BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8908
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VTE0|BL1S2_DROME Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Drosophila melanogaster GN=blos2 PE=1 SV=2
Length = 159
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 18 TSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMK 77
+S SSFE + HDP L+ LAT MF KT +Y+ EL++ DY++LE+MN ATI KY DM+
Sbjct: 30 SSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMR 89
Query: 78 QITVNISFSSARVP-AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
QI N++ S++ + ++QL P ++QID+I D+V KLE AAYKLD Y+ LE + K
Sbjct: 90 QIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 145
>sp|Q66KB9|BL1S2_XENTR Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Xenopus tropicalis GN=bloc1s2 PE=2 SV=1
Length = 147
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 4/134 (2%)
Query: 5 VENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEK 64
V S S ++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE
Sbjct: 17 VAPSASQDDATVETAEEAVEP---PEADINELCRDMFSKMALYLTGELTTTSEDYKLLEN 73
Query: 65 MNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHY 123
MN T KY +MK I NIS + + Y L P LEQI+QI + V LE AAYKLD Y
Sbjct: 74 MNKLTSLKYMEMKDIAGNISRNLKDLNKKYASLQPYLEQINQIEEQVASLENAAYKLDAY 133
Query: 124 AKRLEAKFKQLEKQ 137
+KRLEAKFK+LEK+
Sbjct: 134 SKRLEAKFKKLEKR 147
>sp|Q9CWG9|BL1S2_MOUSE Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Mus musculus GN=Bloc1s2 PE=1 SV=1
Length = 143
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
+NEL +MF K A YL GEL++T DY++LE MN T KY +MK I +NIS + +
Sbjct: 38 INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 97
Query: 92 AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
Y +L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 98 KYAELQPYLDQINMIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 143
>sp|Q32WR5|BL1S2_RAT Biogenesis of lysosome-related organelles complex-1 subunit 2
OS=Rattus norvegicus GN=Bloc1s2 PE=2 SV=1
Length = 142
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
+NEL +MF K A YL GEL++T DY++LE MN T KY +MK I +NIS + +
Sbjct: 37 INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 92 AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|Q4R7C8|BL1S2_MACFA Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Macaca fascicularis GN=BLOC1S2 PE=2 SV=1
Length = 142
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
+ EL +MF K A YL GEL++T DY++LE MN T KY +MK I +NIS + +
Sbjct: 37 ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 92 AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|Q6QNY1|BL1S2_HUMAN Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Homo sapiens GN=BLOC1S2 PE=1 SV=1
Length = 142
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
+ EL +MF K A YL GEL++T DY++LE MN T KY +MK I +NIS + +
Sbjct: 37 ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 92 AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|A7RZS0|BL1S2_NEMVE Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Nematostella vectensis GN=bloc1s2 PE=3 SV=1
Length = 171
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVP- 91
L E F K YL GEL+++ DY +LE++NN T KY +M +T ++ + ++
Sbjct: 66 LKETCRVAFDKITQYLNGELTASLEDYTLLEQLNNLTTDKYKEMSTMTKSLITTMEKLDD 125
Query: 92 AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
YK L P LEQID+I DSV LEQAAY+LD Y+K+LE KFK+LE++
Sbjct: 126 KYKSLQPYLEQIDRIEDSVSSLEQAAYRLDAYSKKLENKFKRLERR 171
>sp|Q54Y67|BL1S2_DICDI Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Dictyostelium discoideum GN=bloc1s2 PE=3 SV=2
Length = 234
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 40 MFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNIS-FSSARVPAYKQLIP 98
MF K + Y+ EL++T +DY +L +MNN T +KY DM +T +S F Y++ P
Sbjct: 85 MFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVFMGDLKIKYEEFQP 144
Query: 99 QLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK 136
++I+++ +V LE+ LD Y KRLE K K ++K
Sbjct: 145 YFDKINELDKNVTDLEKTVQLLDEYTKRLEQKVKNIDK 182
>sp|Q95XD3|BL1S2_CAEEL Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Caenorhabditis elegans GN=blos-2 PE=1 SV=1
Length = 132
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 17 STSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDM 76
STS+ + P + +LA NM K + +L + +Y++LE MNN T +Y DM
Sbjct: 9 STSSPPVPSTPAPVPHIRQLADNMTDKVGQFFQHQLEGSIEEYKLLETMNNTTAQRYVDM 68
Query: 77 KQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE 135
K + ++ + Y+ L P L QID + +S +LE+A L++Y +LE+K ++
Sbjct: 69 KVVAEKVAGKLDNLNQKYENLRPYLSQIDAMDESTRRLEEATAVLENYVTQLESKLTNIQ 128
Query: 136 KQ 137
+Q
Sbjct: 129 QQ 130
>sp|F4K657|BL1S2_ARATH Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Arabidopsis thaliana GN=BLOS2 PE=1 SV=1
Length = 127
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPA 92
L E N+F + + EL T ++LEKMN ++Y DM + + + ++ +
Sbjct: 8 LAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAEQMKS 67
Query: 93 YKQLIPQ-LEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
+ + + Q+D I V + E LD Y LE+K +
Sbjct: 68 KSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKIR 108
>sp|P23623|OXLA_NEUCR L-amino-acid oxidase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=lox
PE=1 SV=2
Length = 696
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 10 SNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQAD 58
+N SLS +F P D E+A NMFK AD+L G L+ D
Sbjct: 322 NNSTKSLSQKVDAFLP--DTDKFFAEMAQNMFKAHADWLSGGLAGLPGD 368
>sp|Q9DC71|RT15_MOUSE 28S ribosomal protein S15, mitochondrial OS=Mus musculus GN=Mrps15
PE=2 SV=2
Length = 258
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 86 SSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYK 119
SSA + YK +IP +E++D + +L LE A+ K
Sbjct: 69 SSAFIKEYKDIIPNIEKVDDVVKRILSLEMASRK 102
>sp|P12804|FGL2_MOUSE Fibroleukin OS=Mus musculus GN=Fgl2 PE=1 SV=1
Length = 432
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 4 NVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATN-----MFKKTAD-YLIGELSSTQA 57
N+EN + NK+ +L+ +S + S P + + ++K +D Y++G SS
Sbjct: 161 NIENYVDNKVANLTVVVNSLDGKCSKCPSQEHMQSQPVQHLIYKDCSDHYVLGRRSS--G 218
Query: 58 DYEVLEKMNNATITKYSDMKQITVNISFSSARV 90
Y V N++ Y DM+ + + AR+
Sbjct: 219 AYRVTPDHRNSSFEVYCDMETMGGGWTVLQARL 251
>sp|Q5XI37|RT15_RAT 28S ribosomal protein S15, mitochondrial OS=Rattus norvegicus
GN=Mrps15 PE=2 SV=1
Length = 257
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 86 SSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYK 119
SS + YK +IP +E++D + +L LE A+ K
Sbjct: 68 SSTFIKEYKNIIPNMEKVDDVVKRILSLEMASRK 101
>sp|Q754H0|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70
PE=3 SV=1
Length = 614
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYL--IGELSSTQAD 58
+T + SLS ++ S S+ F P+I + RLN L N+ + + D + I +L+S +
Sbjct: 24 LTREITGSLSKITSTTSKSSKLFAPIIETNTRLNVLKRNI-ESSFDSVSSIKDLASDASK 82
Query: 59 YEVL 62
YE++
Sbjct: 83 YEII 86
>sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2
SV=2
Length = 996
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 62 LEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQL-------EQIDQIYDSVLKLE 114
LEK N A ++ + N+ + A + +QLI +L E + + ++ LK
Sbjct: 752 LEKENIAV-----ELSRCLQNLESTKAWLEEKEQLISKLKSQLTSSEDLQSLAETQLKCV 806
Query: 115 QAAYK-LDHYAKRLEAKFKQLEKQ 137
+YK LD +AK LEAK K LE++
Sbjct: 807 TESYKSLDLHAKELEAKVKSLEEE 830
>sp|P96722|YWQJ_BACSU UPF0720 protein YwqJ OS=Bacillus subtilis (strain 168) GN=ywqJ PE=1
SV=1
Length = 602
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 54 STQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKL 113
S +Y+ LE ++NA +TKYS + Q T N +S P Y + +++Y SV+++
Sbjct: 167 SLTTEYQNLESLDNAVLTKYSVLMQATSNGKSAS---PMYYD--KKAFHSNEVYKSVIEV 221
Query: 114 E-QAAYKLDHYAKRLEAK 130
E Q +D ++ EA+
Sbjct: 222 ENQGTTYIDAKTQQAEAR 239
>sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo
sapiens GN=TACC3 PE=1 SV=1
Length = 838
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 3 ENVENSLSNKMTSLSTSTSSFEPMISH---DPRLNELATNMFKKTADYLIGELSSTQADY 59
E+ E +L++ TSL TS EP+ +H P L EL F+ A+ L T A+
Sbjct: 485 ESKERALNSASTSLPTSCPGSEPVPTHQQGQPAL-ELKEESFRDPAEVL-----GTGAEV 538
Query: 60 EVLEKMNNATITKYSDMKQ 78
+ LE+ ++ + + KQ
Sbjct: 539 DYLEQFGTSSFKESALRKQ 557
>sp|Q0I260|DAPA_HAES1 4-hydroxy-tetrahydrodipicolinate synthase OS=Haemophilus somnus
(strain 129Pt) GN=dapA PE=3 SV=1
Length = 298
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 20 TSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQI 79
T+ PM +H E+ N KK +Y I +S T A V +AT++ ++K I
Sbjct: 13 TALITPMNNH----GEVDFNALKKLVEYHI--VSGTHAIVSVGTTGESATLSIAENVKTI 66
Query: 80 TVNISFSSARVP 91
+ F+ R+P
Sbjct: 67 LKTLEFADGRIP 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.123 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,065,393
Number of Sequences: 539616
Number of extensions: 1376017
Number of successful extensions: 5037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 5002
Number of HSP's gapped (non-prelim): 83
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)