BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8909
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VTE0|BL1S2_DROME Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Drosophila melanogaster GN=blos2 PE=1 SV=2
Length = 159
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 82/116 (70%)
Query: 18 TSTSSFEPMISHDPRLNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMK 77
+S SSFE + HDP L+ LAT MF KT +Y+ ELN+ DY++LE+MN ATI KY DM+
Sbjct: 30 SSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMR 89
Query: 78 QITVNISNSIEEQNQRYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 133
QI N++ S E + +++QL P ++QID+I D+V KLE AAYKLD Y+ LE + K
Sbjct: 90 QIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 145
>sp|Q66KB9|BL1S2_XENTR Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Xenopus tropicalis GN=bloc1s2 PE=2 SV=1
Length = 147
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 87/134 (64%), Gaps = 3/134 (2%)
Query: 5 VENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELNSTQADYEVLEK 64
V S S ++ T+ + EP + +NEL +MF K A YL GEL +T DY++LE
Sbjct: 17 VAPSASQDDATVETAEEAVEP---PEADINELCRDMFSKMALYLTGELTTTSEDYKLLEN 73
Query: 65 MNNATITKYSDMKQITVNISNSIEEQNQRYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHY 124
MN T KY +MK I NIS ++++ N++Y L P LEQI+QI + V LE AAYKLD Y
Sbjct: 74 MNKLTSLKYMEMKDIAGNISRNLKDLNKKYASLQPYLEQINQIEEQVASLENAAYKLDAY 133
Query: 125 AKRLEAKFKQLEKQ 138
+KRLEAKFK+LEK+
Sbjct: 134 SKRLEAKFKKLEKR 147
>sp|Q9CWG9|BL1S2_MOUSE Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Mus musculus GN=Bloc1s2 PE=1 SV=1
Length = 143
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 78/106 (73%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
+NEL +MF K A YL GEL +T DY++LE MN T KY +MK I +NIS ++++ NQ
Sbjct: 38 INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 97
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 138
+Y +L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 98 KYAELQPYLDQINMIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 143
>sp|Q32WR5|BL1S2_RAT Biogenesis of lysosome-related organelles complex-1 subunit 2
OS=Rattus norvegicus GN=Bloc1s2 PE=2 SV=1
Length = 142
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 77/106 (72%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
+NEL +MF K A YL GEL +T DY++LE MN T KY +MK I +NIS ++++ NQ
Sbjct: 37 INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 138
+Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|Q4R7C8|BL1S2_MACFA Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Macaca fascicularis GN=BLOC1S2 PE=2 SV=1
Length = 142
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
+ EL +MF K A YL GEL +T DY++LE MN T KY +MK I +NIS ++++ NQ
Sbjct: 37 ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 138
+Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|Q6QNY1|BL1S2_HUMAN Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Homo sapiens GN=BLOC1S2 PE=1 SV=1
Length = 142
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
+ EL +MF K A YL GEL +T DY++LE MN T KY +MK I +NIS ++++ NQ
Sbjct: 37 ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 138
+Y L P L+QI+ I + V LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97 KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142
>sp|A7RZS0|BL1S2_NEMVE Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Nematostella vectensis GN=bloc1s2 PE=3 SV=1
Length = 171
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
L E F K YL GEL ++ DY +LE++NN T KY +M +T ++ ++E+ +
Sbjct: 66 LKETCRVAFDKITQYLNGELTASLEDYTLLEQLNNLTTDKYKEMSTMTKSLITTMEKLDD 125
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 138
+YK L P LEQID+I DSV LEQAAY+LD Y+K+LE KFK+LE++
Sbjct: 126 KYKSLQPYLEQIDRIEDSVSSLEQAAYRLDAYSKKLENKFKRLERR 171
>sp|Q95XD3|BL1S2_CAEEL Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Caenorhabditis elegans GN=blos-2 PE=1 SV=1
Length = 132
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%)
Query: 17 STSTSSFEPMISHDPRLNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDM 76
STS+ + P + +LA NM K + +L + +Y++LE MNN T +Y DM
Sbjct: 9 STSSPPVPSTPAPVPHIRQLADNMTDKVGQFFQHQLEGSIEEYKLLETMNNTTAQRYVDM 68
Query: 77 KQITVNISNSIEEQNQRYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE 136
K + ++ ++ NQ+Y+ L P L QID + +S +LE+A L++Y +LE+K ++
Sbjct: 69 KVVAEKVAGKLDNLNQKYENLRPYLSQIDAMDESTRRLEEATAVLENYVTQLESKLTNIQ 128
Query: 137 KQ 138
+Q
Sbjct: 129 QQ 130
>sp|Q54Y67|BL1S2_DICDI Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Dictyostelium discoideum GN=bloc1s2 PE=3 SV=2
Length = 234
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%)
Query: 40 MFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQRYKQLIP 99
MF K + Y+ EL +T +DY +L +MNN T +KY DM +T +S + + +Y++ P
Sbjct: 85 MFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVFMGDLKIKYEEFQP 144
Query: 100 QLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK 137
++I+++ +V LE+ LD Y KRLE K K ++K
Sbjct: 145 YFDKINELDKNVTDLEKTVQLLDEYTKRLEQKVKNIDK 182
>sp|F4K657|BL1S2_ARATH Biogenesis of lysosome-related organelles complex 1 subunit 2
OS=Arabidopsis thaliana GN=BLOS2 PE=1 SV=1
Length = 127
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 33 LNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQ 92
L E N+F + + EL T ++LEKMN ++Y DM + + E+
Sbjct: 8 LAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAEQMKS 67
Query: 93 RYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 133
+ L + Q+D I V + E LD Y LE+K +
Sbjct: 68 KSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKIR 108
>sp|P19001|K1C19_MOUSE Keratin, type I cytoskeletal 19 OS=Mus musculus GN=Krt19 PE=1 SV=1
Length = 403
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 35 ELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIEEQNQRY 94
EL + + K A L G L T+A Y V + I+ + Q++ ++ IE QNQ Y
Sbjct: 312 ELQSQLSMKAA--LEGTLAETEARYGVQLSQIQSVISGFE--AQLS-DVRADIERQNQEY 366
Query: 95 KQLI---PQLEQIDQIYDSVLKLEQAAY 119
KQL+ +LEQ Y S+L+ ++A Y
Sbjct: 367 KQLMDIKSRLEQEIATYRSLLEGQEAHY 394
>sp|P23994|LCRV_YERPS Virulence-associated V antigen OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=lcrV PE=4 SV=1
Length = 326
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 29 HDPRLNELATNMFKKTADYLIGELNSTQADYEVLEKMNNATITKYSDMKQITVNISNSIE 88
HD +N + N++ T + E+ A+Y++LEKM TI + K+I V+I N +E
Sbjct: 187 HDKSINLMDKNLYGYTDE----EIFKASAEYKILEKMPQTTIQEGETEKKI-VSIKNFLE 241
Query: 89 EQNQRYKQL 97
+ +R L
Sbjct: 242 SEKKRTGAL 250
>sp|Q24V00|EX7L_DESHY Exodeoxyribonuclease 7 large subunit OS=Desulfitobacterium
hafniense (strain Y51) GN=xseA PE=3 SV=1
Length = 406
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 33/56 (58%)
Query: 74 SDMKQITVNISNSIEEQNQRYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLE 129
SD++Q+ + +++ Q QR +Q + L+ I + + +++Q +LD ++R+E
Sbjct: 273 SDLEQLEARLHSTMSSQLQRKRQRLDSLKTIGPLSNPFWRIDQNRQRLDSLSERVE 328
>sp|A1RRX4|SYS_PYRIL Serine--tRNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 /
JCM 9189) GN=serS PE=3 SV=1
Length = 448
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 59 YEVLEKMNNAT--ITKYSDMKQITVNISNSIEEQNQRYKQLIPQLEQIDQIYDSVLKLEQ 116
Y VLE + N + K +++ ++ + E +++++QL +++++ +Y+ + K
Sbjct: 3 YSVLEALRNNPDYVKKVLTARRLDTSLVDKFLELDKKWRQLKKEVDELRHVYNQLSKEGA 62
Query: 117 AA-----YKLDHYAKRLEAKFKQLEKQ 138
A ++ A+ L AK + LEK+
Sbjct: 63 KAPPERRREIVEKARELAAKLENLEKE 89
>sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2
SV=2
Length = 996
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 87 IEEQNQRYKQLIPQL---EQIDQIYDSVLKLEQAAYK-LDHYAKRLEAKFKQLEKQ 138
+EE+ Q +L QL E + + ++ LK +YK LD +AK LEAK K LE++
Sbjct: 775 LEEKEQLISKLKSQLTSSEDLQSLAETQLKCVTESYKSLDLHAKELEAKVKSLEEE 830
>sp|Q754H0|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70 PE=3
SV=1
Length = 614
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 1 MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNM---FKKTADYLIGELNSTQA 57
+T + SLS ++ S S+ F P+I + RLN L N+ F + I +L S +
Sbjct: 24 LTREITGSLSKITSTTSKSSKLFAPIIETNTRLNVLKRNIESSFDSVSS--IKDLASDAS 81
Query: 58 DYEVL--EKMNNATITKYSDMKQITVNISNSIEEQNQR---YKQLIPQLEQIDQIYDSVL 112
YE++ +++ + K+ +I + + E+++ ++ ++ LE++ I + L
Sbjct: 82 KYEIILEQEITQVGLRKFIKTLHKVDDIMDDLREKSKSTADFRGIVTHLEELTMIGEKNL 141
Query: 113 KL 114
++
Sbjct: 142 QI 143
>sp|Q9DC71|RT15_MOUSE 28S ribosomal protein S15, mitochondrial OS=Mus musculus GN=Mrps15
PE=2 SV=2
Length = 258
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 94 YKQLIPQLEQIDQIYDSVLKLEQAAYK 120
YK +IP +E++D + +L LE A+ K
Sbjct: 76 YKDIIPNIEKVDDVVKRILSLEMASRK 102
>sp|Q5XI37|RT15_RAT 28S ribosomal protein S15, mitochondrial OS=Rattus norvegicus
GN=Mrps15 PE=2 SV=1
Length = 257
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 94 YKQLIPQLEQIDQIYDSVLKLEQAAYK 120
YK +IP +E++D + +L LE A+ K
Sbjct: 75 YKNIIPNMEKVDDVVKRILSLEMASRK 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.316
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,377,978
Number of Sequences: 539616
Number of extensions: 1486083
Number of successful extensions: 7330
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 7182
Number of HSP's gapped (non-prelim): 385
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)