Your job contains 1 sequence.
>psy8908
MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYE
VLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKL
DHYAKRLEAKFKQLEKQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8908
(137 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036118 - symbol:blos2 "BLOC-1 subunit 2" species:... 288 2.2e-25 1
UNIPROTKB|Q66KB9 - symbol:bloc1s2 "Biogenesis of lysosome... 271 1.4e-23 1
UNIPROTKB|F1S8V1 - symbol:BLOC1S2 "Uncharacterized protei... 260 2.1e-22 1
RGD|1306551 - symbol:Bloc1s2 "biogenesis of lysosomal org... 260 2.1e-22 1
UNIPROTKB|F1N5K4 - symbol:BLOC1S2 "Uncharacterized protei... 259 2.6e-22 1
UNIPROTKB|Q6QNY1 - symbol:BLOC1S2 "Biogenesis of lysosome... 254 9.0e-22 1
UNIPROTKB|Q4R7C8 - symbol:BLOC1S2 "Biogenesis of lysosome... 254 9.0e-22 1
UNIPROTKB|E1BXG7 - symbol:BLOC1S2 "Uncharacterized protei... 246 6.3e-21 1
UNIPROTKB|Q95XD3 - symbol:blos-2 "Biogenesis of lysosome-... 167 1.5e-12 1
TAIR|locus:2157854 - symbol:BLOS2 "AT5G49550" species:370... 98 3.0e-05 1
>FB|FBgn0036118 [details] [associations]
symbol:blos2 "BLOC-1 subunit 2" species:7227 "Drosophila
melanogaster" [GO:0031083 "BLOC-1 complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0042803
EMBL:AE014296 GO:GO:0031083 eggNOG:NOG251755 InterPro:IPR019269
Pfam:PF10046 GeneTree:ENSGT00390000005889 OMA:IALENRV EMBL:BT023680
RefSeq:NP_648427.1 UniGene:Dm.27112 IntAct:Q9VTE0 MINT:MINT-316458
STRING:Q9VTE0 EnsemblMetazoa:FBtr0076202 GeneID:39234
KEGG:dme:Dmel_CG14145 UCSC:CG14145-RA CTD:39234 FlyBase:FBgn0036118
InParanoid:Q9VTE0 OrthoDB:EOG44XH03 PhylomeDB:Q9VTE0
GenomeRNAi:39234 NextBio:812634 Bgee:Q9VTE0 Uniprot:Q9VTE0
Length = 159
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 58/116 (50%), Positives = 82/116 (70%)
Query: 18 TSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMK 77
+S SSFE + HDP L+ LAT MF KT +Y+ EL++ DY++LE+MN ATI KY DM+
Sbjct: 30 SSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMR 89
Query: 78 QITVNISFSSARVPA-YKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
QI N++ S++ + ++QL P ++QID+I D+V KLE AAYKLD Y+ LE + K
Sbjct: 90 QIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 145
>UNIPROTKB|Q66KB9 [details] [associations]
symbol:bloc1s2 "Biogenesis of lysosome-related organelles
complex 1 subunit 2" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0031083 "BLOC-1 complex" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=ISS] GO:GO:0005634
GO:GO:0005813 GO:GO:0045944 GO:GO:0008089 GO:GO:0031175
GO:GO:0048490 GO:GO:0031083 eggNOG:NOG251755 InterPro:IPR019269
Pfam:PF10046 GeneTree:ENSGT00390000005889 CTD:282991
HOGENOM:HOG000111279 HOVERGEN:HBG079627 OrthoDB:EOG43210M
EMBL:CR760883 EMBL:BC080469 RefSeq:NP_001008201.1 UniGene:Str.10311
ProteinModelPortal:Q66KB9 STRING:Q66KB9 Ensembl:ENSXETT00000050858
GeneID:493563 KEGG:xtr:493563 Xenbase:XB-GENE-967291
InParanoid:Q66KB9 OMA:NISKLEH Bgee:Q66KB9 Uniprot:Q66KB9
Length = 147
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 64/134 (47%), Positives = 83/134 (61%)
Query: 5 VENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEK 64
V S S ++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE
Sbjct: 17 VAPSASQDDATVETAEEAVEPP---EADINELCRDMFSKMALYLTGELTTTSEDYKLLEN 73
Query: 65 MNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHY 123
MN T KY +MK I NIS + + Y L P LEQI+QI + V LE AAYKLD Y
Sbjct: 74 MNKLTSLKYMEMKDIAGNISRNLKDLNKKYASLQPYLEQINQIEEQVASLENAAYKLDAY 133
Query: 124 AKRLEAKFKQLEKQ 137
+KRLEAKFK+LEK+
Sbjct: 134 SKRLEAKFKKLEKR 147
>UNIPROTKB|F1S8V1 [details] [associations]
symbol:BLOC1S2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043015 "gamma-tubulin binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0031083 "BLOC-1 complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0000930 "gamma-tubulin complex" evidence=IEA]
GO:GO:0045893 GO:GO:0042981 GO:GO:0008284 GO:GO:0000930
GO:GO:0031083 InterPro:IPR019269 Pfam:PF10046
GeneTree:ENSGT00390000005889 OMA:NISKLEH EMBL:CT827831
Ensembl:ENSSSCT00000011543 Uniprot:F1S8V1
Length = 184
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 58/124 (46%), Positives = 81/124 (65%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 64 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 120
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
+MK I +NIS + + Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+
Sbjct: 121 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 180
Query: 134 LEKQ 137
LEK+
Sbjct: 181 LEKR 184
>RGD|1306551 [details] [associations]
symbol:Bloc1s2 "biogenesis of lysosomal organelles complex-1,
subunit 2" species:10116 "Rattus norvegicus" [GO:0000930
"gamma-tubulin complex" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO;IPI]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0031083 "BLOC-1 complex"
evidence=ISO;ISS;IBA] [GO:0031175 "neuron projection development"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043015 "gamma-tubulin binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=IDA]
RGD:1306551 GO:GO:0005634 GO:GO:0005813 GO:GO:0045944 GO:GO:0055037
GO:GO:0008089 GO:GO:0031175 GO:GO:0048490 GO:GO:0031083
eggNOG:NOG251755 InterPro:IPR019269 Pfam:PF10046
GeneTree:ENSGT00390000005889 OMA:IALENRV CTD:282991
HOGENOM:HOG000111279 HOVERGEN:HBG079627 EMBL:AY786315
IPI:IPI00371660 RefSeq:NP_001032426.1 UniGene:Rn.19119
STRING:Q32WR5 PRIDE:Q32WR5 Ensembl:ENSRNOT00000017006 GeneID:293938
KEGG:rno:293938 UCSC:RGD:1306551 InParanoid:Q32WR5 NextBio:637281
ArrayExpress:Q32WR5 Genevestigator:Q32WR5
GermOnline:ENSRNOG00000012684 Uniprot:Q32WR5
Length = 142
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 58/124 (46%), Positives = 81/124 (65%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 22 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
+MK I +NIS + + Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+
Sbjct: 79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138
Query: 134 LEKQ 137
LEK+
Sbjct: 139 LEKR 142
>UNIPROTKB|F1N5K4 [details] [associations]
symbol:BLOC1S2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043015 "gamma-tubulin binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0031083 "BLOC-1 complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0000930 "gamma-tubulin complex" evidence=IEA]
GO:GO:0045893 GO:GO:0042981 GO:GO:0008284 GO:GO:0000930
GO:GO:0031083 InterPro:IPR019269 Pfam:PF10046
GeneTree:ENSGT00390000005889 OMA:IALENRV EMBL:DAAA02058966
IPI:IPI00690104 Ensembl:ENSBTAT00000014217 ArrayExpress:F1N5K4
Uniprot:F1N5K4
Length = 166
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 58/124 (46%), Positives = 81/124 (65%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 46 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 102
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
+MK I +NIS + + Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+
Sbjct: 103 EMKDIAINISRNLKDLNQKYAGLQPYLDQINIIEEQVAALEQAAYKLDAYSKKLEAKYKK 162
Query: 134 LEKQ 137
LEK+
Sbjct: 163 LEKR 166
>UNIPROTKB|Q6QNY1 [details] [associations]
symbol:BLOC1S2 "Biogenesis of lysosome-related organelles
complex 1 subunit 2" species:9606 "Homo sapiens" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005813 "centrosome"
evidence=IEA;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IEA;IPI] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IBA] [GO:0000930 "gamma-tubulin
complex" evidence=IDA] [GO:0043015 "gamma-tubulin binding"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0042981 "regulation of apoptotic
process" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0031083 "BLOC-1
complex" evidence=IDA] [GO:0032438 "melanosome organization"
evidence=NAS] [GO:0060155 "platelet dense granule organization"
evidence=NAS] [GO:0007020 "microtubule nucleation" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0008089 "anterograde axon
cargo transport" evidence=ISS] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=ISS] GO:GO:0005634 GO:GO:0005813
GO:GO:0045893 GO:GO:0042981 GO:GO:0008284 EMBL:CH471066
GO:GO:0045944 GO:GO:0060155 GO:GO:0055037 EMBL:AL139819
GO:GO:0008089 GO:GO:0031175 GO:GO:0000930 GO:GO:0007020
GO:GO:0032438 GO:GO:0048490 GO:GO:0043015 GO:GO:0031083
eggNOG:NOG251755 InterPro:IPR019269 Pfam:PF10046 OMA:IALENRV
EMBL:AY531265 EMBL:AY278457 EMBL:AK298969 EMBL:AL138921
EMBL:BC020494 IPI:IPI00163483 IPI:IPI00411983 RefSeq:NP_776170.2
UniGene:Hs.34906 ProteinModelPortal:Q6QNY1 IntAct:Q6QNY1
STRING:Q6QNY1 PhosphoSite:Q6QNY1 DMDM:74749300 PaxDb:Q6QNY1
PeptideAtlas:Q6QNY1 PRIDE:Q6QNY1 Ensembl:ENST00000370372
Ensembl:ENST00000441611 GeneID:282991 KEGG:hsa:282991
UCSC:uc001kqv.1 CTD:282991 GeneCards:GC10M102023 HGNC:HGNC:20984
HPA:HPA048088 MIM:609768 neXtProt:NX_Q6QNY1 PharmGKB:PA134936108
HOGENOM:HOG000111279 HOVERGEN:HBG079627 InParanoid:Q6QNY1
PhylomeDB:Q6QNY1 GenomeRNAi:282991 NextBio:93554
ArrayExpress:Q6QNY1 Bgee:Q6QNY1 CleanEx:HS_BLOC1S2
Genevestigator:Q6QNY1 GermOnline:ENSG00000196072 Uniprot:Q6QNY1
Length = 142
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 57/124 (45%), Positives = 80/124 (64%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + + EL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 22 AVETAEEAKEPA---EADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
+MK I +NIS + + Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+
Sbjct: 79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138
Query: 134 LEKQ 137
LEK+
Sbjct: 139 LEKR 142
>UNIPROTKB|Q4R7C8 [details] [associations]
symbol:BLOC1S2 "Biogenesis of lysosome-related organelles
complex 1 subunit 2" species:9541 "Macaca fascicularis" [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0031083
"BLOC-1 complex" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=ISS] GO:GO:0005815 GO:GO:0008089
GO:GO:0031175 GO:GO:0048490 GO:GO:0031083 InterPro:IPR019269
Pfam:PF10046 HOVERGEN:HBG079627 EMBL:AB168891 PRIDE:Q4R7C8
OrthoDB:EOG43210M Uniprot:Q4R7C8
Length = 142
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 57/124 (45%), Positives = 80/124 (64%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + + EL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 22 AVETAEEAKEPA---EADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
+MK I +NIS + + Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+
Sbjct: 79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138
Query: 134 LEKQ 137
LEK+
Sbjct: 139 LEKR 142
>UNIPROTKB|E1BXG7 [details] [associations]
symbol:BLOC1S2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000930 "gamma-tubulin complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0031083 "BLOC-1 complex" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043015 "gamma-tubulin binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
GO:GO:0045893 GO:GO:0042981 GO:GO:0008284 GO:GO:0000930
GO:GO:0031083 InterPro:IPR019269 Pfam:PF10046
GeneTree:ENSGT00390000005889 OMA:IALENRV EMBL:AADN02027784
IPI:IPI00603110 Ensembl:ENSGALT00000040091 ArrayExpress:E1BXG7
Uniprot:E1BXG7
Length = 143
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 58/126 (46%), Positives = 80/126 (63%)
Query: 15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
++ T+ + EP + +NEL +MF K A YL GEL++T DY++LE MN T KY
Sbjct: 21 AVETAEEAKEPA---EADINELCKDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 77
Query: 75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLE--AKF 131
+MK I +NIS + + Y L P LEQI+ I + V LEQAAYKLD Y+KRL +K+
Sbjct: 78 EMKDIAINISRNLKDLNQKYAALQPYLEQINLIEEQVAALEQAAYKLDAYSKRLGNYSKY 137
Query: 132 KQLEKQ 137
K+LEK+
Sbjct: 138 KKLEKR 143
>UNIPROTKB|Q95XD3 [details] [associations]
symbol:blos-2 "Biogenesis of lysosome-related organelles
complex 1 subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0031083 "BLOC-1
complex" evidence=TAS] GO:GO:0016197 GO:GO:0031083 eggNOG:NOG251755
InterPro:IPR019269 Pfam:PF10046 EMBL:FO081731 RefSeq:NP_500967.1
ProteinModelPortal:Q95XD3 STRING:Q95XD3 PaxDb:Q95XD3
EnsemblMetazoa:Y73B6BL.30.1 EnsemblMetazoa:Y73B6BL.30.2
GeneID:177395 KEGG:cel:CELE_Y73B6BL.30 UCSC:Y73B6BL.30 CTD:177395
WormBase:Y73B6BL.30 GeneTree:ENSGT00390000005889
HOGENOM:HOG000017791 InParanoid:Q95XD3 OMA:IALENRV NextBio:896632
Uniprot:Q95XD3
Length = 132
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 17 STSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDM 76
STS+ + P + +LA NM K + +L + +Y++LE MNN T +Y DM
Sbjct: 9 STSSPPVPSTPAPVPHIRQLADNMTDKVGQFFQHQLEGSIEEYKLLETMNNTTAQRYVDM 68
Query: 77 KQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE 135
K + ++ + Y+ L P L QID + +S +LE+A L++Y +LE+K ++
Sbjct: 69 KVVAEKVAGKLDNLNQKYENLRPYLSQIDAMDESTRRLEEATAVLENYVTQLESKLTNIQ 128
Query: 136 KQ 137
+Q
Sbjct: 129 QQ 130
>TAIR|locus:2157854 [details] [associations]
symbol:BLOS2 "AT5G49550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010048 "vernalization response" evidence=RCA]
EMBL:CP002688 GO:GO:0005768 GO:GO:0031083 EMBL:AB023033
EMBL:AK220691 EMBL:AY087067 IPI:IPI00517372 IPI:IPI00529479
RefSeq:NP_568711.1 UniGene:At.29779 IntAct:F4K657 PRIDE:F4K657
EnsemblPlants:AT5G49550.1 GeneID:835016 KEGG:ath:AT5G49550
TAIR:At5g49550 eggNOG:NOG251755 HOGENOM:HOG000238855
InParanoid:Q570L7 OMA:KSAYHIS InterPro:IPR019269 Pfam:PF10046
Uniprot:F4K657
Length = 127
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPA 92
L E N+F + + EL T ++LEKMN ++Y DM + + + ++ +
Sbjct: 8 LAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAEQMKS 67
Query: 93 YKQLIPQ-LEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
+ + + Q+D I V + E LD Y LE+K +
Sbjct: 68 KSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKIR 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.123 0.319 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 137 137 0.00091 102 3 10 23 0.48 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 547 (58 KB)
Total size of DFA: 148 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.42u 0.09s 24.51t Elapsed: 00:00:20
Total cpu time: 24.42u 0.09s 24.51t Elapsed: 00:00:20
Start: Thu Aug 15 13:01:49 2013 End: Thu Aug 15 13:02:09 2013