BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8911
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1
Length = 176
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
LDYTLWP V V PF K V D +G ++ Y VPE+L+ L+ AAASRT
Sbjct: 12 LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 71
Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
SEI A Q+L L +L +YF ++EIYPG K THFE L++ TGI + M+FFDDE RN DV
Sbjct: 72 SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 131
Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
S LGVTCIH++ GM+ L +GL+ +A
Sbjct: 132 SKLGVTCIHIQNGMNLQTLSQGLETFA 158
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 79/109 (72%)
Query: 3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF 62
V D RG ++ YP+VP +LK L+ AAASRTSEI+GA QLL+LF+ +YF H++I+
Sbjct: 37 VRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY 96
Query: 63 PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111
PG K THF L++ TGI + M+FFDDE RN DVS LGVTCI +++GM
Sbjct: 97 PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM 145
>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1
Length = 164
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
LDYTLWP V V PF K V D +G I+ Y VPE+L L+ VAAASRT
Sbjct: 12 LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRT 71
Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
SEI A Q+L L +L +YF +EIYPG K THFE L TG+ + MVFFDDE RN DV
Sbjct: 72 SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDV 131
Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
LGVTCIH++ GMS L +GL+ +A
Sbjct: 132 GRLGVTCIHIRDGMSLQTLTQGLETFA 158
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 78/121 (64%)
Query: 3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF 62
V D RG +I+ YP+VP +L L+ VAAASRTSEIQGA QLL+LF+ +YF ++I+
Sbjct: 37 VRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY 96
Query: 63 PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSV 122
PG K THF L TG+ + MVFFDDE RN DV LGVTCI + DGM+ G
Sbjct: 97 PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156
Query: 123 F 123
F
Sbjct: 157 F 157
>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.31 PE=1 SV=2
Length = 172
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 133 LDYTLWPLHVHD-LVAPFKKIGQK---VMDAKGTLIKYYRGVPEILRYLKENKCLVAAAS 188
LDYTLWPL + + APFK ++D GT I +Y + IL+ L+ K + AS
Sbjct: 15 LDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRNQKVTLCVAS 74
Query: 189 RTSEILHAKQILNLINLN---------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVF 239
RT +AKQ LNL+ + ++F+ + +PG K HF+ + +GI+Y++MVF
Sbjct: 75 RTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNESGIDYREMVF 134
Query: 240 FDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ 270
FDDE RN +V LGVT + K S +L
Sbjct: 135 FDDESRN-REVERLGVTFLEKIKKNSLNILS 164
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--------- 53
++D G I +Y D+ GIL+ L+ + ASRT + A+Q L+L
Sbjct: 42 LIDKYGTEICFYSDITGILQELRNQKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAI 101
Query: 54 QYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 103
++F + + +PG K HF + +GI+Y++MVFFDDE RN +V LGVT
Sbjct: 102 EFFTYVKAWPGSKMDHFKEIHNESGIDYREMVFFDDESRN-REVERLGVT 150
>sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1
SV=1
Length = 178
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 133 LDYTLWPL----HVHDLVAPFKKIGQKVMDA---KGTLIKYYRGVPEILRYLKENKCLVA 185
LDYT+WP H+H P K +V+ G + Y+ +P IL LK+N +
Sbjct: 12 LDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDLKDNGVKLM 71
Query: 186 AASRTSEILHAKQIL---------------NLINLNQYFSNKEIYPGPKTTHFESLKKAT 230
ASRT A++IL NL + Q+ +I G + L +
Sbjct: 72 TASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKI--GHLRDGLKDLYNTS 129
Query: 231 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261
++ K + FDDE RN +V GV ++V+
Sbjct: 130 DLKSKKICLFDDESRNK-EVEKYGVKFVYVR 159
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN---------WNQYFDH 58
G + Y D+P IL LK N + ASRT + AQ++L +F FD
Sbjct: 47 GYELTIYKDIPRILGDLKDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDE 106
Query: 59 KQIFPGQKTTH----FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED 109
Q K H +L + ++ K + FDDE RN +V GV + V D
Sbjct: 107 FQWGERSKIGHLRDGLKDLYNTSDLKSKKICLFDDESRNK-EVEKYGVKFVYVRD 160
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-------SNKEI 214
L + Y GV + L++LK N +A + E A +L+ + L +YF + +
Sbjct: 98 ALTEVYPGVVDTLKWLKRNGVEMALITNKPERFVAP-LLDEMKLGRYFRWIIGGDTLPQQ 156
Query: 215 YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH 266
P P F + K GIE +D +F D + GV C + G +H
Sbjct: 157 KPDPAALLF--VMKMAGIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYNH 206
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD---HKQIFPGQ 65
A + YP V LK+LK+N +A + E + LLD +YF P Q
Sbjct: 98 ALTEVYPGVVDTLKWLKRNGVEMALITNKPE-RFVAPLLDEMKLGRYFRWIIGGDTLPQQ 156
Query: 66 KTTHFANL--KKATGIEYKDMVFFDDEERNSHDVSPLGVTC 104
K A L K GIE +D +F D + GV C
Sbjct: 157 KPDPAALLFVMKMAGIEPEDALFVGDSRNDVLAAKAAGVRC 197
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
+ ++ +A G D VFFDD N + LG+T ILV+D T
Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 189
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261
P+ ++ + +A G D VFFDD N + LG+T I VK
Sbjct: 142 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
+ ++ +A G D VFFDD N + LG+T ILV+D T
Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 189
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261
P+ ++ + +A G D VFFDD N + LG+T I VK
Sbjct: 142 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185
>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5)
GN=gph PE=1 SV=1
Length = 213
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD 57
+ K YP++P L+ LK +A S E + ++++LD+ N + YFD
Sbjct: 78 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLE-ELSKKILDILNLSGYFD 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,118,479
Number of Sequences: 539616
Number of extensions: 4504474
Number of successful extensions: 9659
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9634
Number of HSP's gapped (non-prelim): 17
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)