988776 67899999999999999 8999999999999999999
Q ss_pred EEEEe
Q psy890 116 FLCLE 120 (131)
Q Consensus 116 l~~~~ 120 (131)
+++.+
T Consensus 97 l~~~~ 101 (176)
T 2ld4_A 97 LFLKE 101 (176)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99854
No 223
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.48 E-value=7.4e-14 Score=98.79 Aligned_cols=105 Identities=23% Similarity=0.180 Sum_probs=84.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 79 (131)
+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++...+.. +++++..|+.+...
T Consensus 212 ~VLDlg~G~G~~~~~la~~-------------~~~v~~vD~s~~~~~~a~~n~~~n~~~-----~~~~~~~d~~~~~~~~ 273 (382)
T 1wxx_A 212 RALDVFSYAGGFALHLALG-------------FREVVAVDSSAEALRRAEENARLNGLG-----NVRVLEANAFDLLRRL 273 (382)
T ss_dssp EEEEETCTTTHHHHHHHHH-------------EEEEEEEESCHHHHHHHHHHHHHTTCT-----TEEEEESCHHHHHHHH
T ss_pred eEEEeeeccCHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----CceEEECCHHHHHHHH
Confidence 6899999999999999886 358999999999999999999887754 68999999876521
Q ss_pred --CCCCeeEEEEccccc---------cccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 --ESDSYSAYTIAFGIR---------NVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 --~~~~~D~i~~~~~l~---------~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
...+||+|++..... .......++.++.+.|+|||++++...+..
T Consensus 274 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 274 EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 256899999853221 113456788999999999999998876644
No 224
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.47 E-value=1.7e-13 Score=97.30 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=85.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC-CCCCCCceeEEecccccCCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK-VPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~- 79 (131)
+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++...+. .+ +++++..|+.+...
T Consensus 223 ~VLDl~cG~G~~sl~la~~------------g~~~V~~vD~s~~al~~a~~n~~~ngl~~~----~v~~~~~D~~~~~~~ 286 (396)
T 3c0k_A 223 RVLNCFSYTGGFAVSALMG------------GCSQVVSVDTSQEALDIARQNVELNKLDLS----KAEFVRDDVFKLLRT 286 (396)
T ss_dssp EEEEESCTTCSHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCGG----GEEEEESCHHHHHHH
T ss_pred eEEEeeccCCHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcc----ceEEEECCHHHHHHH
Confidence 6899999999999998875 245899999999999999999988775 43 78999999776521
Q ss_pred ---CCCCeeEEEEcccc---------ccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 ---ESDSYSAYTIAFGI---------RNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 ---~~~~~D~i~~~~~l---------~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
...+||+|++.... .........+.++.+.|+|||++++...+..
T Consensus 287 ~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 287 YRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp HHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 14689999996322 1224567889999999999999998765543
No 225
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=3.7e-13 Score=93.78 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=81.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++.. ++ + ..+++++|+|+.+++.+++++...++.+ +++++..|..+..
T Consensus 198 ~VLDlg~G~G~~~l~-a~--~-----------~~~V~~vD~s~~ai~~a~~n~~~n~l~~----~v~~~~~D~~~~~--- 256 (336)
T 2yx1_A 198 VVVDMFAGVGPFSIA-CK--N-----------AKKIYAIDINPHAIELLKKNIKLNKLEH----KIIPILSDVREVD--- 256 (336)
T ss_dssp EEEETTCTTSHHHHH-TT--T-----------SSEEEEEESCHHHHHHHHHHHHHTTCTT----TEEEEESCGGGCC---
T ss_pred EEEEccCccCHHHHh-cc--C-----------CCEEEEEECCHHHHHHHHHHHHHcCCCC----cEEEEECChHHhc---
Confidence 689999999999988 66 2 5789999999999999999998887653 7999999988765
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.+||+|++...- ....++..+.+.|+|||.+++.+++..
T Consensus 257 ~~fD~Vi~dpP~----~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 VKGNRVIMNLPK----FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CCEEEEEECCTT----TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CCCcEEEECCcH----hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 789999985321 123678889999999999998877654
No 226
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=3.7e-13 Score=95.01 Aligned_cols=103 Identities=17% Similarity=0.075 Sum_probs=80.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
..|||+|||+|.++..++.... ..+++++|+|+.+++.++++....++.+ ++++...|+.+++.+
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~-----------~~~v~g~Dis~~~l~~A~~n~~~~gl~~----~i~~~~~D~~~~~~~ 283 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRY-----------SGEIIGIEKYRKHLIGAEMNALAAGVLD----KIKFIQGDATQLSQY 283 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTC-----------CSCEEEEESCHHHHHHHHHHHHHTTCGG----GCEEEECCGGGGGGT
T ss_pred CEEEEccCcCcHHHHHHHHhCC-----------CCeEEEEeCCHHHHHHHHHHHHHcCCCC----ceEEEECChhhCCcc
Confidence 3689999999999998887632 3489999999999999999998887654 899999999998877
Q ss_pred CCCeeEEEEcccccc-------ccC-HHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRN-------VTR-IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~-------~~~-~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.++||+|+++..... ..+ ...++.++.+.| +|.++++.
T Consensus 284 ~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 284 VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 788999999654321 112 256778888888 45544443
No 227
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.46 E-value=4.1e-13 Score=96.32 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=84.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
.+|||+|||+|..+..+++..+ ..+++++|+++.++..+++++...+. ++.++..|....+
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~-----------~~~v~a~D~~~~~l~~~~~~~~~~g~------~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAP-----------EAQVVAVDIDEQRLSRVYDNLKRLGM------KATVKQGDGRYPSQW 310 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-----------TCEEEEEESSTTTHHHHHHHHHHTTC------CCEEEECCTTCTHHH
T ss_pred CeEEEECCCchHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHHHHHcCC------CeEEEeCchhhchhh
Confidence 3699999999999999998854 47899999999999999999887653 4688888887764
Q ss_pred CCCCCeeEEEEccc------cccccCH----------------HHHHHHHHHhccCCcEEEEEeccCC
Q psy890 79 IESDSYSAYTIAFG------IRNVTRI----------------DKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 79 ~~~~~~D~i~~~~~------l~~~~~~----------------~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
++.++||+|++... ++..++. ..++.++.++|||||++++..++..
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 44578999997322 2222221 4779999999999999999876643
No 228
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.46 E-value=2.8e-13 Score=102.22 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=84.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~ 80 (131)
+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++..+++.. .+++++..|..+. +..
T Consensus 542 ~VLDlg~GtG~~sl~aa~~------------ga~~V~aVD~s~~al~~a~~N~~~ngl~~---~~v~~i~~D~~~~l~~~ 606 (703)
T 3v97_A 542 DFLNLFSYTGSATVHAGLG------------GARSTTTVDMSRTYLEWAERNLRLNGLTG---RAHRLIQADCLAWLREA 606 (703)
T ss_dssp EEEEESCTTCHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCS---TTEEEEESCHHHHHHHC
T ss_pred cEEEeeechhHHHHHHHHC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCc---cceEEEecCHHHHHHhc
Confidence 6999999999999988774 24579999999999999999998887652 1799999998763 334
Q ss_pred CCCeeEEEEccc-----------cccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 81 SDSYSAYTIAFG-----------IRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~-----------l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
.++||+|++... +....+...++..+.++|+|||++++...+
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 578999998542 223345678899999999999999876544
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.46 E-value=1.7e-13 Score=93.46 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=73.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.++..++++....+..+ +++++..|+.+.+++
T Consensus 31 ~VLDiG~G~G~lt~~L~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~----~v~~~~~D~~~~~~~- 92 (285)
T 1zq9_A 31 VVLEVGPGTGNMTVKLLEK-------------AKKVVACELDPRLVAELHKRVQGTPVAS----KLQVLVGDVLKTDLP- 92 (285)
T ss_dssp EEEEECCTTSTTHHHHHHH-------------SSEEEEEESCHHHHHHHHHHHTTSTTGG----GEEEEESCTTTSCCC-
T ss_pred EEEEEcCcccHHHHHHHhh-------------CCEEEEEECCHHHHHHHHHHHHhcCCCC----ceEEEEcceecccch-
Confidence 6899999999999999886 4589999999999999999886544322 799999999877654
Q ss_pred CCeeEEEEccccccccCHH-HHHH--------------HH--HHhccCCcEEE
Q psy890 82 DSYSAYTIAFGIRNVTRID-KALS--------------EA--YRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~-~~l~--------------~~--~~~L~p~G~l~ 117 (131)
+||+|+++...++..... ..+. ++ ++.++|||.++
T Consensus 93 -~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 -FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 799999976665543322 2221 11 35789999653
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.46 E-value=1.8e-13 Score=96.93 Aligned_cols=108 Identities=9% Similarity=0.043 Sum_probs=82.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 79 (131)
+|||+|||+|.++..++.. ...+++++|+|+.+++.++++.+..++.+ .+++++..|+.+. + .
T Consensus 215 ~VLDl~cGtG~~sl~la~~------------ga~~V~~vD~s~~al~~A~~N~~~n~~~~---~~v~~~~~D~~~~l~~~ 279 (385)
T 2b78_A 215 TVLNLFSYTAAFSVAAAMG------------GAMATTSVDLAKRSRALSLAHFEANHLDM---ANHQLVVMDVFDYFKYA 279 (385)
T ss_dssp EEEEETCTTTHHHHHHHHT------------TBSEEEEEESCTTHHHHHHHHHHHTTCCC---TTEEEEESCHHHHHHHH
T ss_pred eEEEEeeccCHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECCHHHHHHHH
Confidence 6899999999999998874 13589999999999999999998876542 1689999997663 2 1
Q ss_pred --CCCCeeEEEEcccc-----cccc----CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 --ESDSYSAYTIAFGI-----RNVT----RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 --~~~~~D~i~~~~~l-----~~~~----~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
...+||+|++.... .... ....++..+.+.|+|||++++...+..
T Consensus 280 ~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 280 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 24589999984332 1222 345567888999999999988765543
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.45 E-value=2.8e-13 Score=97.79 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=83.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
++|||+|||+|..+..++...+ ...+++++|+++.+++.++++++..+. .+.++..|...++ .
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~----------~~g~V~AvDis~~~l~~a~~n~~r~G~------~v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMG----------GKGLLLANEVDGKRVRGLLENVERWGA------PLAVTQAPPRALAEA 166 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTT----------TCSEEEEECSCHHHHHHHHHHHHHHCC------CCEEECSCHHHHHHH
T ss_pred CEEEEEcCCcCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHcCC------eEEEEECCHHHhhhh
Confidence 3699999999999999998865 346899999999999999999987763 3778888877654 2
Q ss_pred CCCCeeEEEEcccc------ccccC----------------HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 ESDSYSAYTIAFGI------RNVTR----------------IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ~~~~~D~i~~~~~l------~~~~~----------------~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
..++||+|++.... +.-++ ...++.++.++|||||+++...++.
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 35789999973221 11121 1678999999999999999876654
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.45 E-value=1.2e-13 Score=93.18 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=76.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|..+..+++. + .+++++|+++.+++.++++++.. ...+ ++++++..|..+..
T Consensus 75 ~VL~iG~G~G~~~~~ll~~------------~-~~v~~veid~~~i~~ar~~~~~~~~~~~~---~rv~~~~~D~~~~~- 137 (262)
T 2cmg_A 75 EVLIVDGFDLELAHQLFKY------------D-THIDFVQADEKILDSFISFFPHFHEVKNN---KNFTHAKQLLDLDI- 137 (262)
T ss_dssp EEEEESSCCHHHHHHHTTS------------S-CEEEEECSCHHHHGGGTTTSTTHHHHHTC---TTEEEESSGGGSCC-
T ss_pred EEEEEeCCcCHHHHHHHhC------------C-CEEEEEECCHHHHHHHHHHHHhhccccCC---CeEEEEechHHHHH-
Confidence 6999999999999888776 3 58999999999999998876531 1221 38999999987754
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++||+|++. ..++..++..+++.|+|||++++.
T Consensus 138 --~~fD~Ii~d-----~~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 --KKYDLIFCL-----QEPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp --CCEEEEEES-----SCCCHHHHHHHHTTEEEEEEEEEE
T ss_pred --hhCCEEEEC-----CCChHHHHHHHHHhcCCCcEEEEE
Confidence 789999986 235556899999999999999875
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=5.1e-13 Score=94.81 Aligned_cols=105 Identities=16% Similarity=0.035 Sum_probs=79.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-IE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 80 (131)
+|||+|||+|.++..++.. +.+++++|+|+.+++.+++++...+.. .++...|+.+.. ..
T Consensus 217 ~VLDlg~GtG~~sl~~a~~-------------ga~V~avDis~~al~~a~~n~~~ng~~------~~~~~~D~~~~l~~~ 277 (393)
T 4dmg_A 217 RVLDVYSYVGGFALRAARK-------------GAYALAVDKDLEALGVLDQAALRLGLR------VDIRHGEALPTLRGL 277 (393)
T ss_dssp EEEEESCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTCC------CEEEESCHHHHHHTC
T ss_pred eEEEcccchhHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHHHHHhCCC------CcEEEccHHHHHHHh
Confidence 6999999999999999875 345999999999999999999887653 245588876642 11
Q ss_pred CCCeeEEEEcccc-c--------cccCHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 81 SDSYSAYTIAFGI-R--------NVTRIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 81 ~~~~D~i~~~~~l-~--------~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.+.||+|++.... . ...+...++..+.++|+|||+++++.++...
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~ 331 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL 331 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 2349999986432 1 1124467888999999999999987776543
No 234
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.44 E-value=3.6e-13 Score=97.07 Aligned_cols=108 Identities=12% Similarity=0.057 Sum_probs=85.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
++|||+|||+|..+..++...+ ...+++++|+++.+++.++++++..+.. ++.++..|...++ .
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~----------~~g~V~AvDis~~rl~~~~~n~~r~g~~-----nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMK----------GKGLLVTNEIFPKRAKILSENIERWGVS-----NAIVTNHAPAELVPH 171 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHT----------TCSEEEEECSSHHHHHHHHHHHHHHTCS-----SEEEECCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHcC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEeCCHHHhhhh
Confidence 3699999999999999998875 3578999999999999999999887765 7899999977654 2
Q ss_pred CCCCeeEEEEcccccc------ccC----------------HHHHHHHHHHhccCCcEEEEEeccC
Q psy890 80 ESDSYSAYTIAFGIRN------VTR----------------IDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~------~~~----------------~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
..++||+|++...+.. -++ ...+|.++.++|||||+++...++.
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 3478999998543211 111 1277899999999999998876654
No 235
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.42 E-value=2.2e-12 Score=83.36 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=66.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. + ..+++++|+|+.+++.++++.. +++++..|+.+++
T Consensus 54 ~vlD~gcG~G~~~~~l~~~-~-----------~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~~~--- 108 (200)
T 1ne2_A 54 SVIDAGTGNGILACGSYLL-G-----------AESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSEIS--- 108 (200)
T ss_dssp EEEEETCTTCHHHHHHHHT-T-----------BSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGGCC---
T ss_pred EEEEEeCCccHHHHHHHHc-C-----------CCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHHCC---
Confidence 6999999999999988775 2 4579999999999999998864 4788999988764
Q ss_pred CCeeEEEEccccccccC--HHHHHHHHHHhc
Q psy890 82 DSYSAYTIAFGIRNVTR--IDKALSEAYRVL 110 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L 110 (131)
++||+|+++..+++..+ ...++.++.+.+
T Consensus 109 ~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 68999999988887754 346788888888
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.42 E-value=1.8e-12 Score=90.45 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=81.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++...... + ...+++|+|+++.++..++.+....+. ++.++..|.... ...
T Consensus 133 ~VlDp~cGsG~~l~~~~~~~~~~~--~----~~~~v~GiDi~~~~~~~a~~n~~~~g~------~~~i~~~D~l~~-~~~ 199 (344)
T 2f8l_A 133 SILDPACGTANLLTTVINQLELKG--D----VDVHASGVDVDDLLISLALVGADLQRQ------KMTLLHQDGLAN-LLV 199 (344)
T ss_dssp EEEETTCTTSHHHHHHHHHHHTTS--S----CEEEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCTTSC-CCC
T ss_pred EEEeCCCCccHHHHHHHHHHHHhc--C----CCceEEEEECCHHHHHHHHHHHHhCCC------CceEEECCCCCc-ccc
Confidence 689999999999999988875110 0 126899999999999999998876553 577888886553 235
Q ss_pred CCeeEEEEccccccccCH------------------HHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRI------------------DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~------------------~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+||+|+++..+.+++.. ..++.++.+.|+|||+++++.
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 689999998776544321 257999999999999988875
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=8.6e-13 Score=85.16 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=70.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 79 (131)
++|||+|||+|.++..+++. ..+++++|+++.. .. +++.++..|+.+.+.
T Consensus 27 ~~VLDlG~G~G~~s~~la~~-------------~~~V~gvD~~~~~-----------~~-----~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL-------------ARKIISIDLQEME-----------EI-----AGVRFIRCDIFKETIF 77 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT-------------CSEEEEEESSCCC-----------CC-----TTCEEEECCTTSSSHH
T ss_pred CEEEEEeecCCHHHHHHHHc-------------CCcEEEEeccccc-----------cC-----CCeEEEEccccCHHHH
Confidence 47999999999999988876 4689999998731 11 279999999887541
Q ss_pred -------C---CCCeeEEEEcccccccc-----------CHHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 80 -------E---SDSYSAYTIAFGIRNVT-----------RIDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 80 -------~---~~~~D~i~~~~~l~~~~-----------~~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
. .++||+|++........ ....++..+.++|+|||.+++..+..+.
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 1 14899999965432111 1356788899999999999987665543
No 238
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.40 E-value=3.7e-13 Score=89.38 Aligned_cols=97 Identities=18% Similarity=0.137 Sum_probs=62.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. + ..+++++|+|++|+..++++.+...... ..++.+.. .... ..
T Consensus 40 ~VLDiGcGtG~~t~~la~~-g-----------~~~V~gvDis~~ml~~a~~~~~~~~~~~--~~~~~~~~--~~~~--~~ 101 (232)
T 3opn_A 40 TCLDIGSSTGGFTDVMLQN-G-----------AKLVYALDVGTNQLAWKIRSDERVVVME--QFNFRNAV--LADF--EQ 101 (232)
T ss_dssp EEEEETCTTSHHHHHHHHT-T-----------CSEEEEECSSCCCCCHHHHTCTTEEEEC--SCCGGGCC--GGGC--CS
T ss_pred EEEEEccCCCHHHHHHHhc-C-----------CCEEEEEcCCHHHHHHHHHhCccccccc--cceEEEeC--HhHc--Cc
Confidence 6999999999999988876 1 3589999999999998776543211000 00222222 1111 11
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..+|.+.+..++.++ ..++.+++++|||||++++.
T Consensus 102 ~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 102 GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEE
Confidence 123444444333333 67899999999999999886
No 239
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=1.4e-11 Score=79.96 Aligned_cols=88 Identities=10% Similarity=0.106 Sum_probs=71.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. + ..+++++|+++.+++.++++....+. ++.++..|+.+++
T Consensus 52 ~vlD~g~G~G~~~~~l~~~-~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~--- 110 (207)
T 1wy7_A 52 VVADLGAGTGVLSYGALLL-G-----------AKEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDVSEFN--- 110 (207)
T ss_dssp EEEEETCTTCHHHHHHHHT-T-----------CSEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCGGGCC---
T ss_pred EEEEeeCCCCHHHHHHHHc-C-----------CCEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECchHHcC---
Confidence 6899999999999988775 1 35799999999999999999876552 6889999988864
Q ss_pred CCeeEEEEcccccccc--CHHHHHHHHHHhc
Q psy890 82 DSYSAYTIAFGIRNVT--RIDKALSEAYRVL 110 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L 110 (131)
.+||+|+++..++... .....+.++.+.+
T Consensus 111 ~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 4799999987766654 3456788888887
No 240
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.37 E-value=1.9e-13 Score=92.87 Aligned_cols=99 Identities=11% Similarity=0.035 Sum_probs=69.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhh-hccCCCCCCCceeEE--ecccccCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR-DLFKVPVPNPRLRFL--EANAEELP 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~d~~~~~ 78 (131)
+|||+|||+|.++..+++. .+|+++|+++ +...++++.. ..... .++.++ ..|+..++
T Consensus 85 ~VLDlGcGtG~~s~~la~~--------------~~V~gVD~s~-m~~~a~~~~~~~~~~~----~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 85 TVVDLGCGRGSWSYYAASQ--------------PNVREVKAYT-LGTSGHEKPRLVETFG----WNLITFKSKVDVTKME 145 (276)
T ss_dssp EEEEESCTTCHHHHHHHTS--------------TTEEEEEEEC-CCCTTSCCCCCCCCTT----GGGEEEECSCCGGGCC
T ss_pred EEEEeccCCCHHHHHHHHc--------------CCEEEEECch-hhhhhhhchhhhhhcC----CCeEEEeccCcHhhCC
Confidence 6999999999999888764 3699999998 5332221110 00001 157888 88988765
Q ss_pred CCCCCeeEEEEccccccccCH----H---HHHHHHHHhccCCc--EEEEEecc
Q psy890 79 IESDSYSAYTIAFGIRNVTRI----D---KALSEAYRVLKPGG--RFLCLEFS 122 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~----~---~~l~~~~~~L~p~G--~l~~~~~~ 122 (131)
.++||+|++..+ +...+. . .++..+.++|+||| .+++..+.
T Consensus 146 --~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 --PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp --CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred --CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 333221 1 36888999999999 88886665
No 241
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.37 E-value=3.2e-12 Score=85.64 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=82.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|-++..++...+ ..+|+++|+++.+++.+++++...++ ..++...|....+ +.
T Consensus 135 ~VLDLGCG~GpLAl~~~~~~p-----------~a~y~a~DId~~~le~a~~~l~~~g~------~~~~~v~D~~~~~-p~ 196 (281)
T 3lcv_B 135 TLRDLACGLNPLAAPWMGLPA-----------ETVYIASDIDARLVGFVDEALTRLNV------PHRTNVADLLEDR-LD 196 (281)
T ss_dssp EEEETTCTTGGGCCTTTTCCT-----------TCEEEEEESBHHHHHHHHHHHHHTTC------CEEEEECCTTTSC-CC
T ss_pred eeeeeccCccHHHHHHHhhCC-----------CCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeeecccC-CC
Confidence 699999999999988877543 78999999999999999999987663 5777788866543 45
Q ss_pred CCeeEEEEccccccccCH--HHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRI--DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+||+++++-.++++++- ...+ ++...|+|+|+++-.+
T Consensus 197 ~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 197 EPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp SCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred CCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 779999999999998643 3444 8999999999987654
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.32 E-value=1.5e-11 Score=81.55 Aligned_cols=98 Identities=14% Similarity=-0.025 Sum_probs=79.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|-++..+. + ..+|+++|+++.+++.++++....+. +..+...|....+.+
T Consensus 108 ~VLDlGCG~gpLal~~~---~-----------~~~y~a~DId~~~i~~ar~~~~~~g~------~~~~~v~D~~~~~~~- 166 (253)
T 3frh_A 108 RVLDIACGLNPLALYER---G-----------IASVWGCDIHQGLGDVITPFAREKDW------DFTFALQDVLCAPPA- 166 (253)
T ss_dssp EEEEETCTTTHHHHHHT---T-----------CSEEEEEESBHHHHHHHHHHHHHTTC------EEEEEECCTTTSCCC-
T ss_pred eEEEecCCccHHHHHhc---c-----------CCeEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeecccCCCC-
Confidence 69999999999988776 3 67999999999999999999877652 788999998776644
Q ss_pred CCeeEEEEccccccccCH-HHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRI-DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~-~~~l~~~~~~L~p~G~l~~~~ 120 (131)
++||+|++.-.+|++++. .....++...|+++++++-.+
T Consensus 167 ~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 167 EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 589999999888888632 223338888999999887665
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=9.1e-12 Score=85.49 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=58.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+.. +++++.+|+.+.++
T Consensus 45 ~VLDiG~G~G~lt~~La~~-------------~~~v~~vDi~~~~~~~a~~~~~~~~~~-----~v~~~~~D~~~~~~-- 104 (299)
T 2h1r_A 45 IVLEIGCGTGNLTVKLLPL-------------AKKVITIDIDSRMISEVKKRCLYEGYN-----NLEVYEGDAIKTVF-- 104 (299)
T ss_dssp EEEEECCTTSTTHHHHTTT-------------SSEEEEECSCHHHHHHHHHHHHHTTCC-----CEEC----CCSSCC--
T ss_pred EEEEEcCcCcHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEECchhhCCc--
Confidence 6899999999999988875 468999999999999999988755442 79999999887654
Q ss_pred CCeeEEEEccccccc
Q psy890 82 DSYSAYTIAFGIRNV 96 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~ 96 (131)
.+||+|+++...++.
T Consensus 105 ~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 105 PKFDVCTANIPYKIS 119 (299)
T ss_dssp CCCSEEEEECCGGGH
T ss_pred ccCCEEEEcCCcccc
Confidence 379999997665544
No 244
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.32 E-value=4e-13 Score=90.80 Aligned_cols=99 Identities=11% Similarity=0.028 Sum_probs=68.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHh-hhccCCCCCCCceeEE--ecccccCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA-RDLFKVPVPNPRLRFL--EANAEELP 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~d~~~~~ 78 (131)
+|||+|||+|.++..+++. .+|+++|+++ +...+.+.. ...... .++.++ ..|+..++
T Consensus 77 ~VLDlGcGtG~~s~~la~~--------------~~V~gvD~s~-m~~~a~~~~~~~~~~~----~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 77 RVVDLGCGRGGWSYYAASR--------------PHVMDVRAYT-LGVGGHEVPRITESYG----WNIVKFKSRVDIHTLP 137 (265)
T ss_dssp EEEEESCTTSHHHHHHHTS--------------TTEEEEEEEC-CCCSSCCCCCCCCBTT----GGGEEEECSCCTTTSC
T ss_pred EEEEeCcCCCHHHHHHHHc--------------CcEEEEECch-hhhhhhhhhhhhhccC----CCeEEEecccCHhHCC
Confidence 6999999999999887764 3699999988 432221110 000000 157888 88888764
Q ss_pred CCCCCeeEEEEccccccccCH----H---HHHHHHHHhccCCc--EEEEEecc
Q psy890 79 IESDSYSAYTIAFGIRNVTRI----D---KALSEAYRVLKPGG--RFLCLEFS 122 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~----~---~~l~~~~~~L~p~G--~l~~~~~~ 122 (131)
.++||+|++..+ +...+. . .++..+.++|+||| .+++..+.
T Consensus 138 --~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 --VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp --CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred --CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 578999999876 433221 1 37888999999999 98886665
No 245
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=4e-11 Score=85.11 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=81.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCC---------------------------CCCCCeEEEEeCCHHHHHHHHHHh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLS---------------------------EHCAPHVTVADINRAMLDVGEQRA 54 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~---------------------------~~~~~~~~~~D~s~~~~~~~~~~~ 54 (131)
.+||++||+|.+.+.++....+.+++... .....+++++|+++.+++.++++.
T Consensus 204 ~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na 283 (393)
T 3k0b_A 204 PFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNA 283 (393)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHH
Confidence 58999999999988887765432211000 001256999999999999999999
Q ss_pred hhccCCCCCCCceeEEecccccCCCCCCCeeEEEEccc--cccc--cCHHHHHHHHHHhccC--CcEEEEEec
Q psy890 55 RDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFG--IRNV--TRIDKALSEAYRVLKP--GGRFLCLEF 121 (131)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~--l~~~--~~~~~~l~~~~~~L~p--~G~l~~~~~ 121 (131)
...++.+ ++.+...|+.+.+.+ .+||+|+++-. ...- .+...++.++.+.|++ ||.++++..
T Consensus 284 ~~~gl~~----~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 284 VEAGLGD----LITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHTTCTT----CSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHcCCCC----ceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9888764 799999999887654 58999999733 3211 2344556666666665 888877653
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.29 E-value=1.5e-12 Score=89.60 Aligned_cols=99 Identities=8% Similarity=-0.021 Sum_probs=67.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC----CHHHHHHHHHHhhhccCCCCCCCceeEEec-cccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI----NRAMLDVGEQRARDLFKVPVPNPRLRFLEA-NAEE 76 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~----s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~ 76 (131)
+|||+|||+|.++..+++. .+|+++|+ ++.++... .....+. +++.++.. |+..
T Consensus 85 ~VLDlGcG~G~~s~~la~~--------------~~V~gvD~~~~~~~~~~~~~--~~~~~~~-----~~v~~~~~~D~~~ 143 (305)
T 2p41_A 85 KVVDLGCGRGGWSYYCGGL--------------KNVREVKGLTKGGPGHEEPI--PMSTYGW-----NLVRLQSGVDVFF 143 (305)
T ss_dssp EEEEETCTTSHHHHHHHTS--------------TTEEEEEEECCCSTTSCCCC--CCCSTTG-----GGEEEECSCCTTT
T ss_pred EEEEEcCCCCHHHHHHHhc--------------CCEEEEeccccCchhHHHHH--HhhhcCC-----CCeEEEecccccc
Confidence 6999999999999888774 36999998 55433111 0111111 26888888 8776
Q ss_pred CCCCCCCeeEEEEccccc---cccCHH---HHHHHHHHhccCCcEEEEEeccC
Q psy890 77 LPIESDSYSAYTIAFGIR---NVTRID---KALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 77 ~~~~~~~~D~i~~~~~l~---~~~~~~---~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
++ .++||+|++..+.+ +..+.. .+|..+.++|||||.+++..+..
T Consensus 144 l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 144 IP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 54 46899999977653 222222 47888899999999988754443
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.29 E-value=3.5e-11 Score=86.39 Aligned_cols=96 Identities=17% Similarity=0.144 Sum_probs=72.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC----
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL---- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---- 77 (131)
+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+.. +++++..|+.+.
T Consensus 289 ~VLDlgcG~G~~~~~la~~-------------~~~V~gvD~s~~al~~A~~n~~~~~~~-----~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 289 RVLDLFCGMGNFTLPLATQ-------------AASVVGVEGVPALVEKGQQNARLNGLQ-----NVTFYHENLEEDVTKQ 350 (433)
T ss_dssp EEEEESCTTTTTHHHHHTT-------------SSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCTTSCCSSS
T ss_pred EEEECCCCCCHHHHHHHhh-------------CCEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEECCHHHHhhhh
Confidence 6899999999999998875 468999999999999999999877654 799999998772
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++..++||+|++.-.-... ...+..+. .++|++++++.
T Consensus 351 ~~~~~~fD~Vv~dPPr~g~---~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAGA---AGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp GGGTTCCSEEEECCCTTCC---HHHHHHHH-HHCCSEEEEEE
T ss_pred hhhcCCCCEEEECCCCccH---HHHHHHHH-hcCCCeEEEEE
Confidence 2445689999985433222 23444443 36787777663
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.27 E-value=1.8e-11 Score=83.89 Aligned_cols=74 Identities=9% Similarity=0.077 Sum_probs=63.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.++..+++++.... +++++.+|+.+.+++.
T Consensus 53 ~VLEIG~G~G~lT~~La~~-------------~~~V~aVEid~~li~~a~~~~~~~~-------~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 53 VVLEIGLGKGILTEELAKN-------------AKKVYVIEIDKSLEPYANKLKELYN-------NIEIIWGDALKVDLNK 112 (295)
T ss_dssp EEEEECCTTSHHHHHHHHH-------------SSEEEEEESCGGGHHHHHHHHHHCS-------SEEEEESCTTTSCGGG
T ss_pred EEEEECCCchHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHhccCC-------CeEEEECchhhCCccc
Confidence 6999999999999999886 4689999999999999999987433 8999999999887777
Q ss_pred CCeeEEEEcccccc
Q psy890 82 DSYSAYTIAFGIRN 95 (131)
Q Consensus 82 ~~~D~i~~~~~l~~ 95 (131)
.+||.|+++...+.
T Consensus 113 ~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 113 LDFNKVVANLPYQI 126 (295)
T ss_dssp SCCSEEEEECCGGG
T ss_pred CCccEEEEeCcccc
Confidence 78999998765443
No 249
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.27 E-value=1.6e-10 Score=79.66 Aligned_cols=107 Identities=10% Similarity=0.007 Sum_probs=78.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
.+|||+|||+|..+..++.... ...+|+++|+++.+++.++++++..+.. +++++..|+.+....
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~----------~~g~V~a~D~~~~~l~~~~~n~~r~g~~-----~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLK----------NQGKIFAFDLDAKRLASMATLLARAGVS-----CCELAEEDFLAVSPS 168 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGSCTT
T ss_pred CEEEEeCCChhHHHHHHHHHhC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEeCChHhcCcc
Confidence 3699999999999999998764 3578999999999999999999887764 799999998776432
Q ss_pred C---CCeeEEEEccc------ccccc-----------CH-------HHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 S---DSYSAYTIAFG------IRNVT-----------RI-------DKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~---~~~D~i~~~~~------l~~~~-----------~~-------~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
. .+||.|++... +..-+ +. ..+|..+.++++ ||+++...++-
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 1 57999997322 11101 11 235666777776 89988766553
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.25 E-value=3.2e-11 Score=86.83 Aligned_cols=115 Identities=10% Similarity=-0.048 Sum_probs=80.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCC--CCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSE--HCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|.+...+++.+.+........ ....+++|+|+++.++..|+.++...+... .+..+..+|....+.
T Consensus 174 ~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~---~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 174 TVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT---DRSPIVCEDSLEKEP 250 (445)
T ss_dssp CEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS---SCCSEEECCTTTSCC
T ss_pred EEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc---CCCCEeeCCCCCCcc
Confidence 699999999999988888753211000000 013579999999999999999887666431 146778888766543
Q ss_pred CCCCeeEEEEccccccccC-----------------HHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTR-----------------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~-----------------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .+||+|+++..+..... ...++.++.++|+|||++.++-
T Consensus 251 ~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 251 S-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp S-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 2 48999999755443211 1378999999999999988765
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.25 E-value=1.4e-10 Score=82.04 Aligned_cols=115 Identities=10% Similarity=0.023 Sum_probs=83.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCC---------------------------CCCCCeEEEEeCCHHHHHHHHHHh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLS---------------------------EHCAPHVTVADINRAMLDVGEQRA 54 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~---------------------------~~~~~~~~~~D~s~~~~~~~~~~~ 54 (131)
.+||.+||+|.+.+.++....+.+++... .....+++++|+++.+++.++++.
T Consensus 197 ~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na 276 (384)
T 3ldg_A 197 PFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNA 276 (384)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHH
T ss_pred eEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHH
Confidence 58999999999988887765432211000 001256999999999999999999
Q ss_pred hhccCCCCCCCceeEEecccccCCCCCCCeeEEEEccc--ccc--ccCHHHHHHHHHHhccC--CcEEEEEec
Q psy890 55 RDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFG--IRN--VTRIDKALSEAYRVLKP--GGRFLCLEF 121 (131)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~--l~~--~~~~~~~l~~~~~~L~p--~G~l~~~~~ 121 (131)
...++.+ ++.+...|+.+.+.+ .+||+|+++-. ... -.+...++.++.+.|++ ||.++++..
T Consensus 277 ~~~gl~~----~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 277 REVGLED----VVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHTTCTT----TEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHcCCCC----ceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9888764 799999999987654 48999999743 321 13455666777777765 888877653
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.25 E-value=4.2e-11 Score=79.99 Aligned_cols=68 Identities=15% Similarity=0.164 Sum_probs=56.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.++..++++..... +++++.+|+.+.+++.
T Consensus 33 ~VLDiG~G~G~lt~~l~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 33 NIFEIGSGKGHFTLELVQR-------------CNFVTAIEIDHKLCKTTENKLVDHD-------NFQVLNKDILQFKFPK 92 (244)
T ss_dssp EEEEECCTTSHHHHHHHHH-------------SSEEEEECSCHHHHHHHHHHTTTCC-------SEEEECCCGGGCCCCS
T ss_pred EEEEEeCCchHHHHHHHHc-------------CCeEEEEECCHHHHHHHHHhhccCC-------CeEEEEChHHhCCccc
Confidence 6899999999999999886 4689999999999999999886432 8999999999887653
Q ss_pred -CCeeEEEEc
Q psy890 82 -DSYSAYTIA 90 (131)
Q Consensus 82 -~~~D~i~~~ 90 (131)
..|+ |+++
T Consensus 93 ~~~~~-vv~n 101 (244)
T 1qam_A 93 NQSYK-IFGN 101 (244)
T ss_dssp SCCCE-EEEE
T ss_pred CCCeE-EEEe
Confidence 4563 4444
No 253
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.25 E-value=2e-11 Score=83.37 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=66.1
Q ss_pred Cceeeeeccc------chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeE-Eecc
Q psy890 1 MYILFYLVFP------GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRF-LEAN 73 (131)
Q Consensus 1 ~~iLdig~G~------G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d 73 (131)
++|||+|||+ |. ..+++..+ ...+++++|+++. + . ++++ +.+|
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~----------~~~~V~gvDis~~--------v-----~-----~v~~~i~gD 114 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLP----------TGTLLVDSDLNDF--------V-----S-----DADSTLIGD 114 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSC----------TTCEEEEEESSCC--------B-----C-----SSSEEEESC
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcC----------CCCEEEEEECCCC--------C-----C-----CCEEEEECc
Confidence 4699999955 55 33444443 2578999999986 1 1 6788 9999
Q ss_pred cccCCCCCCCeeEEEEccccccc-----------cCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 74 AEELPIESDSYSAYTIAFGIRNV-----------TRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 74 ~~~~~~~~~~~D~i~~~~~l~~~-----------~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
+.+.++. ++||+|+++...+.. .....++.++.++|||||.+++..+..
T Consensus 115 ~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 115 CATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp GGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred cccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 9886644 679999996432211 113578999999999999999866544
No 254
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.25 E-value=6.8e-11 Score=84.72 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=72.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+|+.+++.++++....+. .++++..|+.+...
T Consensus 293 ~VLDlgcG~G~~sl~la~~-------------~~~V~gvD~s~~ai~~A~~n~~~ngl------~v~~~~~d~~~~~~-- 351 (425)
T 2jjq_A 293 KILDMYSGVGTFGIYLAKR-------------GFNVKGFDSNEFAIEMARRNVEINNV------DAEFEVASDREVSV-- 351 (425)
T ss_dssp EEEEETCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHHTC------CEEEEECCTTTCCC--
T ss_pred EEEEeeccchHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHcCC------cEEEEECChHHcCc--
Confidence 6899999999999998875 46899999999999999999877552 38899999887642
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.+||+|++...-... ....+..+ +.|+|+|++++.
T Consensus 352 ~~fD~Vv~dPPr~g~--~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGL--HPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TTCSEEEECCCTTCS--CHHHHHHH-HHHCCSEEEEEE
T ss_pred cCCCEEEEcCCccch--HHHHHHHH-HhcCCCcEEEEE
Confidence 279999985442211 12344444 458999998875
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.25 E-value=8e-11 Score=83.41 Aligned_cols=115 Identities=10% Similarity=0.045 Sum_probs=82.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCC---------------------------CCCCCeEEEEeCCHHHHHHHHHHh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLS---------------------------EHCAPHVTVADINRAMLDVGEQRA 54 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~---------------------------~~~~~~~~~~D~s~~~~~~~~~~~ 54 (131)
.+||++||+|.+.+.++....+.+++... .....+++|+|+++.+++.++++.
T Consensus 198 ~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na 277 (385)
T 3ldu_A 198 VLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENA 277 (385)
T ss_dssp CEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHH
Confidence 68999999999988887764322111000 001257999999999999999999
Q ss_pred hhccCCCCCCCceeEEecccccCCCCCCCeeEEEEccccc--c--ccCHHHHHHHHHHhccC--CcEEEEEec
Q psy890 55 RDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIR--N--VTRIDKALSEAYRVLKP--GGRFLCLEF 121 (131)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~--~--~~~~~~~l~~~~~~L~p--~G~l~~~~~ 121 (131)
...++.+ ++++...|+.+++.+ .+||+|+++-... . ..+....+.++.+.|++ |+.++++..
T Consensus 278 ~~~gl~~----~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 278 EIAGVDE----YIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHTCGG----GEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHcCCCC----ceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 8887654 799999999887643 5899999964432 1 12455666777777766 888777653
No 256
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.24 E-value=2.1e-11 Score=85.26 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=77.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc---CCCCCCCceeEEecccccCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF---KVPVPNPRLRFLEANAEELP 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~ 78 (131)
+||++|||+|..+..+++. +..+++++|+++.+++.++++++... +.+++.++++++..|....-
T Consensus 191 rVL~IGgG~G~~arellk~------------~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L 258 (364)
T 2qfm_A 191 DVLILGGGDGGILCEIVKL------------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 258 (364)
T ss_dssp EEEEEECTTCHHHHHHHTT------------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred EEEEEECChhHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH
Confidence 6899999999999988876 23689999999999999999976421 22211126899999977642
Q ss_pred C----CCCCeeEEEEcccc-cc--cc---CHHHHHHHH----HHhccCCcEEEEEec
Q psy890 79 I----ESDSYSAYTIAFGI-RN--VT---RIDKALSEA----YRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ~----~~~~~D~i~~~~~l-~~--~~---~~~~~l~~~----~~~L~p~G~l~~~~~ 121 (131)
. ..++||+|++...- .. .+ -...++..+ .+.|+|||++++-..
T Consensus 259 ~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 259 KRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 1 35789999996432 11 11 124556666 899999999987543
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.22 E-value=2e-11 Score=86.00 Aligned_cols=99 Identities=11% Similarity=0.096 Sum_probs=75.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
.|||+|||+|.++..+++. ..+|+++|+++.+++.++++.+..+.. +++++..|+.+.. .
T Consensus 216 ~vLDl~cG~G~~~l~la~~-------------~~~V~gvd~~~~ai~~a~~n~~~ng~~-----~v~~~~~d~~~~~~~~ 277 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALARN-------------FDRVLATEIAKPSVAAAQYNIAANHID-----NVQIIRMAAEEFTQAM 277 (369)
T ss_dssp EEEEESCTTSHHHHHHGGG-------------SSEEEEECCCHHHHHHHHHHHHHTTCC-----SEEEECCCSHHHHHHH
T ss_pred EEEEccCCCCHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEECCHHHHHHHH
Confidence 5899999999999988774 468999999999999999999887764 8999999977642 1
Q ss_pred CC--------------CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 ES--------------DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 ~~--------------~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
.. .+||+|++.-.-. ....++.+.|+++|.++.+++...
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~------g~~~~~~~~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPRS------GLDSETEKMVQAYPRILYISCNPE 330 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCTT------CCCHHHHHHHTTSSEEEEEESCHH
T ss_pred hhccccccccccccccCCCCEEEECcCcc------ccHHHHHHHHhCCCEEEEEECCHH
Confidence 11 3799998753211 123456667779999988876643
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.21 E-value=5e-11 Score=84.23 Aligned_cols=98 Identities=16% Similarity=0.033 Sum_probs=78.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc---------------cCCCCCCCc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL---------------FKVPVPNPR 66 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---------------~~~~~~~~~ 66 (131)
+|||+|||+|..+..++...+ ..+++++|+++.+++.++++++.. +.. +
T Consensus 50 ~VLDl~aGtG~~~l~~a~~~~-----------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-----~ 113 (378)
T 2dul_A 50 IVLDALSATGIRGIRFALETP-----------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-----T 113 (378)
T ss_dssp EEEESSCTTSHHHHHHHHHSS-----------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-----E
T ss_pred EEEECCCchhHHHHHHHHhCC-----------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-----c
Confidence 689999999999999998754 467999999999999999999876 543 5
Q ss_pred eeEEecccccCC-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 67 LRFLEANAEELP-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 67 ~~~~~~d~~~~~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
++++..|+.... ...+.||+|++.-. .....++..+.+.|+|||+++++
T Consensus 114 i~v~~~Da~~~~~~~~~~fD~I~lDP~----~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 114 IVINHDDANRLMAERHRYFHFIDLDPF----GSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp EEEEESCHHHHHHHSTTCEEEEEECCS----SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEcCcHHHHHHhccCCCCEEEeCCC----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 889999977642 11357999996431 12357788899999999988765
No 259
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.19 E-value=7.3e-11 Score=83.65 Aligned_cols=101 Identities=13% Similarity=0.032 Sum_probs=80.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCc-eeEEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPR-LRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~-- 78 (131)
+|||++||+|..+..++.... ...+++++|+++.+++.++++++.+++.+ + ++++..|+.+.-
T Consensus 55 ~VLDlfaGtG~~sl~aa~~~~----------ga~~V~avDi~~~av~~~~~N~~~Ngl~~----~~v~v~~~Da~~~l~~ 120 (392)
T 3axs_A 55 KVADPLSASGIRAIRFLLETS----------CVEKAYANDISSKAIEIMKENFKLNNIPE----DRYEIHGMEANFFLRK 120 (392)
T ss_dssp EEEESSCTTSHHHHHHHHHCS----------CEEEEEEECSCHHHHHHHHHHHHHTTCCG----GGEEEECSCHHHHHHS
T ss_pred EEEECCCcccHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHHHHHHHhCCCC----ceEEEEeCCHHHHHHH
Confidence 589999999999999988643 13689999999999999999999888763 5 999999976542
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...+.||+|++.- ......++..+.+.|+|||++++..
T Consensus 121 ~~~~~fD~V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 121 EWGFGFDYVDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CCSSCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhCCCCcEEEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 1245799999865 1223568888999999999776643
No 260
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=5.9e-11 Score=84.54 Aligned_cols=96 Identities=18% Similarity=0.085 Sum_probs=72.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++... ...+++++|+++.+++.+ . ++.++..|+.... ..
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~----------~~~~i~gvDi~~~~~~~a-------~-------~~~~~~~D~~~~~-~~ 96 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHG----------TAYRFVGVEIDPKALDLP-------P-------WAEGILADFLLWE-PG 96 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHC----------SCSEEEEEESCTTTCCCC-------T-------TEEEEESCGGGCC-CS
T ss_pred EEEECCCCChHHHHHHHHHhC----------CCCeEEEEECCHHHHHhC-------C-------CCcEEeCChhhcC-cc
Confidence 689999999999999988763 257899999999888665 1 7889999987754 34
Q ss_pred CCeeEEEEcccccc----------c-cC------------------HHHHHHHHHHhccCCcEEEEEecc
Q psy890 82 DSYSAYTIAFGIRN----------V-TR------------------IDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~~----------~-~~------------------~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++||+|+++-.... + .+ ...++.++.++|+|||++.++-..
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 68999999633211 1 11 125688999999999998876543
No 261
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.15 E-value=2.6e-12 Score=85.80 Aligned_cols=96 Identities=9% Similarity=0.092 Sum_probs=71.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. ..+++++|+++.+++.++++.... .+++++..|+.+.+++.
T Consensus 32 ~VLDiG~G~G~~~~~l~~~-------------~~~v~~id~~~~~~~~a~~~~~~~-------~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAKI-------------SKQVTSIELDSHLFNLSSEKLKLN-------TRVTLIHQDILQFQFPN 91 (245)
T ss_dssp EEEECSCCCSSCSHHHHHH-------------SSEEEESSSSCSSSSSSSCTTTTC-------SEEEECCSCCTTTTCCC
T ss_pred EEEEEeCCCCHHHHHHHHh-------------CCeEEEEECCHHHHHHHHHHhccC-------CceEEEECChhhcCccc
Confidence 6899999999999999886 468999999999999888776521 28999999999887653
Q ss_pred -CCeeEEEEcccccc-----------ccCHHHHH----HHHHHhccCCcEEEE
Q psy890 82 -DSYSAYTIAFGIRN-----------VTRIDKAL----SEAYRVLKPGGRFLC 118 (131)
Q Consensus 82 -~~~D~i~~~~~l~~-----------~~~~~~~l----~~~~~~L~p~G~l~~ 118 (131)
++| .|+++...+. .......+ +.+.++|+|||.+.+
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 578 5666432211 11222233 568899999998765
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.14 E-value=2e-10 Score=77.19 Aligned_cols=69 Identities=7% Similarity=0.100 Sum_probs=57.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE- 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~- 80 (131)
+|||+|||+|.++..+++. ..+++++|+++.++..+++++.... +++++.+|+.+++++
T Consensus 32 ~VLEIG~G~G~lt~~La~~-------------~~~V~avEid~~~~~~~~~~~~~~~-------~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 32 TLVEIGPGRGALTDYLLTE-------------CDNLALVEIDRDLVAFLQKKYNQQK-------NITIYQNDALQFDFSS 91 (255)
T ss_dssp EEEEECCTTTTTHHHHTTT-------------SSEEEEEECCHHHHHHHHHHHTTCT-------TEEEEESCTTTCCGGG
T ss_pred EEEEEcccccHHHHHHHHh-------------CCEEEEEECCHHHHHHHHHHHhhCC-------CcEEEEcchHhCCHHH
Confidence 6899999999999999886 4689999999999999999886522 899999999887653
Q ss_pred ---CCCeeEEEEcc
Q psy890 81 ---SDSYSAYTIAF 91 (131)
Q Consensus 81 ---~~~~D~i~~~~ 91 (131)
.++|| |+++.
T Consensus 92 ~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 92 VKTDKPLR-VVGNL 104 (255)
T ss_dssp SCCSSCEE-EEEEC
T ss_pred hccCCCeE-EEecC
Confidence 35688 55543
No 263
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.13 E-value=3.5e-10 Score=84.27 Aligned_cols=103 Identities=10% Similarity=-0.046 Sum_probs=75.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|-++...++...... ...+|+++|.|+ +...+++..+.+++.+ +++++.+|++++..+
T Consensus 360 vVldVGaGrGpLv~~al~A~a~~~-------~~vkVyAVEknp-~A~~a~~~v~~N~~~d----kVtVI~gd~eev~LP- 426 (637)
T 4gqb_A 360 VLMVLGAGRGPLVNASLRAAKQAD-------RRIKLYAVEKNP-NAVVTLENWQFEEWGS----QVTVVSSDMREWVAP- 426 (637)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTT-------CEEEEEEEESCH-HHHHHHHHHHHHTTGG----GEEEEESCTTTCCCS-
T ss_pred EEEEECCCCcHHHHHHHHHHHhcC-------CCcEEEEEECCH-HHHHHHHHHHhccCCC----eEEEEeCcceeccCC-
Confidence 589999999999665555432100 245899999987 6667788888888876 899999999998655
Q ss_pred CCeeEEEEccccc--cccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAFGIR--NVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~~l~--~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
+++|+||+=++=. ..+.....+....+.|||||+++
T Consensus 427 EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 427 EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 6799999833211 11223467788889999999875
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.13 E-value=1.9e-09 Score=69.97 Aligned_cols=94 Identities=12% Similarity=-0.048 Sum_probs=71.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC--CCCCCCceeEEecccccC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK--VPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~-- 77 (131)
+|||+|| |..+..+++. ...+++.+|.+++..+.++++++..++ .+ ++.++.+|+.+.
T Consensus 33 ~VLEiGt--GySTl~lA~~------------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~----~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 33 VILEYGS--GGSTVVAAEL------------PGKHVTSVESDRAWARMMKAWLAANPPAEGT----EVNIVWTDIGPTGD 94 (202)
T ss_dssp EEEEESC--SHHHHHHHTS------------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTC----EEEEEECCCSSBCG
T ss_pred EEEEECc--hHHHHHHHHc------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCC----ceEEEEeCchhhhc
Confidence 6899998 4566666652 147899999999999999999998876 54 899998885432
Q ss_pred -------------C--------C-CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 78 -------------P--------I-ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 78 -------------~--------~-~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
+ . ..++||+|+.-.. .....+..+.+.|+|||++++
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEE
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEE
Confidence 1 1 1367999998653 234666778899999999966
No 265
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.10 E-value=6.5e-10 Score=78.32 Aligned_cols=125 Identities=9% Similarity=0.050 Sum_probs=79.6
Q ss_pred CceeeeecccchhhHHHhhhhcC----CCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC-------CCCC--CCc-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDK----LPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK-------VPVP--NPR- 66 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-------~~~~--~~~- 66 (131)
++|+|+||++|.++..+...+-+ .........+..++..-|...+.....-+.++...- .... .+.
T Consensus 54 ~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f 133 (374)
T 3b5i_A 54 FTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYF 133 (374)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSE
T ss_pred eEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceE
Confidence 36999999999998887443210 000000012468899999888777666555543210 0000 001
Q ss_pred eeEEecccccCCCCCCCeeEEEEcccccccc--------------------------------------CHHHHHHHHHH
Q psy890 67 LRFLEANAEELPIESDSYSAYTIAFGIRNVT--------------------------------------RIDKALSEAYR 108 (131)
Q Consensus 67 ~~~~~~d~~~~~~~~~~~D~i~~~~~l~~~~--------------------------------------~~~~~l~~~~~ 108 (131)
+.-+..++-.-.++.+++|+|++++++||++ |...+|+...+
T Consensus 134 ~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~ 213 (374)
T 3b5i_A 134 VAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAA 213 (374)
T ss_dssp EEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223444444457889999999999999987 33456888899
Q ss_pred hccCCcEEEEEeccCCC
Q psy890 109 VLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 109 ~L~p~G~l~~~~~~~~~ 125 (131)
.|+|||++++.-.++..
T Consensus 214 eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 214 EVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HEEEEEEEEEEEEECCC
T ss_pred HhCCCCEEEEEEecCCC
Confidence 99999999987666544
No 266
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.09 E-value=4.2e-10 Score=76.23 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=60.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++..+++. +.+++++|+++.++..+++++.. . +++++.+|+.+.+++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~-------------~~~V~avEid~~~~~~l~~~~~~-~-------~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA-------------GAEVTAIEKDLRLRPVLEETLSG-L-------PVRLVFQDALLYPWEE 107 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT-------------TCCEEEEESCGGGHHHHHHHTTT-S-------SEEEEESCGGGSCGGG
T ss_pred eEEEEeCchHHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHhcCC-C-------CEEEEECChhhCChhh
Confidence 5899999999999999886 46899999999999999998763 2 8999999998887653
Q ss_pred -CCeeEEEEccccc
Q psy890 82 -DSYSAYTIAFGIR 94 (131)
Q Consensus 82 -~~~D~i~~~~~l~ 94 (131)
..+|.|+++...+
T Consensus 108 ~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 108 VPQGSLLVANLPYH 121 (271)
T ss_dssp SCTTEEEEEEECSS
T ss_pred ccCccEEEecCccc
Confidence 2688888876544
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.09 E-value=3.6e-10 Score=83.19 Aligned_cols=120 Identities=7% Similarity=-0.143 Sum_probs=80.3
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCC-------CCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEH-------CAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN 73 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 73 (131)
.+|||.+||+|.+...+++.+........... ...+++|+|+++.++..|+.++...+....+..+..+...|
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gD 250 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGN 250 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESC
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCC
Confidence 36999999999999888887642210000000 02479999999999999999887655431000016778888
Q ss_pred cccCC-CCCCCeeEEEEcccccccc-------------C-HHHHHHHHHHhccCCcEEEEEe
Q psy890 74 AEELP-IESDSYSAYTIAFGIRNVT-------------R-IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 74 ~~~~~-~~~~~~D~i~~~~~l~~~~-------------~-~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....+ ....+||+|+++-.+.... + ...++.++.+.|+|||++.++-
T Consensus 251 tL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 251 TLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 65432 3346799999975543221 1 2378999999999999988764
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.07 E-value=2.3e-09 Score=81.13 Aligned_cols=116 Identities=12% Similarity=0.056 Sum_probs=80.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCC-------------------------------CCCCeEEEEeCCHHHHHHH
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSE-------------------------------HCAPHVTVADINRAMLDVG 50 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~-------------------------------~~~~~~~~~D~s~~~~~~~ 50 (131)
.+||.+||+|.+.+.++....+.+++.... ....+++|+|+++.++..|
T Consensus 193 ~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A 272 (703)
T 3v97_A 193 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRA 272 (703)
T ss_dssp CEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHH
T ss_pred eEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHH
Confidence 589999999999888877643222221100 0125799999999999999
Q ss_pred HHHhhhccCCCCCCCceeEEecccccCCCC--CCCeeEEEEc--cccccc--cCHHH---HHHHHHHhccCCcEEEEEec
Q psy890 51 EQRARDLFKVPVPNPRLRFLEANAEELPIE--SDSYSAYTIA--FGIRNV--TRIDK---ALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~i~~~--~~l~~~--~~~~~---~l~~~~~~L~p~G~l~~~~~ 121 (131)
+++....++.+ .+.+...|+.++..+ .++||+|+++ ++...- .+... .+.+..+.+.|||.++++..
T Consensus 273 ~~N~~~agv~~----~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 273 RTNARLAGIGE----LITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHTTCGG----GEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHcCCCC----ceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 99999888764 699999999887422 3379999997 333221 12333 34455555568999888653
No 269
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.06 E-value=1.1e-09 Score=74.67 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=79.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc---cCCCCCCCceeEEecccccC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL---FKVPVPNPRLRFLEANAEEL- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~- 77 (131)
+||-+|.|.|...+.+++..+ ..+++.+|+++.+++.+++.++.. .+.+ ++++++..|....
T Consensus 86 ~VLIiGgGdG~~~revlk~~~-----------v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~d---pRv~v~~~Dg~~~l 151 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHKN-----------VESITMVEIDAGVVSFCRQYLPNHNAGSYDD---PRFKLVIDDGVNFV 151 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCTT-----------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGC---TTEEEEESCTTTTT
T ss_pred eEEEECCCchHHHHHHHHcCC-----------cceEEEEcCCHHHHHHHHhcCccccccccCC---CcEEEEechHHHHH
Confidence 589999999999999988753 678999999999999999887542 2333 4899999997765
Q ss_pred CCCCCCeeEEEEcccccccc----CHHHHHHHHHHhccCCcEEEE
Q psy890 78 PIESDSYSAYTIAFGIRNVT----RIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~----~~~~~l~~~~~~L~p~G~l~~ 118 (131)
....++||+|+.-..-...+ --..+++.+++.|+|||++..
T Consensus 152 ~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 152 NQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp SCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred hhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 33457899999853311111 125789999999999999976
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.04 E-value=6e-10 Score=83.45 Aligned_cols=111 Identities=13% Similarity=-0.028 Sum_probs=72.9
Q ss_pred ceeeeecccchhhHHHhhhhc-CCCCCCCC-CCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVD-KLPPNTLS-EHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~-~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|||+|||+|-++...++... .....+.. .....+|+++|.|+.+....+.+.. .++.+ +++++.+|++++..
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d----~VtVI~gd~eev~l 486 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKR----RVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTT----CSEEEESCGGGHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCC----eEEEEeCchhhccc
Confidence 589999999999754433321 00000000 0014599999999977766555544 56664 89999999998765
Q ss_pred C-----CCCeeEEEEccccccc--cCHHHHHHHHHHhccCCcEEE
Q psy890 80 E-----SDSYSAYTIAFGIRNV--TRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 80 ~-----~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~p~G~l~ 117 (131)
+ .+++|+|++=+.=... +-....|....+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 5789999995442221 223456777789999999875
No 271
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.03 E-value=6.3e-10 Score=78.54 Aligned_cols=122 Identities=10% Similarity=0.011 Sum_probs=72.7
Q ss_pred CceeeeecccchhhHHHhhhh----cCCCCC--CCCCCCCCeEEEEeCCHHHHHHHHHHhh-------h-ccCCCCCCCc
Q psy890 1 MYILFYLVFPGDIAFRFLNYV----DKLPPN--TLSEHCAPHVTVADINRAMLDVGEQRAR-------D-LFKVPVPNPR 66 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~----~~~~~~--~~~~~~~~~~~~~D~s~~~~~~~~~~~~-------~-~~~~~~~~~~ 66 (131)
++|+|+||++|.++..+...+ .+.... .....+..++..-|...+-....-+.++ . .+... .
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~----~ 129 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKI----G 129 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCT----T
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCC----C
Confidence 369999999999988877652 222111 0011246789999987322221111111 1 11000 2
Q ss_pred eeEE---ecccccCCCCCCCeeEEEEccccccccCHH---------------------------------------HHHH
Q psy890 67 LRFL---EANAEELPIESDSYSAYTIAFGIRNVTRID---------------------------------------KALS 104 (131)
Q Consensus 67 ~~~~---~~d~~~~~~~~~~~D~i~~~~~l~~~~~~~---------------------------------------~~l~ 104 (131)
--|+ .+++-.-.++.+++|+|++++++||+.+.. .+|.
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2333 333433458889999999999999986432 1255
Q ss_pred HHHHhccCCcEEEEEeccCCCc
Q psy890 105 EAYRVLKPGGRFLCLEFSHVNN 126 (131)
Q Consensus 105 ~~~~~L~p~G~l~~~~~~~~~~ 126 (131)
...+.|+|||++++.-.++...
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHhccCCeEEEEEecCCCc
Confidence 5589999999999877666543
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.01 E-value=6.1e-10 Score=76.46 Aligned_cols=75 Identities=15% Similarity=0.262 Sum_probs=62.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
++||+|||+|..+..+++..+ ..+++++|.|+.+++.++++....+ + +++++..|+..++ +
T Consensus 29 ~vLD~g~G~G~~s~~la~~~~-----------~~~VigvD~d~~al~~A~~~~~~~g--~----~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 29 IILDCTVGEGGHSRAILEHCP-----------GCRIIGIDVDSEVLRIAEEKLKEFS--D----RVSLFKVSYREADFLL 91 (301)
T ss_dssp EEEETTCTTSHHHHHHHHHCT-----------TCEEEEEESCHHHHHHHHHHTGGGT--T----TEEEEECCGGGHHHHH
T ss_pred EEEEEeCCcCHHHHHHHHHCC-----------CCEEEEEECCHHHHHHHHHHHHhcC--C----cEEEEECCHHHHHHHH
Confidence 689999999999999998853 5789999999999999999987765 2 8999999988764 1
Q ss_pred C---CCCeeEEEEcccc
Q psy890 80 E---SDSYSAYTIAFGI 93 (131)
Q Consensus 80 ~---~~~~D~i~~~~~l 93 (131)
. ..+||.|++...+
T Consensus 92 ~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 92 KTLGIEKVDGILMDLGV 108 (301)
T ss_dssp HHTTCSCEEEEEEECSC
T ss_pred HhcCCCCCCEEEEcCcc
Confidence 1 1579999986543
No 273
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.00 E-value=4.4e-10 Score=78.74 Aligned_cols=123 Identities=9% Similarity=0.008 Sum_probs=82.6
Q ss_pred CceeeeecccchhhHHHhhhh----cCCC-CCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCc--eeEEecc
Q psy890 1 MYILFYLVFPGDIAFRFLNYV----DKLP-PNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPR--LRFLEAN 73 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~----~~~~-~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d 73 (131)
++|+|+||++|.++..+...+ .+.. ..+....+..++..-|...+....+.+.++...... .. +.-+.++
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~---~~~f~~gvpgS 129 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVD---GVCFINGVPGS 129 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCT---TCEEEEEEESC
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccC---CCEEEEecchh
Confidence 368999999999988765542 1100 000001246899999999988888877765422100 01 2233444
Q ss_pred cccCCCCCCCeeEEEEccccccccCH---------------------------------HHHHHHHHHhccCCcEEEEEe
Q psy890 74 AEELPIESDSYSAYTIAFGIRNVTRI---------------------------------DKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 74 ~~~~~~~~~~~D~i~~~~~l~~~~~~---------------------------------~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+-.-.++.+++|+|++++++||+.+. ..+|+...+.|+|||++++.-
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 44445888999999999999998642 234888899999999998876
Q ss_pred ccCCCc
Q psy890 121 FSHVNN 126 (131)
Q Consensus 121 ~~~~~~ 126 (131)
.++...
T Consensus 210 ~gr~~~ 215 (359)
T 1m6e_X 210 LGRRSE 215 (359)
T ss_dssp EECSSS
T ss_pred ecCCCC
Confidence 665543
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.00 E-value=3.6e-10 Score=80.44 Aligned_cols=71 Identities=11% Similarity=-0.020 Sum_probs=59.2
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEEL-P 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~-~ 78 (131)
+|||+|||+|..+..+++. ..+|+++|+|+.++..+++++... +.. +++++..|+.+. +
T Consensus 96 ~VLDLgcG~G~~al~LA~~-------------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-----~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 96 KVVDLTGGLGIDFIALMSK-------------ASQGIYIERNDETAVAARHNIPLLLNEGK-----DVNILTGDFKEYLP 157 (410)
T ss_dssp EEEESSCSSSHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHHHHHHSCTTC-----EEEEEESCGGGSHH
T ss_pred EEEEeCCCchHHHHHHHhc-------------CCEEEEEECCHHHHHHHHHhHHHhccCCC-----cEEEEECcHHHhhh
Confidence 6899999999999887765 568999999999999999999876 542 899999998874 2
Q ss_pred -CCCCCeeEEEEc
Q psy890 79 -IESDSYSAYTIA 90 (131)
Q Consensus 79 -~~~~~~D~i~~~ 90 (131)
...++||+|++.
T Consensus 158 ~~~~~~fDvV~lD 170 (410)
T 3ll7_A 158 LIKTFHPDYIYVD 170 (410)
T ss_dssp HHHHHCCSEEEEC
T ss_pred hccCCCceEEEEC
Confidence 123579999995
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=2.5e-10 Score=76.82 Aligned_cols=76 Identities=12% Similarity=-0.019 Sum_probs=60.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH-------HHHHHHHHHhhhccCCCCCCCceeEEeccc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR-------AMLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 74 (131)
+|||+|||+|..+..++.. +.+|+++|+++ .+++.++++.+..+... +++++..|.
T Consensus 86 ~VLDlgcG~G~~a~~lA~~-------------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~----ri~~~~~d~ 148 (258)
T 2r6z_A 86 TVWDATAGLGRDSFVLASL-------------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAA----RINLHFGNA 148 (258)
T ss_dssp CEEETTCTTCHHHHHHHHT-------------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHT----TEEEEESCH
T ss_pred eEEEeeCccCHHHHHHHHh-------------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCcc----CeEEEECCH
Confidence 6899999999999998885 45899999999 99999988876654432 599999998
Q ss_pred ccC-C-CCC--CCeeEEEEccccc
Q psy890 75 EEL-P-IES--DSYSAYTIAFGIR 94 (131)
Q Consensus 75 ~~~-~-~~~--~~~D~i~~~~~l~ 94 (131)
.+. + ++. ++||+|++...+.
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHHhhhccCCCccEEEECCCCC
Confidence 764 2 333 6799999965443
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.90 E-value=3.7e-08 Score=72.55 Aligned_cols=109 Identities=10% Similarity=-0.003 Sum_probs=80.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--C-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~- 78 (131)
+|+|.+||+|.+...+++.+... ...+++|+|+++.++..|+.++...+... .+..+..+|.... +
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~--------~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~---~~~~I~~gDtL~~d~p~ 292 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQP--------QTVVYFGQELNTSTYNLARMNMILHGVPI---ENQFLHNADTLDEDWPT 292 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCT--------TTCEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEESCTTTSCSCC
T ss_pred EEeecccchhHHHHHHHHHHHhc--------cCceEEEEECcHHHHHHHHHHHHHcCCCc---CccceEecceecccccc
Confidence 69999999999998888876411 25689999999999999999887666531 1578888886654 3
Q ss_pred CCCCCeeEEEEcccc--cc-----------------cc---C-HHHHHHHHHHhcc-CCcEEEEEec
Q psy890 79 IESDSYSAYTIAFGI--RN-----------------VT---R-IDKALSEAYRVLK-PGGRFLCLEF 121 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l--~~-----------------~~---~-~~~~l~~~~~~L~-p~G~l~~~~~ 121 (131)
.....||+|+++-.. .+ ++ + --.++.++.+.|+ |||++.++-.
T Consensus 293 ~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 293 QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 345789999996332 11 00 0 1247999999999 9999877643
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.88 E-value=6.4e-09 Score=70.71 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=50.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCC-CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+|||+|||+|.++..+++... . ..+++++|+++.+++.++++. .. +++++.+|+.+++++
T Consensus 45 ~VLEIG~G~G~lt~~La~~~~----------~~~~~V~avDid~~~l~~a~~~~--~~-------~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 45 RMVEIGPGLGALTGPVIARLA----------TPGSPLHAVELDRDLIGRLEQRF--GE-------LLELHAGDALTFDFG 105 (279)
T ss_dssp EEEEECCTTSTTHHHHHHHHC----------BTTBCEEEEECCHHHHHHHHHHH--GG-------GEEEEESCGGGCCGG
T ss_pred EEEEEccccHHHHHHHHHhCC----------CcCCeEEEEECCHHHHHHHHHhc--CC-------CcEEEECChhcCChh
Confidence 699999999999999998743 1 245999999999999999883 22 899999999887653
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.86 E-value=9e-09 Score=75.85 Aligned_cols=115 Identities=8% Similarity=-0.149 Sum_probs=76.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCC----CCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTL----SEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 77 (131)
+|||.+||||.+...+++.+........ .......++|+|+++.++..|+.++...+... ++.+..+|....
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~----~i~i~~gDtL~~ 322 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDF----NFGKKNADSFLD 322 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCC----BCCSSSCCTTTS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCc----ccceeccchhcC
Confidence 5899999999998877665421000000 00003579999999999999999887766543 444467775443
Q ss_pred C-CCCCCeeEEEEcccccc-------------------------cc---C-HHHHHHHHHHhccCCcEEEEEe
Q psy890 78 P-IESDSYSAYTIAFGIRN-------------------------VT---R-IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~-~~~~~~D~i~~~~~l~~-------------------------~~---~-~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ....+||+|+++-.+.. .+ + --.++.++.+.|+|||++.++-
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 3 44578999999643321 11 1 1268999999999999987764
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.83 E-value=2e-08 Score=67.24 Aligned_cols=58 Identities=16% Similarity=0.171 Sum_probs=49.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+|||+|||+|.++..+++. +..+++++|+++.++..++++ . . .+++++.+|+.+++++
T Consensus 34 ~VLDiG~G~G~lt~~L~~~------------~~~~v~avEid~~~~~~~~~~-~-~-------~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 34 TVVEVGGGTGNLTKVLLQH------------PLKKLYVIELDREMVENLKSI-G-D-------ERLEVINEDASKFPFC 91 (249)
T ss_dssp EEEEEESCHHHHHHHHTTS------------CCSEEEEECCCHHHHHHHTTS-C-C-------TTEEEECSCTTTCCGG
T ss_pred EEEEEcCchHHHHHHHHHc------------CCCeEEEEECCHHHHHHHHhc-c-C-------CCeEEEEcchhhCChh
Confidence 6899999999999998875 147899999999999999877 2 1 2899999999888754
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.81 E-value=4.7e-09 Score=70.40 Aligned_cols=71 Identities=7% Similarity=-0.131 Sum_probs=53.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.++. + .... ..+++++|+++.++..++++..... +++++.+|+.+.+++.
T Consensus 24 ~VLEIG~G~G~lt~-l-~~~~-----------~~~v~avEid~~~~~~a~~~~~~~~-------~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 24 AMVEIGPGLAALTE-P-VGER-----------LDQLTVIELDRDLAARLQTHPFLGP-------KLTIYQQDAMTFNFGE 83 (252)
T ss_dssp CEEEECCTTTTTHH-H-HHTT-----------CSCEEEECCCHHHHHHHHTCTTTGG-------GEEEECSCGGGCCHHH
T ss_pred EEEEECCCCcHHHH-h-hhCC-----------CCeEEEEECCHHHHHHHHHHhccCC-------ceEEEECchhhCCHHH
Confidence 68999999999999 5 3311 2349999999999999998876533 8999999998876432
Q ss_pred -----CCeeEEEEccc
Q psy890 82 -----DSYSAYTIAFG 92 (131)
Q Consensus 82 -----~~~D~i~~~~~ 92 (131)
+..+.|+++..
T Consensus 84 ~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHHHTSCEEEEEECC
T ss_pred hhcccCCceEEEECCC
Confidence 23467776544
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.74 E-value=1.1e-08 Score=68.78 Aligned_cols=77 Identities=10% Similarity=-0.009 Sum_probs=56.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc--------CCCCCCCceeEEecc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF--------KVPVPNPRLRFLEAN 73 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d 73 (131)
+|||++||+|..+..++.. +.+|+++|.++.+...++++++... ... +++++..|
T Consensus 91 ~VLDl~~G~G~dal~lA~~-------------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~----~i~~~~~D 153 (258)
T 2oyr_A 91 DVVDATAGLGRDAFVLASV-------------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQE----RLQLIHAS 153 (258)
T ss_dssp CEEETTCTTCHHHHHHHHH-------------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHH----HEEEEESC
T ss_pred EEEEcCCcCCHHHHHHHHc-------------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhc----CEEEEECC
Confidence 6999999999999999886 4579999999988776666554221 111 78999999
Q ss_pred cccC-CCCCCCeeEEEEcccccc
Q psy890 74 AEEL-PIESDSYSAYTIAFGIRN 95 (131)
Q Consensus 74 ~~~~-~~~~~~~D~i~~~~~l~~ 95 (131)
..+. +...++||+|++.-....
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCC
T ss_pred HHHHHHhCcccCCEEEEcCCCCC
Confidence 7763 322246999999765544
No 282
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.72 E-value=4.7e-09 Score=88.06 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=58.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~ 79 (131)
|+|||+|.|+|..+..+++.+...+ ....+++..|+|+.+.+.++++++.. .+.....|.... ++
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~------~~~~~yt~td~s~~~~~~a~~~f~~~--------di~~~~~d~~~~~~~ 1307 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQP------VMDLDYTATDRNPQALEAAQAKLEQL--------HVTQGQWDPANPAPG 1307 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSS------SCEEEEEEECSSSSSTTTTTTTHHHH--------TEEEECCCSSCCCC-
T ss_pred ceEEEECCCccHHHHHHHHhhcccC------cccceEEEecCChHHHHHHHHHhhhc--------ccccccccccccccC
Confidence 4799999999999888877764110 01458999999998888888776542 233322343321 23
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
...+||+|++.+++|..++....|.++++.|||||++++.+.
T Consensus 1308 ~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1308 SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ----CCEEEEECC--------------------CCEEEEEEC
T ss_pred CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 456799999999999999999999999999999999988764
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.72 E-value=4.7e-09 Score=70.64 Aligned_cols=103 Identities=9% Similarity=-0.035 Sum_probs=63.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|||+|||+|.|+..+++..+ ...+.++|++.++.... ....... .++.....+++...++.
T Consensus 77 ~VLDLGaAPGGWSQvAa~~~~-----------~~~v~g~dVGvDl~~~p---i~~~~~g----~~ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 77 RVIDLGCGRGGWCYYAAAQKE-----------VSGVKGFTLGRDGHEKP---MNVQSLG----WNIITFKDKTDIHRLEP 138 (277)
T ss_dssp EEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCTTCCCC---CCCCBTT----GGGEEEECSCCTTTSCC
T ss_pred EEEEecCCCCHHHHHHHHhcC-----------CCcceeEEEeccCcccc---cccCcCC----CCeEEEeccceehhcCC
Confidence 689999999999998776532 45688888875321000 0000000 03333444444445667
Q ss_pred CCeeEEEEccccc----cccCH--HHHHHHHHHhccCC-cEEEEEecc
Q psy890 82 DSYSAYTIAFGIR----NVTRI--DKALSEAYRVLKPG-GRFLCLEFS 122 (131)
Q Consensus 82 ~~~D~i~~~~~l~----~~~~~--~~~l~~~~~~L~p~-G~l~~~~~~ 122 (131)
++||+|++..+.+ +.... ...+..+.++|+|| |.+++--+.
T Consensus 139 ~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 139 VKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 8899999987655 11111 12367778999999 999875444
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.71 E-value=4.3e-08 Score=65.88 Aligned_cols=114 Identities=13% Similarity=0.095 Sum_probs=68.9
Q ss_pred ceeeeecccchhhHHHhhhhcCC---CCCCCCCCCCCeEEEEeCCH---HHHH-----------HHHHHhhhc-------
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKL---PPNTLSEHCAPHVTVADINR---AMLD-----------VGEQRARDL------- 57 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~D~s~---~~~~-----------~~~~~~~~~------- 57 (131)
+|||+|+|+|..+..+++..... .+++. ....+++++|..+ +.+. .+++.....
T Consensus 63 ~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~--~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 63 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQ--LQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEESCCTTSHHHHHHHHHHHHHHHHCTTSS--CCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred EEEEECCChHHHHHHHHHHHHhhhhhCCCCC--cceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 69999999999988877654100 00000 0036899999776 4444 344443321
Q ss_pred ---cCCCCCCCceeEEeccccc-CC-CCC---CCeeEEEEcc-ccccccC--HHHHHHHHHHhccCCcEEEE
Q psy890 58 ---FKVPVPNPRLRFLEANAEE-LP-IES---DSYSAYTIAF-GIRNVTR--IDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 58 ---~~~~~~~~~~~~~~~d~~~-~~-~~~---~~~D~i~~~~-~l~~~~~--~~~~l~~~~~~L~p~G~l~~ 118 (131)
.+.+ ...+++++.+|+.+ ++ ... ..||+|+.-. .-..-++ ...++..+.+.|+|||++..
T Consensus 141 ~r~~~~~-~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 141 HRLLLDE-GRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEC---CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hheeccC-CceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0110 00256788888766 33 222 2799999843 2222223 25789999999999999875
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.70 E-value=6.7e-08 Score=65.70 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=78.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHH--------------------------HHHHHHHHhh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA--------------------------MLDVGEQRAR 55 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~--------------------------~~~~~~~~~~ 55 (131)
.|||+|+..|..+..++..+.... .+..+++++|..+. .++.++++++
T Consensus 109 ~IlEiGv~~G~Sai~ma~~l~~~g------~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 109 DLVETGVWRGGACILMRGILRAHD------VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTT------CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred cEEEeecCchHHHHHHHHHhHhcC------CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 589999999999888877653100 01568999996421 3567888888
Q ss_pred hccCCCCCCCceeEEecccccC-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 56 DLFKVPVPNPRLRFLEANAEEL-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 56 ~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
..++.. .+++++.+++.+. + .+.++||+|+.-... .......+..+.+.|+|||++++-++
T Consensus 183 ~~gl~~---~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 183 NYDLLD---EQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HTTCCS---TTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HcCCCc---CceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 877631 2899999997663 3 445689999987542 22345678999999999999987554
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.69 E-value=1.8e-07 Score=71.36 Aligned_cols=111 Identities=12% Similarity=-0.032 Sum_probs=71.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHH--HHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVG--EQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+|||.|||+|.+...+++.++.. ...+++|+|+++.++..| +.+......... -....+...|+....
T Consensus 324 rVLDPaCGSG~FLIaaA~~l~ei--------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG-i~~~~I~~dD~L~~~~ 394 (878)
T 3s1s_A 324 VISDPAAGSGNLLATVSAGFNNV--------MPRQIWANDIETLFLELLSIRLGLLFPQLVSS-NNAPTITGEDVCSLNP 394 (878)
T ss_dssp EEEETTCTTSHHHHHHHHTSTTC--------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT-TBCCEEECCCGGGCCG
T ss_pred EEEECCCCccHHHHHHHHHhccc--------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC-CCcceEEecchhcccc
Confidence 68999999999999888775311 135799999999999999 444432111100 002345555554432
Q ss_pred CCCCCeeEEEEcccccc-cc---------------------------C-HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 IESDSYSAYTIAFGIRN-VT---------------------------R-IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~-~~---------------------------~-~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.....||+|+++-.... .. + ...++.++.+.|+|||++.++-.
T Consensus 395 ~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 395 EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 23467999999654411 00 0 23468889999999999887643
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.67 E-value=4.3e-08 Score=68.98 Aligned_cols=105 Identities=14% Similarity=0.144 Sum_probs=75.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc---cCCCCCCCceeEEecccccCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL---FKVPVPNPRLRFLEANAEELP 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~ 78 (131)
+||-+|.|.|...+.++++ +..+++.+|+++.+++.+++.++.. ...+++.++++++..|....-
T Consensus 208 rVLIIGgGdG~~~revlkh------------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl 275 (381)
T 3c6k_A 208 DVLILGGGDGGILCEIVKL------------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 275 (381)
T ss_dssp EEEEEECTTCHHHHHHHTT------------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred eEEEECCCcHHHHHHHHhc------------CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHH
Confidence 5899999999999998876 2468999999999999999876532 222223346889999865431
Q ss_pred ----CCCCCeeEEEEcccccc---cc-------CHHHHHHHHHHhccCCcEEEE
Q psy890 79 ----IESDSYSAYTIAFGIRN---VT-------RIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 ----~~~~~~D~i~~~~~l~~---~~-------~~~~~l~~~~~~L~p~G~l~~ 118 (131)
-..++||+|+.-..-.. .+ -...+++.+++.|+|||+++.
T Consensus 276 ~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 276 KRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp HHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred HhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 23467999998532111 11 125678999999999999864
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.56 E-value=4.4e-07 Score=63.67 Aligned_cols=112 Identities=13% Similarity=0.178 Sum_probs=80.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCC-CCceeEEecccccCC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVP-NPRLRFLEANAEELP-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~-~ 79 (131)
+|||+++|+|.-+..++.... ...+++.|+++.-+...++++...+....+ ..++.+...|...++ .
T Consensus 151 ~VLD~CAaPGGKT~~la~~~~-----------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 151 IVLDLCAAPGGKTLALLQTGC-----------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp EEEESSCTTCHHHHHHHHTTC-----------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred EEEEecCCccHHHHHHHHhcC-----------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 699999999999988887643 467999999999999998888765432110 126788888877654 3
Q ss_pred CCCCeeEEEEcccccc--------ccC----------------HHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 80 ESDSYSAYTIAFGIRN--------VTR----------------IDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~--------~~~----------------~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
..+.||.|++-..+.. -++ -.++|.+..++|||||+++-..++-.
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 4578999997433221 010 13678888899999999987766643
No 289
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.42 E-value=3.6e-08 Score=66.51 Aligned_cols=103 Identities=12% Similarity=-0.000 Sum_probs=62.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
++|||+|||+|.|+..+++..+ ...+.++|++..+...+... ...+ .++.....+.....++
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~g-----------v~sV~GvdvG~d~~~~pi~~-~~~g------~~ii~~~~~~dv~~l~ 153 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKN-----------VKKVMAFTLGVQGHEKPIMR-TTLG------WNLIRFKDKTDVFNME 153 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCTTSCCCCCC-CBTT------GGGEEEECSCCGGGSC
T ss_pred CEEEEeCCCCCHHHHHHHHhcC-----------CCeeeeEEeccCcccccccc-ccCC------CceEEeeCCcchhhcC
Confidence 3689999999999998876543 45788999876432111100 0001 1233222222222345
Q ss_pred CCCeeEEEEccccccccC-----H--HHHHHHHHHhccCC--cEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTR-----I--DKALSEAYRVLKPG--GRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~-----~--~~~l~~~~~~L~p~--G~l~~~~~~ 122 (131)
..++|+|++..+.. ... . ...|.-+.++|+|| |.|++--+.
T Consensus 154 ~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 67899999977665 221 1 12366667899999 999875544
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.41 E-value=2e-07 Score=64.52 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=57.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 79 (131)
.++|..+|.|..+..+++.++ +..+|+++|.+++++..++ ++. . .+++++..++.++. +
T Consensus 60 iyVD~TlG~GGHS~~iL~~lg----------~~GrVig~D~Dp~Al~~A~-rL~----~----~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 60 IYIDGTFGRGGHSRLILSQLG----------EEGRLLAIDRDPQAIAVAK-TID----D----PRFSIIHGPFSALGEYV 120 (347)
T ss_dssp EEEESCCTTSHHHHHHHTTCC----------TTCEEEEEESCHHHHHHHT-TCC----C----TTEEEEESCGGGHHHHH
T ss_pred EEEEeCcCCCHHHHHHHHhCC----------CCCEEEEEECCHHHHHHHH-hhc----C----CcEEEEeCCHHHHHHHH
Confidence 579999999999999998875 4679999999999999884 441 1 28999999987763 1
Q ss_pred ---C-CCCeeEEEEccccc
Q psy890 80 ---E-SDSYSAYTIAFGIR 94 (131)
Q Consensus 80 ---~-~~~~D~i~~~~~l~ 94 (131)
. .+++|.|+...++.
T Consensus 121 ~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHTTCTTCEEEEEEECSCC
T ss_pred HhcCCCCcccEEEECCccC
Confidence 1 13689998766654
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.41 E-value=1.7e-06 Score=60.70 Aligned_cols=91 Identities=14% Similarity=0.133 Sum_probs=61.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
|++||+||.+|.|+..+++. +.+|+++|..+ +-. .+... ++++++..|......+
T Consensus 213 ~~vlDLGAaPGGWT~~l~~r-------------g~~V~aVD~~~-l~~----~l~~~-------~~V~~~~~d~~~~~~~ 267 (375)
T 4auk_A 213 MWAVDLGACPGGWTYQLVKR-------------NMWVYSVDNGP-MAQ----SLMDT-------GQVTWLREDGFKFRPT 267 (375)
T ss_dssp CEEEEETCTTCHHHHHHHHT-------------TCEEEEECSSC-CCH----HHHTT-------TCEEEECSCTTTCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHC-------------CCEEEEEEhhh-cCh----hhccC-------CCeEEEeCccccccCC
Confidence 57999999999999998875 67999999764 211 11111 2899999998887666
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCC---cEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG---GRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~---G~l~~~~ 120 (131)
..++|+|+|-... ++...+..+.+.+..+ +.++.+.
T Consensus 268 ~~~~D~vvsDm~~----~p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 268 RSNISWMVCDMVE----KPAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp SSCEEEEEECCSS----CHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred CCCcCEEEEcCCC----ChHHhHHHHHHHHhccccceEEEEEE
Confidence 6789999996643 3334444444444433 4544444
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.33 E-value=1.7e-06 Score=58.60 Aligned_cols=71 Identities=11% Similarity=0.026 Sum_probs=57.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
.+||.+||.|..+..+++. +.+|+++|.++.++..+++ +.. . +++++..++.++.
T Consensus 25 ~~VD~T~G~GGHS~~il~~-------------~g~VigiD~Dp~Ai~~A~~-L~~-~-------rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 25 VYVDATLGGAGHARGILER-------------GGRVIGLDQDPEAVARAKG-LHL-P-------GLTVVQGNFRHLKRHL 82 (285)
T ss_dssp EEEETTCTTSHHHHHHHHT-------------TCEEEEEESCHHHHHHHHH-TCC-T-------TEEEEESCGGGHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHC-------------CCEEEEEeCCHHHHHHHHh-hcc-C-------CEEEEECCcchHHHHH
Confidence 5799999999999999986 3589999999999999988 644 2 8999999988764
Q ss_pred --CCCCCeeEEEEccccc
Q psy890 79 --IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 --~~~~~~D~i~~~~~l~ 94 (131)
...+++|.|++..++.
T Consensus 83 ~~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 83 AALGVERVDGILADLGVS 100 (285)
T ss_dssp HHTTCSCEEEEEEECSCC
T ss_pred HHcCCCCcCEEEeCCccc
Confidence 2235799999865544
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.25 E-value=7.5e-07 Score=60.54 Aligned_cols=103 Identities=9% Similarity=-0.035 Sum_probs=61.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+++||+||++|.|+..+++..+ ...+.++|+...+...... ....+ .++.....+..-..+.
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~g-----------v~sV~Gvdlg~~~~~~P~~-~~~~~------~~iv~~~~~~di~~l~ 144 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQKE-----------VMSVKGYTLGIEGHEKPIH-MQTLG------WNIVKFKDKSNVFTMP 144 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTSTT-----------EEEEEEECCCCTTSCCCCC-CCBTT------GGGEEEECSCCTTTSC
T ss_pred CEEEEcCCCCCHHHHHHHHhcC-----------CceeeeEEecccccccccc-ccccC------CceEEeecCceeeecC
Confidence 3689999999999999987643 4578899986532100000 00000 0222222222222345
Q ss_pred CCCeeEEEEccccccccCH-------HHHHHHHHHhccCC-cEEEEEecc
Q psy890 81 SDSYSAYTIAFGIRNVTRI-------DKALSEAYRVLKPG-GRFLCLEFS 122 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~-------~~~l~~~~~~L~p~-G~l~~~~~~ 122 (131)
...+|+|++..+.. .... ...|.-+.++|+|| |.|++--+.
T Consensus 145 ~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 145 TEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 67899999976655 2211 23366667899999 999875544
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.18 E-value=2.8e-05 Score=57.22 Aligned_cols=114 Identities=11% Similarity=-0.041 Sum_probs=74.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCC--CCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSE--HCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+|+|.+||||.+...+.+++.+........ .....++|+|+++.++..++.++-..+.. ...+...|....+
T Consensus 220 ~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-----~~~I~~~dtL~~~~ 294 (530)
T 3ufb_A 220 SVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-----YPRIDPENSLRFPL 294 (530)
T ss_dssp CEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-----CCEEECSCTTCSCG
T ss_pred EEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-----cccccccccccCch
Confidence 699999999999888877765322110000 01246999999999999999887766644 3455666654433
Q ss_pred ---CCCCCeeEEEEccccccc--c-------------C-HHHHHHHHHHhcc-------CCcEEEEEe
Q psy890 79 ---IESDSYSAYTIAFGIRNV--T-------------R-IDKALSEAYRVLK-------PGGRFLCLE 120 (131)
Q Consensus 79 ---~~~~~~D~i~~~~~l~~~--~-------------~-~~~~l~~~~~~L~-------p~G~l~~~~ 120 (131)
.....||+|+++-.+... . + -..++..+.+.|| |||++.++-
T Consensus 295 ~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 295 REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 123479999996554211 0 1 1356788888886 699987753
No 295
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.14 E-value=3.3e-06 Score=51.81 Aligned_cols=85 Identities=8% Similarity=-0.013 Sum_probs=56.6
Q ss_pred ceeeeecccc-hhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+|||+|||+| +.+..|++.. +..|+++|+++..+. ++..|+.+....
T Consensus 38 rVlEVG~G~g~~vA~~La~~~------------g~~V~atDInp~Av~--------------------~v~dDiF~P~~~ 85 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHS------------KVDLVLTDIKPSHGG--------------------IVRDDITSPRME 85 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHS------------CCEEEEECSSCSSTT--------------------EECCCSSSCCHH
T ss_pred cEEEEccCCChHHHHHHHHhC------------CCeEEEEECCccccc--------------------eEEccCCCCccc
Confidence 6999999999 5888887642 678999999873332 566777663221
Q ss_pred C-CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 S-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
. +.||+|.+... .+++...+.++.+.. |.-+++..++.
T Consensus 86 ~Y~~~DLIYsirP---P~El~~~i~~lA~~v--~adliI~pL~~ 124 (153)
T 2k4m_A 86 IYRGAALIYSIRP---PAEIHSSLMRVADAV--GARLIIKPLTG 124 (153)
T ss_dssp HHTTEEEEEEESC---CTTTHHHHHHHHHHH--TCEEEEECBTT
T ss_pred ccCCcCEEEEcCC---CHHHHHHHHHHHHHc--CCCEEEEcCCC
Confidence 1 47999987543 446666666666543 44566655544
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.87 E-value=1.5e-05 Score=53.23 Aligned_cols=99 Identities=9% Similarity=-0.055 Sum_probs=57.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCc---eeEEec-cccc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPR---LRFLEA-NAEE 76 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-d~~~ 76 (131)
++|||+||++|.|+..+++..+ ...+.+.++..+. . ..+....+ .. +++... |+.+
T Consensus 75 ~~VVDLGaAPGGWSQvAa~~~~-----------vg~V~G~vig~D~-~----~~P~~~~~----~Gv~~i~~~~G~Df~~ 134 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAATMKN-----------VQEVRGYTKGGPG-H----EEPMLMQS----YGWNIVTMKSGVDVFY 134 (269)
T ss_dssp EEEEEETCTTSHHHHHHTTSTT-----------EEEEEEECCCSTT-S----CCCCCCCS----TTGGGEEEECSCCGGG
T ss_pred CEEEEcCCCCCHHHHHHhhhcC-----------CCCceeEEEcccc-c----cCCCcccC----CCceEEEeeccCCccC
Confidence 4799999999999998888622 1233444443211 0 00110000 02 355546 8876
Q ss_pred CCCCCCCeeEEEEccccccccC----H---HHHHHHHHHhccCCc-EEEEEecc
Q psy890 77 LPIESDSYSAYTIAFGIRNVTR----I---DKALSEAYRVLKPGG-RFLCLEFS 122 (131)
Q Consensus 77 ~~~~~~~~D~i~~~~~l~~~~~----~---~~~l~~~~~~L~p~G-~l~~~~~~ 122 (131)
. ...++|+|+|-.+-. ..+ - ..+|.-+.++|+||| -|++--+.
T Consensus 135 ~--~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 135 K--PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp S--CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred C--CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 3 345799999966543 221 1 125666778999999 77775544
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.86 E-value=3.8e-05 Score=53.80 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=47.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 77 (131)
.|||||+|.|.+|..|++... ..+++++|+++.++...++.. ... +++++..|+.++
T Consensus 61 ~VlEIGPG~G~LT~~Ll~~~~-----------~~~vvavE~D~~l~~~L~~~~-~~~-------~l~ii~~D~l~~ 117 (353)
T 1i4w_A 61 KVLDLYPGVGIQSAIFYNKYC-----------PRQYSLLEKRSSLYKFLNAKF-EGS-------PLQILKRDPYDW 117 (353)
T ss_dssp EEEEESCTTCHHHHHHHHHHC-----------CSEEEEECCCHHHHHHHHHHT-TTS-------SCEEECSCTTCH
T ss_pred EEEEECCCCCHHHHHHHhhCC-----------CCEEEEEecCHHHHHHHHHhc-cCC-------CEEEEECCccch
Confidence 599999999999999998643 468999999999999888776 222 899999998654
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.85 E-value=4.3e-05 Score=52.20 Aligned_cols=43 Identities=7% Similarity=0.022 Sum_probs=38.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 57 (131)
.|||++||+|..+..+++. +.+++++|+++.+++.+++++...
T Consensus 238 ~vlD~f~GsGt~~~~a~~~-------------g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 238 VVLDPFAGTGTTLIAAARW-------------GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp EEEETTCTTTHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHc-------------CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 6899999999998887664 578999999999999999998764
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.75 E-value=0.00015 Score=49.46 Aligned_cols=100 Identities=10% Similarity=-0.009 Sum_probs=62.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec-ccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA-NAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~ 80 (131)
.+||+||++|.|+..++...+ ..+|+++|+...--+.- ......++. -+.+... |+..++
T Consensus 97 ~VlDLGaapGGwsq~~~~~~g-----------v~~V~avdvG~~~he~P-~~~~ql~w~-----lV~~~~~~Dv~~l~-- 157 (321)
T 3lkz_A 97 KVIDLGCGRGGWCYYMATQKR-----------VQEVRGYTKGGPGHEEP-QLVQSYGWN-----IVTMKSGVDVFYRP-- 157 (321)
T ss_dssp EEEEETCTTCHHHHHHTTCTT-----------EEEEEEECCCSTTSCCC-CCCCBTTGG-----GEEEECSCCTTSSC--
T ss_pred EEEEeCCCCCcHHHHHHhhcC-----------CCEEEEEEcCCCCccCc-chhhhcCCc-----ceEEEeccCHhhCC--
Confidence 689999999999997777643 55899999866311000 000122221 3667665 665543
Q ss_pred CCCeeEEEEccccccccCH-------HHHHHHHHHhccCC-cEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRI-------DKALSEAYRVLKPG-GRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~-------~~~l~~~~~~L~p~-G~l~~~~~ 121 (131)
..++|+|+|-.+ ...+++ .+.|.-+.++|++| |-+.+--+
T Consensus 158 ~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 158 SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 366999999776 333332 23566667889988 77765333
No 300
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.72 E-value=3.5e-05 Score=50.97 Aligned_cols=99 Identities=9% Similarity=-0.024 Sum_probs=64.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec-ccccCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA-NAEELPI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~ 79 (131)
++|||+||++|.|+..++...+ ..+|+++|+...--+.- ......++. .++|... |+..++
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g-----------~~~V~avdvG~~ghe~P-~~~~s~gwn-----~v~fk~gvDv~~~~- 141 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKK-----------VTEVRGYTKGGPGHEEP-VPMSTYGWN-----IVKLMSGKDVFYLP- 141 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTT-----------EEEEEEECCCSTTSCCC-CCCCCTTTT-----SEEEECSCCGGGCC-
T ss_pred CEEEEcCCCCCcHHHHHHHhcC-----------CCEEEEEecCCCCccCc-chhhhcCcC-----ceEEEeccceeecC-
Confidence 4689999999999997777654 56899999866322100 011233443 6889888 865543
Q ss_pred CCCCeeEEEEcccccccc---CH---HHHHHHHHHhccCCcEEEEE
Q psy890 80 ESDSYSAYTIAFGIRNVT---RI---DKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~---~~---~~~l~~~~~~L~p~G~l~~~ 119 (131)
..++|.|+|-.+-..-. +. .+.|.-+.++|++ |-+.+-
T Consensus 142 -~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 142 -PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp -CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred -CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 36699999976652221 11 2356666788988 666553
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.62 E-value=0.00022 Score=48.35 Aligned_cols=98 Identities=6% Similarity=-0.077 Sum_probs=71.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-- 78 (131)
.+||+-+|||.+++.++.. ..+++.+|.++..+...++++.... +++++..|.... .
T Consensus 94 ~~LDlfaGSGaLgiEaLS~-------------~d~~vfvE~~~~a~~~L~~Nl~~~~-------~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRS-------------QDRLYLCELHPTEYNFLLKLPHFNK-------KVYVNHTDGVSKLNAL 153 (283)
T ss_dssp SSCCEEECHHHHHHHHSCT-------------TSEEEEECCSHHHHHHHTTSCCTTS-------CEEEECSCHHHHHHHH
T ss_pred CceeEeCCcHHHHHHHcCC-------------CCeEEEEeCCHHHHHHHHHHhCcCC-------cEEEEeCcHHHHHHHh
Confidence 4689999999999988773 5789999999999999999887522 899999995442 1
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHH--hccCCcEEEEE
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYR--VLKPGGRFLCL 119 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~--~L~p~G~l~~~ 119 (131)
-+..+||+|++--....-.+..+.+..+.+ .+.|+|++++.
T Consensus 154 ~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 154 LPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp CSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 233569999985544333345555555554 34688888764
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.34 E-value=0.00033 Score=46.87 Aligned_cols=43 Identities=14% Similarity=0.124 Sum_probs=37.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL 57 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 57 (131)
.|||..||+|..+..+.+. +.+++++|+++.+++.++++++..
T Consensus 215 ~vlD~f~GsGtt~~~a~~~-------------gr~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 215 LVLDCFMGSGTTAIVAKKL-------------GRNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp EEEESSCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHc-------------CCeEEEEeCCHHHHHHHHHHHHhc
Confidence 5899999999998877664 679999999999999999998754
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.28 E-value=0.0012 Score=45.08 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=59.5
Q ss_pred Cceeeeec------ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc
Q psy890 1 MYILFYLV------FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (131)
Q Consensus 1 ~~iLdig~------G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 74 (131)
|+|||+|+ .+|.+ +++.+. + .+..++++|+.+ +.. + .-.++.+|.
T Consensus 111 mrVLDLGA~s~kg~APGS~---VLr~~~--p-------~g~~VVavDL~~---------~~s----d----a~~~IqGD~ 161 (344)
T 3r24_A 111 MRVIHFGAGSDKGVAPGTA---VLRQWL--P-------TGTLLVDSDLND---------FVS----D----ADSTLIGDC 161 (344)
T ss_dssp CEEEEESCCCTTSBCHHHH---HHHHHS--C-------TTCEEEEEESSC---------CBC----S----SSEEEESCG
T ss_pred CEEEeCCCCCCCCCCCcHH---HHHHhC--C-------CCcEEEEeeCcc---------ccc----C----CCeEEEccc
Confidence 68999996 56663 444443 0 235899999966 111 1 124488886
Q ss_pred ccCCCCCCCeeEEEEcccccc-----ccC------HHHHHHHHHHhccCCcEEEEEeccCCC
Q psy890 75 EELPIESDSYSAYTIAFGIRN-----VTR------IDKALSEAYRVLKPGGRFLCLEFSHVN 125 (131)
Q Consensus 75 ~~~~~~~~~~D~i~~~~~l~~-----~~~------~~~~l~~~~~~L~p~G~l~~~~~~~~~ 125 (131)
.... ...+||+|++-..-.. ... -+.++.-+.+.|+|||-|++--+....
T Consensus 162 ~~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 162 ATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp GGEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred cccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 5432 2478999998543211 111 256677778899999999886555443
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.16 E-value=0.0052 Score=43.41 Aligned_cols=75 Identities=7% Similarity=0.016 Sum_probs=55.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
|+++|+-||.|.++.-+... +...+.++|+++.+++..+.++. ...++..|+.+..
T Consensus 3 ~~vidLFsG~GGlslG~~~a------------G~~~v~avE~d~~a~~t~~~N~~----------~~~~~~~DI~~~~~~ 60 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA------------GFDVKMAVEIDQHAINTHAINFP----------RSLHVQEDVSLLNAE 60 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH------------TCEEEEEECSCHHHHHHHHHHCT----------TSEEECCCGGGCCHH
T ss_pred CeEEEEccCcCHHHHHHHHC------------CCcEEEEEeCCHHHHHHHHHhCC----------CCceEecChhhcCHH
Confidence 57999999999999887665 23457899999999888877753 4566777877653
Q ss_pred -C-----CCCCeeEEEEcccccccc
Q psy890 79 -I-----ESDSYSAYTIAFGIRNVT 97 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l~~~~ 97 (131)
+ ....+|+|+....+..++
T Consensus 61 ~~~~~~~~~~~~D~i~ggpPCQ~fS 85 (376)
T 3g7u_A 61 IIKGFFKNDMPIDGIIGGPPCQGFS 85 (376)
T ss_dssp HHHHHHCSCCCCCEEEECCCCCTTC
T ss_pred HHHhhcccCCCeeEEEecCCCCCcc
Confidence 1 345799999876665543
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.12 E-value=0.0019 Score=44.35 Aligned_cols=109 Identities=13% Similarity=-0.038 Sum_probs=59.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH------------HHHHHHHHHhhhccCCCCCCCceeE
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR------------AMLDVGEQRARDLFKVPVPNPRLRF 69 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (131)
+|||+|-|+|.+.....+......+. ...+++.+|..+ +..+.....+....... -...+
T Consensus 99 ~IlE~GFGTGLNfl~t~~~~~~~~~~-----~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~---v~L~l 170 (308)
T 3vyw_A 99 RILDVGFGLGYNLAVALKHLWEVNPK-----LRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGER---LSLKV 170 (308)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHCTT-----CEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSS---EEEEE
T ss_pred EEEEeCCCccHHHHHHHHHHHHhCCC-----cceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCc---EEEEE
Confidence 69999999998865554432111100 134566666421 11222222222111110 02456
Q ss_pred EecccccC-C-CCCCCeeEEEEcccc-ccccCH--HHHHHHHHHhccCCcEEEE
Q psy890 70 LEANAEEL-P-IESDSYSAYTIAFGI-RNVTRI--DKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 70 ~~~d~~~~-~-~~~~~~D~i~~~~~l-~~~~~~--~~~l~~~~~~L~p~G~l~~ 118 (131)
..+|+.+. + +....+|+|+.-..- ..-|++ ..++.++.+.++|||.+.-
T Consensus 171 ~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 171 LLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp EESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred EechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 67776542 2 344579999885421 222222 5789999999999999864
No 306
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.00 E-value=0.014 Score=40.58 Aligned_cols=110 Identities=5% Similarity=-0.030 Sum_probs=72.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccC-----C----CC-------CCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFK-----V----PV-------PNP 65 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-----~----~~-------~~~ 65 (131)
.|+.+|||.......+....+ ...++=+|. ++.++.-++.+...+. . .. .+.
T Consensus 100 qVV~LGaGlDTr~~RL~~~~~-----------~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~ 167 (334)
T 1rjd_A 100 QVVNLGCGSDLRMLPLLQMFP-----------HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQG 167 (334)
T ss_dssp EEEEETCTTCCTHHHHHHHCT-----------TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECS
T ss_pred EEEEeCCCCccHHHHhcCcCC-----------CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCC
Confidence 479999999988887766422 467777776 6666666665554310 0 00 012
Q ss_pred ceeEEecccccCC--------C-CCCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 66 RLRFLEANAEELP--------I-ESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 66 ~~~~~~~d~~~~~--------~-~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
+..++..|+.+.. . ..+...++++-.++.+++ ....++..+.+.. |+|.+++.|...+
T Consensus 168 ~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 168 RYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp SEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred ceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 7889999987632 1 224568888888888886 4556677777665 7888877776554
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.71 E-value=0.0053 Score=42.75 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=52.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
++++|+.||.|.++..+...-. ....+.++|+++.+++..+.++. ...++..|+.++.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~----------~~~~v~~~E~d~~a~~~~~~N~~----------~~~~~~~Di~~~~~~ 62 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI----------PAQVVAAIDVNTVANEVYKYNFP----------HTQLLAKTIEGITLE 62 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC----------SEEEEEEECCCHHHHHHHHHHCT----------TSCEECSCGGGCCHH
T ss_pred CeEEEeCcCccHHHHHHHHCCC----------CceEEEEEeCCHHHHHHHHHhcc----------ccccccCCHHHccHh
Confidence 4689999999999888876510 02469999999999999888874 3345677777653
Q ss_pred -CCCCCeeEEEEccccccc
Q psy890 79 -IESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~ 96 (131)
++...+|+++....+..+
T Consensus 63 ~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 63 EFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp HHHHHCCSEEEECCC----
T ss_pred HcCcCCcCEEEEcCCCcch
Confidence 111258999987665444
No 308
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.53 E-value=0.0072 Score=42.85 Aligned_cols=51 Identities=14% Similarity=0.026 Sum_probs=37.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 56 (131)
.|+|+|+|+|.+...+++.+...+ . .....+++.+|+|+...+.-++++..
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p-~---~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLP-I---LYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSH-H---HHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred EEEEECCCcchHHHHHHHHHHhCC-c---cccccEEEEEecCHHHHHHHHHHhcC
Confidence 589999999999999988764111 0 00245899999999888877766644
No 309
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.47 E-value=0.027 Score=37.71 Aligned_cols=112 Identities=15% Similarity=0.056 Sum_probs=68.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEe-----CCH----------------------HHHHHHH---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVAD-----INR----------------------AMLDVGE--- 51 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D-----~s~----------------------~~~~~~~--- 51 (131)
.|+|+|+-.|..+..++.......+.+ ...+++++| +.. +.+....
T Consensus 72 ~ivE~GV~rG~S~~~~a~~~~~l~~~~----~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 72 VIMEFGVRFGRHLGTFAALRGVYEPYN----PLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHCTTC----TTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred eEEEEecccCHHHHHHHHHHHHhcccC----CCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 479999999988777654321000000 256899998 321 1111111
Q ss_pred HHhhhccCCCCCCCceeEEecccccC-C-----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEecc
Q psy890 52 QRARDLFKVPVPNPRLRFLEANAEEL-P-----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS 122 (131)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~d~~~~-~-----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~~ 122 (131)
++.+..+..+ .++.++.+++.+. + .+..++|+++.-... .......+..+...|+|||++++-++.
T Consensus 148 ~~~~~~g~~~---~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFFGHVT---QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTTTTSC---CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhcCCCC---CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 1112222211 3899999997764 2 234579999887642 234456788899999999999987764
No 310
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.40 E-value=0.027 Score=38.65 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=51.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 79 (131)
|++||+-||.|-++.-+-+. +...+.++|+++.+.+.-+.+.. ..++..|+.++..
T Consensus 1 mkvidLFsG~GG~~~G~~~a------------G~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~DI~~i~~~ 57 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA------------GFRIICANEYDKSIWKTYESNHS-----------AKLIKGDISKISSD 57 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT------------TCEEEEEEECCTTTHHHHHHHCC-----------SEEEESCGGGCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC------------CCEEEEEEeCCHHHHHHHHHHCC-----------CCcccCChhhCCHh
Confidence 78999999999888776543 24457899999988887776653 2456678777642
Q ss_pred CCCCeeEEEEccccccc
Q psy890 80 ESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~ 96 (131)
.-..+|+++....+..+
T Consensus 58 ~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 58 EFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp GSCCCSEEECCCCGGGT
T ss_pred hCCcccEEEecCCCCCc
Confidence 12358999886655544
No 311
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.35 E-value=0.012 Score=42.01 Aligned_cols=45 Identities=11% Similarity=-0.046 Sum_probs=37.9
Q ss_pred ceeeeecccchhhHHHh-hhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh
Q psy890 2 YILFYLVFPGDIAFRFL-NYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 56 (131)
+++|+|++.|..+..++ +..+ ...+++++|+++..+...+++++.
T Consensus 229 ~viDvGAn~G~~s~~~a~~~~~----------~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 229 KMVDCGASIGESLAGLIGVTKG----------KFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp EEEEETCTTSHHHHHHHHHHTS----------CCSEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHhcC----------CCCEEEEEcCCHHHHHHHHHHHHh
Confidence 68999999999999887 3432 237999999999999999998876
No 312
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.34 E-value=0.048 Score=37.71 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=50.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 79 (131)
++++|+.||.|.++..+... +...+.++|+++.+++..+.++.... ..|+.++..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~a------------G~~~v~~~e~d~~a~~t~~~N~~~~~------------~~Di~~~~~~ 67 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESC------------GAECVYSNEWDKYAQEVYEMNFGEKP------------EGDITQVNEK 67 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHT------------TCEEEEEECCCHHHHHHHHHHHSCCC------------BSCGGGSCGG
T ss_pred CcEEEECCCcCHHHHHHHHC------------CCeEEEEEeCCHHHHHHHHHHcCCCC------------cCCHHHcCHh
Confidence 46899999999998877654 24568899999999998888874311 456555431
Q ss_pred CCCCeeEEEEccccccc
Q psy890 80 ESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~ 96 (131)
.-..+|+|+....+..+
T Consensus 68 ~~~~~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 68 TIPDHDILCAGFPCQAF 84 (327)
T ss_dssp GSCCCSEEEEECCCTTT
T ss_pred hCCCCCEEEECCCCCCc
Confidence 11358999986555443
No 313
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.88 E-value=0.18 Score=34.57 Aligned_cols=102 Identities=12% Similarity=0.051 Sum_probs=66.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
|+++|||-=.-...+.. + ...+++-+| .+..+...++.+...+..+ +.+..++..|+.+ .
T Consensus 106 vV~LGaGlDTra~Rl~~--~----------~~~~v~evD-~P~vi~~k~~lL~~~~~~~--~~~~~~v~~Dl~d-~~~~~ 169 (310)
T 2uyo_A 106 FVILASGLDSRAYRLDW--P----------TGTTVYEID-QPKVLAYKSTTLAEHGVTP--TADRREVPIDLRQ-DWPPA 169 (310)
T ss_dssp EEEETCTTCCHHHHSCC--C----------TTCEEEEEE-CHHHHHHHHHHHHHTTCCC--SSEEEEEECCTTS-CHHHH
T ss_pred EEEeCCCCCchhhhccC--C----------CCcEEEEcC-CHHHHHHHHHHHHhcCCCC--CCCeEEEecchHh-hHHHH
Confidence 78899986443332221 1 247899999 5888888888876432111 1378889999876 3
Q ss_pred -----CCCCCeeEEEEcccccccc--CHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -----IESDSYSAYTIAFGIRNVT--RIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+..+.-=++++-.++++++ +...++..+...+.||+.+++-.
T Consensus 170 l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 170 LRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp HHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 2223445667777788876 45677888888888888886643
No 314
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.87 E-value=0.012 Score=40.65 Aligned_cols=44 Identities=5% Similarity=-0.120 Sum_probs=37.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF 58 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 58 (131)
.|||.-||+|.......+. +.+++++|+++..+..+++++....
T Consensus 255 ~VlDpF~GsGtt~~aa~~~-------------gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 255 LVVDIFGGSNTTGLVAERE-------------SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp EEEETTCTTCHHHHHHHHT-------------TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred EEEECCCCCCHHHHHHHHc-------------CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 5899999999987766654 6799999999999999999987654
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.81 E-value=0.047 Score=38.10 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=57.3
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEe--ccccc-C
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLE--ANAEE-L 77 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~-~ 77 (131)
+||-+|+|+ |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-. .+..+ .
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~-----~v-i~~~~~~~~~~~ 251 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG-----------ASIIIAVDIVESRLELAKQL----GAT-----HV-INSKTQDPVAAI 251 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT-----------CSEEEEEESCHHHHHHHHHH----TCS-----EE-EETTTSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEECCCHHHHHHHHHc----CCC-----EE-ecCCccCHHHHH
Confidence 577788765 777777777753 33799999999888777543 211 11 111 11110 1
Q ss_pred -CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....+.+|+|+-..+- ...+.+..+.|+++|+++++-
T Consensus 252 ~~~~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 252 KEITDGGVNFALESTGS------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HHHTTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHhcCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEeC
Confidence 0112379999875431 345788899999999998754
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.77 E-value=0.036 Score=39.14 Aligned_cols=96 Identities=18% Similarity=0.107 Sum_probs=58.9
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++.++.+++. + - ..+...-.+.
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----G-------a-~~i~~~~~~~~~~ 244 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLG-----------AACVIVGDQNPERLKLLSDA----G-------F-ETIDLRNSAPLRD 244 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-----------CSEEEEEESCHHHHHHHHTT----T-------C-EEEETTSSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEEcCCHHHHHHHHHc----C-------C-cEEcCCCcchHHH
Confidence 577888865 777888887753 33899999999877776532 2 1 1121111111
Q ss_pred ---CC-CCCCeeEEEEccccccc--------cCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ---PI-ESDSYSAYTIAFGIRNV--------TRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ---~~-~~~~~D~i~~~~~l~~~--------~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.. ....+|+|+-.-+-... ......+.+..+.|+++|+++++-
T Consensus 245 ~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 245 QIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 01 12369999876543211 012346788899999999987653
No 317
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.67 E-value=0.03 Score=40.23 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=38.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD 56 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 56 (131)
.|+|+|+|+|.+...+++.+..... ...+++.+|+|+...+.-++++..
T Consensus 140 ~ivE~GaG~GtLa~DiL~~l~~~~~------~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 140 RVMEFGAGTGKLAAGLLTALAALGV------ELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTC------CCSEEEEECTTSSSHHHHHHHHHH
T ss_pred eEEEeCCCccHHHHHHHHHHHhcCC------CCceEEEEEcCHHHHHHHHHHHhc
Confidence 6899999999999999988753211 124899999999888877777654
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.52 E-value=0.072 Score=36.96 Aligned_cols=76 Identities=16% Similarity=0.055 Sum_probs=51.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
++++|+-||.|.++.-+.+.-- ....+.++|+++.+.+..+.++. ...++..|+.++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~----------~~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~~DI~~~~~~ 63 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL----------DGEIVAAVDINTVANSVYKHNFP----------ETNLLNRNIQQLTPQ 63 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC----------SEEEEEEECCCHHHHHHHHHHCT----------TSCEECCCGGGCCHH
T ss_pred CEEEEECcCccHHHHHHHHcCC----------CceEEEEEeCCHHHHHHHHHhCC----------CCceeccccccCCHH
Confidence 3689999999999887765410 02458899999998888877764 2345566766653
Q ss_pred -CCCCCeeEEEEccccccc
Q psy890 79 -IESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~ 96 (131)
++...+|+++....+..+
T Consensus 64 ~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 64 VIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp HHHHTTCCEEEECCCCCCS
T ss_pred HhccCCCCEEEecCCCcch
Confidence 222368999876655444
No 319
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.47 E-value=0.049 Score=37.71 Aligned_cols=75 Identities=11% Similarity=0.068 Sum_probs=51.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeE-EEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHV-TVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
++++|+-||.|.++.-+.+.-- ....+ .++|+++.+.+..+.++... .+..|+.++.
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~----------~~~~v~~a~e~d~~a~~ty~~N~~~~-----------~~~~DI~~~~~ 69 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSI----------NINATFIPFDINEIANKIYSKNFKEE-----------VQVKNLDSISI 69 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSC----------CCCEEEEEECCCHHHHHHHHHHHCCC-----------CBCCCTTTCCH
T ss_pred CEEEEECCChhHHHHHHHHcCC----------CceEEEEEEECCHHHHHHHHHHCCCC-----------cccCChhhcCH
Confidence 3689999999999887765410 01346 79999999998888877431 3455666553
Q ss_pred --CCCCCeeEEEEccccccc
Q psy890 79 --IESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 79 --~~~~~~D~i~~~~~l~~~ 96 (131)
++...+|+++....+..+
T Consensus 70 ~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 70 KQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp HHHHHTCCCEEEECCCCTTC
T ss_pred HHhccCCCCEEEecCCccCc
Confidence 222368999987666555
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.45 E-value=0.013 Score=39.78 Aligned_cols=54 Identities=22% Similarity=0.382 Sum_probs=37.9
Q ss_pred ceeEEecccccC-C-CCCCCeeEEEEccccccc--------------------cCHHHHHHHHHHhccCCcEEEEE
Q psy890 66 RLRFLEANAEEL-P-IESDSYSAYTIAFGIRNV--------------------TRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 66 ~~~~~~~d~~~~-~-~~~~~~D~i~~~~~l~~~--------------------~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
+.+++++|..+. . +++++||+|+++-..... ..+...+.++.++|+|||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 568889997662 2 456789999995433211 11345678899999999998764
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.44 E-value=0.02 Score=39.52 Aligned_cols=44 Identities=11% Similarity=-0.056 Sum_probs=35.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH---HHHHHHHHHhhhcc
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR---AMLDVGEQRARDLF 58 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~---~~~~~~~~~~~~~~ 58 (131)
.|||.-||+|.......+. +.+++++|+++ ..++.+++++...+
T Consensus 245 ~vlDpF~GsGtt~~aa~~~-------------~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 245 TVLDFFAGSGVTARVAIQE-------------GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp EEEETTCTTCHHHHHHHHH-------------TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred EEEecCCCCCHHHHHHHHc-------------CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 5899999999988877665 67899999999 99999999987544
No 322
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.36 E-value=0.087 Score=39.76 Aligned_cols=115 Identities=14% Similarity=0.091 Sum_probs=65.8
Q ss_pred ceeeeecccchhhHHHhhhhcCC---CCCCCCCCCCCeEEEEeC---CHHHHHHHHHHhhh---------ccCCCCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKL---PPNTLSEHCAPHVTVADI---NRAMLDVGEQRARD---------LFKVPVP--- 63 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~D~---s~~~~~~~~~~~~~---------~~~~~~~--- 63 (131)
+|+|+|-|+|.+.....+..... ++... ....+++.+|. +.+.+..+...++. ..++...
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~--~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQ--LQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSS--CCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCC--CceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 68999999999987776664210 00000 02467999998 88777755442211 0111100
Q ss_pred --------CCceeEEecccccC-C-CC---CCCeeEEEEccccc-cccC--HHHHHHHHHHhccCCcEEEE
Q psy890 64 --------NPRLRFLEANAEEL-P-IE---SDSYSAYTIAFGIR-NVTR--IDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 64 --------~~~~~~~~~d~~~~-~-~~---~~~~D~i~~~~~l~-~~~~--~~~~l~~~~~~L~p~G~l~~ 118 (131)
.-.+++..+|+.+. + +. ...||.|+.-..-. .-++ -..++.++.+.++|||.+..
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 01234445554432 1 11 35799998844321 1122 25778999999999998764
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.15 E-value=0.12 Score=32.62 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=53.1
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccc---c
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAE---E 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~ 76 (131)
+||..|+ |.|.....+++.. +.+++++|.+++..+.+++ .+. ...+-..+.. .
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~------------G~~V~~~~~~~~~~~~~~~----~g~------~~~~d~~~~~~~~~ 98 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMI------------GARIYTTAGSDAKREMLSR----LGV------EYVGDSRSVDFADE 98 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHH------------TCEEEEEESSHHHHHHHHT----TCC------SEEEETTCSTHHHH
T ss_pred EEEEeeCCChHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHH----cCC------CEEeeCCcHHHHHH
Confidence 4677774 4455555555543 4689999999877665543 121 1111111110 0
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. . .....+|+++.+.+ ...+....+.|+|+|+++.+-
T Consensus 99 ~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred HHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 0 0 12246999987643 145788889999999998754
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.099 Score=36.81 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=58.9
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc----
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE---- 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---- 76 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-++.+++. + - ..+...-.+
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~G-----------a~~Vi~~~~~~~~~~~a~~l----G-------a-~~i~~~~~~~~~~ 244 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLLG-----------AAVVIVGDLNPARLAHAKAQ----G-------F-EIADLSLDTPLHE 244 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHT----T-------C-EEEETTSSSCHHH
T ss_pred EEEEECCcHHHHHHHHHHHHCC-----------CCeEEEEcCCHHHHHHHHHc----C-------C-cEEccCCcchHHH
Confidence 466678754 677777777643 34799999999887777532 2 1 111111000
Q ss_pred -C-C-CCCCCeeEEEEccccc---------cccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 -L-P-IESDSYSAYTIAFGIR---------NVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 -~-~-~~~~~~D~i~~~~~l~---------~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ . .....+|+|+-.-+-. +.++....+.+..+.|+++|+++++-
T Consensus 245 ~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 245 QIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 0 0 1124699998765432 12334457888999999999997753
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.80 E-value=0.27 Score=34.11 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=57.8
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec-----ccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA-----NAE 75 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 75 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-.+.+++. ... -+.+... ++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l-~~~--------~~~~~~~~~~~~~~~ 241 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG-----------ACPLVITDIDEGRLKFAKEI-CPE--------VVTHKVERLSAEESA 241 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-----------CCSEEEEESCHHHHHHHHHH-CTT--------CEEEECCSCCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHh-chh--------cccccccccchHHHH
Confidence 456677743 666777777643 33499999999888888765 211 2222211 111
Q ss_pred c-C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 76 E-L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 76 ~-~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+ . . .....+|+|+-..+ ....+....+.|+++|+++++-.
T Consensus 242 ~~v~~~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 242 KKIVESFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHHTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHHhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 0 0 0 12457999987543 12357788899999999987643
No 326
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.70 E-value=0.1 Score=39.53 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=65.5
Q ss_pred ceeeeecccchhhHHHhhhhcCC---CCCCCCCCCCCeEEEEeC---CHHHHHHHHHHhhh---------ccCCCCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKL---PPNTLSEHCAPHVTVADI---NRAMLDVGEQRARD---------LFKVPVP--- 63 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~D~---s~~~~~~~~~~~~~---------~~~~~~~--- 63 (131)
+|+|+|-|+|.+...+.+.+... .+... ....+++.+|. +.+.+..+...++. ..++...
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~--~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNAT--LRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSS--CCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCC--CceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 69999999999988777764211 11100 02368999998 66666654332211 0111100
Q ss_pred --------CCceeEEecccccC-C-CC---CCCeeEEEEcccccc-ccC--HHHHHHHHHHhccCCcEEEE
Q psy890 64 --------NPRLRFLEANAEEL-P-IE---SDSYSAYTIAFGIRN-VTR--IDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 64 --------~~~~~~~~~d~~~~-~-~~---~~~~D~i~~~~~l~~-~~~--~~~~l~~~~~~L~p~G~l~~ 118 (131)
.-.+++..+|+.+. + +. ...+|.++.-..--. -++ -..++.++.++++|||.+..
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 01345666675442 2 21 467999988443211 112 15778999999999998753
No 327
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.51 E-value=0.18 Score=34.55 Aligned_cols=90 Identities=14% Similarity=0.070 Sum_probs=53.7
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 77 (131)
++|-.|+ |.|.....+++.. +.+++++|.+++.++.++ .+ +. ...+-..+..+.
T Consensus 148 ~vlV~Ga~ggiG~~~~~~~~~~------------G~~V~~~~~~~~~~~~~~-~~---g~------~~~~d~~~~~~~~~ 205 (333)
T 1v3u_A 148 TVLVSAAAGAVGSVVGQIAKLK------------GCKVVGAAGSDEKIAYLK-QI---GF------DAAFNYKTVNSLEE 205 (333)
T ss_dssp EEEEESTTBHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHH-HT---TC------SEEEETTSCSCHHH
T ss_pred EEEEecCCCcHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHH-hc---CC------cEEEecCCHHHHHH
Confidence 4677776 4555555555543 568999999987777663 22 11 111111110111
Q ss_pred ---CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ---PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ---~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....+.+|+++.+.+- ..+.+..+.|+++|+++++-
T Consensus 206 ~~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEe
Confidence 0112479999887652 24678889999999998754
No 328
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.40 E-value=0.15 Score=34.74 Aligned_cols=73 Identities=7% Similarity=0.018 Sum_probs=49.1
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCe-EEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH-VTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
++++|+-||.|.++..+.+. + -... +.++|+++.+....+.+.. ...++..|+.++.
T Consensus 17 ~~vidLFaG~GG~~~g~~~a-G----------~~~~~v~a~E~d~~a~~ty~~N~~----------~~~~~~~DI~~i~~ 75 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDL-G----------IQVDRYIASEVCEDSITVGMVRHQ----------GKIMYVGDVRSVTQ 75 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHT-T----------BCEEEEEEECCCHHHHHHHHHHTT----------TCEEEECCGGGCCH
T ss_pred CEEEEeCcCccHHHHHHHHC-C----------CccceEEEEECCHHHHHHHHHhCC----------CCceeCCChHHccH
Confidence 36899999999988776554 1 0112 6999999988877766653 3455667777653
Q ss_pred --CC-CCCeeEEEEccccc
Q psy890 79 --IE-SDSYSAYTIAFGIR 94 (131)
Q Consensus 79 --~~-~~~~D~i~~~~~l~ 94 (131)
++ ...+|+++....+.
T Consensus 76 ~~i~~~~~~Dll~ggpPCQ 94 (295)
T 2qrv_A 76 KHIQEWGPFDLVIGGSPCN 94 (295)
T ss_dssp HHHHHTCCCSEEEECCCCG
T ss_pred HHhcccCCcCEEEecCCCc
Confidence 11 13689999865443
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.35 E-value=0.19 Score=34.68 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=54.4
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec---cccc-
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA---NAEE- 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~- 76 (131)
+||-+|+|+ |..+..+++..+ ..+++++|.+++-++.+++. +. ...+.. +..+
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-----------a~~Vi~~~~~~~~~~~~~~l----Ga-------~~vi~~~~~~~~~~ 226 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG-----------AGRIFAVGSRKHCCDIALEY----GA-------TDIINYKNGDIVEQ 226 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-----------CSSEEEECCCHHHHHHHHHH----TC-------CEEECGGGSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CcEEEEECCCHHHHHHHHHh----CC-------ceEEcCCCcCHHHH
Confidence 466677653 566666666542 33799999998877776543 21 111111 1111
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ . .....+|+|+-...- ...+....+.|+|+|+++.+-
T Consensus 227 v~~~t~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 227 ILKATDGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp HHHHTTTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHHcCCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 0 0 123469999875432 135677889999999998754
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.25 E-value=0.39 Score=28.54 Aligned_cols=91 Identities=11% Similarity=0.024 Sum_probs=54.0
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
|+=+| .|.++..+++.+.. .+.+++++|.+++.++.+++ . .+.++.+|..+..
T Consensus 10 viIiG--~G~~G~~la~~L~~---------~g~~v~vid~~~~~~~~~~~----~--------g~~~i~gd~~~~~~l~~ 66 (140)
T 3fwz_A 10 ALLVG--YGRVGSLLGEKLLA---------SDIPLVVIETSRTRVDELRE----R--------GVRAVLGNAANEEIMQL 66 (140)
T ss_dssp EEEEC--CSHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHH----T--------TCEEEESCTTSHHHHHH
T ss_pred EEEEC--cCHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHH----c--------CCCEEECCCCCHHHHHh
Confidence 44455 46787777777642 25689999999988776653 1 3556667755431
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..-..+|++++...-. .....+....+.+.|+..++..
T Consensus 67 a~i~~ad~vi~~~~~~---~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 67 AHLECAKWLILTIPNG---YEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp TTGGGCSEEEECCSCH---HHHHHHHHHHHHHCSSSEEEEE
T ss_pred cCcccCCEEEEECCCh---HHHHHHHHHHHHHCCCCeEEEE
Confidence 1224688887743211 1112234455667788776653
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.16 E-value=0.063 Score=36.97 Aligned_cols=54 Identities=19% Similarity=0.118 Sum_probs=38.2
Q ss_pred ceeEEeccccc-CC-CCCCCeeEEEEcccccc--------------ccCHHHHHHHHHHhccCCcEEEEE
Q psy890 66 RLRFLEANAEE-LP-IESDSYSAYTIAFGIRN--------------VTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 66 ~~~~~~~d~~~-~~-~~~~~~D~i~~~~~l~~--------------~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
+..++.+|..+ +. ++.++||+|++.-.... .......+.++.++|+|+|.+++.
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 57788888654 32 55678999999533211 113567889999999999998774
No 332
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.95 E-value=0.13 Score=35.58 Aligned_cols=87 Identities=9% Similarity=0.067 Sum_probs=55.0
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+||-+|+|. |..+..+++.. +.++++++.+++-.+.+++ .+.. .+ + .+...+ .
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~----lGa~-----~v--~-~~~~~~--~ 232 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAM------------GAEVSVFARNEHKKQDALS----MGVK-----HF--Y-TDPKQC--K 232 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHT------------TCEEEEECSSSTTHHHHHH----TTCS-----EE--E-SSGGGC--C
T ss_pred EEEEECCcHHHHHHHHHHHHC------------CCeEEEEeCCHHHHHHHHh----cCCC-----ee--c-CCHHHH--h
Confidence 456677754 66677777764 4689999999887776654 2211 12 2 232222 2
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+.+|+|+-..+-. ..+....+.|+++|+++++-.
T Consensus 233 -~~~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 -EELDFIISTIPTH------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp -SCEEEEEECCCSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred -cCCCEEEECCCcH------HHHHHHHHHHhcCCEEEEECC
Confidence 2799998754322 135677889999999987643
No 333
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.94 E-value=0.21 Score=34.59 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=55.2
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec-----ccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA-----NAE 75 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 75 (131)
+||-+|+|+ |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-.. +..
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~-----~v-i~~~~~~~~~~~ 232 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG-----------AAQVVVTDLSATRLSKAKEI----GAD-----LV-LQISKESPQEIA 232 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHT----TCS-----EE-EECSSCCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHh----CCC-----EE-EcCcccccchHH
Confidence 467788754 667777777642 33899999999877776532 211 11 1111 100
Q ss_pred -cC-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 76 -EL-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 76 -~~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.. ......+|+|+-.-+- ...+....+.|+++|+++.+-
T Consensus 233 ~~i~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 233 RKVEGQLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHHHHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHHHhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEe
Confidence 11 0111468999875431 235677889999999998754
No 334
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.92 E-value=0.51 Score=32.89 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=55.8
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-C-C
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-L-P 78 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~ 78 (131)
+||-.|+|. |..+..+++..+ ..+++++|.+++-.+.+++. +... -+.+...|..+ . .
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~~----vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG-----------ATTVILSTRQATKRRLAEEV----GATA----TVDPSAGDVVEAIAG 245 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEECSCHHHHHHHHHH----TCSE----EECTTSSCHHHHHHS
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHc----CCCE----EECCCCcCHHHHHHh
Confidence 455667643 666777777643 34899999999877776642 2110 01000111111 0 0
Q ss_pred ---CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ---IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ---~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...+.+|+|+-.-+ ....+..+.+.|+++|+++++-
T Consensus 246 ~~~~~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 246 PVGLVPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TTSSSTTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred hhhccCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEEe
Confidence 22347999987533 1345788889999999998754
No 335
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.82 E-value=0.28 Score=33.66 Aligned_cols=91 Identities=12% Similarity=0.046 Sum_probs=54.6
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+||-.|+ |.|.....+++.. +.++++++.+++.++.+++.+ +. ...+-..+..++.
T Consensus 158 ~vlI~Ga~g~iG~~~~~~a~~~------------G~~V~~~~~~~~~~~~~~~~~---g~------~~~~d~~~~~~~~~ 216 (345)
T 2j3h_A 158 TVYVSAASGAVGQLVGQLAKMM------------GCYVVGSAGSKEKVDLLKTKF---GF------DDAFNYKEESDLTA 216 (345)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHTS---CC------SEEEETTSCSCSHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHHc---CC------ceEEecCCHHHHHH
Confidence 4677776 4556666666653 468999999987777665332 21 1111111111110
Q ss_pred ----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.....+|+++.+.+- ..+....+.|+++|+++++-
T Consensus 217 ~~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHhCCCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEEc
Confidence 112469999876542 35788889999999988753
No 336
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.81 E-value=0.23 Score=34.10 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=55.5
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc-C
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE-L 77 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~-~ 77 (131)
+||-.|+|. |..+..+++.. +.+++++|.+++-.+.+++. +. ...+-..+ ..+ .
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga------~~~i~~~~~~~~~~~ 226 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAM------------GLRVAAVDIDDAKLNLARRL----GA------EVAVNARDTDPAAWL 226 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHHT----TC------SEEEETTTSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCeEEEEeCCHHHHHHHHHc----CC------CEEEeCCCcCHHHHH
Confidence 456678754 77777777764 46999999999887776542 21 11111111 100 0
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....+.+|+|+...+ ....+..+.+.|+++|+++++-
T Consensus 227 ~~~~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 227 QKEIGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HHHHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred HHhCCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeC
Confidence 001136898876532 2345788889999999998753
No 337
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.56 E-value=0.63 Score=27.45 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=42.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|+-+|+ |.++..+++.+.. .+.+++++|.+++.++.+++. ...++.+|..+..
T Consensus 8 ~v~I~G~--G~iG~~la~~L~~---------~g~~V~~id~~~~~~~~~~~~------------~~~~~~gd~~~~~~l~ 64 (141)
T 3llv_A 8 EYIVIGS--EAAGVGLVRELTA---------AGKKVLAVDKSKEKIELLEDE------------GFDAVIADPTDESFYR 64 (141)
T ss_dssp SEEEECC--SHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHT------------TCEEEECCTTCHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHH---------CCCeEEEEECCHHHHHHHHHC------------CCcEEECCCCCHHHHH
Confidence 4566666 6687777776642 256899999999877665431 3455666655421
Q ss_pred -CCCCCeeEEEEccc
Q psy890 79 -IESDSYSAYTIAFG 92 (131)
Q Consensus 79 -~~~~~~D~i~~~~~ 92 (131)
..-..+|.|+....
T Consensus 65 ~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 65 SLDLEGVSAVLITGS 79 (141)
T ss_dssp HSCCTTCSEEEECCS
T ss_pred hCCcccCCEEEEecC
Confidence 12346898887543
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.31 E-value=0.9 Score=29.02 Aligned_cols=93 Identities=8% Similarity=0.022 Sum_probs=56.0
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
|+|+=+|+ |..+..+++.+.+ .+.+++++|.+++.++...+.. ...++.+|..+..
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~---------~g~~v~vid~~~~~~~~l~~~~-----------~~~~i~gd~~~~~~l 58 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLS---------RKYGVVIINKDRELCEEFAKKL-----------KATIIHGDGSHKEIL 58 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHHS-----------SSEEEESCTTSHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHHHc-----------CCeEEEcCCCCHHHH
Confidence 66777775 7788888777642 2568999999998776544322 3456777765432
Q ss_pred --CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 79 --IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
..-..+|+|++...-. .....+....+.+.|...++.
T Consensus 59 ~~a~i~~ad~vi~~~~~d---~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 59 RDAEVSKNDVVVILTPRD---EVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHTCCTTCEEEECCSCH---HHHHHHHHHHHHTSCCCEEEE
T ss_pred HhcCcccCCEEEEecCCc---HHHHHHHHHHHHHcCCCeEEE
Confidence 1124679888753211 223344555555566666654
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.31 E-value=0.57 Score=32.26 Aligned_cols=90 Identities=14% Similarity=0.154 Sum_probs=54.3
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCC-eEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 77 (131)
+||-+|+| .|..+..+++.. +. ++++++.+++-++.+++. +.. . .+..+..++
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~------------Ga~~Vi~~~~~~~~~~~~~~~----Ga~-----~--~~~~~~~~~~~ 226 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKAS------------GAYPVIVSEPSDFRRELAKKV----GAD-----Y--VINPFEEDVVK 226 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------------TCCSEEEECSCHHHHHHHHHH----TCS-----E--EECTTTSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHHh----CCC-----E--EECCCCcCHHH
Confidence 46777774 356666666654 34 899999998877776532 111 1 111111110
Q ss_pred ---C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ---P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ---~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .....+|+|+..... ...+.++.+.|+++|+++.+-
T Consensus 227 ~v~~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 227 EVMDITDGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHHHHTTTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHcCCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 0 122469999876442 245678889999999988754
No 340
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.25 E-value=0.092 Score=36.03 Aligned_cols=91 Identities=9% Similarity=-0.102 Sum_probs=54.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE- 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~- 76 (131)
+||-.|+ |.|..+..+++.. +.++++++.+++-.+.+.+.+ +. ...+-..+ ..+
T Consensus 152 ~vlI~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~~---g~------~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 152 TVVISGAAGAVGSVAGQIARLK------------GCRVVGIAGGAEKCRFLVEEL---GF------DGAIDYKNEDLAAG 210 (336)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHTT---CC------SEEEETTTSCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHHc---CC------CEEEECCCHHHHHH
Confidence 4666776 4566666666653 569999999987777663322 21 11111111 100
Q ss_pred C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. ....+.+|+++.+.+- ..+..+.+.|+++|+++++-
T Consensus 211 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHhcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEe
Confidence 0 0113469999876542 36788889999999998753
No 341
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.23 E-value=0.13 Score=37.49 Aligned_cols=77 Identities=8% Similarity=0.027 Sum_probs=50.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI- 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 79 (131)
++++|+-||.|-++.-+.+. +...+.++|+++.+.+.-+.++.... ...++..|+.++..
T Consensus 89 ~~viDLFaG~GGlslG~~~a------------G~~~v~avE~d~~A~~ty~~N~~~~p-------~~~~~~~DI~~i~~~ 149 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI------------GGQCVFTSEWNKHAVRTYKANHYCDP-------ATHHFNEDIRDITLS 149 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT------------TEEEEEEECCCHHHHHHHHHHSCCCT-------TTCEEESCTHHHHCT
T ss_pred ceEEEecCCccHHHHHHHHC------------CCEEEEEEeCCHHHHHHHHHhcccCC-------Ccceeccchhhhhhc
Confidence 36899999999988777553 23458999999988887777763211 34455566654421
Q ss_pred ----------------CCCCeeEEEEccccccc
Q psy890 80 ----------------ESDSYSAYTIAFGIRNV 96 (131)
Q Consensus 80 ----------------~~~~~D~i~~~~~l~~~ 96 (131)
....+|+++....+..+
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 150 HQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp TCTTSCHHHHHHHHHHHSCCCSEEEEECCCCCC
T ss_pred cccccchhhHHhhhhhcCCCCCEEEecCCCcch
Confidence 11357999876665544
No 342
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.22 E-value=0.25 Score=34.38 Aligned_cols=90 Identities=14% Similarity=0.067 Sum_probs=54.9
Q ss_pred eeeee-c-ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec-cccc-C-
Q psy890 3 ILFYL-V-FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA-NAEE-L- 77 (131)
Q Consensus 3 iLdig-~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~-~- 77 (131)
||=.| + +.|..+..+++.+. +.++++++.+++-++.+++. +.. .+ +-.. +..+ .
T Consensus 175 VlV~Ga~G~vG~~a~qlak~~~-----------g~~Vi~~~~~~~~~~~~~~l----Gad-----~v-i~~~~~~~~~v~ 233 (363)
T 4dvj_A 175 ILIVGGAGGVGSIAVQIARQRT-----------DLTVIATASRPETQEWVKSL----GAH-----HV-IDHSKPLAAEVA 233 (363)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-----------CSEEEEECSSHHHHHHHHHT----TCS-----EE-ECTTSCHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHhc-----------CCEEEEEeCCHHHHHHHHHc----CCC-----EE-EeCCCCHHHHHH
Confidence 45555 3 44667777777643 67999999998877776542 211 11 1000 1110 0
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
....+.+|+|+-..+ ....+..+.+.|+++|+++++
T Consensus 234 ~~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 234 ALGLGAPAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp TTCSCCEEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred HhcCCCceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 123457999987433 234678888999999999876
No 343
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.04 E-value=0.38 Score=33.03 Aligned_cols=90 Identities=13% Similarity=0.024 Sum_probs=53.7
Q ss_pred ceeeeecc--cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc-
Q psy890 2 YILFYLVF--PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE- 76 (131)
Q Consensus 2 ~iLdig~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~- 76 (131)
+||-+|+| .|..+..+++.. +.++++++.+++-++.+++. +. ...+-..+ ..+
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~l----ga------~~~~~~~~~~~~~~ 204 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQIL------------NFRLIAVTRNNKHTEELLRL----GA------AYVIDTSTAPLYET 204 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH------------TCEEEEEESSSTTHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHhC----CC------cEEEeCCcccHHHH
Confidence 46677775 566777777764 46899999988877777652 21 11111111 110
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. . .....+|+|+...+-. ...+..+.|+++|+++++-
T Consensus 205 ~~~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 205 VMELTNGIGADAAIDSIGGP-------DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHHHTTTSCEEEEEESSCHH-------HHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCCCCcEEEECCCCh-------hHHHHHHHhcCCCEEEEEe
Confidence 0 0 1234799998765422 1233458899999998764
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.00 E-value=0.31 Score=33.86 Aligned_cols=90 Identities=12% Similarity=0.069 Sum_probs=54.9
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+||-+|+|. |..+..+++.. +.++++++.+++-++.+++. +. . ..+..+..++.
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga------~-~vi~~~~~~~~~~ 248 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKAT------------GAEVIVTSSSREKLDRAFAL----GA------D-HGINRLEEDWVER 248 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHHH----TC------S-EEEETTTSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEecCchhHHHHHHc----CC------C-EEEcCCcccHHHH
Confidence 466677643 66666677664 56899999998877776542 21 1 11111111110
Q ss_pred ----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 79 ----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
.....+|+|+-..+- ..+....+.|+++|+++++-.
T Consensus 249 v~~~~~g~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 249 VYALTGDRGADHILEIAGG-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp HHHHHTTCCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEECC
T ss_pred HHHHhCCCCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEec
Confidence 123479999876541 235677889999999987643
No 345
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.83 E-value=0.33 Score=33.91 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=53.7
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CC
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PI 79 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~ 79 (131)
+||-+|+|+ |..+..+++.. +.++++++.+++-++.+++ + +.. .+ +-..+.... ..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~------------Ga~Vi~~~~~~~~~~~a~~-l---Ga~-----~v-i~~~~~~~~~~~ 254 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAM------------GAHVVAFTTSEAKREAAKA-L---GAD-----EV-VNSRNADEMAAH 254 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESSGGGHHHHHH-H---TCS-----EE-EETTCHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHH-c---CCc-----EE-eccccHHHHHHh
Confidence 466678754 66667777664 4679999999888777764 2 211 11 111110000 11
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. ..+|+|+...+-. ..+....+.|+++|+++.+-
T Consensus 255 ~-~g~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 255 L-KSFDFILNTVAAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp T-TCEEEEEECCSSC------CCHHHHHTTEEEEEEEEECC
T ss_pred h-cCCCEEEECCCCH------HHHHHHHHHhccCCEEEEec
Confidence 1 4799998754421 12566778999999987653
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.72 E-value=0.11 Score=35.92 Aligned_cols=93 Identities=8% Similarity=0.008 Sum_probs=55.9
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCce-eEEe-cc-cccC
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRL-RFLE-AN-AEEL 77 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~d-~~~~ 77 (131)
+||-+|+|. |..+..+++... ++.++++++.+++-++.+++. +.. .+ .... .+ ....
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~----------~Ga~Vi~~~~~~~~~~~~~~l----Ga~-----~vi~~~~~~~~~~~~ 233 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALM----------KNITIVGISRSKKHRDFALEL----GAD-----YVSEMKDAESLINKL 233 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC----------TTCEEEEECSCHHHHHHHHHH----TCS-----EEECHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhc----------CCCEEEEEeCCHHHHHHHHHh----CCC-----EEeccccchHHHHHh
Confidence 467777743 666777777641 146799999999887777542 211 11 0000 11 0111
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. ....+|+|+..-+- ...+....+.|+++|+++.+-
T Consensus 234 ~-~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 234 T-DGLGASIAIDLVGT------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp H-TTCCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred h-cCCCccEEEECCCC------hHHHHHHHHHhhcCCEEEEeC
Confidence 1 12369999876442 235778889999999988753
No 347
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.70 E-value=0.4 Score=32.61 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=55.1
Q ss_pred eeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CC
Q psy890 3 ILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PI 79 (131)
Q Consensus 3 iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~ 79 (131)
||=.|+ +.|..+..+++.. +.++++++.+++-.+.+++. +. ...+-..+.... ..
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga------~~vi~~~~~~~~~~~ 207 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKL------------GYQVAAVSGRESTHGYLKSL----GA------NRILSRDEFAESRPL 207 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHT------------TCCEEEEESCGGGHHHHHHH----TC------SEEEEGGGSSCCCSS
T ss_pred EEEECCCcHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHhc----CC------CEEEecCCHHHHHhh
Confidence 455554 4566777777764 46899999998877777642 21 111111111111 12
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
....+|+|+-.-+ ...+.+..+.|+++|+++.+-
T Consensus 208 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 208 EKQLWAGAIDTVG-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp CCCCEEEEEESSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCccEEEECCC-------cHHHHHHHHHHhcCCEEEEEe
Confidence 3457999876533 126788899999999998753
No 348
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.68 E-value=0.038 Score=38.12 Aligned_cols=91 Identities=22% Similarity=0.188 Sum_probs=52.7
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCC-eEEEEeCCHHHHHHHHHHhhhccCCCCCCCce-eEEeccccc-C
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQRARDLFKVPVPNPRL-RFLEANAEE-L 77 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~ 77 (131)
+||-+|+| .|..+..+++.. +. ++++++.+++-++.+++. .. .+ .....++.+ .
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~------------Ga~~Vi~~~~~~~~~~~~~~l-a~---------~v~~~~~~~~~~~~ 224 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRAS------------GAGPILVSDPNPYRLAFARPY-AD---------RLVNPLEEDLLEVV 224 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------------TCCSEEEECSCHHHHGGGTTT-CS---------EEECTTTSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCCEEEEECCCHHHHHHHHHh-HH---------hccCcCccCHHHHH
Confidence 46777763 356666666664 45 899999988666555432 11 11 000001100 0
Q ss_pred -CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
......+|+|+...+- ...+.+..+.|+++|+++.+-
T Consensus 225 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 225 RRVTGSGVEVLLEFSGN------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHHSSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHhcCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 0113469999875442 245678889999999988753
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.60 E-value=0.76 Score=31.90 Aligned_cols=89 Identities=13% Similarity=0.042 Sum_probs=54.5
Q ss_pred ceeeee--cccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--
Q psy890 2 YILFYL--VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig--~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 77 (131)
+||-.| .|.|..+..+++.. +.++++++.+++-++.+++ .+. .. .+..+-.+.
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~------------Ga~Vi~~~~~~~~~~~~~~----~Ga------~~-~~~~~~~~~~~ 222 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKA------------KCHVIGTCSSDEKSAFLKS----LGC------DR-PINYKTEPVGT 222 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH----TTC------SE-EEETTTSCHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHhC------------CCEEEEEECCHHHHHHHHH----cCC------cE-EEecCChhHHH
Confidence 456666 35566666666664 4689999999877777654 121 11 111111110
Q ss_pred ---CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ---PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ---~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
......+|+|+...+- ..+..+.+.|+++|+++++-
T Consensus 223 ~~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 223 VLKQEYPEGVDVVYESVGG-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp HHHHHCTTCEEEEEECSCT-------HHHHHHHHHEEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEEe
Confidence 0112469999876542 46778889999999988754
No 350
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.46 E-value=0.26 Score=33.91 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=56.9
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-C-C
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-L-P 78 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~ 78 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-.+.+++. +.. .+.-...+..+ . .
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g-----------~~~Vi~~~~~~~~~~~~~~l----Ga~-----~~i~~~~~~~~~v~~ 233 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVS-----------AARVIAVDLDDDRLALAREV----GAD-----AAVKSGAGAADAIRE 233 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC-----------CCEEEEEESCHHHHHHHHHT----TCS-----EEEECSTTHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEEcCCHHHHHHHHHc----CCC-----EEEcCCCcHHHHHHH
Confidence 456667654 677777777753 67899999999887777542 211 11100111110 0 0
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.....+|+|+-.-+- ...+..+.+.|+++|+++++-
T Consensus 234 ~t~g~g~d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 234 LTGGQGATAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp HHGGGCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred HhCCCCCeEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 112369999875431 236788899999999998764
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.43 E-value=1.3 Score=31.25 Aligned_cols=92 Identities=10% Similarity=0.046 Sum_probs=52.0
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
+||=+|+| .|..+..+++..+ ..+++++|.+++-++.+++. +. . ..+..+-.++
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~~~~l----Ga------~-~vi~~~~~~~~~~ 273 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG-----------ASKVILSEPSEVRRNLAKEL----GA------D-HVIDPTKENFVEA 273 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEECSCHHHHHHHHHH----TC------S-EEECTTTSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEECCCHHHHHHHHHc----CC------C-EEEcCCCCCHHHH
Confidence 35556764 3566666676643 34899999999887777543 21 1 1111111111
Q ss_pred --C-CCCCCeeEEEEccccccccCHHHHHHHHHHhc----cCCcEEEEEe
Q psy890 78 --P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVL----KPGGRFLCLE 120 (131)
Q Consensus 78 --~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L----~p~G~l~~~~ 120 (131)
. .....+|+|+-.-+ .....+..+.+.| +++|+++++-
T Consensus 274 i~~~t~g~g~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 274 VLDYTNGLGAKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp HHHHTTTCCCSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred HHHHhCCCCCCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 0 12346999986433 2223445555556 9999998753
No 352
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.42 E-value=1.6 Score=29.27 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=60.9
Q ss_pred eeeeecccc-hhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+++| -+...+++.+-. .+.+|+.++.++...+.+.+.....+ ++.++..|+.+..
T Consensus 34 ~lVTGasg~~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~ 97 (293)
T 3grk_A 34 GLILGVANNRSIAWGIAKAARE---------AGAELAFTYQGDALKKRVEPLAEELG-------AFVAGHCDVADAASID 97 (293)
T ss_dssp EEEECCCSSSSHHHHHHHHHHH---------TTCEEEEEECSHHHHHHHHHHHHHHT-------CEEEEECCTTCHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHHhcC-------CceEEECCCCCHHHHH
Confidence 454555422 255555554421 36789999988765555554444433 6788888877642
Q ss_pred --C-----CCCCeeEEEEcccccc----------cc--C-----------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 --I-----ESDSYSAYTIAFGIRN----------VT--R-----------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 --~-----~~~~~D~i~~~~~l~~----------~~--~-----------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+ ..+..|+++.+.+... .. + .....+.+.+.|+.+|.++.+..
T Consensus 98 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 98 AVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1 1246899998876542 00 1 12345566677778888877653
No 353
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.37 E-value=0.87 Score=31.65 Aligned_cols=92 Identities=10% Similarity=-0.055 Sum_probs=54.8
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec----cccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA----NAEE 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~ 76 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-.. ++.+
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~-----~v-i~~~~~~~~~~~ 252 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG-----------ASRIIGVGTHKDKFPKAIEL----GAT-----EC-LNPKDYDKPIYE 252 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-----------CSEEEEECSCGGGHHHHHHT----TCS-----EE-ECGGGCSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEECCCHHHHHHHHHc----CCc-----EE-EecccccchHHH
Confidence 466677643 666777777653 33799999998877776532 211 11 1111 1110
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
. ....+.+|+|+-.-+- ...+....+.|+++ |+++.+-
T Consensus 253 ~i~~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 253 VICEKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 0 0112379999875432 34578888999999 9988754
No 354
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.35 E-value=0.53 Score=32.49 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=54.6
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
+||-+|+|. |..+..+++.. +.+++++|.+++-.+.+++. +. ...+-..+..+.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga------~~~~~~~~~~~~~~~ 228 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAY------------GAFVVCTARSPRRLEVAKNC----GA------DVTLVVDPAKEEESS 228 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHHT----TC------SEEEECCTTTSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEcCCHHHHHHHHHh----CC------CEEEcCcccccHHHH
Confidence 466677753 66677777764 45699999999877776532 21 111111110111
Q ss_pred -C--CC---CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -P--IE---SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~--~~---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .. ...+|+|+....- ...+....+.|+++|+++.+-
T Consensus 229 i~~~~~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 229 IIERIRSAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHHHHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHhccccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 0 11 2469999875431 235677889999999998754
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.25 E-value=0.71 Score=31.55 Aligned_cols=89 Identities=17% Similarity=0.254 Sum_probs=53.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+||-.|+ |-|..+..+++.. +.++++++.+++-++.+++. +. .. .+..+-.+..
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~----ga------~~-~~~~~~~~~~~ 207 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMK------------GAHTIAVASTDEKLKIAKEY----GA------EY-LINASKEDILR 207 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHT----TC------SE-EEETTTSCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHc----CC------cE-EEeCCCchHHH
Confidence 3566663 4556666666653 56899999998877766542 21 11 1111111110
Q ss_pred -----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.....+|+|+...+- ..+..+.+.|+++|+++.+-
T Consensus 208 ~~~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 208 QVLKFTNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp HHHHHTTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred HHHHHhCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 123469999876542 34677888999999998753
No 356
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.23 E-value=0.94 Score=31.45 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=54.7
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc----ccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN----AEE 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~ 76 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-..+ +.+
T Consensus 193 ~VlV~GaG~vG~~avqla~~~G-----------a~~Vi~~~~~~~~~~~~~~l----Ga~-----~v-i~~~~~~~~~~~ 251 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAG-----------ASRIIGVDINKDKFARAKEF----GAT-----EC-INPQDFSKPIQE 251 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-----------CSEEEEECSCGGGHHHHHHH----TCS-----EE-ECGGGCSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEEcCCHHHHHHHHHc----CCc-----eE-eccccccccHHH
Confidence 456677643 666777777653 33799999998877777532 211 11 11111 100
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
. ....+.+|+|+-.-+- ...+..+.+.|+++ |+++++-
T Consensus 252 ~v~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 252 VLIEMTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEe
Confidence 0 0112369999875432 34578888999999 9988754
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.02 E-value=0.62 Score=31.73 Aligned_cols=90 Identities=10% Similarity=0.023 Sum_probs=53.4
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccc---c
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAE---E 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~ 76 (131)
+||-.|+ |.|.....+++.. +.++++++.+++..+.+++. +. ...+-..+.. .
T Consensus 143 ~vlV~Ga~ggiG~~~~~~a~~~------------G~~V~~~~~~~~~~~~~~~~----g~------~~~~~~~~~~~~~~ 200 (327)
T 1qor_A 143 QFLFHAAAGGVGLIACQWAKAL------------GAKLIGTVGTAQKAQSALKA----GA------WQVINYREEDLVER 200 (327)
T ss_dssp EEEESSTTBHHHHHHHHHHHHH------------TCEEEEEESSHHHHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHc----CC------CEEEECCCccHHHH
Confidence 3566663 4555566666553 46899999998777776542 11 1111111110 0
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. . .....+|+++.+.+ ...+..+.+.|+++|+++++-
T Consensus 201 ~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 201 LKEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp HHHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 0 0 12346999988765 134677889999999988754
No 358
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.75 E-value=0.2 Score=34.68 Aligned_cols=91 Identities=8% Similarity=-0.065 Sum_probs=52.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCC-eEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAP-HVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~ 76 (131)
+||-.|+ |.|.....+++.. +. ++++++.+++-.+.+++.+ +. ...+-..+ ..+
T Consensus 163 ~vlI~GasggiG~~~~~~a~~~------------Ga~~Vi~~~~~~~~~~~~~~~~---g~------~~~~d~~~~~~~~ 221 (357)
T 2zb4_A 163 TMVVSGAAGACGSVAGQIGHFL------------GCSRVVGICGTHEKCILLTSEL---GF------DAAINYKKDNVAE 221 (357)
T ss_dssp EEEESSTTBHHHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHTS---CC------SEEEETTTSCHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCCeEEEEeCCHHHHHHHHHHc---CC------ceEEecCchHHHH
Confidence 3566665 4455555555543 45 8999999987766665422 21 11111111 000
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. ....+.+|+++.+.+ ...+....+.|+++|+++++-
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 0 011226999988665 256788889999999988753
No 359
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.64 E-value=0.81 Score=31.83 Aligned_cols=92 Identities=11% Similarity=0.032 Sum_probs=54.1
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc----ccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN----AEE 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~ 76 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-..+ +.+
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~G-----------a~~Vi~~~~~~~~~~~~~~l----Ga~-----~v-i~~~~~~~~~~~ 253 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAG-----------AKRIIAVDLNPDKFEKAKVF----GAT-----DF-VNPNDHSEPISQ 253 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEECSCGGGHHHHHHT----TCC-----EE-ECGGGCSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCEEEEEcCCHHHHHHHHHh----CCc-----eE-EeccccchhHHH
Confidence 456677643 566667777642 23799999998877776532 211 11 11111 100
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
. ....+.+|+|+-.-+- ...+..+.+.|+++ |+++++-
T Consensus 254 ~~~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 254 VLSKMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHHHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEc
Confidence 0 0112369999875432 34577888999999 9988753
No 360
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.62 E-value=0.18 Score=34.77 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=36.3
Q ss_pred ceeEE-ecccccC--CCCCCCeeEEEEcccc--c---------cccCHHHHHHHHHHhccCCcEEEEE
Q psy890 66 RLRFL-EANAEEL--PIESDSYSAYTIAFGI--R---------NVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 66 ~~~~~-~~d~~~~--~~~~~~~D~i~~~~~l--~---------~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
...++ .+|..+. .++.+++|+|++.-.. . +.......+.++.++|+|+|.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45666 8886542 2456789999994322 1 1113457788889999999998774
No 361
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.58 E-value=1.1 Score=31.24 Aligned_cols=92 Identities=11% Similarity=0.022 Sum_probs=53.8
Q ss_pred ceeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc----ccc
Q psy890 2 YILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN----AEE 76 (131)
Q Consensus 2 ~iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~ 76 (131)
+||-+|+|. |..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-..+ +.+
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G-----------a~~Vi~~~~~~~~~~~~~~l----Ga~-----~v-i~~~~~~~~~~~ 252 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG-----------AARIIGVDINKDKFAKAKEV----GAT-----EC-VNPQDYKKPIQE 252 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEECSCGGGHHHHHHT----TCS-----EE-ECGGGCSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEEcCCHHHHHHHHHh----CCc-----eE-ecccccchhHHH
Confidence 456677643 566666666642 23799999998877776532 211 11 11111 110
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
. ....+.+|+|+-.-.- ...+....+.|+++ |+++++-
T Consensus 253 ~~~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 253 VLTEMSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHHHTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHHHHhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEec
Confidence 0 0112369999875432 24567888999999 9988753
No 362
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.49 E-value=1.6 Score=29.73 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=55.0
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE- 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~- 76 (131)
+||-.|+ |.|..+..+++.. +.++++++.+++-++.+++. +. ...+-..+ ..+
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~----Ga------~~~~~~~~~~~~~~ 200 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKAL------------GAKLIGTVSSPEKAAHAKAL----GA------WETIDYSHEDVAKR 200 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH------------TCEEEEEESSHHHHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEEcCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHc----CC------CEEEeCCCccHHHH
Confidence 3555662 4566666677664 46899999999877777642 21 11111111 100
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
. . .....+|+|+...+- ..+....+.|+++|+++++-.
T Consensus 201 ~~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 201 VLELTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HHHHTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 0 0 123479999876542 246778899999999987643
No 363
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.48 E-value=0.44 Score=32.31 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=50.3
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+||-.|+| .|..+..+++.. +.++++++ +++-.+.+++. + -...+. |...+
T Consensus 145 ~VlV~GaG~vG~~a~qlak~~------------Ga~Vi~~~-~~~~~~~~~~l----G-------a~~v~~-d~~~v--- 196 (315)
T 3goh_A 145 EVLIVGFGAVNNLLTQMLNNA------------GYVVDLVS-ASLSQALAAKR----G-------VRHLYR-EPSQV--- 196 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCEEEEEC-SSCCHHHHHHH----T-------EEEEES-SGGGC---
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEE-ChhhHHHHHHc----C-------CCEEEc-CHHHh---
Confidence 46667773 367777777765 45899999 88777776542 2 111121 32222
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
...+|+|+-.-+-. .+.+..+.|+++|+++.+
T Consensus 197 ~~g~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 TQKYFAIFDAVNSQ-------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp CSCEEEEECC--------------TTGGGEEEEEEEEEE
T ss_pred CCCccEEEECCCch-------hHHHHHHHhcCCCEEEEE
Confidence 56799998654321 125567899999998876
No 364
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.42 E-value=0.98 Score=31.48 Aligned_cols=91 Identities=10% Similarity=0.076 Sum_probs=55.2
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--cccC-
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEEL- 77 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~- 77 (131)
+||-+|+| .|..+..+++..+ ..+++++|.+++-++.+++. +.. ..+... ..++
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~-------~vi~~~~~~~~~~ 253 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAG-----------ASRIIGIDIDSKKYETAKKF----GVN-------EFVNPKDHDKPIQ 253 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-----------CSCEEEECSCTTHHHHHHTT----TCC-------EEECGGGCSSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEEcCCHHHHHHHHHc----CCc-------EEEccccCchhHH
Confidence 45667774 3666777777653 34899999999877766532 211 111111 0111
Q ss_pred ----CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 78 ----PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 78 ----~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
....+.+|+|+-.-+- ...+....+.|+++ |+++++-
T Consensus 254 ~~i~~~~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 254 EVIVDLTDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHHHHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHhcCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEc
Confidence 0122379999875431 34578888999997 9988754
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.38 E-value=0.56 Score=32.26 Aligned_cols=88 Identities=17% Similarity=0.110 Sum_probs=54.0
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+||-.|+ |.|..+..+++.. +.++++++.+++-.+.+++. +. . ..+..+ .+..
T Consensus 162 ~VlV~Gasg~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~----ga------~-~v~~~~-~~~~~ 217 (342)
T 4eye_A 162 TVLVLGAAGGIGTAAIQIAKGM------------GAKVIAVVNRTAATEFVKSV----GA------D-IVLPLE-EGWAK 217 (342)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSGGGHHHHHHH----TC------S-EEEESS-TTHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHhc----CC------c-EEecCc-hhHHH
Confidence 4566665 4566677777664 56899999988877766642 21 1 111111 1110
Q ss_pred -----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.....+|+|+...+- ..+....+.|+++|+++++-
T Consensus 218 ~v~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 218 AVREATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHHHHTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 123469999876542 14677888999999998753
No 366
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.36 E-value=1 Score=27.04 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=54.7
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC-HHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
|+=+ |.|..+..+++.+.. .+.+++++|.+ ++..+...+..+. .+.++.+|..+..
T Consensus 6 vlI~--G~G~vG~~la~~L~~---------~g~~V~vid~~~~~~~~~~~~~~~~---------~~~~i~gd~~~~~~l~ 65 (153)
T 1id1_A 6 FIVC--GHSILAINTILQLNQ---------RGQNVTVISNLPEDDIKQLEQRLGD---------NADVIPGDSNDSSVLK 65 (153)
T ss_dssp EEEE--CCSHHHHHHHHHHHH---------TTCCEEEEECCCHHHHHHHHHHHCT---------TCEEEESCTTSHHHHH
T ss_pred EEEE--CCCHHHHHHHHHHHH---------CCCCEEEEECCChHHHHHHHHhhcC---------CCeEEEcCCCCHHHHH
Confidence 4444 458888888877642 25689999997 4444444333221 4667777765431
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..-+.+|+|++...- ......+....+.+.|...++..
T Consensus 66 ~a~i~~ad~vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 66 KAGIDRCRAILALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHTTTTCSEEEECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred HcChhhCCEEEEecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 113468888875421 12334455556666677776553
No 367
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=91.33 E-value=0.15 Score=30.66 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHhhhccCCCCCCCceeEEecc-cc--cCCCCCCCeeEEEEccccc-ccc-CHHHHHHHHHHhccCCcEEE
Q psy890 43 NRAMLDVGEQRARDLFKVPVPNPRLRFLEAN-AE--ELPIESDSYSAYTIAFGIR-NVT-RIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~--~~~~~~~~~D~i~~~~~l~-~~~-~~~~~l~~~~~~L~p~G~l~ 117 (131)
.++.++.++...... .+ ..+...-.| +. ...++.+.||.|+....-. ... -+...+..+.+.|||||.|.
T Consensus 21 ~pe~le~~k~~~~~~--~~---~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~ 95 (136)
T 2km1_A 21 TPELVENTKAQAASK--KV---KFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLI 95 (136)
T ss_dssp SHHHHHHHHHHHHHT--TE---EEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEE
T ss_pred CHHHHHHHHHhhhcc--cc---chhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEE
Confidence 356666666555442 00 023333333 22 2246788999998754333 212 23788999999999999986
Q ss_pred E
Q psy890 118 C 118 (131)
Q Consensus 118 ~ 118 (131)
-
T Consensus 96 g 96 (136)
T 2km1_A 96 G 96 (136)
T ss_dssp C
T ss_pred e
Confidence 3
No 368
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.07 E-value=0.46 Score=32.73 Aligned_cols=91 Identities=8% Similarity=0.007 Sum_probs=54.0
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+||-.|+ |.|.....+++.. +.++++++.+++..+.+++. +. ...+-..+..+..
T Consensus 172 ~vlV~Ga~ggiG~~~~~~a~~~------------Ga~V~~~~~~~~~~~~~~~~----g~------~~~~d~~~~~~~~~ 229 (347)
T 2hcy_A 172 WVAISGAAGGLGSLAVQYAKAM------------GYRVLGIDGGEGKEELFRSI----GG------EVFIDFTKEKDIVG 229 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------------TCEEEEEECSTTHHHHHHHT----TC------CEEEETTTCSCHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC------------CCcEEEEcCCHHHHHHHHHc----CC------ceEEecCccHhHHH
Confidence 4677787 4556666666653 46899999888776665431 21 1111111111110
Q ss_pred ----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
...+.+|+|+.+.+. ...+..+.+.|+++|+++.+-
T Consensus 230 ~~~~~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 230 AVLKATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHHHHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHHHHhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEe
Confidence 111269999876542 246788889999999988754
No 369
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.99 E-value=1.3 Score=31.67 Aligned_cols=93 Identities=9% Similarity=0.033 Sum_probs=58.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
.|+=+| .|..+..+++.+.. .+..|+++|.+++.++.+++. .+.++.+|..+..
T Consensus 6 ~viIiG--~Gr~G~~va~~L~~---------~g~~vvvId~d~~~v~~~~~~------------g~~vi~GDat~~~~L~ 62 (413)
T 3l9w_A 6 RVIIAG--FGRFGQITGRLLLS---------SGVKMVVLDHDPDHIETLRKF------------GMKVFYGDATRMDLLE 62 (413)
T ss_dssp SEEEEC--CSHHHHHHHHHHHH---------TTCCEEEEECCHHHHHHHHHT------------TCCCEESCTTCHHHHH
T ss_pred eEEEEC--CCHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHhC------------CCeEEEcCCCCHHHHH
Confidence 355555 57788888777642 257899999999888876531 3456677766532
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..-+.+|+|++...- ......+....+.+.|+..++..-
T Consensus 63 ~agi~~A~~viv~~~~---~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 63 SAGAAKAEVLINAIDD---PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp HTTTTTCSEEEECCSS---HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hcCCCccCEEEECCCC---hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 223568888774321 122344556667778887776643
No 370
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.91 E-value=0.68 Score=32.36 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=53.8
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec------cc
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA------NA 74 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~ 74 (131)
+||-+|+| .|..+..+++..+ ..++++++.+++-++.+++ .+. . ..+.. ++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~~~~----lGa------~-~vi~~~~~~~~~~ 255 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLG-----------AENVIVIAGSPNRLKLAEE----IGA------D-LTLNRRETSVEER 255 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------BSEEEEEESCHHHHHHHHH----TTC------S-EEEETTTSCHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcC-----------CceEEEEcCCHHHHHHHHH----cCC------c-EEEeccccCcchH
Confidence 46667743 3566666666632 2589999999987777653 221 1 11111 11
Q ss_pred c-cC-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 75 E-EL-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 75 ~-~~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .. . .....+|+|+-.-+- ...+....+.|+++|+++.+-
T Consensus 256 ~~~v~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 256 RKAIMDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHHHHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 01 0 122369999875432 124677889999999988753
No 371
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.86 E-value=1.9 Score=29.54 Aligned_cols=90 Identities=9% Similarity=-0.028 Sum_probs=54.6
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecc--ccc-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEAN--AEE- 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~- 76 (131)
+||-.|+ |.|.....+++.. +.++++++.+++.++.+++. +. ...+-..+ ..+
T Consensus 169 ~vlV~Gasg~iG~~~~~~a~~~------------G~~Vi~~~~~~~~~~~~~~~----ga------~~~~d~~~~~~~~~ 226 (343)
T 2eih_A 169 DVLVMAAGSGVSVAAIQIAKLF------------GARVIATAGSEDKLRRAKAL----GA------DETVNYTHPDWPKE 226 (343)
T ss_dssp EEEECSTTSTTHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHH----TC------SEEEETTSTTHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHhc----CC------CEEEcCCcccHHHH
Confidence 4677776 4566666666653 46899999998887777532 21 11111111 000
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. . .....+|+|+...+ . ..+..+.+.|+++|+++.+-
T Consensus 227 ~~~~~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp HHHHTTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred HHHHhCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 0 0 12347999988765 2 23567788899999987753
No 372
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.75 E-value=0.3 Score=33.57 Aligned_cols=87 Identities=16% Similarity=0.238 Sum_probs=53.6
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+||-+|+| .|..+..+++.. +.++++++.+++-++.+++ + +. . ..+ |..+..
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~-l---Ga------~-~~~--d~~~~~~~ 221 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAM------------GLNVVAVDIGDEKLELAKE-L---GA------D-LVV--NPLKEDAA 221 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------------TCEEEEECSCHHHHHHHHH-T---TC------S-EEE--CTTTSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHH-C---CC------C-EEe--cCCCccHH
Confidence 46777774 355566666653 4689999999987777653 1 21 1 111 211100
Q ss_pred -----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.. ..+|+|+...+. ...+.+..+.|+++|+++.+-
T Consensus 222 ~~~~~~~-~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 222 KFMKEKV-GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHHHHHH-SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHh-CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEec
Confidence 11 469999875542 245678889999999988753
No 373
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.75 E-value=1.1 Score=31.19 Aligned_cols=92 Identities=12% Similarity=0.037 Sum_probs=53.8
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec----cccc
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA----NAEE 76 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~ 76 (131)
+||-+|+| .|..+..+++..+ ..+++++|.+++-++.+++. +.. .+ +-.. ++.+
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G-----------a~~Vi~~~~~~~~~~~a~~l----Ga~-----~v-i~~~~~~~~~~~ 256 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAG-----------ASRIIAIDINGEKFPKAKAL----GAT-----DC-LNPRELDKPVQD 256 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEECSCGGGHHHHHHT----TCS-----EE-ECGGGCSSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-----------CCeEEEEcCCHHHHHHHHHh----CCc-----EE-EccccccchHHH
Confidence 45667764 3566666776642 33799999998877776532 211 11 1111 1100
Q ss_pred -C-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC-cEEEEEe
Q psy890 77 -L-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG-GRFLCLE 120 (131)
Q Consensus 77 -~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~-G~l~~~~ 120 (131)
. ....+.+|+|+-.-+- ...+....+.|+++ |+++++-
T Consensus 257 ~v~~~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 257 VITELTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHHHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 0 0112369999865432 34578888999999 9988754
No 374
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.71 E-value=1.2 Score=30.83 Aligned_cols=89 Identities=11% Similarity=0.021 Sum_probs=52.5
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 77 (131)
+||-.|+ |.|.....+++.. +.++++++.+++..+.+++. +. .. .+..+-.+.
T Consensus 173 ~vlV~GasggiG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~----ga------~~-~~d~~~~~~~~ 229 (351)
T 1yb5_A 173 SVLVHGASGGVGLAACQIARAY------------GLKILGTAGTEEGQKIVLQN----GA------HE-VFNHREVNYID 229 (351)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHT----TC------SE-EEETTSTTHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC------------CCEEEEEeCChhHHHHHHHc----CC------CE-EEeCCCchHHH
Confidence 3566665 4455555565553 56899999998777755432 21 11 111111110
Q ss_pred --C--CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 --P--IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 --~--~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .....+|+++.+.+- ..+.+..+.|+++|+++++-
T Consensus 230 ~~~~~~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 230 KIKKYVGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHHHCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHcCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 0 122469999876542 34677889999999988754
No 375
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.68 E-value=0.87 Score=31.48 Aligned_cols=91 Identities=12% Similarity=0.017 Sum_probs=51.1
Q ss_pred ceeeeecc-cchhh-HHHh-hhhcCCCCCCCCCCCCCe-EEEEeCCHH---HHHHHHHHhhhccCCCCCCCceeEEeccc
Q psy890 2 YILFYLVF-PGDIA-FRFL-NYVDKLPPNTLSEHCAPH-VTVADINRA---MLDVGEQRARDLFKVPVPNPRLRFLEANA 74 (131)
Q Consensus 2 ~iLdig~G-~G~~~-~~l~-~~~~~~~~~~~~~~~~~~-~~~~D~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 74 (131)
+||-+|+| .|..+ ..++ +.. +.+ +++++.+++ -.+.+++. +.. .+.+...+.
T Consensus 175 ~VlV~GaG~vG~~a~iqla~k~~------------Ga~~Vi~~~~~~~~~~~~~~~~~l----Ga~-----~v~~~~~~~ 233 (357)
T 2b5w_A 175 SAFVLGNGSLGLLTLAMLKVDDK------------GYENLYCLGRRDRPDPTIDIIEEL----DAT-----YVDSRQTPV 233 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTT------------CCCEEEEEECCCSSCHHHHHHHHT----TCE-----EEETTTSCG
T ss_pred EEEEECCCHHHHHHHHHHHHHHc------------CCcEEEEEeCCcccHHHHHHHHHc----CCc-----ccCCCccCH
Confidence 46677763 34555 5566 543 344 999998876 66666531 210 110000011
Q ss_pred ccC-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 75 EEL-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 75 ~~~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+. .. .+.+|+|+-.-+- ...+.++.+.|+++|+++.+-
T Consensus 234 ~~i~~~-~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 234 EDVPDV-YEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GGHHHH-SCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHh-CCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEe
Confidence 110 01 1369999865431 235778889999999988754
No 376
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.62 E-value=0.18 Score=35.28 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=40.8
Q ss_pred CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCCCCeeEEEEccccccccCHHHHHHHHHHhccCC
Q psy890 34 APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPG 113 (131)
Q Consensus 34 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~ 113 (131)
+.+++++|.+++-.+.+.+.... .+.....+...+...-..+|+|+..-.......+.-......+.|+|+
T Consensus 190 Ga~V~v~dr~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g 260 (361)
T 1pjc_A 190 GAQVQIFDINVERLSYLETLFGS---------RVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTG 260 (361)
T ss_dssp TCEEEEEESCHHHHHHHHHHHGG---------GSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTT
T ss_pred CCEEEEEeCCHHHHHHHHHhhCc---------eeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCC
Confidence 45899999999877777654432 221111111111000125899987654432111111123456778999
Q ss_pred cEEEEE
Q psy890 114 GRFLCL 119 (131)
Q Consensus 114 G~l~~~ 119 (131)
|+++-+
T Consensus 261 ~~ivdv 266 (361)
T 1pjc_A 261 SVIVDV 266 (361)
T ss_dssp CEEEET
T ss_pred CEEEEE
Confidence 987654
No 377
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.49 E-value=1.4 Score=29.57 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=61.2
Q ss_pred eeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+++ ..+...+++.+-. .+.+|+.++.++...+...+.....+ .+.++..|+.+..
T Consensus 33 vlVTGasg~~GIG~~ia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~ 96 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCA---------QGAEVALTYLSETFKKRVDPLAESLG-------VKLTVPCDVSDAESVD 96 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHHHHT-------CCEEEECCTTCHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHH---------CCCEEEEEeCChHHHHHHHHHHHhcC-------CeEEEEcCCCCHHHHH
Confidence 45555543 2455555555431 36789999998765555555444443 5677888877642
Q ss_pred --CC-----CCCeeEEEEccccccc----------c--C-----------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 --IE-----SDSYSAYTIAFGIRNV----------T--R-----------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 --~~-----~~~~D~i~~~~~l~~~----------~--~-----------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+. -+.+|+++.+.+.... + + .....+.+.+.|+.+|.++.+..
T Consensus 97 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 97 NMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 11 1468999988765421 0 1 12344556677777888887653
No 378
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.47 E-value=0.31 Score=33.92 Aligned_cols=92 Identities=13% Similarity=0.140 Sum_probs=50.4
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+||-+|+| .|..+..+++.. +.++++++.+++-.+.+++.+ +. ...+-..+.......
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~------------Ga~Vi~~~~~~~~~~~~~~~l---Ga------~~v~~~~~~~~~~~~ 248 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAF------------GSKVTVISTSPSKKEEALKNF---GA------DSFLVSRDQEQMQAA 248 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------------TCEEEEEESCGGGHHHHHHTS---CC------SEEEETTCHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHhc---CC------ceEEeccCHHHHHHh
Confidence 35556653 245555666553 468999999887666655332 21 111111111111101
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+.+|+|+...+... .+....+.|+++|+++.+-
T Consensus 249 ~~~~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 249 AGTLDGIIDTVSAVH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp TTCEEEEEECCSSCC------CSHHHHHHEEEEEEEEECC
T ss_pred hCCCCEEEECCCcHH------HHHHHHHHHhcCCEEEEEc
Confidence 136999987654321 2345677889999988753
No 379
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.39 E-value=0.18 Score=35.36 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=49.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|+=+|+ |.....+++.+.. .+.+|+++|.+++..+.+.+.... .+.....+...+...-
T Consensus 168 ~V~ViGa--G~iG~~~a~~l~~---------~Ga~V~~~d~~~~~~~~~~~~~g~---------~~~~~~~~~~~l~~~~ 227 (369)
T 2eez_A 168 SVVILGG--GTVGTNAAKIALG---------MGAQVTILDVNHKRLQYLDDVFGG---------RVITLTATEANIKKSV 227 (369)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHTTT---------SEEEEECCHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------CCCEEEEEECCHHHHHHHHHhcCc---------eEEEecCCHHHHHHHH
Confidence 4556666 5555555544321 256899999998776665543311 2211111111111001
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..+|+|+..-.......+.-...+..+.|+++|+++.+
T Consensus 228 ~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 228 QHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp HHCSEEEECCC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred hCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 24799987654432111111235567788999987754
No 380
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.37 E-value=2.8 Score=27.89 Aligned_cols=77 Identities=8% Similarity=0.030 Sum_probs=50.7
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-C---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-P--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.++.+++-.+.+.+.+..... .++.++..|+.+. .
T Consensus 15 vlITGa-s~GIG~~~a~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~~v~ 79 (311)
T 3o26_A 15 AVVTGG-NKGIGFEICKQLSS---------NGIMVVLTCRDVTKGHEAVEKLKNSNH-----ENVVFHQLDVTDPIATMS 79 (311)
T ss_dssp EEESSC-SSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHTTTC-----CSEEEEECCTTSCHHHHH
T ss_pred EEEecC-CchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEccCCCcHHHHH
Confidence 444444 45566666665531 267899999999887777666655432 1788999998764 2
Q ss_pred -----C--CCCCeeEEEEccccc
Q psy890 79 -----I--ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -----~--~~~~~D~i~~~~~l~ 94 (131)
. ..+.+|+++.+.+..
T Consensus 80 ~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 80 SLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHhCCCCCEEEECCccc
Confidence 0 014689999987754
No 381
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.13 E-value=2.7 Score=27.46 Aligned_cols=99 Identities=10% Similarity=0.111 Sum_probs=61.2
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C--
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I-- 79 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~-- 79 (131)
+|=.| |+|.+...+++.+-. .+.+|+.++.+++.++...+... . ++.++..|+.+.. .
T Consensus 11 ~lVTG-as~gIG~a~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~--~-------~~~~~~~Dv~~~~~v~~ 71 (255)
T 4eso_A 11 AIVIG-GTHGMGLATVRRLVE---------GGAEVLLTGRNESNIARIREEFG--P-------RVHALRSDIADLNEIAV 71 (255)
T ss_dssp EEEET-CSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHG--G-------GEEEEECCTTCHHHHHH
T ss_pred EEEEC-CCCHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHhC--C-------cceEEEccCCCHHHHHH
Confidence 34444 445566666665531 36789999999887776665542 1 6888888877642 0
Q ss_pred -------CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 80 -------ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 80 -------~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..+..|+++.+.+..... + .....+.+.+.|+++|.++.+.
T Consensus 72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 72 LGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 114689999876653221 1 1233455666777788887754
No 382
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.08 E-value=1.6 Score=30.16 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=52.2
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccc---c
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAE---E 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~ 76 (131)
+||-.|+ |.|.....+++.. +.++++++.+++.++.+++. +. ...+-..+.. .
T Consensus 165 ~vlV~Ga~ggiG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~~----g~------~~~~~~~~~~~~~~ 222 (354)
T 2j8z_A 165 YVLIHAGLSGVGTAAIQLTRMA------------GAIPLVTAGSQKKLQMAEKL----GA------AAGFNYKKEDFSEA 222 (354)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESCHHHHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHHc----CC------cEEEecCChHHHHH
Confidence 3566663 4455555555553 56899999998877776432 11 1111111100 0
Q ss_pred C-C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. . .....+|+++.+.+-. .+....+.|+++|+++++-
T Consensus 223 ~~~~~~~~~~d~vi~~~G~~-------~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 223 TLKFTKGAGVNLILDCIGGS-------YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp HHHHTTTSCEEEEEESSCGG-------GHHHHHHHEEEEEEEEECC
T ss_pred HHHHhcCCCceEEEECCCch-------HHHHHHHhccCCCEEEEEe
Confidence 0 0 1234699998765531 3567788999999988754
No 383
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.02 E-value=1.2 Score=30.44 Aligned_cols=90 Identities=11% Similarity=0.096 Sum_probs=52.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccc---c
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAE---E 76 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~ 76 (131)
++|-.|+ |.|.....+++.. +.++++++.+++.++.+++. +. ...+-..+.. .
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~------------G~~Vi~~~~~~~~~~~~~~~----g~------~~~~d~~~~~~~~~ 205 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHL------------GATVIGTVSTEEKAETARKL----GC------HHTINYSTQDFAEV 205 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHc----CC------CEEEECCCHHHHHH
Confidence 3566664 4555555555553 46899999998777766542 21 1111111100 0
Q ss_pred CC--CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 LP--IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~~--~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.. .....+|+++.+.+- ..+..+.+.|+++|+++.+-
T Consensus 206 i~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 206 VREITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HHHHHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 00 112469999876542 34677889999999987754
No 384
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.99 E-value=0.9 Score=31.25 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=54.8
Q ss_pred ceeeeecc--cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc---
Q psy890 2 YILFYLVF--PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE--- 76 (131)
Q Consensus 2 ~iLdig~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--- 76 (131)
++|-.|+| .|.....+++... +.+++++|.+++..+.+++. +. ...+-..+...
T Consensus 173 ~vlV~Gagg~iG~~~~~~a~~~~-----------Ga~Vi~~~~~~~~~~~~~~~----g~------~~~~~~~~~~~~~~ 231 (347)
T 1jvb_A 173 TLLVVGAGGGLGTMAVQIAKAVS-----------GATIIGVDVREEAVEAAKRA----GA------DYVINASMQDPLAE 231 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHT-----------CCEEEEEESSHHHHHHHHHH----TC------SEEEETTTSCHHHH
T ss_pred EEEEECCCccHHHHHHHHHHHcC-----------CCeEEEEcCCHHHHHHHHHh----CC------CEEecCCCccHHHH
Confidence 46777776 4455666666541 46899999999877776532 21 11111111110
Q ss_pred C-CCCC-CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 77 L-PIES-DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 ~-~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .... +.+|+++...+- ...+.+..+.|+++|+++.+-
T Consensus 232 ~~~~~~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 232 IRRITESKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HHHHTTTSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECC
T ss_pred HHHHhcCCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 0 0111 479999876542 235677889999999988753
No 385
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.66 E-value=0.21 Score=34.56 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=53.2
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-- 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 77 (131)
+||-.|+ |.|..+..+++.. +.++++++.+++-++.+++. +. .. .+..+-.+.
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga------~~-~~~~~~~~~~~ 226 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAF------------GAEVYATAGSTGKCEACERL----GA------KR-GINYRSEDFAA 226 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHH----TC------SE-EEETTTSCHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHhc----CC------CE-EEeCCchHHHH
Confidence 3555532 3456666666653 56899999999887777642 21 11 111111110
Q ss_pred ---CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 ---PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 ---~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
......+|+|+...+-. .+....+.|+++|+++.+-
T Consensus 227 ~~~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 227 VIKAETGQGVDIILDMIGAA-------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HHHHHHSSCEEEEEESCCGG-------GHHHHHHTEEEEEEEEECC
T ss_pred HHHHHhCCCceEEEECCCHH-------HHHHHHHHhccCCEEEEEE
Confidence 01135699998865521 4677788999999988754
No 386
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.43 E-value=0.92 Score=32.82 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=45.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
|+|+=+|| |.....+++.+.. .+-.++.+|.+++.++.+.+.+ .+..+.+|..+..
T Consensus 4 M~iiI~G~--G~vG~~la~~L~~---------~~~~v~vId~d~~~~~~~~~~~-----------~~~~i~Gd~~~~~~L 61 (461)
T 4g65_A 4 MKIIILGA--GQVGGTLAENLVG---------ENNDITIVDKDGDRLRELQDKY-----------DLRVVNGHASHPDVL 61 (461)
T ss_dssp EEEEEECC--SHHHHHHHHHTCS---------TTEEEEEEESCHHHHHHHHHHS-----------SCEEEESCTTCHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHHhc-----------CcEEEEEcCCCHHHH
Confidence 55665555 6788888888742 3567999999999888776554 4566777766542
Q ss_pred --CCCCCeeEEEE
Q psy890 79 --IESDSYSAYTI 89 (131)
Q Consensus 79 --~~~~~~D~i~~ 89 (131)
-.-+..|++++
T Consensus 62 ~~Agi~~ad~~ia 74 (461)
T 4g65_A 62 HEAGAQDADMLVA 74 (461)
T ss_dssp HHHTTTTCSEEEE
T ss_pred HhcCCCcCCEEEE
Confidence 11245777765
No 387
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.36 E-value=1.8 Score=29.98 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=50.8
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH---HHHHHHHHHhhhccCCCCCCCceeEEecc-ccc
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR---AMLDVGEQRARDLFKVPVPNPRLRFLEAN-AEE 76 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~ 76 (131)
+||-+|+| .|.....+++.. +.++++++.++ +-.+.+++. + ...+..+ +.+
T Consensus 183 ~VlV~GaG~vG~~~~q~a~~~------------Ga~Vi~~~~~~~~~~~~~~~~~~----g--------a~~v~~~~~~~ 238 (366)
T 2cdc_A 183 KVLVVGTGPIGVLFTLLFRTY------------GLEVWMANRREPTEVEQTVIEET----K--------TNYYNSSNGYD 238 (366)
T ss_dssp EEEEESCHHHHHHHHHHHHHH------------TCEEEEEESSCCCHHHHHHHHHH----T--------CEEEECTTCSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------------CCEEEEEeCCccchHHHHHHHHh----C--------CceechHHHHH
Confidence 45666762 355556666654 45899999887 666555432 2 1111111 000
Q ss_pred -CCCCCCCeeEEEEccccccccCHHHHH-HHHHHhccCCcEEEEEe
Q psy890 77 -LPIESDSYSAYTIAFGIRNVTRIDKAL-SEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 77 -~~~~~~~~D~i~~~~~l~~~~~~~~~l-~~~~~~L~p~G~l~~~~ 120 (131)
.......+|+|+...+.. ..+ ....+.|+++|+++++-
T Consensus 239 ~~~~~~~~~d~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 239 KLKDSVGKFDVIIDATGAD------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp HHHHHHCCEEEEEECCCCC------THHHHHHGGGEEEEEEEEECS
T ss_pred HHHHhCCCCCEEEECCCCh------HHHHHHHHHHHhcCCEEEEEe
Confidence 000014699998765421 134 77889999999988754
No 388
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.04 E-value=0.46 Score=32.92 Aligned_cols=92 Identities=14% Similarity=0.102 Sum_probs=51.1
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
+||-+|+| .|..+..+++.. +.++++++.+++-++.+++.+ +.. .+ +-..+.......
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~------------Ga~Vi~~~~~~~~~~~~~~~l---Ga~-----~v-i~~~~~~~~~~~ 241 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAM------------GHHVTVISSSNKKREEALQDL---GAD-----DY-VIGSDQAKMSEL 241 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCEEEEEESSTTHHHHHHTTS---CCS-----CE-EETTCHHHHHHS
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCeEEEEeCChHHHHHHHHHc---CCc-----ee-eccccHHHHHHh
Confidence 35556653 355566666664 458999999887666655332 211 11 111111111001
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+.+|+|+-.-+-. ..+....+.|+++|+++.+-
T Consensus 242 ~~g~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 242 ADSLDYVIDTVPVH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TTTEEEEEECCCSC------CCSHHHHTTEEEEEEEEECS
T ss_pred cCCCCEEEECCCCh------HHHHHHHHHhccCCEEEEeC
Confidence 13699998754421 12455678899999988753
No 389
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.72 E-value=0.25 Score=34.73 Aligned_cols=99 Identities=16% Similarity=0.091 Sum_probs=50.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|+=+|+ |.....+++.+.. .+.+|+++|.+++-++.+.+.... .+.....+...+...-
T Consensus 170 ~V~ViG~--G~iG~~~a~~a~~---------~Ga~V~~~d~~~~~l~~~~~~~g~---------~~~~~~~~~~~l~~~l 229 (377)
T 2vhw_A 170 DVVVIGA--GTAGYNAARIANG---------MGATVTVLDINIDKLRQLDAEFCG---------RIHTRYSSAYELEGAV 229 (377)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHTTT---------SSEEEECCHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHHHhcCC---------eeEeccCCHHHHHHHH
Confidence 4566666 5565555544321 246899999999877766543321 1111111111110001
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..+|+|+..-.......+.-+..+..+.|+|||+++-+-
T Consensus 230 ~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 247999874432211111111345667889999887543
No 390
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.66 E-value=0.19 Score=34.86 Aligned_cols=92 Identities=9% Similarity=0.041 Sum_probs=53.3
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC--C
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--P 78 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~ 78 (131)
+||-+|+| .|..+..+++.. +.++++++.+++-++.+++. +.. .+ +-..+..+. .
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga~-----~v-~~~~~~~~~~~~ 239 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAM------------GAETYVISRSSRKREDAMKM----GAD-----HY-IATLEEGDWGEK 239 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------------TCEEEEEESSSTTHHHHHHH----TCS-----EE-EEGGGTSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------------CCEEEEEcCCHHHHHHHHHc----CCC-----EE-EcCcCchHHHHH
Confidence 46777764 366677777764 45799999988777776542 211 11 111111011 0
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.. +.+|+|+....-.. ...+..+.+.|+++|+++.+-
T Consensus 240 ~~-~~~D~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 240 YF-DTFDLIVVCASSLT----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp SC-SCEEEEEECCSCST----TCCTTTGGGGEEEEEEEEECC
T ss_pred hh-cCCCEEEECCCCCc----HHHHHHHHHHhcCCCEEEEec
Confidence 11 47999987654300 112455678899999987653
No 391
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.49 E-value=2.1 Score=27.81 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=61.6
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
||=. .|+|.+...+++.+... .+.++++++.+.+..+...+.+...+ .++.++..|+.+..
T Consensus 7 vlIT-GasggIG~~~a~~L~~~--------~g~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 7 ALVT-GGNKGIGLAIVRDLCRL--------FSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp EEES-SCSSHHHHHHHHHHHHH--------SSSEEEEEESSHHHHHHHHHHHHHTT------CCCEEEECCTTCHHHHHH
T ss_pred EEEe-CCCcHHHHHHHHHHHHh--------cCCeEEEEeCChHHHHHHHHHHHhcC------CeeEEEECCCCCHHHHHH
Confidence 4433 45666777777765410 15689999998877766666555432 16788888877632
Q ss_pred -CC-----CCCeeEEEEccccccc--------cC-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -IE-----SDSYSAYTIAFGIRNV--------TR-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l~~~--------~~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+. .+.+|+++.+.+.... .+ ....++.+.+.++++|+++++.
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 10 1368999987654321 11 1234455566666678877653
No 392
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.38 E-value=2.4 Score=24.49 Aligned_cols=92 Identities=10% Similarity=0.222 Sum_probs=50.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
|+|+=+|+ |..+..+++.+.. .+.+++++|.+++.++...+.. .+.++..|..+..
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~---------~g~~v~~~d~~~~~~~~~~~~~-----------~~~~~~~d~~~~~~l 62 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSE---------KGHDIVLIDIDKDICKKASAEI-----------DALVINGDCTKIKTL 62 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHC-----------SSEEEESCTTSHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHHhc-----------CcEEEEcCCCCHHHH
Confidence 45666655 7777777776541 2568999999987665544321 2334444433211
Q ss_pred --CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 79 --IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
.....+|+|+....-. .....+..+.+.+.++ .+++
T Consensus 63 ~~~~~~~~d~vi~~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 63 EDAGIEDADMYIAVTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp HHTTTTTCSEEEECCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred HHcCcccCCEEEEeeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 1124689988763221 2223445556667775 4443
No 393
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.01 E-value=4.1 Score=26.74 Aligned_cols=70 Identities=13% Similarity=-0.046 Sum_probs=49.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
|+||=.| + |.+...+++.+.+ .+.+|++++.++.-...... . .++++..|+.++.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~---------~g~~V~~~~r~~~~~~~~~~-----~-------~~~~~~~D~~d~~-- 60 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAP---------QGWRIIGTSRNPDQMEAIRA-----S-------GAEPLLWPGEEPS-- 60 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGG---------GTCEEEEEESCGGGHHHHHH-----T-------TEEEEESSSSCCC--
T ss_pred CcEEEEC-C-cHHHHHHHHHHHH---------CCCEEEEEEcChhhhhhHhh-----C-------CCeEEEecccccc--
Confidence 4688888 4 8998888888752 25689999988754433221 1 6888889988765
Q ss_pred CCCeeEEEEcccccc
Q psy890 81 SDSYSAYTIAFGIRN 95 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~ 95 (131)
...+|.|+.......
T Consensus 61 ~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 61 LDGVTHLLISTAPDS 75 (286)
T ss_dssp CTTCCEEEECCCCBT
T ss_pred cCCCCEEEECCCccc
Confidence 467899988665543
No 394
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.65 E-value=3.4 Score=25.39 Aligned_cols=92 Identities=10% Similarity=0.051 Sum_probs=50.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCC-CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHC-APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL--- 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 77 (131)
+|+-+| .|..+..+++.+.. . +.+|+++|.+++.++.+++ . .+..+.+|..+.
T Consensus 41 ~v~IiG--~G~~G~~~a~~L~~---------~~g~~V~vid~~~~~~~~~~~----~--------g~~~~~gd~~~~~~l 97 (183)
T 3c85_A 41 QVLILG--MGRIGTGAYDELRA---------RYGKISLGIEIREEAAQQHRS----E--------GRNVISGDATDPDFW 97 (183)
T ss_dssp SEEEEC--CSHHHHHHHHHHHH---------HHCSCEEEEESCHHHHHHHHH----T--------TCCEEECCTTCHHHH
T ss_pred cEEEEC--CCHHHHHHHHHHHh---------ccCCeEEEEECCHHHHHHHHH----C--------CCCEEEcCCCCHHHH
Confidence 455555 46777777766541 2 4579999999977666542 1 233444454321
Q ss_pred -CC-CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 78 -PI-ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 -~~-~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.. .-..+|+|+....- ......+....+.+.|++.++..
T Consensus 98 ~~~~~~~~ad~vi~~~~~---~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 98 ERILDTGHVKLVLLAMPH---HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HTBCSCCCCCEEEECCSS---HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HhccCCCCCCEEEEeCCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 11 23468988874321 11122233445566677777654
No 395
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=87.56 E-value=4.3 Score=26.52 Aligned_cols=81 Identities=12% Similarity=0.080 Sum_probs=48.0
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.. .+.+|++++.+++..+...+.+...... .++.++..|+.+..
T Consensus 10 vlVTG-as~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~D~~~~~~v~~ 75 (267)
T 2gdz_A 10 ALVTG-AAQGIGRAFAEALLL---------KGAKVALVDWNLEAGVQCKAALHEQFEP----QKTLFIQCDVADQQQLRD 75 (267)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHTTTSCG----GGEEEEECCTTSHHHHHH
T ss_pred EEEEC-CCCcHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhhcCC----CceEEEecCCCCHHHHHH
Confidence 34444 556666666666531 2678999999887666555444331101 16788888876532
Q ss_pred -CC-----CCCeeEEEEcccccccc
Q psy890 79 -IE-----SDSYSAYTIAFGIRNVT 97 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l~~~~ 97 (131)
+. .+.+|+++.+.+.....
T Consensus 76 ~~~~~~~~~g~id~lv~~Ag~~~~~ 100 (267)
T 2gdz_A 76 TFRKVVDHFGRLDILVNNAGVNNEK 100 (267)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCSS
T ss_pred HHHHHHHHcCCCCEEEECCCCCChh
Confidence 10 13589999887754333
No 396
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.52 E-value=5 Score=27.21 Aligned_cols=78 Identities=10% Similarity=0.039 Sum_probs=51.1
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+.. .+.+|++++.+++..+...+.+...+... ++.++..|+.+..
T Consensus 11 vlVTGa-s~gIG~~la~~l~~---------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~----~~~~~~~Dl~~~~~v~~ 76 (319)
T 3ioy_A 11 AFVTGG-ANGVGIGLVRQLLN---------QGCKVAIADIRQDSIDKALATLEAEGSGP----EVMGVQLDVASREGFKM 76 (319)
T ss_dssp EEEETT-TSTHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHHTCGG----GEEEEECCTTCHHHHHH
T ss_pred EEEcCC-chHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhcCCCC----eEEEEECCCCCHHHHHH
Confidence 444444 45566666666531 36789999999988887777665543221 6888888877642
Q ss_pred -C-----CCCCeeEEEEccccc
Q psy890 79 -I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l~ 94 (131)
+ ..+.+|+++.+.+..
T Consensus 77 ~~~~~~~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 77 AADEVEARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHHHHHHHTCCEEEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcC
Confidence 1 124689999987653
No 397
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.52 E-value=4.4 Score=26.54 Aligned_cols=75 Identities=7% Similarity=-0.057 Sum_probs=49.1
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.++.+++.++...+.+...+ .++.++..|+.+..
T Consensus 14 vlVTGa-s~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~ 77 (264)
T 3ucx_A 14 VVISGV-GPALGTTLARRCAE---------QGADLVLAARTVERLEDVAKQVTDTG------RRALSVGTDITDDAQVAH 77 (264)
T ss_dssp EEEESC-CTTHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHH
T ss_pred EEEECC-CcHHHHHHHHHHHH---------CcCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHH
Confidence 444444 44455666555431 36789999999988887777665543 27888888877642
Q ss_pred -C-----CCCCeeEEEEcccc
Q psy890 79 -I-----ESDSYSAYTIAFGI 93 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l 93 (131)
+ ..+..|+++.+.+.
T Consensus 78 ~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 78 LVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHcCCCcEEEECCCC
Confidence 1 12468999987644
No 398
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=87.36 E-value=1.2 Score=35.88 Aligned_cols=90 Identities=19% Similarity=0.138 Sum_probs=60.7
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-CC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-IE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 80 (131)
.+||+|.|.-. .++..++ ....++.+|.-+. ......+.. ...|+..|..... ..
T Consensus 824 ~~lDlGTGPE~---RiLsLiP----------~~~pvtm~D~RP~-------ae~~~~w~~----~T~f~~~DyL~~~~~~ 879 (1289)
T 1ej6_A 824 VVLDLGTGPEA---KILELIP----------ATSPVTCVDIRPT-------AQPSGCWNV----RTTFLELDYLSDGWIT 879 (1289)
T ss_dssp CEEEESCCSSC---GGGGTSC----------TTSCEEEEESSCC-------CSCSTTBSS----CEEEEESCTTSSSCGG
T ss_pred eEEEccCCCcc---eeeeecC----------CCCceEEecccCc-------hhhhccccc----cceeeEccccccceee
Confidence 57899888843 2233333 4678999998551 112334443 6899999977654 23
Q ss_pred CCCeeEEEEccccccc-----cCHHHHHHHHHHhccCCcE
Q psy890 81 SDSYSAYTIAFGIRNV-----TRIDKALSEAYRVLKPGGR 115 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~-----~~~~~~l~~~~~~L~p~G~ 115 (131)
...+|.+.|.+.|..- ..+...++++.+..++.|.
T Consensus 880 ~~~~D~vt~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~ 919 (1289)
T 1ej6_A 880 GVRGDIVTCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTA 919 (1289)
T ss_dssp GCCCSEEEECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCC
T ss_pred cCCCcEEEEEeechhhhhccCCcHHHHHHHHHHHHHhcCc
Confidence 4568999998877432 2678889999988877764
No 399
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.23 E-value=3.8 Score=27.48 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=60.1
Q ss_pred eeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----
Q psy890 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP----- 78 (131)
Q Consensus 4 Ldig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 78 (131)
|=-|+++ -+...+++.+-+ .+.+|..+|.+++.++...+.+.. +...+..|+.+..
T Consensus 33 lVTGas~-GIG~aiA~~la~---------~Ga~V~i~~r~~~~l~~~~~~~g~---------~~~~~~~Dv~~~~~v~~~ 93 (273)
T 4fgs_A 33 VITGATS-GIGLAAAKRFVA---------EGARVFITGRRKDVLDAAIAEIGG---------GAVGIQADSANLAELDRL 93 (273)
T ss_dssp EEESCSS-HHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHCT---------TCEEEECCTTCHHHHHHH
T ss_pred EEeCcCC-HHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHcCC---------CeEEEEecCCCHHHHHHH
Confidence 3334444 355555555431 378999999999888776655421 6677788876542
Q ss_pred C-----CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 I-----ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ~-----~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ .-+..|+++.+.+..... + .-...+.+.++|+.+|.++.+.
T Consensus 94 ~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 94 YEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 0 125789999877653221 1 1233455667788888876653
No 400
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.18 E-value=1.2 Score=30.22 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=52.3
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc-cc-C
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA-EE-L 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~-~ 77 (131)
+||-.|+ |.|..+..+++.. +.++++++.+++-++.+++ + +.. .+ +-..+. .+ .
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~------------Ga~vi~~~~~~~~~~~~~~-l---Ga~-----~~-i~~~~~~~~~~ 209 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR------------GYTVEASTGKAAEHDYLRV-L---GAK-----EV-LAREDVMAERI 209 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT------------TCCEEEEESCTTCHHHHHH-T---TCS-----EE-EECC-------
T ss_pred eEEEecCCCHHHHHHHHHHHHC------------CCEEEEEECCHHHHHHHHH-c---CCc-----EE-EecCCcHHHHH
Confidence 4566675 4566677777664 4679999988776666653 1 211 11 111111 01 1
Q ss_pred -CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
......+|+|+-.-+- ..+.+..+.++++|+++++-
T Consensus 210 ~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 210 RPLDKQRWAAAVDPVGG-------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp --CCSCCEEEEEECSTT-------TTHHHHHHTEEEEEEEEECS
T ss_pred HHhcCCcccEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 1223469999875442 13677788999999988753
No 401
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.15 E-value=0.6 Score=30.94 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=30.9
Q ss_pred eEEecccccC--CCCCCCeeEEEEccccccc--------------cCHHHHHHHHHHhccCCcEEEEE
Q psy890 68 RFLEANAEEL--PIESDSYSAYTIAFGIRNV--------------TRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 68 ~~~~~d~~~~--~~~~~~~D~i~~~~~l~~~--------------~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
+++.+|..+. .++.++||+|++.-....- .-....+.++.++|+|+|.+++.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4555554321 1344578888773221100 12356778889999999998764
No 402
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.39 E-value=5.7 Score=26.65 Aligned_cols=76 Identities=9% Similarity=0.038 Sum_probs=50.6
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+.. .+.+|+.++.+++.++...+.+...+ .++.++..|+.+..
T Consensus 34 vlVTGa-s~gIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 34 AVVTGG-ASGIGLATATEFAR---------RGARLVLSDVDQPALEQAVNGLRGQG------FDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp EEEETT-TSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHH
T ss_pred EEEeCC-CCHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEccCCCHHHHHH
Confidence 444444 45566666665531 36789999999988888777766543 27888888977642
Q ss_pred -CC-----CCCeeEEEEccccc
Q psy890 79 -IE-----SDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l~ 94 (131)
+. .+..|+++.+.+..
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcC
Confidence 11 13689999877653
No 403
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.31 E-value=6.3 Score=31.55 Aligned_cols=43 Identities=7% Similarity=-0.090 Sum_probs=33.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCC-CeEEEEeCCHHHHHHHHHHhh
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQRAR 55 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~~~~~~~ 55 (131)
++++|+-||.|.++.-+.+. +. ..+.++|+++.+....+.+++
T Consensus 541 l~~iDLFaG~GGlslGl~~A------------G~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA------------GISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH------------TSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CeEEEeccCccHHHHHHHHC------------CCCceEEEEECCHHHHHHHHHhCC
Confidence 46899999999998877664 12 358899999998887777654
No 404
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.27 E-value=1 Score=30.62 Aligned_cols=90 Identities=19% Similarity=0.153 Sum_probs=53.4
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc--ccC
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA--EEL 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~ 77 (131)
+||-.|+ |.|.....+++.. +.++++++.+++-++.+++. +.. .+ +-..+. ...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~------------Ga~vi~~~~~~~~~~~~~~l----Ga~-----~v-~~~~~~~~~~~ 210 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR------------GYDVVASTGNREAADYLKQL----GAS-----EV-ISREDVYDGTL 210 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH------------TCCEEEEESSSSTHHHHHHH----TCS-----EE-EEHHHHCSSCC
T ss_pred eEEEECCCCHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHc----CCc-----EE-EECCCchHHHH
Confidence 4566665 4556666666664 45799999887766666532 211 11 111111 111
Q ss_pred -CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
......+|+|+...+ . ..+.+..+.++++|+++++-
T Consensus 211 ~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 211 KALSKQQWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CSSCCCCEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECC
T ss_pred HHhhcCCccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEe
Confidence 122346999987543 2 25778889999999988753
No 405
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.98 E-value=0.39 Score=33.47 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=41.8
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
|+|+=+|| |..+..+++.+. ....++..|.+.+.++.+++ ....+..|+.+.. +
T Consensus 17 mkilvlGa--G~vG~~~~~~L~----------~~~~v~~~~~~~~~~~~~~~-------------~~~~~~~d~~d~~~l 71 (365)
T 3abi_A 17 MKVLILGA--GNIGRAIAWDLK----------DEFDVYIGDVNNENLEKVKE-------------FATPLKVDASNFDKL 71 (365)
T ss_dssp CEEEEECC--SHHHHHHHHHHT----------TTSEEEEEESCHHHHHHHTT-------------TSEEEECCTTCHHHH
T ss_pred cEEEEECC--CHHHHHHHHHHh----------cCCCeEEEEcCHHHHHHHhc-------------cCCcEEEecCCHHHH
Confidence 78899988 667777777764 24678999999877665532 3334455554321 1
Q ss_pred --CCCCeeEEEEcc
Q psy890 80 --ESDSYSAYTIAF 91 (131)
Q Consensus 80 --~~~~~D~i~~~~ 91 (131)
.-...|+|++..
T Consensus 72 ~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 72 VEVMKEFELVIGAL 85 (365)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHHhCCCEEEEec
Confidence 113578888753
No 406
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.69 E-value=0.87 Score=31.22 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=52.2
Q ss_pred ceeeeecccc-hhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-C-C
Q psy890 2 YILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-L-P 78 (131)
Q Consensus 2 ~iLdig~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~ 78 (131)
++|=+|+|++ ..+..+++... +.+++++|.+++-++.+++.-... -+.....|..+ . .
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~-----------g~~Vi~~~~~~~r~~~~~~~Ga~~--------~i~~~~~~~~~~v~~ 226 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVF-----------GAKVIAVDINQDKLNLAKKIGADV--------TINSGDVNPVDEIKK 226 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTS-----------CCEEEEEESCHHHHHHHHHTTCSE--------EEEC-CCCHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHhC-----------CCEEEEEECcHHHhhhhhhcCCeE--------EEeCCCCCHHHHhhh
Confidence 4566777653 34455555543 689999999997666655332110 11111112111 1 0
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.....+|.++...+ ....+....+.++++|.++++-
T Consensus 227 ~t~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 227 ITGGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HTTSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred hcCCCCceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 12335677665322 2345788889999999987753
No 407
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.33 E-value=3 Score=27.19 Aligned_cols=75 Identities=9% Similarity=-0.065 Sum_probs=46.4
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-CHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.| |+|.+...+++.+.+ .+.++++++. +++..+...+.+...+ .++.++..|+.+..
T Consensus 24 vlItG-asggiG~~la~~l~~---------~G~~v~~~~r~~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 24 ALTTG-AGRGIGRGIAIELGR---------RGASVVVNYGSSSKAAEEVVAELKKLG------AQGVAIQADISKPSEVV 87 (274)
T ss_dssp EEETT-TTSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHH
T ss_pred EEEeC-CCchHHHHHHHHHHH---------CCCEEEEEcCCchHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHH
Confidence 44344 566677777666532 2568999888 7766665555554432 26788888877532
Q ss_pred --CC-----CCCeeEEEEcccc
Q psy890 79 --IE-----SDSYSAYTIAFGI 93 (131)
Q Consensus 79 --~~-----~~~~D~i~~~~~l 93 (131)
+. -+.+|+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 11 1368999887654
No 408
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.18 E-value=6 Score=25.88 Aligned_cols=55 Identities=4% Similarity=-0.008 Sum_probs=39.1
Q ss_pred CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----C-----CCCCeeEEEEcccc
Q psy890 34 APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----I-----ESDSYSAYTIAFGI 93 (131)
Q Consensus 34 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~~~~D~i~~~~~l 93 (131)
+.+|..++.+++..+.+.+.++..+-. ++.++..|+.+.. + .-+..|+++.+.+.
T Consensus 32 Ga~Vvi~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 32 GAKLVFTYRKERSRKELEKLLEQLNQP-----EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp TCEEEEEESSGGGHHHHHHHHGGGTCS-----SCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCC-----cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 789999999988888877777654322 6788888876532 0 12578999887654
No 409
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.93 E-value=0.97 Score=28.04 Aligned_cols=94 Identities=16% Similarity=0.100 Sum_probs=56.4
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccC-CC-
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL-PI- 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~- 79 (131)
-|||+|-|.|+.--.+.+.++ ..+++++|-.-. ......++ .-.++.+|+.+. +.
T Consensus 43 pVlElGLGNGRTydHLRe~~P-----------~R~I~vfDR~~~--------~hp~~~P~----~e~~ilGdi~~tL~~~ 99 (174)
T 3iht_A 43 PVYELGLGNGRTYHHLRQHVQ-----------GREIYVFERAVA--------SHPDSTPP----EAQLILGDIRETLPAT 99 (174)
T ss_dssp CEEEECCTTCHHHHHHHHHCC-----------SSCEEEEESSCC--------CCGGGCCC----GGGEEESCHHHHHHHH
T ss_pred ceEEecCCCChhHHHHHHhCC-----------CCcEEEEEeeec--------cCCCCCCc----hHheecccHHHHHHHH
Confidence 389999999998888888775 788999995221 00111111 446677776653 11
Q ss_pred -C--CCCeeEEEEccccccccCHH----HHHHHHHHhccCCcEEEE
Q psy890 80 -E--SDSYSAYTIAFGIRNVTRID----KALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 80 -~--~~~~D~i~~~~~l~~~~~~~----~~l~~~~~~L~p~G~l~~ 118 (131)
. ..+.-++..-.+.++-.+-. ..-..+..+|.|||+++-
T Consensus 100 ~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 100 LERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 1 34556666655544433211 122345577899999864
No 410
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.79 E-value=7.3 Score=26.52 Aligned_cols=89 Identities=12% Similarity=0.045 Sum_probs=50.9
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCC--eEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAP--HVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+|.-|| .|.....++..+.. .+. +|+++|.+++.++.+.+ .+. +.-...+..+.
T Consensus 35 kI~IIG--~G~mG~slA~~l~~---------~G~~~~V~~~dr~~~~~~~a~~----~G~-------~~~~~~~~~~~-- 90 (314)
T 3ggo_A 35 NVLIVG--VGFMGGSFAKSLRR---------SGFKGKIYGYDINPESISKAVD----LGI-------IDEGTTSIAKV-- 90 (314)
T ss_dssp EEEEES--CSHHHHHHHHHHHH---------TTCCSEEEEECSCHHHHHHHHH----TTS-------CSEEESCTTGG--
T ss_pred EEEEEe--eCHHHHHHHHHHHh---------CCCCCEEEEEECCHHHHHHHHH----CCC-------cchhcCCHHHH--
Confidence 455565 45566666555431 133 89999999987766543 221 11111232220
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
.-...|+|+..-... .....+.++...++++.+++
T Consensus 91 ~~~~aDvVilavp~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 91 EDFSPDFVMLSSPVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GGGCCSEEEECSCGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred hhccCCEEEEeCCHH---HHHHHHHHHhhccCCCcEEE
Confidence 113469998764433 34567788888898887654
No 411
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=84.78 E-value=0.86 Score=30.66 Aligned_cols=88 Identities=16% Similarity=0.064 Sum_probs=51.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
+||-.|+ |.|.....+++.. +.++++++.+++-.+.+++ + +.. .+ +-..+..+...
T Consensus 128 ~vlV~Ga~G~vG~~~~~~a~~~------------Ga~Vi~~~~~~~~~~~~~~-~---ga~-----~~-~~~~~~~~~~~ 185 (302)
T 1iz0_A 128 KVLVQAAAGALGTAAVQVARAM------------GLRVLAAASRPEKLALPLA-L---GAE-----EA-ATYAEVPERAK 185 (302)
T ss_dssp EEEESSTTBHHHHHHHHHHHHT------------TCEEEEEESSGGGSHHHHH-T---TCS-----EE-EEGGGHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHh-c---CCC-----EE-EECCcchhHHH
Confidence 4666776 4566666666664 4689999998877766643 1 211 11 11111011100
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.-..+|+|+. .+- ..+....+.|+++|+++.+
T Consensus 186 ~~~~~d~vid-~g~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 186 AWGGLDLVLE-VRG-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp HTTSEEEEEE-CSC-------TTHHHHHTTEEEEEEEEEC
T ss_pred HhcCceEEEE-CCH-------HHHHHHHHhhccCCEEEEE
Confidence 0056999987 442 2467788999999998765
No 412
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=84.66 E-value=7.4 Score=26.47 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=52.7
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec--ccccC-
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA--NAEEL- 77 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~- 77 (131)
+||=.|+| .|..+..+++..+ ...++++|.+++-++.+++. +. ...+-.. +..+.
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G-----------~~~vi~~~~~~~k~~~a~~l----Ga------~~~i~~~~~~~~~~~ 221 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALG-----------AKSVTAIDISSEKLALAKSF----GA------MQTFNSSEMSAPQMQ 221 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHT----TC------SEEEETTTSCHHHHH
T ss_pred EEEEECCCCcchHHHHHHHHcC-----------CcEEEEEechHHHHHHHHHc----CC------eEEEeCCCCCHHHHH
Confidence 35556664 3455666666653 45688999999877766542 21 1111111 11110
Q ss_pred -C-CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 78 -P-IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 78 -~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
. .....+|+|+...+ ....+....+.++++|.+.+.-
T Consensus 222 ~~~~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 222 SVLRELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp HHHGGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECC
T ss_pred HhhcccCCccccccccc------ccchhhhhhheecCCeEEEEEe
Confidence 0 12245788876432 2345778889999999998754
No 413
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=84.40 E-value=1.4 Score=35.58 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=61.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCc-eeEEecccccCC-C
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPR-LRFLEANAEELP-I 79 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~-~ 79 (131)
.+||+|.|.-. .++..++ +...++.+|.-+. ......|.. . ..|+..|..... .
T Consensus 830 ~~lDLGTGPEc---RiLsliP----------~~~pvtmvD~RP~-------ae~~~~w~~----~~T~yi~~DYl~~~~~ 885 (1299)
T 3iyl_W 830 HLLDLGTGPEC---RILSLIP----------PTLQVTMSDSRPC-------AELMASFDP----ALTAYVQGDYSTAAFW 885 (1299)
T ss_dssp SEEEETCCSSC---SGGGSSC----------TTSCEEEEESSCC-------SSCGGGBCT----TTEEEEESCSSSGGGG
T ss_pred EEEEcCCCccc---eeeecCC----------CCCceEEEecCCc-------ccccccccc----ccceeEEeccccceeE
Confidence 57888888742 1233333 4678999997551 123344554 5 889999977654 3
Q ss_pred CCCCeeEEEEccccccc-----cCHHHHHHHHHHhccCCcE
Q psy890 80 ESDSYSAYTIAFGIRNV-----TRIDKALSEAYRVLKPGGR 115 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~-----~~~~~~l~~~~~~L~p~G~ 115 (131)
....+|.+.|.+.|..- -++...++++.+..+++|.
T Consensus 886 ~~~~~d~vtailSLGAA~a~a~~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 886 NGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp SSCCCSEEEETTTHHHHHHHTTCCHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCEEEEeeechhhhhhCCCcHHHHHHHHHHHHHhcCc
Confidence 44678999998877432 2678889999999888775
No 414
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.36 E-value=1.6 Score=29.97 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=52.0
Q ss_pred eeeee-c-ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-C-C
Q psy890 3 ILFYL-V-FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-L-P 78 (131)
Q Consensus 3 iLdig-~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~ 78 (131)
||-.| + +.|..+..+++.. +.++++++.+++-++.+++. +.. .+.-...+..+ . .
T Consensus 154 VlV~gg~G~vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~l----Ga~-----~vi~~~~~~~~~~~~ 212 (346)
T 3fbg_A 154 LLIINGAGGVGSIATQIAKAY------------GLRVITTASRNETIEWTKKM----GAD-----IVLNHKESLLNQFKT 212 (346)
T ss_dssp EEEESTTSHHHHHHHHHHHHT------------TCEEEEECCSHHHHHHHHHH----TCS-----EEECTTSCHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHhc----CCc-----EEEECCccHHHHHHH
Confidence 44453 2 3455566666653 56999999988877777652 211 11000001100 0 0
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.....+|+|+.... ....+..+.+.|+++|+++.+
T Consensus 213 ~~~~g~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 213 QGIELVDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp HTCCCEEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred hCCCCccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 12356999987533 234567888999999998654
No 415
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.27 E-value=6.6 Score=25.58 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=39.6
Q ss_pred CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----C-----CCCCeeEEEEccccc
Q psy890 34 APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 34 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~~~~D~i~~~~~l~ 94 (131)
+.+|+.++.+++..+...+.+..... .++.++..|+.+.. + ..+.+|+++.+.+..
T Consensus 47 G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 47 GADVVISDYHERRLGETRDQLADLGL-----GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHTTCS-----SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhcCC-----CceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 67899999999888877776654331 27889999987642 1 013689999877653
No 416
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=84.19 E-value=5.7 Score=27.18 Aligned_cols=43 Identities=14% Similarity=0.277 Sum_probs=29.5
Q ss_pred CCeeEEEEcccc----cc-c--cC----HHHHHHHHHHhccCCcEEEEEeccCC
Q psy890 82 DSYSAYTIAFGI----RN-V--TR----IDKALSEAYRVLKPGGRFLCLEFSHV 124 (131)
Q Consensus 82 ~~~D~i~~~~~l----~~-~--~~----~~~~l~~~~~~L~p~G~l~~~~~~~~ 124 (131)
+.||+|++...- |+ . .| ..-++.....+|+|||.+++--+...
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 669999996542 22 1 11 22356677889999999998776655
No 417
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=84.15 E-value=6.9 Score=25.73 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=58.3
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEe-CCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVAD-INRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+++..+ .+++..+...+.+...+ .++.++..|+.+..
T Consensus 30 ~lVTGa-s~GIG~aia~~la~---------~G~~Vv~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~ 93 (267)
T 3u5t_A 30 AIVTGA-SRGIGAAIAARLAS---------DGFTVVINYAGKAAAAEEVAGKIEAAG------GKALTAQADVSDPAAVR 93 (267)
T ss_dssp EEEESC-SSHHHHHHHHHHHH---------HTCEEEEEESSCSHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHH
T ss_pred EEEeCC-CCHHHHHHHHHHHH---------CCCEEEEEcCCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHH
Confidence 343444 44555555555421 256777764 45555555555554433 26888888877642
Q ss_pred --C-----CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 --I-----ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 --~-----~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ..+..|+++.+.+..... + ....++.+.+.|+++|.++.+.
T Consensus 94 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 94 RLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 1 014789999877653221 1 1233556667777788887764
No 418
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=83.74 E-value=6.4 Score=25.04 Aligned_cols=71 Identities=6% Similarity=-0.053 Sum_probs=45.0
Q ss_pred eecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-------
Q psy890 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP------- 78 (131)
Q Consensus 6 ig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 78 (131)
|-.|+|.+...+++.+.. .+.+|+.++.+++.++...+.+. .++.++..|+.+..
T Consensus 6 VTGas~gIG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~ 67 (230)
T 3guy_A 6 ITGASSGLGAELAKLYDA---------EGKATYLTGRSESKLSTVTNCLS---------NNVGYRARDLASHQEVEQLFE 67 (230)
T ss_dssp EESTTSHHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHTCS---------SCCCEEECCTTCHHHHHHHHH
T ss_pred EecCCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHh---------hccCeEeecCCCHHHHHHHHH
Confidence 444455666666666531 35789999999887776655441 16778888876542
Q ss_pred CCCCCeeEEEEccccc
Q psy890 79 IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~ 94 (131)
.-.+.+|+++.+.+..
T Consensus 68 ~~~~~~d~lv~~Ag~~ 83 (230)
T 3guy_A 68 QLDSIPSTVVHSAGSG 83 (230)
T ss_dssp SCSSCCSEEEECCCCC
T ss_pred HHhhcCCEEEEeCCcC
Confidence 1123459998876643
No 419
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.59 E-value=6.4 Score=25.61 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=46.0
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.. .+.+|+.+|.+.+..+...+.+. .++.++..|+.+..
T Consensus 11 vlVTG-as~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~ 71 (259)
T 4e6p_A 11 ALITG-SARGIGRAFAEAYVR---------EGATVAIADIDIERARQAAAEIG---------PAAYAVQMDVTRQDSIDA 71 (259)
T ss_dssp EEEET-CSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHH
T ss_pred EEEEC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHhC---------CCceEEEeeCCCHHHHHH
Confidence 44444 455566666665531 36789999999877766655442 16788888876532
Q ss_pred -C-----CCCCeeEEEEcccc
Q psy890 79 -I-----ESDSYSAYTIAFGI 93 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l 93 (131)
+ ..+..|+++.+.+.
T Consensus 72 ~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 72 AIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHHHHSSSCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 1 12368999987765
No 420
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.36 E-value=9.5 Score=26.69 Aligned_cols=97 Identities=9% Similarity=0.031 Sum_probs=59.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
.||.++.+.|.++-.++.. .++.+.-|--.....+.+...+++.+ ..+++...- .. ..
T Consensus 41 ~~~~~~d~~gal~~~~~~~---------------~~~~~~ds~~~~~~~~~n~~~~~~~~---~~~~~~~~~-~~---~~ 98 (375)
T 4dcm_A 41 PVLILNDAFGALSCALAEH---------------KPYSIGDSYISELATRENLRLNGIDE---SSVKFLDST-AD---YP 98 (375)
T ss_dssp CEEEECCSSSHHHHHTGGG---------------CCEEEESCHHHHHHHHHHHHHTTCCG---GGSEEEETT-SC---CC
T ss_pred CEEEECCCCCHHHHhhccC---------------CceEEEhHHHHHHHHHHHHHHcCCCc---cceEecccc-cc---cc
Confidence 4788888899887766543 12344436655556666777666543 135543221 11 23
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEec
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
..||+|+.... .........|.++...|+|++.+++..-
T Consensus 99 ~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 99 QQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp SSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred cCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 56899877432 2233456678888899999999987643
No 421
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.35 E-value=5.2 Score=26.14 Aligned_cols=102 Identities=11% Similarity=-0.004 Sum_probs=58.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEE-eCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVA-DINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+++.+ +.+++..+...+.+...+ .++.++..|+.+..
T Consensus 11 vlVTGa-s~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~ 74 (259)
T 3edm_A 11 IVVAGA-GRDIGRACAIRFAQ---------EGANVVLTYNGAAEGAATAVAEIEKLG------RSALAIKADLTNAAEVE 74 (259)
T ss_dssp EEEETT-TSHHHHHHHHHHHH---------TTCEEEEEECSSCHHHHHHHHHHHTTT------SCCEEEECCTTCHHHHH
T ss_pred EEEECC-CchHHHHHHHHHHH---------CCCEEEEEcCCCHHHHHHHHHHHHhcC------CceEEEEcCCCCHHHHH
Confidence 344444 44566666665531 25678877 666666666655555433 26788888877642
Q ss_pred --CC-----CCCeeEEEEccccc-cc---c-----C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 --IE-----SDSYSAYTIAFGIR-NV---T-----R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 --~~-----~~~~D~i~~~~~l~-~~---~-----~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+. -+..|+++.+.+.. .. . + .....+.+.+.|+++|.++.+.
T Consensus 75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 75 AAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 10 14689999876543 11 1 0 1233455666677778877654
No 422
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.32 E-value=7.9 Score=25.75 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=52.6
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHh-hhccCCCCCCCceeEEec---cccc
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRA-RDLFKVPVPNPRLRFLEA---NAEE 76 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---d~~~ 76 (131)
|+|.-+|+ |.....++..+.. .+.+|+++|.+++.++..++.- ...... ....... +..+
T Consensus 4 m~i~iiG~--G~~G~~~a~~l~~---------~g~~V~~~~r~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGA--GAMGSRLGIMLHQ---------GGNDVTLIDQWPAHIEAIRKNGLIADFNG-----EEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHHHHCEEEEETT-----EEEEECCCEECGGG
T ss_pred CeEEEECc--CHHHHHHHHHHHh---------CCCcEEEEECCHHHHHHHHhCCEEEEeCC-----CeeEecceeecchh
Confidence 56777776 4565555554431 1458999999987776665431 000000 0000001 1111
Q ss_pred CCCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 77 LPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 77 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
....-..+|+|+..-.-. .....+.++...++++..++..
T Consensus 68 ~~~~~~~~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 68 IDHQNEQVDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCTTSCCCSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred hcccCCCCCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 100012589998854322 3466777888888888766543
No 423
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.12 E-value=7.8 Score=25.55 Aligned_cols=74 Identities=11% Similarity=-0.054 Sum_probs=47.7
Q ss_pred cccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----C---
Q psy890 8 VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----I--- 79 (131)
Q Consensus 8 ~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~--- 79 (131)
.|+|.+...+++.+-. .+.+|+.+|.+++..+...+.+...+... .++.++..|+.+.. +
T Consensus 18 Gas~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 18 GGGSGIGKGVAAGLVA---------AGASVMIVGRNPDKLAGAVQELEALGANG---GAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHTTCCSS---CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHHhCCCC---ceEEEEeCCCCCHHHHHHHHHHH
Confidence 3455566666665531 36789999999988877777665543211 16788888877642 1
Q ss_pred --CCCCeeEEEEcccc
Q psy890 80 --ESDSYSAYTIAFGI 93 (131)
Q Consensus 80 --~~~~~D~i~~~~~l 93 (131)
..+..|+++.+.+.
T Consensus 86 ~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 01368999987765
No 424
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=82.98 E-value=7.6 Score=25.29 Aligned_cols=105 Identities=11% Similarity=0.139 Sum_probs=60.9
Q ss_pred eeeeecccc-hhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPG-DIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|++++ -+...+++.+.. .+.+|+.++.++...+...+.....+. .++.++..|+.+..
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~ 75 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHE---------AGARLIFTYAGERLEKSVHELAGTLDR-----NDSIILPCDVTNDAEIE 75 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHHTSSS-----CCCEEEECCCSSSHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHH---------CCCEEEEecCchHHHHHHHHHHHhcCC-----CCceEEeCCCCCHHHHH
Confidence 444554421 155555555431 267899999887655555555444331 16888888987642
Q ss_pred --CC-----CCCeeEEEEcccccc----------cc--CH-----------HHHHHHHHHhccCCcEEEEEec
Q psy890 79 --IE-----SDSYSAYTIAFGIRN----------VT--RI-----------DKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 --~~-----~~~~D~i~~~~~l~~----------~~--~~-----------~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+. .+.+|+++.+.+... .+ +. ...++.+.+.|+++|.++.+..
T Consensus 76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 76 TCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 10 136899988766532 00 11 1245566777888888887653
No 425
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.87 E-value=7.6 Score=25.23 Aligned_cols=76 Identities=9% Similarity=-0.067 Sum_probs=50.0
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.++.+++.++...+.+...+ .++.++..|+.+..
T Consensus 10 vlVTGa-s~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 10 VAVIGA-GDYIGAEIAKKFAA---------EGFTVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARNEDEVTA 73 (252)
T ss_dssp EEEECC-SSHHHHHHHHHHHH---------TTCEEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTCHHHHHH
T ss_pred EEEECC-CchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCCHHHHHH
Confidence 344444 44566666665531 36789999999888877777766543 27888999977642
Q ss_pred -C----CCCCeeEEEEccccc
Q psy890 79 -I----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~----~~~~~D~i~~~~~l~ 94 (131)
+ ..+..|+++.+.+..
T Consensus 74 ~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCCC
T ss_pred HHHHHHhhCCceEEEECCCcC
Confidence 0 015789999877653
No 426
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=82.47 E-value=7.8 Score=29.85 Aligned_cols=49 Identities=8% Similarity=-0.191 Sum_probs=33.9
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhh
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRAR 55 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~ 55 (131)
|+++|+-||.|-++.-+...-.... .....+.++|+++.+++.-+.+.+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~------~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSG------LKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHT------EEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHhCcccC------CceeEEEEEeCCHHHHHHHHHHCC
Confidence 5799999999998877755421000 002357899999999888877753
No 427
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=82.46 E-value=0.24 Score=33.59 Aligned_cols=30 Identities=30% Similarity=0.650 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHhccCCcEEEEEeccCCCcc
Q psy890 98 RIDKALSEAYRVLKPGGRFLCLEFSHVNNS 127 (131)
Q Consensus 98 ~~~~~l~~~~~~L~p~G~l~~~~~~~~~~~ 127 (131)
.+...|..+..+|+|||++.++.++.-+.+
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfHSLEDR 240 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFHSLEDR 240 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCcHHHH
Confidence 468889999999999999999888765443
No 428
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=82.37 E-value=11 Score=26.87 Aligned_cols=91 Identities=9% Similarity=0.003 Sum_probs=52.9
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc-----
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA----- 74 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----- 74 (131)
+||=+|+ |.|..+..+++.. +.++++++.+++-++.+++. +... -+.....|.
T Consensus 231 ~VlV~GasG~vG~~avqlak~~------------Ga~vi~~~~~~~~~~~~~~l----Ga~~----vi~~~~~d~~~~~~ 290 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAG------------GANPICVVSSPQKAEICRAM----GAEA----IIDRNAEGYRFWKD 290 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHHH----TCCE----EEETTTTTCCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCeEEEEECCHHHHHHHHhh----CCcE----EEecCcCccccccc
Confidence 3555565 4456666666663 56889999888777777542 2110 010001111
Q ss_pred -------------ccCC--CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 75 -------------EELP--IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 75 -------------~~~~--~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..+. .....+|+|+-.-+ ...+....+.|+++|+++++
T Consensus 291 ~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 291 ENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp TTEECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEES
T ss_pred ccccchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEE
Confidence 0000 12357999987543 14677888999999999875
No 429
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=82.33 E-value=8.3 Score=25.31 Aligned_cols=74 Identities=7% Similarity=-0.077 Sum_probs=46.9
Q ss_pred ecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----CC-
Q psy890 7 LVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----IE- 80 (131)
Q Consensus 7 g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 80 (131)
-.|+|.+...+++.+.. .+.+|++++.+++..+...+.+...+... ++.++..|+.+.. +.
T Consensus 38 TGasggIG~~la~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 38 TGASGGIGAAVARALVQ---------QGLKVVGCARTVGNIEELAAECKSAGYPG----TLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp ESTTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTTCSS----EEEEEECCTTCHHHHHHHHHH
T ss_pred ECCCchHHHHHHHHHHH---------CCCEEEEEECChHHHHHHHHHHHhcCCCc----eEEEEEecCCCHHHHHHHHHH
Confidence 34556667777666531 25789999999877766655555433221 6778888876532 11
Q ss_pred ----CCCeeEEEEcccc
Q psy890 81 ----SDSYSAYTIAFGI 93 (131)
Q Consensus 81 ----~~~~D~i~~~~~l 93 (131)
.+.+|+++.+.+.
T Consensus 105 ~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCC
Confidence 1368999987664
No 430
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.04 E-value=7.9 Score=25.43 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=43.5
Q ss_pred eeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh-ccCCCCCCCceeEEecccccCC--
Q psy890 3 ILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD-LFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 3 iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|=.|++ +|.+...+++.+.. .+.+|+.++.+++ .....+.+.. .+ .+.++..|+.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~---------~G~~V~~~~r~~~-~~~~~~~l~~~~~-------~~~~~~~D~~~~~~v 71 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFN---------QGATLAFTYLNES-LEKRVRPIAQELN-------SPYVYELDVSKEEHF 71 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHT---------TTCEEEEEESSTT-THHHHHHHHHHTT-------CCCEEECCTTCHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHH---------CCCEEEEEeCCHH-HHHHHHHHHHhcC-------CcEEEEcCCCCHHHH
Confidence 5555654 26677777776542 3578999998775 2222222222 12 4667778876532
Q ss_pred ---C-----CCCCeeEEEEccccc
Q psy890 79 ---I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 ---~-----~~~~~D~i~~~~~l~ 94 (131)
+ ..+..|+++.+.+..
T Consensus 72 ~~~~~~~~~~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 72 KSLYNSVKKDLGSLDFIVHSVAFA 95 (275)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCccC
Confidence 1 124689999877653
No 431
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.68 E-value=8.9 Score=25.20 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=61.2
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC------------HHHHHHHHHHhhhccCCCCCCCceeEE
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN------------RAMLDVGEQRARDLFKVPVPNPRLRFL 70 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (131)
+|=.| |+|.+...+++.+-. .+.+|+.+|.+ .+.++.....+...+ .++.++
T Consensus 13 vlVTG-as~gIG~~ia~~l~~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 76 (287)
T 3pxx_A 13 VLVTG-GARGQGRSHAVKLAE---------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG------RKAYTA 76 (287)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT------SCEEEE
T ss_pred EEEeC-CCChHHHHHHHHHHH---------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC------CceEEE
Confidence 34344 445566666665531 36789999987 656666555554433 278888
Q ss_pred ecccccCC-----CC-----CCCeeEEEEcccccccc------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 71 EANAEELP-----IE-----SDSYSAYTIAFGIRNVT------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 71 ~~d~~~~~-----~~-----~~~~D~i~~~~~l~~~~------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..|+.+.. +. .+..|+++.+.+..... + ....++.+.+.|+.+|.++.+.
T Consensus 77 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 77 EVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 88877642 10 13689999876653211 1 1234456667777888887653
No 432
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.98 E-value=10 Score=25.86 Aligned_cols=101 Identities=9% Similarity=-0.024 Sum_probs=51.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc--cCCCCCCCceeEEecccccCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL--FKVPVPNPRLRFLEANAEELP 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~ 78 (131)
|+|.-+|+| .+...++..+.. .+.+|+++|.+++.++..++..... ........++.....+..+.
T Consensus 5 mki~iiG~G--~~G~~~a~~L~~---------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 72 (359)
T 1bg6_A 5 KTYAVLGLG--NGGHAFAAYLAL---------KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA- 72 (359)
T ss_dssp CEEEEECCS--HHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH-
T ss_pred CeEEEECCC--HHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH-
Confidence 467777764 455555544421 1457999999988777665442100 00000000000011121110
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
-..+|+|+..-.-. .....+.++...++++..++.
T Consensus 73 --~~~~D~vi~~v~~~---~~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 73 --VKDADVILIVVPAI---HHASIAANIASYISEGQLIIL 107 (359)
T ss_dssp --HTTCSEEEECSCGG---GHHHHHHHHGGGCCTTCEEEE
T ss_pred --HhcCCEEEEeCCch---HHHHHHHHHHHhCCCCCEEEE
Confidence 13579888754332 235667788888888776554
No 433
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=80.76 E-value=2.5 Score=27.57 Aligned_cols=46 Identities=15% Similarity=0.196 Sum_probs=26.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHH
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQR 53 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~ 53 (131)
|+|.-||+ |.....++..+.+... ....+++++|.+++..+...+.
T Consensus 3 ~~i~iIG~--G~mG~~~a~~l~~~g~-----~~~~~V~~~~r~~~~~~~~~~~ 48 (247)
T 3gt0_A 3 KQIGFIGC--GNMGMAMIGGMINKNI-----VSSNQIICSDLNTANLKNASEK 48 (247)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTS-----SCGGGEEEECSCHHHHHHHHHH
T ss_pred CeEEEECc--cHHHHHHHHHHHhCCC-----CCCCeEEEEeCCHHHHHHHHHH
Confidence 35666665 4566656555431000 0113799999999877766543
No 434
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.69 E-value=6.5 Score=25.20 Aligned_cols=89 Identities=8% Similarity=0.031 Sum_probs=53.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
.|+=+| .|..+..+++.+.. .+. ++++|.+++.++.+. . .+.++.+|..+..
T Consensus 11 ~viI~G--~G~~G~~la~~L~~---------~g~-v~vid~~~~~~~~~~------~-------~~~~i~gd~~~~~~l~ 65 (234)
T 2aef_A 11 HVVICG--WSESTLECLRELRG---------SEV-FVLAEDENVRKKVLR------S-------GANFVHGDPTRVSDLE 65 (234)
T ss_dssp EEEEES--CCHHHHHHHHHSTT---------SEE-EEEESCGGGHHHHHH------T-------TCEEEESCTTCHHHHH
T ss_pred EEEEEC--CChHHHHHHHHHHh---------CCe-EEEEECCHHHHHHHh------c-------CCeEEEcCCCCHHHHH
Confidence 344455 47888888888752 245 999999887665543 1 4667777765432
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
..-..+|.|++...- ......+....+.+.|+..++.
T Consensus 66 ~a~i~~ad~vi~~~~~---d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 66 KANVRGARAVIVDLES---DSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HTTCTTCSEEEECCSC---HHHHHHHHHHHHHHCSSSEEEE
T ss_pred hcCcchhcEEEEcCCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 123468888875321 1222334455666777766654
No 435
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.57 E-value=9.4 Score=24.76 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=61.2
Q ss_pred ceeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 2 YILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
++|=.|++ +|.+...+++.+-. .+.+++.++.+....+...+.....+ ++.++..|+.+..
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v 79 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKR---------EGAELAFTYVGDRFKDRITEFAAEFG-------SELVFPCDVADDAQI 79 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHH---------TTCEEEEEESSGGGHHHHHHHHHHTT-------CCCEEECCTTCHHHH
T ss_pred EEEEeCCCCCCcHHHHHHHHHHH---------cCCCEEEEecchhhHHHHHHHHHHcC-------CcEEEECCCCCHHHH
Confidence 34555653 25566666665531 26789999988655555544444433 5778888877642
Q ss_pred ---C-----CCCCeeEEEEccccccc-----------c--C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ---I-----ESDSYSAYTIAFGIRNV-----------T--R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ---~-----~~~~~D~i~~~~~l~~~-----------~--~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ..+..|+++.+.+.... + + ....++.+.+.|+++|.++++.
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 80 DALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1 12478999987765321 1 1 1234455666777788877764
No 436
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=80.56 E-value=12 Score=26.18 Aligned_cols=91 Identities=16% Similarity=0.093 Sum_probs=51.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
.||.++.+-|.++..+.. ..+++.+.-|...... +..+++. ... ... .....
T Consensus 48 ~~l~~n~~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~----l~~~~~~------~~~-~~~---~~~~~ 99 (381)
T 3dmg_A 48 RALDLNPGVGWGSLPLEG--------------RMAVERLETSRAAFRC----LTASGLQ------ARL-ALP---WEAAA 99 (381)
T ss_dssp EEEESSCTTSTTTGGGBT--------------TBEEEEEECBHHHHHH----HHHTTCC------CEE-CCG---GGSCT
T ss_pred cEEEecCCCCccccccCC--------------CCceEEEeCcHHHHHH----HHHcCCC------ccc-cCC---ccCCc
Confidence 356666666655444432 3467777655544433 3344432 211 111 11234
Q ss_pred CCeeEEEEccccc-cccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIR-NVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~-~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..||+|+....-+ ........|.++.+.|+|||.++++-
T Consensus 100 ~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 100 GAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp TCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 6799998754422 11234667888899999999988753
No 437
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.52 E-value=10 Score=25.10 Aligned_cols=71 Identities=11% Similarity=0.060 Sum_probs=48.3
Q ss_pred ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----------
Q psy890 9 FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---------- 78 (131)
Q Consensus 9 G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------- 78 (131)
|++-+...+++.+-+ .+.+|...|.+++.++...+.+...+ .++.++..|+.+..
T Consensus 17 as~GIG~aia~~la~---------~Ga~Vvi~~~~~~~~~~~~~~l~~~g------~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 17 SARGLGFAYAEGLAA---------AGARVILNDIRATLLAESVDTLTRKG------YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp CSSHHHHHHHHHHHH---------TTCEEEECCSCHHHHHHHHHHHHHTT------CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 334455555555431 37899999999998888777776654 26888888876632
Q ss_pred CCCCCeeEEEEccccc
Q psy890 79 IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~ 94 (131)
-.-+..|+++.+.+..
T Consensus 82 ~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 82 AEGIHVDILINNAGIQ 97 (255)
T ss_dssp HTTCCCCEEEECCCCC
T ss_pred HHCCCCcEEEECCCCC
Confidence 1235789999987654
No 438
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.46 E-value=10 Score=25.05 Aligned_cols=71 Identities=11% Similarity=-0.011 Sum_probs=46.8
Q ss_pred cccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC--------
Q psy890 8 VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-------- 79 (131)
Q Consensus 8 ~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 79 (131)
.|+|.+...+++.+-. .+.+|+.++.+++..+...+.+...+ .++.++..|+.+...
T Consensus 40 Gas~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 40 GSSRGIGAAIAEGLAG---------AGAHVILHGVKPGSTAAVQQRIIASG------GTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TCSSHHHHHHHHHHHH---------TTCEEEEEESSTTTTHHHHHHHHHTT------CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHHhcC------CeEEEEEecCCCHHHHHHHHHHH
Confidence 3445566666665531 36789999998877777666665433 278888888876430
Q ss_pred -CCCCeeEEEEcccc
Q psy890 80 -ESDSYSAYTIAFGI 93 (131)
Q Consensus 80 -~~~~~D~i~~~~~l 93 (131)
..+..|+++.+.+.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 11468999987765
No 439
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.19 E-value=5.1 Score=26.04 Aligned_cols=78 Identities=9% Similarity=-0.040 Sum_probs=48.6
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.++.+++..+...+.+....... .++.++..|+.+..
T Consensus 10 ~lVTGa-s~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 10 AIITGA-SQGIGAVIAAGLAT---------DGYRVVLIARSKQNLEKVHDEIMRSNKHV---QEPIVLPLDITDCTKADT 76 (250)
T ss_dssp EEEEST-TSHHHHHHHHHHHH---------HTCEEEEEESCHHHHHHHHHHHHHHCTTS---CCCEEEECCTTCHHHHHH
T ss_pred EEEECC-CcHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHHhcccc---CcceEEeccCCCHHHHHH
Confidence 344444 44455555555431 25789999999988887776665432110 16788888877642
Q ss_pred -C-----CCCCeeEEEEcccc
Q psy890 79 -I-----ESDSYSAYTIAFGI 93 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l 93 (131)
+ ..+..|+++.+.+.
T Consensus 77 ~~~~~~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 77 EIKDIHQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHHHHHHCCEEEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCc
Confidence 1 11468999987765
No 440
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=80.17 E-value=7.5 Score=26.59 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=51.7
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+||-+|+ |.|..+..+++.. +.+++++ .+++-++.+++. +. .. +. +..+..
T Consensus 153 ~VlV~Ga~g~iG~~~~q~a~~~------------Ga~Vi~~-~~~~~~~~~~~l----Ga------~~--i~-~~~~~~~ 206 (343)
T 3gaz_A 153 TVLIQGGGGGVGHVAIQIALAR------------GARVFAT-ARGSDLEYVRDL----GA------TP--ID-ASREPED 206 (343)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------------TCEEEEE-ECHHHHHHHHHH----TS------EE--EE-TTSCHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHC------------CCEEEEE-eCHHHHHHHHHc----CC------CE--ec-cCCCHHH
Confidence 4666663 4566677777664 4689999 787766665432 21 11 21 111110
Q ss_pred -----CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 -----IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 -----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.....+|+|+-..+- ..+....+.|+++|+++.+
T Consensus 207 ~~~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 207 YAAEHTAGQGFDLVYDTLGG-------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHHHHTTSCEEEEEESSCT-------HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhcCCCceEEEECCCc-------HHHHHHHHHHhcCCeEEEE
Confidence 123469999875441 3577888899999998864
No 441
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=79.73 E-value=8.3 Score=26.24 Aligned_cols=85 Identities=7% Similarity=0.005 Sum_probs=52.9
Q ss_pred cccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----CCCCC
Q psy890 8 VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP----IESDS 83 (131)
Q Consensus 8 ~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 83 (131)
||.|..+..+++.+.+ .+. ++++|.+++.++ +++ . .+.++.+|..+.. ..-+.
T Consensus 121 ~G~G~~g~~l~~~L~~---------~g~-v~vid~~~~~~~-~~~-----~-------~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 121 CGWSESTLECLRELRG---------SEV-FVLAEDENVRKK-VLR-----S-------GANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp ESCCHHHHHHHTTGGG---------SCE-EEEESCGGGHHH-HHH-----T-------TCEEEESCTTSHHHHHHTCSTT
T ss_pred ECCcHHHHHHHHHHHh---------CCc-EEEEeCChhhhh-HHh-----C-------CcEEEEeCCCCHHHHHhcChhh
Confidence 4568888888887752 245 999999998776 432 1 5677888876532 22356
Q ss_pred eeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 84 YSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 84 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
+|.+++... -+..........+.+.|...++.
T Consensus 178 a~~vi~~~~---~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 178 ARAVIVDLE---SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEEEEECCS---SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred ccEEEEcCC---ccHHHHHHHHHHHHHCCCCeEEE
Confidence 898887532 11222334445566777766654
No 442
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=79.54 E-value=11 Score=25.06 Aligned_cols=102 Identities=9% Similarity=0.024 Sum_probs=59.5
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC--HHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN--RAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|=.| |+|.+...+++.+-. .+.+|+.++.+ ....+...+..+..+ .++.++..|+.+..
T Consensus 52 vlVTG-as~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v 115 (294)
T 3r3s_A 52 ALVTG-GDSGIGRAAAIAYAR---------EGADVAINYLPAEEEDAQQVKALIEECG------RKAVLLPGDLSDESFA 115 (294)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEECCGGGHHHHHHHHHHHHHTT------CCEEECCCCTTSHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCcchhHHHHHHHHHHHcC------CcEEEEEecCCCHHHH
Confidence 34344 455566666665531 36788888876 334444444444332 26888888877642
Q ss_pred ---C-----CCCCeeEEEEcccccc-cc--------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ---I-----ESDSYSAYTIAFGIRN-VT--------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ---~-----~~~~~D~i~~~~~l~~-~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ..+..|+++.+.+... .. + ....++.+.+.|+++|.++.+.
T Consensus 116 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 116 RSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1 0146899998776532 11 1 1234556667788889887764
No 443
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=79.50 E-value=11 Score=24.75 Aligned_cols=103 Identities=16% Similarity=0.089 Sum_probs=60.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-CHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+++.++. +....+...+.+...+ .++.++..|+.+..
T Consensus 21 ~lVTGa-s~gIG~aia~~l~~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~ 84 (270)
T 3is3_A 21 ALVTGS-GRGIGAAVAVHLGR---------LGAKVVVNYANSTKDAEKVVSEIKALG------SDAIAIKADIRQVPEIV 84 (270)
T ss_dssp EEESCT-TSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHH
T ss_pred EEEECC-CchHHHHHHHHHHH---------CCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHH
Confidence 344444 44555666555431 3678888775 4555555555555433 27888888877642
Q ss_pred --C-----CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 --I-----ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 --~-----~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+ ..+..|+++.+.+..... + .....+.+.+.|+++|.++++..
T Consensus 85 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 85 KLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1 113689999876653221 1 12345667778888898887654
No 444
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=78.81 E-value=2.7 Score=25.20 Aligned_cols=93 Identities=13% Similarity=0.064 Sum_probs=48.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|+=+|+ |.++..+++.+.. .+.+++++|.+++.++.+++ .. ....+..|..+..
T Consensus 21 ~v~IiG~--G~iG~~la~~L~~---------~g~~V~vid~~~~~~~~~~~---~~--------g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 21 YIVIFGC--GRLGSLIANLASS---------SGHSVVVVDKNEYAFHRLNS---EF--------SGFTVVGDAAEFETLK 78 (155)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESCGGGGGGSCT---TC--------CSEEEESCTTSHHHHH
T ss_pred cEEEECC--CHHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHh---cC--------CCcEEEecCCCHHHHH
Confidence 4566665 6677777666531 24689999998754332210 11 2344444433211
Q ss_pred -CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 79 -IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 79 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
..-..+|+|+....- ......+..+.+.+.+...++..
T Consensus 79 ~~~~~~ad~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 79 ECGMEKADMVFAFTND---DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp TTTGGGCSEEEECSSC---HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred HcCcccCCEEEEEeCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 112458988875432 12233344445555565666543
No 445
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=78.55 E-value=4.6 Score=27.67 Aligned_cols=81 Identities=7% Similarity=0.039 Sum_probs=47.6
Q ss_pred cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----C-CCCC
Q psy890 10 PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----I-ESDS 83 (131)
Q Consensus 10 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~ 83 (131)
.|..+..+++.. +.++++++.+++-++.+++. +. . ..+..+-.++. . ....
T Consensus 177 vG~~a~qla~~~------------Ga~Vi~~~~~~~~~~~~~~~----Ga------~-~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 177 LCKLIIGLAKEE------------GFRPIVTVRRDEQIALLKDI----GA------A-HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp HHHHHHHHHHHH------------TCEEEEEESCGGGHHHHHHH----TC------S-EEEETTSTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC------------CCEEEEEeCCHHHHHHHHHc----CC------C-EEEECCcHHHHHHHHHHhcCCC
Confidence 445556666654 46899999988877776532 21 1 11111111110 0 1136
Q ss_pred eeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 84 YSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 84 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+|+|+-..+- ..+.++.+.|+++|+++++-
T Consensus 234 ~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 234 PRIFLDAVTG-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCEEEESSCH-------HHHHHHHHHSCTTCEEEECC
T ss_pred CcEEEECCCC-------hhHHHHHhhhcCCCEEEEEe
Confidence 8999875542 23467788999999998764
No 446
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=78.43 E-value=11 Score=24.19 Aligned_cols=76 Identities=16% Similarity=0.062 Sum_probs=50.2
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.+ .+.+++.++.+++..+...+.+...+ .++.++..|+.+..
T Consensus 8 vlITG-as~gIG~~~a~~l~~---------~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~ 71 (247)
T 3lyl_A 8 ALVTG-ASRGIGFEVAHALAS---------KGATVVGTATSQASAEKFENSMKEKG------FKARGLVLNISDIESIQN 71 (247)
T ss_dssp EEESS-CSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHH
T ss_pred EEEEC-CCChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHH
Confidence 44444 455566666665531 36789999999988887777666543 27888888877642
Q ss_pred ------CCCCCeeEEEEccccc
Q psy890 79 ------IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 ------~~~~~~D~i~~~~~l~ 94 (131)
...+.+|+++.+.+..
T Consensus 72 ~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 72 FFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 1124689999876653
No 447
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=78.35 E-value=1 Score=31.87 Aligned_cols=37 Identities=8% Similarity=0.037 Sum_probs=21.6
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
...|+|+..-....-+.+.-+-+++.+.||||++++=
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 4689998753222111111123577888999987763
No 448
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.19 E-value=6.2 Score=27.51 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=49.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|.-|| .|.....++..+.. .+.+|+++|.+++.++.+.+. + +.. ..+..+..-..
T Consensus 24 kIgiIG--lG~mG~~~A~~L~~---------~G~~V~v~dr~~~~~~~l~~~----g--------~~~-~~s~~e~~~~a 79 (358)
T 4e21_A 24 QIGMIG--LGRMGADMVRRLRK---------GGHECVVYDLNVNAVQALERE----G--------IAG-ARSIEEFCAKL 79 (358)
T ss_dssp EEEEEC--CSHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHHTT----T--------CBC-CSSHHHHHHHS
T ss_pred EEEEEC--chHHHHHHHHHHHh---------CCCEEEEEeCCHHHHHHHHHC----C--------CEE-eCCHHHHHhcC
Confidence 455555 56676666665531 256899999999776655432 1 111 11222211111
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
...|+|+..-.-. .....+..+...++++.+++
T Consensus 80 ~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 80 VKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp CSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEE
T ss_pred CCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 2358887754322 45666777888888876654
No 449
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=78.15 E-value=13 Score=24.81 Aligned_cols=91 Identities=11% Similarity=0.007 Sum_probs=49.7
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
|+|.-||+ |.....++..+.... +...+++++|.+++..+...+.+ .+... .+..+.
T Consensus 4 ~~I~iIG~--G~mG~aia~~l~~~g------~~~~~V~v~dr~~~~~~~l~~~~-----------gi~~~-~~~~~~--- 60 (280)
T 3tri_A 4 SNITFIGG--GNMARNIVVGLIANG------YDPNRICVTNRSLDKLDFFKEKC-----------GVHTT-QDNRQG--- 60 (280)
T ss_dssp SCEEEESC--SHHHHHHHHHHHHTT------CCGGGEEEECSSSHHHHHHHHTT-----------CCEEE-SCHHHH---
T ss_pred CEEEEEcc--cHHHHHHHHHHHHCC------CCCCeEEEEeCCHHHHHHHHHHc-----------CCEEe-CChHHH---
Confidence 35666666 556666655543100 01237999999998776665432 22221 121111
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHh-ccCCcEEE
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRV-LKPGGRFL 117 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~-L~p~G~l~ 117 (131)
-...|+|+..--- ......+.++... ++++..++
T Consensus 61 ~~~aDvVilav~p---~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 61 ALNADVVVLAVKP---HQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp HSSCSEEEECSCG---GGHHHHHHHHHHHHHTTTCEEE
T ss_pred HhcCCeEEEEeCH---HHHHHHHHHHHhhccCCCeEEE
Confidence 1236888875422 3456677778777 77665554
No 450
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=77.98 E-value=12 Score=24.66 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=46.5
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-CHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC--
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI-- 79 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 79 (131)
+|=.| |+|.+...+++.+-. .+.+++.++. +++..+...+.+...+ .++.++..|+.+...
T Consensus 32 ~lVTG-as~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~ 95 (280)
T 4da9_A 32 AIVTG-GRRGIGLGIARALAA---------SGFDIAITGIGDAEGVAPVIAELSGLG------ARVIFLRADLADLSSHQ 95 (280)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEEESCCHHHHHHHHHHHHHTT------CCEEEEECCTTSGGGHH
T ss_pred EEEec-CCCHHHHHHHHHHHH---------CCCeEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHH
Confidence 34344 445566666665531 3678999985 6666666655555433 278889999876431
Q ss_pred ---C-----CCCeeEEEEcccc
Q psy890 80 ---E-----SDSYSAYTIAFGI 93 (131)
Q Consensus 80 ---~-----~~~~D~i~~~~~l 93 (131)
. .+..|+++.+.+.
T Consensus 96 ~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 96 ATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHHcCCCCEEEECCCc
Confidence 0 1368999987765
No 451
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=77.91 E-value=1.9 Score=29.14 Aligned_cols=42 Identities=24% Similarity=0.460 Sum_probs=29.0
Q ss_pred CCeeEEEEccc----ccccc-------CHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 82 DSYSAYTIAFG----IRNVT-------RIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 82 ~~~D~i~~~~~----l~~~~-------~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
+.||+|+++.. .||.. .....-....+.|+|||.+++.-++.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 68999998643 34432 23344456778999999999876654
No 452
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.16 E-value=14 Score=24.72 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=47.4
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.+ .+.+|+.++.+++..+...+.+...+... .++.++..|+.+..
T Consensus 29 vlVTG-as~gIG~aia~~L~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~~Dv~d~~~v~~ 95 (297)
T 1xhl_A 29 VIITG-SSNGIGRSAAVIFAK---------EGAQVTITGRNEDRLEETKQQILKAGVPA---EKINAVVADVTEASGQDD 95 (297)
T ss_dssp EEETT-CSSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEECCTTSHHHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcCCCC---ceEEEEecCCCCHHHHHH
Confidence 34334 455566666666531 36789999999877776655554432100 15778888876542
Q ss_pred -CC-----CCCeeEEEEcccc
Q psy890 79 -IE-----SDSYSAYTIAFGI 93 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l 93 (131)
+. -+.+|+++.+.+.
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 96 IINTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCc
Confidence 11 1368999987664
No 453
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.15 E-value=6.8 Score=25.70 Aligned_cols=78 Identities=9% Similarity=-0.027 Sum_probs=45.4
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.. .+.+|+.++.+++.++...+.+....... .++.++..|+.+..
T Consensus 9 vlVTG-as~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~ 75 (278)
T 1spx_A 9 AIITG-SSNGIGRATAVLFAR---------EGAKVTITGRHAERLEETRQQILAAGVSE---QNVNSVVADVTTDAGQDE 75 (278)
T ss_dssp EEETT-TTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEECCTTSHHHHHH
T ss_pred EEEeC-CCchHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcccCC---CceeEEecccCCHHHHHH
Confidence 33334 455566666665531 26789999999877766555542111000 16788888876532
Q ss_pred -CC-----CCCeeEEEEcccc
Q psy890 79 -IE-----SDSYSAYTIAFGI 93 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l 93 (131)
+. -+.+|+++.+.+.
T Consensus 76 ~~~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 76 ILSTTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 11 1368999987664
No 454
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=77.07 E-value=14 Score=24.62 Aligned_cols=102 Identities=12% Similarity=0.029 Sum_probs=58.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHH-HHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRA-MLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.| |+|.+...+++.+-. .+.+|+.++.+++ ..+...+.....+ .++.++..|+.+..
T Consensus 50 vlVTG-as~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~ 113 (291)
T 3ijr_A 50 VLITG-GDSGIGRAVSIAFAK---------EGANIAIAYLDEEGDANETKQYVEKEG------VKCVLLPGDLSDEQHCK 113 (291)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHTTT------CCEEEEESCTTSHHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCchHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHH
Confidence 34444 445566666665531 3678999998764 3333333333332 27888888877642
Q ss_pred --C-----CCCCeeEEEEccccccc-------c--C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 --I-----ESDSYSAYTIAFGIRNV-------T--R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 --~-----~~~~~D~i~~~~~l~~~-------~--~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ..+..|+++.+.+.... + + ....++.+.+.|+++|.++.+.
T Consensus 114 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 114 DIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 1 11368999987554221 1 1 1234556667778888887654
No 455
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=76.93 E-value=13 Score=25.04 Aligned_cols=86 Identities=15% Similarity=0.098 Sum_probs=47.0
Q ss_pred eeeee-c-ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-CCC
Q psy890 3 ILFYL-V-FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LPI 79 (131)
Q Consensus 3 iLdig-~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 79 (131)
||=+| + +.|..+..+++.. +.++++++ +++-.+.+++ .+.. ..+..+-.+ +..
T Consensus 156 vlV~Ga~G~vG~~a~q~a~~~------------Ga~vi~~~-~~~~~~~~~~----lGa~-------~~i~~~~~~~~~~ 211 (321)
T 3tqh_A 156 VLIHAGAGGVGHLAIQLAKQK------------GTTVITTA-SKRNHAFLKA----LGAE-------QCINYHEEDFLLA 211 (321)
T ss_dssp EEESSTTSHHHHHHHHHHHHT------------TCEEEEEE-CHHHHHHHHH----HTCS-------EEEETTTSCHHHH
T ss_pred EEEEcCCcHHHHHHHHHHHHc------------CCEEEEEe-ccchHHHHHH----cCCC-------EEEeCCCcchhhh
Confidence 45554 2 4466677777664 45888887 4544444433 2311 111111111 111
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.-..+|+|+-.-+- ..+.+..+.|+++|+++.+
T Consensus 212 ~~~g~D~v~d~~g~-------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 212 ISTPVDAVIDLVGG-------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CCSCEEEEEESSCH-------HHHHHHGGGEEEEEEEEEC
T ss_pred hccCCCEEEECCCc-------HHHHHHHHhccCCCEEEEe
Confidence 11469999875431 2237788999999998865
No 456
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=76.52 E-value=16 Score=25.31 Aligned_cols=100 Identities=7% Similarity=-0.014 Sum_probs=53.5
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhcc-CCCC-CCCceeEEecccccCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLF-KVPV-PNPRLRFLEANAEELP 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~d~~~~~ 78 (131)
|+|.-+|+ |.+...++..+.. .+.+|+.+|.+++.++..++.-.... .+.. ...++.+. .|..+.
T Consensus 30 mkI~VIGa--G~mG~alA~~La~---------~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea- 96 (356)
T 3k96_A 30 HPIAILGA--GSWGTALALVLAR---------KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS- 96 (356)
T ss_dssp SCEEEECC--SHHHHHHHHHHHT---------TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH-
T ss_pred CeEEEECc--cHHHHHHHHHHHH---------CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH-
Confidence 34555655 5576666665531 14579999999887776655321110 0000 00022221 122111
Q ss_pred CCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 79 IESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
-...|+|+..-.-. .....+.++...++|+..++.
T Consensus 97 --~~~aDvVilaVp~~---~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 97 --LEGVTDILIVVPSF---AFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp --HTTCCEEEECCCHH---HHHHHHHHHGGGCCTTCEEEE
T ss_pred --HhcCCEEEECCCHH---HHHHHHHHHHHhcCCCCEEEE
Confidence 13468888753222 456778888888888876654
No 457
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=76.46 E-value=7.6 Score=21.44 Aligned_cols=68 Identities=21% Similarity=0.133 Sum_probs=41.6
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCC-CeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|+-+|+ |.....+++.+.. .+ .+++++|.+++-.+... . . .+.+...|..+..
T Consensus 7 ~v~I~G~--G~iG~~~~~~l~~---------~g~~~v~~~~r~~~~~~~~~----~-~-------~~~~~~~d~~~~~~~ 63 (118)
T 3ic5_A 7 NICVVGA--GKIGQMIAALLKT---------SSNYSVTVADHDLAALAVLN----R-M-------GVATKQVDAKDEAGL 63 (118)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------CSSEEEEEEESCHHHHHHHH----T-T-------TCEEEECCTTCHHHH
T ss_pred eEEEECC--CHHHHHHHHHHHh---------CCCceEEEEeCCHHHHHHHH----h-C-------CCcEEEecCCCHHHH
Confidence 5666776 6677777666531 13 68999999987665543 1 1 4566666655421
Q ss_pred -CCCCCeeEEEEccc
Q psy890 79 -IESDSYSAYTIAFG 92 (131)
Q Consensus 79 -~~~~~~D~i~~~~~ 92 (131)
..-..+|+|+....
T Consensus 64 ~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 64 AKALGGFDAVISAAP 78 (118)
T ss_dssp HHHTTTCSEEEECSC
T ss_pred HHHHcCCCEEEECCC
Confidence 01136899987654
No 458
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=76.21 E-value=0.32 Score=33.20 Aligned_cols=29 Identities=28% Similarity=0.651 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHhccCCcEEEEEeccCCCc
Q psy890 98 RIDKALSEAYRVLKPGGRFLCLEFSHVNN 126 (131)
Q Consensus 98 ~~~~~l~~~~~~L~p~G~l~~~~~~~~~~ 126 (131)
.++..|..+...|+|||++.++.++.-+.
T Consensus 223 ~l~~~l~~~~~~l~~ggr~~visfhsled 251 (301)
T 1m6y_A 223 NLKEFLKKAEDLLNPGGRIVVISFHSLED 251 (301)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHhhCCCCEEEEEecCcHHH
Confidence 46788999999999999999988765443
No 459
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=76.16 E-value=13 Score=24.10 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=47.6
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+.. .+.+|+.++.+++..+...+.+...+ .++.++..|+.+..
T Consensus 10 vlVTG-as~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~ 73 (262)
T 1zem_A 10 CLVTG-AGGNIGLATALRLAE---------EGTAIALLDMNREALEKAEASVREKG------VEARSYVCDVTSEEAVIG 73 (262)
T ss_dssp EEEET-TTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHTTT------SCEEEEECCTTCHHHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHH
Confidence 44344 455566666665531 26789999999877776655554432 16788888876532
Q ss_pred -CC-----CCCeeEEEEccccc
Q psy890 79 -IE-----SDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~~-----~~~~D~i~~~~~l~ 94 (131)
+. -+.+|+++.+.+..
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 74 TVDSVVRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHhCCCCEEEECCCCC
Confidence 00 13689999876643
No 460
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=76.01 E-value=6.8 Score=25.67 Aligned_cols=101 Identities=14% Similarity=0.247 Sum_probs=58.0
Q ss_pred eeeeec-ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHH-HHHHHHHhhhccCCCCCCCceeEEecccccCC--
Q psy890 3 ILFYLV-FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAM-LDVGEQRARDLFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 3 iLdig~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|=.|+ |+|.+...+++.+.+ .+.+|+.++.+++. .+...+.. + .++.++..|+.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~---~------~~~~~~~~Dv~~~~~v 71 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQE---------QGAQLVLTGFDRLRLIQRITDRL---P------AKAPLLELDVQNEEHL 71 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHH---------TTCEEEEEECSCHHHHHHHHTTS---S------SCCCEEECCTTCHHHH
T ss_pred EEEECCCCCCchHHHHHHHHHH---------CCCEEEEEecChHHHHHHHHHhc---C------CCceEEEccCCCHHHH
Confidence 555666 366677777766531 35789999987643 23322221 1 15677888876532
Q ss_pred ---CC-----CC---CeeEEEEcccccc--------cc-----CH-----------HHHHHHHHHhccCCcEEEEEec
Q psy890 79 ---IE-----SD---SYSAYTIAFGIRN--------VT-----RI-----------DKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 ---~~-----~~---~~D~i~~~~~l~~--------~~-----~~-----------~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+. -+ .+|+++.+.+... +. ++ ....+.+.+.|+++|.++.+..
T Consensus 72 ~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 72 ASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 11 12 7999998776532 11 11 1234555666677788877653
No 461
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=75.77 E-value=1.2 Score=31.71 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=21.6
Q ss_pred CeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 83 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 83 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
..|+|+....+..-+.+.-+-+++.+.||||++++=
T Consensus 275 ~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 275 KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVD 310 (405)
T ss_dssp TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEE
Confidence 579998753322211221123577888999998764
No 462
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=75.40 E-value=14 Score=24.07 Aligned_cols=78 Identities=12% Similarity=0.012 Sum_probs=48.4
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.| |+|.+...+++.+-. .+.+|+.++.+++..+...+.+....... .+.++..|+.+..
T Consensus 13 ~lVTG-as~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~----~~~~~~~D~~~~~~~~~ 78 (267)
T 3t4x_A 13 ALVTG-STAGIGKAIATSLVA---------EGANVLINGRREENVNETIKEIRAQYPDA----ILQPVVADLGTEQGCQD 78 (267)
T ss_dssp EEETT-CSSHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHHHHHCTTC----EEEEEECCTTSHHHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHhhCCCc----eEEEEecCCCCHHHHHH
Confidence 34444 445566666665431 36789999999988777766665543221 5777788876532
Q ss_pred -C-CCCCeeEEEEccccc
Q psy890 79 -I-ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~-~~~~~D~i~~~~~l~ 94 (131)
+ .-+..|+++.+.+..
T Consensus 79 ~~~~~g~id~lv~nAg~~ 96 (267)
T 3t4x_A 79 VIEKYPKVDILINNLGIF 96 (267)
T ss_dssp HHHHCCCCSEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 1 124689999876653
No 463
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=74.86 E-value=21 Score=25.73 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=52.1
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhc-------c-CCCC-C-CCceeEEec
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDL-------F-KVPV-P-NPRLRFLEA 72 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-------~-~~~~-~-~~~~~~~~~ 72 (131)
|.-||+| .....++..+.. .+.+|+++|.+++.++.+++..... + .... . .....+ ..
T Consensus 40 V~VIGaG--~MG~~iA~~la~---------~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~ 107 (463)
T 1zcj_A 40 VGVLGLG--TMGRGIAISFAR---------VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SS 107 (463)
T ss_dssp EEEECCS--HHHHHHHHHHHT---------TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ES
T ss_pred EEEECcC--HHHHHHHHHHHh---------CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cC
Confidence 4455554 454444444321 2568999999999888776543210 0 0000 0 001222 33
Q ss_pred ccccCCCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 73 NAEELPIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 73 d~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
|... -...|+|+..-. ....-....+.++...++|+.++..
T Consensus 108 ~~~~----~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 108 STKE----LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp CGGG----GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CHHH----HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 3322 134799887542 1111135677788888888876653
No 464
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=74.52 E-value=9.7 Score=24.78 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=42.4
Q ss_pred eeeeecc-cchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVF-PGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|++ +|.+...+++.+.+ .+.+|+.++.++...+...+.....+ .+.++..|+.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~~~l~~~~~-------~~~~~~~D~~~~~~v~ 74 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKE---------AGAEVALSYQAERLRPEAEKLAEALG-------GALLFRADVTQDEELD 74 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHH---------HTCEEEEEESCGGGHHHHHHHHHHTT-------CCEEEECCTTCHHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHHHhcC-------CcEEEECCCCCHHHHH
Confidence 5555654 25566666665431 25789999988752222222211112 4677788876532
Q ss_pred --CC-----CCCeeEEEEccccc
Q psy890 79 --IE-----SDSYSAYTIAFGIR 94 (131)
Q Consensus 79 --~~-----~~~~D~i~~~~~l~ 94 (131)
+. -+.+|+++.+.+..
T Consensus 75 ~~~~~~~~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 75 ALFAGVKEAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 11 13689999877653
No 465
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=74.48 E-value=11 Score=26.45 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=49.9
Q ss_pred eecccchhhHHHhhhhcCCCCCCCCCCCC-CeEEEEeCCHHHHHHHHHHhhhccC-CCCCCCceeEEecccccCC-----
Q psy890 6 YLVFPGDIAFRFLNYVDKLPPNTLSEHCA-PHVTVADINRAMLDVGEQRARDLFK-VPVPNPRLRFLEANAEELP----- 78 (131)
Q Consensus 6 ig~G~G~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~D~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~----- 78 (131)
|-.|+|.+...+++.+.. .+ .++++++.++.........+..... .. .++.++.+|+.+..
T Consensus 40 VTGatG~IG~~l~~~L~~---------~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~---~~v~~~~~Dl~d~~~~~~~ 107 (399)
T 3nzo_A 40 VLGGAGSIGQAVTKEIFK---------RNPQKLHVVDISENNMVELVRDIRSSFGYIN---GDFQTFALDIGSIEYDAFI 107 (399)
T ss_dssp EETTTSHHHHHHHHHHHT---------TCCSEEEEECSCHHHHHHHHHHHHHHTCCCS---SEEEEECCCTTSHHHHHHH
T ss_pred EEcCChHHHHHHHHHHHH---------CCCCEEEEEECCcchHHHHHHHHHHhcCCCC---CcEEEEEEeCCCHHHHHHH
Confidence 344678888888887752 13 5899999999877666555443211 00 27888999987642
Q ss_pred CCCCCeeEEEEcccc
Q psy890 79 IESDSYSAYTIAFGI 93 (131)
Q Consensus 79 ~~~~~~D~i~~~~~l 93 (131)
+....+|+|+.....
T Consensus 108 ~~~~~~D~Vih~Aa~ 122 (399)
T 3nzo_A 108 KADGQYDYVLNLSAL 122 (399)
T ss_dssp HHCCCCSEEEECCCC
T ss_pred HHhCCCCEEEECCCc
Confidence 223568999876554
No 466
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=74.44 E-value=16 Score=24.17 Aligned_cols=86 Identities=16% Similarity=0.182 Sum_probs=48.3
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIES 81 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 81 (131)
+|.-||+ +|.....++..+.. .+.+++++|.+++..+.+.+ .+. .. .+..+. -
T Consensus 13 ~I~iIG~-tG~mG~~la~~l~~---------~g~~V~~~~r~~~~~~~~~~----~g~------~~----~~~~~~---~ 65 (286)
T 3c24_A 13 TVAILGA-GGKMGARITRKIHD---------SAHHLAAIEIAPEGRDRLQG----MGI------PL----TDGDGW---I 65 (286)
T ss_dssp EEEEETT-TSHHHHHHHHHHHH---------SSSEEEEECCSHHHHHHHHH----TTC------CC----CCSSGG---G
T ss_pred EEEEECC-CCHHHHHHHHHHHh---------CCCEEEEEECCHHHHHHHHh----cCC------Cc----CCHHHH---h
Confidence 5666665 15565555555431 24589999999877666543 121 11 121111 1
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
...|+|+..-.-.. ....+.++...++++..++
T Consensus 66 ~~aDvVi~av~~~~---~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 66 DEADVVVLALPDNI---IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp GTCSEEEECSCHHH---HHHHHHHHGGGSCTTCEEE
T ss_pred cCCCEEEEcCCchH---HHHHHHHHHHhCCCCCEEE
Confidence 34799987543322 4566677777777776554
No 467
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=73.94 E-value=16 Score=24.06 Aligned_cols=75 Identities=7% Similarity=-0.110 Sum_probs=44.7
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH-HHHHHHHHHhh-hccCCCCCCCceeEEeccccc----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR-AMLDVGEQRAR-DLFKVPVPNPRLRFLEANAEE---- 76 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~---- 76 (131)
+|=.| |+|.+...+++.+-. .+.+|+.++.++ +..+...+.+. ..+ .++.++..|+.+
T Consensus 26 ~lVTG-as~gIG~aia~~L~~---------~G~~V~~~~r~~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~~ 89 (288)
T 2x9g_A 26 AVVTG-AAKRIGRAIAVKLHQ---------TGYRVVIHYHNSAEAAVSLADELNKERS------NTAVVCQADLTNSNVL 89 (288)
T ss_dssp EEETT-CSSHHHHHHHHHHHH---------HTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSCSTTH
T ss_pred EEEeC-CCCHHHHHHHHHHHH---------CCCeEEEEeCCchHHHHHHHHHHHhhcC------CceEEEEeecCCccCC
Confidence 34344 445556666555431 257899999887 66655555443 222 168888888876
Q ss_pred CC-----C-----CCCCeeEEEEcccc
Q psy890 77 LP-----I-----ESDSYSAYTIAFGI 93 (131)
Q Consensus 77 ~~-----~-----~~~~~D~i~~~~~l 93 (131)
.. + ..+.+|+++.+.+.
T Consensus 90 ~~~v~~~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 90 PASCEEIINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 21 0 01368999987664
No 468
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=73.59 E-value=16 Score=23.79 Aligned_cols=89 Identities=10% Similarity=0.077 Sum_probs=49.2
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCe-EEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPH-VTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI 79 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 79 (131)
|+|.-+|+ |.....++..+.. .+.+ ++++|.+++..+...+.. .+.. ..+..+.
T Consensus 11 m~i~iiG~--G~mG~~~a~~l~~---------~g~~~v~~~~~~~~~~~~~~~~~-----------g~~~-~~~~~~~-- 65 (266)
T 3d1l_A 11 TPIVLIGA--GNLATNLAKALYR---------KGFRIVQVYSRTEESARELAQKV-----------EAEY-TTDLAEV-- 65 (266)
T ss_dssp CCEEEECC--SHHHHHHHHHHHH---------HTCCEEEEECSSHHHHHHHHHHT-----------TCEE-ESCGGGS--
T ss_pred CeEEEEcC--CHHHHHHHHHHHH---------CCCeEEEEEeCCHHHHHHHHHHc-----------CCce-eCCHHHH--
Confidence 45666666 5565555554421 1334 899999987776655432 1221 1233222
Q ss_pred CCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEE
Q psy890 80 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 80 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~ 118 (131)
-...|+|+..-.-. .....+.++...++++..++-
T Consensus 66 -~~~~Dvvi~av~~~---~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 66 -NPYAKLYIVSLKDS---AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp -CSCCSEEEECCCHH---HHHHHHHHHHTTCCTTCEEEE
T ss_pred -hcCCCEEEEecCHH---HHHHHHHHHHhhcCCCcEEEE
Confidence 13479998754322 235566677777777766554
No 469
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=73.39 E-value=16 Score=23.73 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=41.3
Q ss_pred eeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+++ |.+...+++.+.. .+.+|+.++.++...+.. +.+.... . ...++..|+.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~---------~G~~V~~~~r~~~~~~~~-~~l~~~~-~-----~~~~~~~D~~~~~~v~ 75 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHR---------EGAELAFTYQNDKLKGRV-EEFAAQL-G-----SDIVLQCDVAEDASID 75 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHH---------TTCEEEEEESSTTTHHHH-HHHHHHT-T-----CCCEEECCTTCHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHH---------CCCEEEEEcCcHHHHHHH-HHHHHhc-C-----CcEEEEccCCCHHHHH
Confidence 55556542 5666666666531 257899998876211122 2222111 1 3466777766532
Q ss_pred -------CCCCCeeEEEEccccc
Q psy890 79 -------IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -------~~~~~~D~i~~~~~l~ 94 (131)
-.-+.+|+++.+.+..
T Consensus 76 ~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 76 TMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 1124689999877653
No 470
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=73.37 E-value=1.7 Score=30.49 Aligned_cols=38 Identities=16% Similarity=0.031 Sum_probs=21.2
Q ss_pred CeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 83 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 83 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+|+|+....+...+.+.-+..+..+.|+|||+++-+-
T Consensus 257 ~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 257 KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 57999865422111111111245667789999876543
No 471
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.25 E-value=19 Score=24.62 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=20.7
Q ss_pred CeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 83 SYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 83 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
.+|+|+-.-+- . ...+..+.|+++|+++.+
T Consensus 240 ~~Dvvid~~g~------~-~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 240 QPRLALNCVGG------K-SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp CCSEEEESSCH------H-HHHHHHTTSCTTCEEEEC
T ss_pred CceEEEECCCc------H-HHHHHHHhhCCCCEEEEE
Confidence 48999765431 1 124567899999998875
No 472
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=73.14 E-value=15 Score=24.91 Aligned_cols=88 Identities=7% Similarity=-0.092 Sum_probs=51.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH----HHHHHHHHHhhhccCCCCCCCceeEEecccccC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR----AMLDVGEQRARDLFKVPVPNPRLRFLEANAEEL 77 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 77 (131)
+||=.| ++|.+...+++.+.+ .+.++++++-++ ........ +.. . .+.++.+|+.+.
T Consensus 12 ~IlVtG-atG~iG~~l~~~L~~---------~g~~V~~l~R~~~~~~~~~~~~~~-l~~-~-------~v~~~~~Dl~d~ 72 (346)
T 3i6i_A 12 RVLIAG-ATGFIGQFVATASLD---------AHRPTYILARPGPRSPSKAKIFKA-LED-K-------GAIIVYGLINEQ 72 (346)
T ss_dssp CEEEEC-TTSHHHHHHHHHHHH---------TTCCEEEEECSSCCCHHHHHHHHH-HHH-T-------TCEEEECCTTCH
T ss_pred eEEEEC-CCcHHHHHHHHHHHH---------CCCCEEEEECCCCCChhHHHHHHH-HHh-C-------CcEEEEeecCCH
Confidence 455444 578888888777642 245788888755 33322211 211 1 688888998763
Q ss_pred C-----CCCCCeeEEEEccccccccCHHHHHHHHHH
Q psy890 78 P-----IESDSYSAYTIAFGIRNVTRIDKALSEAYR 108 (131)
Q Consensus 78 ~-----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~ 108 (131)
. +....+|+|+......+......++..+.+
T Consensus 73 ~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHH
Confidence 2 222268999988776655555555554443
No 473
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=72.99 E-value=10 Score=27.39 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=45.4
Q ss_pred cccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----CCCCC
Q psy890 8 VFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP----IESDS 83 (131)
Q Consensus 8 ~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 83 (131)
+|.|..+..+++.+. ...++..+|.+++-.+.+.+.++ +..++.+|..+.. ..-+.
T Consensus 241 ~GgG~ig~~lA~~L~----------~~~~v~iIE~d~~r~~~la~~l~----------~~~Vi~GD~td~~~L~ee~i~~ 300 (461)
T 4g65_A 241 VGGGNIGASLAKRLE----------QTYSVKLIERNLQRAEKLSEELE----------NTIVFCGDAADQELLTEENIDQ 300 (461)
T ss_dssp ECCSHHHHHHHHHHT----------TTSEEEEEESCHHHHHHHHHHCT----------TSEEEESCTTCHHHHHHTTGGG
T ss_pred EcchHHHHHHHHHhh----------hcCceEEEecCHHHHHHHHHHCC----------CceEEeccccchhhHhhcCchh
Confidence 567788888988876 35789999999987777766553 6778888877643 11245
Q ss_pred eeEEEEc
Q psy890 84 YSAYTIA 90 (131)
Q Consensus 84 ~D~i~~~ 90 (131)
+|++++.
T Consensus 301 ~D~~ia~ 307 (461)
T 4g65_A 301 VDVFIAL 307 (461)
T ss_dssp CSEEEEC
T ss_pred hcEEEEc
Confidence 7888763
No 474
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=72.95 E-value=15 Score=23.02 Aligned_cols=70 Identities=9% Similarity=0.033 Sum_probs=46.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccccc-CC-
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEE-LP- 78 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~- 78 (131)
|+||=.| |+|.+...+++.+.+ .+.+|++++.++.. .... .++.++.+|+.+ ..
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~---------~g~~V~~~~R~~~~-------~~~~-------~~~~~~~~D~~d~~~~ 56 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLST---------TDYQIYAGARKVEQ-------VPQY-------NNVKAVHFDVDWTPEE 56 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTT---------SSCEEEEEESSGGG-------SCCC-------TTEEEEECCTTSCHHH
T ss_pred CeEEEEC-CCCHHHHHHHHHHHH---------CCCEEEEEECCccc-------hhhc-------CCceEEEecccCCHHH
Confidence 6777555 567888888887752 35789999987632 1111 178999999877 31
Q ss_pred --CCCCCeeEEEEccccc
Q psy890 79 --IESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 --~~~~~~D~i~~~~~l~ 94 (131)
-.-+.+|+|+......
T Consensus 57 ~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 57 MAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp HHTTTTTCSEEEECCCCT
T ss_pred HHHHHcCCCEEEECCcCC
Confidence 1124689999876654
No 475
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=72.93 E-value=17 Score=23.74 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=47.1
Q ss_pred ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCC---------
Q psy890 9 FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPI--------- 79 (131)
Q Consensus 9 G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 79 (131)
|+|.+...+++.+-. .+.+|+.++.+++.++...+.+....- .++.++..|+.+...
T Consensus 28 as~gIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 28 ATKGIGADIARAFAA---------AGARLVLSGRDVSELDAARRALGEQFG-----TDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHHHH
Confidence 445566666665531 367899999999888777666654211 178889999876531
Q ss_pred -CCCCeeEEEEccccc
Q psy890 80 -ESDSYSAYTIAFGIR 94 (131)
Q Consensus 80 -~~~~~D~i~~~~~l~ 94 (131)
..+..|+++.+.+..
T Consensus 94 ~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 94 EAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHTSCSEEEEECCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 013689999876653
No 476
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=72.55 E-value=17 Score=23.67 Aligned_cols=102 Identities=7% Similarity=-0.004 Sum_probs=58.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC---HHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN---RAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 78 (131)
+|=.| |+|.+...+++.+-. .+.+++.++.+ .+..+...+.+...+ .++.++..|+.+..
T Consensus 14 vlVTG-as~GIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 14 IVIAG-GIKNLGALTAKTFAL---------ESVNLVLHYHQAKDSDTANKLKDELEDQG------AKVALYQSDLSNEEE 77 (262)
T ss_dssp EEEET-CSSHHHHHHHHHHTT---------SSCEEEEEESCGGGHHHHHHHHHHHHTTT------CEEEEEECCCCSHHH
T ss_pred EEEEC-CCchHHHHHHHHHHH---------CCCEEEEEecCccCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHH
Confidence 34344 445567777776642 36788887654 334444444444332 27888888977642
Q ss_pred ----C-----CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEe
Q psy890 79 ----I-----ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 79 ----~-----~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
+ ..+..|+++.+.+..... + .....+.+.+.|+++|.++++.
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 1 114789999877643221 1 1233455556667778887754
No 477
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=72.48 E-value=20 Score=24.35 Aligned_cols=73 Identities=8% Similarity=-0.003 Sum_probs=37.1
Q ss_pred CCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCCCCCeeEEEEccccc------------cccCHHH
Q psy890 34 APHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIESDSYSAYTIAFGIR------------NVTRIDK 101 (131)
Q Consensus 34 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~------------~~~~~~~ 101 (131)
..++..+|++++....+.+.... .. ++++.. .|...+ ...|+|+...... +.+-...
T Consensus 39 ~~ev~L~Di~~~~~g~a~dl~~~-~~-----~~i~~t-~d~~~l----~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~ 107 (303)
T 2i6t_A 39 ADRLVLLDLSEGTKGATMDLEIF-NL-----PNVEIS-KDLSAS----AHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRA 107 (303)
T ss_dssp CSEEEEECCC-----CHHHHHHH-TC-----TTEEEE-SCGGGG----TTCSEEEECCCC----CCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCcchHHHHHHHhhh-cC-----CCeEEe-CCHHHH----CCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHH
Confidence 34899999998633333333321 11 145442 444322 3479999876432 2222345
Q ss_pred HHHHHHHhccCCcEEEE
Q psy890 102 ALSEAYRVLKPGGRFLC 118 (131)
Q Consensus 102 ~l~~~~~~L~p~G~l~~ 118 (131)
...++.+.. |++++++
T Consensus 108 i~~~i~~~~-p~a~iiv 123 (303)
T 2i6t_A 108 LVPALGHYS-QHSVLLV 123 (303)
T ss_dssp HHHHHHHHT-TTCEEEE
T ss_pred HHHHHHHhC-CCeEEEE
Confidence 555565554 9999866
No 478
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=72.31 E-value=18 Score=23.86 Aligned_cols=73 Identities=11% Similarity=0.057 Sum_probs=45.9
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.+|.+++..+...+.+ + .++.++..|+.+..
T Consensus 32 vlVTGa-s~gIG~aia~~la~---------~G~~V~~~~r~~~~~~~~~~~~---~------~~~~~~~~Dv~d~~~v~~ 92 (277)
T 3gvc_A 32 AIVTGA-GAGIGLAVARRLAD---------EGCHVLCADIDGDAADAAATKI---G------CGAAACRVDVSDEQQIIA 92 (277)
T ss_dssp EEETTT-TSTHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHHHH---C------SSCEEEECCTTCHHHHHH
T ss_pred EEEECC-CcHHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHc---C------CcceEEEecCCCHHHHHH
Confidence 343444 44555666555431 3678999999987776665554 1 16788888877642
Q ss_pred -C-----CCCCeeEEEEccccc
Q psy890 79 -I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l~ 94 (131)
+ .-+..|+++.+.+..
T Consensus 93 ~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 93 MVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 1 113689999877653
No 479
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.06 E-value=15 Score=22.94 Aligned_cols=93 Identities=12% Similarity=0.053 Sum_probs=52.3
Q ss_pred eeeeecccchhhHHHhhhhc-CCCCCCCCCCCCCeEEEEeCCHH-HHHHHHHHhhhccCCCCCCCceeEEecccccCC-C
Q psy890 3 ILFYLVFPGDIAFRFLNYVD-KLPPNTLSEHCAPHVTVADINRA-MLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-I 79 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 79 (131)
||=.| ++|.+...+++.+. . .+.+|++++.+++ .++... ... .++.++..|+.+.. +
T Consensus 8 vlVtG-asg~iG~~~~~~l~~~---------~g~~V~~~~r~~~~~~~~~~---~~~-------~~~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 8 ITILG-AAGQIAQXLTATLLTY---------TDMHITLYGRQLKTRIPPEI---IDH-------ERVTVIEGSFQNPGXL 67 (221)
T ss_dssp EEEES-TTSHHHHHHHHHHHHH---------CCCEEEEEESSHHHHSCHHH---HTS-------TTEEEEECCTTCHHHH
T ss_pred EEEEe-CCcHHHHHHHHHHHhc---------CCceEEEEecCccccchhhc---cCC-------CceEEEECCCCCHHHH
Confidence 45444 56667666666543 1 2678999998875 332221 111 27888888887532 1
Q ss_pred --CCCCeeEEEEccccccccCHHHHHHHHHHhccC--CcEEEEEe
Q psy890 80 --ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKP--GGRFLCLE 120 (131)
Q Consensus 80 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p--~G~l~~~~ 120 (131)
.-+.+|+|+.+.+..++. ...+.+.++. .|+++++.
T Consensus 68 ~~~~~~~d~vv~~ag~~n~~-----~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 68 EQAVTNAEVVFVGAMESGSD-----MASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp HHHHTTCSEEEESCCCCHHH-----HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHcCCCEEEEcCCCCChh-----HHHHHHHHHhcCCCeEEEEe
Confidence 013579999877654333 3333444332 25666543
No 480
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=71.96 E-value=19 Score=23.82 Aligned_cols=41 Identities=10% Similarity=-0.072 Sum_probs=24.1
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHH
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGE 51 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~ 51 (131)
+|.-||+ |.....++..+.... .+.+++++|.+++..+.+.
T Consensus 8 ~I~iIG~--G~mG~~~a~~l~~~g-------~~~~V~~~d~~~~~~~~~~ 48 (290)
T 3b1f_A 8 TIYIAGL--GLIGASLALGIKRDH-------PHYKIVGYNRSDRSRDIAL 48 (290)
T ss_dssp EEEEECC--SHHHHHHHHHHHHHC-------TTSEEEEECSSHHHHHHHH
T ss_pred eEEEEee--CHHHHHHHHHHHhCC-------CCcEEEEEcCCHHHHHHHH
Confidence 4555654 556555555442100 1357999999987776654
No 481
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.87 E-value=17 Score=23.28 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=45.2
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
||=.|+ +|.+...+++.+.. .+.+|+.++.+++.++...+.+.. ++.+...|+.+..
T Consensus 17 vlVTGa-s~gIG~~~a~~l~~---------~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~~~~ 77 (249)
T 3f9i_A 17 SLITGA-SSGIGSAIARLLHK---------LGSKVIISGSNEEKLKSLGNALKD---------NYTIEVCNLANKEECSN 77 (249)
T ss_dssp EEETTT-TSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHCS---------SEEEEECCTTSHHHHHH
T ss_pred EEEECC-CChHHHHHHHHHHH---------CCCEEEEEcCCHHHHHHHHHHhcc---------CccEEEcCCCCHHHHHH
Confidence 444444 45566666665531 267899999998877766555432 6777778866532
Q ss_pred -C-CCCCeeEEEEccccc
Q psy890 79 -I-ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~-~~~~~D~i~~~~~l~ 94 (131)
+ .....|+++.+.+..
T Consensus 78 ~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 78 LISKTSNLDILVCNAGIT 95 (249)
T ss_dssp HHHTCSCCSEEEECCC--
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 1 124689999876643
No 482
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=71.68 E-value=8.2 Score=28.41 Aligned_cols=63 Identities=6% Similarity=-0.008 Sum_probs=42.7
Q ss_pred ecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----CCCC
Q psy890 7 LVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP----IESD 82 (131)
Q Consensus 7 g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 82 (131)
=||.|..+..+++.+.+ .+..++.+|.+++.++.+++.. .+.++.+|..+.. ..-+
T Consensus 132 I~G~g~~g~~la~~L~~---------~~~~vvvid~~~~~~~~~~~~~-----------~~~~i~Gd~~~~~~L~~a~i~ 191 (565)
T 4gx0_A 132 IFGIDPITRTLIRKLES---------RNHLFVVVTDNYDQALHLEEQE-----------GFKVVYGSPTDAHVLAGLRVA 191 (565)
T ss_dssp EESCCHHHHHHHHHTTT---------TTCCEEEEESCHHHHHHHHHSC-----------SSEEEESCTTCHHHHHHTTGG
T ss_pred EECCChHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHHhc-----------CCeEEEeCCCCHHHHHhcCcc
Confidence 36778899989888752 2567999999998877765431 3567777765532 1224
Q ss_pred CeeEEEE
Q psy890 83 SYSAYTI 89 (131)
Q Consensus 83 ~~D~i~~ 89 (131)
.+|.+++
T Consensus 192 ~a~~vi~ 198 (565)
T 4gx0_A 192 AARSIIA 198 (565)
T ss_dssp GCSEEEE
T ss_pred cCCEEEE
Confidence 5777776
No 483
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=71.58 E-value=18 Score=23.64 Aligned_cols=88 Identities=13% Similarity=-0.003 Sum_probs=50.4
Q ss_pred CceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCCCC
Q psy890 1 MYILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELPIE 80 (131)
Q Consensus 1 ~~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 80 (131)
|+|.-+|+ |.+...++..+.. .+.+++++|.+++..+.+.+ .+.. ... ..+..+.
T Consensus 1 m~i~iiG~--G~~G~~~a~~l~~---------~g~~V~~~~~~~~~~~~~~~----~g~~------~~~-~~~~~~~--- 55 (279)
T 2f1k_A 1 MKIGVVGL--GLIGASLAGDLRR---------RGHYLIGVSRQQSTCEKAVE----RQLV------DEA-GQDLSLL--- 55 (279)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHHH----TTSC------SEE-ESCGGGG---
T ss_pred CEEEEEcC--cHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHh----CCCC------ccc-cCCHHHh---
Confidence 56777776 4565555555431 14589999999877666532 1211 111 2232222
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEE
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFL 117 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~ 117 (131)
...|+|+..-.-. .....+.++...++++..++
T Consensus 56 -~~~D~vi~av~~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 56 -QTAKIIFLCTPIQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -TTCSEEEECSCHH---HHHHHHHHHGGGSCTTCEEE
T ss_pred -CCCCEEEEECCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 3579888754322 33556677777888877654
No 484
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=71.40 E-value=24 Score=24.98 Aligned_cols=92 Identities=11% Similarity=-0.033 Sum_probs=52.8
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEeccc-----
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANA----- 74 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----- 74 (131)
+||-.|+ |-|..+..+++.. +.++++++.+++-++.+++ .+... -+.....+.
T Consensus 223 ~VlV~GasG~iG~~a~qla~~~------------Ga~vi~~~~~~~~~~~~~~----lGa~~----~i~~~~~~~~~~~~ 282 (447)
T 4a0s_A 223 IVLIWGASGGLGSYAIQFVKNG------------GGIPVAVVSSAQKEAAVRA----LGCDL----VINRAELGITDDIA 282 (447)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT------------TCEEEEEESSHHHHHHHHH----TTCCC----EEEHHHHTCCTTGG
T ss_pred EEEEECCCCHHHHHHHHHHHHc------------CCEEEEEeCCHHHHHHHHh----cCCCE----EEeccccccccccc
Confidence 3555564 3456666666653 5689999988887777643 12110 111111111
Q ss_pred --------------ccC-CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 75 --------------EEL-PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 75 --------------~~~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
... ......+|+|+...+- ..+....+.|+++|.++.+-
T Consensus 283 ~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred ccccccchhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 000 0113468999876542 35677888999999998753
No 485
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=70.84 E-value=18 Score=24.25 Aligned_cols=40 Identities=10% Similarity=-0.078 Sum_probs=26.0
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHH
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~ 52 (131)
+|.-||+ |.....++..+.. .+.+|+++|.+++..+.+.+
T Consensus 9 ~I~iIG~--G~mG~~~a~~l~~---------~G~~V~~~dr~~~~~~~~~~ 48 (303)
T 3g0o_A 9 HVGIVGL--GSMGMGAARSCLR---------AGLSTWGADLNPQACANLLA 48 (303)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEECSCHHHHHHHHH
T ss_pred eEEEECC--CHHHHHHHHHHHH---------CCCeEEEEECCHHHHHHHHH
Confidence 4555654 5566666665431 25689999999987776553
No 486
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=70.79 E-value=19 Score=23.59 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=59.8
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCC-HHHHHHHHHHhhhccCCCCCCCceeEEecccccCC---
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADIN-RAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+++.++.. .+..+...+.+...+ .++.++..|+.+..
T Consensus 34 ~lVTGa-s~GIG~aia~~la~---------~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~ 97 (271)
T 3v2g_A 34 AFVTGG-SRGIGAAIAKRLAL---------EGAAVALTYVNAAERAQAVVSEIEQAG------GRAVAIRADNRDAEAIE 97 (271)
T ss_dssp EEEETT-TSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHH
T ss_pred EEEeCC-CcHHHHHHHHHHHH---------CCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHH
Confidence 344444 44566666665531 36788888654 455555555554433 26888888877642
Q ss_pred --C-----CCCCeeEEEEcccccccc--------C-----------HHHHHHHHHHhccCCcEEEEEec
Q psy890 79 --I-----ESDSYSAYTIAFGIRNVT--------R-----------IDKALSEAYRVLKPGGRFLCLEF 121 (131)
Q Consensus 79 --~-----~~~~~D~i~~~~~l~~~~--------~-----------~~~~l~~~~~~L~p~G~l~~~~~ 121 (131)
+ ..+..|+++.+.+..... + ....++.+.+.|+++|.++.+..
T Consensus 98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 1 113689999876653211 1 12345666777888888877643
No 487
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=70.63 E-value=4 Score=28.32 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=47.4
Q ss_pred ceeeeec--ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEec--ccccC
Q psy890 2 YILFYLV--FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEA--NAEEL 77 (131)
Q Consensus 2 ~iLdig~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~ 77 (131)
+||-.|+ |.|..+..+++.. +.++++++ +++-.+.+++ .+. ...+-.. +..+.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~------------Ga~Vi~~~-~~~~~~~~~~----lGa------~~v~~~~~~~~~~~ 242 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAW------------DAHVTAVC-SQDASELVRK----LGA------DDVIDYKSGSVEEQ 242 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------------TCEEEEEE-CGGGHHHHHH----TTC------SEEEETTSSCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhC------------CCEEEEEe-ChHHHHHHHH----cCC------CEEEECCchHHHHH
Confidence 3555652 4556666666653 45888888 6655554432 221 1111111 11000
Q ss_pred CCCCCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 78 PIESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 78 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
-.....+|+|+...+- ....+....+.++++|+++.+
T Consensus 243 ~~~~~g~D~vid~~g~-----~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 243 LKSLKPFDFILDNVGG-----STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp HHTSCCBSEEEESSCT-----THHHHGGGGBCSSSCCEEEES
T ss_pred HhhcCCCCEEEECCCC-----hhhhhHHHHHhhcCCcEEEEe
Confidence 0112468999875432 123456677889999998764
No 488
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=70.39 E-value=21 Score=23.73 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=38.6
Q ss_pred CeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC--------C--CCCCeeEEEEccccc
Q psy890 35 PHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP--------I--ESDSYSAYTIAFGIR 94 (131)
Q Consensus 35 ~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------~--~~~~~D~i~~~~~l~ 94 (131)
.+++.++.+.+.++...+.+...... .++.++..|+.+.. . .-+..|+++.+.+..
T Consensus 61 ~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 61 MKLILAARRLEKLEELKKTIDQEFPN----AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA 126 (287)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHCTT----CEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHhhCCC----CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 38999999998888777766543211 16888888877642 1 114689999887653
No 489
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=70.37 E-value=20 Score=23.57 Aligned_cols=75 Identities=8% Similarity=-0.016 Sum_probs=42.6
Q ss_pred eeeeeccc-chhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhh-ccCCCCCCCceeEEecccccCC--
Q psy890 3 ILFYLVFP-GDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARD-LFKVPVPNPRLRFLEANAEELP-- 78 (131)
Q Consensus 3 iLdig~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~-- 78 (131)
+|=.|+++ |.+...+++.+.. .+.+|+.++.++. .+...+.+.. .+ .+.++..|+.+..
T Consensus 24 vlVTGas~~~gIG~~ia~~l~~---------~G~~V~~~~r~~~-~~~~~~~l~~~~~-------~~~~~~~Dl~~~~~v 86 (285)
T 2p91_A 24 ALITGVANERSIAYGIAKSFHR---------EGAQLAFTYATPK-LEKRVREIAKGFG-------SDLVVKCDVSLDEDI 86 (285)
T ss_dssp EEECCCSSTTSHHHHHHHHHHH---------TTCEEEEEESSGG-GHHHHHHHHHHTT-------CCCEEECCTTCHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHH---------cCCEEEEEeCCHH-HHHHHHHHHHhcC-------CeEEEEcCCCCHHHH
Confidence 55556542 5666666666531 2578999998875 2222222222 12 4567778876532
Q ss_pred ---C-----CCCCeeEEEEccccc
Q psy890 79 ---I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 ---~-----~~~~~D~i~~~~~l~ 94 (131)
+ .-+.+|+++.+.+..
T Consensus 87 ~~~~~~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 87 KNLKKFLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 124689999877653
No 490
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=69.97 E-value=4.3 Score=27.76 Aligned_cols=36 Identities=11% Similarity=0.024 Sum_probs=26.8
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCH
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINR 44 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~ 44 (131)
.|+-+|||.|.....+.+..++.. ...+++++|+.+
T Consensus 63 ~VVYVGSApG~HL~~L~~~fp~~f-------~~ikWvLiDPap 98 (307)
T 3mag_A 63 TVVYIGSAPGTHIRYLRDHFYNLG-------VIIKWMLIDGRH 98 (307)
T ss_dssp EEEEESCCSCHHHHHHHHHHHHTT-------CCCEEEEEESSC
T ss_pred EEEEecccCccHHHHHHHhchhhC-------CCeEEEEEcCCc
Confidence 578899999999888888765221 246888899855
No 491
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=69.61 E-value=21 Score=23.40 Aligned_cols=76 Identities=7% Similarity=0.010 Sum_probs=46.3
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-------------CHHHHHHHHHHhhhccCCCCCCCceeE
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-------------NRAMLDVGEQRARDLFKVPVPNPRLRF 69 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-------------s~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (131)
+|=.|+ +|.+...+++.+-. .+.+++.+|. +.+.++...+.....+ .++.+
T Consensus 14 ~lVTGa-s~GIG~a~a~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 77 (277)
T 3tsc_A 14 AFITGA-ARGQGRAHAVRMAA---------EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN------RRIVA 77 (277)
T ss_dssp EEEEST-TSHHHHHHHHHHHH---------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEE
T ss_pred EEEECC-ccHHHHHHHHHHHH---------cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC------CeEEE
Confidence 344444 44455556555431 3678999987 5666666555554433 26888
Q ss_pred EecccccCC-----CC-----CCCeeEEEEccccc
Q psy890 70 LEANAEELP-----IE-----SDSYSAYTIAFGIR 94 (131)
Q Consensus 70 ~~~d~~~~~-----~~-----~~~~D~i~~~~~l~ 94 (131)
+..|+.+.. +. -+..|+++.+.+..
T Consensus 78 ~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 78 AVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 888877642 11 14689999877654
No 492
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=69.37 E-value=20 Score=23.27 Aligned_cols=78 Identities=13% Similarity=0.028 Sum_probs=49.0
Q ss_pred eeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC----
Q psy890 3 ILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP---- 78 (131)
Q Consensus 3 iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 78 (131)
+|=.|+ +|.+...+++.+-. .+.+|+.++.+++..+...+.+...... .++.++..|+.+..
T Consensus 11 ~lVTGa-s~GIG~aia~~l~~---------~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~~~~v~~ 76 (265)
T 3lf2_A 11 AVVTGG-SSGIGLATVELLLE---------AGAAVAFCARDGERLRAAESALRQRFPG----ARLFASVCDVLDALQVRA 76 (265)
T ss_dssp EEEETC-SSHHHHHHHHHHHH---------TTCEEEEEESCHHHHHHHHHHHHHHSTT----CCEEEEECCTTCHHHHHH
T ss_pred EEEeCC-CChHHHHHHHHHHH---------CCCEEEEEeCCHHHHHHHHHHHHHhcCC----ceEEEEeCCCCCHHHHHH
Confidence 343444 44566666665531 3678999999998887777666542111 15888888877642
Q ss_pred -C-----CCCCeeEEEEccccc
Q psy890 79 -I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 79 -~-----~~~~~D~i~~~~~l~ 94 (131)
+ ..+..|+++.+.+..
T Consensus 77 ~~~~~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 77 FAEACERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHHHHHCSCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 1 114689999877653
No 493
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=69.17 E-value=5.1 Score=30.09 Aligned_cols=43 Identities=19% Similarity=0.366 Sum_probs=29.7
Q ss_pred CCCeeEEEEccc----ccccc-------CHHHHHHHHHHhccCCcEEEEEeccC
Q psy890 81 SDSYSAYTIAFG----IRNVT-------RIDKALSEAYRVLKPGGRFLCLEFSH 123 (131)
Q Consensus 81 ~~~~D~i~~~~~----l~~~~-------~~~~~l~~~~~~L~p~G~l~~~~~~~ 123 (131)
...||+|+++-. .||.. .+...-....++|+|||.+++.-++.
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGy 272 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGY 272 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeec
Confidence 358999998532 34442 23344566778999999999877664
No 494
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.47 E-value=22 Score=23.30 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=46.6
Q ss_pred eeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-------------CHHHHHHHHHHhhhccCCCCCCCceeEE
Q psy890 4 LFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-------------NRAMLDVGEQRARDLFKVPVPNPRLRFL 70 (131)
Q Consensus 4 Ldig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-------------s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (131)
|=.| |+|.+...+++.+-. .+.+|+.+|. +++.++...+.+...+ .++.++
T Consensus 19 lVTG-as~gIG~a~a~~la~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 82 (280)
T 3pgx_A 19 FITG-AARGQGRSHAVRLAA---------EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG------RKALTR 82 (280)
T ss_dssp EEES-TTSHHHHHHHHHHHH---------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT------CCEEEE
T ss_pred EEEC-CCcHHHHHHHHHHHH---------CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC------CeEEEE
Confidence 3344 445566666665531 3678999987 6666666666555433 268888
Q ss_pred ecccccCC-----C-----CCCCeeEEEEccccc
Q psy890 71 EANAEELP-----I-----ESDSYSAYTIAFGIR 94 (131)
Q Consensus 71 ~~d~~~~~-----~-----~~~~~D~i~~~~~l~ 94 (131)
..|+.+.. + ..+..|+++.+.+..
T Consensus 83 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 83 VLDVRDDAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 88877642 1 114689999876653
No 495
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=67.16 E-value=1.8 Score=30.68 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=13.9
Q ss_pred CCeEEEEeCCHHHHHHHH
Q psy890 34 APHVTVADINRAMLDVGE 51 (131)
Q Consensus 34 ~~~~~~~D~s~~~~~~~~ 51 (131)
+.+|+++|.++...+.++
T Consensus 195 Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 195 GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp TCEEEEECSCGGGHHHHH
T ss_pred CCEEEEEcCCHHHHHHHH
Confidence 468999999987666653
No 496
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=66.60 E-value=23 Score=22.73 Aligned_cols=73 Identities=12% Similarity=-0.007 Sum_probs=44.3
Q ss_pred ecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeC-CHHHHHHHHHHhhhccCCCCCCCceeEEecccccCC-----CC
Q psy890 7 LVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADI-NRAMLDVGEQRARDLFKVPVPNPRLRFLEANAEELP-----IE 80 (131)
Q Consensus 7 g~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 80 (131)
-.|+|.+...+++.+-. .+.+++.++. +++..+...+.+...+ .++.++..|+.+.. +.
T Consensus 10 TGas~gIG~~ia~~l~~---------~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 74 (246)
T 3osu_A 10 TGASRGIGRSIALQLAE---------EGYNVAVNYAGSKEKAEAVVEEIKAKG------VDSFAIQANVADADEVKAMIK 74 (246)
T ss_dssp TTCSSHHHHHHHHHHHH---------TTCEEEEEESSCHHHHHHHHHHHHHTT------SCEEEEECCTTCHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHH---------CCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHH
Confidence 33455566666665531 3678888876 5555665555555433 26788888877642 10
Q ss_pred -----CCCeeEEEEccccc
Q psy890 81 -----SDSYSAYTIAFGIR 94 (131)
Q Consensus 81 -----~~~~D~i~~~~~l~ 94 (131)
.+..|+++.+.+..
T Consensus 75 ~~~~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 75 EVVSQFGSLDVLVNNAGIT 93 (246)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 13689999877653
No 497
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=65.83 E-value=34 Score=24.56 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=24.8
Q ss_pred ccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHH
Q psy890 9 FPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQ 52 (131)
Q Consensus 9 G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~ 52 (131)
|.|.+...++..+. .+.+|+++|.+++.++..++
T Consensus 43 GlG~mG~~lA~~La----------~G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 43 GTGYVGLSNGVLIA----------QNHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp CCSHHHHHHHHHHH----------TTSEEEEECSCHHHHHHHHT
T ss_pred CcCHHHHHHHHHHH----------cCCeEEEEecCHHHhhHHhc
Confidence 55667666666554 24689999999988887765
No 498
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=65.71 E-value=3.4 Score=28.38 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=20.4
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
.+.+|+|+-.-+-. .+....+.|+++|+++++-
T Consensus 206 ~~g~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCGD-------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred CCCceEEEECCCch-------hHHHHHHHhhcCCEEEEEC
Confidence 35799998754311 2356788999999998764
No 499
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=65.39 E-value=25 Score=24.03 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=22.1
Q ss_pred CCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEEe
Q psy890 82 DSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLE 120 (131)
Q Consensus 82 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~~ 120 (131)
..+|+|+-.-+- ... .+..+.|+++|+++.+-
T Consensus 244 ~g~Dvvid~~G~------~~~-~~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 244 GEAKLALNCVGG------KSS-TGIARKLNNNGLMLTYG 275 (364)
T ss_dssp CCEEEEEESSCH------HHH-HHHHHTSCTTCEEEECC
T ss_pred CCceEEEECCCc------hhH-HHHHHHhccCCEEEEec
Confidence 469999875431 122 36679999999988753
No 500
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=65.25 E-value=14 Score=24.75 Aligned_cols=86 Identities=12% Similarity=0.044 Sum_probs=47.5
Q ss_pred ceeeeecccchhhHHHhhhhcCCCCCCCCCCCCCeEEEEeCCHHHHHHHHHHhhhccCCCCCCCceeEE-ecccccCCCC
Q psy890 2 YILFYLVFPGDIAFRFLNYVDKLPPNTLSEHCAPHVTVADINRAMLDVGEQRARDLFKVPVPNPRLRFL-EANAEELPIE 80 (131)
Q Consensus 2 ~iLdig~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~ 80 (131)
+++-+|+ |.....+++.+.. .+.+++++|.+++..+.+.+ .+ .... ..++.+.
T Consensus 159 ~v~IiG~--G~iG~~~a~~l~~---------~G~~V~~~d~~~~~~~~~~~----~g--------~~~~~~~~l~~~--- 212 (300)
T 2rir_A 159 QVAVLGL--GRTGMTIARTFAA---------LGANVKVGARSSAHLARITE----MG--------LVPFHTDELKEH--- 212 (300)
T ss_dssp EEEEECC--SHHHHHHHHHHHH---------TTCEEEEEESSHHHHHHHHH----TT--------CEEEEGGGHHHH---
T ss_pred EEEEEcc--cHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHH----CC--------CeEEchhhHHHH---
Confidence 4555665 5566666665431 25689999998864443321 11 2221 1222221
Q ss_pred CCCeeEEEEccccccccCHHHHHHHHHHhccCCcEEEEE
Q psy890 81 SDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCL 119 (131)
Q Consensus 81 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~p~G~l~~~ 119 (131)
-...|+|+..-..+.+. ....+.|+|+++++=+
T Consensus 213 l~~aDvVi~~~p~~~i~------~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 213 VKDIDICINTIPSMILN------QTVLSSMTPKTLILDL 245 (300)
T ss_dssp STTCSEEEECCSSCCBC------HHHHTTSCTTCEEEEC
T ss_pred hhCCCEEEECCChhhhC------HHHHHhCCCCCEEEEE
Confidence 13579999876654332 1245678998877543
Done!