Query psy8911
Match_columns 280
No_of_seqs 316 out of 2925
Neff 9.0
Searched_HMMs 46136
Date Fri Aug 16 22:38:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8911.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8911hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12689 Acid_PPase: Acid Phos 100.0 5E-31 1.1E-35 210.1 12.9 155 125-279 2-169 (169)
2 TIGR01685 MDP-1 magnesium-depe 99.9 2.6E-27 5.7E-32 190.5 13.9 154 125-278 1-174 (174)
3 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.9 2.6E-23 5.6E-28 177.7 11.4 206 10-261 22-241 (242)
4 PLN02770 haloacid dehalogenase 99.9 3.6E-23 7.8E-28 177.4 9.3 108 162-270 105-217 (248)
5 PRK13226 phosphoglycolate phos 99.9 7.7E-23 1.7E-27 173.3 8.0 103 162-265 92-199 (229)
6 PRK13288 pyrophosphatase PpaX; 99.9 2.9E-22 6.2E-27 168.1 8.4 107 162-269 79-191 (214)
7 COG0546 Gph Predicted phosphat 99.9 2.8E-22 6E-27 168.9 6.9 101 164-265 88-193 (220)
8 PRK14988 GMP/IMP nucleotidase; 99.9 3.2E-22 7E-27 168.9 7.1 103 162-265 90-198 (224)
9 TIGR01656 Histidinol-ppas hist 99.9 1.5E-21 3.3E-26 154.2 8.8 124 127-263 1-147 (147)
10 COG0637 Predicted phosphatase/ 99.9 7.2E-22 1.6E-26 166.3 7.3 104 161-265 82-190 (221)
11 PRK11587 putative phosphatase; 99.9 1.2E-21 2.5E-26 164.9 8.2 103 162-266 80-187 (218)
12 PLN03243 haloacid dehalogenase 99.9 1.2E-21 2.7E-26 168.6 8.5 99 163-262 107-210 (260)
13 PRK13225 phosphoglycolate phos 99.9 1.2E-21 2.6E-26 169.7 8.4 103 162-265 139-243 (273)
14 PRK10826 2-deoxyglucose-6-phos 99.9 1E-21 2.2E-26 165.7 7.4 103 162-265 89-196 (222)
15 TIGR02253 CTE7 HAD superfamily 99.8 4.4E-21 9.5E-26 161.5 10.9 102 163-265 92-199 (221)
16 TIGR01449 PGP_bact 2-phosphogl 99.8 1.7E-21 3.7E-26 163.0 8.3 102 163-265 83-189 (213)
17 PLN02575 haloacid dehalogenase 99.8 1.7E-21 3.7E-26 174.0 8.4 105 163-268 214-323 (381)
18 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 6.1E-21 1.3E-25 148.0 9.7 120 127-261 1-131 (132)
19 PRK06769 hypothetical protein; 99.8 1E-20 2.2E-25 153.4 9.7 125 126-266 4-142 (173)
20 TIGR03351 PhnX-like phosphonat 99.8 1E-20 2.3E-25 159.2 9.3 106 163-269 85-200 (220)
21 PRK08942 D,D-heptose 1,7-bisph 99.8 4.3E-20 9.3E-25 151.0 11.1 127 125-267 2-153 (181)
22 TIGR00213 GmhB_yaeD D,D-heptos 99.8 3.8E-20 8.3E-25 150.6 9.8 122 127-265 2-155 (176)
23 PRK13223 phosphoglycolate phos 99.8 1.4E-20 3.1E-25 163.3 7.1 102 163-265 99-205 (272)
24 TIGR01261 hisB_Nterm histidino 99.8 8.7E-20 1.9E-24 145.8 11.1 132 127-271 2-158 (161)
25 PLN02940 riboflavin kinase 99.8 1.1E-20 2.4E-25 171.1 5.8 103 162-265 90-198 (382)
26 TIGR01681 HAD-SF-IIIC HAD-supe 99.8 5.8E-20 1.3E-24 141.6 7.4 116 127-252 1-126 (128)
27 TIGR01452 PGP_euk phosphoglyco 99.8 2.7E-19 5.9E-24 156.0 10.8 225 12-271 18-258 (279)
28 TIGR01685 MDP-1 magnesium-depe 99.8 1.5E-19 3.2E-24 145.6 8.1 118 3-123 36-172 (174)
29 PLN02770 haloacid dehalogenase 99.8 1.9E-19 4.1E-24 154.4 8.4 105 9-116 105-216 (248)
30 PRK10725 fructose-1-P/6-phosph 99.8 1E-19 2.2E-24 149.4 6.3 96 163-261 86-186 (188)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.8 1.2E-19 2.5E-24 148.6 6.4 95 163-260 86-185 (185)
32 PF12689 Acid_PPase: Acid Phos 99.8 2.1E-19 4.4E-24 143.5 7.4 123 2-124 35-167 (169)
33 PRK10563 6-phosphogluconate ph 99.8 1.3E-19 2.9E-24 152.6 5.9 96 163-262 86-187 (221)
34 PRK13222 phosphoglycolate phos 99.8 4.5E-19 9.7E-24 149.6 8.9 102 163-265 91-197 (226)
35 TIGR01422 phosphonatase phosph 99.8 1.1E-18 2.3E-23 150.1 9.7 102 163-265 97-205 (253)
36 PRK06698 bifunctional 5'-methy 99.8 7.4E-19 1.6E-23 163.4 8.3 100 163-265 328-431 (459)
37 TIGR01454 AHBA_synth_RP 3-amin 99.8 2.5E-18 5.5E-23 143.2 9.5 107 162-269 72-184 (205)
38 TIGR01668 YqeG_hyp_ppase HAD s 99.8 4.2E-18 9.2E-23 137.7 10.3 114 126-265 25-140 (170)
39 PLN02645 phosphoglycolate phos 99.8 4.7E-18 1E-22 150.3 11.4 223 12-269 44-284 (311)
40 TIGR01664 DNA-3'-Pase DNA 3'-p 99.8 2.4E-18 5.2E-23 138.4 8.6 120 126-259 13-160 (166)
41 PRK14988 GMP/IMP nucleotidase; 99.8 1.6E-18 3.4E-23 146.4 7.5 100 9-111 90-197 (224)
42 TIGR01428 HAD_type_II 2-haloal 99.8 2.4E-18 5.1E-23 142.5 8.0 97 10-109 90-193 (198)
43 TIGR01422 phosphonatase phosph 99.7 2.8E-18 6E-23 147.6 8.6 101 9-112 96-205 (253)
44 TIGR01428 HAD_type_II 2-haloal 99.7 4E-18 8.7E-23 141.2 9.0 99 163-262 90-193 (198)
45 PLN03243 haloacid dehalogenase 99.7 1.8E-18 3.9E-23 148.9 6.5 99 9-110 106-211 (260)
46 PHA02597 30.2 hypothetical pro 99.7 1.5E-18 3.3E-23 143.6 5.6 100 162-265 71-178 (197)
47 PLN02919 haloacid dehalogenase 99.7 3.7E-18 8E-23 171.6 9.1 105 165-270 161-271 (1057)
48 PRK10826 2-deoxyglucose-6-phos 99.7 4.7E-18 1E-22 143.3 8.1 102 8-112 88-196 (222)
49 PRK13288 pyrophosphatase PpaX; 99.7 5.6E-18 1.2E-22 142.0 8.5 102 8-112 78-186 (214)
50 TIGR00338 serB phosphoserine p 99.7 3E-18 6.5E-23 144.1 6.6 97 162-259 82-193 (219)
51 TIGR01454 AHBA_synth_RP 3-amin 99.7 8.5E-18 1.8E-22 140.0 8.8 101 9-112 72-179 (205)
52 COG1011 Predicted hydrolase (H 99.7 5.9E-18 1.3E-22 143.0 7.7 99 163-263 97-201 (229)
53 TIGR02253 CTE7 HAD superfamily 99.7 7.8E-18 1.7E-22 141.7 8.3 101 9-112 91-199 (221)
54 COG0637 Predicted phosphatase/ 99.7 6.4E-18 1.4E-22 142.3 7.1 103 6-111 80-189 (221)
55 TIGR01449 PGP_bact 2-phosphogl 99.7 9.7E-18 2.1E-22 140.3 8.1 101 9-112 82-189 (213)
56 PRK13478 phosphonoacetaldehyde 99.7 2E-17 4.4E-22 143.4 10.3 102 163-265 99-207 (267)
57 PLN02575 haloacid dehalogenase 99.7 1.2E-17 2.6E-22 149.3 8.2 102 9-113 213-321 (381)
58 PRK05446 imidazole glycerol-ph 99.7 7.3E-17 1.6E-21 143.4 13.1 136 126-274 2-162 (354)
59 PRK09456 ?-D-glucose-1-phospha 99.7 1.7E-17 3.7E-22 137.6 8.4 107 164-271 83-195 (199)
60 TIGR01686 FkbH FkbH-like domai 99.7 1.9E-17 4.1E-22 147.0 8.9 119 126-256 3-125 (320)
61 PRK09456 ?-D-glucose-1-phospha 99.7 9.8E-18 2.1E-22 139.0 6.6 104 11-117 83-194 (199)
62 PRK13226 phosphoglycolate phos 99.7 1.6E-17 3.4E-22 140.9 7.9 101 8-111 91-198 (229)
63 PF13419 HAD_2: Haloacid dehal 99.7 1.6E-17 3.4E-22 133.8 7.3 96 9-107 74-176 (176)
64 TIGR01672 AphA HAD superfamily 99.7 1.9E-17 4E-22 139.9 7.5 133 127-264 64-214 (237)
65 PRK11587 putative phosphatase; 99.7 2.7E-17 5.8E-22 138.4 8.4 100 8-111 79-185 (218)
66 TIGR01549 HAD-SF-IA-v1 haloaci 99.7 1.2E-17 2.7E-22 132.6 6.0 92 160-254 59-154 (154)
67 COG0546 Gph Predicted phosphat 99.7 3.2E-17 6.9E-22 138.1 8.6 99 11-112 88-193 (220)
68 PF13419 HAD_2: Haloacid dehal 99.7 3.2E-17 6.9E-22 132.0 8.3 98 162-260 74-176 (176)
69 PRK13478 phosphonoacetaldehyde 99.7 2.5E-17 5.4E-22 142.8 8.1 102 8-112 97-207 (267)
70 COG4996 Predicted phosphatase 99.7 2.6E-16 5.7E-21 116.8 12.0 141 128-269 2-151 (164)
71 TIGR01990 bPGM beta-phosphoglu 99.7 2.7E-17 6E-22 134.5 7.3 95 164-261 86-185 (185)
72 PRK13225 phosphoglycolate phos 99.7 3.4E-17 7.3E-22 142.0 8.2 104 7-113 137-244 (273)
73 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 3.4E-17 7.4E-22 135.6 7.8 101 163-264 78-193 (201)
74 TIGR01670 YrbI-phosphatas 3-de 99.7 2.6E-17 5.7E-22 130.9 6.7 120 127-264 2-121 (154)
75 TIGR03351 PhnX-like phosphonat 99.7 5E-17 1.1E-21 136.8 8.8 101 9-112 84-195 (220)
76 smart00577 CPDc catalytic doma 99.7 4.3E-17 9.4E-22 128.8 7.7 130 127-260 3-141 (148)
77 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 1E-16 2.2E-21 138.1 10.6 193 13-264 22-227 (257)
78 TIGR01691 enolase-ppase 2,3-di 99.7 4.7E-17 1E-21 136.3 8.1 101 161-262 91-197 (220)
79 TIGR01990 bPGM beta-phosphoglu 99.7 3.7E-17 8E-22 133.7 7.0 94 10-108 85-185 (185)
80 PRK09449 dUMP phosphatase; Pro 99.7 8E-17 1.7E-21 135.9 9.2 98 163-262 93-197 (224)
81 TIGR02726 phenyl_P_delta pheny 99.7 1.1E-16 2.3E-21 128.7 9.1 119 124-260 5-124 (169)
82 PRK06769 hypothetical protein; 99.7 5.9E-17 1.3E-21 131.4 7.3 103 9-112 25-141 (173)
83 TIGR01509 HAD-SF-IA-v3 haloaci 99.7 6.9E-17 1.5E-21 131.6 7.8 93 11-107 84-183 (183)
84 PLN02811 hydrolase 99.7 7.5E-17 1.6E-21 135.8 8.1 102 163-265 76-188 (220)
85 TIGR00213 GmhB_yaeD D,D-heptos 99.7 1.1E-16 2.4E-21 130.2 8.7 100 9-112 23-155 (176)
86 TIGR01509 HAD-SF-IA-v3 haloaci 99.7 1.1E-16 2.4E-21 130.5 8.7 95 164-260 84-183 (183)
87 PRK09449 dUMP phosphatase; Pro 99.7 4.7E-17 1E-21 137.3 6.7 99 7-109 90-197 (224)
88 cd01427 HAD_like Haloacid deha 99.7 1.5E-16 3.3E-21 122.5 8.9 118 128-260 1-139 (139)
89 TIGR02247 HAD-1A3-hyp Epoxide 99.7 7.9E-17 1.7E-21 134.7 6.9 101 163-264 92-199 (211)
90 TIGR01691 enolase-ppase 2,3-di 99.7 1.6E-16 3.5E-21 133.1 8.6 103 7-110 90-198 (220)
91 TIGR02252 DREG-2 REG-2-like, H 99.7 1.3E-16 2.7E-21 132.7 7.9 95 163-259 103-203 (203)
92 TIGR02247 HAD-1A3-hyp Epoxide 99.7 4.9E-17 1.1E-21 136.0 5.3 101 9-112 91-200 (211)
93 PHA02530 pseT polynucleotide k 99.7 1.9E-16 4.2E-21 139.4 8.9 127 126-263 158-298 (300)
94 TIGR01656 Histidinol-ppas hist 99.7 1.6E-16 3.5E-21 125.5 7.4 100 10-110 25-147 (147)
95 TIGR02252 DREG-2 REG-2-like, H 99.7 1.2E-16 2.6E-21 132.7 6.9 93 10-106 103-203 (203)
96 TIGR02254 YjjG/YfnB HAD superf 99.7 2.6E-16 5.5E-21 132.6 8.7 99 163-263 95-200 (224)
97 TIGR01261 hisB_Nterm histidino 99.7 2E-16 4.4E-21 126.4 7.5 98 8-110 25-149 (161)
98 PLN02940 riboflavin kinase 99.7 1.6E-16 3.6E-21 144.0 7.6 100 9-111 90-197 (382)
99 PLN02779 haloacid dehalogenase 99.7 3.5E-16 7.5E-21 136.7 9.2 100 164-265 143-250 (286)
100 PLN02954 phosphoserine phospha 99.7 1.6E-16 3.5E-21 134.0 6.8 97 164-263 83-198 (224)
101 PRK08942 D,D-heptose 1,7-bisph 99.7 5.5E-16 1.2E-20 126.7 9.3 103 7-113 24-152 (181)
102 PLN02811 hydrolase 99.6 2.2E-16 4.7E-21 133.0 6.8 99 10-111 76-187 (220)
103 TIGR02009 PGMB-YQAB-SF beta-ph 99.6 2.3E-16 5E-21 128.9 6.6 94 9-107 85-185 (185)
104 TIGR02254 YjjG/YfnB HAD superf 99.6 2.9E-16 6.2E-21 132.3 7.2 97 10-110 95-200 (224)
105 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 8.8E-16 1.9E-20 118.9 9.2 97 9-108 22-131 (132)
106 PLN02779 haloacid dehalogenase 99.6 4.5E-16 9.7E-21 136.0 7.9 101 11-112 143-250 (286)
107 TIGR01993 Pyr-5-nucltdase pyri 99.6 3.6E-16 7.7E-21 128.0 6.8 94 163-260 82-184 (184)
108 COG1011 Predicted hydrolase (H 99.6 5.9E-16 1.3E-20 130.8 8.2 98 10-111 97-202 (229)
109 PRK13223 phosphoglycolate phos 99.6 5.4E-16 1.2E-20 134.7 8.1 100 10-112 99-205 (272)
110 PRK09484 3-deoxy-D-manno-octul 99.6 6E-16 1.3E-20 126.6 7.7 118 125-261 20-138 (183)
111 PRK11009 aphA acid phosphatase 99.6 1.1E-15 2.3E-20 129.1 9.0 133 128-265 65-215 (237)
112 PRK10563 6-phosphogluconate ph 99.6 5.9E-16 1.3E-20 130.4 6.3 96 9-109 85-187 (221)
113 PRK13222 phosphoglycolate phos 99.6 1.5E-15 3.2E-20 128.1 8.4 100 9-111 90-196 (226)
114 PRK10725 fructose-1-P/6-phosph 99.6 9.2E-16 2E-20 125.9 6.9 95 9-108 85-186 (188)
115 COG2179 Predicted hydrolase of 99.6 4.7E-15 1E-19 115.3 10.0 110 127-262 29-139 (175)
116 PRK11133 serB phosphoserine ph 99.6 8.4E-16 1.8E-20 135.8 6.2 97 162-259 178-289 (322)
117 KOG2914|consensus 99.6 5.9E-16 1.3E-20 128.7 4.7 101 161-262 88-197 (222)
118 TIGR01993 Pyr-5-nucltdase pyri 99.6 1.1E-15 2.5E-20 125.0 5.9 92 10-107 82-184 (184)
119 PRK10748 flavin mononucleotide 99.6 2.3E-15 5E-20 128.3 7.1 94 163-263 111-210 (238)
120 PRK10748 flavin mononucleotide 99.6 1.3E-15 2.8E-20 129.9 5.5 94 8-110 109-210 (238)
121 TIGR01668 YqeG_hyp_ppase HAD s 99.6 1.2E-14 2.6E-19 117.5 8.8 98 10-112 41-140 (170)
122 PRK06698 bifunctional 5'-methy 99.6 8.2E-15 1.8E-19 136.4 8.6 98 9-111 327-430 (459)
123 PLN02919 haloacid dehalogenase 99.6 1E-14 2.2E-19 147.0 9.4 108 12-122 161-276 (1057)
124 KOG3085|consensus 99.5 1.2E-14 2.5E-19 121.5 7.5 100 9-112 110-217 (237)
125 TIGR01489 DKMTPPase-SF 2,3-dik 99.5 9.8E-15 2.1E-19 119.5 6.9 91 163-257 70-185 (188)
126 PRK09552 mtnX 2-hydroxy-3-keto 99.5 4.6E-15 9.9E-20 124.9 4.8 96 161-258 70-184 (219)
127 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 1.7E-14 3.8E-19 119.3 7.9 88 165-253 106-197 (197)
128 smart00577 CPDc catalytic doma 99.5 1.6E-14 3.5E-19 114.1 6.0 95 9-107 42-141 (148)
129 PRK05446 imidazole glycerol-ph 99.5 1E-13 2.2E-18 123.4 11.5 105 6-115 24-156 (354)
130 PRK13582 thrH phosphoserine ph 99.5 2.1E-14 4.7E-19 119.4 6.1 95 162-258 65-168 (205)
131 TIGR01549 HAD-SF-IA-v1 haloaci 99.5 3.4E-14 7.3E-19 112.8 7.0 90 7-101 59-154 (154)
132 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 2.1E-14 4.6E-19 110.6 5.3 85 12-99 29-126 (128)
133 KOG3109|consensus 99.5 1.6E-13 3.4E-18 111.2 9.2 95 164-261 99-205 (244)
134 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 6.3E-14 1.4E-18 116.0 7.0 86 12-100 106-197 (197)
135 KOG3085|consensus 99.5 9.6E-14 2.1E-18 116.0 7.7 101 163-265 111-217 (237)
136 KOG2914|consensus 99.5 6.3E-14 1.4E-18 116.6 6.0 101 6-109 86-197 (222)
137 COG0647 NagD Predicted sugar p 99.5 1.3E-12 2.8E-17 111.8 14.1 199 11-265 23-239 (269)
138 TIGR01664 DNA-3'-Pase DNA 3'-p 99.5 1E-13 2.2E-18 111.5 6.9 90 13-106 43-160 (166)
139 TIGR00338 serB phosphoserine p 99.5 1E-13 2.3E-18 116.4 6.8 99 7-106 80-193 (219)
140 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.5 6E-13 1.3E-17 113.7 11.4 127 126-276 8-150 (242)
141 PHA02597 30.2 hypothetical pro 99.4 1.3E-13 2.8E-18 114.1 6.3 99 9-111 71-177 (197)
142 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 7.2E-12 1.6E-16 107.5 16.6 198 12-265 17-227 (249)
143 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.4 3.6E-13 7.7E-18 111.5 7.8 101 9-110 77-192 (201)
144 PHA02530 pseT polynucleotide k 99.4 3E-13 6.5E-18 119.1 7.0 98 10-110 185-298 (300)
145 TIGR01663 PNK-3'Pase polynucle 99.4 1.3E-12 2.9E-17 121.7 9.4 116 126-255 168-305 (526)
146 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 2.3E-13 5E-18 110.3 3.8 83 163-253 88-175 (175)
147 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 1.7E-13 3.6E-18 111.1 2.8 81 10-100 88-175 (175)
148 cd01427 HAD_like Haloacid deha 99.4 1.5E-12 3.2E-17 100.1 7.9 96 9-107 21-139 (139)
149 TIGR01460 HAD-SF-IIA Haloacid 99.4 2.6E-12 5.6E-17 109.3 9.8 209 12-263 14-236 (236)
150 KOG3109|consensus 99.4 1.1E-12 2.4E-17 106.4 6.9 96 11-109 99-206 (244)
151 TIGR01488 HAD-SF-IB Haloacid D 99.4 4.2E-13 9.2E-18 108.8 4.5 91 162-253 70-177 (177)
152 TIGR01672 AphA HAD superfamily 99.4 1.2E-12 2.5E-17 110.8 7.1 97 7-111 109-214 (237)
153 TIGR03333 salvage_mtnX 2-hydro 99.4 6.1E-13 1.3E-17 111.6 5.2 92 163-255 68-177 (214)
154 PRK10444 UMP phosphatase; Prov 99.4 2.7E-11 5.9E-16 103.7 14.8 194 12-269 17-228 (248)
155 PTZ00445 p36-lilke protein; Pr 99.3 1.8E-12 3.9E-17 105.6 6.8 132 125-263 42-207 (219)
156 COG0560 SerB Phosphoserine pho 99.3 9.1E-13 2E-17 110.0 4.9 98 164-262 76-188 (212)
157 COG1778 Low specificity phosph 99.3 1.7E-12 3.6E-17 100.0 5.7 118 124-259 6-124 (170)
158 COG0241 HisB Histidinol phosph 99.3 5.8E-12 1.3E-16 101.2 8.9 124 126-264 5-152 (181)
159 COG2179 Predicted hydrolase of 99.3 4.3E-12 9.3E-17 98.9 7.6 91 12-109 46-139 (175)
160 TIGR02251 HIF-SF_euk Dullard-l 99.3 3.6E-12 7.9E-17 102.1 6.8 142 127-271 2-149 (162)
161 TIGR01670 YrbI-phosphatas 3-de 99.3 3.7E-12 8.1E-17 101.2 6.5 86 20-111 36-121 (154)
162 PRK11009 aphA acid phosphatase 99.3 5.9E-12 1.3E-16 106.4 7.7 97 8-112 110-215 (237)
163 TIGR02137 HSK-PSP phosphoserin 99.3 4.1E-12 8.8E-17 105.5 6.0 94 163-261 66-171 (203)
164 TIGR02726 phenyl_P_delta pheny 99.3 7.3E-12 1.6E-16 100.7 6.6 84 19-107 41-124 (169)
165 TIGR02244 HAD-IG-Ncltidse HAD 99.3 1.3E-11 2.9E-16 109.2 8.8 100 9-111 181-326 (343)
166 PLN02954 phosphoserine phospha 99.3 2.2E-11 4.8E-16 102.6 9.4 97 11-110 83-198 (224)
167 TIGR01686 FkbH FkbH-like domai 99.3 7.1E-12 1.5E-16 111.4 5.9 91 12-103 31-125 (320)
168 PRK11133 serB phosphoserine ph 99.3 6.7E-12 1.4E-16 111.1 5.6 99 7-106 176-289 (322)
169 KOG4549|consensus 99.2 6.5E-11 1.4E-15 87.5 9.3 121 125-246 4-134 (144)
170 KOG2882|consensus 99.2 1.1E-10 2.3E-15 99.6 11.7 214 11-265 37-273 (306)
171 PF00702 Hydrolase: haloacid d 99.2 1.9E-11 4E-16 101.9 7.2 89 163-254 125-215 (215)
172 PRK09552 mtnX 2-hydroxy-3-keto 99.2 1.3E-11 2.7E-16 104.0 5.6 94 7-102 69-181 (219)
173 TIGR01489 DKMTPPase-SF 2,3-dik 99.2 3.5E-11 7.5E-16 98.4 7.9 87 10-102 70-183 (188)
174 TIGR02244 HAD-IG-Ncltidse HAD 99.2 7.4E-11 1.6E-15 104.5 9.8 100 162-262 181-324 (343)
175 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.1 6.8E-11 1.5E-15 98.0 6.5 97 165-262 87-199 (202)
176 PRK09484 3-deoxy-D-manno-octul 99.1 7.4E-11 1.6E-15 96.5 6.3 82 19-105 55-136 (183)
177 PRK13582 thrH phosphoserine ph 99.1 1.1E-10 2.4E-15 96.9 7.2 95 9-105 65-168 (205)
178 PF00702 Hydrolase: haloacid d 99.1 1.1E-10 2.3E-15 97.3 6.8 89 10-101 125-215 (215)
179 PF09419 PGP_phosphatase: Mito 99.1 3.4E-10 7.4E-15 90.2 8.8 113 126-264 41-167 (168)
180 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.1 4.9E-11 1.1E-15 102.8 3.3 97 14-111 122-227 (257)
181 PRK08238 hypothetical protein; 99.1 2.7E-10 5.9E-15 105.8 8.4 96 162-264 69-168 (479)
182 TIGR01684 viral_ppase viral ph 99.1 2.9E-10 6.4E-15 97.6 7.6 106 120-246 120-262 (301)
183 TIGR01452 PGP_euk phosphoglyco 99.1 5.9E-11 1.3E-15 103.5 3.1 99 13-113 144-252 (279)
184 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.1 3.5E-10 7.6E-15 93.7 6.7 97 11-108 86-198 (202)
185 COG4229 Predicted enolase-phos 99.0 5.9E-10 1.3E-14 87.9 7.0 95 10-108 101-204 (229)
186 TIGR01544 HAD-SF-IE haloacid d 99.0 2.4E-09 5.1E-14 92.2 10.9 91 162-253 118-230 (277)
187 TIGR01533 lipo_e_P4 5'-nucleot 99.0 1.1E-09 2.3E-14 94.2 8.1 118 125-249 74-203 (266)
188 COG4996 Predicted phosphatase 99.0 1.4E-09 3.1E-14 81.2 7.5 111 1-112 30-147 (164)
189 PHA03398 viral phosphatase sup 99.0 9.6E-10 2.1E-14 94.5 7.5 104 122-246 124-264 (303)
190 TIGR01544 HAD-SF-IE haloacid d 99.0 3.9E-09 8.4E-14 90.9 10.8 124 9-137 118-267 (277)
191 TIGR02251 HIF-SF_euk Dullard-l 99.0 4.3E-10 9.3E-15 90.1 4.5 103 10-116 40-147 (162)
192 TIGR03333 salvage_mtnX 2-hydro 99.0 6.2E-10 1.3E-14 93.3 5.5 98 9-109 67-182 (214)
193 PF06888 Put_Phosphatase: Puta 99.0 5.7E-09 1.2E-13 87.9 10.3 107 162-269 68-205 (234)
194 PTZ00445 p36-lilke protein; Pr 99.0 1.2E-09 2.6E-14 89.2 5.9 98 13-110 76-207 (219)
195 TIGR01488 HAD-SF-IB Haloacid D 99.0 1.5E-09 3.3E-14 87.8 6.5 92 8-100 69-177 (177)
196 PF13242 Hydrolase_like: HAD-h 98.9 1.3E-09 2.8E-14 75.7 4.2 51 216-266 3-54 (75)
197 PF08645 PNK3P: Polynucleotide 98.9 1.2E-09 2.7E-14 87.0 4.6 121 127-258 1-153 (159)
198 COG0241 HisB Histidinol phosph 98.9 2E-09 4.3E-14 86.7 5.4 100 9-112 28-153 (181)
199 PLN02645 phosphoglycolate phos 98.9 7.3E-09 1.6E-13 91.8 8.8 106 126-259 28-136 (311)
200 TIGR02250 FCP1_euk FCP1-like p 98.9 1.2E-08 2.5E-13 81.1 8.9 118 127-246 7-139 (156)
201 TIGR01525 ATPase-IB_hvy heavy 98.9 5.5E-09 1.2E-13 99.6 8.1 86 163-255 382-468 (556)
202 PRK01158 phosphoglycolate phos 98.8 1.8E-08 3.9E-13 85.2 9.5 43 219-262 158-200 (230)
203 TIGR02137 HSK-PSP phosphoserin 98.8 1.4E-08 3E-13 84.3 8.2 97 10-111 66-174 (203)
204 TIGR01525 ATPase-IB_hvy heavy 98.8 5.3E-09 1.2E-13 99.8 6.2 86 10-102 382-468 (556)
205 PF13242 Hydrolase_like: HAD-h 98.8 5.5E-09 1.2E-13 72.5 4.4 51 64-114 4-55 (75)
206 TIGR01663 PNK-3'Pase polynucle 98.8 1.2E-08 2.6E-13 95.5 7.8 87 13-103 198-306 (526)
207 PRK10530 pyridoxal phosphate ( 98.8 2.1E-07 4.6E-12 80.6 14.9 102 166-270 138-248 (272)
208 TIGR01487 SPP-like sucrose-pho 98.8 2.3E-08 4.9E-13 83.8 8.5 110 127-259 2-188 (215)
209 KOG1615|consensus 98.8 3.1E-08 6.8E-13 79.2 8.3 88 162-252 85-191 (227)
210 COG4229 Predicted enolase-phos 98.8 1.2E-08 2.7E-13 80.6 5.9 98 163-261 101-204 (229)
211 TIGR01512 ATPase-IB2_Cd heavy 98.8 9.8E-09 2.1E-13 97.5 6.2 86 163-255 360-446 (536)
212 TIGR01456 CECR5 HAD-superfamil 98.7 4.3E-08 9.2E-13 87.2 9.2 87 12-106 16-109 (321)
213 COG3882 FkbH Predicted enzyme 98.7 6.1E-08 1.3E-12 87.5 9.9 135 126-269 222-361 (574)
214 TIGR01482 SPP-subfamily Sucros 98.7 4.5E-08 9.8E-13 82.4 8.8 44 218-262 149-192 (225)
215 KOG3040|consensus 98.7 2.2E-07 4.9E-12 75.2 12.0 192 12-264 23-229 (262)
216 TIGR01512 ATPase-IB2_Cd heavy 98.7 1.9E-08 4.1E-13 95.5 6.4 86 10-102 360-446 (536)
217 PRK08238 hypothetical protein; 98.7 4.4E-08 9.5E-13 91.2 7.9 94 9-111 69-168 (479)
218 TIGR01511 ATPase-IB1_Cu copper 98.7 9.5E-08 2.1E-12 91.2 9.4 85 164-256 404-488 (562)
219 COG0560 SerB Phosphoserine pho 98.6 3.4E-08 7.3E-13 82.5 4.7 99 11-110 76-189 (212)
220 TIGR01485 SPP_plant-cyano sucr 98.6 3.4E-07 7.3E-12 78.5 9.7 46 218-263 167-212 (249)
221 TIGR01511 ATPase-IB1_Cu copper 98.5 1.7E-07 3.6E-12 89.6 7.2 85 10-102 403-487 (562)
222 KOG3120|consensus 98.5 2.6E-07 5.6E-12 75.5 7.1 105 163-268 82-217 (256)
223 PF09419 PGP_phosphatase: Mito 98.5 3.2E-07 7E-12 73.2 7.4 96 10-111 57-167 (168)
224 PRK10671 copA copper exporting 98.5 2.6E-07 5.6E-12 92.3 8.3 91 165-263 650-740 (834)
225 PRK00192 mannosyl-3-phosphogly 98.5 9.5E-07 2E-11 76.8 10.2 84 175-260 142-233 (273)
226 PF13344 Hydrolase_6: Haloacid 98.5 3.3E-07 7.1E-12 67.4 5.3 56 129-207 1-58 (101)
227 PF03031 NIF: NLI interacting 98.4 2.9E-07 6.2E-12 73.4 4.8 127 127-259 1-131 (159)
228 PRK10671 copA copper exporting 98.3 6.4E-07 1.4E-11 89.5 6.1 89 11-107 649-737 (834)
229 KOG4549|consensus 98.3 3E-06 6.4E-11 63.1 7.9 88 6-93 38-134 (144)
230 TIGR02250 FCP1_euk FCP1-like p 98.3 1.3E-06 2.9E-11 69.3 6.6 85 9-96 55-142 (156)
231 PF08282 Hydrolase_3: haloacid 98.3 3E-06 6.6E-11 71.8 9.1 55 129-206 1-55 (254)
232 TIGR01484 HAD-SF-IIB HAD-super 98.3 2.5E-06 5.5E-11 70.7 8.2 41 218-258 163-203 (204)
233 TIGR01522 ATPase-IIA2_Ca golgi 98.3 1.7E-06 3.6E-11 86.9 8.3 91 165-256 528-639 (884)
234 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 2.8E-07 6.1E-12 79.0 2.0 99 12-113 121-228 (249)
235 PF06888 Put_Phosphatase: Puta 98.3 7.4E-06 1.6E-10 69.1 9.7 106 9-117 68-206 (234)
236 COG1778 Low specificity phosph 98.3 1.1E-06 2.4E-11 68.2 4.1 81 20-105 43-123 (170)
237 PRK00192 mannosyl-3-phosphogly 98.2 2.7E-06 5.9E-11 73.9 6.5 63 125-210 3-65 (273)
238 TIGR01533 lipo_e_P4 5'-nucleot 98.2 4.7E-06 1E-10 71.8 7.8 86 9-99 115-206 (266)
239 PF05761 5_nucleotid: 5' nucle 98.2 4E-06 8.8E-11 77.2 7.7 102 8-112 179-328 (448)
240 PF12710 HAD: haloacid dehalog 98.2 2.7E-06 5.9E-11 69.5 6.0 84 166-251 86-192 (192)
241 COG4087 Soluble P-type ATPase 98.2 1.5E-05 3.3E-10 59.9 9.2 100 163-268 28-127 (152)
242 KOG2630|consensus 98.2 5.4E-06 1.2E-10 68.3 7.2 98 7-109 118-225 (254)
243 smart00775 LNS2 LNS2 domain. T 98.2 1.2E-05 2.6E-10 64.0 8.7 117 129-257 2-142 (157)
244 PRK10530 pyridoxal phosphate ( 98.1 5.3E-06 1.2E-10 71.8 5.6 90 13-102 138-236 (272)
245 TIGR01684 viral_ppase viral ph 98.1 7.4E-06 1.6E-10 70.7 6.0 56 9-67 142-198 (301)
246 PRK12702 mannosyl-3-phosphogly 98.1 9E-06 2E-10 70.3 6.4 61 127-210 2-62 (302)
247 PRK11033 zntA zinc/cadmium/mer 98.1 1.5E-05 3.3E-10 78.6 8.8 84 165-257 568-651 (741)
248 TIGR01522 ATPase-IIA2_Ca golgi 98.1 1.5E-05 3.3E-10 80.2 8.8 90 12-102 528-638 (884)
249 PRK15126 thiamin pyrimidine py 98.0 9.4E-06 2E-10 70.4 6.4 62 125-209 1-62 (272)
250 PRK10187 trehalose-6-phosphate 98.0 2.7E-05 5.9E-10 67.4 9.2 42 222-263 178-222 (266)
251 PRK10444 UMP phosphatase; Prov 98.0 4E-06 8.6E-11 71.8 3.9 49 65-113 175-224 (248)
252 PHA03398 viral phosphatase sup 98.0 1.1E-05 2.4E-10 69.7 6.5 57 8-67 143-200 (303)
253 PF05761 5_nucleotid: 5' nucle 98.0 2E-05 4.3E-10 72.7 8.3 100 163-263 181-326 (448)
254 PRK11590 hypothetical protein; 98.0 1.9E-05 4.1E-10 66.0 7.6 91 11-105 94-200 (211)
255 PRK10976 putative hydrolase; P 98.0 1.5E-05 3.2E-10 68.9 6.5 60 126-208 2-61 (266)
256 TIGR01460 HAD-SF-IIA Haloacid 98.0 5.9E-06 1.3E-10 70.3 3.5 47 64-110 188-236 (236)
257 TIGR02461 osmo_MPG_phos mannos 98.0 1.8E-05 4E-10 66.8 6.4 58 128-209 1-58 (225)
258 PF03767 Acid_phosphat_B: HAD 97.9 1.8E-05 3.8E-10 67.0 5.9 131 125-262 71-223 (229)
259 COG0647 NagD Predicted sugar p 97.9 1.7E-05 3.7E-10 68.3 5.8 63 126-211 8-73 (269)
260 PF12710 HAD: haloacid dehalog 97.9 1.3E-05 2.8E-10 65.5 4.9 84 13-98 86-192 (192)
261 PRK11590 hypothetical protein; 97.9 9.3E-05 2E-09 61.8 9.9 95 164-259 94-201 (211)
262 TIGR02463 MPGP_rel mannosyl-3- 97.9 2.5E-05 5.5E-10 65.5 6.2 79 179-258 136-219 (221)
263 PRK10513 sugar phosphate phosp 97.9 3.5E-05 7.5E-10 66.7 7.2 59 126-207 3-61 (270)
264 COG0561 Cof Predicted hydrolas 97.9 3.3E-05 7.2E-10 66.7 6.5 60 125-207 2-61 (264)
265 PRK11033 zntA zinc/cadmium/mer 97.8 3E-05 6.5E-10 76.5 6.5 84 11-103 567-650 (741)
266 PF05152 DUF705: Protein of un 97.8 6.5E-05 1.4E-09 64.1 7.5 109 118-246 114-258 (297)
267 PF08645 PNK3P: Polynucleotide 97.8 3.1E-05 6.7E-10 61.8 5.3 96 8-103 24-151 (159)
268 TIGR01545 YfhB_g-proteo haloac 97.8 6.8E-05 1.5E-09 62.6 7.5 95 11-106 93-200 (210)
269 TIGR01675 plant-AP plant acid 97.8 8.3E-05 1.8E-09 62.5 7.6 132 127-263 78-224 (229)
270 COG4359 Uncharacterized conser 97.8 3.8E-05 8.3E-10 61.2 5.1 92 9-101 70-179 (220)
271 TIGR01116 ATPase-IIA1_Ca sarco 97.8 0.00011 2.3E-09 74.4 9.4 97 165-263 537-658 (917)
272 KOG3040|consensus 97.8 2.8E-05 6E-10 63.2 3.9 45 67-111 184-229 (262)
273 PRK03669 mannosyl-3-phosphogly 97.8 5.8E-05 1.3E-09 65.5 6.3 59 125-206 6-64 (271)
274 TIGR00099 Cof-subfamily Cof su 97.7 7.2E-05 1.6E-09 64.3 6.5 58 128-208 1-58 (256)
275 TIGR02245 HAD_IIID1 HAD-superf 97.7 0.00023 5E-09 58.5 8.7 104 127-247 22-142 (195)
276 TIGR00099 Cof-subfamily Cof su 97.7 0.0013 2.9E-08 56.4 13.7 42 218-259 188-229 (256)
277 TIGR01545 YfhB_g-proteo haloac 97.7 0.0004 8.8E-09 58.0 9.8 95 164-259 93-200 (210)
278 TIGR01689 EcbF-BcbF capsule bi 97.7 0.00025 5.5E-09 54.0 7.6 84 127-239 2-85 (126)
279 TIGR01486 HAD-SF-IIB-MPGP mann 97.6 0.00011 2.3E-09 63.3 6.2 57 128-207 1-57 (256)
280 COG4359 Uncharacterized conser 97.6 0.00018 3.9E-09 57.5 6.6 92 162-254 70-179 (220)
281 KOG1615|consensus 97.6 0.0004 8.7E-09 56.0 8.3 87 10-99 86-191 (227)
282 PF06941 NT5C: 5' nucleotidase 97.6 0.00019 4.2E-09 58.9 6.3 91 7-111 68-165 (191)
283 KOG2630|consensus 97.5 0.00029 6.2E-09 58.3 7.0 96 164-261 122-224 (254)
284 KOG3120|consensus 97.5 0.00025 5.4E-09 58.3 6.4 102 9-113 81-215 (256)
285 PLN02382 probable sucrose-phos 97.5 0.00053 1.2E-08 63.1 9.5 46 218-263 175-223 (413)
286 TIGR01497 kdpB K+-transporting 97.5 0.00029 6.4E-09 68.3 7.9 91 165-263 446-536 (675)
287 COG3700 AphA Acid phosphatase 97.4 4E-05 8.7E-10 60.8 0.8 93 164-261 113-211 (237)
288 COG2217 ZntA Cation transport 97.4 0.00027 5.8E-09 68.9 6.0 82 165-253 537-618 (713)
289 TIGR01680 Veg_Stor_Prot vegeta 97.4 0.0012 2.6E-08 56.6 8.9 131 127-263 102-251 (275)
290 COG0561 Cof Predicted hydrolas 97.4 0.0069 1.5E-07 52.2 13.8 42 13-55 21-62 (264)
291 PRK14502 bifunctional mannosyl 97.4 0.00041 8.9E-09 66.6 6.4 63 124-209 414-476 (694)
292 PTZ00174 phosphomannomutase; P 97.3 0.0004 8.7E-09 59.4 5.9 54 126-202 5-58 (247)
293 PLN02887 hydrolase family prot 97.3 0.00038 8.3E-09 66.5 6.2 59 125-206 307-365 (580)
294 TIGR01116 ATPase-IIA1_Ca sarco 97.3 0.0007 1.5E-08 68.6 8.3 97 12-110 537-658 (917)
295 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.00053 1.1E-08 57.5 6.3 75 28-105 138-219 (221)
296 PRK10513 sugar phosphate phosp 97.3 0.0043 9.3E-08 53.6 12.2 45 218-263 196-240 (270)
297 PRK01122 potassium-transportin 97.3 0.0011 2.4E-08 64.5 9.0 85 165-256 445-529 (679)
298 PRK14010 potassium-transportin 97.3 0.00091 2E-08 65.0 8.5 91 165-263 441-531 (673)
299 COG4087 Soluble P-type ATPase 97.3 0.003 6.6E-08 47.7 9.2 96 12-113 30-125 (152)
300 COG2503 Predicted secreted aci 97.3 0.0011 2.4E-08 55.3 7.4 120 125-251 78-210 (274)
301 KOG2470|consensus 97.2 0.00047 1E-08 60.4 4.4 97 11-110 239-377 (510)
302 PF03031 NIF: NLI interacting 97.2 0.00026 5.7E-09 56.2 2.7 88 10-101 34-126 (159)
303 TIGR01456 CECR5 HAD-superfamil 97.2 0.00053 1.2E-08 61.1 4.9 49 63-111 232-294 (321)
304 PF06189 5-nucleotidase: 5'-nu 97.2 0.0014 2.9E-08 55.6 6.8 209 27-265 35-262 (264)
305 TIGR01497 kdpB K+-transporting 97.1 0.00094 2E-08 64.9 6.1 88 12-106 446-533 (675)
306 PF13344 Hydrolase_6: Haloacid 97.1 0.00088 1.9E-08 49.1 4.5 73 11-89 13-88 (101)
307 KOG2882|consensus 97.1 0.00088 1.9E-08 57.8 5.1 45 69-113 229-274 (306)
308 COG2217 ZntA Cation transport 96.9 0.0015 3.2E-08 63.8 5.9 83 12-101 537-619 (713)
309 PF11019 DUF2608: Protein of u 96.9 0.0042 9E-08 53.3 8.0 97 166-263 82-211 (252)
310 PF06941 NT5C: 5' nucleotidase 96.9 0.00094 2E-08 54.8 3.7 88 162-263 70-164 (191)
311 TIGR01647 ATPase-IIIA_H plasma 96.9 0.0039 8.5E-08 61.9 8.5 97 165-263 442-562 (755)
312 TIGR01524 ATPase-IIIB_Mg magne 96.8 0.0044 9.6E-08 62.4 8.6 97 165-263 515-630 (867)
313 TIGR01487 SPP-like sucrose-pho 96.7 0.0025 5.5E-08 53.1 5.0 77 30-107 109-189 (215)
314 PF08235 LNS2: LNS2 (Lipin/Ned 96.7 0.0059 1.3E-07 48.2 6.6 115 129-256 2-141 (157)
315 PRK10517 magnesium-transportin 96.7 0.006 1.3E-07 61.7 8.3 91 165-256 550-659 (902)
316 TIGR01517 ATPase-IIB_Ca plasma 96.7 0.0062 1.3E-07 62.0 8.2 91 165-256 579-690 (941)
317 TIGR01658 EYA-cons_domain eyes 96.6 0.0058 1.2E-07 51.3 6.4 88 29-118 177-267 (274)
318 TIGR01482 SPP-subfamily Sucros 96.6 0.0052 1.1E-07 51.4 6.2 75 30-105 109-189 (225)
319 COG3769 Predicted hydrolase (H 96.5 0.0079 1.7E-07 49.7 6.2 59 124-206 5-63 (274)
320 PRK15122 magnesium-transportin 96.4 0.0094 2E-07 60.3 7.8 97 165-263 550-665 (903)
321 TIGR02471 sucr_syn_bact_C sucr 96.4 0.0044 9.6E-08 52.5 4.7 54 128-206 1-54 (236)
322 TIGR01523 ATPase-IID_K-Na pota 96.4 0.012 2.5E-07 60.6 8.2 92 165-257 646-768 (1053)
323 TIGR01675 plant-AP plant acid 96.4 0.017 3.7E-07 48.6 7.7 98 9-110 117-224 (229)
324 PRK14502 bifunctional mannosyl 96.3 0.14 3E-06 49.8 14.0 42 218-259 613-656 (694)
325 COG3882 FkbH Predicted enzyme 96.3 0.013 2.8E-07 53.8 6.7 90 12-102 255-348 (574)
326 PRK01122 potassium-transportin 96.2 0.014 3.1E-07 56.9 7.3 93 12-112 445-537 (679)
327 PRK14010 potassium-transportin 96.2 0.013 2.8E-07 57.2 6.9 93 12-112 441-533 (673)
328 PLN03017 trehalose-phosphatase 96.2 0.0099 2.1E-07 53.5 5.6 56 127-201 112-167 (366)
329 COG5663 Uncharacterized conser 96.1 0.0052 1.1E-07 48.5 3.1 99 164-272 71-172 (194)
330 TIGR02471 sucr_syn_bact_C sucr 96.1 0.0048 1E-07 52.3 3.1 45 217-262 158-202 (236)
331 PLN02423 phosphomannomutase 96.1 0.012 2.5E-07 50.4 5.5 53 126-202 6-59 (245)
332 KOG2470|consensus 96.1 0.0073 1.6E-07 53.1 4.2 94 167-261 242-375 (510)
333 TIGR01494 ATPase_P-type ATPase 96.1 0.018 4E-07 54.4 7.3 81 165-255 347-427 (499)
334 PF03767 Acid_phosphat_B: HAD 96.0 0.012 2.5E-07 49.9 5.2 93 11-109 114-223 (229)
335 TIGR01524 ATPase-IIIB_Mg magne 96.0 0.015 3.3E-07 58.7 6.6 91 12-106 515-627 (867)
336 KOG0207|consensus 96.0 0.02 4.3E-07 56.4 7.0 78 165-249 723-800 (951)
337 PF11019 DUF2608: Protein of u 96.0 0.03 6.5E-07 48.1 7.4 98 12-110 81-211 (252)
338 PLN02151 trehalose-phosphatase 96.0 0.013 2.8E-07 52.5 5.3 57 127-202 99-155 (354)
339 TIGR01658 EYA-cons_domain eyes 95.9 0.015 3.2E-07 48.9 5.0 88 184-272 178-268 (274)
340 TIGR01106 ATPase-IIC_X-K sodiu 95.8 0.033 7.1E-07 57.1 8.3 41 165-206 568-608 (997)
341 PLN02580 trehalose-phosphatase 95.7 0.019 4E-07 52.2 5.4 58 127-203 120-177 (384)
342 KOG0207|consensus 95.7 0.03 6.4E-07 55.2 7.0 82 12-100 723-804 (951)
343 KOG2961|consensus 95.6 0.14 2.9E-06 40.0 8.8 114 126-265 43-171 (190)
344 TIGR01647 ATPase-IIIA_H plasma 95.6 0.033 7.2E-07 55.4 7.0 95 12-111 442-563 (755)
345 PRK12702 mannosyl-3-phosphogly 95.6 0.093 2E-06 45.8 8.9 44 12-56 18-61 (302)
346 PRK14501 putative bifunctional 95.6 0.022 4.8E-07 56.5 5.7 61 127-205 493-554 (726)
347 PRK01158 phosphoglycolate phos 95.5 0.0096 2.1E-07 50.0 2.7 37 69-105 161-197 (230)
348 KOG1605|consensus 95.5 0.0089 1.9E-07 51.2 2.4 145 125-273 88-240 (262)
349 PRK15122 magnesium-transportin 95.5 0.023 5E-07 57.6 5.7 95 12-111 550-666 (903)
350 TIGR01486 HAD-SF-IIB-MPGP mann 95.5 0.024 5.1E-07 48.7 5.0 42 218-259 176-219 (256)
351 TIGR01485 SPP_plant-cyano sucr 95.4 0.02 4.3E-07 49.0 4.2 45 66-110 168-212 (249)
352 PRK10976 putative hydrolase; P 95.4 0.011 2.3E-07 51.0 2.5 45 218-263 190-234 (266)
353 TIGR00685 T6PP trehalose-phosp 95.3 0.018 3.9E-07 49.1 3.7 44 218-261 167-217 (244)
354 TIGR01517 ATPase-IIB_Ca plasma 95.3 0.054 1.2E-06 55.3 7.6 89 12-104 579-691 (941)
355 PRK10517 magnesium-transportin 95.2 0.047 1E-06 55.3 6.8 90 12-105 550-661 (902)
356 PF05822 UMPH-1: Pyrimidine 5' 95.1 0.066 1.4E-06 45.5 6.4 101 9-112 87-214 (246)
357 PLN02205 alpha,alpha-trehalose 95.0 0.044 9.6E-07 55.0 5.9 57 126-202 596-653 (854)
358 COG1877 OtsB Trehalose-6-phosp 94.9 0.055 1.2E-06 46.6 5.4 63 125-205 17-80 (266)
359 KOG2134|consensus 94.8 0.11 2.4E-06 46.6 7.1 109 127-245 76-202 (422)
360 TIGR01523 ATPase-IID_K-Na pota 94.8 0.096 2.1E-06 54.0 7.7 90 12-105 646-769 (1053)
361 COG5610 Predicted hydrolase (H 94.8 0.11 2.3E-06 47.6 7.1 97 11-109 96-203 (635)
362 PRK03669 mannosyl-3-phosphogly 94.7 0.049 1.1E-06 47.2 4.7 40 13-53 25-64 (271)
363 TIGR01657 P-ATPase-V P-type AT 94.7 0.12 2.6E-06 53.4 8.1 41 165-206 656-696 (1054)
364 KOG2961|consensus 94.6 0.23 5.1E-06 38.7 7.6 98 8-112 57-171 (190)
365 COG3700 AphA Acid phosphatase 94.6 0.028 6E-07 45.0 2.6 100 7-109 109-212 (237)
366 PF05822 UMPH-1: Pyrimidine 5' 94.5 0.065 1.4E-06 45.5 4.9 89 163-253 88-198 (246)
367 PRK15126 thiamin pyrimidine py 94.4 0.022 4.7E-07 49.3 1.9 44 218-262 188-231 (272)
368 COG4030 Uncharacterized protei 94.4 0.07 1.5E-06 44.4 4.7 41 163-205 81-121 (315)
369 COG0474 MgtA Cation transport 94.3 0.16 3.4E-06 51.7 8.0 96 165-261 547-665 (917)
370 PF05152 DUF705: Protein of un 94.3 0.12 2.5E-06 44.6 6.0 52 12-66 142-193 (297)
371 TIGR02245 HAD_IIID1 HAD-superf 94.3 0.21 4.5E-06 41.1 7.3 84 10-95 43-143 (195)
372 TIGR01106 ATPase-IIC_X-K sodiu 94.2 0.17 3.6E-06 52.1 7.9 41 12-53 568-608 (997)
373 PF02358 Trehalose_PPase: Treh 93.9 0.064 1.4E-06 45.4 3.7 55 130-202 1-56 (235)
374 TIGR01494 ATPase_P-type ATPase 93.9 0.19 4.1E-06 47.6 7.2 82 12-103 347-428 (499)
375 TIGR01484 HAD-SF-IIB HAD-super 93.9 0.036 7.8E-07 45.6 2.1 36 70-105 168-203 (204)
376 TIGR01680 Veg_Stor_Prot vegeta 93.7 0.3 6.6E-06 42.1 7.3 99 10-111 143-252 (275)
377 PF05116 S6PP: Sucrose-6F-phos 93.5 0.18 3.8E-06 43.2 5.6 76 170-263 133-209 (247)
378 TIGR02461 osmo_MPG_phos mannos 93.4 0.06 1.3E-06 45.4 2.6 41 13-54 16-56 (225)
379 PRK05752 uroporphyrinogen-III 93.4 0.61 1.3E-05 40.0 8.9 98 12-116 10-116 (255)
380 PRK08811 uroporphyrinogen-III 93.3 0.64 1.4E-05 40.3 8.9 223 12-278 25-261 (266)
381 COG2216 KdpB High-affinity K+ 93.2 0.36 7.8E-06 45.1 7.4 82 166-254 448-529 (681)
382 PLN02887 hydrolase family prot 93.1 0.069 1.5E-06 51.3 2.8 45 218-263 507-551 (580)
383 KOG3107|consensus 93.0 0.21 4.5E-06 44.7 5.4 93 181-275 370-465 (468)
384 KOG2469|consensus 92.9 0.29 6.2E-06 44.3 6.2 96 14-111 200-336 (424)
385 TIGR00685 T6PP trehalose-phosp 92.7 0.12 2.5E-06 44.2 3.5 40 69-108 171-217 (244)
386 COG0474 MgtA Cation transport 92.7 0.37 7.9E-06 49.2 7.5 96 11-110 546-667 (917)
387 PLN03063 alpha,alpha-trehalose 92.6 0.25 5.4E-06 49.5 6.0 63 127-204 508-571 (797)
388 KOG3107|consensus 92.4 0.36 7.7E-06 43.2 6.0 86 32-120 374-463 (468)
389 COG2503 Predicted secreted aci 92.4 0.68 1.5E-05 39.1 7.3 89 10-103 120-215 (274)
390 PF05116 S6PP: Sucrose-6F-phos 92.3 0.63 1.4E-05 39.8 7.5 44 66-110 166-209 (247)
391 PLN02382 probable sucrose-phos 92.2 0.46 1E-05 43.9 6.9 45 66-110 176-223 (413)
392 smart00775 LNS2 LNS2 domain. T 92.1 0.81 1.8E-05 36.2 7.4 37 12-49 27-66 (157)
393 COG4030 Uncharacterized protei 92.0 0.79 1.7E-05 38.4 7.2 40 11-52 82-121 (315)
394 COG4850 Uncharacterized conser 92.0 1.4 3.1E-05 38.8 9.0 112 128-247 163-291 (373)
395 KOG2469|consensus 91.9 0.56 1.2E-05 42.4 6.7 98 167-265 200-337 (424)
396 TIGR01652 ATPase-Plipid phosph 91.8 0.75 1.6E-05 47.8 8.5 41 165-206 631-671 (1057)
397 PLN03064 alpha,alpha-trehalose 91.7 0.38 8.2E-06 48.7 6.1 70 127-205 592-662 (934)
398 KOG0202|consensus 91.6 0.81 1.8E-05 45.2 7.9 91 165-256 584-699 (972)
399 PF08282 Hydrolase_3: haloacid 91.5 0.19 4.2E-06 42.1 3.4 36 70-105 191-226 (254)
400 COG0731 Fe-S oxidoreductases [ 91.0 0.53 1.1E-05 41.2 5.6 33 7-39 87-120 (296)
401 KOG0202|consensus 90.5 1.5 3.3E-05 43.4 8.6 93 12-105 584-701 (972)
402 KOG3189|consensus 90.2 0.94 2E-05 37.1 5.9 57 128-211 13-71 (252)
403 PRK05928 hemD uroporphyrinogen 88.7 1.1 2.5E-05 37.6 5.9 224 14-276 10-247 (249)
404 PF06189 5-nucleotidase: 5'-nu 88.7 0.7 1.5E-05 39.5 4.4 88 16-112 168-262 (264)
405 TIGR01657 P-ATPase-V P-type AT 88.7 1.4 3.1E-05 45.7 7.5 41 12-53 656-696 (1054)
406 COG0731 Fe-S oxidoreductases [ 88.3 1.4 3.1E-05 38.5 6.1 38 163-204 90-128 (296)
407 cd06578 HemD Uroporphyrinogen- 87.7 13 0.00028 30.8 11.6 215 13-271 6-237 (239)
408 COG5610 Predicted hydrolase (H 87.1 2.8 6.1E-05 38.8 7.4 97 164-260 96-201 (635)
409 TIGR01652 ATPase-Plipid phosph 86.5 2.9 6.2E-05 43.6 8.2 41 12-53 631-671 (1057)
410 KOG0323|consensus 86.0 2.4 5.3E-05 41.0 6.8 80 162-245 198-281 (635)
411 KOG0323|consensus 85.1 1.9 4.2E-05 41.7 5.7 87 9-99 198-288 (635)
412 PLN02423 phosphomannomutase 84.9 1.2 2.6E-05 38.0 3.9 41 218-263 189-233 (245)
413 KOG3128|consensus 84.8 2.3 4.9E-05 36.3 5.3 90 163-253 136-247 (298)
414 COG4850 Uncharacterized conser 83.8 4.8 0.0001 35.6 7.0 96 9-109 193-312 (373)
415 PRK12360 4-hydroxy-3-methylbut 83.2 31 0.00066 30.2 12.8 97 168-269 170-269 (281)
416 TIGR01689 EcbF-BcbF capsule bi 82.4 4.4 9.6E-05 30.8 5.7 29 11-39 23-51 (126)
417 COG0761 lytB 4-Hydroxy-3-methy 82.4 33 0.00072 29.9 13.8 91 167-268 170-271 (294)
418 PLN03190 aminophospholipid tra 81.9 4.5 9.7E-05 42.5 7.2 36 165-201 726-761 (1178)
419 COG5663 Uncharacterized conser 81.5 3.3 7.1E-05 33.1 4.7 92 12-112 72-165 (194)
420 KOG3128|consensus 81.1 3.3 7.1E-05 35.3 4.9 89 10-99 136-246 (298)
421 COG1587 HemD Uroporphyrinogen- 80.0 10 0.00023 32.2 7.9 97 13-115 9-111 (248)
422 PRK13762 tRNA-modifying enzyme 78.7 3 6.6E-05 37.2 4.3 36 9-44 139-174 (322)
423 PTZ00174 phosphomannomutase; P 78.7 4.4 9.5E-05 34.5 5.1 40 218-261 188-231 (247)
424 PRK07239 bifunctional uroporph 76.6 50 0.0011 30.0 11.7 225 16-276 21-275 (381)
425 TIGR02329 propionate_PrpR prop 76.2 12 0.00026 35.8 7.7 98 170-274 86-184 (526)
426 PF06437 ISN1: IMP-specific 5' 76.1 3 6.6E-05 37.6 3.4 48 126-193 147-194 (408)
427 COG2216 KdpB High-affinity K+ 75.2 13 0.00029 35.1 7.3 83 13-102 448-530 (681)
428 PF02606 LpxK: Tetraacyldisacc 74.7 9.6 0.00021 34.1 6.3 23 17-39 54-76 (326)
429 PRK10187 trehalose-6-phosphate 74.2 3.5 7.5E-05 35.6 3.3 40 70-109 179-221 (266)
430 PRK00087 4-hydroxy-3-methylbut 73.2 81 0.0018 31.1 12.8 96 168-268 167-265 (647)
431 TIGR03470 HpnH hopanoid biosyn 72.7 6.9 0.00015 34.8 4.9 28 163-190 82-109 (318)
432 KOG0209|consensus 72.4 12 0.00025 37.5 6.6 43 163-206 673-715 (1160)
433 PF02602 HEM4: Uroporphyrinoge 72.2 2 4.4E-05 35.8 1.4 96 19-117 2-108 (231)
434 TIGR02495 NrdG2 anaerobic ribo 71.5 18 0.00039 29.2 6.8 45 163-208 72-116 (191)
435 PRK13762 tRNA-modifying enzyme 71.4 8.4 0.00018 34.3 5.2 29 164-192 141-169 (322)
436 KOG1618|consensus 70.7 5.2 0.00011 35.4 3.5 100 128-259 37-144 (389)
437 TIGR02495 NrdG2 anaerobic ribo 70.6 8.9 0.00019 31.0 4.8 41 8-48 70-110 (191)
438 TIGR02826 RNR_activ_nrdG3 anae 70.3 6.1 0.00013 30.9 3.6 34 13-46 73-106 (147)
439 PLN02951 Molybderin biosynthes 69.3 13 0.00028 33.9 6.0 43 164-207 117-162 (373)
440 KOG1618|consensus 69.0 16 0.00034 32.4 6.1 87 12-106 51-144 (389)
441 PRK06975 bifunctional uroporph 68.9 84 0.0018 31.1 11.8 89 12-107 10-105 (656)
442 TIGR02329 propionate_PrpR prop 68.6 12 0.00026 35.8 5.8 88 16-110 85-172 (526)
443 PF02350 Epimerase_2: UDP-N-ac 67.4 24 0.00052 31.7 7.3 91 14-116 199-292 (346)
444 COG1519 KdtA 3-deoxy-D-manno-o 67.0 81 0.0018 29.1 10.4 86 17-109 65-154 (419)
445 TIGR00216 ispH_lytB (E)-4-hydr 67.0 87 0.0019 27.4 11.6 207 18-269 42-268 (280)
446 PF04413 Glycos_transf_N: 3-De 66.4 33 0.00072 27.8 7.3 87 16-110 36-127 (186)
447 PRK10076 pyruvate formate lyas 65.7 8.3 0.00018 32.2 3.7 31 9-39 47-78 (213)
448 PF02350 Epimerase_2: UDP-N-ac 65.6 33 0.00072 30.8 7.8 229 23-268 2-291 (346)
449 PRK13361 molybdenum cofactor b 65.1 18 0.0004 32.2 6.1 43 164-207 72-117 (329)
450 COG4502 5'(3')-deoxyribonucleo 64.8 16 0.00035 28.4 4.7 74 9-98 65-144 (180)
451 PF04413 Glycos_transf_N: 3-De 64.4 7.7 0.00017 31.6 3.2 71 19-94 109-184 (186)
452 cd06578 HemD Uroporphyrinogen- 63.5 18 0.0004 29.8 5.5 102 168-275 8-117 (239)
453 KOG2832|consensus 63.4 21 0.00046 32.1 5.9 79 164-245 213-294 (393)
454 cd05015 SIS_PGI_1 Phosphogluco 63.4 71 0.0015 25.0 9.1 88 176-264 44-140 (158)
455 TIGR03365 Bsubt_queE 7-cyano-7 63.3 7.3 0.00016 33.1 3.0 31 9-39 81-111 (238)
456 cd00733 GlyRS_alpha_core Class 63.3 10 0.00022 32.2 3.7 37 70-106 91-130 (279)
457 PRK09348 glyQ glycyl-tRNA synt 63.2 9.3 0.0002 32.6 3.5 37 70-106 95-134 (283)
458 KOG0204|consensus 63.1 45 0.00098 33.7 8.5 41 165-206 647-687 (1034)
459 PF06506 PrpR_N: Propionate ca 62.8 4.3 9.3E-05 32.7 1.4 93 12-111 58-153 (176)
460 COG5190 FCP1 TFIIF-interacting 62.4 22 0.00049 32.5 6.0 119 125-247 211-334 (390)
461 KOG4132|consensus 61.9 67 0.0015 27.1 8.1 107 169-278 143-256 (260)
462 TIGR00388 glyQ glycyl-tRNA syn 61.9 11 0.00024 32.3 3.7 37 70-106 92-131 (293)
463 PRK15424 propionate catabolism 61.8 18 0.00038 34.8 5.5 88 16-110 95-182 (538)
464 COG3769 Predicted hydrolase (H 61.7 13 0.00028 31.2 4.0 38 16-54 27-64 (274)
465 PRK15424 propionate catabolism 61.4 44 0.00096 32.1 8.1 87 170-263 96-182 (538)
466 PF04312 DUF460: Protein of un 61.2 23 0.0005 27.3 5.0 38 168-205 63-101 (138)
467 TIGR02668 moaA_archaeal probab 60.6 25 0.00054 30.8 6.0 102 166-278 69-175 (302)
468 cd04256 AAK_P5CS_ProBA AAK_P5C 60.6 26 0.00057 30.6 6.1 90 15-107 34-156 (284)
469 PF06506 PrpR_N: Propionate ca 59.9 7.9 0.00017 31.1 2.5 104 166-276 59-167 (176)
470 PF02571 CbiJ: Precorrin-6x re 58.0 34 0.00073 29.3 6.1 96 9-111 110-229 (249)
471 TIGR03677 rpl7ae 50S ribosomal 56.4 47 0.001 24.8 6.0 53 221-277 59-114 (117)
472 TIGR03679 arCOG00187 arCOG0018 56.1 93 0.002 25.9 8.4 97 174-270 14-128 (218)
473 PRK05301 pyrroloquinoline quin 55.4 28 0.00061 31.6 5.6 102 166-278 75-180 (378)
474 TIGR00715 precor6x_red precorr 54.6 64 0.0014 27.7 7.3 94 9-110 107-232 (256)
475 COG0378 HypB Ni2+-binding GTPa 54.2 61 0.0013 26.7 6.7 90 170-263 30-130 (202)
476 PRK00973 glucose-6-phosphate i 53.9 1.3E+02 0.0028 28.2 9.7 81 182-263 109-198 (446)
477 TIGR00236 wecB UDP-N-acetylglu 53.7 66 0.0014 28.7 7.7 89 17-110 16-119 (365)
478 COG2099 CobK Precorrin-6x redu 53.0 55 0.0012 28.1 6.4 95 8-110 108-231 (257)
479 KOG0204|consensus 52.6 70 0.0015 32.5 7.8 41 12-53 647-687 (1034)
480 TIGR02468 sucrsPsyn_pln sucros 52.6 61 0.0013 33.8 7.8 45 64-109 955-1002(1050)
481 PRK14501 putative bifunctional 52.5 12 0.00026 37.4 2.8 43 218-262 657-701 (726)
482 PF03332 PMM: Eukaryotic phosp 52.5 20 0.00043 30.0 3.7 39 17-57 1-39 (220)
483 TIGR02826 RNR_activ_nrdG3 anae 51.6 21 0.00045 27.9 3.6 25 166-190 73-97 (147)
484 COG2897 SseA Rhodanese-related 51.3 37 0.00081 29.7 5.4 53 218-271 73-131 (285)
485 KOG2116|consensus 50.9 20 0.00043 34.9 3.8 119 127-258 531-674 (738)
486 cd07043 STAS_anti-anti-sigma_f 50.4 29 0.00062 24.1 4.0 38 17-57 59-96 (99)
487 TIGR02666 moaA molybdenum cofa 50.2 29 0.00062 30.9 4.7 103 166-278 72-180 (334)
488 PF04007 DUF354: Protein of un 50.1 65 0.0014 28.9 6.9 85 17-110 16-112 (335)
489 TIGR00682 lpxK tetraacyldisacc 49.8 27 0.00059 30.9 4.4 23 17-39 47-69 (311)
490 TIGR02886 spore_II_AA anti-sig 49.5 31 0.00067 24.7 4.0 38 17-57 60-97 (106)
491 TIGR03278 methan_mark_10 putat 49.4 29 0.00063 32.0 4.7 32 7-38 81-113 (404)
492 TIGR00236 wecB UDP-N-acetylglu 49.2 86 0.0019 28.0 7.7 91 170-263 16-119 (365)
493 PRK05752 uroporphyrinogen-III 49.0 31 0.00068 29.3 4.6 21 166-186 11-31 (255)
494 cd05015 SIS_PGI_1 Phosphogluco 48.7 1.3E+02 0.0028 23.5 8.1 22 28-50 49-70 (158)
495 KOG2832|consensus 48.2 37 0.00081 30.6 4.9 77 11-90 213-292 (393)
496 PLN02334 ribulose-phosphate 3- 47.6 1.3E+02 0.0029 25.1 8.1 91 169-262 103-203 (229)
497 PRK11170 nagA N-acetylglucosam 47.5 1.3E+02 0.0029 27.4 8.7 43 16-58 176-220 (382)
498 COG0761 lytB 4-Hydroxy-3-methy 47.3 49 0.0011 28.9 5.3 97 14-115 170-271 (294)
499 PLN02951 Molybderin biosynthes 47.1 27 0.00058 31.8 4.1 83 9-103 115-200 (373)
500 TIGR03365 Bsubt_queE 7-cyano-7 47.0 17 0.00037 30.8 2.6 28 165-193 84-111 (238)
No 1
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.97 E-value=5e-31 Score=210.07 Aligned_cols=155 Identities=45% Similarity=0.793 Sum_probs=123.8
Q ss_pred cceeEEEecCCCCCCccccccc-CcccccC-C-eeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG-Q-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 201 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~ 201 (280)
.|++++||||+|||++|++.+. +||.... . .+.+..+..+.+||++.++|+.|+++|++++++|.++.++.++.+|+
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence 5899999999999999999999 9999887 4 79999999999999999999999999999999998768999999999
Q ss_pred hCCCc----------cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911 202 LINLN----------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK 271 (280)
Q Consensus 202 ~~gl~----------~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~ 271 (280)
.+++. ++|+..++++++|..+|..+.++.|+++++++||+|..++++.+++.|+.|++|++|.+++.|++
T Consensus 82 ~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~ 161 (169)
T PF12689_consen 82 LLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER 161 (169)
T ss_dssp HTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred hcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q psy8911 272 GLKQWASK 279 (280)
Q Consensus 272 ~~~~~~~~ 279 (280)
+|+.|+++
T Consensus 162 gL~~~~~k 169 (169)
T PF12689_consen 162 GLEKFRKK 169 (169)
T ss_dssp HHHHHHH-
T ss_pred HHHHHhhC
Confidence 99999975
No 2
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.95 E-value=2.6e-27 Score=190.51 Aligned_cols=154 Identities=27% Similarity=0.431 Sum_probs=131.9
Q ss_pred cceeEEEecCCCCCCccccccc-CcccccC---CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG---QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 200 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l 200 (280)
+|++++||+|+|||+..+.+.. +|+.... +.+.+.....+.+|||+.++|+.|+++|++++|+||+.....++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH
Confidence 4789999999999999999988 7777433 56888999999999999999999999999999999874567788899
Q ss_pred hhCCCc---------cccccceEecCC-CHHH----HHHHHHHc--CCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911 201 NLINLN---------QYFSNKEIYPGP-KTTH----FESLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 201 ~~~gl~---------~~f~~~~~~~~~-k~~~----~~~~~~~~--~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
+.+++. +||+.+.+...+ ++.+ +..+.+++ |++|++|+||||++.|+++|+++|+.++++++|.
T Consensus 81 ~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 81 GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 999998 999987655442 2222 34444444 6999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHh
Q psy8911 265 SHAVLQKGLKQWAS 278 (280)
Q Consensus 265 ~~~~~~~~~~~~~~ 278 (280)
....+.+.++.||+
T Consensus 161 ~~~~~~~~~~~~~~ 174 (174)
T TIGR01685 161 DKGTFKKILEMWRS 174 (174)
T ss_pred cHHHHHHHHHHhcC
Confidence 99999999999984
No 3
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.90 E-value=2.6e-23 Score=177.70 Aligned_cols=206 Identities=12% Similarity=0.026 Sum_probs=157.1
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHH--HHHhhcCccc-cccccceecCCChh--HHHHHHHHhCCCCccE
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ--QLLDLFNWNQ-YFDHKQIFPGQKTT--HFANLKKATGIEYKDM 84 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~--~~l~~~~l~~-~fd~~~i~~~~~~~--~~~~~~~~~g~~p~~~ 84 (280)
...+|||+.++|++|+++|++++++||+++ ...+ ..++.+|+.. +|+ .|+++.... .++.+++++|++|++|
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L~~~gl~~~~~~--~Ii~s~~~~~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTLKSLGINADLPE--MIISSGEIAVQMILESKKRFDIRNGII 98 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHHHHCCCCccccc--eEEccHHHHHHHHHhhhhhccCCCceE
Confidence 457899999999999999999999999988 6665 6889999987 999 888887643 3777778899999999
Q ss_pred EEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee
Q psy8911 85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI 164 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (280)
++|||+..|++....+|... .... .+ +..++...| .. ..
T Consensus 99 ~~vGd~~~d~~~~~~~~~~~---~~~~---------~~---~~~vvv~~~-------------------------~~-~~ 137 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYTTD---DENK---------AN---ASLITIYRS-------------------------EN-EK 137 (242)
T ss_pred EEeCCcccchhhhcCCCccc---cCCc---------cc---CcEEEEcCC-------------------------Cc-cc
Confidence 99999988877665444310 0000 00 111221111 00 01
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-------eEecCCCHHHHHHHHHHcCCC-CCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------EIYPGPKTTHFESLKKATGIE-YKD 236 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-------~~~~~~k~~~~~~~~~~~~~~-~~~ 236 (280)
.-|+++.++++.|+++|+++ |+||+ ........+.+++...+|..+ ....+|++..|+.++++++.. +++
T Consensus 138 ~~~~~~~~~l~~l~~~g~~~-i~tN~-d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 138 LDLDEFDELFAPIVARKIPN-ICANP-DRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred CCHHHHHHHHHHHHhCCCcE-EEECC-CEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence 13689999999999999997 88999 676666667788877777643 123458889999999999975 679
Q ss_pred EEEEeCC-cCCcccccccCceEEEEC
Q psy8911 237 MVFFDDE-ERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 237 ~l~igD~-~~di~~a~~aG~~~i~v~ 261 (280)
|+||||+ .+|+.+|+++|+.+++|.
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999999 599999999999999985
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.89 E-value=3.6e-23 Score=177.41 Aligned_cols=108 Identities=13% Similarity=0.234 Sum_probs=97.5
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+.. +|+|+.|..+++++|++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNA-PRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 35789999999999999999999999999 8999999999999999999865543 47789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ 270 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~ 270 (280)
|+||||++.|+++|+++|+.+|+|.+|.+.+.+.
T Consensus 184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~ 217 (248)
T PLN02770 184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLM 217 (248)
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHh
Confidence 9999999999999999999999999886655443
No 5
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.88 E-value=7.7e-23 Score=173.34 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=93.2
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~ 236 (280)
....++||+.++|+.|+++|++++|+||+ ....+...++++|+.++|+.+.... +|+|+.|..+++++|++|++
T Consensus 92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 92 TQSQLFDGVEGMLQRLECAGCVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred hcCeeCCCHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 34689999999999999999999999999 8888888999999999998754322 47789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
|+||||+.+|+++|+++|+.+|+|.+|..
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 199 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPSVAALWGYR 199 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence 99999999999999999999999998763
No 6
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.87 E-value=2.9e-22 Score=168.07 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=95.9
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ ....+...++.+|+.+||+.+... .+|+++.|..++++++++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTK-MRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 35679999999999999999999999999 888999999999999999976443 247889999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCC-HHHH
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS-HAVL 269 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~-~~~~ 269 (280)
|+||||+.+|+++|+++|+++++|.+|.. ..++
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l 191 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYL 191 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHH
Confidence 99999999999999999999999998863 4444
No 7
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.86 E-value=2.8e-22 Score=168.91 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=93.2
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV 238 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l 238 (280)
..+|||+.++|..|+++|++++|+||+ ....++..++++|+.+||+.+..+. +|+|..+..+++++|++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k-~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNK-PERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 579999999999999999999999999 8999999999999999999765422 3667889999999999999999
Q ss_pred EEeCCcCCcccccccCceEEEECCCCC
Q psy8911 239 FFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 239 ~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
||||+.+|+++|++||+.+++|.+|+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 999999999999999999999999874
No 8
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.86 E-value=3.2e-22 Score=168.91 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=91.8
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ .+..++..++++|+.+||+.+.++. +|+|+.|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 44789999999999999999999999999 8888999999999999999764432 47778999999999999999
Q ss_pred EEEEeCCcCCcccccccCce-EEEECCCCC
Q psy8911 237 MVFFDDEERNSHDVSPLGVT-CIHVKKGMS 265 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~-~i~v~~g~~ 265 (280)
|+||||++.|+++|+++||+ +++|+++.+
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 99999999999999999997 577876653
No 9
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.85 E-value=1.5e-21 Score=154.15 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=99.4
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------------
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 193 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~------------- 193 (280)
+.++||+||||.+.....+ ......++++||+.++|+.|+++|++++|+||+ ..
T Consensus 1 ~~~~~d~dgtl~~~~~~~~------------~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~-~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDY------------PRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQ-SGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCccc------------CCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCC-CcccCCcCCHHHHHH
Confidence 3678999999987433211 123345689999999999999999999999998 52
Q ss_pred --HHHHHHHhhCCCcc--ccccce------EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 194 --LHAKQILNLINLNQ--YFSNKE------IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 194 --~~~~~~l~~~gl~~--~f~~~~------~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
..+...++++|+.. +|.... ...+|++++|+.++++++++|++|+||||+..|+++|+++||++|+++.|
T Consensus 68 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 68 PNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 46677889999872 222110 11358889999999999999999999999999999999999999999865
No 10
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.85 E-value=7.2e-22 Score=166.30 Aligned_cols=104 Identities=21% Similarity=0.250 Sum_probs=95.0
Q ss_pred CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911 161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~ 235 (280)
...++++||+.++|+.|+++|++++++|++ ++..++..|+.+|+.+||+.++.. ++|.|+.|+.+++++|++|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s-~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSS-PRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCC-hHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 345789999999999999999999999999 888999999999999999975432 35888999999999999999
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+||.|+|++.++++|++|||.++.++.+.+
T Consensus 161 ~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 161 ECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred HeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 999999999999999999999999997554
No 11
>PRK11587 putative phosphatase; Provisional
Probab=99.85 E-value=1.2e-21 Score=164.91 Aligned_cols=103 Identities=14% Similarity=0.031 Sum_probs=89.2
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ ....+...++..++. +|+.+.+. .+|+|+.|..+++++|++|++
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~-~~~~~~~~l~~~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSG-SVPVASARHKAAGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCC-CchHHHHHHHhcCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 45789999999999999999999999999 777778888889984 55544332 247789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSH 266 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~ 266 (280)
|+||||+..|+++|+++||.+|+|+++...
T Consensus 158 ~l~igDs~~di~aA~~aG~~~i~v~~~~~~ 187 (218)
T PRK11587 158 CVVVEDAPAGVLSGLAAGCHVIAVNAPADT 187 (218)
T ss_pred EEEEecchhhhHHHHHCCCEEEEECCCCch
Confidence 999999999999999999999999877543
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.85 E-value=1.2e-21 Score=168.55 Aligned_cols=99 Identities=16% Similarity=0.234 Sum_probs=91.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.++. +|+|+.|..+++++|++|++|
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 4678999999999999999999999999 8899999999999999999865433 477899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
+||||+..|+++|+++||.+|+|..
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEec
Confidence 9999999999999999999999973
No 13
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.85 E-value=1.2e-21 Score=169.66 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=94.1
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC--CCHHHHHHHHHHcCCCCCcEEE
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVF 239 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~ 239 (280)
..++++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+... +|++.+..++++++++|++|+|
T Consensus 139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~-~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~ 217 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRSLCLGILSSN-SRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMY 217 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEE
Confidence 45688999999999999999999999999 89999999999999999997644332 5788899999999999999999
Q ss_pred EeCCcCCcccccccCceEEEECCCCC
Q psy8911 240 FDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 240 igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
|||+..|+++|+++||.+|+|.+|..
T Consensus 218 IGDs~~Di~aA~~AG~~~I~v~~g~~ 243 (273)
T PRK13225 218 VGDETRDVEAARQVGLIAVAVTWGFN 243 (273)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999998864
No 14
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.85 E-value=1e-21 Score=165.70 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=94.0
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ ....++..++.+++.++|+.+.+. .+|++++|+.+++++|++|++
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQGLKIGLASAS-PLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLT 167 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 35689999999999999999999999999 889999999999999999976543 347789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
|+||||+.+|+++|+++|+++|+++.+..
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~ 196 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPAPEQ 196 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecCCcc
Confidence 99999999999999999999999987653
No 15
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.85 E-value=4.4e-21 Score=161.50 Aligned_cols=102 Identities=18% Similarity=0.309 Sum_probs=92.7
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++|++++|+||+ ....+...++++|+.+||+.+.+.+ +|+++.|..+++++|++|++|
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDG-LPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCC-chHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3579999999999999999999999999 8888889999999999999765432 477899999999999999999
Q ss_pred EEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911 238 VFFDDEE-RNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 238 l~igD~~-~di~~a~~aG~~~i~v~~g~~ 265 (280)
+||||++ +|+++|+++|+.+|++.++..
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i~~~~~~~ 199 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTVWINQGKS 199 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence 9999998 899999999999999987754
No 16
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.85 E-value=1.7e-21 Score=163.02 Aligned_cols=102 Identities=19% Similarity=0.273 Sum_probs=93.5
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+.... +|+|+.|..+++++|++|++|
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNK-PTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 4689999999999999999999999999 8889999999999999999754432 477899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+||||+.+|+++|+++|+++++|.+|..
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v~~g~~ 189 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLLTYGYR 189 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence 9999999999999999999999988764
No 17
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.85 E-value=1.7e-21 Score=173.96 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=95.5
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
...++||+.++|+.|+++|++++|+||+ .+..++..++++||.+||+.+.... +|++++|..+++++|++|++|
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~-~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peec 292 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTR-PRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERC 292 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 4678999999999999999999999999 8999999999999999999865433 477899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCCHHH
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAV 268 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~ 268 (280)
+||||+..|+++|+++||++|+|.++.....
T Consensus 293 l~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~ 323 (381)
T PLN02575 293 IVFGNSNQTVEAAHDARMKCVAVASKHPIYE 323 (381)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCChhH
Confidence 9999999999999999999999987654444
No 18
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.84 E-value=6.1e-21 Score=147.97 Aligned_cols=120 Identities=19% Similarity=0.112 Sum_probs=97.9
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--------HHHHHH
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--------ILHAKQ 198 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--------~~~~~~ 198 (280)
+++.||+||||++.... ........++||+.++|+.|+++|++++|+||+ . ...++.
T Consensus 1 k~~~~D~dgtL~~~~~~--------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~-~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQ-SGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECC-ccccccHHHHHHHHH
Confidence 46899999999962100 112234679999999999999999999999999 7 677888
Q ss_pred HHhhCCCccccccceE-ecCCCHHHHHHHHHHc-CCCCCcEEEEeC-CcCCcccccccCceEEEEC
Q psy8911 199 ILNLINLNQYFSNKEI-YPGPKTTHFESLKKAT-GIEYKDMVFFDD-EERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 199 ~l~~~gl~~~f~~~~~-~~~~k~~~~~~~~~~~-~~~~~~~l~igD-~~~di~~a~~aG~~~i~v~ 261 (280)
.++.+++..+|..... ..+|+++.|..+++++ +++|++++|||| +..|+.+|+++|+.+|+++
T Consensus 66 ~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 66 RLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred HHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 9999999744432111 2368889999999999 599999999999 7999999999999999985
No 19
>PRK06769 hypothetical protein; Validated
Probab=99.84 E-value=1e-20 Score=153.37 Aligned_cols=125 Identities=13% Similarity=0.066 Sum_probs=101.1
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH--------HHH
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL--------HAK 197 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~--------~~~ 197 (280)
.+.+.+|.||||-..... .+...+.+|||+.++|++|+++|++++|+||+ ... ...
T Consensus 4 ~~~~~~d~d~~~~~~~~~---------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~-~~~~~~~~~~~~~~ 67 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTI---------------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQ-PGIADGIATIADFV 67 (173)
T ss_pred CcEEEEeCCCcccCCCCC---------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECC-chhcCCcCCHHHHH
Confidence 368899999999431000 12245789999999999999999999999998 531 234
Q ss_pred HHHhhCCCccccccceE------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911 198 QILNLINLNQYFSNKEI------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH 266 (280)
Q Consensus 198 ~~l~~~gl~~~f~~~~~------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~ 266 (280)
..++.+|+.++|..... ..+|+++.|.+++++++++|++|+||||++.|+++|+++|+++|+|.+|...
T Consensus 68 ~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 68 QELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred HHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 45888999888764321 2368889999999999999999999999999999999999999999987643
No 20
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.83 E-value=1e-20 Score=159.20 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=94.3
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccceEec-----CCCHHHHHHHHHHcCCC-C
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEIYP-----GPKTTHFESLKKATGIE-Y 234 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~~~~-----~~k~~~~~~~~~~~~~~-~ 234 (280)
...++||+.++|+.|+++|++++|+||+ ....++..++++|+. +||+.+.+.. +|+|+.|..++++++++ |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~-~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGF-DRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCC-chHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 4579999999999999999999999999 899999999999999 9999764432 37889999999999997 7
Q ss_pred CcEEEEeCCcCCcccccccCceE-EEECCCC-CHHHH
Q psy8911 235 KDMVFFDDEERNSHDVSPLGVTC-IHVKKGM-SHAVL 269 (280)
Q Consensus 235 ~~~l~igD~~~di~~a~~aG~~~-i~v~~g~-~~~~~ 269 (280)
++|+||||++.|+++|+++||.+ +++.+|. +...+
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~ 200 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEEL 200 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHH
Confidence 99999999999999999999999 9998876 33334
No 21
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.83 E-value=4.3e-20 Score=150.97 Aligned_cols=127 Identities=15% Similarity=0.023 Sum_probs=100.0
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-----------
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI----------- 193 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~----------- 193 (280)
|.|.+.||+||||.-.. . .+......+.++||+.++|++|+++|++++|+||+ ..
T Consensus 2 ~~~~~~~d~~~t~~~~~-~------------~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~-~~~~~~~~~~~~~ 67 (181)
T PRK08942 2 SMKAIFLDRDGVINVDS-D------------GYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQ-SGIARGLFTEAQL 67 (181)
T ss_pred CccEEEEECCCCcccCC-c------------cccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCC-ccccCCcCCHHHH
Confidence 56899999999985321 1 11233446789999999999999999999999999 52
Q ss_pred ----HHHHHHHhhCCCccccccceE----------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 194 ----LHAKQILNLINLNQYFSNKEI----------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 194 ----~~~~~~l~~~gl~~~f~~~~~----------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
......++++|+ +|+.+.. ..+|++..|..+++++|++|++|+||||+.+|+++|+++|+.+++
T Consensus 68 ~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~ 145 (181)
T PRK08942 68 NALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVL 145 (181)
T ss_pred HHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence 334456777776 2443211 235788999999999999999999999999999999999999999
Q ss_pred ECCCCCHH
Q psy8911 260 VKKGMSHA 267 (280)
Q Consensus 260 v~~g~~~~ 267 (280)
+.+|....
T Consensus 146 v~~g~~~~ 153 (181)
T PRK08942 146 VRTGKGVT 153 (181)
T ss_pred EcCCCCch
Confidence 99886543
No 22
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.82 E-value=3.8e-20 Score=150.58 Aligned_cols=122 Identities=15% Similarity=0.079 Sum_probs=96.2
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------------
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 193 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~------------- 193 (280)
+++.||.||||...... ......+.++||+.++|++|+++|++++|+||+ ..
T Consensus 2 ~~~~~D~Dgtl~~~~~~--------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~-~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGY--------------VHEIDNFEFIDGVIDALRELKKMGYALVLVTNQ-SGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCCCC--------------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCC-ccccCCcCCHHHHHH
Confidence 57889999999742110 022346789999999999999999999999999 53
Q ss_pred --HHHHHHHhhCCCccccccceE----------------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCc
Q psy8911 194 --LHAKQILNLINLNQYFSNKEI----------------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 255 (280)
Q Consensus 194 --~~~~~~l~~~gl~~~f~~~~~----------------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~ 255 (280)
......++.+++. |+.+.. ..+|++++|..++++++++|++|+||||+.+|+++|+++|+
T Consensus 67 ~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~ 144 (176)
T TIGR00213 67 LTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV 144 (176)
T ss_pred HHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence 3444567766665 332111 13588899999999999999999999999999999999999
Q ss_pred eE-EEECCCCC
Q psy8911 256 TC-IHVKKGMS 265 (280)
Q Consensus 256 ~~-i~v~~g~~ 265 (280)
.+ ++|.+|..
T Consensus 145 ~~~i~v~~g~~ 155 (176)
T TIGR00213 145 KTNVLVRTGKP 155 (176)
T ss_pred cEEEEEecCCc
Confidence 98 79988864
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.82 E-value=1.4e-20 Score=163.31 Aligned_cols=102 Identities=20% Similarity=0.331 Sum_probs=92.3
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
...++||+.++|+.|+++|++++|+||+ ....++..++++++..||+.+.... +|+++.|+.+++++|++|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~-~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNK-PERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECC-cHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 3568999999999999999999999999 8888899999999999999754432 467788999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+||||+.+|+++|+++||++++|.+|+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~ 205 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYN 205 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCC
Confidence 9999999999999999999999998763
No 24
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.82 E-value=8.7e-20 Score=145.84 Aligned_cols=132 Identities=18% Similarity=0.147 Sum_probs=105.0
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------c
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------E 192 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--------------~ 192 (280)
+.+.||.||||++..... ........+.+|||+.++|++|+++|++++|+||+. .
T Consensus 2 ~~~~~d~dg~l~~~~~~~-----------~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~ 70 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD-----------FQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGP 70 (161)
T ss_pred CEEEEeCCCCccccCCCc-----------cccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHH
Confidence 567899999998632111 111233467899999999999999999999999962 2
Q ss_pred HHHHHHHHhhCCCccccccceEe----------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 193 ILHAKQILNLINLNQYFSNKEIY----------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 193 ~~~~~~~l~~~gl~~~f~~~~~~----------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
...+...++++|+. |+.+.++ .+|+++.+..++++++++|++|+||||+..|+++|+++|+++++++.
T Consensus 71 ~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 71 HNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence 44678889999997 6533221 14788999999999999999999999999999999999999999986
Q ss_pred C-CCHHHHHH
Q psy8911 263 G-MSHAVLQK 271 (280)
Q Consensus 263 g-~~~~~~~~ 271 (280)
+ .+|+...+
T Consensus 149 ~~~~~~~~~~ 158 (161)
T TIGR01261 149 EELNWDMIAE 158 (161)
T ss_pred hhcCHHHHHH
Confidence 4 57877543
No 25
>PLN02940 riboflavin kinase
Probab=99.82 E-value=1.1e-20 Score=171.10 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=92.8
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh-hCCCccccccceEec-----CCCHHHHHHHHHHcCCCCC
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN-LINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~-~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~ 235 (280)
..+.++||+.++|+.|+++|++++|+||+ ....++..++ ++|+.+||+.+.+.+ +|+++.|..+++++|++|+
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~-~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNS-PRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCC-cHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 35679999999999999999999999999 8888888887 799999999865432 4778999999999999999
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+|+||||+..|+++|+++||.+|+|+++..
T Consensus 169 ~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~ 198 (382)
T PLN02940 169 NCLVIEDSLPGVMAGKAAGMEVIAVPSIPK 198 (382)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence 999999999999999999999999998653
No 26
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.81 E-value=5.8e-20 Score=141.59 Aligned_cols=116 Identities=24% Similarity=0.327 Sum_probs=93.1
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC--
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN-- 204 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g-- 204 (280)
++++||+|||||+........ ..+.+.. ++|||+.++|+.|+++|++++|+||++.+..+...+++++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~------~~~~~~~----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~ 70 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE------DPIIDLE----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF 70 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC------CcchhhH----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc
Confidence 468999999999864321100 0000000 6899999999999999999999999955777888899998
Q ss_pred -----CccccccceEe-cCCCHHHHHHHHHHcC--CCCCcEEEEeCCcCCcccccc
Q psy8911 205 -----LNQYFSNKEIY-PGPKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSP 252 (280)
Q Consensus 205 -----l~~~f~~~~~~-~~~k~~~~~~~~~~~~--~~~~~~l~igD~~~di~~a~~ 252 (280)
+.++|+.+.++ ..|++++|..+++++| ++|++|+||||++.|+++.++
T Consensus 71 ~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 71 GIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 89999976554 4588999999999999 999999999999999887664
No 27
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.80 E-value=2.7e-19 Score=155.99 Aligned_cols=225 Identities=15% Similarity=0.120 Sum_probs=146.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDD 89 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D 89 (280)
.++||+.++|+.|+++|++++++||++.. ......++.+|+..-.+ .++++... ....+++.+..+..++++|+
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~ts~~~--~~~~l~~~~~~~~~v~~iG~ 93 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFSSALC--AARLLRQPPDAPKAVYVIGE 93 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEecHHHH--HHHHHHhhCcCCCEEEEEcC
Confidence 58999999999999999999999997641 22224567778754444 66665544 22333343344577999998
Q ss_pred CcccccccccCCCeEEEEcCCCchhhhhcc---ccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911 90 EERNSHDVSPLGVTCILVEDGMTNAITLYG---RSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY 166 (280)
Q Consensus 90 ~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~---~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (280)
.. -.+..+..|+..+.-............ .....-+..++...| . --.
T Consensus 94 ~~-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d---------------------------~-~~~ 144 (279)
T TIGR01452 94 EG-LRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYD---------------------------E-HFS 144 (279)
T ss_pred HH-HHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecC---------------------------C-CCC
Confidence 52 234456678775532211110000000 000000111122111 1 234
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCCcHHHH-HHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCCcE
Q psy8911 167 YRGVPEILRYLKENKCLVAAASRTSEILHA-KQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~-~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
|+++.++++.|+++|+ ++|+||+ ..... ...+...++..+|+.+. ...+|.+..|..++++++++|++|
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~-d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNR-DPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCC-CCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 8999999999999987 8999999 54332 22334556667766431 123578889999999999999999
Q ss_pred EEEeCCc-CCcccccccCceEEEECCCCC-HHHHHH
Q psy8911 238 VFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVLQK 271 (280)
Q Consensus 238 l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~~~ 271 (280)
+||||++ .||++|+++||++++|.+|.. ..+++.
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~ 258 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQE 258 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHh
Confidence 9999995 899999999999999999974 555543
No 28
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.80 E-value=1.5e-19 Score=145.56 Aligned_cols=118 Identities=23% Similarity=0.346 Sum_probs=99.2
Q ss_pred ccccCCCcceecCCHHHHHHHHHHCCceEEEecCC-CchHHHHHHHhhcCcc---------ccccccceecCCChhH---
Q psy8911 3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRT-SEIQGAQQLLDLFNWN---------QYFDHKQIFPGQKTTH--- 69 (280)
Q Consensus 3 ~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~~~~~~~l~~~~l~---------~~fd~~~i~~~~~~~~--- 69 (280)
+.+.....+.+|||+.++|+.|+++|++++|+||+ +. ..++..++.+++. ++|+ .++++++...
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~-~~~~~~L~~~~l~~~~~~~~~~~~Fd--~iv~~~~~~~~kp 112 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVP-EWAYEILGTFEITYAGKTVPMHSLFD--DRIEIYKPNKAKQ 112 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCCh-HHHHHHHHhCCcCCCCCcccHHHhce--eeeeccCCchHHH
Confidence 56778888999999999999999999999999999 77 8889999999998 9999 7776654322
Q ss_pred ----HHHHHHHh--CCCCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhcccccc
Q psy8911 70 ----FANLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVF 123 (280)
Q Consensus 70 ----~~~~~~~~--g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~ 123 (280)
++.+.+.+ |++|++|+||||++.|+++|+++|+.+++++++.....+.+.+.+|
T Consensus 113 ~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~ 172 (174)
T TIGR01685 113 LEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTFKKILEMW 172 (174)
T ss_pred HHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccHHHHHHHHHHh
Confidence 33333444 6999999999999999999999999999999988777766655444
No 29
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.79 E-value=1.9e-19 Score=154.36 Aligned_cols=105 Identities=10% Similarity=0.234 Sum_probs=93.9
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p 81 (280)
..+++|||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+ .+++++++ ..|+.+++++|++|
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd--~iv~~~~~~~~KP~p~~~~~a~~~~~~~~ 181 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR-ENAELMISLLGLSDFFQ--AVIIGSECEHAKPHPDPYLKALEVLKVSK 181 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCChhhCc--EEEecCcCCCCCCChHHHHHHHHHhCCCh
Confidence 4578999999999999999999999999999 89999999999999999 77766432 34999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAIT 116 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~ 116 (280)
++|+||||+..|+++|+++|+.+|++.++.....+
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l 216 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLL 216 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHH
Confidence 99999999999999999999999999876544433
No 30
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.79 E-value=1e-19 Score=149.35 Aligned_cols=96 Identities=17% Similarity=0.262 Sum_probs=86.1
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++|+ .++|+.|+++ ++++|+||+ ....++..++++|+.+||+.+.+.+ +|+|+.|..++++++++|++|
T Consensus 86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~-~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHGR-RPMAVGTGS-ESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred cCCCccH-HHHHHHHHhC-CCEEEEcCC-chHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 4567885 5899999876 899999999 8999999999999999999765432 477899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEEC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
+||||+.+|+++|+++|+++|+|.
T Consensus 163 l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999986
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.79 E-value=1.2e-19 Score=148.56 Aligned_cols=95 Identities=21% Similarity=0.300 Sum_probs=85.2
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++|++++|+||+ ..++..++++|+.+||+.+... .+|+++.|..++++++++|+++
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 162 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS---KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC 162 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 4689999999999999999999999998 3578899999999999975432 2477788999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEE
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v 260 (280)
+||||+..|+++|+++|+++|+|
T Consensus 163 v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 163 VVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred EEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999975
No 32
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.79 E-value=2.1e-19 Score=143.45 Aligned_cols=123 Identities=50% Similarity=0.787 Sum_probs=96.7
Q ss_pred cccccCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc----------ccccccceecCCChhHHH
Q psy8911 2 KVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN----------QYFDHKQIFPGQKTTHFA 71 (280)
Q Consensus 2 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~----------~~fd~~~i~~~~~~~~~~ 71 (280)
.++|+.+..+.+||++.++|+.|+++|++++++|.++.|+.++.+|+.+++. ++|++..|+.+++..+|+
T Consensus 35 ~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~ 114 (169)
T PF12689_consen 35 VVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFR 114 (169)
T ss_dssp -EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHH
T ss_pred EEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHH
Confidence 4788999999999999999999999999999999888779999999999999 999999999999999999
Q ss_pred HHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccc
Q psy8911 72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFI 124 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~ 124 (280)
.+.++.|+++++++||||..+|++...+.|+.++++++|.+++.+.+++..|.
T Consensus 115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~gL~~~~ 167 (169)
T PF12689_consen 115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFERGLEKFR 167 (169)
T ss_dssp HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHHH
T ss_pred HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988877653
No 33
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.78 E-value=1.3e-19 Score=152.59 Aligned_cols=96 Identities=11% Similarity=0.152 Sum_probs=85.7
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-ceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEIY-----PGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-~~~~-----~~~k~~~~~~~~~~~~~~~~~ 236 (280)
.+.++||+.++|+.| +++++|+||+ ....++..++++|+.++|+. +.+. .+|+++.|..+++++|++|++
T Consensus 86 ~~~~~~gv~~~L~~L---~~~~~ivTn~-~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 161 (221)
T PRK10563 86 ELEPIAGANALLESI---TVPMCVVSNG-PVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVEN 161 (221)
T ss_pred cCCcCCCHHHHHHHc---CCCEEEEeCC-cHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHH
Confidence 468999999999999 3899999999 88899999999999999963 3332 247789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECC
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
|+||||++.|+++|+++|++++++..
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 162 CILVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred eEEEeCcHhhHHHHHHCCCEEEEECC
Confidence 99999999999999999999999963
No 34
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.78 E-value=4.5e-19 Score=149.65 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=92.5
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
...++||+.++|+.|+++|++++|+||+ ....++..++++|+..+|+.+... .+|+++.|+.++++++++|++|
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNK-PTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 4679999999999999999999999999 888889999999999999865332 2477889999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+||||+.+|+++|+++|+++++|.+|..
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~ 197 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYN 197 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCC
Confidence 9999999999999999999999998764
No 35
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.77 E-value=1.1e-18 Score=150.14 Aligned_cols=102 Identities=12% Similarity=0.044 Sum_probs=92.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEe-----cCCCHHHHHHHHHHcCCC-CC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIY-----PGPKTTHFESLKKATGIE-YK 235 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~-----~~~k~~~~~~~~~~~~~~-~~ 235 (280)
.+.++||+.++|+.|+++|++++|+||+ ....++.+++++|+.+|| +.+.+. .+|+|+.|..+++++|+. |+
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~-~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 175 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGY-TREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVA 175 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCC-cHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCch
Confidence 4689999999999999999999999999 899999999999999996 754332 247889999999999995 99
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+|+||||+++|+++|+++||.+|+|.+|..
T Consensus 176 ~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 176 ACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred heEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 999999999999999999999999998864
No 36
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.77 E-value=7.4e-19 Score=163.42 Aligned_cols=100 Identities=20% Similarity=0.257 Sum_probs=90.3
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP----GPKTTHFESLKKATGIEYKDMV 238 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~k~~~~~~~~~~~~~~~~~~l 238 (280)
..++|||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+.+ .|||+.|..+++++ +|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~-~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNG-LTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCC-chHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 4689999999999999999999999999 9999999999999999999865433 37889999999886 579999
Q ss_pred EEeCCcCCcccccccCceEEEECCCCC
Q psy8911 239 FFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 239 ~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+|||+++|+++|+++||.+|++.++..
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~ 431 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFA 431 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCC
Confidence 999999999999999999999988753
No 37
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.76 E-value=2.5e-18 Score=143.17 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=95.5
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 236 (280)
..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+... .+|+++.|..+++++|++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGK-SGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCC-chHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 35789999999999999999999999999 888899999999999999975432 247789999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCC-CHHHH
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGM-SHAVL 269 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~-~~~~~ 269 (280)
|+||||+..|+.+|+++||+++.+.+|. +..++
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l 184 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEGDAGEL 184 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhh
Confidence 9999999999999999999999999887 34343
No 38
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.76 E-value=4.2e-18 Score=137.67 Aligned_cols=114 Identities=14% Similarity=0.074 Sum_probs=98.3
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-HHHHHHHHhhCC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-ILHAKQILNLIN 204 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-~~~~~~~l~~~g 204 (280)
.+++++|+||||++. ....++||+.++|+.|+++|++++|+||+ . ...+...++.++
T Consensus 25 v~~vv~D~Dgtl~~~---------------------~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~-~~~~~~~~~~~~~g 82 (170)
T TIGR01668 25 IKGVVLDKDNTLVYP---------------------DHNEAYPALRDWIEELKAAGRKLLIVSNN-AGEQRAKAVEKALG 82 (170)
T ss_pred CCEEEEecCCccccC---------------------CCCCcChhHHHHHHHHHHcCCEEEEEeCC-chHHHHHHHHHHcC
Confidence 368899999999752 23468999999999999999999999999 6 567777778888
Q ss_pred CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911 205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~-~di~~a~~aG~~~i~v~~g~~ 265 (280)
+..++. ..+|+++.|..++++++++|++|+||||+. .|+.+|+++||.+|+|.+|..
T Consensus 83 l~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 83 IPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 865542 236888999999999999999999999998 699999999999999998763
No 39
>PLN02645 phosphoglycolate phosphatase
Probab=99.76 E-value=4.7e-18 Score=150.29 Aligned_cols=223 Identities=14% Similarity=0.121 Sum_probs=147.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHH---HHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ---LLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~---~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
.++||+.++|+.|+++|++++++||++. ...+. .++.+|+.-.++ .|+++... ....++..+......+|+.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~-~~~~~~~~~l~~lGi~~~~~--~I~ts~~~--~~~~l~~~~~~~~~~V~vi 118 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNST-KSRAQYGKKFESLGLNVTEE--EIFSSSFA--AAAYLKSINFPKDKKVYVI 118 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCC-CCHHHHHHHHHHCCCCCChh--hEeehHHH--HHHHHHhhccCCCCEEEEE
Confidence 5799999999999999999999999884 33333 347788877777 77776543 3344445555555678888
Q ss_pred CCcccccccccCCCeEEEEcCCCchhhhhccc----cccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee
Q psy8911 89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGR----SVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI 164 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~----~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (280)
++....+.++++|+.++......... ..... ....-...++...|..+
T Consensus 119 G~~~~~~~l~~~Gi~~~~g~~~~~~~-~~~~~~~~~~~~~~i~aVvvg~d~~~--------------------------- 170 (311)
T PLN02645 119 GEEGILEELELAGFQYLGGPEDGDKK-IELKPGFLMEHDKDVGAVVVGFDRYI--------------------------- 170 (311)
T ss_pred cCHHHHHHHHHCCCEEecCccccccc-cccccccccccCCCCCEEEEecCCCC---------------------------
Confidence 88888999999999876521111000 00000 00000122222222222
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH-HHHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCC
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILH-AKQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~-~~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~ 235 (280)
-|.........|+.++-.++|+||+ .... ....+...|+..+|+.+. ...+|++..|..++++++++++
T Consensus 171 -~~~~l~~a~~~l~~~~g~~~i~tn~-d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~ 248 (311)
T PLN02645 171 -NYYKIQYATLCIRENPGCLFIATNR-DAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKS 248 (311)
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEeCC-CCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcc
Confidence 1222333444555432358999999 4432 233456677777887531 1235778889999999999999
Q ss_pred cEEEEeCCc-CCcccccccCceEEEECCCCC-HHHH
Q psy8911 236 DMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVL 269 (280)
Q Consensus 236 ~~l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~ 269 (280)
+++||||+. +||.+|+++|+++++|.+|.. .+.+
T Consensus 249 ~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~ 284 (311)
T PLN02645 249 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESML 284 (311)
T ss_pred cEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHH
Confidence 999999997 899999999999999998874 3433
No 40
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.76 E-value=2.4e-18 Score=138.37 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=92.9
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCcHH----------
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEIL---------- 194 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~~~---------- 194 (280)
.+.+.||+||||+...... .+-.....++ +|||+.++|+.|+++|++++|+||+ ...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~-----------~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~-~~~~~~~~~~~~~ 80 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK-----------VFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQ-SGIGRGKLSAESF 80 (166)
T ss_pred CcEEEEeCCCceEecCCCC-----------cccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCC-cccccCcccHHHH
Confidence 5789999999998632111 0111223344 7999999999999999999999998 542
Q ss_pred --HHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcC--CCCCcEEEEeCCc--------CCcccccccCceE
Q psy8911 195 --HAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTC 257 (280)
Q Consensus 195 --~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~--~~~~~~l~igD~~--------~di~~a~~aG~~~ 257 (280)
.++..++++|+.. +.+... .+|+++.+..++++++ ++|++++||||+. .|+++|+++|+++
T Consensus 81 ~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 81 KNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred HHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 4678899999954 222221 2477789999999999 9999999999997 5999999999998
Q ss_pred EE
Q psy8911 258 IH 259 (280)
Q Consensus 258 i~ 259 (280)
++
T Consensus 159 ~~ 160 (166)
T TIGR01664 159 KY 160 (166)
T ss_pred CC
Confidence 64
No 41
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.75 E-value=1.6e-18 Score=146.40 Aligned_cols=100 Identities=15% Similarity=0.218 Sum_probs=88.8
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p 81 (280)
..+.++||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+ .++++++ +..|+.+++++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~iv~s~~~~~~KP~p~~~~~~~~~~~~~p 166 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHP-HNLAVKLEHTGLDAHLD--LLLSTHTFGYPKEDQRLWQAVAEHTGLKA 166 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCH-HHHHHHHHHCCcHHHCC--EEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence 4578999999999999999999999999999 88999999999999999 6665432 234999999999999
Q ss_pred ccEEEEeCCcccccccccCCCe-EEEEcCCC
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVT-CILVEDGM 111 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~-~i~v~~~~ 111 (280)
++|+||||+..|+++|+++||+ +++|+++.
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 9999999999999999999998 56777654
No 42
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.75 E-value=2.4e-18 Score=142.55 Aligned_cols=97 Identities=19% Similarity=0.267 Sum_probs=88.9
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~ 82 (280)
.++++||+.++|++|+++|++++|+||++. ..++..++.+|+.++|| .++++++ ...|+.+++++|++|+
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~ 166 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSP-AMLKSLVKHAGLDDPFD--AVLSADAVRAYKPAPQVYQLALEALGVPPD 166 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHCCChhhhh--eeEehhhcCCCCCCHHHHHHHHHHhCCChh
Confidence 578999999999999999999999999999 89999999999999999 6776543 2349999999999999
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
+|+||||+..|+++|+++||++|++..
T Consensus 167 ~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 167 EVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred hEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 999999999999999999999999965
No 43
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.75 E-value=2.8e-18 Score=147.60 Aligned_cols=101 Identities=10% Similarity=0.024 Sum_probs=90.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecCCC-------hhHHHHHHHHhCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPGQK-------TTHFANLKKATGIE 80 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~~~-------~~~~~~~~~~~g~~ 80 (280)
..++++||+.++|+.|+++|++++|+||++. ..++.+++.+++.++| | .++++++ +..|..+++++|+.
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d--~ii~~~~~~~~KP~p~~~~~a~~~l~~~ 172 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPD--YNVTTDDVPAGRPAPWMALKNAIELGVY 172 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCc--eEEccccCCCCCCCHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999 8999999999999996 7 6666543 33499999999995
Q ss_pred -CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 81 -YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 81 -p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|++|+||||++.|+++|+++|+.+|+|.++..
T Consensus 173 ~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 173 DVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred CchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 99999999999999999999999999987653
No 44
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.75 E-value=4e-18 Score=141.18 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=91.0
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+.+.+ +|+++.|..+++++|++|++|
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNG-SPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 4678999999999999999999999999 8888999999999999999764432 477899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
+||||+..|+++|+++||++|+|..
T Consensus 169 ~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 169 LFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred EEEeCCHHHHHHHHHCCCcEEEecC
Confidence 9999999999999999999999974
No 45
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.74 E-value=1.8e-18 Score=148.93 Aligned_cols=99 Identities=12% Similarity=0.243 Sum_probs=90.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p 81 (280)
..+++|||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+ .+++++++ ..|+.+++++|++|
T Consensus 106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd--~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p 182 (260)
T PLN03243 106 GLYRLRPGSREFVQALKKHEIPIAVASTRPR-RYLERAIEAVGMEGFFS--VVLAAEDVYRGKPDPEMFMYAAERLGFIP 182 (260)
T ss_pred cCcccCCCHHHHHHHHHHCCCEEEEEeCcCH-HHHHHHHHHcCCHhhCc--EEEecccCCCCCCCHHHHHHHHHHhCCCh
Confidence 3578999999999999999999999999999 89999999999999999 77765432 34999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++|+||||+..|+++|+++||.+|++.+.
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g~ 211 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVAGK 211 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEecC
Confidence 99999999999999999999999999743
No 46
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.74 E-value=1.5e-18 Score=143.64 Aligned_cols=100 Identities=21% Similarity=0.243 Sum_probs=82.9
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc----ccceEec--CCCHHHHHHHHHHcCCCCC
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF----SNKEIYP--GPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f----~~~~~~~--~~k~~~~~~~~~~~~~~~~ 235 (280)
..+.+|||+.++|+.|+++ ++++++||+ ........++++++..+| +.+.... .|||+.|..+++++| |+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~-~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 71 RYLSAYDDALDVINKLKED-YDFVAVTAL-GDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred HhccCCCCHHHHHHHHHhc-CCEEEEeCC-ccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 3467999999999999987 568888998 666666677888887655 3332222 478899999999999 89
Q ss_pred cEEEEeCCcCCccccccc--CceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPL--GVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~a--G~~~i~v~~g~~ 265 (280)
+++||||+..|+++|++| ||++|++++|..
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 999999999999999999 999999998853
No 47
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.74 E-value=3.7e-18 Score=171.63 Aligned_cols=105 Identities=21% Similarity=0.285 Sum_probs=95.1
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV 238 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l 238 (280)
.++||+.++|+.|+++|++++|+||+ ....++..++++|+. .||+.+.+.. +|+|++|..++++++++|++|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~-~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSA-DRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 47999999999999999999999999 899999999999996 7899764432 4778999999999999999999
Q ss_pred EEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911 239 FFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ 270 (280)
Q Consensus 239 ~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~ 270 (280)
||||+..|+++|+++||++|+|.++...+++.
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~ 271 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSEEILK 271 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCHHHHh
Confidence 99999999999999999999999987766654
No 48
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.74 E-value=4.7e-18 Score=143.33 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=92.0
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE 80 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~ 80 (280)
...+.++||+.++|+.|+++|++++|+||+.. ...+..++.+++.++|+ .+++++ +...|+.+++++|++
T Consensus 88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 164 (222)
T PRK10826 88 EETRPLLPGVREALALCKAQGLKIGLASASPL-HMLEAVLTMFDLRDYFD--ALASAEKLPYSKPHPEVYLNCAAKLGVD 164 (222)
T ss_pred hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHhCcchhccc--EEEEcccCCCCCCCHHHHHHHHHHcCCC
Confidence 34578999999999999999999999999999 88999999999999999 666543 234599999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|++|+||||+..|+++|+++|+++|+++++..
T Consensus 165 ~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~ 196 (222)
T PRK10826 165 PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQ 196 (222)
T ss_pred HHHeEEEcCChhhHHHHHHcCCEEEEecCCcc
Confidence 99999999999999999999999999987653
No 49
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.74 E-value=5.6e-18 Score=142.04 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=91.9
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE 80 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~ 80 (280)
...+.++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+ .+++++ ++..|+.+++++|++
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTTKMR-DTVEMGLKLTGLDEFFD--VVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhcee--EEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 34578999999999999999999999999999 89999999999999999 666643 234599999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|++|+||||+.+|+++|+++|+.++++.++..
T Consensus 155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~ 186 (214)
T PRK13288 155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIK 186 (214)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence 99999999999999999999999999987643
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.74 E-value=3e-18 Score=144.14 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=84.7
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce-----------Ee----cCCCHHHHHHH
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-----------IY----PGPKTTHFESL 226 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~-----------~~----~~~k~~~~~~~ 226 (280)
..++++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|.... .+ ..||+..|..+
T Consensus 82 ~~~~~~~g~~~~l~~l~~~g~~~~IvS~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 82 ENLPLTEGAEELVKTLKEKGYKVAVISGG-FDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 45679999999999999999999999999 8899999999999999885310 11 12588999999
Q ss_pred HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
+++++++|++|+||||+.+|+++|+++|+.++.
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence 999999999999999999999999999998643
No 51
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.73 E-value=8.5e-18 Score=139.99 Aligned_cols=101 Identities=18% Similarity=0.264 Sum_probs=91.4
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p 81 (280)
..++++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+ .+++++ +...|+.+++++|++|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 148 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSG-PRARSLLEALGLLPLFD--HVIGSDEVPRPKPAPDIVREALRLLDVPP 148 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHcCChhhee--eEEecCcCCCCCCChHHHHHHHHHcCCCh
Confidence 4689999999999999999999999999999 88999999999999999 666543 2344999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
++|+||||+..|+++|+++|+++|++.++..
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~ 179 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTATVAALWGEG 179 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeEEEEEecCC
Confidence 9999999999999999999999999987753
No 52
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.73 E-value=5.9e-18 Score=143.02 Aligned_cols=99 Identities=21% Similarity=0.333 Sum_probs=89.9
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.++++|++.++|+.|+++ ++++|+||+ ....+...++.+||.++||.+.+++ +|.+.+|..+++++|++|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg-~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNG-ARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCC-ChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 378999999999999999 999999999 8889999999999999999875543 477799999999999999999
Q ss_pred EEEeCCcCCc-ccccccCceEEEECCC
Q psy8911 238 VFFDDEERNS-HDVSPLGVTCIHVKKG 263 (280)
Q Consensus 238 l~igD~~~di-~~a~~aG~~~i~v~~g 263 (280)
+||||+..+. .+|+++||++|++..+
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCC
Confidence 9999999966 9999999999999754
No 53
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.73 E-value=7.8e-18 Score=141.70 Aligned_cols=101 Identities=17% Similarity=0.328 Sum_probs=90.3
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p 81 (280)
..++++||+.++|+.|+++|++++|+||++. ..++..++.+++..||+ .++++++ +..|+.+++++|++|
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 167 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLP-VKQWEKLERLGVRDFFD--AVITSEEEGVEKPHPKIFYAALKRLGVKP 167 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhCChHHhcc--EEEEeccCCCCCCCHHHHHHHHHHcCCCh
Confidence 3468999999999999999999999999998 88899999999999999 6665533 234999999999999
Q ss_pred ccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911 82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~ 112 (280)
++|+||||+. .|+.+|+++|+++|++.++..
T Consensus 168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~ 199 (221)
T TIGR02253 168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKS 199 (221)
T ss_pred hhEEEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence 9999999998 899999999999999977643
No 54
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.73 E-value=6.4e-18 Score=142.32 Aligned_cols=103 Identities=20% Similarity=0.295 Sum_probs=92.7
Q ss_pred cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhC
Q psy8911 6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATG 78 (280)
Q Consensus 6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g 78 (280)
.....++++||+.++|..|+++|++++++||+++ ..++..++.+|+.+||+ .++.+ +.++.|+.+++++|
T Consensus 80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~-~~~~~~L~~~gl~~~f~--~~v~~~dv~~~KP~Pd~yL~Aa~~Lg 156 (221)
T COG0637 80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPR-RAAERVLARLGLLDYFD--VIVTADDVARGKPAPDIYLLAAERLG 156 (221)
T ss_pred hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChH-HHHHHHHHHccChhhcc--hhccHHHHhcCCCCCHHHHHHHHHcC
Confidence 3456689999999999999999999999999999 89999999999999999 65554 33445999999999
Q ss_pred CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
++|++||+||||+.+|+||++|||.+|.++.+.
T Consensus 157 v~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~ 189 (221)
T COG0637 157 VDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189 (221)
T ss_pred CChHHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence 999999999999999999999999999998743
No 55
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.73 E-value=9.7e-18 Score=140.26 Aligned_cols=101 Identities=18% Similarity=0.330 Sum_probs=91.3
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p 81 (280)
..++++||+.++|+.|+++|++++|+||++. ..++..++++++.++|+ .++++++ +..|+.+++++|++|
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 158 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPDPLLLAAERLGVAP 158 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCc--EEEecCCCCCCCCChHHHHHHHHHcCCCh
Confidence 4578999999999999999999999999999 89999999999999999 6666532 234999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
++|+||||+..|+++|+++|+.++++.++..
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~ 189 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYR 189 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence 9999999999999999999999999977643
No 56
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.72 E-value=2e-17 Score=143.37 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=90.9
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEec-----CCCHHHHHHHHHHcCCC-CC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIYP-----GPKTTHFESLKKATGIE-YK 235 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~~-----~~k~~~~~~~~~~~~~~-~~ 235 (280)
.+.++||+.++|+.|+++|++++|+||+ ....+...++.+++.++| +.+.+.. +|+|+.|..+++++|+. |+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~-~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 177 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGY-TREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVA 177 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 4679999999999999999999999999 888889999999998885 6543322 47789999999999996 69
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+|+||||+++|+++|+++|+.+|+|.+|..
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 999999999999999999999999998864
No 57
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.72 E-value=1.2e-17 Score=149.30 Aligned_cols=102 Identities=9% Similarity=0.147 Sum_probs=92.4
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p 81 (280)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+ .+++++++ ..|+.+++++|++|
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd--~Iv~sddv~~~KP~Peifl~A~~~lgl~P 289 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFS--VIVAAEDVYRGKPDPEMFIYAAQLLNFIP 289 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHce--EEEecCcCCCCCCCHHHHHHHHHHcCCCc
Confidence 4578999999999999999999999999999 99999999999999999 77766443 34999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
++|+||||+..|+++|+++||++|++.++...
T Consensus 290 eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~ 321 (381)
T PLN02575 290 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPI 321 (381)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999999999999999865433
No 58
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.72 E-value=7.3e-17 Score=143.43 Aligned_cols=136 Identities=16% Similarity=0.135 Sum_probs=108.4
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-------------- 191 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~-------------- 191 (280)
.+.+.||-||||+..... .+.......+.+|||+.++|++|+++|++++|+||++
T Consensus 2 ~k~l~lDrDgtl~~~~~~-----------~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~ 70 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPT-----------DFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDP 70 (354)
T ss_pred CcEEEEeCCCCccCCCCc-----------cccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhh
Confidence 468899999999864321 1222344568999999999999999999999999951
Q ss_pred cHHHHHHHHhhCCCccccccceEe----------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 192 EILHAKQILNLINLNQYFSNKEIY----------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 192 ~~~~~~~~l~~~gl~~~f~~~~~~----------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
.......+++.+++. |+.+.+. .+|++..+..++++++++|++++||||+..|+++|+++||++|+|.
T Consensus 71 ~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~ 148 (354)
T PRK05446 71 PHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence 244566788888884 5543221 2477889999999999999999999999999999999999999995
Q ss_pred -CCCCHHHHHHHHH
Q psy8911 262 -KGMSHAVLQKGLK 274 (280)
Q Consensus 262 -~g~~~~~~~~~~~ 274 (280)
.+++|+...+.|.
T Consensus 149 ~~~~~~~~i~~~l~ 162 (354)
T PRK05446 149 RETLNWDAIAEQLT 162 (354)
T ss_pred CCCCCHHHHHHHHh
Confidence 6788988776654
No 59
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.72 E-value=1.7e-17 Score=137.57 Aligned_cols=107 Identities=22% Similarity=0.260 Sum_probs=91.7
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh-CCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
..++||+.++|+.|+++|++++|+||+ ........+.. .++..+|+.+.++. +|+|+.|+.+++++|++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~-~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNT-NRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCC-chhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 358999999999999999999999999 76666655544 47889998764432 488899999999999999999
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK 271 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~ 271 (280)
+||||++.|+++|+++||++++++++.++.+..+
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 9999999999999999999999998877766443
No 60
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.71 E-value=1.9e-17 Score=147.01 Aligned_cols=119 Identities=23% Similarity=0.279 Sum_probs=101.2
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh---
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL--- 202 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~--- 202 (280)
.|++++|+|+|||.....+.. . ..-....+|+|+.++|+.|+++|++++|+||+ ....+...+++
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g---------~--~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n-~~~~a~~~l~~~~~ 70 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDG---------I--DNLNLSPLHKTLQEKIKTLKKQGFLLALASKN-DEDDAKKVFERRKD 70 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCC---------c--cccccCccHHHHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHhCcc
Confidence 478999999999974433321 0 00011246899999999999999999999999 88999999999
Q ss_pred -CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911 203 -INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 203 -~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~ 256 (280)
+++.+||+.+.+..+||++++..+++++|++|++++||||++.|+.++++++-.
T Consensus 71 ~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 71 FILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 999999998877788999999999999999999999999999999999996654
No 61
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.71 E-value=9.8e-18 Score=139.05 Aligned_cols=104 Identities=26% Similarity=0.338 Sum_probs=88.9
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh-cCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL-FNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK 82 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~-~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~ 82 (280)
..++||+.++|+.|+++|++++|+||++. ...+..+.. .++..+|| .++++++ +..|+.+++++|++|+
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~-~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~ 159 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEVRAAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSAA 159 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCch-hhHHHHHhhchhHHHhcC--EEEEecccCCCCCCHHHHHHHHHHcCCChh
Confidence 46899999999999999999999999999 666666555 47889999 6666533 3349999999999999
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCCchhhhh
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITL 117 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~ 117 (280)
+|+||||+..|+++|+++||++++++++.+....+
T Consensus 160 ~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l 194 (199)
T PRK09456 160 DAVFFDDNADNIEAANALGITSILVTDKQTIPDYF 194 (199)
T ss_pred HeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHH
Confidence 99999999999999999999999998876665443
No 62
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.71 E-value=1.6e-17 Score=140.86 Aligned_cols=101 Identities=20% Similarity=0.364 Sum_probs=90.5
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE 80 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~ 80 (280)
...++++||+.++|++|+++|++++|+||++. ..++..++.+++.++|+ .+++++ ++..|..+++++|++
T Consensus 91 ~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~l~~~ 167 (229)
T PRK13226 91 GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCA--VLIGGDTLAERKPHPLPLLVAAERIGVA 167 (229)
T ss_pred hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhccc--EEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence 34578999999999999999999999999999 88889999999999999 665543 233499999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
|++|+||||+.+|+++|+++|+++|++.++.
T Consensus 168 p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 198 (229)
T PRK13226 168 PTDCVYVGDDERDILAARAAGMPSVAALWGY 198 (229)
T ss_pred hhhEEEeCCCHHHHHHHHHCCCcEEEEeecC
Confidence 9999999999999999999999999997765
No 63
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.71 E-value=1.6e-17 Score=133.83 Aligned_cols=96 Identities=21% Similarity=0.423 Sum_probs=88.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p 81 (280)
...+++||+.++|+.|+++|++++++||++. ..++..++.+++.++|+ .++++++ ...|+.+++++|++|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p 150 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFD--EIISSDDVGSRKPDPDAYRRALEKLGIPP 150 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCS--EEEEGGGSSSSTTSHHHHHHHHHHHTSSG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccc--cccccchhhhhhhHHHHHHHHHHHcCCCc
Confidence 5689999999999999999999999999999 89999999999999999 6665432 244999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEE
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
++|+||||+..|+++|+++||.+|+|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999986
No 64
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.71 E-value=1.9e-17 Score=139.87 Aligned_cols=133 Identities=9% Similarity=-0.019 Sum_probs=96.8
Q ss_pred eeEEEecCCCCCCccccc-cc-Cccccc-----C-----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC---
Q psy8911 127 NHLSKKLDYTLWPLHVHD-LV-APFKKI-----G-----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--- 191 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~-~~-~~~~~~-----~-----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--- 191 (280)
-.++||+||||+|+.... +. +.+... . ..+.........+++++.++|++|+++|++++++||+.
T Consensus 64 ~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k 143 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGK 143 (237)
T ss_pred eEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 389999999999976531 11 222211 0 11111223455778889999999999999999999972
Q ss_pred cHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911 192 EILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 192 ~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
....++.+++++|+.++|+.+..... +|++.. .+++++++ ++||||+.+|+.+|+++|+.++.|.+|+
T Consensus 144 ~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 144 TDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred CHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 23477888999999999986533222 445444 46677776 7999999999999999999999998765
No 65
>PRK11587 putative phosphatase; Provisional
Probab=99.71 E-value=2.7e-17 Score=138.38 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=87.1
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE 80 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~ 80 (280)
...+++|||+.++|+.|+++|++++|+||++. ...+..++..++ .+|+ .+++++ ++..|..+++++|++
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~-~~~~~~l~~~~l-~~~~--~i~~~~~~~~~KP~p~~~~~~~~~~g~~ 154 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSV-PVASARHKAAGL-PAPE--VFVTAERVKRGKPEPDAYLLGAQLLGLA 154 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCc-hHHHHHHHhcCC-CCcc--EEEEHHHhcCCCCCcHHHHHHHHHcCCC
Confidence 45678999999999999999999999999998 777888888888 5677 555442 233499999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
|++|+||||+..|+++|+++|+.+|++.++.
T Consensus 155 p~~~l~igDs~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 155 PQECVVVEDAPAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred cccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence 9999999999999999999999999997654
No 66
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.71 E-value=1.2e-17 Score=132.61 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=81.1
Q ss_pred CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe----cCCCHHHHHHHHHHcCCCCC
Q psy8911 160 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY----PGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~----~~~k~~~~~~~~~~~~~~~~ 235 (280)
+......+||+.++|+.|+++|++++|+||+ .+..+...++++ +.++|+.+.+. .+|+++.|..++++++++|
T Consensus 59 ~~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~-~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~- 135 (154)
T TIGR01549 59 YDAEEAYIRGAADLLKRLKEAGIKLGIISNG-SLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP- 135 (154)
T ss_pred cchhheeccCHHHHHHHHHHCcCeEEEEeCC-chHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-
Confidence 3345667899999999999999999999999 888889899998 88899865433 3577899999999999999
Q ss_pred cEEEEeCCcCCcccccccC
Q psy8911 236 DMVFFDDEERNSHDVSPLG 254 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG 254 (280)
+|+||||+..|+++|+++|
T Consensus 136 ~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 136 EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999999987
No 67
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.71 E-value=3.2e-17 Score=138.11 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=90.4
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCcc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYKD 83 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~~ 83 (280)
..+|||+.++|..|+++|++++|+||++. ..++.+++.+|+.+||+ .++++ +++..+..+++++|++|++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~-~~~~~~l~~~gl~~~F~--~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~ 164 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFD--VIVGGDDVPPPKPDPEPLLLLLEKLGLDPEE 164 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHhCCccccc--eEEcCCCCCCCCcCHHHHHHHHHHhCCChhh
Confidence 58999999999999999999999999999 99999999999999999 66662 2233499999999999999
Q ss_pred EEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 84 MVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
++||||+..|+++|++||+.+++|.+|..
T Consensus 165 ~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 165 ALMVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred eEEECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 99999999999999999999999988763
No 68
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.71 E-value=3.2e-17 Score=132.00 Aligned_cols=98 Identities=20% Similarity=0.350 Sum_probs=90.7
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~ 236 (280)
...+++||+.++|+.|+++|++++++||+ .+..+...++.+|+.++|+.+.++. +|++..|..++++++++|++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNG-SRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecC-CcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 56789999999999999999999999999 8999999999999999999765543 36678999999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEE
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v 260 (280)
|+||||++.|+++|+++||.+|+|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
No 69
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.70 E-value=2.5e-17 Score=142.79 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=89.8
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecCCC-------hhHHHHHHHHhCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPGQK-------TTHFANLKKATGI 79 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~~~-------~~~~~~~~~~~g~ 79 (280)
...+.++||+.++|+.|+++|++++|+||++. ..++..++.+++.++| + .++++++ +..|..+++++|+
T Consensus 97 ~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~-~~~~~~l~~~~l~~~~~d--~i~~~~~~~~~KP~p~~~~~a~~~l~~ 173 (267)
T PRK13478 97 ADYATPIPGVLEVIAALRARGIKIGSTTGYTR-EMMDVVVPLAAAQGYRPD--HVVTTDDVPAGRPYPWMALKNAIELGV 173 (267)
T ss_pred hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHHhhcCCCce--EEEcCCcCCCCCCChHHHHHHHHHcCC
Confidence 34578999999999999999999999999999 8899999999998885 7 6665533 3349999999999
Q ss_pred C-CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 80 E-YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
. |++|+||||+++|+++|+++|+++|+|.++..
T Consensus 174 ~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 174 YDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 6 69999999999999999999999999987654
No 70
>COG4996 Predicted phosphatase [General function prediction only]
Probab=99.70 E-value=2.6e-16 Score=116.81 Aligned_cols=141 Identities=21% Similarity=0.307 Sum_probs=115.2
Q ss_pred eEEEecCCCCCCccccccc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 128 HLSKKLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
++.||.||||||.+..... |||.... ..+.+..+.++++||.++++|+.++..|+.++.+|.+ .+..+-+.|+.+++
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN-~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN-FEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC-chHHHHHHHHHhch
Confidence 5789999999999887777 9999877 7889999999999999999999999999999999999 99999999999999
Q ss_pred ccccccceEecCCCH-HHHHHHHHH------cCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911 206 NQYFSNKEIYPGPKT-THFESLKKA------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL 269 (280)
Q Consensus 206 ~~~f~~~~~~~~~k~-~~~~~~~~~------~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~ 269 (280)
..||+..++.+.|.+ .++-+++.+ ..++|++++|++|..-.+......=..+-.+..+.+...+
T Consensus 81 ~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~ 151 (164)
T COG4996 81 LQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCY 151 (164)
T ss_pred hhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHH
Confidence 999999888777766 344444443 4689999999999998877777632223333344444443
No 71
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.70 E-value=2.7e-17 Score=134.45 Aligned_cols=95 Identities=20% Similarity=0.287 Sum_probs=85.1
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV 238 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l 238 (280)
..++||+.++|+.|+++|++++|+||+ .. ....++++|+.++|+.+... .+|+++.|..++++++++|++|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~-~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASAS-KN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCC-cc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 478999999999999999999999998 43 45689999999999975432 24888999999999999999999
Q ss_pred EEeCCcCCcccccccCceEEEEC
Q psy8911 239 FFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 239 ~igD~~~di~~a~~aG~~~i~v~ 261 (280)
||||+++|+++|+++||++|+|+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999874
No 72
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.70 E-value=3.4e-17 Score=141.97 Aligned_cols=104 Identities=17% Similarity=0.315 Sum_probs=93.0
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC----hhHHHHHHHHhCCCCc
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK----TTHFANLKKATGIEYK 82 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~----~~~~~~~~~~~g~~p~ 82 (280)
....++++||+.++|+.|+++|++++|+||+.. ..++..++.+|+.++|+ .++++++ ...|+.++++++++|+
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~-~~~~~~L~~~gl~~~F~--~vi~~~~~~~k~~~~~~~l~~~~~~p~ 213 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSR-QNIEAFLQRQGLRSLFS--VVQAGTPILSKRRALSQLVAREGWQPA 213 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhheE--EEEecCCCCCCHHHHHHHHHHhCcChh
Confidence 345678999999999999999999999999999 89999999999999999 6665533 3449999999999999
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
+|+||||+..|+++|+++|+.+|++.++...
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~ 244 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWGFND 244 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCCC
Confidence 9999999999999999999999999887543
No 73
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.70 E-value=3.4e-17 Score=135.60 Aligned_cols=101 Identities=20% Similarity=0.199 Sum_probs=86.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------------cCCCHHHHHHHH
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------------PGPKTTHFESLK 227 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------~~~k~~~~~~~~ 227 (280)
.+.++||+.++|+.|+++|++++|+||+ ....++..++++|+..+|...... +.+|.+.+..++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGG-IMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 4679999999999999999999999999 889999999999999888643221 113345788899
Q ss_pred HHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911 228 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 228 ~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
++++++|++++||||+.+|+.+|+++|+.++..+.+.
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 9999999999999999999999999999887766543
No 74
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.70 E-value=2.6e-17 Score=130.88 Aligned_cols=120 Identities=10% Similarity=0.092 Sum_probs=94.6
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+++.||+||||++....-.. .......+.+.++. +|++|+++|++++|+||+ ....+...++++|+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~----------~~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~-~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTN----------NGEEIKAFNVRDGY--GIRCALKSGIEVAIITGR-KAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEECC----------CCcEEEEEechhHH--HHHHHHHCCCEEEEEECC-CCHHHHHHHHHcCCC
Confidence 67899999999874321100 00000112223333 899999999999999999 888889999999999
Q ss_pred cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911 207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
++|+. .+||++.+..++++++++|++|+||||+.+|+.+++++|+. +.+.+..
T Consensus 69 ~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 69 HLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAH 121 (154)
T ss_pred EEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcC
Confidence 99974 36889999999999999999999999999999999999997 7776553
No 75
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.70 E-value=5e-17 Score=136.78 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=90.4
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--ccccccceecCCC-------hhHHHHHHHHhCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQIFPGQK-------TTHFANLKKATGI 79 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~i~~~~~-------~~~~~~~~~~~g~ 79 (280)
...+++||+.++|++|+++|++++|+||++. ..++..++.+++. .+|+ .++++++ +..|+.+++++|+
T Consensus 84 ~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~~f~--~i~~~~~~~~~KP~p~~~~~a~~~~~~ 160 (220)
T TIGR03351 84 GPPVALPGAEEAFRSLRSSGIKVALTTGFDR-DTAERLLEKLGWTVGDDVD--AVVCPSDVAAGRPAPDLILRAMELTGV 160 (220)
T ss_pred cCCccCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHhhhhhhccCC--EEEcCCcCCCCCCCHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999 8999999999998 9999 7776643 2349999999999
Q ss_pred C-CccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911 80 E-YKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT 112 (280)
Q Consensus 80 ~-p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~ 112 (280)
. |++|+||||++.|+++|+++||.+ +++.++..
T Consensus 161 ~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~ 195 (220)
T TIGR03351 161 QDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAH 195 (220)
T ss_pred CChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCC
Confidence 7 799999999999999999999999 89977643
No 76
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.70 E-value=4.3e-17 Score=128.80 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=96.7
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeE-----ccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVM-----DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 201 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~ 201 (280)
..+++|+||||+........ +.......+. ......+.++||+.++|+.|+ ++++++|+||+ ....++.+++
T Consensus 3 ~~lvldld~tl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~-~~~~~~~il~ 79 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFK-EWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAG-LRMYADPVLD 79 (148)
T ss_pred cEEEEeCCCCeECCCCCcCC-CCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCC-cHHHHHHHHH
Confidence 46899999999876431111 0000000000 112345789999999999999 57999999999 9999999999
Q ss_pred hCCCcc-ccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911 202 LINLNQ-YFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 202 ~~gl~~-~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v 260 (280)
++++.. +|+.+...+. .||. |.+++++++.+|++|+||||++.|+++++++|+.+--.
T Consensus 80 ~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f 141 (148)
T smart00577 80 LLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPW 141 (148)
T ss_pred HhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCc
Confidence 999965 4576544332 3444 99999999999999999999999999999999876443
No 77
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.70 E-value=1e-16 Score=138.05 Aligned_cols=193 Identities=16% Similarity=0.173 Sum_probs=134.8
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecCCChh-HHHHHHHHhCCCCccEEEEe
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v~ 88 (280)
++|++.+.|+.|+++|++++++||++. .. ....++.+|+.--.+ .|+++.... .|.. +.+ ..++++|
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~-~~~~~~~~~l~~~g~~~~~~--~i~ts~~~~~~~l~---~~~---~~~~~~g 92 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTK-ESKQDLLERLQRLGFDISED--EVFTPAPAARQLLE---EKQ---LRPMLLV 92 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCC-CCHHHHHHHHHHcCCCCCHH--HeEcHHHHHHHHHH---hcC---CCeEEEE
Confidence 899999999999999999999999877 43 555677778753333 676665432 2332 222 1355545
Q ss_pred CCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCC
Q psy8911 89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYR 168 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (280)
... ...... |+. . .-++.++...|. .--.|+
T Consensus 93 ~~~--~~~~~~-~~~-----~--------------~~~~~Vv~g~~~---------------------------~~~~y~ 123 (257)
T TIGR01458 93 DDR--VLPDFD-GID-----T--------------SDPNCVVMGLAP---------------------------EHFSYQ 123 (257)
T ss_pred Ccc--HHHHhc-cCC-----C--------------CCCCEEEEeccc---------------------------CccCHH
Confidence 421 111110 110 0 001222332221 011378
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911 169 GVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYKDMVFF 240 (280)
Q Consensus 169 g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~l~i 240 (280)
++.+.++.|++.+++++|+||+ ........+..+|+..+|+.+. ...+|++..|..++++++++|++++||
T Consensus 124 ~l~~a~~~L~~~~~~~~iatn~-~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~v 202 (257)
T TIGR01458 124 ILNQAFRLLLDGAKPLLIAIGK-GRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMI 202 (257)
T ss_pred HHHHHHHHHHcCCCCEEEEeCC-CCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEE
Confidence 8999999999999999999999 6666666677788888887432 224688899999999999999999999
Q ss_pred eCCc-CCcccccccCceEEEECCCC
Q psy8911 241 DDEE-RNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 241 gD~~-~di~~a~~aG~~~i~v~~g~ 264 (280)
||+. +|+.+|+++|+++++|.+|.
T Consensus 203 GD~~~~Di~~a~~~G~~~i~v~~G~ 227 (257)
T TIGR01458 203 GDDCRDDVGGAQDCGMRGIQVRTGK 227 (257)
T ss_pred CCCcHHHHHHHHHcCCeEEEECCCC
Confidence 9997 89999999999999999885
No 78
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.69 E-value=4.7e-17 Score=136.32 Aligned_cols=101 Identities=16% Similarity=0.198 Sum_probs=87.4
Q ss_pred CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccc---eEecCCCHHHHHHHHHHcCCCC
Q psy8911 161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGPKTTHFESLKKATGIEY 234 (280)
Q Consensus 161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~---~~~~~~k~~~~~~~~~~~~~~~ 234 (280)
.....+|||+.++|+.|+++|++++|+||+ ....++..++++ ++.+||+.. .++.+|+++.|..+++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 445689999999999999999999999999 888888888886 565555532 2345688899999999999999
Q ss_pred CcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 235 KDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 235 ~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
++|+||||+..|+++|+++||+++++..
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r 197 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVR 197 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEEC
Confidence 9999999999999999999999999964
No 79
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.69 E-value=3.7e-17 Score=133.68 Aligned_cols=94 Identities=21% Similarity=0.332 Sum_probs=83.1
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~ 82 (280)
...++||+.++|+.|+++|++++|+||+.. .+..++.+++.++|+ .+++++ ++..|+.++++++++|+
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~ 159 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFD--AIVDPAEIKKGKPDPEIFLAAAEGLGVSPS 159 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCc--EEEehhhcCCCCCChHHHHHHHHHcCCCHH
Confidence 357899999999999999999999999765 467899999999999 665543 33449999999999999
Q ss_pred cEEEEeCCcccccccccCCCeEEEEc
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVE 108 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~ 108 (280)
+|+||||++.|+++|+++||++|+|+
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999873
No 80
>PRK09449 dUMP phosphatase; Provisional
Probab=99.69 E-value=8e-17 Score=135.90 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=87.7
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCC-CCc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIE-YKD 236 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~-~~~ 236 (280)
.+.++||+.++|+.|+ +|++++|+||+ ....++..++++|+.+||+.+.+.. +|+++.|..+++++|+. +++
T Consensus 93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GKVKMGIITNG-FTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred cCccCccHHHHHHHHH-hCCeEEEEeCC-cHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 3679999999999999 67999999999 8888999999999999999865443 47789999999999985 589
Q ss_pred EEEEeCCc-CCcccccccCceEEEECC
Q psy8911 237 MVFFDDEE-RNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 237 ~l~igD~~-~di~~a~~aG~~~i~v~~ 262 (280)
|+||||+. .|+++|+++||+++++..
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 99999998 699999999999999974
No 81
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.69 E-value=1.1e-16 Score=128.69 Aligned_cols=119 Identities=9% Similarity=0.070 Sum_probs=96.2
Q ss_pred ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHH-HHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPE-ILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
...++++||.||||.|... +++..+.+++-|..... -++.|+++|++++|+||+ ....++..+++
T Consensus 5 ~~i~~~v~d~dGv~tdg~~-------------~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k-~~~~~~~~l~~ 70 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGRI-------------VINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSK-KSGAVRHRAEE 70 (169)
T ss_pred ccCeEEEEeCceeeECCeE-------------EEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECC-CcHHHHHHHHH
Confidence 3468999999999988421 22333443433332222 257899999999999999 89999999999
Q ss_pred CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911 203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v 260 (280)
+|+.+||+.. +||++.+..++++++++|++|++|||+.+|+.+++.+|+..+.-
T Consensus 71 lgi~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 71 LKIKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred CCCcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 9999999853 68899999999999999999999999999999999999886543
No 82
>PRK06769 hypothetical protein; Validated
Probab=99.68 E-value=5.9e-17 Score=131.36 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=83.7
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchH--------HHHHHHhhcCccccccccce------ecCCChhHHHHHH
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQ--------GAQQLLDLFNWNQYFDHKQI------FPGQKTTHFANLK 74 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--------~~~~~l~~~~l~~~fd~~~i------~~~~~~~~~~~~~ 74 (280)
..+++|||+.++|++|+++|++++|+||++. . .....++.+++.++|..... ...++++.|+.++
T Consensus 25 ~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~ 103 (173)
T PRK06769 25 GSFTLFPFTKASLQKLKANHIKIFSFTNQPG-IADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAA 103 (173)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEECCch-hcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHH
Confidence 4678999999999999999999999999874 2 13444777888777762111 1233445699999
Q ss_pred HHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+++|++|++|+||||+..|+++|+++|+++|++.++..
T Consensus 104 ~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~ 141 (173)
T PRK06769 104 EKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAG 141 (173)
T ss_pred HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999999999999987653
No 83
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.68 E-value=6.9e-17 Score=131.64 Aligned_cols=93 Identities=18% Similarity=0.294 Sum_probs=82.8
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCcc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYKD 83 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~~ 83 (280)
++++||+.++|+.|+++|++++|+||++. .. ...+.++++.++|+ .++++. ++..|+.+++++|++|++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~~~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 159 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR-DH-AVLVQELGLRDLFD--VVIFSGDVGRGKPDPDIYLLALKKLGLKPEE 159 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch-HH-HHHHHhcCCHHHCC--EEEEcCCCCCCCCCHHHHHHHHHHcCCCcce
Confidence 78999999999999999999999999999 66 66666799999999 665542 234499999999999999
Q ss_pred EEEEeCCcccccccccCCCeEEEE
Q psy8911 84 MVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
|+||||+..|+++|+++|+.+|++
T Consensus 160 ~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 160 CLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEeC
Confidence 999999999999999999999975
No 84
>PLN02811 hydrolase
Probab=99.68 E-value=7.5e-17 Score=135.84 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=87.1
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH-HHHhhCCCccccccceEec-------CCCHHHHHHHHHHcC---
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK-QILNLINLNQYFSNKEIYP-------GPKTTHFESLKKATG--- 231 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~-~~l~~~gl~~~f~~~~~~~-------~~k~~~~~~~~~~~~--- 231 (280)
...++||+.++|+.|+++|++++|+||+ .+.... ..+++.++.++|+.+.+.. +|+|+.|..++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~-~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGS-HKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCC-chhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 4678999999999999999999999999 655443 4555568889998755444 467789999999996
Q ss_pred CCCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 232 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 232 ~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
++|++|+||||+..|+++|+++||++|+|+++..
T Consensus 155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~ 188 (220)
T PLN02811 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRL 188 (220)
T ss_pred CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCC
Confidence 9999999999999999999999999999987653
No 85
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.68 E-value=1.1e-16 Score=130.21 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=80.4
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCcccccccccee------------
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNWNQYFDHKQIF------------ 62 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l~~~fd~~~i~------------ 62 (280)
..++++||+.++|++|+++|++++|+||++.. ......+..+++. |+ .++
T Consensus 23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~i~~~~~~~~~~~~~ 98 (176)
T TIGR00213 23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LD--GIYYCPHHPEGVEEF 98 (176)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--cc--EEEECCCCCcccccc
Confidence 46789999999999999999999999999841 2334566666554 44 221
Q ss_pred ------cCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911 63 ------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT 112 (280)
Q Consensus 63 ------~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~ 112 (280)
..+++..|+.+++++|++|++|+||||+..|+++|+++|+.+ +++.++..
T Consensus 99 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~ 155 (176)
T TIGR00213 99 RQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKP 155 (176)
T ss_pred cCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCc
Confidence 123445599999999999999999999999999999999998 78877654
No 86
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.68 E-value=1.1e-16 Score=130.47 Aligned_cols=95 Identities=18% Similarity=0.247 Sum_probs=84.8
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV 238 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l 238 (280)
+.++||+.++|+.|+++|++++|+||+ .... ...+.++|+.++|+.+..+ .+|+++.|..++++++++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~-~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNS-PRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCC-chHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 688999999999999999999999999 6666 6666669999999976442 24777899999999999999999
Q ss_pred EEeCCcCCcccccccCceEEEE
Q psy8911 239 FFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 239 ~igD~~~di~~a~~aG~~~i~v 260 (280)
||||++.|+.+|+++|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999975
No 87
>PRK09449 dUMP phosphatase; Provisional
Probab=99.68 E-value=4.7e-17 Score=137.30 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=86.3
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCC
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGI 79 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~ 79 (280)
+...++++||+.++|+.|+ +|++++|+||++. ..++..++.+++.++|| .++++.+ +..|..+++++|+
T Consensus 90 ~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~~~~~~~~~~~ 165 (224)
T PRK09449 90 MAEICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFD--LLVISEQVGVAKPDVAIFDYALEQMGN 165 (224)
T ss_pred HhhcCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcC--EEEEECccCCCCCCHHHHHHHHHHcCC
Confidence 3345789999999999999 6899999999999 88999999999999999 6665533 2349999999998
Q ss_pred C-CccEEEEeCCc-ccccccccCCCeEEEEcC
Q psy8911 80 E-YKDMVFFDDEE-RNSHDVSPLGVTCILVED 109 (280)
Q Consensus 80 ~-p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~ 109 (280)
. |++|+||||+. .|+++|+++||+++++..
T Consensus 166 ~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 166 PDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred CCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 5 58999999998 699999999999999964
No 88
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.68 E-value=1.5e-16 Score=122.53 Aligned_cols=118 Identities=20% Similarity=0.223 Sum_probs=99.2
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 207 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~ 207 (280)
+++||+||||++...... ......+++++.++|+.|+++|++++|+||+ .+..++..++.+++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~-~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA--------------EIEELELYPGVKEALKELKEKGIKLALATNK-SRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCcccc--------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHHcCCch
Confidence 368999999987533321 1345689999999999999999999999999 8999999999999987
Q ss_pred ccccceEec---------------------CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911 208 YFSNKEIYP---------------------GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 208 ~f~~~~~~~---------------------~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v 260 (280)
+|+.+.... +|++..+..++++++.+++++++|||+..|+.+++++|+++++|
T Consensus 66 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 66 YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 777532211 46778899999999999999999999999999999999999875
No 89
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.67 E-value=7.9e-17 Score=134.73 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=86.0
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH--HHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILH--AKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~--~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~ 235 (280)
.+.++||+.++|+.|+++|++++|+||+ .... ....+..+++.++|+.+..+ .+|+|..|..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~-~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNN-FPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCC-CCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999999999999999998 4432 33345567888999976443 24778899999999999999
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
+|+||||+..|+.+|+++||++|++.++.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 99999999999999999999999998643
No 90
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.67 E-value=1.6e-16 Score=133.08 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=84.9
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---Ccccccccc--ceec-CCChhHHHHHHHHhCCC
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHK--QIFP-GQKTTHFANLKKATGIE 80 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~--~i~~-~~~~~~~~~~~~~~g~~ 80 (280)
......+|||+.++|+.|+++|++++|+||++. ..++.+++.. ++.++|+.. .+.+ .++...|..+++++|++
T Consensus 90 ~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~-~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~ 168 (220)
T TIGR01691 90 GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSV-PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP 168 (220)
T ss_pred CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcC
Confidence 445568999999999999999999999999999 7777777775 555555511 2222 23455699999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
|++|+||||+..|+++|+++||+++++..+
T Consensus 169 p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~ 198 (220)
T TIGR01691 169 PREILFLSDIINELDAARKAGLHTGQLVRP 198 (220)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEEECC
Confidence 999999999999999999999999998553
No 91
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.67 E-value=1.3e-16 Score=132.65 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=84.1
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
...++||+.++|+.|+++|++++|+||+ ... ....++++|+.++|+.+.+.. +|+++.|..+++++|++|++|
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNF-DSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEA 180 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCC-chh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHE
Confidence 3578999999999999999999999999 654 477899999999999764432 477788999999999999999
Q ss_pred EEEeCCc-CCcccccccCceEEE
Q psy8911 238 VFFDDEE-RNSHDVSPLGVTCIH 259 (280)
Q Consensus 238 l~igD~~-~di~~a~~aG~~~i~ 259 (280)
+||||+. .|+++|+++||++|+
T Consensus 181 ~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EEECCCchHHHHHHHHcCCeeeC
Confidence 9999998 799999999999874
No 92
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.67 E-value=4.9e-17 Score=136.01 Aligned_cols=101 Identities=22% Similarity=0.276 Sum_probs=84.3
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHH--HHHHHhhcCccccccccceecCC-----C--hhHHHHHHHHhCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG--AQQLLDLFNWNQYFDHKQIFPGQ-----K--TTHFANLKKATGI 79 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~--~~~~l~~~~l~~~fd~~~i~~~~-----~--~~~~~~~~~~~g~ 79 (280)
..++++||+.++|+.|+++|++++|+||++. .. ....+...++.++|| .++++. | +..|+.+++++|+
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~-~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~g~ 167 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFP-TDHSAEEALLPGDIMALFD--AVVESCLEGLRKPDPRIYQLMLERLGV 167 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCC-ccchhhhHhhhhhhHhhCC--EEEEeeecCCCCCCHHHHHHHHHHcCC
Confidence 3578999999999999999999999999976 33 333445568889999 665543 2 3349999999999
Q ss_pred CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+|++|+||||+..|+.+|+++||++|++.++..
T Consensus 168 ~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~ 200 (211)
T TIGR02247 168 APEECVFLDDLGSNLKPAAALGITTIKVSDEEQ 200 (211)
T ss_pred CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHH
Confidence 999999999999999999999999999976543
No 93
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.67 E-value=1.9e-16 Score=139.44 Aligned_cols=127 Identities=16% Similarity=0.149 Sum_probs=103.7
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
.+.+.+|.||||.+....... .. .......++||+.++|+.|+++|++++++||+ +....+..++++++
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~--------~~--~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r-~~~~~~~~l~~l~~ 226 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPY--------DW--TKVKEDKPNPMVVELVKMYKAAGYEIIVVSGR-DGVCEEDTVEWLRQ 226 (300)
T ss_pred CCEEEEECCCcCcCCCCCCcc--------ch--hhcccCCCChhHHHHHHHHHhCCCEEEEEeCC-ChhhHHHHHHHHHH
Confidence 357899999999864221100 00 01123578999999999999999999999999 88889999999999
Q ss_pred cc-ccccceEec------------CCCHHHHHHHHHHcCC-CCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 206 NQ-YFSNKEIYP------------GPKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 206 ~~-~f~~~~~~~------------~~k~~~~~~~~~~~~~-~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.. ||+.+.... +|++..+..++++++. +|++|+||||+.+|+++|+++||.+++|.+|
T Consensus 227 ~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 227 TDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred cCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 97 898654333 4667889999999988 6899999999999999999999999999887
No 94
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.66 E-value=1.6e-16 Score=125.46 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=81.4
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCccc--ccccccee-------cCCC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQ--YFDHKQIF-------PGQK 66 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~--~fd~~~i~-------~~~~ 66 (280)
.+++|||+.++|+.|+++||+++|+||++. ...++..++.+++.. +|.. .+. ..++
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADNCSCRKPK 103 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCCCCCCCCC
Confidence 468999999999999999999999999873 135667888888862 2221 111 1244
Q ss_pred hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++.|+.+++++|++|++|+||||+..|+++|+++|+++++++++
T Consensus 104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 55699999999999999999999999999999999999999764
No 95
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.66 E-value=1.2e-16 Score=132.75 Aligned_cols=93 Identities=19% Similarity=0.347 Sum_probs=82.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~ 82 (280)
...++||+.++|+.|+++|++++|+||++. . .+..++.+++.++|| .++++++ ...|+.+++++|++|+
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~-~~~~l~~~~l~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~ 178 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDS-R-LRGLLEALGLLEYFD--FVVTSYEVGAEKPDPKIFQEALERAGISPE 178 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCch-h-HHHHHHHCCcHHhcc--eEEeecccCCCCCCHHHHHHHHHHcCCChh
Confidence 457999999999999999999999999987 5 578899999999999 6665432 2349999999999999
Q ss_pred cEEEEeCCc-ccccccccCCCeEEE
Q psy8911 83 DMVFFDDEE-RNSHDVSPLGVTCIL 106 (280)
Q Consensus 83 ~~l~v~D~~-~~i~aa~~~G~~~i~ 106 (280)
+|+||||+. .|+++|+++||++||
T Consensus 179 ~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 179 EALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999997 799999999999985
No 96
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.66 E-value=2.6e-16 Score=132.55 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=90.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHc-CCCCCc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKAT-GIEYKD 236 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~-~~~~~~ 236 (280)
.++++||+.++|+.|+++ ++++|+||+ ....++..++++++..+|+.+.++. +|+++.|..+++++ +++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~-~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNG-VRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCC-chHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 467999999999999999 999999999 8888899999999999999765432 37788999999999 999999
Q ss_pred EEEEeCCc-CCcccccccCceEEEECCC
Q psy8911 237 MVFFDDEE-RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 237 ~l~igD~~-~di~~a~~aG~~~i~v~~g 263 (280)
|+||||+. +|+++|+++||++|+++++
T Consensus 173 ~v~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred eEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence 99999998 7999999999999999865
No 97
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.66 E-value=2e-16 Score=126.43 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=83.7
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCC---------------chHHHHHHHhhcCccccccccce-ec----C---
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTS---------------EIQGAQQLLDLFNWNQYFDHKQI-FP----G--- 64 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---------------~~~~~~~~l~~~~l~~~fd~~~i-~~----~--- 64 (280)
...+++|||+.++|++|+++|++++|+||++ . ..++.+++.+|+. |+ .+ ++ +
T Consensus 25 ~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~-~~~~~~l~~~gl~--fd--~ii~~~~~~~~~~ 99 (161)
T TIGR01261 25 LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPH-NLMLQIFRSQGII--FD--DVLICPHFPDDNC 99 (161)
T ss_pred HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHH-HHHHHHHHHCCCc--ee--EEEECCCCCCCCC
Confidence 3467899999999999999999999999974 4 5678889999996 76 33 33 2
Q ss_pred ----CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 65 ----QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 65 ----~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++.+.|+.++++++++|++|+||||+..|+++|+++|++++++..+
T Consensus 100 ~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 100 DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 2234599999999999999999999999999999999999999764
No 98
>PLN02940 riboflavin kinase
Probab=99.66 E-value=1.6e-16 Score=143.98 Aligned_cols=100 Identities=20% Similarity=0.280 Sum_probs=89.9
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHh-hcCccccccccceecCCCh-------hHHHHHHHHhCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLD-LFNWNQYFDHKQIFPGQKT-------THFANLKKATGIE 80 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~-~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~ 80 (280)
..+.++||+.++|+.|+++|++++|+||++. ..++..++ .+++.++|| .+++++++ ..|+.+++++|++
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~-~~~~~~l~~~~gl~~~Fd--~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPR-ANIEAKISCHQGWKESFS--VIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhccChHhhCC--EEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999 78888887 789999999 77766432 3499999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
|++|+||||+..|+++|+++|+.+|+++++.
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~ 197 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIP 197 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999999999999999998754
No 99
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.66 E-value=3.5e-16 Score=136.75 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=86.3
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc---cceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS---NKEIY-----PGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~---~~~~~-----~~~k~~~~~~~~~~~~~~~~ 235 (280)
++++||+.++|+.|+++|++++|+||+ ....+...+++++...+|+ .+ .. .+|+|+.|..+++++|++|+
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~-~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~ 220 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTS-NEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPS 220 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChH
Confidence 579999999999999999999999999 8888888888775444444 22 21 24777899999999999999
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
+|+||||+..|+++|+++||.+|+|.+|..
T Consensus 221 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 250 (286)
T PLN02779 221 RCVVVEDSVIGLQAAKAAGMRCIVTKSSYT 250 (286)
T ss_pred HEEEEeCCHHhHHHHHHcCCEEEEEccCCc
Confidence 999999999999999999999999988754
No 100
>PLN02954 phosphoserine phosphatase
Probab=99.65 E-value=1.6e-16 Score=134.02 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=80.4
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccce--------E---------ecCCCHHHHH
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKE--------I---------YPGPKTTHFE 224 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~--------~---------~~~~k~~~~~ 224 (280)
..++||+.++|+.|+++|++++|+|++ ....++.+++.+|+. .+|.... . ...+|+..++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~-~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGG-FRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 568999999999999999999999999 889999999999997 4664210 0 1235788899
Q ss_pred HHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 225 SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 225 ~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.++++++. ++|+||||+.+|+++|+++|+.++....+
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~ 198 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG 198 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence 99998875 69999999999999999989887765444
No 101
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.65 E-value=5.5e-16 Score=126.65 Aligned_cols=103 Identities=19% Similarity=0.149 Sum_probs=82.3
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCccccccccceec---------
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQYFDHKQIFP--------- 63 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~~fd~~~i~~--------- 63 (280)
....+.++||+.++|++|+++|++++|+||++. .+.....++.+++ +|+ .++.
T Consensus 24 ~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~--~i~~~~~~~~~~~ 99 (181)
T PRK08942 24 SPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLD--GIYYCPHHPEDGC 99 (181)
T ss_pred CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCC
Confidence 345678999999999999999999999999973 0234455666776 366 3321
Q ss_pred ---CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911 64 ---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 64 ---~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
.+++..|+.+++++|++|++|+||||+..|+.+|+++|+.++++.++...
T Consensus 100 ~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~ 152 (181)
T PRK08942 100 DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV 152 (181)
T ss_pred cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 12234499999999999999999999999999999999999999876543
No 102
>PLN02811 hydrolase
Probab=99.65 E-value=2.2e-16 Score=133.02 Aligned_cols=99 Identities=11% Similarity=0.200 Sum_probs=84.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHH-HHhhcCccccccccceecCC--Ch-------hHHHHHHHHhC-
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ-LLDLFNWNQYFDHKQIFPGQ--KT-------THFANLKKATG- 78 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~-~l~~~~l~~~fd~~~i~~~~--~~-------~~~~~~~~~~g- 78 (280)
.+.++||+.++|+.|+++|++++|+||++. ..... .++..++.++|+ .+++++ ++ ..|+.+++++|
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~-~~~~~~~~~~~~l~~~f~--~i~~~~~~~~~~~KP~p~~~~~a~~~~~~ 152 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHK-RHFDLKTQRHGELFSLMH--HVVTGDDPEVKQGKPAPDIFLAAARRFED 152 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCch-hhHHHHHcccHHHHhhCC--EEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence 578899999999999999999999999987 54443 444457889999 666665 22 34999999996
Q ss_pred --CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 79 --IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 79 --~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
++|++|+||||+..|+++|+++|+++|++.++.
T Consensus 153 ~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~ 187 (220)
T PLN02811 153 GPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPR 187 (220)
T ss_pred CCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCC
Confidence 999999999999999999999999999997654
No 103
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.64 E-value=2.3e-16 Score=128.94 Aligned_cols=94 Identities=21% Similarity=0.367 Sum_probs=83.6
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p 81 (280)
..+.++||+.++|+.|+++|++++++||+ . .++..++.+++.+||+ .+++++ ++..|..+++++|++|
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~--~~~~~l~~~~l~~~f~--~v~~~~~~~~~kp~~~~~~~~~~~~~~~~ 159 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS-K--NADRILAKLGLTDYFD--AIVDADEVKEGKPHPETFLLAAELLGVSP 159 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc-h--hHHHHHHHcChHHHCC--EeeehhhCCCCCCChHHHHHHHHHcCCCH
Confidence 34789999999999999999999999998 4 4788999999999999 666543 2334999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEE
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
++|+||||+..|+++|+++|+++|+|
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999875
No 104
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.64 E-value=2.9e-16 Score=132.26 Aligned_cols=97 Identities=11% Similarity=0.165 Sum_probs=87.9
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHh-CCCC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKAT-GIEY 81 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~-g~~p 81 (280)
.++++||+.++|+.|+++ ++++|+||++. ..++..++.+++..+|| .++++.+ +..|+.+++++ |++|
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~-~~~~~~l~~~~l~~~fd--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 170 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVR-ETQYKRLRKSGLFPFFD--DIFVSEDAGIQKPDKEIFNYALERMPKFSK 170 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCch-HHHHHHHHHCCcHhhcC--EEEEcCccCCCCCCHHHHHHHHHHhcCCCc
Confidence 478999999999999999 99999999999 89999999999999999 6766533 23499999999 9999
Q ss_pred ccEEEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911 82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~ 110 (280)
++|+||||+. .|+++|+++||++|++.++
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence 9999999998 7999999999999999654
No 105
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.64 E-value=8.8e-16 Score=118.90 Aligned_cols=97 Identities=21% Similarity=0.229 Sum_probs=82.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCC--------chHHHHHHHhhcCcccccccccee---cCCChhHHHHHHHHh
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTS--------EIQGAQQLLDLFNWNQYFDHKQIF---PGQKTTHFANLKKAT 77 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~--------~~~~~~~~l~~~~l~~~fd~~~i~---~~~~~~~~~~~~~~~ 77 (280)
.+..+|||+.++|+.|+++|++++|+||++ . ..++..++.+++...|. .+. ..++.+.|+.+++++
T Consensus 22 ~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~~~~~l~~~~l~~~~~--~~~~~~~KP~~~~~~~~~~~~ 98 (132)
T TIGR01662 22 DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS-GRVARRLEELGVPIDVL--YACPHCRKPKPGMFLEALKRF 98 (132)
T ss_pred HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHH-HHHHHHHHHCCCCEEEE--EECCCCCCCChHHHHHHHHHc
Confidence 346899999999999999999999999999 7 77889999999864333 221 133445699999999
Q ss_pred -CCCCccEEEEeC-CcccccccccCCCeEEEEc
Q psy8911 78 -GIEYKDMVFFDD-EERNSHDVSPLGVTCILVE 108 (280)
Q Consensus 78 -g~~p~~~l~v~D-~~~~i~aa~~~G~~~i~v~ 108 (280)
+++|++|+|||| +..|+.+|+++|+.+|+++
T Consensus 99 ~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 99 NEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 599999999999 7999999999999999985
No 106
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.64 E-value=4.5e-16 Score=136.05 Aligned_cols=101 Identities=15% Similarity=0.262 Sum_probs=84.0
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCcc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYKD 83 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~~ 83 (280)
++++||+.++|+.|+++|++++|+||++. ..+..+++.++...+|+...+++++ ++..|..+++++|++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE-KAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 58999999999999999999999999999 8888888877544444421122332 233499999999999999
Q ss_pred EEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 84 MVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|+||||+..|+++|+++||.+|++.++..
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 250 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYT 250 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCc
Confidence 99999999999999999999999977643
No 107
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.64 E-value=3.6e-16 Score=128.02 Aligned_cols=94 Identities=22% Similarity=0.377 Sum_probs=84.6
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------cCCCHHHHHHHHHHcCCC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------PGPKTTHFESLKKATGIE 233 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------~~~k~~~~~~~~~~~~~~ 233 (280)
.+.++||+.++|+.|+ ++++|+||+ ....+...++++|+.++|+.+.+. .+|+|+.|+.+++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNG-DRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCC-CHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4568999999999998 479999999 888999999999999999976443 256778999999999999
Q ss_pred CCcEEEEeCCcCCcccccccCceEEEE
Q psy8911 234 YKDMVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 234 ~~~~l~igD~~~di~~a~~aG~~~i~v 260 (280)
|++|+||||++.|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
No 108
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.64 E-value=5.9e-16 Score=130.78 Aligned_cols=98 Identities=18% Similarity=0.316 Sum_probs=87.9
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChh-------HHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTT-------HFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~-------~~~~~~~~~g~~p~ 82 (280)
.++++|++.++|+.|+++ ++++|+||+.. ..++..++.+|+.++|| .++.+++.+ .|..+++++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~-~~~~~~l~~~gl~~~Fd--~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~ 172 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGAR-PHQERKLRQLGLLDYFD--AVFISEDVGVAKPDPEIFEYALEKLGVPPE 172 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCCh-HHHHHHHHHcCChhhhh--eEEEecccccCCCCcHHHHHHHHHcCCCcc
Confidence 478999999999999999 99999999988 89999999999999999 777665443 39999999999999
Q ss_pred cEEEEeCCccc-ccccccCCCeEEEEcCCC
Q psy8911 83 DMVFFDDEERN-SHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 83 ~~l~v~D~~~~-i~aa~~~G~~~i~v~~~~ 111 (280)
+|+||||+..+ |.+|+++||++||+..+.
T Consensus 173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 173 EALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred eEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 99999999775 599999999999996543
No 109
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.63 E-value=5.4e-16 Score=134.67 Aligned_cols=100 Identities=24% Similarity=0.400 Sum_probs=90.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~ 82 (280)
...++||+.++|+.|+++|++++|+||++. ..++..++.+++..+|+ .+++++. +..|+.+++++|++|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~-~~~~~~l~~~~i~~~f~--~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~ 175 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPE-RFVAPLLDQMKIGRYFR--WIIGGDTLPQKKPDPAALLFVMKMAGVPPS 175 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcH-HHHHHHHHHcCcHhhCe--EEEecCCCCCCCCCcHHHHHHHHHhCCChh
Confidence 467899999999999999999999999999 88999999999999999 6666532 2349999999999999
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+|+||||+.+|+++|+++|+++++|.++..
T Consensus 176 ~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~ 205 (272)
T PRK13223 176 QSLFVGDSRSDVLAAKAAGVQCVALSYGYN 205 (272)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCC
Confidence 999999999999999999999999987653
No 110
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.63 E-value=6e-16 Score=126.59 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=92.8
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCC-HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRG-VPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
.++++.||+||||++...... .....+..+.- =...++.|+++|++++|+||+ ....+...++++
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~-------------~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~-~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMG-------------NNGEELKAFNVRDGYGIRCLLTSGIEVAIITGR-KSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEc-------------CCCCEEEEEeccchHHHHHHHHCCCEEEEEeCC-CcHHHHHHHHHc
Confidence 478999999999997422110 11111211111 024678889999999999999 888899999999
Q ss_pred CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
|+..+|+. ..+|+..+..+++++|++|++++||||+.+|+.+++++|+.++ +.
T Consensus 86 gl~~~f~g----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~ 138 (183)
T PRK09484 86 GITHLYQG----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VA 138 (183)
T ss_pred CCceeecC----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cC
Confidence 99999873 3578899999999999999999999999999999999999954 54
No 111
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.63 E-value=1.1e-15 Score=129.13 Aligned_cols=133 Identities=10% Similarity=0.055 Sum_probs=93.7
Q ss_pred eEEEecCCCCCCccccccc--Ccccc----c--C----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC---c
Q psy8911 128 HLSKKLDYTLWPLHVHDLV--APFKK----I--G----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS---E 192 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~--~~~~~----~--~----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~---~ 192 (280)
.++||+|||++|....... ..|.. . . ..+.........++||++++|+.|+++|++++++||+. .
T Consensus 65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~ 144 (237)
T PRK11009 65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT 144 (237)
T ss_pred EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 8899999999984222111 11110 0 0 01111123457799999999999999999999999951 3
Q ss_pred HHHHHHHHhhCCC--ccccccceEecCC-CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911 193 ILHAKQILNLINL--NQYFSNKEIYPGP-KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 193 ~~~~~~~l~~~gl--~~~f~~~~~~~~~-k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~ 265 (280)
...++.+++++|+ .++|+.+..++.. |+... .+++++++ ++||||+..|+++|++||+.+|.|.+|+.
T Consensus 145 ~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 145 ETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred HHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 5577778888999 8899864433321 22222 35566665 99999999999999999999999998864
No 112
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.62 E-value=5.9e-16 Score=130.38 Aligned_cols=96 Identities=13% Similarity=0.225 Sum_probs=84.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p 81 (280)
..++++||+.++|+.| +++++|+||++. ..++..++.+++.++|+. .+++++ ++..|..+++++|++|
T Consensus 85 ~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~-~v~~~~~~~~~KP~p~~~~~a~~~~~~~p 159 (221)
T PRK10563 85 SELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPD-KLFSGYDIQRWKPDPALMFHAAEAMNVNV 159 (221)
T ss_pred ccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcc-eEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence 4578999999999999 499999999998 889999999999999962 344432 2345999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
++|+||||++.|+++|+++|++++++..
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 160 ENCILVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred HHeEEEeCcHhhHHHHHHCCCEEEEECC
Confidence 9999999999999999999999999854
No 113
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.61 E-value=1.5e-15 Score=128.10 Aligned_cols=100 Identities=19% Similarity=0.321 Sum_probs=90.3
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p 81 (280)
....++||+.++|+.|+++|++++|+||+.. ...+.+++.+++..+|+ .+++++ ++..|+.++++++++|
T Consensus 90 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 166 (226)
T PRK13222 90 GGSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFS--VVIGGDSLPNKKPDPAPLLLACEKLGLDP 166 (226)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCcc--EEEcCCCCCCCCcChHHHHHHHHHcCCCh
Confidence 4578999999999999999999999999999 88999999999999999 666543 2344999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
++|++|||+.+|+++|+++|++++++.++.
T Consensus 167 ~~~i~igD~~~Di~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 167 EEMLFVGDSRNDIQAARAAGCPSVGVTYGY 196 (226)
T ss_pred hheEEECCCHHHHHHHHHCCCcEEEECcCC
Confidence 999999999999999999999999998664
No 114
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.61 E-value=9.2e-16 Score=125.85 Aligned_cols=95 Identities=17% Similarity=0.286 Sum_probs=84.7
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p 81 (280)
..+.++|+ .++|..|+++ ++++|+||++. ..++..++.+++.+||| .+++++++ ..|..+++++|++|
T Consensus 85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~-~~~~~~l~~~~l~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 159 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSES-AIAEALLAHLGLRRYFD--AVVAADDVQHHKPAPDTFLRCAQLMGVQP 159 (188)
T ss_pred ccCCCccH-HHHHHHHHhC-CCEEEEcCCch-HHHHHHHHhCCcHhHce--EEEehhhccCCCCChHHHHHHHHHcCCCH
Confidence 45678885 6999999876 99999999999 89999999999999999 77766432 34999999999999
Q ss_pred ccEEEEeCCcccccccccCCCeEEEEc
Q psy8911 82 KDMVFFDDEERNSHDVSPLGVTCILVE 108 (280)
Q Consensus 82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~ 108 (280)
++|+||||+..|+++|+++|+++|++.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999884
No 115
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.61 E-value=4.7e-15 Score=115.31 Aligned_cols=110 Identities=17% Similarity=0.136 Sum_probs=94.5
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+.+++|+|.||++- ..-.+-|.+++.+..++++|+++.|+||+ .+..+....+.+|+.
T Consensus 29 kgvi~DlDNTLv~w---------------------d~~~~tpe~~~W~~e~k~~gi~v~vvSNn-~e~RV~~~~~~l~v~ 86 (175)
T COG2179 29 KGVILDLDNTLVPW---------------------DNPDATPELRAWLAELKEAGIKVVVVSNN-KESRVARAAEKLGVP 86 (175)
T ss_pred cEEEEeccCceecc---------------------cCCCCCHHHHHHHHHHHhcCCEEEEEeCC-CHHHHHhhhhhcCCc
Confidence 68899999999741 12235589999999999999999999999 888888899999887
Q ss_pred cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcC-CcccccccCceEEEECC
Q psy8911 207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~ 262 (280)
-++-. .+|-+..|.+++++++++|++|+||||... |+.+++.+||+||.|..
T Consensus 87 fi~~A----~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 87 FIYRA----KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred eeecc----cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 44432 357778899999999999999999999987 99999999999999963
No 116
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.60 E-value=8.4e-16 Score=135.81 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=83.9
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-------ce--------EecCCCHHHHHHH
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-------KE--------IYPGPKTTHFESL 226 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-------~~--------~~~~~k~~~~~~~ 226 (280)
..++++||+.++|+.|++.|++++|+|++ ....++..++++|+...|.. .. ....+|++.++.+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg-~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGG-FTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECC-cchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 45789999999999999999999999999 77788889999999875531 00 0124788999999
Q ss_pred HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
++++|+++++|++|||+.+|+..+++||+.+++
T Consensus 257 a~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 257 AQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 999999999999999999999999999998775
No 117
>KOG2914|consensus
Probab=99.60 E-value=5.9e-16 Score=128.66 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=89.2
Q ss_pred CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC-CccccccceEec-------CCCHHHHHHHHHHcCC
Q psy8911 161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN-LNQYFSNKEIYP-------GPKTTHFESLKKATGI 232 (280)
Q Consensus 161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g-l~~~f~~~~~~~-------~~k~~~~~~~~~~~~~ 232 (280)
.....++||+.++++.|+.+|++++++|+. .+...+..+.+++ +...|..+..++ +|.|++|..+++++|.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s-~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSS-TSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecC-CcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 345689999999999999999999999999 8888888888876 777787655422 3778999999999999
Q ss_pred CC-CcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 233 EY-KDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 233 ~~-~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
+| +.|++|+|++.++++|++|||++|+|++
T Consensus 167 ~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 167 PPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 99 9999999999999999999999999986
No 118
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.60 E-value=1.1e-15 Score=125.01 Aligned_cols=92 Identities=24% Similarity=0.386 Sum_probs=82.3
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---------C--hhHHHHHHHHhC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ---------K--TTHFANLKKATG 78 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~---------~--~~~~~~~~~~~g 78 (280)
.++++||+.++|+.|+ ++++|+||++. ..++..++.+|+.++|| .+++++ | +..|+.+++++|
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~-~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDR-AHARRALNRLGIEDCFD--GIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCH-HHHHHHHHHcCcHhhhC--eEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 4678999999999998 58999999999 89999999999999999 666542 2 234999999999
Q ss_pred CCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911 79 IEYKDMVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
++|++|+||||+..|+++|+++|+++|+|
T Consensus 156 ~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999975
No 119
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.59 E-value=2.3e-15 Score=128.30 Aligned_cols=94 Identities=12% Similarity=0.160 Sum_probs=82.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+.|+++ ++++|+||+ ... ++++||.+||+.+.... +|+++.|..+++++|++|++|
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~-~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNG-NAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECC-Cch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 467899999999999976 999999998 443 47899999999764432 478899999999999999999
Q ss_pred EEEeCCc-CCcccccccCceEEEECCC
Q psy8911 238 VFFDDEE-RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 238 l~igD~~-~di~~a~~aG~~~i~v~~g 263 (280)
+||||++ .|+++|+++||+++++..+
T Consensus 184 ~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 184 LHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 9999995 9999999999999999753
No 120
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.59 E-value=1.3e-15 Score=129.88 Aligned_cols=94 Identities=13% Similarity=0.235 Sum_probs=81.4
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIE 80 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~ 80 (280)
...+.++||+.++|+.|+++ ++++|+||++. . ++.+|+.+||| .++++++ ...|+.+++++|++
T Consensus 109 ~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd--~i~~~~~~~~~KP~p~~~~~a~~~~~~~ 179 (238)
T PRK10748 109 RSRIDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFE--FVLRAGPHGRSKPFSDMYHLAAEKLNVP 179 (238)
T ss_pred hhcCCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhc--eeEecccCCcCCCcHHHHHHHHHHcCCC
Confidence 34578999999999999975 99999999988 4 37789999999 6665532 23499999999999
Q ss_pred CccEEEEeCC-cccccccccCCCeEEEEcCC
Q psy8911 81 YKDMVFFDDE-ERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 81 p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~ 110 (280)
|++|+||||+ ..|+.+|+++||+++++..+
T Consensus 180 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 180 IGEILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred hhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 9999999999 59999999999999999654
No 121
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.56 E-value=1.2e-14 Score=117.52 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=83.8
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCC-chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTS-EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~-~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
...++||+.++|+.|+++|++++|+||++ . ..++.+++.+++..++. . ..++...|..+++++|++|++|+|||
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~-~~~~~~~~~~gl~~~~~--~--~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAGE-QRAKAVEKALGIPVLPH--A--VKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCchH-HHHHHHHHHcCCEEEcC--C--CCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 45889999999999999999999999999 5 67777778888755443 1 24455669999999999999999999
Q ss_pred CCc-ccccccccCCCeEEEEcCCCc
Q psy8911 89 DEE-RNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 89 D~~-~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|+. .|+.+|+++|+.+|++.++..
T Consensus 116 Ds~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 116 DRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CcchHHHHHHHHcCCeEEEEccCcC
Confidence 998 699999999999999987653
No 122
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.56 E-value=8.2e-15 Score=136.38 Aligned_cols=98 Identities=18% Similarity=0.330 Sum_probs=87.2
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------ChhHHHHHHHHhCCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------KTTHFANLKKATGIEYK 82 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------~~~~~~~~~~~~g~~p~ 82 (280)
..+++|||+.++|++|+++|++++|+||++. ..++..++.+++.+||+ .+++++ ++..|..+++++ +|+
T Consensus 327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~-~~~~~~l~~~~l~~~f~--~i~~~d~v~~~~kP~~~~~al~~l--~~~ 401 (459)
T PRK06698 327 GKGALYPNVKEIFTYIKENNCSIYIASNGLT-EYLRAIVSYYDLDQWVT--ETFSIEQINSLNKSDLVKSILNKY--DIK 401 (459)
T ss_pred cCCCcCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHCCcHhhcc--eeEecCCCCCCCCcHHHHHHHHhc--Ccc
Confidence 3578999999999999999999999999999 99999999999999999 666653 334588888876 579
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
+|++|||+++|+++|+++|+.+|++.++.
T Consensus 402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~ 430 (459)
T PRK06698 402 EAAVVGDRLSDINAAKDNGLIAIGCNFDF 430 (459)
T ss_pred eEEEEeCCHHHHHHHHHCCCeEEEEeCCC
Confidence 99999999999999999999999997754
No 123
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.55 E-value=1e-14 Score=146.96 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=93.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCC-------hhHHHHHHHHhCCCCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQK-------TTHFANLKKATGIEYKD 83 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~~ 83 (280)
.++||+.++|++|+++|++++|+||+.. ..++..++.+++. .||| .++++++ +..|+.+++++|++|++
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~-~~~~~~L~~~gl~~~~Fd--~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e 237 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADR-IKVDANLAAAGLPLSMFD--AIVSADAFENLKPAPDIFLAAAKILGVPTSE 237 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHcCCChhHCC--EEEECcccccCCCCHHHHHHHHHHcCcCccc
Confidence 4799999999999999999999999999 8999999999996 7999 6766543 23499999999999999
Q ss_pred EEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccc
Q psy8911 84 MVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSV 122 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~ 122 (280)
|+||||+..|+++|+++||++|++.++....++......
T Consensus 238 ~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~ 276 (1057)
T PLN02919 238 CVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPS 276 (1057)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCC
Confidence 999999999999999999999999887655554433333
No 124
>KOG3085|consensus
Probab=99.55 E-value=1.2e-14 Score=121.48 Aligned_cols=100 Identities=20% Similarity=0.315 Sum_probs=86.7
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY 81 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p 81 (280)
...++.+++.++++.||++|+.++++||... ..+..+..+++..||| .++.|.+ ...|+.+++++|+.|
T Consensus 110 ~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~--r~~~~l~~~~l~~~fD--~vv~S~e~g~~KPDp~If~~al~~l~v~P 185 (237)
T KOG3085|consen 110 SAWKYLDGMQELLQKLRKKGTILGIISNFDD--RLRLLLLPLGLSAYFD--FVVESCEVGLEKPDPRIFQLALERLGVKP 185 (237)
T ss_pred cCceeccHHHHHHHHHHhCCeEEEEecCCcH--HHHHHhhccCHHHhhh--hhhhhhhhccCCCChHHHHHHHHHhCCCh
Confidence 3567889999999999999999999999998 5679999999999999 5655533 334999999999999
Q ss_pred ccEEEEeCCcc-cccccccCCCeEEEEcCCCc
Q psy8911 82 KDMVFFDDEER-NSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 82 ~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~~ 112 (280)
++|++|||+.. |+++|+++||++++|-+..+
T Consensus 186 ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 186 EECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred HHeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 99999999965 59999999999999965543
No 125
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.54 E-value=9.8e-15 Score=119.49 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=75.6
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------------------c----C
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------------------P----G 217 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------------~----~ 217 (280)
.++++||+.++|+.|+++|++++|+||+ ....++..++++++.++|+.+... + .
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDG-NDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCC-cHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 4689999999999999999999999999 888999999999999999864321 0 0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 257 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~ 257 (280)
+|+..+..+.++. |++++||||+.+|+.+|+++++-+
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 3556666666554 899999999999999999987643
No 126
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.54 E-value=4.6e-15 Score=124.88 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=75.5
Q ss_pred CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--cc--ccceE-----ecCCCHHH---------
Q psy8911 161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YF--SNKEI-----YPGPKTTH--------- 222 (280)
Q Consensus 161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f--~~~~~-----~~~~k~~~--------- 222 (280)
...+.++||+.++|+.|+++|++++|+||+ ....++.+++++ +.. ++ +.... ...|.+..
T Consensus 70 ~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~-~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 70 LETAEIREGFHEFVQFVKENNIPFYVVSGG-MDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred HhCCCcCcCHHHHHHHHHHcCCeEEEECCC-cHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 345789999999999999999999999999 888999999998 643 33 11101 11233321
Q ss_pred -HHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911 223 -FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 258 (280)
Q Consensus 223 -~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i 258 (280)
...++++++.++++|+||||+.+|+.+|++||+.++
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 357889999999999999999999999999999433
No 127
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.54 E-value=1.7e-14 Score=119.32 Aligned_cols=88 Identities=16% Similarity=0.078 Sum_probs=78.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec----CCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP----GPKTTHFESLKKATGIEYKDMVFF 240 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~k~~~~~~~~~~~~~~~~~~l~i 240 (280)
.+.+++.++|+.|+++|++++|+||+ ....++..++.+|+.+||+.+.... +|+++.|..+++++|++|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGR-PRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCC-CHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 34556799999999999999999999 8999999999999999999754332 477889999999999999999999
Q ss_pred eCCcCCccccccc
Q psy8911 241 DDEERNSHDVSPL 253 (280)
Q Consensus 241 gD~~~di~~a~~a 253 (280)
||+++|+++|+++
T Consensus 185 GD~~~Di~aA~~a 197 (197)
T TIGR01548 185 GDTVDDIITGRKA 197 (197)
T ss_pred eCCHHHHHHHHhC
Confidence 9999999999875
No 128
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.52 E-value=1.6e-14 Score=114.08 Aligned_cols=95 Identities=13% Similarity=0.061 Sum_probs=81.9
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCChh----HHHHHHHHhCCCCcc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKTT----HFANLKKATGIEYKD 83 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~~----~~~~~~~~~g~~p~~ 83 (280)
..+.++||+.++|++|+ ++++++|+||++. ..++.+++.+++.. +|+ .+++++++. .|.++++++|++|++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~-~~~~~il~~l~~~~~~f~--~i~~~~d~~~~KP~~~k~l~~l~~~p~~ 117 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLR-MYADPVLDLLDPKKYFGY--RRLFRDECVFVKGKYVKDLSLLGRDLSN 117 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcH-HHHHHHHHHhCcCCCEee--eEEECccccccCCeEeecHHHcCCChhc
Confidence 34688999999999999 5799999999999 99999999999865 458 677665432 299999999999999
Q ss_pred EEEEeCCcccccccccCCCeEEEE
Q psy8911 84 MVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
|++|||++.++.+|+++|+.+--+
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i~~f 141 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPIKPW 141 (148)
T ss_pred EEEEECCHHHhhcCccCEEEecCc
Confidence 999999999999999998876544
No 129
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.52 E-value=1e-13 Score=123.39 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=85.1
Q ss_pred cCCCcceecCCHHHHHHHHHHCCceEEEecCC---------------CchHHHHHHHhhcCcccccccccee-c------
Q psy8911 6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRT---------------SEIQGAQQLLDLFNWNQYFDHKQIF-P------ 63 (280)
Q Consensus 6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---------------~~~~~~~~~l~~~~l~~~fd~~~i~-~------ 63 (280)
.....+.+|||+.++|.+|+++|++++|+||+ +. .....+++.+++. |+ .++ +
T Consensus 24 ~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~-~~i~~iL~~~gl~--fd--~i~i~~~~~sd 98 (354)
T PRK05446 24 DSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPH-NLMMQIFESQGIK--FD--EVLICPHFPED 98 (354)
T ss_pred cCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHH-HHHHHHHHHcCCc--ee--eEEEeCCcCcc
Confidence 44556899999999999999999999999996 23 4566778888883 66 332 2
Q ss_pred -----CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC-CCchhh
Q psy8911 64 -----GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED-GMTNAI 115 (280)
Q Consensus 64 -----~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~-~~~~~~ 115 (280)
.+++..|..+++.++++|++++||||+..|+++|+++||++|++.. +..|..
T Consensus 99 ~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~~~~ 156 (354)
T PRK05446 99 NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARETLNWDA 156 (354)
T ss_pred cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 1234459999999999999999999999999999999999999944 455544
No 130
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.51 E-value=2.1e-14 Score=119.36 Aligned_cols=95 Identities=14% Similarity=0.049 Sum_probs=77.8
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------Eec-CCCHHHHHHHHHHcCC
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IYP-GPKTTHFESLKKATGI 232 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~~-~~k~~~~~~~~~~~~~ 232 (280)
..+.++||+.++|+.|+++ ++++|+||+ ....++..++++|+..+|.... ++. .+++.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDT-FYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCC-cHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 4567899999999999999 999999999 8999999999999998886421 111 1334445666777777
Q ss_pred CCCcEEEEeCCcCCcccccccCceEE
Q psy8911 233 EYKDMVFFDDEERNSHDVSPLGVTCI 258 (280)
Q Consensus 233 ~~~~~l~igD~~~di~~a~~aG~~~i 258 (280)
.+++|+||||+.+|+.+++++|+.+.
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 88999999999999999999998553
No 131
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.51 E-value=3.4e-14 Score=112.81 Aligned_cols=90 Identities=20% Similarity=0.277 Sum_probs=78.9
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------ChhHHHHHHHHhCCC
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------KTTHFANLKKATGIE 80 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------~~~~~~~~~~~~g~~ 80 (280)
+.....++||+.++|+.|+++|++++|+||++. ..++..++.+ +..+|+ .+++++ +...|+.+++++|++
T Consensus 59 ~~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~-l~~~f~--~i~~~~~~~~Kp~~~~~~~~~~~~~~~ 134 (154)
T TIGR01549 59 YDAEEAYIRGAADLLKRLKEAGIKLGIISNGSL-RAQKLLLRKH-LGDYFD--LILGSDEFGAKPEPEIFLAALESLGLP 134 (154)
T ss_pred cchhheeccCHHHHHHHHHHCcCeEEEEeCCch-HHHHHHHHHH-HHhcCc--EEEecCCCCCCcCHHHHHHHHHHcCCC
Confidence 345667889999999999999999999999999 8899999988 889999 555443 234499999999999
Q ss_pred CccEEEEeCCcccccccccCC
Q psy8911 81 YKDMVFFDDEERNSHDVSPLG 101 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G 101 (280)
| +|+||||+..|+++|+++|
T Consensus 135 ~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 135 P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred C-CEEEEeCCHHHHHHHHHcc
Confidence 9 9999999999999999987
No 132
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.50 E-value=2.1e-14 Score=110.56 Aligned_cols=85 Identities=27% Similarity=0.428 Sum_probs=74.6
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCC-CchHHHHHHHhhcC-------ccccccccceecC---CChhHHHHHHHHhC--
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRT-SEIQGAQQLLDLFN-------WNQYFDHKQIFPG---QKTTHFANLKKATG-- 78 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~~~~~~~l~~~~-------l~~~fd~~~i~~~---~~~~~~~~~~~~~g-- 78 (280)
++|||+.++|+.|+++|++++|+||+ +. ..+...++.++ +.++|+ .++++ +++..|+.+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~-~~~~~~l~~~~~~~~i~~l~~~f~--~~~~~~~~pkp~~~~~a~~~lg~~ 105 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDP-HVAYELLKIFEDFGIIFPLAEYFD--PLTIGYWLPKSPRLVEIALKLNGV 105 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCH-HHHHHHHHhccccccchhhHhhhh--hhhhcCCCcHHHHHHHHHHHhcCC
Confidence 48999999999999999999999999 66 88888899988 899999 66655 33445999999999
Q ss_pred CCCccEEEEeCCccccccccc
Q psy8911 79 IEYKDMVFFDDEERNSHDVSP 99 (280)
Q Consensus 79 ~~p~~~l~v~D~~~~i~aa~~ 99 (280)
+.|++|+||||+..|+++.++
T Consensus 106 ~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 106 LKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
No 133
>KOG3109|consensus
Probab=99.49 E-value=1.6e-13 Score=111.23 Aligned_cols=95 Identities=25% Similarity=0.387 Sum_probs=85.6
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----------CCCHHHHHHHHHHcCC
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----------GPKTTHFESLKKATGI 232 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----------~~k~~~~~~~~~~~~~ 232 (280)
+++=+-.+++|-.|+.++ ..+.||+ .+.++.++|+.+||.++|+.+++.. +|.++.|+.+++..|+
T Consensus 99 LkPD~~LRnlLL~l~~r~--k~~FTNa-~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi 175 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR--KWIFTNA-YKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI 175 (244)
T ss_pred cCCCHHHHHHHHhCcccc--EEEecCC-cHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence 677778899999998885 8899999 9999999999999999999875543 2566889999999999
Q ss_pred C-CCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 233 E-YKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 233 ~-~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
+ |.+++||+||.++|++|++.|+.+++|.
T Consensus 176 ~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 176 DSPRNTYFFDDSERNIQTAKEVGLKTVLVG 205 (244)
T ss_pred CCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence 8 9999999999999999999999999996
No 134
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.48 E-value=6.3e-14 Score=115.99 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=76.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC------hhHHHHHHHHhCCCCccEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK------TTHFANLKKATGIEYKDMV 85 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~------~~~~~~~~~~~g~~p~~~l 85 (280)
++.+++.++|+.|+++|++++|+||++. ..++..++.+|+.++|+ .++++++ +..|..+++++|++|++|+
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i 182 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPR-KDAAKFLTTHGLEILFP--VQIWMEDCPPKPNPEPLILAAKALGVEACHAA 182 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHHcCchhhCC--EEEeecCCCCCcCHHHHHHHHHHhCcCcccEE
Confidence 4556679999999999999999999999 89999999999999999 6665432 3349999999999999999
Q ss_pred EEeCCcccccccccC
Q psy8911 86 FFDDEERNSHDVSPL 100 (280)
Q Consensus 86 ~v~D~~~~i~aa~~~ 100 (280)
||||+.+|+++|+++
T Consensus 183 ~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 183 MVGDTVDDIITGRKA 197 (197)
T ss_pred EEeCCHHHHHHHHhC
Confidence 999999999999875
No 135
>KOG3085|consensus
Probab=99.48 E-value=9.6e-14 Score=115.99 Aligned_cols=101 Identities=21% Similarity=0.303 Sum_probs=88.3
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.....+++.++++.|+++|+.++++||. .. ..+..+..+|+..|||.+..+ .+|+|.+|+.+++++++.|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~-d~-r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNF-DD-RLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCC-cH-HHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 5677889999999999999999999999 43 345889999999999976432 3588899999999999999999
Q ss_pred EEEeCCcCC-cccccccCceEEEECCCCC
Q psy8911 238 VFFDDEERN-SHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 238 l~igD~~~d-i~~a~~aG~~~i~v~~g~~ 265 (280)
++|||+..+ +++|+++||++++|-+..+
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEEccccc
Confidence 999999985 9999999999999986544
No 136
>KOG2914|consensus
Probab=99.47 E-value=6.3e-14 Score=116.60 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=88.1
Q ss_pred cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcC-ccccccccceec--C-------CChhHHHHHHH
Q psy8911 6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN-WNQYFDHKQIFP--G-------QKTTHFANLKK 75 (280)
Q Consensus 6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~-l~~~fd~~~i~~--~-------~~~~~~~~~~~ 75 (280)
+.-....+.||+..+++.|+.+|++++++|+++. ...+..++.++ +...|+ .++. + ++++.|..+++
T Consensus 86 ~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~-~~~~~k~~~~~~~~~~f~--~~v~~d~~~v~~gKP~Pdi~l~A~~ 162 (222)
T KOG2914|consen 86 RLFMNSILMPGAEKLVNHLKNNGIPVALATSSTS-ASFELKISRHEDIFKNFS--HVVLGDDPEVKNGKPDPDIYLKAAK 162 (222)
T ss_pred HhccccccCCcHHHHHHHHHhCCCCeeEEecCCc-ccHHHHHHHhhHHHHhcC--CCeecCCccccCCCCCchHHHHHHH
Confidence 4455678999999999999999999999999999 88888888887 888888 3333 2 23344999999
Q ss_pred HhCCCC-ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 76 ATGIEY-KDMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 76 ~~g~~p-~~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
++|.+| +.|++|+|++.++++|+++||++|++++
T Consensus 163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 999999 9999999999999999999999999987
No 137
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1.3e-12 Score=111.84 Aligned_cols=199 Identities=17% Similarity=0.173 Sum_probs=132.3
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHH---HHHhh-cCccccccccceecCCChhHHHHHHHHhCCCCccEEE
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ---QLLDL-FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVF 86 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~---~~l~~-~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~ 86 (280)
-+++||+.++|+.|+++|+++.++||++. ...+ ..|+. .++..-.+ .|+.|.... ...+++. .++..|.+
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~-~s~~~~~~~L~~~~~~~~~~~--~i~TS~~at--~~~l~~~-~~~~kv~v 96 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNST-RSREVVAARLSSLGGVDVTPD--DIVTSGDAT--ADYLAKQ-KPGKKVYV 96 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCC-CCHHHHHHHHHhhcCCCCCHH--HeecHHHHH--HHHHHhh-CCCCEEEE
Confidence 57899999999999999999999999988 4444 33444 45555666 677665542 2222222 23388999
Q ss_pred EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911 87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY 166 (280)
Q Consensus 87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (280)
||. ....+....+|+..+.-.... .+.++..-+|.++.
T Consensus 97 iG~-~~l~~~l~~~G~~~~~~~~~~-------------~~d~Vv~g~d~~~~---------------------------- 134 (269)
T COG0647 97 IGE-EGLKEELEGAGFELVDEEEPA-------------RVDAVVVGLDRTLT---------------------------- 134 (269)
T ss_pred ECC-cchHHHHHhCCcEEeccCCCC-------------cccEEEEecCCCCC----------------------------
Confidence 994 555688888998877431110 03455555554442
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCCcHHH------------HHHHHhhC-CCccccccceEecCCCHHHHHHHHHHcCCC
Q psy8911 167 YRGVPEILRYLKENKCLVAAASRTSEILH------------AKQILNLI-NLNQYFSNKEIYPGPKTTHFESLKKATGIE 233 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~------------~~~~l~~~-gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 233 (280)
|....+.+..+++. ...|+||. .... ....++.+ |-.. .+..+|.+.+|+.++++++.+
T Consensus 135 ~e~l~~a~~~i~~g--~~fI~tNp-D~~~p~~~g~~pgaGai~~~~~~~tg~~~-----~~~GKP~~~i~~~al~~~~~~ 206 (269)
T COG0647 135 YEKLAEALLAIAAG--APFIATNP-DLTVPTERGLRPGAGAIAALLEQATGREP-----TVIGKPSPAIYEAALEKLGLD 206 (269)
T ss_pred HHHHHHHHHHHHcC--CcEEEeCC-CccccCCCCCccCcHHHHHHHHHhhCCcc-----cccCCCCHHHHHHHHHHhCCC
Confidence 11233344444433 56677776 3211 11112211 1122 134578899999999999999
Q ss_pred CCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911 234 YKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 234 ~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~ 265 (280)
+++++||||+.. ||..|+++||.+++|..|.+
T Consensus 207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~ 239 (269)
T COG0647 207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVS 239 (269)
T ss_pred cccEEEEcCCchhhHHHHHHcCCCEEEEccCCC
Confidence 999999999988 99999999999999999986
No 138
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.47 E-value=1e-13 Score=111.52 Aligned_cols=90 Identities=16% Similarity=0.252 Sum_probs=74.5
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCch-----------HHHHHHHhhcCccccccccceecC-------CChhHHHHHH
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEI-----------QGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLK 74 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-----------~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~ 74 (280)
+|||+.++|+.|+++|++++|+||++.. ..++.+++.+|+.. + .++++ ++.+.|+.++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~--~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--Q--VLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--E--EEEecCCCCCCCCccHHHHHHH
Confidence 6999999999999999999999999861 14678899999843 3 23222 2234599999
Q ss_pred HHhC--CCCccEEEEeCCc--------ccccccccCCCeEEE
Q psy8911 75 KATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTCIL 106 (280)
Q Consensus 75 ~~~g--~~p~~~l~v~D~~--------~~i~aa~~~G~~~i~ 106 (280)
+++| ++|++|+||||+. .|+++|+++|+.+++
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 9999 9999999999996 599999999999874
No 139
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.46 E-value=1e-13 Score=116.45 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----e----ec------CCChhHHH
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----I----FP------GQKTTHFA 71 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i----~~------~~~~~~~~ 71 (280)
....++++||+.++|+.|+++|++++|+||+.. ..++.+++.+++..+|+... + .. .++...|+
T Consensus 80 ~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 158 (219)
T TIGR00338 80 VRENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLL 158 (219)
T ss_pred HHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHH
Confidence 334578999999999999999999999999999 89999999999999886211 1 11 12455699
Q ss_pred HHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911 72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
.++++++++|++|+||||+.+|+.+|+++|+..++
T Consensus 159 ~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 159 ILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred HHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence 99999999999999999999999999999998643
No 140
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.46 E-value=6e-13 Score=113.69 Aligned_cols=127 Identities=10% Similarity=-0.043 Sum_probs=96.3
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH--HHHhhC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK--QILNLI 203 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~--~~l~~~ 203 (280)
.+.+.||+|||||+ ...++||+.++|+.|+++|++++++||+ .+.... ..|+++
T Consensus 8 ~~~~~~D~dG~l~~-----------------------~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIID-----------------------GNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEeccccccc-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHC
Confidence 46889999999985 2458999999999999999999999999 666655 789999
Q ss_pred CCcc-ccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCc---------eEEEECCC----CCHHHH
Q psy8911 204 NLNQ-YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV---------TCIHVKKG----MSHAVL 269 (280)
Q Consensus 204 gl~~-~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~---------~~i~v~~g----~~~~~~ 269 (280)
|+.. +|+.+.....-....+..++++++++|+++++|||+..|++....+|. .++.+... ++.+.+
T Consensus 64 gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~ 143 (242)
T TIGR01459 64 GINADLPEMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRSENEKLDLDEF 143 (242)
T ss_pred CCCccccceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCCCcccCCHHHH
Confidence 9997 898754432222356777778889999999999999998876655443 23444432 556666
Q ss_pred HHHHHHH
Q psy8911 270 QKGLKQW 276 (280)
Q Consensus 270 ~~~~~~~ 276 (280)
+..+...
T Consensus 144 ~~~l~~l 150 (242)
T TIGR01459 144 DELFAPI 150 (242)
T ss_pred HHHHHHH
Confidence 6666543
No 141
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.45 E-value=1.3e-13 Score=114.08 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=80.6
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc--ceecC----CChhHHHHHHHHhCCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK--QIFPG----QKTTHFANLKKATGIEYK 82 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~--~i~~~----~~~~~~~~~~~~~g~~p~ 82 (280)
..+.+|||+.++|+.|+++ ++++++||++. ......++.+++.++|+.. .++++ .++..|+.+++++| |+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~-~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 71 RYLSAYDDALDVINKLKED-YDFVAVTALGD-SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred HhccCCCCHHHHHHHHHhc-CCEEEEeCCcc-chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 4577999999999999997 57888999887 6666677888887655310 34332 24455999999999 89
Q ss_pred cEEEEeCCcccccccccC--CCeEEEEcCCC
Q psy8911 83 DMVFFDDEERNSHDVSPL--GVTCILVEDGM 111 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~--G~~~i~v~~~~ 111 (280)
+|+||||+..|+++|+++ |+++|++.++.
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 999999999999999999 99999997764
No 142
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.43 E-value=7.2e-12 Score=107.46 Aligned_cols=198 Identities=12% Similarity=0.150 Sum_probs=124.6
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCC---chHHHHHHHhhcCccccccccceecCCChh-HHHHHHHHhCCCCccEEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTS---EIQGAQQLLDLFNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v 87 (280)
.++|++.++|+.|+++|++++++||++ . ......++.+|+....+ .|+++...- .|.. +.+ ....+.++
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~-~~~~~~l~~~g~~~~~~--~iit~~~~~~~~l~---~~~-~~~~v~~l 89 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTP-ESVAEMLASFDIPATLE--TVFTASMATADYMN---DLK-LEKTVYVI 89 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCH-HHHHHHHHHcCCCCChh--hEeeHHHHHHHHHH---hcC-CCCEEEEE
Confidence 468899999999999999999999843 4 55666788888876666 676664332 2332 221 23457777
Q ss_pred eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911 88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY 167 (280)
Q Consensus 88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (280)
|.. .-.+.....|.... . .-+..++...| ....|
T Consensus 90 g~~-~l~~~l~~~g~~~~----~-------------~~~~~Vvvg~~----------------------------~~~~y 123 (249)
T TIGR01457 90 GEE-GLKEAIKEAGYVED----K-------------EKPDYVVVGLD----------------------------RQIDY 123 (249)
T ss_pred cCh-hHHHHHHHcCCEec----C-------------CCCCEEEEeCC----------------------------CCCCH
Confidence 663 12333344554311 0 00122222222 11244
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHH--HH-hhCCCccccccc-----eEecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQ--IL-NLINLNQYFSNK-----EIYPGPKTTHFESLKKATGIEYKDMVF 239 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~--~l-~~~gl~~~f~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~ 239 (280)
+.....+..|+ +|.+ .|+||. ....... .+ ..-.+...+... ....+|++..|..++++++++|++++|
T Consensus 124 ~~l~~a~~~l~-~g~~-~i~tN~-D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 200 (249)
T TIGR01457 124 EKFATATLAIR-KGAH-FIGTNG-DLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM 200 (249)
T ss_pred HHHHHHHHHHH-CCCe-EEEECC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence 55566666664 5777 888998 4332210 00 000111222211 123468889999999999999999999
Q ss_pred EeCCc-CCcccccccCceEEEECCCCC
Q psy8911 240 FDDEE-RNSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 240 igD~~-~di~~a~~aG~~~i~v~~g~~ 265 (280)
|||+. .||..|+++|+++++|.+|..
T Consensus 201 VGD~~~~Di~~a~~~G~~~v~v~~G~~ 227 (249)
T TIGR01457 201 VGDNYLTDIRAGIDAGIDTLLVHTGVT 227 (249)
T ss_pred ECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence 99997 799999999999999998874
No 143
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.43 E-value=3.6e-13 Score=111.45 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=84.6
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec------C---------CChhHHHHH
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP------G---------QKTTHFANL 73 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~------~---------~~~~~~~~~ 73 (280)
.+++++||+.++|+.|+++|++++|+||+.. ..++.+++.+|+..+|+...... + .+...+..+
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIM-CLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 4578999999999999999999999999999 89999999999988886322111 0 111348888
Q ss_pred HHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 74 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 74 ~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++++|++|++|+||||+.+|+.+|+++|+..+..+++
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 8999999999999999999999999999988776554
No 144
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.42 E-value=3e-13 Score=119.13 Aligned_cols=98 Identities=15% Similarity=0.215 Sum_probs=86.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCC------------C--hhHHHHHH
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQ------------K--TTHFANLK 74 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~------------~--~~~~~~~~ 74 (280)
...++||+.++|+.|+++|++++++||++. ...+..++.+++.+ +|+ .+++.+ + ...+..++
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~-~~~~~~l~~l~~~~~~f~--~i~~~~~~~~~~~~~~~~kp~p~~~~~~l 261 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDG-VCEEDTVEWLRQTDIWFD--DLIGRPPDMHFQREQGDKRPDDVVKEEIF 261 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCCh-hhHHHHHHHHHHcCCchh--hhhCCcchhhhcccCCCCCCcHHHHHHHH
Confidence 357899999999999999999999999999 89999999999997 999 454443 1 22388999
Q ss_pred HHhCC-CCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 75 KATGI-EYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 75 ~~~g~-~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++++. +|++|++|||+..|+++|+++|+.+++|.+|
T Consensus 262 ~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 262 WEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 99988 6899999999999999999999999999765
No 145
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.38 E-value=1.3e-12 Score=121.74 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=89.0
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCcH-----------
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI----------- 193 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~~----------- 193 (280)
.+...||+||||+...... .+-.....++ +|||+.+.|+.|+++||+++|+||. ..
T Consensus 168 ~Kia~fD~DGTLi~t~sg~-----------~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ-~gI~~G~~~~~~~ 235 (526)
T TIGR01663 168 EKIAGFDLDGTIIKTKSGK-----------VFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQ-GGIARGKINADDF 235 (526)
T ss_pred CcEEEEECCCCccccCCCc-----------cCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECC-cccccCcccHHHH
Confidence 4688999999998532110 0001122344 6999999999999999999999998 44
Q ss_pred -HHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcC----CCCCcEEEEeCCcCCcccccccCc
Q psy8911 194 -LHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATG----IEYKDMVFFDDEERNSHDVSPLGV 255 (280)
Q Consensus 194 -~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~----~~~~~~l~igD~~~di~~a~~aG~ 255 (280)
..+..+++++|+. |+.+... .+|++.++..++++++ +++++++||||+..|+++++++|-
T Consensus 236 ~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 236 KAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 3578889999985 6643321 2477899999999985 899999999999999998887775
No 146
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.38 E-value=2.3e-13 Score=110.31 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=73.6
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
.+.++||+.++|+ +++|+||+ ....++..++++|+.+||+.+.+. .+|+|+.|+.+++++|++|++|
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 4679999999998 38999999 899999999999999999975332 2477899999999999999999
Q ss_pred EEEeCCcCCccccccc
Q psy8911 238 VFFDDEERNSHDVSPL 253 (280)
Q Consensus 238 l~igD~~~di~~a~~a 253 (280)
+||||+.+|+++|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999874
No 147
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.38 E-value=1.7e-13 Score=111.12 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=71.4
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~ 82 (280)
.+.++||+.++|+ +++|+||++. ..++..++++++.++|| .++++++ +..|+.+++++|++|+
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~ 157 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASH-WAFDQFAQQAGLPWYFD--RAFSVDTVRAYKPDPVVYELVFDTVGLPPD 157 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCH-HHHHHHHHHCCCHHHHh--hhccHhhcCCCCCCHHHHHHHHHHHCCCHH
Confidence 5679999999998 4899999999 89999999999999999 5665533 2339999999999999
Q ss_pred cEEEEeCCcccccccccC
Q psy8911 83 DMVFFDDEERNSHDVSPL 100 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~ 100 (280)
+|+||||+.+|+.+|+++
T Consensus 158 ~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 158 RVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HeEeEecChhhHHHHhcC
Confidence 999999999999999874
No 148
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.38 E-value=1.5e-12 Score=100.11 Aligned_cols=96 Identities=21% Similarity=0.357 Sum_probs=84.6
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-----------------------C
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-----------------------Q 65 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-----------------------~ 65 (280)
...+++|++.++|+.|+++|++++|+||++. ..++..++.+++..+|+ .++++ +
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDDYFD--PVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCchhhh--heeccchhhhhcccccccccccccccCCC
Confidence 3468999999999999999999999999999 89999999999988888 44432 2
Q ss_pred ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911 66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
+...+..+++.++..++++++|||+..|+++|+++|++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 334489999999999999999999999999999999999874
No 149
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.37 E-value=2.6e-12 Score=109.35 Aligned_cols=209 Identities=12% Similarity=0.062 Sum_probs=121.6
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhh-cCccccccccceecCCChhH-HHHHHHHhCCCCccEEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDL-FNWNQYFDHKQIFPGQKTTH-FANLKKATGIEYKDMVFF 87 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~-~~l~~~fd~~~i~~~~~~~~-~~~~~~~~g~~p~~~l~v 87 (280)
.++|++.+.|+.|+++|+++.++||++. +......+.. +++.--.+ .++.+..... |.. ++. +...++++
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits~~~~~~~l~--~~~--~~~~v~v~ 87 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITSGSVTKDLLR--QRF--EGEKVYVI 87 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeHHHHHHHHHH--HhC--CCCEEEEE
Confidence 5699999999999999999999998873 1222223444 67654455 6766654432 332 221 23457778
Q ss_pred eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911 88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY 167 (280)
Q Consensus 88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (280)
|.. .-.+..+..|...-+..... .. ..-..+..++++.|.++. |
T Consensus 88 G~~-~~~~~l~~~g~~~~~~~~~~-~~------~~~~~~~~vv~~~~~~~~----------------------------~ 131 (236)
T TIGR01460 88 GVG-ELRESLEGLGFRNDFFDDID-HL------AIEKIPAAVIVGEPSDFS----------------------------Y 131 (236)
T ss_pred CCH-HHHHHHHHcCCcCcccCccc-cc------ccCCCCeEEEECCCCCcC----------------------------H
Confidence 753 23445556665420011000 00 000112344555443321 1
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc--------eEecCCCHHHHHHHHHHcCCCCCcE-E
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK--------EIYPGPKTTHFESLKKATGIEYKDM-V 238 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~--------~~~~~~k~~~~~~~~~~~~~~~~~~-l 238 (280)
.....+...++ +|-...++||.+.......-....+...+|+.+ ....+|++..|+.++++++++++++ +
T Consensus 132 ~~~~~a~~~l~-~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 210 (236)
T TIGR01460 132 DELAKAAYLLA-EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDV 210 (236)
T ss_pred HHHHHHHHHHh-CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceE
Confidence 11122222333 442466778862111111112334455554421 1244688999999999999999998 9
Q ss_pred EEeCCc-CCcccccccCceEEEECCC
Q psy8911 239 FFDDEE-RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 239 ~igD~~-~di~~a~~aG~~~i~v~~g 263 (280)
||||+. .||.+|+++|+++++|.+|
T Consensus 211 ~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 211 MVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred EECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999 7999999999999999875
No 150
>KOG3109|consensus
Probab=99.37 E-value=1.1e-12 Score=106.37 Aligned_cols=96 Identities=23% Similarity=0.343 Sum_probs=84.8
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-----------ceecCCChhHHHHHHHHhCC
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-----------QIFPGQKTTHFANLKKATGI 79 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-----------~i~~~~~~~~~~~~~~~~g~ 79 (280)
++|-+-.+.+|-.|++++ .++.||++. .++.++|+++|+.++|+.+ .++|.+.+..|..+++..|+
T Consensus 99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi 175 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI 175 (244)
T ss_pred cCCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence 778888999999999876 899999999 9999999999999999932 23334455669999999999
Q ss_pred C-CccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 80 E-YKDMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
+ |.+|+|||||..||++|++.||+++++..
T Consensus 176 ~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 176 DSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred CCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 8 99999999999999999999999999854
No 151
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.37 E-value=4.2e-13 Score=108.80 Aligned_cols=91 Identities=14% Similarity=0.160 Sum_probs=75.5
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------Ee---------cCCCHHHHH
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IY---------PGPKTTHFE 224 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~---------~~~k~~~~~ 224 (280)
..+.++||+.++|+.++++|++++|+|++ ....++..++++|+..+|.... .+ ...|...+.
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~-~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGG-FDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 45678999999999999999999999999 8899999999999998775321 11 013446688
Q ss_pred HHHHHcCCCCCcEEEEeCCcCCccccccc
Q psy8911 225 SLKKATGIEYKDMVFFDDEERNSHDVSPL 253 (280)
Q Consensus 225 ~~~~~~~~~~~~~l~igD~~~di~~a~~a 253 (280)
.++++.+++++++++|||+.+|+.+++.+
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88899999999999999999999888754
No 152
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.37 E-value=1.2e-12 Score=110.78 Aligned_cols=97 Identities=11% Similarity=0.121 Sum_probs=81.2
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCC----CchHHHHHHHhhcCccccccccceecCCCh-----hHHHHHHHHh
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRT----SEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-----THFANLKKAT 77 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~----~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-----~~~~~~~~~~ 77 (280)
......+++++.++|++|+++|++++++||+ .. ..++.+++.+|+.++|+ .+++++.. ... .+++++
T Consensus 109 ~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~-~~a~~ll~~lGi~~~f~--~i~~~d~~~~~Kp~~~-~~l~~~ 184 (237)
T TIGR01672 109 WDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTD-TVSKTLAKNFHIPAMNP--VIFAGDKPGQYQYTKT-QWIQDK 184 (237)
T ss_pred cccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCH-HHHHHHHHHhCCchhee--EEECCCCCCCCCCCHH-HHHHhC
Confidence 3455678888999999999999999999998 65 68889999999999999 77776442 234 456677
Q ss_pred CCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
|+ ++||||+.+|+.+|+++|+++|.+.++.
T Consensus 185 ~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 185 NI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred CC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 76 8999999999999999999999997664
No 153
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.36 E-value=6.1e-13 Score=111.58 Aligned_cols=92 Identities=11% Similarity=0.054 Sum_probs=73.8
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc--ceE------ecCCCHHHH----------H
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN--KEI------YPGPKTTHF----------E 224 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~--~~~------~~~~k~~~~----------~ 224 (280)
.+.++||+.++|+.|+++|++++|+|++ ....++.++++++..++|.. ..+ ...|.+..+ .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~-~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGG-MDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCC-cHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 5789999999999999999999999999 88899999998865555421 111 112444333 4
Q ss_pred HHHHHcCCCCCcEEEEeCCcCCcccccccCc
Q psy8911 225 SLKKATGIEYKDMVFFDDEERNSHDVSPLGV 255 (280)
Q Consensus 225 ~~~~~~~~~~~~~l~igD~~~di~~a~~aG~ 255 (280)
.++++++..+++++||||+.+|+.+|++||+
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 6778888899999999999999999999998
No 154
>PRK10444 UMP phosphatase; Provisional
Probab=99.35 E-value=2.7e-11 Score=103.67 Aligned_cols=194 Identities=12% Similarity=0.054 Sum_probs=116.2
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChh-HHHHHHHHhCCCCccEEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v 87 (280)
.++||+.++|+.|+++|+++.++||.+. ...+.+.++ +|+.---+ .++++.... .|.. +. ....+.++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~-~~~~~~~~~l~~~G~~~~~~--~i~ts~~~~~~~L~---~~--~~~~v~~~ 88 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPS-QTGQDLANRFATAGVDVPDS--VFYTSAMATADFLR---RQ--EGKKAYVI 88 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCC-CCHHHHHHHHHHcCCCCCHh--hEecHHHHHHHHHH---hC--CCCEEEEE
Confidence 6799999999999999999999999988 555554444 56532233 565544332 1332 21 23457777
Q ss_pred eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911 88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY 167 (280)
Q Consensus 88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (280)
|.. .=.+.....|.... +. -+..++...|.++ -|
T Consensus 89 g~~-~l~~~l~~~g~~~~---~~--------------~~~~Vvvg~~~~~----------------------------~~ 122 (248)
T PRK10444 89 GEG-ALIHELYKAGFTIT---DI--------------NPDFVIVGETRSY----------------------------NW 122 (248)
T ss_pred cCH-HHHHHHHHCcCEec---CC--------------CCCEEEEeCCCCC----------------------------CH
Confidence 762 11222234454421 00 0123333333221 11
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-------ccccc-----ceEecCCCHHHHHHHHHHcCCCCC
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-------QYFSN-----KEIYPGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-------~~f~~-----~~~~~~~k~~~~~~~~~~~~~~~~ 235 (280)
.........++ +|. ..|+||. ... .-|+. ..++. .....+|+++.|..++++++++|+
T Consensus 123 ~~l~~a~~~l~-~g~-~~i~~n~-D~~-------~~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~ 192 (248)
T PRK10444 123 DMMHKAAYFVA-NGA-RFIATNP-DTH-------GRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSE 192 (248)
T ss_pred HHHHHHHHHHH-CCC-EEEEECC-CCC-------CCCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcc
Confidence 12222233333 454 4778886 331 01111 01111 112346889999999999999999
Q ss_pred cEEEEeCCc-CCcccccccCceEEEECCCCC-HHHH
Q psy8911 236 DMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVL 269 (280)
Q Consensus 236 ~~l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~ 269 (280)
+|+||||+. .|+.+|+++|+++++|.+|.. .+.+
T Consensus 193 ~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l 228 (248)
T PRK10444 193 ETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDI 228 (248)
T ss_pred cEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHH
Confidence 999999997 799999999999999999874 4444
No 155
>PTZ00445 p36-lilke protein; Provisional
Probab=99.35 E-value=1.8e-12 Score=105.56 Aligned_cols=132 Identities=12% Similarity=0.150 Sum_probs=92.0
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH----------
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL---------- 194 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~---------- 194 (280)
-.+.+.+|+|.||++.+....+.+.. -..... ..+-|..+.+++.|++.|++++|+|=++...
T Consensus 42 GIk~Va~D~DnTlI~~HsgG~~~~~~-----~~~~~~--~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~I 114 (219)
T PTZ00445 42 GIKVIASDFDLTMITKHSGGYIDPDN-----DDIRVL--TSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYI 114 (219)
T ss_pred CCeEEEecchhhhhhhhcccccCCCc-----chhhhh--ccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCccee
Confidence 34788999999998754443220000 000011 2355889999999999999999999984322
Q ss_pred ----HHHHHHhhCCCc----cccccc-------e-----EecCCCHHH--H--HHHHHHcCCCCCcEEEEeCCcCCcccc
Q psy8911 195 ----HAKQILNLINLN----QYFSNK-------E-----IYPGPKTTH--F--ESLKKATGIEYKDMVFFDDEERNSHDV 250 (280)
Q Consensus 195 ----~~~~~l~~~gl~----~~f~~~-------~-----~~~~~k~~~--~--~~~~~~~~~~~~~~l~igD~~~di~~a 250 (280)
.++..|++-+-+ ..+.+. . --.+|.+.. | +.++++.|++|++|+||+|+..|+++|
T Consensus 115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA 194 (219)
T PTZ00445 115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA 194 (219)
T ss_pred chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH
Confidence 567777754332 222210 0 001255555 6 999999999999999999999999999
Q ss_pred cccCceEEEECCC
Q psy8911 251 SPLGVTCIHVKKG 263 (280)
Q Consensus 251 ~~aG~~~i~v~~g 263 (280)
+++|+++++++.+
T Consensus 195 ~~lGi~ai~f~~~ 207 (219)
T PTZ00445 195 LKEGYIALHVTGN 207 (219)
T ss_pred HHCCCEEEEcCCh
Confidence 9999999999853
No 156
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.34 E-value=9.1e-13 Score=109.95 Aligned_cols=98 Identities=18% Similarity=0.225 Sum_probs=83.9
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-eEe--------------cCCCHHHHHHHHH
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EIY--------------PGPKTTHFESLKK 228 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-~~~--------------~~~k~~~~~~~~~ 228 (280)
.+++||+.++++.++++|++++|+|++ ....++.+.+.+|++..+... .+. ...|...+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg-~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGG-FTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCC-hHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 789999999999999999999999999 889999999999999877532 111 1135577899999
Q ss_pred HcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
++|+++++++++||+.+|+..-+.+|...+.-+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 9999999999999999999999999988666443
No 157
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.34 E-value=1.7e-12 Score=99.99 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=95.8
Q ss_pred ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHH-HHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPE-ILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.+.+++++|.||||.|.- -+++.++++++.|.--.- -|+.|.+.|++++|+|+. ....++...+.
T Consensus 6 ~~IkLli~DVDGvLTDG~-------------ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr-~s~ive~Ra~~ 71 (170)
T COG1778 6 KNIKLLILDVDGVLTDGK-------------LYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGR-DSPIVEKRAKD 71 (170)
T ss_pred hhceEEEEeccceeecCe-------------EEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCC-CCHHHHHHHHH
Confidence 356899999999998831 233455655555432222 257789999999999999 78889999999
Q ss_pred CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
||+.++|..+ ..|...|..+++++++.|+++.||||..+|+..-++.|.+++.
T Consensus 72 LGI~~~~qG~----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 72 LGIKHLYQGI----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred cCCceeeech----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 9999999752 4677889999999999999999999999999999999988654
No 158
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.33 E-value=5.8e-12 Score=101.23 Aligned_cols=124 Identities=15% Similarity=0.060 Sum_probs=93.4
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-------------- 191 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~-------------- 191 (280)
.+.+.+|.||||...... + -.......+.||+.+.|..|++.||+++|+||-+
T Consensus 5 ~k~lflDRDGtin~d~~~-y------------v~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~ 71 (181)
T COG0241 5 QKALFLDRDGTINIDKGD-Y------------VDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDK 71 (181)
T ss_pred CcEEEEcCCCceecCCCc-c------------cCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHH
Confidence 468899999999532110 1 1223357789999999999999999999999941
Q ss_pred cHHHHHHHHhhCCCccccccce---------E-ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 192 EILHAKQILNLINLNQYFSNKE---------I-YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 192 ~~~~~~~~l~~~gl~~~f~~~~---------~-~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
........|+..|. -|+.+. + ..+|++.+++.+++++++++++.++|||+..|+++|.++|+..+.+.
T Consensus 72 ~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~ 149 (181)
T COG0241 72 LHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVL 149 (181)
T ss_pred HHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEE
Confidence 12234555666664 233221 1 12488999999999999999999999999999999999999988887
Q ss_pred CCC
Q psy8911 262 KGM 264 (280)
Q Consensus 262 ~g~ 264 (280)
.|.
T Consensus 150 ~~~ 152 (181)
T COG0241 150 TGI 152 (181)
T ss_pred cCc
Confidence 654
No 159
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.33 E-value=4.3e-12 Score=98.91 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=78.6
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh--hHHHHHHHHhCCCCccEEEEeC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT--THFANLKKATGIEYKDMVFFDD 89 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~--~~~~~~~~~~g~~p~~~l~v~D 89 (280)
..=|.+++.+..++++|+++.|+||+.. .....+.+.+++ + .|+...++ ..|.+++++++++|++|+||||
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e-~RV~~~~~~l~v----~--fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKE-SRVARAAEKLGV----P--FIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCH-HHHHhhhhhcCC----c--eeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 3456889999999999999999999999 889999999885 4 44445444 3499999999999999999999
Q ss_pred Cc-ccccccccCCCeEEEEcC
Q psy8911 90 EE-RNSHDVSPLGVTCILVED 109 (280)
Q Consensus 90 ~~-~~i~aa~~~G~~~i~v~~ 109 (280)
.. .||.++..+||++|+|.+
T Consensus 119 qL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 119 QLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred hhhhhhhcccccCcEEEEEEE
Confidence 96 599999999999999954
No 160
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.31 E-value=3.6e-12 Score=102.08 Aligned_cols=142 Identities=11% Similarity=0.008 Sum_probs=101.9
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCee-E--ccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKV-M--DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
+.+++|+|+||+.+.......... ..-.+ . ......+..-||+.++|++|++. +.++|.|++ .+.+++.+++++
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~-~~~yA~~il~~l 78 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDAD-FKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTAS-LEEYADPVLDIL 78 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCc-eEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCC-cHHHHHHHHHHH
Confidence 468999999998653221100000 00000 0 11223467889999999999988 999999999 999999999999
Q ss_pred CCcc-ccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911 204 NLNQ-YFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK 271 (280)
Q Consensus 204 gl~~-~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~ 271 (280)
+... +|+....... .....+.+.++.+|.+++++|+|||++.++..+.++|+.+..........+|.+
T Consensus 79 dp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~ 149 (162)
T TIGR02251 79 DRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLN 149 (162)
T ss_pred CcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHH
Confidence 9876 8876433221 111227777888999999999999999999999999999888876555555544
No 161
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.31 E-value=3.7e-12 Score=101.22 Aligned_cols=86 Identities=9% Similarity=0.173 Sum_probs=77.5
Q ss_pred HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911 20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 99 (280)
Q Consensus 20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~ 99 (280)
+|++|+++|++++|+||++. ..++..++.+|+..+|+ .. .++...++.+++++|++|++|+||||+.+|+.++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~-~~~~~~l~~~gi~~~~~--~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ 110 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKA-KLVEDRCKTLGITHLYQ--GQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEK 110 (154)
T ss_pred HHHHHHHCCCEEEEEECCCC-HHHHHHHHHcCCCEEEe--cc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 89999999999999999999 88999999999999998 33 456667999999999999999999999999999999
Q ss_pred CCCeEEEEcCCC
Q psy8911 100 LGVTCILVEDGM 111 (280)
Q Consensus 100 ~G~~~i~v~~~~ 111 (280)
+|+. +.+.+..
T Consensus 111 ag~~-~~v~~~~ 121 (154)
T TIGR01670 111 VGLS-VAVADAH 121 (154)
T ss_pred CCCe-EecCCcC
Confidence 9997 6665554
No 162
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.30 E-value=5.9e-12 Score=106.41 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=79.4
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCC----chHHHHHHHhhcCc--cccccccceecCCCh---hHHHHHHHHhC
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTS----EIQGAQQLLDLFNW--NQYFDHKQIFPGQKT---THFANLKKATG 78 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~----~~~~~~~~l~~~~l--~~~fd~~~i~~~~~~---~~~~~~~~~~g 78 (280)
.....|+||++++|+.|+++|++++++||.+ . ..++.+++.+|+ .++|+ .+++++.. ... .+++++|
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~-~t~~~Llk~~gip~~~~f~--vil~gd~~~K~~K~-~~l~~~~ 185 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTE-TVSKTLADDFHIPADNMNP--VIFAGDKPGQYTKT-QWLKKKN 185 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccH-HHHHHHHHHcCCCccccee--EEEcCCCCCCCCHH-HHHHhcC
Confidence 4557899999999999999999999999953 4 567778888999 89998 77776532 223 3555666
Q ss_pred CCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+ ++||||+..|+.+|++||+.+|.+.++..
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 5 99999999999999999999999987654
No 163
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.29 E-value=4.1e-12 Score=105.49 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=74.2
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-e-------Ee----cCCCHHHHHHHHHHc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-E-------IY----PGPKTTHFESLKKAT 230 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-~-------~~----~~~k~~~~~~~~~~~ 230 (280)
.+.++||+.++|+.|+++| +++|+|++ ....++.+++++|++.+|... . .+ .++.+......+++.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~-~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDT-FYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCC-hHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 4679999999999999985 99999999 899999999999999888621 1 11 113333344444555
Q ss_pred CCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 231 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
+ .++++|||+.+|+..++.+|+.++...
T Consensus 144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred C---CCEEEEeCCHHHHHHHHhCCCCEEecC
Confidence 5 389999999999999999999988765
No 164
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.28 E-value=7.3e-12 Score=100.68 Aligned_cols=84 Identities=12% Similarity=0.164 Sum_probs=76.0
Q ss_pred HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccc
Q psy8911 19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS 98 (280)
Q Consensus 19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~ 98 (280)
.-++.|+++|++++|+||++. ..++..++.+++..+|+ .+ .+++..|+.+++++|++|++|++|||+.+|+.+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~-~~~~~~l~~lgi~~~f~--~~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~ 115 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKS-GAVRHRAEELKIKRFHE--GI--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMK 115 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCc-HHHHHHHHHCCCcEEEe--cC--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHH
Confidence 357889999999999999999 89999999999999999 44 46667799999999999999999999999999999
Q ss_pred cCCCeEEEE
Q psy8911 99 PLGVTCILV 107 (280)
Q Consensus 99 ~~G~~~i~v 107 (280)
.+|+..+.-
T Consensus 116 ~ag~~~am~ 124 (169)
T TIGR02726 116 RVGLAVAVG 124 (169)
T ss_pred HCCCeEECc
Confidence 999887643
No 165
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.28 E-value=1.3e-11 Score=109.17 Aligned_cols=100 Identities=14% Similarity=0.234 Sum_probs=85.7
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc-C-------ccccccccceecCC-Chh-----------
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-N-------WNQYFDHKQIFPGQ-KTT----------- 68 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-~-------l~~~fd~~~i~~~~-~~~----------- 68 (280)
..+.++||+.++|+.|+++|++++|+||++. ..++.+++.+ + |.+||| .|+++. |++
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~-~yt~~im~~l~g~~~~~~~w~~yFD--~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDY-DYTDKGMKYLLGPFLGEHDWRDYFD--VVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhhCCcccccchHhhCc--EEEeCCCCCcccCCCCceEEE
Confidence 4567899999999999999999999999999 9999999996 7 999999 555432 110
Q ss_pred ------------------------HHHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCCC
Q psy8911 69 ------------------------HFANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDGM 111 (280)
Q Consensus 69 ------------------------~~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~~ 111 (280)
.+....+.+|+.+++++||||+. .||.+|+ .+||++++|.+..
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred eCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 17888999999999999999996 4899998 8999999996654
No 166
>PLN02954 phosphoserine phosphatase
Probab=99.27 E-value=2.2e-11 Score=102.62 Aligned_cols=97 Identities=22% Similarity=0.321 Sum_probs=77.8
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--cccccccee-----------------cCCChhHHH
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQIF-----------------PGQKTTHFA 71 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~i~-----------------~~~~~~~~~ 71 (280)
..++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+. .+|+....+ ...+...++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFR-QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 56899999999999999999999999999 8999999999986 466421111 112334488
Q ss_pred HHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
.+++.+|. ++|+||||+.+|+.+|+++|+.++...++
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~ 198 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG 198 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence 88888875 69999999999999999999987765443
No 167
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.25 E-value=7.1e-12 Score=111.41 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=81.0
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh----cCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL----FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~----~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v 87 (280)
.+|||+.++|+.|+++|++++|+||++. ..+..+++. +++.++|+.+.+...++...++.+++++|+.|++|+||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfi 109 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFI 109 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEE
Confidence 4789999999999999999999999999 899999999 89999999433334456667999999999999999999
Q ss_pred eCCcccccccccCCCe
Q psy8911 88 DDEERNSHDVSPLGVT 103 (280)
Q Consensus 88 ~D~~~~i~aa~~~G~~ 103 (280)
||++.|+.++++++-.
T Consensus 110 dD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 110 DDNPAERANVKITLPV 125 (320)
T ss_pred CCCHHHHHHHHHHCCC
Confidence 9999999999997655
No 168
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.25 E-value=6.7e-12 Score=111.08 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=82.6
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-----ce----e------cCCChhHHH
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-----QI----F------PGQKTTHFA 71 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-----~i----~------~~~~~~~~~ 71 (280)
....++++||+.++|+.|+++|++++|+|++.. ...+.+++.+++...|... .. + ...|...++
T Consensus 176 v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~-~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~ 254 (322)
T PRK11133 176 VRENLPLMPGLTELVLKLQALGWKVAIASGGFT-YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLT 254 (322)
T ss_pred HHHhCCCChhHHHHHHHHHHcCCEEEEEECCcc-hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHH
Confidence 345688999999999999999999999999998 7889999999987654310 11 1 113444599
Q ss_pred HHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911 72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
.+++++|++|++|++|||+.+|+.+++++|+..++
T Consensus 255 ~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 255 RLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 99999999999999999999999999999998776
No 169
>KOG4549|consensus
Probab=99.24 E-value=6.5e-11 Score=87.54 Aligned_cols=121 Identities=31% Similarity=0.416 Sum_probs=102.6
Q ss_pred cceeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
.|++..||+|-|+|+.+++.+. .||........ .++.++..|+.++.+|..|+++|+.++++|+++.++.+...|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfkP~k~~~g-~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCECG-SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEecccccccccccCcc-cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 5788999999999999999887 55554432221 567789999999999999999999999999999999999999999
Q ss_pred CCcc---------ccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCC
Q psy8911 204 NLNQ---------YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERN 246 (280)
Q Consensus 204 gl~~---------~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~d 246 (280)
.+.. .|.++..+++.|..+|..+-+..|+...+..+++|-.++
T Consensus 83 kvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 83 KVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred ccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccccC
Confidence 8764 444555677789999999999999999999999999887
No 170
>KOG2882|consensus
Probab=99.23 E-value=1.1e-10 Score=99.56 Aligned_cols=214 Identities=16% Similarity=0.178 Sum_probs=135.2
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChhH-HHHHHHHhCCCCccEEE
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTTH-FANLKKATGIEYKDMVF 86 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~~-~~~~~~~~g~~p~~~l~ 86 (280)
-.+.||+.|+|..|++.|.++.++||++. ...+...++ +|+.. +....|+++..... |.+-.. ...+.+.+
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNSt-ksr~~y~kK~~~lG~~~-v~e~~i~ssa~~~a~ylk~~~---~~~k~Vyv 111 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNST-KSREQYMKKFAKLGFNS-VKEENIFSSAYAIADYLKKRK---PFGKKVYV 111 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCc-chHHHHHHHHHHhCccc-cCcccccChHHHHHHHHHHhC---cCCCeEEE
Confidence 46899999999999999999999999998 666665544 46544 44345665543322 332221 44566777
Q ss_pred EeCCcccccccccCCCeEEEEcCCCchhhhhccccccc-------cceeEEEecCCCCCCcccccccCcccccCCeeEcc
Q psy8911 87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFI-------ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDA 159 (280)
Q Consensus 87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~-------~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~ 159 (280)
+|-.... +...++|+............ .+...+. -..++++++| .
T Consensus 112 ig~~gi~-~eL~~aG~~~~g~~~~~~~~---~~~~~~~~~~~~d~~VgAVvvg~D------------------------~ 163 (306)
T KOG2882|consen 112 IGEEGIR-EELDEAGFEYFGGGPDGKDT---DGAKSFVLSIGLDPDVGAVVVGYD------------------------E 163 (306)
T ss_pred ecchhhh-HHHHHcCceeecCCCCcccc---cccccchhhcCCCCCCCEEEEecc------------------------c
Confidence 7764433 56677887766554322111 0000100 0123333333 1
Q ss_pred CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc---ccc--------eEecCCCHHHHHHHHH
Q psy8911 160 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---SNK--------EIYPGPKTTHFESLKK 228 (280)
Q Consensus 160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f---~~~--------~~~~~~k~~~~~~~~~ 228 (280)
+ . -|+.....+.+|++-+. +.++||.+.... .....-+..-. ..+ .+.++|.+.++..+++
T Consensus 164 h---f-sy~KL~kA~~yLqnP~c-lflatn~D~~~p---~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~ 235 (306)
T KOG2882|consen 164 H---F-SYPKLMKALNYLQNPGC-LFLATNRDATTP---PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLE 235 (306)
T ss_pred c---c-CHHHHHHHHHHhCCCCc-EEEeccCccccC---CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHH
Confidence 1 1 24556668888998876 679999832111 11111122111 111 2334678889999999
Q ss_pred HcCCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911 229 ATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 229 ~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~ 265 (280)
+++++|++++||||+.. ||.-+++.|+++++|-.|.+
T Consensus 236 ~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~ 273 (306)
T KOG2882|consen 236 KFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVT 273 (306)
T ss_pred HcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence 99999999999999998 99999999999999987764
No 171
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.23 E-value=1.9e-11 Score=101.95 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=78.6
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccccceEecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFF 240 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~i 240 (280)
...++|++.++|+.|+++|++++++|+. ....+....+.+||.+ +|.... +.|.+.+|..+++++++++++++||
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD-~~~~a~~~~~~lgi~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGD-NESTASAIAKQLGIFDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESS-EHHHHHHHHHHTTSCSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecc-cccccccccccccccccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 3478999999999999999999999998 9999999999999976 444322 3566678899999999999999999
Q ss_pred eCCcCCcccccccC
Q psy8911 241 DDEERNSHDVSPLG 254 (280)
Q Consensus 241 gD~~~di~~a~~aG 254 (280)
||+.+|+.++++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999987
No 172
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.22 E-value=1.3e-11 Score=103.95 Aligned_cols=94 Identities=11% Similarity=0.032 Sum_probs=74.7
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--cccccceecCCC-------h----------
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFDHKQIFPGQK-------T---------- 67 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd~~~i~~~~~-------~---------- 67 (280)
+...++++||+.++|+.|+++|++++|+||+.. ..++.+++.+ +.. .+.....+.++. +
T Consensus 69 ~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 69 LLETAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred HHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 445689999999999999999999999999999 8999999987 543 221002222211 0
Q ss_pred hHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911 68 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 102 (280)
Q Consensus 68 ~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~ 102 (280)
.....++++++..+++|+||||+.+|+.+|+++|+
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~ 181 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADK 181 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCc
Confidence 01357889999999999999999999999999999
No 173
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.22 E-value=3.5e-11 Score=98.37 Aligned_cols=87 Identities=13% Similarity=0.210 Sum_probs=72.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------------------------
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------------------------ 65 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------------------------ 65 (280)
.++++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+ .+++++
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGND-FFIDPVLEGIGEKDVFI--EIYSNPASFDNDGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHHcCChhhee--EEeccCceECCCCcEEEecCCCCccCcCCC
Confidence 468999999999999999999999999999 88999999999999999 566421
Q ss_pred ---ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911 66 ---KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 102 (280)
Q Consensus 66 ---~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~ 102 (280)
|...++.+.+.. |++|+||||+.+|+++|+++++
T Consensus 147 g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 147 GCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCc
Confidence 111244444433 8999999999999999999854
No 174
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.21 E-value=7.4e-11 Score=104.46 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=84.3
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-C-------CccccccceEecC-C--------------
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPG-P-------------- 218 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-g-------l~~~f~~~~~~~~-~-------------- 218 (280)
..+...||+.++|+.|+++|++++|+||+ ....++.+++.+ | +.+|||.+++... |
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS-~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNS-DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 45678999999999999999999999999 999999999996 7 8999996543211 1
Q ss_pred --------C-----H------HHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEECC
Q psy8911 219 --------K-----T------THFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKK 262 (280)
Q Consensus 219 --------k-----~------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~~ 262 (280)
. + .....+.+.+++++++++||||.+. ||..++ .+||.+++|..
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 0 0 2267888889999999999999888 999998 79999999965
No 175
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.15 E-value=6.8e-11 Score=98.02 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=82.2
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-ceE-------e--------cCCCHHHHHHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEI-------Y--------PGPKTTHFESLKK 228 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-~~~-------~--------~~~k~~~~~~~~~ 228 (280)
.++||+.++|+.++++|++++|+|++ ....++..++++|++++|.. +.. + ..+|...++++++
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s-~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSAS-LTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 57999999999999999999999999 88899999999999988864 211 0 1134566888899
Q ss_pred HcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
+.++++++|+++|||..|+..++.+|..++..++
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 9999999999999999999999999988766543
No 176
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.14 E-value=7.4e-11 Score=96.50 Aligned_cols=82 Identities=11% Similarity=0.167 Sum_probs=73.0
Q ss_pred HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccc
Q psy8911 19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS 98 (280)
Q Consensus 19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~ 98 (280)
..++.|+++|++++|+||.+. ..++.+++.+++..+|+ . ..++...++.+++++|++|++|+||||+.+|+.+++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~-~~v~~~l~~lgl~~~f~--g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~ 129 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKS-KLVEDRMTTLGITHLYQ--G--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVME 129 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcCCceeec--C--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 578889999999999999999 89999999999988887 2 133456699999999999999999999999999999
Q ss_pred cCCCeEE
Q psy8911 99 PLGVTCI 105 (280)
Q Consensus 99 ~~G~~~i 105 (280)
++|+..+
T Consensus 130 ~aG~~~~ 136 (183)
T PRK09484 130 KVGLSVA 136 (183)
T ss_pred HCCCeEe
Confidence 9999843
No 177
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.13 E-value=1.1e-10 Score=96.91 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=77.1
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccce------ecCC---ChhHHHHHHHHhCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI------FPGQ---KTTHFANLKKATGI 79 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i------~~~~---~~~~~~~~~~~~g~ 79 (280)
..++++||+.++|+.|+++ ++++|+||+.. ..++.+++.+++..+|+.... +.+. .......++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFY-EFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcH-HHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 5678899999999999999 99999999999 899999999999988863211 1111 11235566677778
Q ss_pred CCccEEEEeCCcccccccccCCCeEE
Q psy8911 80 EYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 80 ~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.+++|+||||+.+|+.+++++|+.+.
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 88999999999999999999998543
No 178
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.13 E-value=1.1e-10 Score=97.34 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=76.3
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--cccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v 87 (280)
.-+++|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+.+ +|. .+.+++....|..+++.++++|++|+||
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi~~~~v~a--~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGIFDSIVFA--RVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTSCSEEEEE--SHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccc-ccccccccccccccccccc--cccccccchhHHHHHHHHhcCCCEEEEE
Confidence 357899999999999999999999999998 89999999999955 444 2222333345899999999999999999
Q ss_pred eCCcccccccccCC
Q psy8911 88 DDEERNSHDVSPLG 101 (280)
Q Consensus 88 ~D~~~~i~aa~~~G 101 (280)
||+.+|+.++++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999987
No 179
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.12 E-value=3.4e-10 Score=90.21 Aligned_cols=113 Identities=18% Similarity=0.079 Sum_probs=87.6
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCc--EEEEEcCCC------cHHHHH
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKC--LVAAASRTS------EILHAK 197 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~--~~~i~T~~~------~~~~~~ 197 (280)
.+.++||+|+||.... .-.+.|.+.+.++++++.+. ++.|+||+. ....++
T Consensus 41 ik~li~DkDNTL~~~~---------------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~ 99 (168)
T PF09419_consen 41 IKALIFDKDNTLTPPY---------------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAE 99 (168)
T ss_pred ceEEEEcCCCCCCCCC---------------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHH
Confidence 4788999999997521 23466899999999999876 599999982 256677
Q ss_pred HHHhhCCCccccccceEecCCCHHHHHHHHHHcCC-----CCCcEEEEeCCcC-CcccccccCceEEEECCCC
Q psy8911 198 QILNLINLNQYFSNKEIYPGPKTTHFESLKKATGI-----EYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 198 ~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~-----~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~ 264 (280)
.+-+.+|+. +| .....||..+..+++.++. +|+|+++|||... |+..|..+|+.+|+|+.|.
T Consensus 100 ~~~~~lgIp-vl----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 100 ALEKALGIP-VL----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHHHhhCCc-EE----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 788888855 22 2233555556677777654 5999999999987 9999999999999999885
No 180
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.09 E-value=4.9e-11 Score=102.78 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=81.2
Q ss_pred cCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc--------eecCCChhHHHHHHHHhCCCCccEE
Q psy8911 14 YPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ--------IFPGQKTTHFANLKKATGIEYKDMV 85 (280)
Q Consensus 14 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~--------i~~~~~~~~~~~~~~~~g~~p~~~l 85 (280)
|+++.+.++.|++.+++++++||.+. ......+..+++..+|+.+. +...+.+..|+.+++++|++|++|+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~-~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGR-YYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCC-CCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 78999999999999999999999988 66666677778888887221 1123344459999999999999999
Q ss_pred EEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911 86 FFDDEE-RNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 86 ~v~D~~-~~i~aa~~~G~~~i~v~~~~ 111 (280)
||||+. .|+.+|+++|+++++|.+|.
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~ 227 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGK 227 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCC
Confidence 999996 89999999999999998875
No 181
>PRK08238 hypothetical protein; Validated
Probab=99.09 E-value=2.7e-10 Score=105.84 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=73.3
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCH-HHHHHHHHHcCCCCCcE
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKT-THFESLKKATGIEYKDM 237 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~-~~~~~~~~~~~~~~~~~ 237 (280)
...+++||+.++|++++++|++++|+|++ ....++.+++++|+ |+.+...++ .++ +....+.+.++ .+++
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas-~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~ 142 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATAS-DERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGF 142 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCe
Confidence 34567899999999999999999999999 89999999999998 665432221 111 11233445544 4669
Q ss_pred EEEeCCcCCcccccccCceEEEECCCC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~ 264 (280)
+|+||+.+|+..++.+| +.+.|+.+.
T Consensus 143 ~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 143 DYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred eEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 99999999999999999 777887543
No 182
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=99.08 E-value=2.9e-10 Score=97.56 Aligned_cols=106 Identities=21% Similarity=0.213 Sum_probs=81.7
Q ss_pred ccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHH
Q psy8911 120 RSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQ 198 (280)
Q Consensus 120 ~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~ 198 (280)
...|..++.+.||+||||+.. ..++++- ||+.++|++|+++|++++|+||+ .++.+..
T Consensus 120 ~~~~~~~kvIvFDLDgTLi~~--------------------~~~v~irdPgV~EaL~~LkekGikLaIaTS~-~Re~v~~ 178 (301)
T TIGR01684 120 SKVFEPPHVVVFDLDSTLITD--------------------EEPVRIRDPRIYDSLTELKKRGCILVLWSYG-DRDHVVE 178 (301)
T ss_pred ccccccceEEEEecCCCCcCC--------------------CCccccCCHHHHHHHHHHHHCCCEEEEEECC-CHHHHHH
Confidence 346678899999999999852 2235455 99999999999999999999999 8999999
Q ss_pred HHhhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEeC
Q psy8911 199 ILNLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFDD 242 (280)
Q Consensus 199 ~l~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~igD 242 (280)
.++++||..||+.+.+.+. || |......+++.|+..=.++ .|+|
T Consensus 179 ~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDD 258 (301)
T TIGR01684 179 SMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDD 258 (301)
T ss_pred HHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEecc
Confidence 9999999999986533221 22 2336778888888765555 6677
Q ss_pred CcCC
Q psy8911 243 EERN 246 (280)
Q Consensus 243 ~~~d 246 (280)
=..+
T Consensus 259 l~~N 262 (301)
T TIGR01684 259 LADN 262 (301)
T ss_pred Cccc
Confidence 6654
No 183
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.07 E-value=5.9e-11 Score=103.52 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=75.9
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHH-HHHHhhcCccccccccce--------ecCCChhHHHHHHHHhCCCCcc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGA-QQLLDLFNWNQYFDHKQI--------FPGQKTTHFANLKKATGIEYKD 83 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~-~~~l~~~~l~~~fd~~~i--------~~~~~~~~~~~~~~~~g~~p~~ 83 (280)
.|+++.++++.|+++|+ ++|+||.+. ... ...+...++..+|+.+.. .+.+....|..+++++|++|++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~-~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDP-WHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCC-CCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 48999999999999997 799999887 332 122334466667662211 1123334599999999999999
Q ss_pred EEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911 84 MVFFDDEE-RNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
|+||||+. .||.+|+++||++++|.+|...
T Consensus 222 ~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~ 252 (279)
T TIGR01452 222 TLMVGDRLETDILFGHRCGMTTVLVLSGVSR 252 (279)
T ss_pred EEEECCChHHHHHHHHHcCCcEEEECCCCCC
Confidence 99999995 8999999999999999887653
No 184
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.05 E-value=3.5e-10 Score=93.72 Aligned_cols=97 Identities=15% Similarity=0.243 Sum_probs=80.3
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccce------ecC----------CChhHHHHHH
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI------FPG----------QKTTHFANLK 74 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i------~~~----------~~~~~~~~~~ 74 (280)
..++||+.++|+.++++|++++|+|+++. ..++.+++.+++..+|..... +.+ .+...++..+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~-~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLT-ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 46899999999999999999999999999 899999999999888863111 111 1122377888
Q ss_pred HHhCCCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911 75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCILVE 108 (280)
Q Consensus 75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~ 108 (280)
++.++++++|+++|||..|+..++.+|...+..+
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 8999999999999999999999999998776544
No 185
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.04 E-value=5.9e-10 Score=87.95 Aligned_cols=95 Identities=21% Similarity=0.313 Sum_probs=77.2
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc----Cc----ccccccccee-cCCChhHHHHHHHHhCCC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF----NW----NQYFDHKQIF-PGQKTTHFANLKKATGIE 80 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~----~l----~~~fd~~~i~-~~~~~~~~~~~~~~~g~~ 80 (280)
.-.+||++.+.|+..+++|++++|-|+++. . ++.++-.+ +| .+||| .-+ ...+...|.++++..|++
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV-~-AQkL~Fghs~agdL~~lfsGyfD--ttiG~KrE~~SY~kIa~~iGl~ 176 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSV-K-AQKLFFGHSDAGDLNSLFSGYFD--TTIGKKRESQSYAKIAGDIGLP 176 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCc-h-hHHHhhcccccccHHhhhcceee--ccccccccchhHHHHHHhcCCC
Confidence 457899999999999999999999999999 4 44443322 33 35666 322 223455699999999999
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEc
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVE 108 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~ 108 (280)
|.+++|+.|.+..+.||+.+||+++++.
T Consensus 177 p~eilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 177 PAEILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred chheEEecCCHHHHHHHHhcchheeeee
Confidence 9999999999999999999999999873
No 186
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.03 E-value=2.4e-09 Score=92.17 Aligned_cols=91 Identities=10% Similarity=0.023 Sum_probs=72.8
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc------------eEe-cCC------CH-H
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK------------EIY-PGP------KT-T 221 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~------------~~~-~~~------k~-~ 221 (280)
..+.+.||+.++++.|+++|++++|+|++ ....++..|+++|+.+.+..+ ..+ ++| |. .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G-~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAG-IGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCC-cHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 35789999999999999999999999999 889999999999986444321 111 112 22 3
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCcCCccccccc
Q psy8911 222 HFESLKKATG--IEYKDMVFFDDEERNSHDVSPL 253 (280)
Q Consensus 222 ~~~~~~~~~~--~~~~~~l~igD~~~di~~a~~a 253 (280)
.++..++.++ .++++||+|||+.+|+.+|...
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 3556788888 8999999999999999998775
No 187
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.01 E-value=1.1e-09 Score=94.19 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=83.0
Q ss_pred cceeEEEecCCCCCCccccc----cc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHH
Q psy8911 125 ISNHLSKKLDYTLWPLHVHD----LV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILH 195 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~----~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~ 195 (280)
.+..++||+|+|+++..... .. .++.... .+.. ......++||+.++|+.|+++|++++++||+ . ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv--~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR-~~~~~~~ 150 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWV--QAAQAKPVAGALDFLNYANSKGVKIFYVSNR-SEKEKAA 150 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHH--HcCCCCcCccHHHHHHHHHHCCCeEEEEeCC-CcchHHH
Confidence 35689999999998765321 01 2221111 1111 1235678999999999999999999999998 5 334
Q ss_pred HHHHHhhCCCcccc-ccceEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911 196 AKQILNLINLNQYF-SNKEIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHD 249 (280)
Q Consensus 196 ~~~~l~~~gl~~~f-~~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~ 249 (280)
+...|+.+|+..++ +.+...+ .+|+.....+.+.+++ +++|||+..|+.+
T Consensus 151 T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~ 203 (266)
T TIGR01533 151 TLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFDD 203 (266)
T ss_pred HHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhhh
Confidence 55788999998654 4333322 3677778888887777 8999999999865
No 188
>COG4996 Predicted phosphatase [General function prediction only]
Probab=99.00 E-value=1.4e-09 Score=81.16 Aligned_cols=111 Identities=21% Similarity=0.296 Sum_probs=83.5
Q ss_pred CcccccCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-hHHHHHHH----
Q psy8911 1 DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-THFANLKK---- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-~~~~~~~~---- 75 (280)
|.++|..+.++.+||.++++++++|..|+-++.+|.+.. ..+-..|+.+++..||+++.+-..+-. .+.-++++
T Consensus 30 n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~-~kA~~aLral~~~~yFhy~ViePhP~K~~ML~~llr~i~~ 108 (164)
T COG4996 30 NTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINT 108 (164)
T ss_pred cceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch-HHHHHHHHHhchhhhEEEEEecCCChhHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999 899999999999999994333332222 22333333
Q ss_pred --HhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 76 --ATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 76 --~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
...+.|++++|+||+.-.+......=..+-++..+.+
T Consensus 109 er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~D 147 (164)
T COG4996 109 ERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKD 147 (164)
T ss_pred hhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecc
Confidence 3468999999999998776665553333333333433
No 189
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=99.00 E-value=9.6e-10 Score=94.50 Aligned_cols=104 Identities=24% Similarity=0.228 Sum_probs=81.0
Q ss_pred ccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911 122 VFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQIL 200 (280)
Q Consensus 122 ~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l 200 (280)
-|..++.+.||+||||+.. ..++++. |++.++|++|+++|++++|+||+ .++.+...+
T Consensus 124 ~~~~~~~i~~D~D~TL~~~--------------------~~~v~irdp~V~EtL~eLkekGikLaIvTNg-~Re~v~~~L 182 (303)
T PHA03398 124 VWEIPHVIVFDLDSTLITD--------------------EEPVRIRDPFVYDSLDELKERGCVLVLWSYG-NREHVVHSL 182 (303)
T ss_pred EeeeccEEEEecCCCccCC--------------------CCccccCChhHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHH
Confidence 5567899999999999852 2235455 99999999999999999999999 899999999
Q ss_pred hhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEeCCc
Q psy8911 201 NLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFDDEE 244 (280)
Q Consensus 201 ~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~igD~~ 244 (280)
+++|+.+||+.+.+.+. || |......+++.|+..=.++ .|+|=.
T Consensus 183 e~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 183 KETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 99999999985432211 23 3447888889998865555 677766
Q ss_pred CC
Q psy8911 245 RN 246 (280)
Q Consensus 245 ~d 246 (280)
.+
T Consensus 263 ~N 264 (303)
T PHA03398 263 SN 264 (303)
T ss_pred cc
Confidence 54
No 190
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.99 E-value=3.9e-09 Score=90.85 Aligned_cols=124 Identities=10% Similarity=0.018 Sum_probs=86.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc----------ceecCCC-h---------h
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK----------QIFPGQK-T---------T 68 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~----------~i~~~~~-~---------~ 68 (280)
..+++.||+.++++.|+++|++++|+|++.. ..++.+++.+++.+.+..+ .+..+-+ + .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 4689999999999999999999999999999 9999999999987555411 1221211 1 1
Q ss_pred HHHHHHHHhC--CCCccEEEEeCCcccccccccC-C---CeEEEEcCCCchhhhhccccccccceeEEEecCCCC
Q psy8911 69 HFANLKKATG--IEYKDMVFFDDEERNSHDVSPL-G---VTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTL 137 (280)
Q Consensus 69 ~~~~~~~~~g--~~p~~~l~v~D~~~~i~aa~~~-G---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL 137 (280)
.++.+++.++ .+|++||+|||+..|+.+|.-. . .-.|++.+....+.+...+..| -+++--|.|+
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~----Divl~~D~t~ 267 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSY----DIVLVQDETL 267 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhC----CEEEECCCCc
Confidence 1667888888 8999999999999999998766 3 2334444444333333222222 2234446666
No 191
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.99 E-value=4.3e-10 Score=90.09 Aligned_cols=103 Identities=9% Similarity=0.063 Sum_probs=86.3
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCCh----hHHHHHHHHhCCCCccE
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKT----THFANLKKATGIEYKDM 84 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~ 84 (280)
.+...||+.++|++|.+. |.++|.|+++. ..++.+++.++... +|+ .+++.+.. +.|.+.++.+|.++++|
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ldp~~~~f~--~~l~r~~~~~~~~~~~K~L~~l~~~~~~v 115 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDILDRGGKVIS--RRLYRESCVFTNGKYVKDLSLVGKDLSKV 115 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHHHCcCCCEEe--EEEEccccEEeCCCEEeEchhcCCChhhE
Confidence 467899999999999987 99999999999 99999999999876 888 55544322 23778888899999999
Q ss_pred EEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911 85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAIT 116 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~ 116 (280)
|+|||++.++.++.++|+.+..+.+.....++
T Consensus 116 IiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L 147 (162)
T TIGR02251 116 IIIDNSPYSYSLQPDNAIPIKSWFGDPNDTEL 147 (162)
T ss_pred EEEeCChhhhccCccCEeecCCCCCCCCHHHH
Confidence 99999999999999999998877655444443
No 192
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.98 E-value=6.2e-10 Score=93.33 Aligned_cols=98 Identities=7% Similarity=0.031 Sum_probs=74.9
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc-ccceecCC-------ChhHH----------
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD-HKQIFPGQ-------KTTHF---------- 70 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd-~~~i~~~~-------~~~~~---------- 70 (280)
..++++||+.++|+.|+++|++++|+|++.. ..++.+++.++...+|- ...++.++ ....+
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 4578999999999999999999999999999 89999998875444441 11222221 11112
Q ss_pred HHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
..++++++..+++|+||||+.+|+.+|++||+ +++++
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~ 182 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARD 182 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehH
Confidence 46778888899999999999999999999998 44433
No 193
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.95 E-value=5.7e-09 Score=87.86 Aligned_cols=107 Identities=21% Similarity=0.286 Sum_probs=82.9
Q ss_pred ceeccCCCHHHHHHHH--hhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE-------------ecC---------
Q psy8911 162 TLIKYYRGVPEILRYL--KENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------YPG--------- 217 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L--~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~-------------~~~--------- 217 (280)
..+++.||+.++++.+ ++.|+.+.|+|.+ ...+++.+|++.|+.+.|+.+.+ .+-
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDa-Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDA-NSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCC-cHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4578899999999999 5689999999999 89999999999999998874311 010
Q ss_pred ---CCHHHHHHHHHH---cCCCCCcEEEEeCCcCCcccccccCc-eEEEECCCCCHHHH
Q psy8911 218 ---PKTTHFESLKKA---TGIEYKDMVFFDDEERNSHDVSPLGV-TCIHVKKGMSHAVL 269 (280)
Q Consensus 218 ---~k~~~~~~~~~~---~~~~~~~~l~igD~~~di~~a~~aG~-~~i~v~~g~~~~~~ 269 (280)
-|...+..+++. -|++.++++||||+.+|+-.+.+++- ..+..+.|++...+
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~ 205 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKL 205 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHH
Confidence 122445555555 47899999999999999999998764 45666678765554
No 194
>PTZ00445 p36-lilke protein; Provisional
Probab=98.95 E-value=1.2e-09 Score=89.17 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=73.2
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchH--------------HHHHHHhhcCcccccccc-----ceecC---------
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQ--------------GAQQLLDLFNWNQYFDHK-----QIFPG--------- 64 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--------------~~~~~l~~~~l~~~fd~~-----~i~~~--------- 64 (280)
+-|....+++.|++.|++++|+|=+.... .++..|+.-+..--...+ ..+..
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 56789999999999999999999776612 466677755433212200 11111
Q ss_pred --CChhH--H--HHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 65 --QKTTH--F--ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 65 --~~~~~--~--~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
+++.. | +.+++++|+.|++|+||||+..|+++|+++|+++++++++
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 11222 5 9999999999999999999999999999999999999765
No 195
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.95 E-value=1.5e-09 Score=87.80 Aligned_cols=92 Identities=12% Similarity=0.192 Sum_probs=74.4
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc------eecC-----------CChhHH
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ------IFPG-----------QKTTHF 70 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~------i~~~-----------~~~~~~ 70 (280)
.+.++++||+.++|+.|+++|++++|+|++.. ..++.+++.+++..+|.... .+.+ .|...+
T Consensus 69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 69 ARQVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVL 147 (177)
T ss_pred HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence 45577899999999999999999999999999 89999999999987775211 1111 112237
Q ss_pred HHHHHHhCCCCccEEEEeCCcccccccccC
Q psy8911 71 ANLKKATGIEYKDMVFFDDEERNSHDVSPL 100 (280)
Q Consensus 71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~ 100 (280)
+..++++|+++++|++|||+.+|+.+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 777888899999999999999999988754
No 196
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.91 E-value=1.3e-09 Score=75.73 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=47.7
Q ss_pred cCCCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCCH
Q psy8911 216 PGPKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMSH 266 (280)
Q Consensus 216 ~~~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~~ 266 (280)
.+|.+..|..++++++++|++|+||||+ ..||++|+++|+.+++|.+|...
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~ 54 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYS 54 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSC
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCC
Confidence 4688999999999999999999999999 99999999999999999988743
No 197
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.91 E-value=1.2e-09 Score=87.05 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=76.4
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCc-------------
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSE------------- 192 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~------------- 192 (280)
|...||+||||........ +........++ |++.+.|++|++.||+++|+||-..
T Consensus 1 Kia~fD~DgTLi~~~s~~~-----------f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK-----------FPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT-----------S-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc-----------CcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4578999999974322211 01122334444 6899999999999999999999511
Q ss_pred HHHHHHHHhhCCCcccccc-c--eEecCCCHHHHHHHHHHcCC----CCCcEEEEeCC-----------cCCcccccccC
Q psy8911 193 ILHAKQILNLINLNQYFSN-K--EIYPGPKTTHFESLKKATGI----EYKDMVFFDDE-----------ERNSHDVSPLG 254 (280)
Q Consensus 193 ~~~~~~~l~~~gl~~~f~~-~--~~~~~~k~~~~~~~~~~~~~----~~~~~l~igD~-----------~~di~~a~~aG 254 (280)
....+.+++.+++.-.+-. . ....+|++.++..+++.++. +.++++||||+ ..|..-|.++|
T Consensus 70 ~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~g 149 (159)
T PF08645_consen 70 HEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCG 149 (159)
T ss_dssp HHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcC
Confidence 1345667777777622110 0 01224788999999999874 99999999996 56788888888
Q ss_pred ceEE
Q psy8911 255 VTCI 258 (280)
Q Consensus 255 ~~~i 258 (280)
++..
T Consensus 150 i~f~ 153 (159)
T PF08645_consen 150 IKFY 153 (159)
T ss_dssp --EE
T ss_pred Cccc
Confidence 8753
No 198
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.90 E-value=2e-09 Score=86.65 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=78.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCcccccccccee---------c--
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQYFDHKQIF---------P-- 63 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~~fd~~~i~---------~-- 63 (280)
+.+.+.||+.+.+..|++.||++.|+||.+. ++.....|+..|. -|| .++ |
T Consensus 28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id--~i~~Cph~p~~~c~c 103 (181)
T COG0241 28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KID--GILYCPHHPEDNCDC 103 (181)
T ss_pred HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcc
Confidence 3478999999999999999999999999643 1334445555553 344 222 1
Q ss_pred -CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911 64 -GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 64 -~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
.++++.|..+++++++++++.++|||+..|+++|.++|+..+.+..+..
T Consensus 104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~ 153 (181)
T COG0241 104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIG 153 (181)
T ss_pred cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcc
Confidence 2345669999999999999999999999999999999999888866543
No 199
>PLN02645 phosphoglycolate phosphatase
Probab=98.88 E-value=7.3e-09 Score=91.76 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=79.0
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHHHHHhh
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHAKQILNL 202 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~~~l~~ 202 (280)
.+.+.||+|||||. + -.++||+.+.|+.|+++|++++++||+ . +......|++
T Consensus 28 ~~~~~~D~DGtl~~---------------------~--~~~~~ga~e~l~~lr~~g~~~~~~TN~-~~~~~~~~~~~l~~ 83 (311)
T PLN02645 28 VETFIFDCDGVIWK---------------------G--DKLIEGVPETLDMLRSMGKKLVFVTNN-STKSRAQYGKKFES 83 (311)
T ss_pred CCEEEEeCcCCeEe---------------------C--CccCcCHHHHHHHHHHCCCEEEEEeCC-CCCCHHHHHHHHHH
Confidence 47899999999985 1 147899999999999999999999998 5 3333446688
Q ss_pred CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
+|+.-.++.+... .......+++.+......+|++++..+.+.++++|+.++.
T Consensus 84 lGi~~~~~~I~ts----~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 84 LGLNVTEEEIFSS----SFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CCCCCChhhEeeh----HHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 9997666643221 1234555566666555678998888888888889987653
No 200
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.88 E-value=1.2e-08 Score=81.15 Aligned_cols=118 Identities=19% Similarity=0.110 Sum_probs=79.7
Q ss_pred eeEEEecCCCCCCccccccc-Cc---------ccccC--Ce-eEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH
Q psy8911 127 NHLSKKLDYTLWPLHVHDLV-AP---------FKKIG--QK-VMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 193 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~-~~---------~~~~~--~~-~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~ 193 (280)
..+++|+|.||+.+...... .. ..... .. ........++++||+.++|+.|++. +.++|+|++ .+
T Consensus 7 l~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~-~~ 84 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG-TR 84 (156)
T ss_pred eEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC-cH
Confidence 46799999999976543221 00 00000 00 1112345678999999999999966 999999999 99
Q ss_pred HHHHHHHhhCCCc-cccccceEecCCCHHHHHHHH-HHcCCCCCcEEEEeCCcCC
Q psy8911 194 LHAKQILNLINLN-QYFSNKEIYPGPKTTHFESLK-KATGIEYKDMVFFDDEERN 246 (280)
Q Consensus 194 ~~~~~~l~~~gl~-~~f~~~~~~~~~k~~~~~~~~-~~~~~~~~~~l~igD~~~d 246 (280)
.++..++++++.. .+|....++.+.-...+.+-+ .-++.+.+.+++|+|++.-
T Consensus 85 ~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~vvivDd~~~~ 139 (156)
T TIGR02250 85 AYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMVVIIDDREDV 139 (156)
T ss_pred HHHHHHHHHhCcCCCeeccEEEEeccCCCCccccHHHHcCCCcccEEEEeCCHHH
Confidence 9999999999998 588433232221112233334 3457899999999999864
No 201
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.87 E-value=5.5e-09 Score=99.65 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=72.5
Q ss_pred eeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911 163 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD 241 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig 241 (280)
+..++||+.++|++|+++| ++++|+||. ....++.+++++|+.++|... .+.+|+. ++++++..+++++|||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd-~~~~a~~i~~~lgi~~~f~~~--~p~~K~~----~v~~l~~~~~~v~~vG 454 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGD-NRSAAEAVAAELGIDEVHAEL--LPEDKLA----IVKELQEEGGVVAMVG 454 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCC-CHHHHHHHHHHhCCCeeeccC--CHHHHHH----HHHHHHHcCCEEEEEE
Confidence 3568999999999999999 999999999 899999999999999999753 2234443 4444445778999999
Q ss_pred CCcCCcccccccCc
Q psy8911 242 DEERNSHDVSPLGV 255 (280)
Q Consensus 242 D~~~di~~a~~aG~ 255 (280)
|+.+|+.++++||+
T Consensus 455 Dg~nD~~al~~A~v 468 (556)
T TIGR01525 455 DGINDAPALAAADV 468 (556)
T ss_pred CChhHHHHHhhCCE
Confidence 99999999999994
No 202
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.84 E-value=1.8e-08 Score=85.16 Aligned_cols=43 Identities=21% Similarity=0.283 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 219 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 219 k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
|...+..+++++|++++++++|||+.+|+...+.+|..+ .+.+
T Consensus 158 Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v-am~N 200 (230)
T PRK01158 158 KGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGV-AVAN 200 (230)
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceE-EecC
Confidence 345578889999999999999999999999999999875 4443
No 203
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.83 E-value=1.4e-08 Score=84.31 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=75.7
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee------cC------CChhHHHHHHHHh
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF------PG------QKTTHFANLKKAT 77 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~------~~------~~~~~~~~~~~~~ 77 (280)
.++++||+.++|+.|+++| +++|+|++.. ..++.+++.+|+..+|.....+ .+ .........+++.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~-~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCChH-HHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 4689999999999999985 9999999999 8999999999999888632111 11 1111134444555
Q ss_pred CCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
|. +|++|||+.+|+.+++.+|..+++...+.
T Consensus 144 ~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~ 174 (203)
T TIGR02137 144 YY---RVIAAGDSYNDTTMLSEAHAGILFHAPEN 174 (203)
T ss_pred CC---CEEEEeCCHHHHHHHHhCCCCEEecCCHH
Confidence 53 89999999999999999999998875543
No 204
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.82 E-value=5.3e-09 Score=99.76 Aligned_cols=86 Identities=12% Similarity=0.159 Sum_probs=73.0
Q ss_pred cceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 10 HIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
+-+++||+.++|++|+++| ++++|+||.+. ..++.+++.+|+.++|. .+...++. .+.++++..+++|+|||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K~----~~v~~l~~~~~~v~~vG 454 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHA--ELLPEDKL----AIVKELQEEGGVVAMVG 454 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeec--cCCHHHHH----HHHHHHHHcCCEEEEEE
Confidence 4578999999999999999 99999999999 89999999999999998 54332222 34455555788999999
Q ss_pred CCcccccccccCCC
Q psy8911 89 DEERNSHDVSPLGV 102 (280)
Q Consensus 89 D~~~~i~aa~~~G~ 102 (280)
|+.+|+.+++++|+
T Consensus 455 Dg~nD~~al~~A~v 468 (556)
T TIGR01525 455 DGINDAPALAAADV 468 (556)
T ss_pred CChhHHHHHhhCCE
Confidence 99999999999993
No 205
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.81 E-value=5.5e-09 Score=72.55 Aligned_cols=51 Identities=20% Similarity=0.289 Sum_probs=45.5
Q ss_pred CCChhHHHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCchh
Q psy8911 64 GQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTNA 114 (280)
Q Consensus 64 ~~~~~~~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~~ 114 (280)
.+....|..++++++++|++|+||||+ ..||.+|+++|+.+|+|.+|....
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~ 55 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSP 55 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCC
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCH
Confidence 455666999999999999999999999 899999999999999998876543
No 206
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.80 E-value=1.2e-08 Score=95.47 Aligned_cols=87 Identities=17% Similarity=0.290 Sum_probs=72.6
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCch-----------HHHHHHHhhcCccccccccceecC-------CChhHHHHHH
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEI-----------QGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLK 74 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-----------~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~ 74 (280)
+|||+.+.|+.|+++||+++|+||++.. ..++.+++.+|+. |+ .+++. ++++++..++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fd--viia~~~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQ--VFIAIGAGFYRKPLTGMWDHLK 273 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eE--EEEeCCCCCCCCCCHHHHHHHH
Confidence 6999999999999999999999998771 2467788888874 77 55543 3346699999
Q ss_pred HHhC----CCCccEEEEeCCcccccccccCCCe
Q psy8911 75 KATG----IEYKDMVFFDDEERNSHDVSPLGVT 103 (280)
Q Consensus 75 ~~~g----~~p~~~l~v~D~~~~i~aa~~~G~~ 103 (280)
+.++ +++++|+||||+..++++|+++|-+
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 9884 9999999999999999998888864
No 207
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.79 E-value=2.1e-07 Score=80.59 Aligned_cols=102 Identities=14% Similarity=0.213 Sum_probs=70.3
Q ss_pred cCCCHHHHHHHHhhCCcEEEEEcCCCc----HHHHHHHHhhCCCcc---ccccceEec--CCCHHHHHHHHHHcCCCCCc
Q psy8911 166 YYRGVPEILRYLKENKCLVAAASRTSE----ILHAKQILNLINLNQ---YFSNKEIYP--GPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~----~~~~~~~l~~~gl~~---~f~~~~~~~--~~k~~~~~~~~~~~~~~~~~ 236 (280)
.++++.++++.++..+..+.++|+... ....+.+.+++++.- ++..+.+.+ ..|...++.+++++|+++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e 217 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN 217 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 356677777777777777777777522 233445556666542 122223332 36778899999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ 270 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~ 270 (280)
+++|||+.+|++.++.+|+ .+.+.+ ..+.++
T Consensus 218 ~i~~GD~~NDi~m~~~ag~-~vamgn--a~~~lk 248 (272)
T PRK10530 218 VVAFGDNFNDISMLEAAGL-GVAMGN--ADDAVK 248 (272)
T ss_pred eEEeCCChhhHHHHHhcCc-eEEecC--chHHHH
Confidence 9999999999999999997 344443 345554
No 208
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.79 E-value=2.3e-08 Score=83.80 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=79.3
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+++.+|+||||++.. -.+.|...+.|++|+++|++++++|++ ....+...++.+++.
T Consensus 2 k~v~~DlDGTLl~~~----------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR-~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN----------------------RMISERAIEAIRKAEKKGIPVSLVTGN-TVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCC----------------------cccCHHHHHHHHHHHHCCCEEEEEcCC-cchhHHHHHHHhCCC
Confidence 578999999998521 124477888888888888888888888 666666677776664
Q ss_pred ccccc------------c--------------------------------------------------------------
Q psy8911 207 QYFSN------------K-------------------------------------------------------------- 212 (280)
Q Consensus 207 ~~f~~------------~-------------------------------------------------------------- 212 (280)
.++-. +
T Consensus 59 ~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (215)
T TIGR01487 59 GPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFA 138 (215)
T ss_pred CcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCce
Confidence 21110 0
Q ss_pred -eEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 213 -EIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 213 -~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
.+.+ -.|...++.+++++|++++++++|||+.+|++..+.+|+.++.
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred EEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 0000 0222447888899999999999999999999999999977443
No 209
>KOG1615|consensus
Probab=98.78 E-value=3.1e-08 Score=79.19 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=71.8
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--c------cccc-----------eEecCCCHHH
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--Y------FSNK-----------EIYPGPKTTH 222 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~------f~~~-----------~~~~~~k~~~ 222 (280)
...++-||++++.+.|+++|.+++++|++ .+..+..+...|||.. . |+.. .+-++.|.+.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGG-F~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~ 163 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGG-FRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEV 163 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCC-hHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHH
Confidence 35678899999999999999999999999 9999999999999975 2 2210 1112356677
Q ss_pred HHHHHHHcCCCCCcEEEEeCCcCCcccccc
Q psy8911 223 FESLKKATGIEYKDMVFFDDEERNSHDVSP 252 (280)
Q Consensus 223 ~~~~~~~~~~~~~~~l~igD~~~di~~a~~ 252 (280)
+..+.+ +.+.+.++||||..+|+++...
T Consensus 164 i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 164 IALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHh--CCChheeEEecCCccccccCCc
Confidence 777766 8999999999999999988776
No 210
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.78 E-value=1.2e-08 Score=80.58 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=79.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccc---eEecCCCHHHHHHHHHHcCCCCCc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~---~~~~~~k~~~~~~~~~~~~~~~~~ 236 (280)
..++||++.+.|++.++.|+++.|-|++ +...++....+- +|..+|+.. .++.+.....|.+++...|++|.+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSG-SV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSG-SVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCC-CchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh
Confidence 4689999999999999999999999999 666555555553 344555531 233333347799999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEEC
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
++|+-|.+..+.+|+.+||.++++.
T Consensus 180 ilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred eEEecCCHHHHHHHHhcchheeeee
Confidence 9999999999999999999999884
No 211
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.77 E-value=9.8e-09 Score=97.49 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=73.0
Q ss_pred eeccCCCHHHHHHHHhhCCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911 163 LIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD 241 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig 241 (280)
.-.++||+.++|+.|+++|+ +++++||. ....++..++++|++++|... .+.+|. .++++++-++++++|||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd-~~~~a~~i~~~lgi~~~f~~~--~p~~K~----~~i~~l~~~~~~v~~vG 432 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGD-RRAVAERVARELGIDEVHAEL--LPEDKL----EIVKELREKYGPVAMVG 432 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCC-CHHHHHHHHHHcCChhhhhcc--CcHHHH----HHHHHHHhcCCEEEEEe
Confidence 34689999999999999999 99999999 899999999999999998742 223343 35555566668999999
Q ss_pred CCcCCcccccccCc
Q psy8911 242 DEERNSHDVSPLGV 255 (280)
Q Consensus 242 D~~~di~~a~~aG~ 255 (280)
|+.+|+.++++||+
T Consensus 433 Dg~nD~~al~~A~v 446 (536)
T TIGR01512 433 DGINDAPALAAADV 446 (536)
T ss_pred CCHHHHHHHHhCCE
Confidence 99999999999996
No 212
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.75 E-value=4.3e-08 Score=87.24 Aligned_cols=87 Identities=13% Similarity=0.112 Sum_probs=57.4
Q ss_pred eecCCHHHHHHHHHHC----CceEEEecCCC---chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccE
Q psy8911 12 KYYPDVPGILKYLKQN----NCLVAAASRTS---EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDM 84 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~----g~~~~i~Sn~~---~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~ 84 (280)
.++||+.++++.|+++ |+++.++||+. ....++.+.+.+|+.---+ .++.+.. .....+++.+ ..+
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~--~i~~s~~--~~~~ll~~~~---~~v 88 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPL--QVIQSHS--PYKSLVNKYE---KRI 88 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHH--HHHhhhH--HHHHHHHHcC---Cce
Confidence 4599999999999999 99999999997 3133455557788653333 4554432 1233334442 257
Q ss_pred EEEeCCcccccccccCCCeEEE
Q psy8911 85 VFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
++||-+. -.+.+..+|+..+.
T Consensus 89 ~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 89 LAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred EEEeChH-HHHHHHHcCCcccc
Confidence 8888653 35666688877653
No 213
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=6.1e-08 Score=87.45 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=98.7
Q ss_pred ceeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
.++++.|||+|||.....+.. .. +.-....+..+|....+.+..|+++|+-++|+|-+ ...-++...+...
T Consensus 222 kK~LVLDLDNTLWGGVIGedGv~G-------I~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN-~~~da~evF~khp 293 (574)
T COG3882 222 KKALVLDLDNTLWGGVIGEDGVDG-------IRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKN-TEKDAKEVFRKHP 293 (574)
T ss_pred cceEEEecCCcccccccccccccc-------eeecCCCCchhHHHHHHHHHHHHhccEEEEEecCC-chhhHHHHHhhCC
Confidence 368999999999976554432 11 11112224567788899999999999999999999 6666666665542
Q ss_pred C----ccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911 205 L----NQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL 269 (280)
Q Consensus 205 l----~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~ 269 (280)
- .+.|....+.+.||.+.++++++++|+..+.++|++|++...+-.++-+- +..++.+-+...+
T Consensus 294 ~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~-v~Vi~~~~Dps~~ 361 (574)
T COG3882 294 DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP-VSVIEFPEDPSFL 361 (574)
T ss_pred CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc-eeeccCCCCHHHH
Confidence 1 24566667788899999999999999999999999999999988888654 3333334344433
No 214
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.74 E-value=4.5e-08 Score=82.38 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
+|...+..+++++|++++++++|||+.+|+...+.+|.. +.+.+
T Consensus 149 ~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~N 192 (225)
T TIGR01482 149 NKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVAN 192 (225)
T ss_pred CHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCC
Confidence 344568899999999999999999999999999999986 55544
No 215
>KOG3040|consensus
Probab=98.74 E-value=2.2e-07 Score=75.16 Aligned_cols=192 Identities=15% Similarity=0.223 Sum_probs=109.2
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
...||+.|.|+.|+.++.++=.+||... +.-+.+.++ +|+.- +...|+++-.. -...+++.++.| .++|+
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk-~Sk~~l~~rL~rlgf~v--~eeei~tsl~a--a~~~~~~~~lrP--~l~v~ 95 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTK-ESKRNLHERLQRLGFDV--SEEEIFTSLPA--ARQYLEENQLRP--YLIVD 95 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcc-hhHHHHHHHHHHhCCCc--cHHHhcCccHH--HHHHHHhcCCCc--eEEEc
Confidence 3789999999999999999999999988 665555444 45321 11144444332 456677778877 45566
Q ss_pred CC-cccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911 89 DE-ERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY 167 (280)
Q Consensus 89 D~-~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (280)
|. ..|...--...=++|.+... .+. | ..+-+
T Consensus 96 d~a~~dF~gidTs~pn~VVigla--pe~---------------F-------------------------------~y~~l 127 (262)
T KOG3040|consen 96 DDALEDFDGIDTSDPNCVVIGLA--PEG---------------F-------------------------------SYQRL 127 (262)
T ss_pred ccchhhCCCccCCCCCeEEEecC--ccc---------------c-------------------------------cHHHH
Confidence 65 33443332222222222100 000 0 00011
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC--CCcccccc--------ceEecCCCHHHHHHHHHHcCCCCCcE
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI--NLNQYFSN--------KEIYPGPKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~--gl~~~f~~--------~~~~~~~k~~~~~~~~~~~~~~~~~~ 237 (280)
..+-.+|...++. .-|+-++ .+-+.+ ...+ |.-.|... ..+..+|.+..|+.+++.+|++|+++
T Consensus 128 n~AFrvL~e~~k~---~LIai~k-gryykr--~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~a 201 (262)
T KOG3040|consen 128 NRAFRVLLEMKKP---LLIAIGK-GRYYKR--VDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEA 201 (262)
T ss_pred HHHHHHHHcCCCC---eEEEecC-ceeeee--ccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHh
Confidence 1222232222221 2222222 111111 1111 11111111 12345788899999999999999999
Q ss_pred EEEeCCcC-CcccccccCceEEEECCCC
Q psy8911 238 VFFDDEER-NSHDVSPLGVTCIHVKKGM 264 (280)
Q Consensus 238 l~igD~~~-di~~a~~aG~~~i~v~~g~ 264 (280)
+||||..+ |+-.|.+.||+.+.|+.|.
T Consensus 202 VMIGDD~~dDvgGAq~~GMrgilVkTGK 229 (262)
T KOG3040|consen 202 VMIGDDLNDDVGGAQACGMRGILVKTGK 229 (262)
T ss_pred eEEccccccchhhHhhhcceeEEeeccc
Confidence 99999988 7888999999999998775
No 216
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.72 E-value=1.9e-08 Score=95.55 Aligned_cols=86 Identities=14% Similarity=0.177 Sum_probs=74.1
Q ss_pred cceecCCHHHHHHHHHHCCc-eEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 10 HIKYYPDVPGILKYLKQNNC-LVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~-~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
+-+++||+.++|+.|+++|+ +++++||.+. ..++.+++.+|+.++|. .+...++ ..+.++++..+++++|||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K----~~~i~~l~~~~~~v~~vG 432 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHA--ELLPEDK----LEIVKELREKYGPVAMVG 432 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhh--ccCcHHH----HHHHHHHHhcCCEEEEEe
Confidence 45789999999999999999 9999999999 99999999999999998 4433222 345666667779999999
Q ss_pred CCcccccccccCCC
Q psy8911 89 DEERNSHDVSPLGV 102 (280)
Q Consensus 89 D~~~~i~aa~~~G~ 102 (280)
|+.+|+.+++++|+
T Consensus 433 Dg~nD~~al~~A~v 446 (536)
T TIGR01512 433 DGINDAPALAAADV 446 (536)
T ss_pred CCHHHHHHHHhCCE
Confidence 99999999999996
No 217
>PRK08238 hypothetical protein; Validated
Probab=98.69 E-value=4.4e-08 Score=91.23 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=76.7
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh------hHHHHHHHHhCCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT------THFANLKKATGIEYK 82 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~------~~~~~~~~~~g~~p~ 82 (280)
..++++||+.++|++++++|++++|+||++. ..++.+++.+|+ || .++++++. .+-..+.+.++ .+
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~-~~a~~i~~~lGl---Fd--~Vigsd~~~~~kg~~K~~~l~~~l~--~~ 140 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDE-RLAQAVAAHLGL---FD--GVFASDGTTNLKGAAKAAALVEAFG--ER 140 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCC---CC--EEEeCCCccccCCchHHHHHHHHhC--cc
Confidence 4456889999999999999999999999999 899999999987 88 67665432 12444555665 46
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
+++|+||+.+|+.+++.+| +.+.|....
T Consensus 141 ~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 141 GFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred CeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 6999999999999999999 888886543
No 218
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.66 E-value=9.5e-08 Score=91.23 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=69.3
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDE 243 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~ 243 (280)
-.++||+.++|++|+++|++++++|+. ....++..++++|++ +|.. ..+.+|.+.+ ++++-++++++||||+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd-~~~~a~~ia~~lgi~-~~~~--~~p~~K~~~v----~~l~~~~~~v~~VGDg 475 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGD-NRKTAKAVAKELGIN-VRAE--VLPDDKAALI----KELQEKGRVVAMVGDG 475 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCC-CHHHHHHHHHHcCCc-EEcc--CChHHHHHHH----HHHHHcCCEEEEEeCC
Confidence 468899999999999999999999999 899999999999996 5542 1223343333 4444477999999999
Q ss_pred cCCcccccccCce
Q psy8911 244 ERNSHDVSPLGVT 256 (280)
Q Consensus 244 ~~di~~a~~aG~~ 256 (280)
.+|+.++++||+.
T Consensus 476 ~nD~~al~~A~vg 488 (562)
T TIGR01511 476 INDAPALAQADVG 488 (562)
T ss_pred CccHHHHhhCCEE
Confidence 9999999999974
No 219
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.63 E-value=3.4e-08 Score=82.51 Aligned_cols=99 Identities=13% Similarity=0.182 Sum_probs=83.4
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----eecC----------CChhHHHHHHH
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----IFPG----------QKTTHFANLKK 75 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i~~~----------~~~~~~~~~~~ 75 (280)
++++||+.++++.|+++|++++|+|.++. ..++.+.+.+|+...+.... ++++ .|....+..++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 88999999999999999999999999999 99999999999987766221 1111 12333889999
Q ss_pred HhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 76 ATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 76 ~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
.+|+++++++++|||.+|+..-+.+|...+.-+.+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~ 189 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP 189 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH
Confidence 99999999999999999999999999887766544
No 220
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.59 E-value=3.4e-07 Score=78.53 Aligned_cols=46 Identities=13% Similarity=0.076 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
+|...++.+++++|++++++++|||+.+|+...+.++..+++|.+.
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 4556688999999999999999999999999999988888888764
No 221
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.54 E-value=1.7e-07 Score=89.58 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=69.7
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDD 89 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D 89 (280)
.-+++||+.++|++|+++|++++++|+.+. ..++.+.+.+|+. +|. .+...++ ..+.++++-++++|+||||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~--~~~p~~K----~~~v~~l~~~~~~v~~VGD 474 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRA--EVLPDDK----AALIKELQEKGRVVAMVGD 474 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEc--cCChHHH----HHHHHHHHHcCCEEEEEeC
Confidence 346899999999999999999999999999 9999999999995 555 3322222 2334444457899999999
Q ss_pred CcccccccccCCC
Q psy8911 90 EERNSHDVSPLGV 102 (280)
Q Consensus 90 ~~~~i~aa~~~G~ 102 (280)
+.+|+.+++++|+
T Consensus 475 g~nD~~al~~A~v 487 (562)
T TIGR01511 475 GINDAPALAQADV 487 (562)
T ss_pred CCccHHHHhhCCE
Confidence 9999999999996
No 222
>KOG3120|consensus
Probab=98.53 E-value=2.6e-07 Score=75.46 Aligned_cols=105 Identities=17% Similarity=0.290 Sum_probs=77.2
Q ss_pred eeccCCCHHHHHHHHhhCCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecC----------------------C-
Q psy8911 163 LIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG----------------------P- 218 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~----------------------~- 218 (280)
.++..||+.++++.+++.|. -+.|+|.+ ....++..|++.|+.++|..+.+-+. |
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDa-NsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs 160 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDA-NSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS 160 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecC-chhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence 46788999999999999995 99999999 88999999999999999985421110 1
Q ss_pred ---CH---HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccC-ceEEEECCCCCHHH
Q psy8911 219 ---KT---THFESLKKATGIEYKDMVFFDDEERNSHDVSPLG-VTCIHVKKGMSHAV 268 (280)
Q Consensus 219 ---k~---~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG-~~~i~v~~g~~~~~ 268 (280)
|. +.|..-.-+-|+..++++|+||+.+|+-....+. ..++..+.|++...
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWK 217 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHh
Confidence 11 1122222334889999999999999988887754 44444446776444
No 223
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.53 E-value=3.2e-07 Score=73.24 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=75.4
Q ss_pred cceecCCHHHHHHHHHHCCc--eEEEecCCC-------chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCC-
Q psy8911 10 HIKYYPDVPGILKYLKQNNC--LVAAASRTS-------EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGI- 79 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~--~~~i~Sn~~-------~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~- 79 (280)
+-++.|.+.+.+++|++.+- +++|+||+. . ..++.+-+.+|+. .|- ....|++.+..+++.++.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~-~~a~~~~~~lgIp-vl~----h~~kKP~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDG-ERAEALEKALGIP-VLR----HRAKKPGCFREILKYFKCQ 130 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccH-HHHHHHHHhhCCc-EEE----eCCCCCccHHHHHHHHhhc
Confidence 34667899999999999976 499999994 4 6778888888841 111 223455667777777754
Q ss_pred ----CCccEEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911 80 ----EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 80 ----~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~ 111 (280)
.|+++++|||+. .||-+|..+|+.+|+++.|.
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 599999999996 59999999999999998874
No 224
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.52 E-value=2.6e-07 Score=92.30 Aligned_cols=91 Identities=10% Similarity=0.066 Sum_probs=75.7
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
.++||+.+.|+.|+++|++++++|+. ....++.+++++|+.++|... . |+.-..++++++..+++++||||+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd-~~~~a~~ia~~lgi~~~~~~~--~----p~~K~~~i~~l~~~~~~v~~vGDg~ 722 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGD-NPTTANAIAKEAGIDEVIAGV--L----PDGKAEAIKRLQSQGRQVAMVGDGI 722 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCCEEEeCC--C----HHHHHHHHHHHhhcCCEEEEEeCCH
Confidence 57899999999999999999999999 889999999999999888642 1 2223446677777899999999999
Q ss_pred CCcccccccCceEEEECCC
Q psy8911 245 RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 245 ~di~~a~~aG~~~i~v~~g 263 (280)
+|+.++++||+ .+.+.+|
T Consensus 723 nD~~al~~Agv-gia~g~g 740 (834)
T PRK10671 723 NDAPALAQADV-GIAMGGG 740 (834)
T ss_pred HHHHHHHhCCe-eEEecCC
Confidence 99999999999 3444444
No 225
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.49 E-value=9.5e-07 Score=76.82 Aligned_cols=84 Identities=12% Similarity=0.032 Sum_probs=59.3
Q ss_pred HHHhhCCcEEEEE---cCCCcHHHHHHHHhhCCCc----cccccceEecCCCHHHHHHHHHHcCCCC-CcEEEEeCCcCC
Q psy8911 175 RYLKENKCLVAAA---SRTSEILHAKQILNLINLN----QYFSNKEIYPGPKTTHFESLKKATGIEY-KDMVFFDDEERN 246 (280)
Q Consensus 175 ~~L~~~g~~~~i~---T~~~~~~~~~~~l~~~gl~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~-~~~l~igD~~~d 246 (280)
+.++..++...++ |+. ....+...++..++. .+|..+.... .|...+..+++++|+++ +++++|||+.+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~ND 219 (273)
T PRK00192 142 RLAKDREFSEPFLWNGSEA-AKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPND 219 (273)
T ss_pred HHHHhcccCCceeecCchH-HHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhh
Confidence 3344555554444 544 555666667777765 4444333333 66677999999999999 999999999999
Q ss_pred cccccccCceEEEE
Q psy8911 247 SHDVSPLGVTCIHV 260 (280)
Q Consensus 247 i~~a~~aG~~~i~v 260 (280)
+..++.+|+.++.-
T Consensus 220 i~m~~~ag~~vam~ 233 (273)
T PRK00192 220 LPMLEAADIAVVVP 233 (273)
T ss_pred HHHHHhCCeeEEeC
Confidence 99999999765443
No 226
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.45 E-value=3.3e-07 Score=67.38 Aligned_cols=56 Identities=20% Similarity=0.091 Sum_probs=43.1
Q ss_pred EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH--HHHHHHHhhCCCc
Q psy8911 129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLINLN 206 (280)
Q Consensus 129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~--~~~~~~l~~~gl~ 206 (280)
+.||+|||||. .-.++||+.++|+.|+++|+++.++||+... ......|+.+|+.
T Consensus 1 ~l~D~dGvl~~-----------------------g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYN-----------------------GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEE-----------------------TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEe-----------------------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 47999999984 1358899999999999999999999999322 3445667889988
Q ss_pred c
Q psy8911 207 Q 207 (280)
Q Consensus 207 ~ 207 (280)
-
T Consensus 58 ~ 58 (101)
T PF13344_consen 58 V 58 (101)
T ss_dssp -
T ss_pred C
Confidence 3
No 227
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=98.42 E-value=2.9e-07 Score=73.42 Aligned_cols=127 Identities=19% Similarity=0.178 Sum_probs=75.3
Q ss_pred eeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
+++++|+||||+........ ..+. .........+.+.||+.++|+.|.+. +.++|.|++ .+.+++.+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~----~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~-~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFK----IIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSA-SEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEE----EETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS--HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccc----eeccccceeEeeCchHHHHHHHHHHh-ceEEEEEee-hhhhhhHHHHhhhh
Confidence 57899999999865433211 0000 00011223467889999999999766 999999999 99999999999987
Q ss_pred -ccccccceEecCC--CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 206 -NQYFSNKEIYPGP--KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 206 -~~~f~~~~~~~~~--k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
..+|+........ ....+.+=++.++-+++++|+|+|++.-...-..-++.+--
T Consensus 75 ~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~ 131 (159)
T PF03031_consen 75 NGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPP 131 (159)
T ss_dssp TTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE---
T ss_pred hccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEecc
Confidence 4677654322211 01111245566677899999999999864333334444333
No 228
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.34 E-value=6.4e-07 Score=89.48 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=75.4
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE 90 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~ 90 (280)
-+++||+.+.|+.|+++|++++++|+.+. ..++.+.+.+|+.++|. .+...+ -..++++++..+++++||||+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~--~~~p~~----K~~~i~~l~~~~~~v~~vGDg 721 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIA--GVLPDG----KAEAIKRLQSQGRQVAMVGDG 721 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEe--CCCHHH----HHHHHHHHhhcCCEEEEEeCC
Confidence 36799999999999999999999999999 89999999999988887 443222 234667778889999999999
Q ss_pred cccccccccCCCeEEEE
Q psy8911 91 ERNSHDVSPLGVTCILV 107 (280)
Q Consensus 91 ~~~i~aa~~~G~~~i~v 107 (280)
.+|+.+++++|+ .+.+
T Consensus 722 ~nD~~al~~Agv-gia~ 737 (834)
T PRK10671 722 INDAPALAQADV-GIAM 737 (834)
T ss_pred HHHHHHHHhCCe-eEEe
Confidence 999999999999 4433
No 229
>KOG4549|consensus
Probab=98.34 E-value=3e-06 Score=63.11 Aligned_cols=88 Identities=32% Similarity=0.417 Sum_probs=77.5
Q ss_pred cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc---------ccccccceecCCChhHHHHHHHH
Q psy8911 6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN---------QYFDHKQIFPGQKTTHFANLKKA 76 (280)
Q Consensus 6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~---------~~fd~~~i~~~~~~~~~~~~~~~ 76 (280)
+.+.++..|+++...|..|+++|+.++++|+++.|+.+...|+.+.+. ..|+.+.+..+.+.++|...-+.
T Consensus 38 ~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~ 117 (144)
T KOG4549|consen 38 SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNN 117 (144)
T ss_pred cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhc
Confidence 467788999999999999999999999999999999999999998654 34565566677889999999999
Q ss_pred hCCCCccEEEEeCCccc
Q psy8911 77 TGIEYKDMVFFDDEERN 93 (280)
Q Consensus 77 ~g~~p~~~l~v~D~~~~ 93 (280)
.++...+..+++|-.+|
T Consensus 118 s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 118 SNSIEKNKQVFDDESRN 134 (144)
T ss_pred cCcchhceeeecccccC
Confidence 99999999999998776
No 230
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.34 E-value=1.3e-06 Score=69.34 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=65.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCCh-hHHHHHH-HHhCCCCccEE
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQKT-THFANLK-KATGIEYKDMV 85 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~~-~~~~~~~-~~~g~~p~~~l 85 (280)
..+.++||+.++|+.|++. |.++|+||++. ..++.+++.++.. .+|.+ .+++.+.. +.+.+-+ ..++.+.+.++
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~-~yA~~vl~~ldp~~~~F~~-ri~~rd~~~~~~~KdL~~i~~~d~~~vv 131 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTR-AYAQAIAKLIDPDGKYFGD-RIISRDESGSPHTKSLLRLFPADESMVV 131 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcH-HHHHHHHHHhCcCCCeecc-EEEEeccCCCCccccHHHHcCCCcccEE
Confidence 3478899999999999965 99999999999 9999999999988 48931 55554332 2333334 44688999999
Q ss_pred EEeCCcccccc
Q psy8911 86 FFDDEERNSHD 96 (280)
Q Consensus 86 ~v~D~~~~i~a 96 (280)
+|||++.-...
T Consensus 132 ivDd~~~~~~~ 142 (156)
T TIGR02250 132 IIDDREDVWPW 142 (156)
T ss_pred EEeCCHHHhhc
Confidence 99999754333
No 231
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.33 E-value=3e-06 Score=71.81 Aligned_cols=55 Identities=20% Similarity=0.174 Sum_probs=45.8
Q ss_pred EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+.+|+||||++. ... +-+...+.|+.|+++|++++++|++ ....+...++.+++.
T Consensus 1 i~~DlDGTLl~~--------------------~~~--i~~~~~~al~~l~~~g~~~~i~TGR-~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------------DGK--ISPETIEALKELQEKGIKLVIATGR-SYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCST--------------------TSS--SCHHHHHHHHHHHHTTCEEEEECSS-THHHHHHHHHHTTHC
T ss_pred cEEEECCceecC--------------------CCe--eCHHHHHHHHhhcccceEEEEEccC-cccccccccccccch
Confidence 479999999852 112 4488999999999999999999999 888888888888775
No 232
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.32 E-value=2.5e-06 Score=70.69 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 258 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i 258 (280)
+|...++.++++++++++++++|||+.+|+..++.+|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 44566899999999999999999999999999999988654
No 233
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.31 E-value=1.7e-06 Score=86.95 Aligned_cols=91 Identities=12% Similarity=0.067 Sum_probs=74.8
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc---------------------eEecCCCHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------------------EIYPGPKTTHF 223 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~---------------------~~~~~~k~~~~ 223 (280)
+++||+++.|+.|+++|+++.++|+. .+..+..+.+++|+..+++.. .++....|+.-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 67899999999999999999999999 999999999999998765432 24444556555
Q ss_pred HHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911 224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~ 256 (280)
..+.+.++-..+.+.|+||+.+|..+.++|++-
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVG 639 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIG 639 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCee
Confidence 555555555568999999999999999999953
No 234
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.29 E-value=2.8e-07 Score=79.05 Aligned_cols=99 Identities=11% Similarity=0.097 Sum_probs=66.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHH--HH-hhcCcccccccc-----ceecCCChhHHHHHHHHhCCCCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ--LL-DLFNWNQYFDHK-----QIFPGQKTTHFANLKKATGIEYKD 83 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~--~l-~~~~l~~~fd~~-----~i~~~~~~~~~~~~~~~~g~~p~~ 83 (280)
..|+.+...+..|+ +|.+ .|+||... ..-.. .+ ..-.+...++.. .....+++..|+.++++++++|++
T Consensus 121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~-~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 121 IDYEKFATATLAIR-KGAH-FIGTNGDL-AIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCHHHHHHHHHHHH-CCCe-EEEECCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 45666777777774 5777 88888766 22211 11 111122223310 111233445599999999999999
Q ss_pred EEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911 84 MVFFDDEE-RNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
|+||||+. .|+.+|+++||++++|.+|...
T Consensus 198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~ 228 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTK 228 (249)
T ss_pred EEEECCCchhhHHHHHHcCCcEEEEcCCCCC
Confidence 99999997 7999999999999999887643
No 235
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.26 E-value=7.4e-06 Score=69.15 Aligned_cols=106 Identities=16% Similarity=0.283 Sum_probs=81.4
Q ss_pred CcceecCCHHHHHHHH--HHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---------------------
Q psy8911 9 AHIKYYPDVPGILKYL--KQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ--------------------- 65 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L--~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~--------------------- 65 (280)
..+++.||+.++++.| ++.|+.+.|+|++.. -+.+.+|++.|+.+.|+ .|++.+
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs-~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANS-FFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcH-hHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCccCCCCCc
Confidence 5688999999999999 568999999999999 99999999999999988 454321
Q ss_pred ------ChhHHHHHHHH---hCCCCccEEEEeCCcccccccccCCCe-EEEEcCCCchhhhh
Q psy8911 66 ------KTTHFANLKKA---TGIEYKDMVFFDDEERNSHDVSPLGVT-CILVEDGMTNAITL 117 (280)
Q Consensus 66 ------~~~~~~~~~~~---~g~~p~~~l~v~D~~~~i~aa~~~G~~-~i~v~~~~~~~~~~ 117 (280)
|.......++. -|++.++++||||+.+|+-.+.+++-. .++.+.+.......
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i 206 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLI 206 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHH
Confidence 00113333333 478999999999999999999998876 44445565544443
No 236
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.25 E-value=1.1e-06 Score=68.16 Aligned_cols=81 Identities=14% Similarity=0.209 Sum_probs=71.8
Q ss_pred HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911 20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 99 (280)
Q Consensus 20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~ 99 (280)
-|+.|.+.|++++|+|.... ...+...+.+|+..+|. .+ .++...|..+++++++.|++|.|+||..+|+..-.+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s-~ive~Ra~~LGI~~~~q--G~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDS-PIVEKRAKDLGIKHLYQ--GI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCC-HHHHHHHHHcCCceeee--ch--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 47889999999999999999 78999999999988887 33 456666999999999999999999999999999999
Q ss_pred CCCeEE
Q psy8911 100 LGVTCI 105 (280)
Q Consensus 100 ~G~~~i 105 (280)
.|....
T Consensus 118 vGls~a 123 (170)
T COG1778 118 VGLSVA 123 (170)
T ss_pred cCCccc
Confidence 998765
No 237
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.22 E-value=2.7e-06 Score=73.94 Aligned_cols=63 Identities=19% Similarity=0.151 Sum_probs=53.5
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
|.+++.+|+||||++. . -...+++.+.|+.|+++|++++++|++ ....+...++.++
T Consensus 3 ~~kli~~DlDGTLl~~--------------------~--~~~~~~~~~ai~~l~~~Gi~~~iaTgR-~~~~~~~~~~~l~ 59 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH--------------------H--TYSYEPAKPALKALKEKGIPVIPCTSK-TAAEVEVLRKELG 59 (273)
T ss_pred cceEEEEcCcccCcCC--------------------C--CcCcHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Confidence 5789999999999852 1 124578999999999999999999999 8888889999999
Q ss_pred Cccccc
Q psy8911 205 LNQYFS 210 (280)
Q Consensus 205 l~~~f~ 210 (280)
+..+|-
T Consensus 60 l~~~~i 65 (273)
T PRK00192 60 LEDPFI 65 (273)
T ss_pred CCCCEE
Confidence 987664
No 238
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.22 E-value=4.7e-06 Score=71.78 Aligned_cols=86 Identities=19% Similarity=0.206 Sum_probs=64.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceec----CCChhHHHHHHHHhCCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFP----GQKTTHFANLKKATGIEYK 82 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~----~~~~~~~~~~~~~~g~~p~ 82 (280)
....++||+.++|+.|+++|++++++||.+.. +.....|+.+|+..++.. .++. +.+...++.+.+.+++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-~lllr~~~~~K~~rr~~I~~~y~I--- 190 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-HLLLKKDKSSKESRRQKVQKDYEI--- 190 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-eEEeCCCCCCcHHHHHHHHhcCCE---
Confidence 35678999999999999999999999998851 234467888898765432 3332 2344458888887777
Q ss_pred cEEEEeCCccccccccc
Q psy8911 83 DMVFFDDEERNSHDVSP 99 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~ 99 (280)
+++|||+..|+.+...
T Consensus 191 -vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 191 -VLLFGDNLLDFDDFFY 206 (266)
T ss_pred -EEEECCCHHHhhhhhc
Confidence 9999999999865443
No 239
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.21 E-value=4e-06 Score=77.22 Aligned_cols=102 Identities=16% Similarity=0.278 Sum_probs=72.4
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---------CccccccccceecC-CChh---------
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---------NWNQYFDHKQIFPG-QKTT--------- 68 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---------~l~~~fd~~~i~~~-~~~~--------- 68 (280)
...+..-|.+..+|+.||++|.++.++||++. +.+...++.+ .|.+||| .|+.+ .|+.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFD--vVIv~A~KP~FF~~~~pfr 255 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFD--VVIVDARKPGFFTEGRPFR 255 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCEC--EEEES--CCHHHCT---EE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhhee--EEEEcCCCCcccCCCCceE
Confidence 34566678999999999999999999999999 8988887775 4889999 44432 1211
Q ss_pred ---------------------------HHHHHHHHhCCCCccEEEEeCCcc-ccccccc-CCCeEEEEcCCCc
Q psy8911 69 ---------------------------HFANLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCILVEDGMT 112 (280)
Q Consensus 69 ---------------------------~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~-~G~~~i~v~~~~~ 112 (280)
....+.+-+|...++++||||+.. ||..+++ .||+|++|-+...
T Consensus 256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe 328 (448)
T PF05761_consen 256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE 328 (448)
T ss_dssp EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence 177888889999999999999964 7766666 5999999966543
No 240
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.21 E-value=2.7e-06 Score=69.49 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=65.0
Q ss_pred cCCCHH----HHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc-cceEec-----------C--C--CHHHHHH
Q psy8911 166 YYRGVP----EILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIYP-----------G--P--KTTHFES 225 (280)
Q Consensus 166 ~~~g~~----~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~-~~~~~~-----------~--~--k~~~~~~ 225 (280)
++|++. ++|+.++++|+++.|+|++ ....++.+++.+|+...+- ...... + . |...+..
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~-~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~ 164 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGS-PDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE 164 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEE-EHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence 456666 9999999999999999999 9999999999999986432 111111 0 1 5566666
Q ss_pred H---HHHcCCCCCcEEEEeCCcCCccccc
Q psy8911 226 L---KKATGIEYKDMVFFDDEERNSHDVS 251 (280)
Q Consensus 226 ~---~~~~~~~~~~~l~igD~~~di~~a~ 251 (280)
+ ... +.++..+++|||+.+|+..++
T Consensus 165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 6 445 899999999999999987653
No 241
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.21 E-value=1.5e-05 Score=59.94 Aligned_cols=100 Identities=10% Similarity=0.104 Sum_probs=81.2
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDD 242 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD 242 (280)
..++|+.+.+.|++|++. +.++|+|+- ....+...++-.|+.-+- ++....++.=..+++.++-+.+.++||||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgD-r~gsl~~lae~~gi~~~r----v~a~a~~e~K~~ii~eLkk~~~k~vmVGn 101 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGD-RKGSLVQLAEFVGIPVER----VFAGADPEMKAKIIRELKKRYEKVVMVGN 101 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCC-cchHHHHHHHHcCCceee----eecccCHHHHHHHHHHhcCCCcEEEEecC
Confidence 357999999999999999 999999998 888888899999976432 22346666667788888888899999999
Q ss_pred CcCCcccccccCceEEEECCCCCHHH
Q psy8911 243 EERNSHDVSPLGVTCIHVKKGMSHAV 268 (280)
Q Consensus 243 ~~~di~~a~~aG~~~i~v~~g~~~~~ 268 (280)
..+|+.+-++|.+-.+.+..+..+..
T Consensus 102 GaND~laLr~ADlGI~tiq~e~v~~r 127 (152)
T COG4087 102 GANDILALREADLGICTIQQEGVPER 127 (152)
T ss_pred CcchHHHhhhcccceEEeccCCcchH
Confidence 99999999998777777765444433
No 242
>KOG2630|consensus
Probab=98.19 E-value=5.4e-06 Score=68.26 Aligned_cols=98 Identities=22% Similarity=0.285 Sum_probs=78.5
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcC--------ccccccccceecCCCh--hHHHHHHHH
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN--------WNQYFDHKQIFPGQKT--THFANLKKA 76 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~--------l~~~fd~~~i~~~~~~--~~~~~~~~~ 76 (280)
....-..|+++...++..+..|++++|.|+++. . +++++-... +.+||| . -.+.++ ..|..+.+.
T Consensus 118 g~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv-~-AqKllfg~s~~gdl~~y~~gyfD--t-~iG~K~e~~sy~~I~~~ 192 (254)
T KOG2630|consen 118 GELKAHVYADVLPAIERWSGEGVRVYIYSSGSV-A-AQKLLFGYSDAGDLRKYISGYFD--T-TIGLKVESQSYKKIGHL 192 (254)
T ss_pred ccccccccchhHHHHHHHhhcCceEEEEcCCcH-H-HHHHHHcccCcchHHHHhhhhhh--c-cccceehhHHHHHHHHH
Confidence 334447899999999999999999999999999 4 455444332 336677 3 233333 449999999
Q ss_pred hCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 77 TGIEYKDMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 77 ~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
+|.+|.|++|+-|.+....||+.+|+++.++..
T Consensus 193 Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 193 IGKSPREILFLTDVPREAAAARKAGLQAGLVSR 225 (254)
T ss_pred hCCChhheEEeccChHHHHHHHhcccceeeeec
Confidence 999999999999999999999999999988844
No 243
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.17 E-value=1.2e-05 Score=63.99 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=69.6
Q ss_pred EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHH---HHHHhh---
Q psy8911 129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA---KQILNL--- 202 (280)
Q Consensus 129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~---~~~l~~--- 202 (280)
+++|+||||.++...... ....+.. ...|++.+++++++++|+++.++|+. +...+ +..++.
T Consensus 2 VisDIDGTL~~sd~~~~~----------~~~~~~~-~~~~~~~~a~~~l~~~G~~ivy~TGR-p~~~~~~t~~~l~~~~~ 69 (157)
T smart00775 2 VISDIDGTITKSDVLGHV----------VPIIGKD-WTHPGVAKLYRDIQNNGYKILYLTAR-PIGQADRTRSYLSQIKQ 69 (157)
T ss_pred EEEecCCCCccccccccc----------ccccccC-cCCHHHHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHHHHHhhh
Confidence 689999999976543322 1111111 35699999999999999999999999 65554 355655
Q ss_pred --CCCcc--cccc--ce--------EecCC---CHHHHHHHHHHcCCCCCcEE-EEeCCcCCcccccccCceE
Q psy8911 203 --INLNQ--YFSN--KE--------IYPGP---KTTHFESLKKATGIEYKDMV-FFDDEERNSHDVSPLGVTC 257 (280)
Q Consensus 203 --~gl~~--~f~~--~~--------~~~~~---k~~~~~~~~~~~~~~~~~~l-~igD~~~di~~a~~aG~~~ 257 (280)
.++.. .+-. .. +...+ |.+.+..+.+.+.-.--..+ -+||+..|+++=+++|++.
T Consensus 70 ~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 70 DGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 23331 1110 00 11112 22334444443321122333 4789999999999999753
No 244
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.09 E-value=5.3e-06 Score=71.80 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=63.6
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCch----HHHHHHHhhcCccc---cccccceecC--CChhHHHHHHHHhCCCCcc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEI----QGAQQLLDLFNWNQ---YFDHKQIFPG--QKTTHFANLKKATGIEYKD 83 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~~~l~~~~l~~---~fd~~~i~~~--~~~~~~~~~~~~~g~~p~~ 83 (280)
.++++.++++.++..+..+.++++.+.. ...+.+.+.+++.- .++...+... +|...++.+++.+|+++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e 217 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN 217 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 3567788888888888888888876531 23444555555441 1121123322 3444599999999999999
Q ss_pred EEEEeCCcccccccccCCC
Q psy8911 84 MVFFDDEERNSHDVSPLGV 102 (280)
Q Consensus 84 ~l~v~D~~~~i~aa~~~G~ 102 (280)
|++|||+.+|+++++.+|+
T Consensus 218 ~i~~GD~~NDi~m~~~ag~ 236 (272)
T PRK10530 218 VVAFGDNFNDISMLEAAGL 236 (272)
T ss_pred eEEeCCChhhHHHHHhcCc
Confidence 9999999999999999997
No 245
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.07 E-value=7.4e-06 Score=70.74 Aligned_cols=56 Identities=20% Similarity=0.367 Sum_probs=50.8
Q ss_pred Ccceec-CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh
Q psy8911 9 AHIKYY-PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT 67 (280)
Q Consensus 9 ~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~ 67 (280)
+.+++. ||+.++|++|+++|++++|+||+++ +.++..++.+|+..||+ .|++++.+
T Consensus 142 ~~v~irdPgV~EaL~~LkekGikLaIaTS~~R-e~v~~~L~~lGLd~YFd--vIIs~Gdv 198 (301)
T TIGR01684 142 EPVRIRDPRIYDSLTELKKRGCILVLWSYGDR-DHVVESMRKVKLDRYFD--IIISGGHK 198 (301)
T ss_pred CccccCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHcCCCcccC--EEEECCcc
Confidence 346666 9999999999999999999999999 89999999999999999 88887766
No 246
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.06 E-value=9e-06 Score=70.32 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=51.0
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+++.+|+||||++... ..++.+.+.|++|+++|++++++|++ ....+....+.+++.
T Consensus 2 KLIftDLDGTLLd~~~----------------------~~~~~a~~aL~~Lk~~GI~vVlaTGR-t~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF----------------------NSYGAARQALAALERRSIPLVLYSLR-TRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHhCCC
Confidence 6788999999987311 24466899999999999999999999 888888899999998
Q ss_pred cccc
Q psy8911 207 QYFS 210 (280)
Q Consensus 207 ~~f~ 210 (280)
++|-
T Consensus 59 ~p~I 62 (302)
T PRK12702 59 HPFI 62 (302)
T ss_pred CeEE
Confidence 6554
No 247
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.06 E-value=1.5e-05 Score=78.57 Aligned_cols=84 Identities=8% Similarity=0.026 Sum_probs=67.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
+++||+++.|++|+++|++++++|+. ....++.+.+++|+..++.. .+..|+..++. ++ .++.++||||+.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd-~~~~a~~ia~~lgi~~~~~~---~p~~K~~~v~~----l~-~~~~v~mvGDgi 638 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGD-NPRAAAAIAGELGIDFRAGL---LPEDKVKAVTE----LN-QHAPLAMVGDGI 638 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCeecCC---CHHHHHHHHHH----Hh-cCCCEEEEECCH
Confidence 68899999999999999999999999 89999999999999755542 22334443333 33 346899999999
Q ss_pred CCcccccccCceE
Q psy8911 245 RNSHDVSPLGVTC 257 (280)
Q Consensus 245 ~di~~a~~aG~~~ 257 (280)
+|..+.++|++-.
T Consensus 639 NDapAl~~A~vgi 651 (741)
T PRK11033 639 NDAPAMKAASIGI 651 (741)
T ss_pred HhHHHHHhCCeeE
Confidence 9999999998543
No 248
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.05 E-value=1.5e-05 Score=80.15 Aligned_cols=90 Identities=11% Similarity=0.089 Sum_probs=72.0
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc---------------------ceecCCChhHH
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK---------------------QIFPGQKTTHF 70 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~---------------------~i~~~~~~~~~ 70 (280)
+++||+.+.|+.|+++|+++.++|+.+. ..++.+.+.+|+...++.. .+++...+..-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQ-ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 7899999999999999999999999999 9999999999998766521 23333333333
Q ss_pred HHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911 71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 102 (280)
Q Consensus 71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~ 102 (280)
..+.+.++-..+.+.|+||+.+|+.|.++|++
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCe
Confidence 44444455556899999999999999999995
No 249
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.05 E-value=9.4e-06 Score=70.43 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=51.5
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
|.+++.+|+||||++. .. .+-+...+.|++|+++|++++++|++ +...+...++.++
T Consensus 1 m~kli~~DlDGTLl~~--------------------~~--~i~~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~ 57 (272)
T PRK15126 1 MARLAAFDMDGTLLMP--------------------DH--HLGEKTLSTLARLRERDITLTFATGR-HVLEMQHILGALS 57 (272)
T ss_pred CccEEEEeCCCcCcCC--------------------CC--cCCHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcC
Confidence 4689999999999852 11 25577899999999999999999999 8888888999999
Q ss_pred Ccccc
Q psy8911 205 LNQYF 209 (280)
Q Consensus 205 l~~~f 209 (280)
+..++
T Consensus 58 ~~~~~ 62 (272)
T PRK15126 58 LDAYL 62 (272)
T ss_pred CCCcE
Confidence 87553
No 250
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.04 E-value=2.7e-05 Score=67.42 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=33.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcCCccccccc---CceEEEECCC
Q psy8911 222 HFESLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKKG 263 (280)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a---G~~~i~v~~g 263 (280)
.+..+++.++++.+++++|||+.+|+..-+.+ +..+|.|.++
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 36778888899999999999999997776665 4566777544
No 251
>PRK10444 UMP phosphatase; Provisional
Probab=98.04 E-value=4e-06 Score=71.84 Aligned_cols=49 Identities=14% Similarity=0.110 Sum_probs=43.4
Q ss_pred CChhHHHHHHHHhCCCCccEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911 65 QKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 65 ~~~~~~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
++...|..++++++++|++|+||||+. .|+.+|+++|+++++|.+|...
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~ 224 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVST 224 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCC
Confidence 344459999999999999999999997 7999999999999999887654
No 252
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.04 E-value=1.1e-05 Score=69.75 Aligned_cols=57 Identities=23% Similarity=0.299 Sum_probs=50.3
Q ss_pred CCcceec-CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh
Q psy8911 8 GAHIKYY-PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT 67 (280)
Q Consensus 8 ~~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~ 67 (280)
...+++. |++.++|++|+++|++++|+||++. +.++..++.+++.++|+ .+++++..
T Consensus 143 ~~~v~irdp~V~EtL~eLkekGikLaIvTNg~R-e~v~~~Le~lgL~~yFD--vII~~g~i 200 (303)
T PHA03398 143 EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNR-EHVVHSLKETKLEGYFD--IIICGGRK 200 (303)
T ss_pred CCccccCChhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHcCCCcccc--EEEECCCc
Confidence 3445666 9999999999999999999999999 89999999999999999 77777654
No 253
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.03 E-value=2e-05 Score=72.73 Aligned_cols=100 Identities=13% Similarity=0.172 Sum_probs=70.5
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---------CCccccccceEecC----------------
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPG---------------- 217 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~---------------- 217 (280)
-+..-|.+..+|+.|+++|.++.++||+ .-.+++..++.+ .+.+|||.+++...
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS-~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNS-PFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS--HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEET
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCC-CCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEEC
Confidence 3455688999999999999999999999 899999888875 35689996543211
Q ss_pred -------CC------H------HHHHHHHHHcCCCCCcEEEEeCCcC-Ccccccc-cCceEEEECCC
Q psy8911 218 -------PK------T------THFESLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKKG 263 (280)
Q Consensus 218 -------~k------~------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~-aG~~~i~v~~g 263 (280)
.+ + .....+.+.+|....+++||||... ||..+++ .|++|++|-..
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 01 0 2267888889999999999999998 8888887 59999999544
No 254
>PRK11590 hypothetical protein; Provisional
Probab=98.02 E-value=1.9e-05 Score=65.99 Aligned_cols=91 Identities=13% Similarity=0.116 Sum_probs=69.6
Q ss_pred ceecCCHHHHH-HHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC---------------CChhHHHHHH
Q psy8911 11 IKYYPDVPGIL-KYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG---------------QKTTHFANLK 74 (280)
Q Consensus 11 ~~~~~g~~~~l-~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~---------------~~~~~~~~~~ 74 (280)
+.+|||+.++| +.|+++|++++|+||++. ..++.+++.+++.. .+ .+++. ...++...+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~-~~~~~il~~l~~~~-~~--~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~ 169 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ-PLVEQVYFDTPWLP-RV--NLIASQMQRRYGGWVLTLRCLGHEKVAQLE 169 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHccccc-cC--ceEEEEEEEEEccEECCccCCChHHHHHHH
Confidence 57799999999 679999999999999999 89999999988633 22 11111 1122366666
Q ss_pred HHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
+.+|.+...+.+-|||.+|+..-..+|-..+
T Consensus 170 ~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 170 RKIGTPLRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred HHhCCCcceEEEecCCcccHHHHHhCCCCEE
Confidence 6778888899999999999888777776544
No 255
>PRK10976 putative hydrolase; Provisional
Probab=97.99 E-value=1.5e-05 Score=68.90 Aligned_cols=60 Identities=18% Similarity=0.171 Sum_probs=49.9
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
.+++.+|+||||++. .. .+-+...+.|++|+++|++++++|+. ....+...++.+++
T Consensus 2 ikli~~DlDGTLl~~--------------------~~--~is~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~~ 58 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------------DH--TLSPYAKETLKLLTARGIHFVFATGR-HHVDVGQIRDNLEI 58 (266)
T ss_pred ceEEEEeCCCCCcCC--------------------CC--cCCHHHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHHHhcCC
Confidence 578999999999862 11 24467899999999999999999999 78778888899998
Q ss_pred ccc
Q psy8911 206 NQY 208 (280)
Q Consensus 206 ~~~ 208 (280)
..+
T Consensus 59 ~~~ 61 (266)
T PRK10976 59 KSY 61 (266)
T ss_pred CCe
Confidence 754
No 256
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.97 E-value=5.9e-06 Score=70.31 Aligned_cols=47 Identities=13% Similarity=0.115 Sum_probs=41.5
Q ss_pred CCChhHHHHHHHHhCCCCccE-EEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911 64 GQKTTHFANLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 64 ~~~~~~~~~~~~~~g~~p~~~-l~v~D~~-~~i~aa~~~G~~~i~v~~~ 110 (280)
.++...|+.++++++++|+++ +||||+. .||.+|+++|+++++|.+|
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 345556999999999999998 9999998 7999999999999999654
No 257
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.96 E-value=1.8e-05 Score=66.77 Aligned_cols=58 Identities=21% Similarity=0.122 Sum_probs=47.7
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 207 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~ 207 (280)
++.||+||||++. . ...+.+.+.|++|+++|++++++|++ .+..+...++.+|+.+
T Consensus 1 li~~DlDGTLl~~--------------------~---~~~~~~~~ai~~l~~~G~~~vi~TgR-~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------------G---YEPGPAREALEELKDLGFPIVFVSSK-TRAEQEYYREELGVEP 56 (225)
T ss_pred CEEEeCCCCCcCC--------------------C---CCchHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCCCC
Confidence 3689999999851 1 13467999999999999999999999 7777888899999865
Q ss_pred cc
Q psy8911 208 YF 209 (280)
Q Consensus 208 ~f 209 (280)
+|
T Consensus 57 ~~ 58 (225)
T TIGR02461 57 PF 58 (225)
T ss_pred cE
Confidence 43
No 258
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.94 E-value=1.8e-05 Score=67.00 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=78.7
Q ss_pred cceeEEEecCCCCCCcccccc--c---CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH---H
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDL--V---APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL---H 195 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~--~---~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~---~ 195 (280)
.+..++||+|+|+++...... . ..+.... .... ..+ ..++.||+.++++.++++|++++++||. ... .
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv-~~~-~~~aip~a~~l~~~~~~~G~~V~~iT~R-~~~~r~~ 147 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV-ASG-KAPAIPGALELYNYARSRGVKVFFITGR-PESQREA 147 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH-HCT-GGEEETTHHHHHHHHHHTTEEEEEEEEE-ETTCHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH-hcc-cCcccHHHHHHHHHHHHCCCeEEEEecC-CchhHHH
Confidence 356899999999986422210 0 0110000 0111 112 2378899999999999999999999998 433 5
Q ss_pred HHHHHhhCCCccccccceEecCC---------CHHHHHHHHHH-cCCCCCcEEEEeCCcCCccccccc---CceEEEECC
Q psy8911 196 AKQILNLINLNQYFSNKEIYPGP---------KTTHFESLKKA-TGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKK 262 (280)
Q Consensus 196 ~~~~l~~~gl~~~f~~~~~~~~~---------k~~~~~~~~~~-~~~~~~~~l~igD~~~di~~a~~a---G~~~i~v~~ 262 (280)
...-|+..|+..+-..+.-..++ |.+....+.++ +.+ +.+|||...|+..++.. |.+.+..|+
T Consensus 148 T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 148 TEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp HHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred HHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 56678888866432222122222 23334444444 333 67899999999995543 456666664
No 259
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.94 E-value=1.7e-05 Score=68.27 Aligned_cols=63 Identities=17% Similarity=0.033 Sum_probs=46.9
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH--HHHHHHhh-
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL--HAKQILNL- 202 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~--~~~~~l~~- 202 (280)
.+.+.||+||||+. ...++||+.+.|+.|+++|+++.++||++.+. .....|+.
T Consensus 8 y~~~l~DlDGvl~~-----------------------G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~ 64 (269)
T COG0647 8 YDGFLFDLDGVLYR-----------------------GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSL 64 (269)
T ss_pred cCEEEEcCcCceEe-----------------------CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhh
Confidence 46789999999974 24689999999999999999999999993322 23345555
Q ss_pred CCCcccccc
Q psy8911 203 INLNQYFSN 211 (280)
Q Consensus 203 ~gl~~~f~~ 211 (280)
.+++.-.+.
T Consensus 65 ~~~~~~~~~ 73 (269)
T COG0647 65 GGVDVTPDD 73 (269)
T ss_pred cCCCCCHHH
Confidence 555444443
No 260
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.93 E-value=1.3e-05 Score=65.45 Aligned_cols=84 Identities=14% Similarity=0.256 Sum_probs=61.6
Q ss_pred ecCCHH----HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc-cccee-----------cCC----ChhHHHH
Q psy8911 13 YYPDVP----GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD-HKQIF-----------PGQ----KTTHFAN 72 (280)
Q Consensus 13 ~~~g~~----~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd-~~~i~-----------~~~----~~~~~~~ 72 (280)
++|++. ++|+.++++|++++|+|.++. ..++.+++.+++...+- ...+. .+. |....+.
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~ 164 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE 164 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence 455555 999999999999999999999 99999999999875321 00111 111 3333555
Q ss_pred H---HHHhCCCCccEEEEeCCcccccccc
Q psy8911 73 L---KKATGIEYKDMVFFDDEERNSHDVS 98 (280)
Q Consensus 73 ~---~~~~g~~p~~~l~v~D~~~~i~aa~ 98 (280)
+ ... +..+..+++|||+.+|+.+++
T Consensus 165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 5 344 899999999999999987653
No 261
>PRK11590 hypothetical protein; Provisional
Probab=97.92 E-value=9.3e-05 Score=61.81 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=68.6
Q ss_pred eccCCCHHHHH-HHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC---cccccc-ce-Eec----CCC---HHHHHHHHHHc
Q psy8911 164 IKYYRGVPEIL-RYLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSN-KE-IYP----GPK---TTHFESLKKAT 230 (280)
Q Consensus 164 ~~~~~g~~~~L-~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl---~~~f~~-~~-~~~----~~k---~~~~~~~~~~~ 230 (280)
+.+|||+.++| +.|+++|++++|+||+ ....++.+++.+|+ .+.+-. .. .+. ++. .+-...+-+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas-~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGS-PQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCC-cHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence 46799999999 6789999999999999 88899999999996 332211 00 111 111 23344444455
Q ss_pred CCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 231 GIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
+.+...+.+.|||.+|+.-...+|-+.+.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 77788889999999998888888876444
No 262
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.90 E-value=2.5e-05 Score=65.53 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=57.6
Q ss_pred hCCcEEEE-EcCCCcHHHHHHHHhhCCCc----cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccccc
Q psy8911 179 ENKCLVAA-ASRTSEILHAKQILNLINLN----QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL 253 (280)
Q Consensus 179 ~~g~~~~i-~T~~~~~~~~~~~l~~~gl~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a 253 (280)
..++.+.+ .++. ....+...+++.++. .+|..+......|...+..+++++|++++++++|||+.+|+...+.+
T Consensus 136 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a 214 (221)
T TIGR02463 136 EASVPLLWRDSDS-RMPRFTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA 214 (221)
T ss_pred cCCccEEecCchh-HHHHHHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence 34455555 4555 555666677777765 44443222223677889999999999999999999999999999999
Q ss_pred CceEE
Q psy8911 254 GVTCI 258 (280)
Q Consensus 254 G~~~i 258 (280)
|..++
T Consensus 215 g~~va 219 (221)
T TIGR02463 215 DYAVV 219 (221)
T ss_pred CceEE
Confidence 97754
No 263
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.89 E-value=3.5e-05 Score=66.72 Aligned_cols=59 Identities=12% Similarity=0.094 Sum_probs=49.3
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
.+++.+|+||||++. .. .+-+...+.|++|+++|++++++|++ +...+...++.+++
T Consensus 3 ~kli~~DlDGTLl~~--------------------~~--~i~~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------------DH--TISPAVKQAIAAARAKGVNVVLTTGR-PYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCC--------------------CC--ccCHHHHHHHHHHHHCCCEEEEecCC-ChHHHHHHHHHhCC
Confidence 578999999999852 11 24477899999999999999999999 78888889999998
Q ss_pred cc
Q psy8911 206 NQ 207 (280)
Q Consensus 206 ~~ 207 (280)
..
T Consensus 60 ~~ 61 (270)
T PRK10513 60 EQ 61 (270)
T ss_pred CC
Confidence 63
No 264
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.87 E-value=3.3e-05 Score=66.66 Aligned_cols=60 Identities=23% Similarity=0.192 Sum_probs=51.3
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
+.+++.+|+||||++. ... .-+.+.+.|++++++|++++++|++ +...+...++.++
T Consensus 2 ~~kli~~DlDGTLl~~--------------------~~~--i~~~~~~al~~~~~~g~~v~iaTGR-~~~~~~~~~~~l~ 58 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------------NKT--ISPETKEALARLREKGVKVVLATGR-PLPDVLSILEELG 58 (264)
T ss_pred CeeEEEEcCCCCccCC--------------------CCc--cCHHHHHHHHHHHHCCCEEEEECCC-ChHHHHHHHHHcC
Confidence 4578999999999852 222 5588999999999999999999999 8888999999999
Q ss_pred Ccc
Q psy8911 205 LNQ 207 (280)
Q Consensus 205 l~~ 207 (280)
+..
T Consensus 59 ~~~ 61 (264)
T COG0561 59 LDG 61 (264)
T ss_pred CCc
Confidence 874
No 265
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.84 E-value=3e-05 Score=76.51 Aligned_cols=84 Identities=8% Similarity=0.062 Sum_probs=66.7
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE 90 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~ 90 (280)
-+++||+.+.|+.|+++|++++++|+.+. ..++.+.+.+|+..++. ....+|.. +.++++ .+..++||||+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~----~v~~l~-~~~~v~mvGDg 637 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVK----AVTELN-QHAPLAMVGDG 637 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHH----HHHHHh-cCCCEEEEECC
Confidence 37899999999999999999999999999 99999999999965444 22222222 333343 34689999999
Q ss_pred cccccccccCCCe
Q psy8911 91 ERNSHDVSPLGVT 103 (280)
Q Consensus 91 ~~~i~aa~~~G~~ 103 (280)
.+|..+.+++++-
T Consensus 638 iNDapAl~~A~vg 650 (741)
T PRK11033 638 INDAPAMKAASIG 650 (741)
T ss_pred HHhHHHHHhCCee
Confidence 9999999999943
No 266
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.84 E-value=6.5e-05 Score=64.13 Aligned_cols=109 Identities=23% Similarity=0.212 Sum_probs=82.6
Q ss_pred ccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH
Q psy8911 118 YGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK 197 (280)
Q Consensus 118 ~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~ 197 (280)
.....|..|..+.||+|.||+..... .-..-|.+.+-|..|+++|..+++=|-+ .++++.
T Consensus 114 ~~~~~~~~phVIVfDlD~TLItd~~~-------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG-~~eHV~ 173 (297)
T PF05152_consen 114 EESLVWEPPHVIVFDLDSTLITDEGD-------------------VRIRDPAVYDSLRELKEQGCVLVLWSYG-NREHVR 173 (297)
T ss_pred hhhccCCCCcEEEEECCCcccccCCc-------------------cccCChHHHHHHHHHHHcCCEEEEecCC-CHHHHH
Confidence 34456778899999999999852111 1124688999999999999999999999 999999
Q ss_pred HHHhhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEe
Q psy8911 198 QILNLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFD 241 (280)
Q Consensus 198 ~~l~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~ig 241 (280)
..++.++|.+||+.+.+.+. || |......+++.|+..=.++ .|+
T Consensus 174 ~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVD 253 (297)
T PF05152_consen 174 HSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVD 253 (297)
T ss_pred HHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEec
Confidence 99999999999996533210 23 3447888888898866655 677
Q ss_pred CCcCC
Q psy8911 242 DEERN 246 (280)
Q Consensus 242 D~~~d 246 (280)
|=..+
T Consensus 254 DL~~N 258 (297)
T PF05152_consen 254 DLKSN 258 (297)
T ss_pred cCccc
Confidence 76654
No 267
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.83 E-value=3.1e-05 Score=61.76 Aligned_cols=96 Identities=15% Similarity=0.222 Sum_probs=60.8
Q ss_pred CCcceec-CCHHHHHHHHHHCCceEEEecCCCch-------------HHHHHHHhhcCcccc--ccc-cceecCCChhHH
Q psy8911 8 GAHIKYY-PDVPGILKYLKQNNCLVAAASRTSEI-------------QGAQQLLDLFNWNQY--FDH-KQIFPGQKTTHF 70 (280)
Q Consensus 8 ~~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~-------------~~~~~~l~~~~l~~~--fd~-~~i~~~~~~~~~ 70 (280)
.....++ |++.+.|++|.++||.++|+||...- ...+.+++.+++--. +.. ...+..+..+++
T Consensus 24 ~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~ 103 (159)
T PF08645_consen 24 PDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMW 103 (159)
T ss_dssp TCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHH
T ss_pred HHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHH
Confidence 3446665 58999999999999999999998431 223345555554311 000 001122446679
Q ss_pred HHHHHHhC----CCCccEEEEeCC-----------cccccccccCCCe
Q psy8911 71 ANLKKATG----IEYKDMVFFDDE-----------ERNSHDVSPLGVT 103 (280)
Q Consensus 71 ~~~~~~~g----~~p~~~l~v~D~-----------~~~i~aa~~~G~~ 103 (280)
..+++.++ ++.++++||||+ ..|.+-|.++|++
T Consensus 104 ~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~ 151 (159)
T PF08645_consen 104 EFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIK 151 (159)
T ss_dssp HHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--
T ss_pred HHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCc
Confidence 99998876 599999999996 4678888888886
No 268
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.83 E-value=6.8e-05 Score=62.61 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=68.4
Q ss_pred ceecCCHHHHHH-HHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc----ceecCC--------ChhHHHHHHHHh
Q psy8911 11 IKYYPDVPGILK-YLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK----QIFPGQ--------KTTHFANLKKAT 77 (280)
Q Consensus 11 ~~~~~g~~~~l~-~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~----~i~~~~--------~~~~~~~~~~~~ 77 (280)
+.+|||+.++|+ +|+++|++++|+||++. ..++.+.+..++.+-.+.+ .+..+. ..++...+.+.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~-~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~ 171 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQ-PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI 171 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcH-HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence 468999999996 89999999999999999 8899998886653322200 110110 112355566666
Q ss_pred CCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911 78 GIEYKDMVFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
+.+.+.+.+-|||.+|+..-..+|-..+.
T Consensus 172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 172 GSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 77778889999999998887777765543
No 269
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.80 E-value=8.3e-05 Score=62.48 Aligned_cols=132 Identities=10% Similarity=-0.107 Sum_probs=79.2
Q ss_pred eeEEEecCCCCCCcccccc----c-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HH
Q psy8911 127 NHLSKKLDYTLWPLHVHDL----V-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AK 197 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~----~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~ 197 (280)
..++||+|.|+++...... . .++.... ..-. .....++.|++.++++.|+++|++++++|+. .... +.
T Consensus 78 ~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv--~~~~apaip~al~l~~~l~~~G~~Vf~lTGR-~e~~r~~T~ 154 (229)
T TIGR01675 78 DAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWL--GKGAAPALPEGLKLYQKIIELGIKIFLLSGR-WEELRNATL 154 (229)
T ss_pred cEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHH--HcCCCCCCHHHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHH
Confidence 5789999999987543211 0 1111100 0000 1234578999999999999999999999999 6544 66
Q ss_pred HHHhhCCCccccccceEec--C-CC-HHHHHHHHH-HcCCCCCc-EEEEeCCcCCcccccccCceEEEECCC
Q psy8911 198 QILNLINLNQYFSNKEIYP--G-PK-TTHFESLKK-ATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 198 ~~l~~~gl~~~f~~~~~~~--~-~k-~~~~~~~~~-~~~~~~~~-~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
..|+..|+..+ +.....+ . .+ ...|..-.+ ++--.-=+ +..|||...|+.. -.+|.+++-.|+.
T Consensus 155 ~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G-~~~~~RtFKLPNP 224 (229)
T TIGR01675 155 DNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLG-SPPGRRTFKLPNP 224 (229)
T ss_pred HHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcC-CCccCceeeCCCC
Confidence 77888888765 4333322 1 21 111221111 11111123 3578999999854 4677788777754
No 270
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.79 E-value=3.8e-05 Score=61.21 Aligned_cols=92 Identities=10% Similarity=0.094 Sum_probs=67.8
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-----------------ChhH-H
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-----------------KTTH-F 70 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-----------------~~~~-~ 70 (280)
..+++-||.++++++++++++++.|+|++-. .....+++...=.+-.+.+.+++.. ..++ =
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~-~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMD-PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCc-hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 4578899999999999999999999999999 7888888887633333322222211 1111 2
Q ss_pred HHHHHHhCCCCccEEEEeCCcccccccccCC
Q psy8911 71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLG 101 (280)
Q Consensus 71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G 101 (280)
-.+.+.+.-+++.++|.||+.+|+.||+..-
T Consensus 149 ~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 149 SSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred chhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 2455666778888999999999999998754
No 271
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.78 E-value=0.00011 Score=74.37 Aligned_cols=97 Identities=11% Similarity=0.098 Sum_probs=73.9
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--------cccc-----------------ceEecCCC
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSN-----------------KEIYPGPK 219 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--------~f~~-----------------~~~~~~~k 219 (280)
++.|++.+.|+.|++.|+++.++|+. ....+..+.+++|+.. .++. ..++....
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGD-NKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCC-CHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 57899999999999999999999999 8899999999999964 2221 11333333
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
|+.=.++.+.++-..+.+.|+||+.+|+.+.++|++- +.+.+|
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g 658 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG 658 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence 4333555556666678889999999999999999984 444444
No 272
>KOG3040|consensus
Probab=97.76 E-value=2.8e-05 Score=63.24 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=40.6
Q ss_pred hhHHHHHHHHhCCCCccEEEEeCCcc-cccccccCCCeEEEEcCCC
Q psy8911 67 TTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 67 ~~~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~ 111 (280)
.-.|..+++.+|++|++|+||||..+ |+-+|.++||+.|.|..|.
T Consensus 184 ~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK 229 (262)
T KOG3040|consen 184 PFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGK 229 (262)
T ss_pred HHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccc
Confidence 33499999999999999999999876 6999999999999998875
No 273
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.76 E-value=5.8e-05 Score=65.53 Aligned_cols=59 Identities=19% Similarity=0.100 Sum_probs=48.7
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
-++++.+|+||||++. .. ...+...+.|++|+++|++++++|++ +...+...++.+|
T Consensus 6 ~~~lI~~DlDGTLL~~--------------------~~--~i~~~~~~ai~~l~~~Gi~~viaTGR-~~~~i~~~~~~l~ 62 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------------HT--YDWQPAAPWLTRLREAQVPVILCSSK-TAAEMLPLQQTLG 62 (271)
T ss_pred CCeEEEEeCccCCcCC--------------------CC--cCcHHHHHHHHHHHHcCCeEEEEcCC-CHHHHHHHHHHhC
Confidence 3578899999999852 11 23466889999999999999999999 8888888999998
Q ss_pred Cc
Q psy8911 205 LN 206 (280)
Q Consensus 205 l~ 206 (280)
+.
T Consensus 63 ~~ 64 (271)
T PRK03669 63 LQ 64 (271)
T ss_pred CC
Confidence 85
No 274
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.74 E-value=7.2e-05 Score=64.28 Aligned_cols=58 Identities=24% Similarity=0.161 Sum_probs=47.6
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 207 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~ 207 (280)
++.+|+||||++. .. .+-+...+.|++|+++|++++++|+. ....+...++.+++..
T Consensus 1 li~~DlDGTLl~~--------------------~~--~i~~~~~~~i~~l~~~G~~~~iaTGR-~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------------DH--TISPSTKEALAKLREKGIKVVLATGR-PYKEVKNILKELGLDT 57 (256)
T ss_pred CEEEeCCCCCCCC--------------------CC--ccCHHHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCCC
Confidence 3689999999862 11 24478899999999999999999999 7888888899988874
Q ss_pred c
Q psy8911 208 Y 208 (280)
Q Consensus 208 ~ 208 (280)
+
T Consensus 58 ~ 58 (256)
T TIGR00099 58 P 58 (256)
T ss_pred C
Confidence 3
No 275
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=97.71 E-value=0.00023 Score=58.46 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=69.7
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++++.|+|+||+++.... .......-|++.++|+.+.+. |-++|-|.+ ...+++.+++.+++.
T Consensus 22 klLVLDLDeTLvh~~~~~---------------~~~~~~kRP~l~eFL~~~~~~-feIvVwTAa-~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 22 KLLVLDIDYTLFDHRSPA---------------ETGEELMRPYLHEFLTSAYED-YDIVIWSAT-SMKWIEIKMTELGVL 84 (195)
T ss_pred cEEEEeCCCceEcccccC---------------CCceEEeCCCHHHHHHHHHhC-CEEEEEecC-CHHHHHHHHHHhccc
Confidence 689999999999742111 012245679999999999985 999999999 899999999998764
Q ss_pred cc--c------ccc---e--Ee-cCCC-HHHHHHHHHHcC--CCCCcEEEEeCCcCCc
Q psy8911 207 QY--F------SNK---E--IY-PGPK-TTHFESLKKATG--IEYKDMVFFDDEERNS 247 (280)
Q Consensus 207 ~~--f------~~~---~--~~-~~~k-~~~~~~~~~~~~--~~~~~~l~igD~~~di 247 (280)
.. + +.- . .. .++. ...+..+-.+++ .+.+++|+|+|++...
T Consensus 85 ~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~ 142 (195)
T TIGR02245 85 TNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNF 142 (195)
T ss_pred CCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHH
Confidence 21 1 100 0 00 0110 111233333443 4889999999999973
No 276
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.69 E-value=0.0013 Score=56.35 Aligned_cols=42 Identities=24% Similarity=0.355 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
.|...++.++++++++++++++|||+.+|+...+.+|+.++.
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 677889999999999999999999999999999999987444
No 277
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.67 E-value=0.0004 Score=57.96 Aligned_cols=95 Identities=14% Similarity=0.090 Sum_probs=66.6
Q ss_pred eccCCCHHHHHH-HHhhCCcEEEEEcCCCcHHHHHHHHhhCCC---cccccc-ceEecC-----CC---HHHHHHHHHHc
Q psy8911 164 IKYYRGVPEILR-YLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSN-KEIYPG-----PK---TTHFESLKKAT 230 (280)
Q Consensus 164 ~~~~~g~~~~L~-~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl---~~~f~~-~~~~~~-----~k---~~~~~~~~~~~ 230 (280)
..++||+.++|+ +++++|++++|+||+ ....++.+.+..++ .+..-. .++..+ +. .+-...+-+.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas-~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~ 171 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGS-PQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI 171 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCC-cHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence 468999999995 889999999999999 88889988888655 332211 111111 11 12234444444
Q ss_pred CCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 231 GIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
+.+.+.+.+.|||.+|+.--..+|-+.+.
T Consensus 172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 172 GSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 66777888999999998888888876544
No 278
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.65 E-value=0.00025 Score=54.01 Aligned_cols=84 Identities=13% Similarity=0.030 Sum_probs=53.3
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++++||+||||...... .+ ....+.+++.+.|+.|+++|+.+.++|+. ...... ...|.
T Consensus 2 K~i~~DiDGTL~~~~~~---------------~y-~~~~~~~~~ie~L~~l~~~G~~IiiaTGR-~~~~~~---~n~~~- 60 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG---------------DY-ANVAPILAVIEKLRHYKALGFEIVISSSR-NMRTYE---GNVGK- 60 (126)
T ss_pred CEEEEeCCCCcccCCCC---------------cc-cccccCHHHHHHHHHHHHCCCEEEEECCC-Cchhhh---ccccc-
Confidence 57899999999742100 00 11347789999999999999999999999 433222 11121
Q ss_pred cccccceEecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911 207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVF 239 (280)
Q Consensus 207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ 239 (280)
| ...-.+.....+++.+++..++.|
T Consensus 61 --i------~~~~~~~t~~wL~k~~ipYd~l~~ 85 (126)
T TIGR01689 61 --I------NIHTLPIIILWLNQHNVPYDEIYV 85 (126)
T ss_pred --c------chhhHHHHHHHHHHcCCCCceEEe
Confidence 1 111224456677777887766655
No 279
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.65 E-value=0.00011 Score=63.31 Aligned_cols=57 Identities=19% Similarity=0.174 Sum_probs=46.0
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 207 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~ 207 (280)
++.+|+||||++.. . ...+...+.|+.|+++|++++++|++ ....+...++.+|+.+
T Consensus 1 li~~DlDGTll~~~--------------------~--~~~~~~~~~i~~l~~~g~~~~~~TgR-~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------------G--YDWGPAKEVLERLQELGIPVIPCTSK-TAAEVEYLRKELGLED 57 (256)
T ss_pred CEEEcCCCCCcCCC--------------------C--cCchHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCCC
Confidence 36799999998521 1 12345899999999999999999999 8888888999998754
No 280
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.00018 Score=57.46 Aligned_cols=92 Identities=13% Similarity=0.105 Sum_probs=65.6
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC--------------CCHHHH----
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG--------------PKTTHF---- 223 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------~k~~~~---- 223 (280)
..+++-||.+++.+..+++++++.|+|++ ....+..+++.++=.+..+.+.+++. ++..+|
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsG-m~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSG-MDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCC-CchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 44678899999999999999999999999 77788889988874333322211110 111111
Q ss_pred HHHHHHcCCCCCcEEEEeCCcCCcccccccC
Q psy8911 224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLG 254 (280)
Q Consensus 224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG 254 (280)
-.....+.-+++.++|.||+..|+.+|+...
T Consensus 149 ~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 149 SSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred chhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 2334555567788999999999999998743
No 281
>KOG1615|consensus
Probab=97.60 E-value=0.0004 Score=56.01 Aligned_cols=87 Identities=20% Similarity=0.289 Sum_probs=66.9
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--c------cccccee-----------cCCChhHH
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--Y------FDHKQIF-----------PGQKTTHF 70 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~------fd~~~i~-----------~~~~~~~~ 70 (280)
..++-||++|+...|+++|.+++++|.+-. ..+..+-..+|+.. . ||.-.-+ ++.+....
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~-~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFR-QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 567889999999999999999999999999 89999999999864 2 3211111 11222225
Q ss_pred HHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911 71 ANLKKATGIEYKDMVFFDDEERNSHDVSP 99 (280)
Q Consensus 71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~ 99 (280)
+.+.+ +.+.+.++||||...|++|..-
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCc
Confidence 55545 8999999999999999888766
No 282
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.56 E-value=0.00019 Score=58.93 Aligned_cols=91 Identities=21% Similarity=0.297 Sum_probs=56.9
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCch------HHHHHHHhhc-CccccccccceecCCChhHHHHHHHHhCC
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEI------QGAQQLLDLF-NWNQYFDHKQIFPGQKTTHFANLKKATGI 79 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~------~~~~~~l~~~-~l~~~fd~~~i~~~~~~~~~~~~~~~~g~ 79 (280)
+-..++|+||+.|+|+.|.+.|+.+.++|+.+.+ ......++++ +...+-+ .++++.|. .++.
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~--~~~~~~K~--------~v~~ 137 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDN--LIFTGDKT--------LVGG 137 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCC--EEEESSGG--------GC--
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchhe--EEEecCCC--------eEec
Confidence 3456899999999999999999777777776652 1223445544 3222222 45555542 1222
Q ss_pred CCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
+ ++|||++.++..+...|+++|++..+.
T Consensus 138 --D--vlIDD~~~n~~~~~~~g~~~iLfd~p~ 165 (191)
T PF06941_consen 138 --D--VLIDDRPHNLEQFANAGIPVILFDQPY 165 (191)
T ss_dssp --S--EEEESSSHHHSS-SSESSEEEEE--GG
T ss_pred --c--EEecCChHHHHhccCCCceEEEEcCCC
Confidence 2 899999999999999999999995543
No 283
>KOG2630|consensus
Probab=97.55 E-value=0.00029 Score=58.26 Aligned_cols=96 Identities=16% Similarity=0.232 Sum_probs=76.4
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC---Cc----cccccceEecCCCHHHHHHHHHHcCCCCCc
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN---LN----QYFSNKEIYPGPKTTHFESLKKATGIEYKD 236 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g---l~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~ 236 (280)
...|+++...++..+..|++++|-|++ ....+..+..+-+ +. .|||. .++-+..-..|..+.+..|.+|.|
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSg-sv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSG-SVAAQKLLFGYSDAGDLRKYISGYFDT-TIGLKVESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCC-cHHHHHHHHcccCcchHHHHhhhhhhc-cccceehhHHHHHHHHHhCCChhh
Confidence 478999999999999999999999999 6665554444432 22 35553 232233347799999999999999
Q ss_pred EEEEeCCcCCcccccccCceEEEEC
Q psy8911 237 MVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 237 ~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
++|.=|.+....+|+.+|+.+..+.
T Consensus 200 iLfLTd~~~Ea~aa~~aGl~a~l~~ 224 (254)
T KOG2630|consen 200 ILFLTDVPREAAAARKAGLQAGLVS 224 (254)
T ss_pred eEEeccChHHHHHHHhcccceeeee
Confidence 9999999999999999999998884
No 284
>KOG3120|consensus
Probab=97.53 E-value=0.00025 Score=58.34 Aligned_cols=102 Identities=16% Similarity=0.290 Sum_probs=77.1
Q ss_pred CcceecCCHHHHHHHHHHCCc-eEEEecCCCchHHHHHHHhhcCccccccccceecCCC--------------hh-----
Q psy8911 9 AHIKYYPDVPGILKYLKQNNC-LVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK--------------TT----- 68 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~-~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~--------------~~----- 68 (280)
..++.-||+.++++.+++.|. .+.|+|.+.. -+.+.+|+.+++.++|+ .|++.+- ..
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNs-fFIe~~Lea~~~~d~F~--~IfTNPa~~da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANS-FFIEEILEAAGIHDLFS--EIFTNPACVDASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCch-hHHHHHHHHccHHHHHH--HHhcCCcccCCCCcEEeecCCCCCccCc
Confidence 347889999999999999995 9999999999 99999999999999998 5553210 00
Q ss_pred ------------HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE-cCCCch
Q psy8911 69 ------------HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV-EDGMTN 113 (280)
Q Consensus 69 ------------~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v-~~~~~~ 113 (280)
.|..-.-+-|+..++.+||||+-+|+.........-+.. +.|.+.
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 033333345889999999999999988877755544444 334443
No 285
>PLN02382 probable sucrose-phosphatase
Probab=97.53 E-value=0.00053 Score=63.10 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHc---CCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~---~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.|...+..+++++ |+++++++.|||+.+|++.-+.+|...+.|.+.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 5567789999999 999999999999999999999999777777654
No 286
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.52 E-value=0.00029 Score=68.29 Aligned_cols=91 Identities=13% Similarity=0.144 Sum_probs=70.7
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
.+.|++++.+++|++.|+++.++|+. ....+..+.+.+|++++|.. ..+..|...++.+.++ .+.+.|+||..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD-~~~ta~~iA~~lGI~~v~a~--~~PedK~~~v~~lq~~----g~~VamvGDG~ 518 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGD-NRLTAAAIAAEAGVDDFIAE--ATPEDKIALIRQEQAE----GKLVAMTGDGT 518 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCEEEcC--CCHHHHHHHHHHHHHc----CCeEEEECCCc
Confidence 46699999999999999999999999 89999999999999887653 2222344444444332 34699999999
Q ss_pred CCcccccccCceEEEECCC
Q psy8911 245 RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 245 ~di~~a~~aG~~~i~v~~g 263 (280)
+|..+-++|++... +..|
T Consensus 519 NDapAL~~AdvGiA-m~~g 536 (675)
T TIGR01497 519 NDAPALAQADVGVA-MNSG 536 (675)
T ss_pred chHHHHHhCCEeEE-eCCC
Confidence 99999999987644 3344
No 287
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.45 E-value=4e-05 Score=60.75 Aligned_cols=93 Identities=6% Similarity=0.046 Sum_probs=61.3
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH----HHHhhCCCccccccceEecCCCHHHH--HHHHHHcCCCCCcE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAK----QILNLINLNQYFSNKEIYPGPKTTHF--ESLKKATGIEYKDM 237 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~----~~l~~~gl~~~f~~~~~~~~~k~~~~--~~~~~~~~~~~~~~ 237 (280)
..+..-++.++..=.++|-.+..+|+. .+..++ .+.+.+.|...--....+++||+..| -..++..++ -
T Consensus 113 SIPKevA~qLI~MHq~RGD~i~FvTGR-t~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~----~ 187 (237)
T COG3700 113 SIPKEVARQLIDMHQRRGDAIYFVTGR-TPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNI----R 187 (237)
T ss_pred cchHHHHHHHHHHHHhcCCeEEEEecC-CCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcCc----e
Confidence 345566788888889999999999998 655433 23334455332222222334555444 233444443 5
Q ss_pred EEEeCCcCCcccccccCceEEEEC
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
++.|||.+||.+|+.+|++.|.+-
T Consensus 188 IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 188 IHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred EEecCCchhhhHHHhcCccceeEE
Confidence 889999999999999999888773
No 288
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.00027 Score=68.87 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=66.0
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
.+.|++++.++.||++|+++.++|+- .+..++.+.+++||++++-. ..|..|.+..+++.+ .-..+.||||..
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGD-n~~~A~~iA~~lGId~v~Ae--llPedK~~~V~~l~~----~g~~VamVGDGI 609 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGD-NRRTAEAIAKELGIDEVRAE--LLPEDKAEIVRELQA----EGRKVAMVGDGI 609 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcChHhhecc--CCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence 46799999999999999999999999 89999999999999888864 334555555555542 226899999999
Q ss_pred CCccccccc
Q psy8911 245 RNSHDVSPL 253 (280)
Q Consensus 245 ~di~~a~~a 253 (280)
||--+-..|
T Consensus 610 NDAPALA~A 618 (713)
T COG2217 610 NDAPALAAA 618 (713)
T ss_pred hhHHHHhhc
Confidence 996555554
No 289
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.37 E-value=0.0012 Score=56.62 Aligned_cols=131 Identities=7% Similarity=-0.039 Sum_probs=76.9
Q ss_pred eeEEEecCCCCCCcccccc--c---CcccccCCeeEc---cCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--HHHH
Q psy8911 127 NHLSKKLDYTLWPLHVHDL--V---APFKKIGQKVMD---AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--ILHA 196 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~--~---~~~~~~~~~~~~---~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--~~~~ 196 (280)
..++||+|+|+++...... . .++.. ...+ -.....++.|++.++.+.|+++|+++.++||.+. +..+
T Consensus 102 dA~V~DIDET~LsN~pY~~~~~~g~e~~~~---~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 102 DTFLFNIDGTALSNIPYYKKHGYGSEKFDS---ELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CEEEEECccccccCHHHHHHhcCCCCcCCh---hhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 5889999999986432211 1 11110 1111 1123567899999999999999999999999932 2235
Q ss_pred HHHHhhCCCccccccceEecC---CC--HHHHHHH----HHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 197 KQILNLINLNQYFSNKEIYPG---PK--TTHFESL----KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 197 ~~~l~~~gl~~~f~~~~~~~~---~k--~~~~~~~----~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
..-|+..|+..+ +.....+. .+ ...|..- +.+-|- .=...|||...|+......+.++.-+|+.
T Consensus 179 ~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 179 EANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred HHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 566777788654 33222211 11 1112211 112121 22458899999986555334677777654
No 290
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.36 E-value=0.0069 Score=52.19 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=38.7
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY 55 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~ 55 (280)
.-+.+.+.|++++++|++++++|..+. ..+..+++.+++..+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~~~~~ 62 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELGLDGP 62 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCcc
Confidence 677899999999999999999999999 899999999998863
No 291
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.35 E-value=0.00041 Score=66.65 Aligned_cols=63 Identities=21% Similarity=0.181 Sum_probs=50.8
Q ss_pred ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
.+.+++.+|+||||++.. . ...+...+.|+.|+++|++++++|++ ....+...++.+
T Consensus 414 ~~~KLIfsDLDGTLLd~d--------------------~--~i~~~t~eAL~~L~ekGI~~VIATGR-s~~~i~~l~~~L 470 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL--------------------T--YSYSTALDALRLLKDKELPLVFCSAK-TMGEQDLYRNEL 470 (694)
T ss_pred ceeeEEEEECcCCCcCCC--------------------C--ccCHHHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHc
Confidence 356789999999998621 1 13356789999999999999999999 888888899999
Q ss_pred CCcccc
Q psy8911 204 NLNQYF 209 (280)
Q Consensus 204 gl~~~f 209 (280)
++.++|
T Consensus 471 gl~~~~ 476 (694)
T PRK14502 471 GIKDPF 476 (694)
T ss_pred CCCCeE
Confidence 986544
No 292
>PTZ00174 phosphomannomutase; Provisional
Probab=97.35 E-value=0.0004 Score=59.44 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=42.3
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.+++.+|+||||++. ... +-|...+.|++|+++|++++++|+. +...+...++.
T Consensus 5 ~klia~DlDGTLL~~--------------------~~~--is~~~~~ai~~l~~~Gi~~viaTGR-~~~~i~~~l~~ 58 (247)
T PTZ00174 5 KTILLFDVDGTLTKP--------------------RNP--ITQEMKDTLAKLKSKGFKIGVVGGS-DYPKIKEQLGE 58 (247)
T ss_pred CeEEEEECcCCCcCC--------------------CCC--CCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHhh
Confidence 478999999999852 112 3366899999999999999999999 77666655553
No 293
>PLN02887 hydrolase family protein
Probab=97.34 E-value=0.00038 Score=66.46 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=47.9
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
+.+++.+|+||||++. .. .+-+...+.|++|+++|++++++|+. ....+...++.++
T Consensus 307 ~iKLIa~DLDGTLLn~--------------------d~--~Is~~t~eAI~kl~ekGi~~vIATGR-~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNS--------------------KS--QISETNAKALKEALSRGVKVVIATGK-ARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCC--------------------CC--ccCHHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhC
Confidence 4579999999999862 11 24477889999999999999999999 7877777888777
Q ss_pred Cc
Q psy8911 205 LN 206 (280)
Q Consensus 205 l~ 206 (280)
+.
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 53
No 294
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.34 E-value=0.0007 Score=68.56 Aligned_cols=97 Identities=11% Similarity=0.136 Sum_probs=71.7
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--------cccc-----------------cceecCCC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--------YFDH-----------------KQIFPGQK 66 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--------~fd~-----------------~~i~~~~~ 66 (280)
+|+|++.+.|+.|+++|+++.++|..+. ..+..+.+.+|+.. .++. ..+++...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 5799999999999999999999999998 89999999999853 2221 01222222
Q ss_pred hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
+..=..+.+.++-..+.+.|+||+.+|+.+.++|++- |.+..+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g 658 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG 658 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence 2222444556666678899999999999999999993 444333
No 295
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.33 E-value=0.00053 Score=57.50 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=53.0
Q ss_pred CceEEE-ecCCCchHHHHHHHhhcCcc----ccccccceecCC--ChhHHHHHHHHhCCCCccEEEEeCCcccccccccC
Q psy8911 28 NCLVAA-ASRTSEIQGAQQLLDLFNWN----QYFDHKQIFPGQ--KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 100 (280)
Q Consensus 28 g~~~~i-~Sn~~~~~~~~~~l~~~~l~----~~fd~~~i~~~~--~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~ 100 (280)
++.+.+ .++... +..+..++..++. .+|. .+.... |....+.+++.+|+++++|++|||+.+|+...+.+
T Consensus 138 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~--ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a 214 (221)
T TIGR02463 138 SVPLLWRDSDSRM-PRFTALLADLGLAIVQGNRFS--HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA 214 (221)
T ss_pred CccEEecCchhHH-HHHHHHHHHcCCeEEecCCee--EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence 344444 444444 4555666666665 4454 455432 33349999999999999999999999999999999
Q ss_pred CCeEE
Q psy8911 101 GVTCI 105 (280)
Q Consensus 101 G~~~i 105 (280)
|...+
T Consensus 215 g~~va 219 (221)
T TIGR02463 215 DYAVV 219 (221)
T ss_pred CceEE
Confidence 97654
No 296
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.32 E-value=0.0043 Score=53.58 Aligned_cols=45 Identities=22% Similarity=0.313 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.|...+..+++++|+++++++.|||+.+|+..-+.+|.. +++.++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~NA 240 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG-VAMGNA 240 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce-EEecCc
Confidence 677889999999999999999999999999999999985 445443
No 297
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.32 E-value=0.0011 Score=64.52 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=65.3
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
.+.||+++.+++|++.|+++.++|+- .+..+..+.+.+|++++|-. ..+..|....+.. ++ .-+-+.|+||..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGId~v~A~--~~PedK~~iV~~l-Q~---~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGD-NPLTAAAIAAEAGVDDFLAE--ATPEDKLALIRQE-QA---EGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCcEEEcc--CCHHHHHHHHHHH-HH---cCCeEEEECCCc
Confidence 46799999999999999999999999 99999999999999886653 1222333333332 33 335588999999
Q ss_pred CCcccccccCce
Q psy8911 245 RNSHDVSPLGVT 256 (280)
Q Consensus 245 ~di~~a~~aG~~ 256 (280)
||-.+-++|.+-
T Consensus 518 NDAPALa~ADVG 529 (679)
T PRK01122 518 NDAPALAQADVG 529 (679)
T ss_pred chHHHHHhCCEe
Confidence 998888887654
No 298
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.32 E-value=0.00091 Score=65.00 Aligned_cols=91 Identities=13% Similarity=0.147 Sum_probs=68.3
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
++.|++++.+++|++.|+++.++|+- .+..+..+.+++|++++|.. -.|+.=..+.+.++-.-+-+.|+||..
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGI~~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv 513 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGD-NELTAATIAKEAGVDRFVAE------CKPEDKINVIREEQAKGHIVAMTGDGT 513 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCceEEcC------CCHHHHHHHHHHHHhCCCEEEEECCCh
Confidence 56799999999999999999999999 99999999999999987653 233332222233333335688999999
Q ss_pred CCcccccccCceEEEECCC
Q psy8911 245 RNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 245 ~di~~a~~aG~~~i~v~~g 263 (280)
||--+-++|.+- +.+..|
T Consensus 514 NDAPALa~ADVG-IAMgsG 531 (673)
T PRK14010 514 NDAPALAEANVG-LAMNSG 531 (673)
T ss_pred hhHHHHHhCCEE-EEeCCC
Confidence 998888887664 333344
No 299
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.30 E-value=0.003 Score=47.75 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=76.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++|+.+.+.|++|++. +.++|+|.... -......+..|+. ...++.+.+...=..+.+.++-+.+-|+||||..
T Consensus 30 klf~ev~e~iqeL~d~-V~i~IASgDr~-gsl~~lae~~gi~----~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGa 103 (152)
T COG4087 30 KLFSEVSETIQELHDM-VDIYIASGDRK-GSLVQLAEFVGIP----VERVFAGADPEMKAKIIRELKKRYEKVVMVGNGA 103 (152)
T ss_pred EEcHhhHHHHHHHHHh-heEEEecCCcc-hHHHHHHHHcCCc----eeeeecccCHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 6899999999999999 99999999888 7788888887742 1144556666556677788887889999999999
Q ss_pred ccccccccCCCeEEEEcCCCch
Q psy8911 92 RNSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 92 ~~i~aa~~~G~~~i~v~~~~~~ 113 (280)
+|+-+-+++-.-.+-+.+...+
T Consensus 104 ND~laLr~ADlGI~tiq~e~v~ 125 (152)
T COG4087 104 NDILALREADLGICTIQQEGVP 125 (152)
T ss_pred chHHHhhhcccceEEeccCCcc
Confidence 9999999987776666544333
No 300
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.28 E-value=0.0011 Score=55.30 Aligned_cols=120 Identities=18% Similarity=0.150 Sum_probs=78.0
Q ss_pred cceeEEEecCCCCCCccccccc-----CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLV-----APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH--- 195 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~--- 195 (280)
....++.|+|-|++|.....-. .+|.... +.-+ .....++.||+.++|++.-++|.++.-+||. ..+.
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV--~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR-~~~~~~~ 154 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWV--QAKKSKAVPGAVEFLNYVNSNGGKIFYISNR-DQENEKD 154 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHH--hhcccccCccHHHHHHHHHhcCcEEEEEecc-chhcccc
Confidence 3458899999999886443221 2222111 1111 1235688999999999999999999999999 6554
Q ss_pred -HHHHHhhCCCccccccceEec---CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccc
Q psy8911 196 -AKQILNLINLNQYFSNKEIYP---GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS 251 (280)
Q Consensus 196 -~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~ 251 (280)
...-|+.+||...-+...... ++|...+..+-+ ..+=+++|||+..|..+..
T Consensus 155 ~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 155 GTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred hhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence 456788888876555332222 244444554444 5556789999999865543
No 301
>KOG2470|consensus
Probab=97.18 E-value=0.00047 Score=60.40 Aligned_cols=97 Identities=15% Similarity=0.273 Sum_probs=72.2
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---Ccccccccccee-cCCChh-----------------H
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIF-PGQKTT-----------------H 69 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~-~~~~~~-----------------~ 69 (280)
+.-.|....+|+.|+++|.++.++||+|. .++..-++.+ .|.+.|| .|+ ...++. .
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPy-sFVd~GM~flvG~~WRdlFD--VVIvqA~KP~Fftde~rPfR~~dek~~s 315 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPY-SFVDKGMRFLVGDDWRDLFD--VVIVQANKPEFFTDERRPFRKYDEKRGS 315 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCch-hhhhcCceeeeCccHHhhhh--eeEEecCCCcccccccCcchhhcccccc
Confidence 44567788999999999999999999999 8887766654 5788999 433 221111 0
Q ss_pred -------------------HHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCC
Q psy8911 70 -------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDG 110 (280)
Q Consensus 70 -------------------~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~ 110 (280)
....++-.|-.-.++++|||.. +|+..-. +.||++-.+-+.
T Consensus 316 l~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~E 377 (510)
T KOG2470|consen 316 LLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPE 377 (510)
T ss_pred hhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHH
Confidence 4555666778889999999995 5877666 899998776443
No 302
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.17 E-value=0.00026 Score=56.22 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=59.8
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc-cccccccceecCCCh----hHHHHHHHHhCCCCccE
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW-NQYFDHKQIFPGQKT----THFANLKKATGIEYKDM 84 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l-~~~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~ 84 (280)
.+.+.||+.++|+.|.+. |.++|.|++.. ..++.+++.+.- ..+|+ .++..... +.+.+-++.+|-+++++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~-~ya~~v~~~ldp~~~~~~--~~~~r~~~~~~~~~~~KdL~~l~~~~~~v 109 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASE-EYAEPVLDALDPNGKLFS--RRLYRDDCTFDKGSYIKDLSKLGRDLDNV 109 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-H-HHHHHHHHHHTTTTSSEE--EEEEGGGSEEETTEEE--GGGSSS-GGGE
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehh-hhhhHHHHhhhhhccccc--cccccccccccccccccchHHHhhccccE
Confidence 467899999999999665 99999999999 999999999986 56787 44433211 11234455567789999
Q ss_pred EEEeCCcccccccccCC
Q psy8911 85 VFFDDEERNSHDVSPLG 101 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G 101 (280)
|+|||++.....-...+
T Consensus 110 vivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 110 VIVDDSPRKWALQPDNG 126 (159)
T ss_dssp EEEES-GGGGTTSGGGE
T ss_pred EEEeCCHHHeeccCCce
Confidence 99999987644333333
No 303
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.17 E-value=0.00053 Score=61.05 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=40.1
Q ss_pred cCCChhHHHHHHHHh--------CC-----CCccEEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911 63 PGQKTTHFANLKKAT--------GI-----EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 63 ~~~~~~~~~~~~~~~--------g~-----~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~ 111 (280)
+.+....|..+++.+ ++ ++++++||||+. .||.+|+++||.+++|.+|.
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~ 294 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGV 294 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccc
Confidence 445555588888877 43 457999999997 89999999999999998874
No 304
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=97.15 E-value=0.0014 Score=55.60 Aligned_cols=209 Identities=15% Similarity=0.166 Sum_probs=119.4
Q ss_pred CCceEEEecCCCchHHHHHHHhhc---Cccccccccceec-CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911 27 NNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIFP-GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 102 (280)
Q Consensus 27 ~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~~-~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~ 102 (280)
.-+.+.|+|+++. +..-++++.. ||. +.. .+++ +..+..|..+. ++ -||.--...|++.|.++|+
T Consensus 35 ~~VEVVllSRNsp-dTGlRv~nSI~hygL~--ItR-~~ft~G~~~~~Yl~af---~v----~LFLSan~~DV~~Ai~~G~ 103 (264)
T PF06189_consen 35 PLVEVVLLSRNSP-DTGLRVFNSIRHYGLD--ITR-AAFTGGESPYPYLKAF---NV----DLFLSANEDDVQEAIDAGI 103 (264)
T ss_pred CceEEEEEecCCH-HHHHHHHHhHHHhCCc--cee-eeecCCCCHHHHHHHh---CC----ceEeeCCHHHHHHHHHcCC
Confidence 3577899998888 6666655443 442 221 2333 44454465554 33 3788888899999999999
Q ss_pred eEEEEcCCCchhhhhccccccccceeEEEecCCCCCCccccccc--CcccccC-CeeE-ccCCceeccCCCHHHHHHHHh
Q psy8911 103 TCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLV--APFKKIG-QKVM-DAKGTLIKYYRGVPEILRYLK 178 (280)
Q Consensus 103 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~--~~~~~~~-~~~~-~~~~~~~~~~~g~~~~L~~L~ 178 (280)
.+..+.......... ... --+.||-|++|.+.+..... ..+.... ++.. ......--++......|.+|+
T Consensus 104 ~Aa~v~~~~~~~~~~--~~q----lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ 177 (264)
T PF06189_consen 104 PAATVLPSPPDDDES--DDQ----LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQ 177 (264)
T ss_pred CcEEeecCCCCCCCC--CCc----eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHH
Confidence 988875432211110 001 23589999999864332111 1110000 0000 000111224444555555555
Q ss_pred hC------CcEEEEEcCCCcHHH--HHHHHhhCCCc---cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCc
Q psy8911 179 EN------KCLVAAASRTSEILH--AKQILNLINLN---QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNS 247 (280)
Q Consensus 179 ~~------g~~~~i~T~~~~~~~--~~~~l~~~gl~---~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di 247 (280)
++ =++++++|..+.+.. +-+.|+..|+. -+|- ++-+|.+.+..+ .| =+||+|....+
T Consensus 178 ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFL----gG~~K~~vL~~~------~p--hIFFDDQ~~H~ 245 (264)
T PF06189_consen 178 KKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFL----GGLPKGPVLKAF------RP--HIFFDDQDGHL 245 (264)
T ss_pred HhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHh----CCCchhHHHHhh------CC--CEeecCchhhh
Confidence 43 388999998855554 33446666664 2332 223554433322 22 38999999999
Q ss_pred ccccccCceEEEECCCCC
Q psy8911 248 HDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 248 ~~a~~aG~~~i~v~~g~~ 265 (280)
+.|. .+++++.|++|..
T Consensus 246 ~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 246 ESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred hHhh-cCCCEEeccCCcC
Confidence 9999 8999999999864
No 305
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.10 E-value=0.00094 Score=64.87 Aligned_cols=88 Identities=9% Similarity=0.061 Sum_probs=68.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.||+.+.+++|++.|+++.++|.... ..++.+-+.+|+.++|- .....+|....+.. ++. -..+.|+||..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~-~ta~~iA~~lGI~~v~a--~~~PedK~~~v~~l-q~~---g~~VamvGDG~ 518 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNR-LTAAAIAAEAGVDDFIA--EATPEDKIALIRQE-QAE---GKLVAMTGDGT 518 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCEEEc--CCCHHHHHHHHHHH-HHc---CCeEEEECCCc
Confidence 6789999999999999999999999999 89999999999977665 33222222223333 222 34699999999
Q ss_pred ccccccccCCCeEEE
Q psy8911 92 RNSHDVSPLGVTCIL 106 (280)
Q Consensus 92 ~~i~aa~~~G~~~i~ 106 (280)
+|..+-++++.-...
T Consensus 519 NDapAL~~AdvGiAm 533 (675)
T TIGR01497 519 NDAPALAQADVGVAM 533 (675)
T ss_pred chHHHHHhCCEeEEe
Confidence 999999988876543
No 306
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.09 E-value=0.00088 Score=49.10 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=44.5
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v 87 (280)
-+++||+.++|+.|+++|+++.++||++. .. ....|+.+|+.---+ .|+++..... ..+++. -....+.++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~-~s~~~~~~~L~~~Gi~~~~~--~i~ts~~~~~--~~l~~~-~~~~~v~vl 86 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSS-RSREEYAKKLKKLGIPVDED--EIITSGMAAA--EYLKEH-KGGKKVYVL 86 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SS-S-HHHHHHHHHHTTTT--GG--GEEEHHHHHH--HHHHHH-TTSSEEEEE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCC-CCHHHHHHHHHhcCcCCCcC--EEEChHHHHH--HHHHhc-CCCCEEEEE
Confidence 46899999999999999999999999985 33 333457778764344 6666544321 222221 234556666
Q ss_pred eC
Q psy8911 88 DD 89 (280)
Q Consensus 88 ~D 89 (280)
|-
T Consensus 87 G~ 88 (101)
T PF13344_consen 87 GS 88 (101)
T ss_dssp S-
T ss_pred cC
Confidence 64
No 307
>KOG2882|consensus
Probab=97.08 E-value=0.00088 Score=57.76 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCCccEEEEeCCcc-cccccccCCCeEEEEcCCCch
Q psy8911 69 HFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCILVEDGMTN 113 (280)
Q Consensus 69 ~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~~~ 113 (280)
.+..+.++.+++|++|+||||+.. ||.-++++|++++++.+|...
T Consensus 229 m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~ 274 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTT 274 (306)
T ss_pred HHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCc
Confidence 388999999999999999999965 999999999999999887653
No 308
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.95 E-value=0.0015 Score=63.81 Aligned_cols=83 Identities=13% Similarity=0.206 Sum_probs=66.9
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.|++.+.++.||++|+++.++|.-.. ..++.+-+.+|+++++- .+.+.+|....+.+.+ .-..+.||||..
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~-~~A~~iA~~lGId~v~A--ellPedK~~~V~~l~~----~g~~VamVGDGI 609 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNR-RTAEAIAKELGIDEVRA--ELLPEDKAEIVRELQA----EGRKVAMVGDGI 609 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcChHhhec--cCCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence 5789999999999999999999999999 99999999999988887 6666666654444432 227899999999
Q ss_pred ccccccccCC
Q psy8911 92 RNSHDVSPLG 101 (280)
Q Consensus 92 ~~i~aa~~~G 101 (280)
+|.-|-..|-
T Consensus 610 NDAPALA~Ad 619 (713)
T COG2217 610 NDAPALAAAD 619 (713)
T ss_pred hhHHHHhhcC
Confidence 9955544443
No 309
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=96.93 E-value=0.0042 Score=53.33 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=73.5
Q ss_pred cCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH---HHHhhCCCc--c-------ccc----------------cceE-ec
Q psy8911 166 YYRGVPEILRYLKENKCLVAAASRTSEILHAK---QILNLINLN--Q-------YFS----------------NKEI-YP 216 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~---~~l~~~gl~--~-------~f~----------------~~~~-~~ 216 (280)
.=+.+.++++.|+.+|+++..+|.. .+.+.. +.|+.+||+ + ++. ++.. .+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~-~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTAR-GPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCC-ChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 4579999999999999999999999 666543 446666764 1 110 0111 11
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccc----cCceEEEECCC
Q psy8911 217 GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP----LGVTCIHVKKG 263 (280)
Q Consensus 217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~----aG~~~i~v~~g 263 (280)
-+|.+.+..++.+.|..|+.+|||+|+..++.+..+ .|+..+++.+.
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 267788999999999999999999999999877655 68888888754
No 310
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.91 E-value=0.00094 Score=54.81 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=52.3
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------HHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCC
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------LHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEY 234 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-------~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~ 234 (280)
..++++||+.++|++|++.|+.+.++|+.... ...+.+-++++...+ +.+ +..+.|. .++ .
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~-~~~-~~~~~K~--------~v~--~ 137 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY-DNL-IFTGDKT--------LVG--G 137 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH-CCE-EEESSGG--------GC----
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch-heE-EEecCCC--------eEe--c
Confidence 46789999999999999999767666666232 222333344443222 222 2333332 112 2
Q ss_pred CcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 235 KDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
+ ++|+|++.++..+...|++++++...
T Consensus 138 D--vlIDD~~~n~~~~~~~g~~~iLfd~p 164 (191)
T PF06941_consen 138 D--VLIDDRPHNLEQFANAGIPVILFDQP 164 (191)
T ss_dssp S--EEEESSSHHHSS-SSESSEEEEE--G
T ss_pred c--EEecCChHHHHhccCCCceEEEEcCC
Confidence 2 89999999999999999999999743
No 311
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.89 E-value=0.0039 Score=61.90 Aligned_cols=97 Identities=10% Similarity=0.039 Sum_probs=68.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-ccc-----------------------ceEecCCCH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSN-----------------------KEIYPGPKT 220 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f~~-----------------------~~~~~~~k~ 220 (280)
++.|++++.++.|++.|+++.++|+- .+..+..+.+++||.+- +.. ..++..-.|
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGD-HLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 57799999999999999999999999 89999999999999751 100 012333333
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 221 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
+.=..+.+.++-.-+-+.|+||..+|..+-++|.+- |.+..|
T Consensus 521 e~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~g 562 (755)
T TIGR01647 521 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGA 562 (755)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCC
Confidence 332233333333446788999999998888887665 334444
No 312
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.85 E-value=0.0044 Score=62.42 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=67.8
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES 225 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~ 225 (280)
++.|++++.+++|++.|+++.++|+- .+..+..+.+.+||.. ... ...++..-.|+.=..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 56799999999999999999999999 8999999999999962 110 012233333333222
Q ss_pred HHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
+.+.++-.-+.+.|+||..+|..+-++|.+-.. +..|
T Consensus 594 iV~~lq~~G~vVam~GDGvNDapALk~AdVGIA-mg~g 630 (867)
T TIGR01524 594 IIGLLKKAGHTVGFLGDGINDAPALRKADVGIS-VDTA 630 (867)
T ss_pred HHHHHHhCCCEEEEECCCcccHHHHHhCCEEEE-eCCc
Confidence 222222233578899999999999988876633 3344
No 313
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.72 E-value=0.0025 Score=53.14 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=54.3
Q ss_pred eEEEecCCCchHHHHHHHhhcCccccccc--cceecC--CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 30 LVAAASRTSEIQGAQQLLDLFNWNQYFDH--KQIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 30 ~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~--~~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.+.++++... ..++..++..++..++.. ..+... +|...++.+++.+|++++++++|||+.+|+.+.+.+|+...
T Consensus 109 ~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 109 LVIMREGKDV-DEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred EEEecCCccH-HHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 3445566565 667777777776554321 112221 23334999999999999999999999999999999997755
Q ss_pred EE
Q psy8911 106 LV 107 (280)
Q Consensus 106 ~v 107 (280)
.-
T Consensus 188 m~ 189 (215)
T TIGR01487 188 VA 189 (215)
T ss_pred cC
Confidence 43
No 314
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.71 E-value=0.0059 Score=48.23 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=68.4
Q ss_pred EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HHHHHhhC--
Q psy8911 129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQILNLI-- 203 (280)
Q Consensus 129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~~~l~~~-- 203 (280)
+++|.|||+.-+....+. ....+.. ...+|+.++...++++||++.-+|+. +... .+..|+..
T Consensus 2 VvsDIDGTiT~SD~~G~i----------~~~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaR-p~~qa~~Tr~~L~~~~q 69 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHI----------LPILGKD-WTHPGAAELYRKIADNGYKILYLTAR-PIGQANRTRSWLAQHQQ 69 (157)
T ss_pred EEEeccCCcCccchhhhh----------hhccCch-hhhhcHHHHHHHHHHCCeEEEEECcC-cHHHHHHHHHHHHHHHh
Confidence 578999999876543321 1112222 57799999999999999999999999 5443 34455554
Q ss_pred ---CCccc---cc------cc--eEecCCCHHHH-HHHHHHcC--CCCCcEE---EEeCCcCCcccccccCce
Q psy8911 204 ---NLNQY---FS------NK--EIYPGPKTTHF-ESLKKATG--IEYKDMV---FFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 204 ---gl~~~---f~------~~--~~~~~~k~~~~-~~~~~~~~--~~~~~~l---~igD~~~di~~a~~aG~~ 256 (280)
+|.+- +. .. +.. ..+++.| ..+++.+. +++.... -+|++..|+.+=+++|++
T Consensus 70 ~~~~lP~Gpv~~sP~~l~~al~rEvi-~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 70 QGHNLPDGPVLLSPDSLFSALHREVI-SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred CCccCCCCCEEECCcchhhhhhcccc-ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 33211 11 00 000 1344444 22223221 1222222 479999999999999974
No 315
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.71 E-value=0.006 Score=61.70 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=65.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES 225 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~ 225 (280)
++.|++++.++.|++.|+++.++|+- .+..+..+.+.+||.+ ... ...++..-.|+.=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 56799999999999999999999999 8999999999999962 000 012233333433233
Q ss_pred HHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911 226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~ 256 (280)
+.+.++-.-+-+.|+||..+|..+-++|.+-
T Consensus 629 IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG 659 (902)
T PRK10517 629 IVTLLKREGHVVGFMGDGINDAPALRAADIG 659 (902)
T ss_pred HHHHHHHCCCEEEEECCCcchHHHHHhCCEE
Confidence 3333333345688999999998888887654
No 316
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.66 E-value=0.0062 Score=61.99 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc---------cc------------cceEecCCCHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY---------FS------------NKEIYPGPKTTHF 223 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~---------f~------------~~~~~~~~k~~~~ 223 (280)
++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||.+- |+ ...++..-.|+.=
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 57799999999999999999999999 99999999999999631 11 1123333333332
Q ss_pred HHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911 224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~ 256 (280)
..+.+.++-.-+-+.|+||..+|..+-++|-+-
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG 690 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG 690 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc
Confidence 222233322335788999999998888886443
No 317
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=96.65 E-value=0.0058 Score=51.28 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=67.4
Q ss_pred ceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 29 CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 29 ~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
+.+-|-|.+-.|..++-+| ++|.++|...-|+++.++++ |+++.+++|-+....++|||....-.||+..+|..+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 4444444445544444333 46778998778999988876 999999999988999999999999999999999999
Q ss_pred EEcCCCchhhhhc
Q psy8911 106 LVEDGMTNAITLY 118 (280)
Q Consensus 106 ~v~~~~~~~~~~~ 118 (280)
-+....+...+..
T Consensus 255 ~I~~h~Dl~~l~~ 267 (274)
T TIGR01658 255 KIDLHPDSSHRFP 267 (274)
T ss_pred EeecCCCHHHhCc
Confidence 8876665544433
No 318
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.61 E-value=0.0052 Score=51.43 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=51.3
Q ss_pred eEEEecCCCchHHHHHHHhhcCccccc---c-ccceecC--CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCe
Q psy8911 30 LVAAASRTSEIQGAQQLLDLFNWNQYF---D-HKQIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 103 (280)
Q Consensus 30 ~~~i~Sn~~~~~~~~~~l~~~~l~~~f---d-~~~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~ 103 (280)
...+.+.... +.++.+++.++..-.+ . ...+... +|...++.+++.+|++++++++|||+.+|+.+.+.+|..
T Consensus 109 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 187 (225)
T TIGR01482 109 LVKMRYGIDV-DTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG 187 (225)
T ss_pred eEEEeecCCH-HHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce
Confidence 3455555555 5677777777643111 0 0112221 233349999999999999999999999999999999986
Q ss_pred EE
Q psy8911 104 CI 105 (280)
Q Consensus 104 ~i 105 (280)
..
T Consensus 188 va 189 (225)
T TIGR01482 188 VA 189 (225)
T ss_pred EE
Confidence 44
No 319
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.49 E-value=0.0079 Score=49.68 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=46.7
Q ss_pred ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
.++.++..|+||||+++ .. +. ..+.+++..|++.|+++..+|++ .........+.+
T Consensus 5 ~~~~lIFtDlD~TLl~~-~y-------------------e~---~pA~pv~~el~d~G~~Vi~~SSK-T~aE~~~l~~~l 60 (274)
T COG3769 5 QMPLLIFTDLDGTLLPH-SY-------------------EW---QPAAPVLLELKDAGVPVILCSSK-TRAEMLYLQKSL 60 (274)
T ss_pred ccceEEEEcccCcccCC-CC-------------------CC---CccchHHHHHHHcCCeEEEeccc-hHHHHHHHHHhc
Confidence 35677788999999872 11 11 34778999999999999999999 887777788888
Q ss_pred CCc
Q psy8911 204 NLN 206 (280)
Q Consensus 204 gl~ 206 (280)
|+.
T Consensus 61 ~v~ 63 (274)
T COG3769 61 GVQ 63 (274)
T ss_pred CCC
Confidence 886
No 320
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.44 E-value=0.0094 Score=60.32 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=67.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES 225 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~ 225 (280)
++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||.. ... ...++..-.|+.=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 56799999999999999999999999 8999999999999962 000 001233333333222
Q ss_pred HHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
+.+.++-.-+-+.|+||..+|..+-++|.+- |.+..|
T Consensus 629 iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~g 665 (903)
T PRK15122 629 VLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSG 665 (903)
T ss_pred HHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcc
Confidence 2333333345688999999998888887665 334344
No 321
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.44 E-value=0.0044 Score=52.51 Aligned_cols=54 Identities=22% Similarity=0.146 Sum_probs=41.1
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++.+|+||||++... .+. ...++++ ++++|++++++|++ ....+...++.+++.
T Consensus 1 li~~DlDgTLl~~~~--------------------~~~---~~~~~~~-~~~~gi~~viaTGR-~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDE--------------------GLA---SFVELLR-GSGDAVGFGIATGR-SVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHH--------------------HHH---HHHHHHH-hcCCCceEEEEeCC-CHHHHHHHHHhCCCC
Confidence 367899999986211 122 2336776 69999999999999 899999999998875
No 322
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.39 E-value=0.012 Score=60.59 Aligned_cols=92 Identities=10% Similarity=-0.077 Sum_probs=65.6
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-c--------cc----------------------ce
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-F--------SN----------------------KE 213 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f--------~~----------------------~~ 213 (280)
++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||.+- + +. ..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGD-FPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 57799999999999999999999999 99999999999999531 0 00 01
Q ss_pred EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911 214 IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 257 (280)
Q Consensus 214 ~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~ 257 (280)
++..-.|+.=..+.+.++-.-+-+.|+||..+|..+-++|.+-.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 22222333322233333333467889999999999888876543
No 323
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.36 E-value=0.017 Score=48.62 Aligned_cols=98 Identities=13% Similarity=0.102 Sum_probs=64.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecC-CChh----HHHHHHH-HhCC
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPG-QKTT----HFANLKK-ATGI 79 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~-~~~~----~~~~~~~-~~g~ 79 (280)
...++.|+++++++.|+++|++++++|+-+. .. ...-|...|+..+ ++ .+.-+ .+.. .|+.-.+ ++--
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e-~~r~~T~~nL~~~G~~~~-~~-LiLR~~~d~~~~~~~yKs~~R~~l~~ 193 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWE-ELRNATLDNLINAGFTGW-KH-LILRGLEDSNKTVVTYKSEVRKSLME 193 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHHHHcCCCCc-Ce-eeecCCCCCCchHhHHHHHHHHHHHh
Confidence 4568899999999999999999999999997 55 5566777786554 52 22222 1111 1443332 1211
Q ss_pred C-CccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 80 E-YKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
. -.=...|||...|+.+ -.+|.++.-+|++
T Consensus 194 ~GYrIv~~iGDq~sDl~G-~~~~~RtFKLPNP 224 (229)
T TIGR01675 194 EGYRIWGNIGDQWSDLLG-SPPGRRTFKLPNP 224 (229)
T ss_pred CCceEEEEECCChHHhcC-CCccCceeeCCCC
Confidence 1 1225678999999865 4567777777665
No 324
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.26 E-value=0.14 Score=49.77 Aligned_cols=42 Identities=12% Similarity=0.214 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEE--eCCcCCcccccccCceEEE
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFF--DDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~i--gD~~~di~~a~~aG~~~i~ 259 (280)
.|...++.+++.++++.++++.| ||+.+|+..-+.+|..++.
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 66788999999999999999999 9999999998888876554
No 325
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.25 E-value=0.013 Score=53.79 Aligned_cols=90 Identities=21% Similarity=0.250 Sum_probs=74.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc----cccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW----NQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l----~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v 87 (280)
++|....+.++.|+++|+-++|+|-+.. ..++.+.++++- .+.|+...+-..++....+.+++++++-.+..+|+
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~-~da~evF~khp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFi 333 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTE-KDAKEVFRKHPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFI 333 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCch-hhHHHHHhhCCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEe
Confidence 3455678899999999999999999988 888888888751 24566334445577888999999999999999999
Q ss_pred eCCcccccccccCCC
Q psy8911 88 DDEERNSHDVSPLGV 102 (280)
Q Consensus 88 ~D~~~~i~aa~~~G~ 102 (280)
||++...+-.++-+=
T Consensus 334 DD~p~ErE~vk~~~~ 348 (574)
T COG3882 334 DDNPAERELVKRELP 348 (574)
T ss_pred cCCHHHHHHHHhcCc
Confidence 999999888888665
No 326
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.21 E-value=0.014 Score=56.93 Aligned_cols=93 Identities=11% Similarity=0.151 Sum_probs=68.3
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.||+.+.+++||+.|+++.++|.-+. ..++.+-+.+|+.++|- .....+|. .+-+.+++.| +-+.|+||..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGId~v~A--~~~PedK~-~iV~~lQ~~G---~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFLA--EATPEDKL-ALIRQEQAEG---RLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcEEEc--cCCHHHHH-HHHHHHHHcC---CeEEEECCCc
Confidence 4689999999999999999999999999 89999999999976655 22221221 1333333333 5589999999
Q ss_pred ccccccccCCCeEEEEcCCCc
Q psy8911 92 RNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 92 ~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+|.-|-++|.+-...- .|.+
T Consensus 518 NDAPALa~ADVGIAMg-sGTd 537 (679)
T PRK01122 518 NDAPALAQADVGVAMN-SGTQ 537 (679)
T ss_pred chHHHHHhCCEeEEeC-CCCH
Confidence 9988888877654433 4443
No 327
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.20 E-value=0.013 Score=57.16 Aligned_cols=93 Identities=11% Similarity=0.130 Sum_probs=69.3
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.|++.+.+++||+.|+++.++|.-+. ..++.+-+.+|+.++|- .+...+|. .+-+.+++.| +-+.|+||..
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGI~~v~A--~~~PedK~-~iV~~lQ~~G---~~VaMtGDGv 513 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNE-LTAATIAKEAGVDRFVA--ECKPEDKI-NVIREEQAKG---HIVAMTGDGT 513 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCceEEc--CCCHHHHH-HHHHHHHhCC---CEEEEECCCh
Confidence 6789999999999999999999999999 99999999999987766 33222222 2333334333 5688999999
Q ss_pred ccccccccCCCeEEEEcCCCc
Q psy8911 92 RNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 92 ~~i~aa~~~G~~~i~v~~~~~ 112 (280)
+|.-|-++|.+-.. ...+.+
T Consensus 514 NDAPALa~ADVGIA-MgsGTd 533 (673)
T PRK14010 514 NDAPALAEANVGLA-MNSGTM 533 (673)
T ss_pred hhHHHHHhCCEEEE-eCCCCH
Confidence 99888888876433 334443
No 328
>PLN03017 trehalose-phosphatase
Probab=96.18 E-value=0.0099 Score=53.47 Aligned_cols=56 Identities=13% Similarity=-0.024 Sum_probs=41.8
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 201 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~ 201 (280)
-++.+|+||||.+.... .....+-++..+.|+.|. +|++++|+|+. ....+...+.
T Consensus 112 ~llflD~DGTL~Piv~~-----------------p~~a~i~~~~~~aL~~La-~~~~vaIvSGR-~~~~l~~~~~ 167 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDD-----------------PDKAFMSSKMRRTVKKLA-KCFPTAIVTGR-CIDKVYNFVK 167 (366)
T ss_pred eEEEEecCCcCcCCcCC-----------------cccccCCHHHHHHHHHHh-cCCcEEEEeCC-CHHHHHHhhc
Confidence 36678999999853221 122356789999999999 77999999999 7777766544
No 329
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.14 E-value=0.0052 Score=48.47 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=63.2
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEec-CCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYP-GPKTTHFESLKKATGIEYKDMVFFD 241 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~l~ig 241 (280)
..+-.++...|..++++ .+++-+|.. .....+..-..+.+. -.++.+.+.+ ..|. .+.+..+++ +||+
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar-~~dl~~iT~~~l~~q~ih~~~l~i~g~h~KV----~~vrth~id----lf~e 140 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITAR-KADLTRITYAWLFIQNIHYDHLEIVGLHHKV----EAVRTHNID----LFFE 140 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehh-hHHHHHHHHHHHHHhccchhhhhhhcccccc----hhhHhhccC----cccc
Confidence 44557888899999988 567777776 555544433333332 2344443333 3443 445666665 7899
Q ss_pred CCcCC-cccccccCceEEEECCCCCHHHHHHH
Q psy8911 242 DEERN-SHDVSPLGVTCIHVKKGMSHAVLQKG 272 (280)
Q Consensus 242 D~~~d-i~~a~~aG~~~i~v~~g~~~~~~~~~ 272 (280)
|+..+ ++.|+++|++++.+...++.....+.
T Consensus 141 d~~~na~~iAk~~~~~vilins~ynRkp~~~n 172 (194)
T COG5663 141 DSHDNAGQIAKNAGIPVILINSPYNRKPAAKN 172 (194)
T ss_pred ccCchHHHHHHhcCCcEEEecCcccccchHHH
Confidence 98775 66777799999999876655444433
No 330
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.11 E-value=0.0048 Score=52.31 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 217 GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
.+|...++.+++++|++++++++|||+.+|+...+.+|... .|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~n 202 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGN 202 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence 37888999999999999999999999999999999888654 4543
No 331
>PLN02423 phosphomannomutase
Probab=96.10 E-value=0.012 Score=50.42 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=37.8
Q ss_pred ce-eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 126 SN-HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 126 ~~-~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
++ ++.||+||||++. .. .+-+...+.|++|+++ ++++++|+. ........+..
T Consensus 6 ~~~i~~~D~DGTLl~~--------------------~~--~i~~~~~~ai~~l~~~-i~fviaTGR-~~~~~~~~~~~ 59 (245)
T PLN02423 6 PGVIALFDVDGTLTAP--------------------RK--EATPEMLEFMKELRKV-VTVGVVGGS-DLSKISEQLGK 59 (245)
T ss_pred cceEEEEeccCCCcCC--------------------CC--cCCHHHHHHHHHHHhC-CEEEEECCc-CHHHHHHHhcc
Confidence 44 4459999999852 11 2347789999999977 999999999 65555444443
No 332
>KOG2470|consensus
Probab=96.10 E-value=0.0073 Score=53.11 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=68.7
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccceEec-CCC-------H---------------
Q psy8911 167 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYP-GPK-------T--------------- 220 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~~~~~-~~k-------~--------------- 220 (280)
-|....+|+.|+.+|.++.++||+ +-..++.-+..+ .+.++||.+++.. +|+ |
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNS-PysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNS-PYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCC-chhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 356678899999999999999999 888887766665 4557888654321 110 0
Q ss_pred ------------HHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEEC
Q psy8911 221 ------------THFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVK 261 (280)
Q Consensus 221 ------------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~ 261 (280)
..+...++..|..-.++++|||.+. |+.... +.|+++-++-
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 1156677777888999999999998 666665 6888876653
No 333
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.09 E-value=0.018 Score=54.42 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=60.4
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
.+.|++.++++.|++.|+++.++|+. ....+..+-+.+|+ |. ...+..|......+ ++.| ..+.|+||..
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD-~~~~a~~ia~~lgi---~~--~~~p~~K~~~v~~l-~~~g---~~v~~vGDg~ 416 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGD-NVLTAKAIAKELGI---FA--RVTPEEKAALVEAL-QKKG---RVVAMTGDGV 416 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCc---ee--ccCHHHHHHHHHHH-HHCC---CEEEEECCCh
Confidence 57799999999999999999999999 89999999999997 11 11112233333333 2323 7799999999
Q ss_pred CCcccccccCc
Q psy8911 245 RNSHDVSPLGV 255 (280)
Q Consensus 245 ~di~~a~~aG~ 255 (280)
+|..+-+.|++
T Consensus 417 nD~~al~~Adv 427 (499)
T TIGR01494 417 NDAPALKKADV 427 (499)
T ss_pred hhHHHHHhCCC
Confidence 99877777653
No 334
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=96.05 E-value=0.012 Score=49.89 Aligned_cols=93 Identities=13% Similarity=0.176 Sum_probs=59.3
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceecC-C----------ChhHHHHHHHH-
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFPG-Q----------KTTHFANLKKA- 76 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~~-~----------~~~~~~~~~~~- 76 (280)
-++.||+.++++.++++|+.|+++||-+.. +....-|++.|...+ +. .+..+ . |......+.++
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~-l~lr~~~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DH-LILRPDKDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SC-GEEEEESSTSS------SHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-ch-hccccccccccccccccchHHHHHHHHcC
Confidence 488999999999999999999999998772 233345666675432 42 22222 1 11224444444
Q ss_pred hCCCCccEEEEeCCcccccccccC---CCeEEEEcC
Q psy8911 77 TGIEYKDMVFFDDEERNSHDVSPL---GVTCILVED 109 (280)
Q Consensus 77 ~g~~p~~~l~v~D~~~~i~aa~~~---G~~~i~v~~ 109 (280)
+.+ +++|||...|+.+++.. |-+.+-+|+
T Consensus 192 y~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 192 YRI----IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp EEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred CcE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 333 88999999999985443 334454444
No 335
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.00 E-value=0.015 Score=58.68 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=65.9
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--ccc-----------------ccceecCCChh---H
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFD-----------------HKQIFPGQKTT---H 69 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd-----------------~~~i~~~~~~~---~ 69 (280)
++.|++.+.+++|+++|+++.++|..+. ..+..+-+.+|+.. ... ...+++.-.+. .
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~-~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNE-IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 6789999999999999999999999999 89999999999852 000 00122221111 1
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
+-+.+++.| +.+.|+||..+|.-|-++|.+-...
T Consensus 594 iV~~lq~~G---~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 594 IIGLLKKAG---HTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred HHHHHHhCC---CEEEEECCCcccHHHHHhCCEEEEe
Confidence 334444443 5799999999999988888876443
No 336
>KOG0207|consensus
Probab=95.99 E-value=0.02 Score=56.40 Aligned_cols=78 Identities=10% Similarity=0.162 Sum_probs=60.8
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
++.|++...+..||+.|++++++|+- ....++...+++|++..+.. ..+..|.+.++++.+. ..-+.||||..
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGD-n~~aA~svA~~VGi~~V~ae--v~P~~K~~~Ik~lq~~----~~~VaMVGDGI 795 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGD-NDAAARSVAQQVGIDNVYAE--VLPEQKAEKIKEIQKN----GGPVAMVGDGI 795 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCC-CHHHHHHHHHhhCcceEEec--cCchhhHHHHHHHHhc----CCcEEEEeCCC
Confidence 46799999999999999999999999 88999999999996655542 2334555556555433 36789999999
Q ss_pred CCccc
Q psy8911 245 RNSHD 249 (280)
Q Consensus 245 ~di~~ 249 (280)
+|--+
T Consensus 796 NDaPA 800 (951)
T KOG0207|consen 796 NDAPA 800 (951)
T ss_pred CccHH
Confidence 99443
No 337
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.96 E-value=0.03 Score=48.06 Aligned_cols=98 Identities=20% Similarity=0.264 Sum_probs=68.7
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHH---HhhcCcc--cc-cccc--------------------ce-ecC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQL---LDLFNWN--QY-FDHK--------------------QI-FPG 64 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~---l~~~~l~--~~-fd~~--------------------~i-~~~ 64 (280)
..-+.+.++++.|+++|+++..+|..+. ...... |+.+|+. .. |..- .| +++
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~-~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGP-NMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCCh-hhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 4467899999999999999999999987 554444 4445542 11 1100 11 111
Q ss_pred --CChhHHHHHHHHhCCCCccEEEEeCCcccccc----cccCCCeEEEEcCC
Q psy8911 65 --QKTTHFANLKKATGIEYKDMVFFDDEERNSHD----VSPLGVTCILVEDG 110 (280)
Q Consensus 65 --~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~a----a~~~G~~~i~v~~~ 110 (280)
++...+...+.++|..|+.+|||||+..++++ +++.|+.-+++.+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 23334999999999999999999999988654 44578877777554
No 338
>PLN02151 trehalose-phosphatase
Probab=95.96 E-value=0.013 Score=52.51 Aligned_cols=57 Identities=16% Similarity=0.017 Sum_probs=43.5
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.++.+|+||||.+... ......+-|++.+.|+.|.+ +.+++|+|+. ....+...+.-
T Consensus 99 ~ll~lDyDGTL~PIv~-----------------~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR-~~~~l~~~~~~ 155 (354)
T PLN02151 99 IVMFLDYDGTLSPIVD-----------------DPDRAFMSKKMRNTVRKLAK-CFPTAIVSGR-CREKVSSFVKL 155 (354)
T ss_pred eEEEEecCccCCCCCC-----------------CcccccCCHHHHHHHHHHhc-CCCEEEEECC-CHHHHHHHcCC
Confidence 3678899999986321 22345677999999999995 4799999999 78877777654
No 339
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=95.90 E-value=0.015 Score=48.91 Aligned_cols=88 Identities=11% Similarity=0.136 Sum_probs=65.5
Q ss_pred EEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911 184 VAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 260 (280)
Q Consensus 184 ~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v 260 (280)
=+++|++ ..-.+-...=-++|.++|..-.+++. .|..-|+.+.+|+|-+.-.-++|||....-++|+..+++++-+
T Consensus 178 NvLVTs~-qLVPaLaKcLLy~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I 256 (274)
T TIGR01658 178 NVLVTSG-QLIPSLAKCLLFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKI 256 (274)
T ss_pred EEEEEcC-ccHHHHHHHHHhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEe
Confidence 4566666 43333333334688999975445543 5567799999999998899999999999999999999999999
Q ss_pred CCCCCHHHHHHH
Q psy8911 261 KKGMSHAVLQKG 272 (280)
Q Consensus 261 ~~g~~~~~~~~~ 272 (280)
..+.+...+..+
T Consensus 257 ~~h~Dl~~l~~a 268 (274)
T TIGR01658 257 DLHPDSSHRFPG 268 (274)
T ss_pred ecCCCHHHhCcc
Confidence 877666555443
No 340
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.84 E-value=0.033 Score=57.14 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=38.2
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++.|++++.+++|+++|+++.++|+. .+..+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGD-HPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCC
Confidence 57799999999999999999999999 888999999999984
No 341
>PLN02580 trehalose-phosphatase
Probab=95.74 E-value=0.019 Score=52.16 Aligned_cols=58 Identities=14% Similarity=0.034 Sum_probs=45.2
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
.++.+|+||||.+.. .......+-+++.+.|+.|.+. .+++|+|+. ....++..+.-.
T Consensus 120 ~~LfLDyDGTLaPIv-----------------~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR-~~~~L~~~l~~~ 177 (384)
T PLN02580 120 IALFLDYDGTLSPIV-----------------DDPDRALMSDAMRSAVKNVAKY-FPTAIISGR-SRDKVYELVGLT 177 (384)
T ss_pred eEEEEecCCccCCCC-----------------CCcccccCCHHHHHHHHHHhhC-CCEEEEeCC-CHHHHHHHhCCC
Confidence 367789999998632 1233456778999999999998 689999999 888888777643
No 342
>KOG0207|consensus
Probab=95.74 E-value=0.03 Score=55.22 Aligned_cols=82 Identities=13% Similarity=0.223 Sum_probs=62.9
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.|++...+..||+.|++++++|.-.. ..++.+-+..|++.-+- .+...+|....+.+.+. -.-+.||||..
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~a--ev~P~~K~~~Ik~lq~~----~~~VaMVGDGI 795 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYA--EVLPEQKAEKIKEIQKN----GGPVAMVGDGI 795 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEe--ccCchhhHHHHHHHHhc----CCcEEEEeCCC
Confidence 5689999999999999999999999999 89999999999555444 44455555555555443 27799999999
Q ss_pred ccccccccC
Q psy8911 92 RNSHDVSPL 100 (280)
Q Consensus 92 ~~i~aa~~~ 100 (280)
+|--|-..|
T Consensus 796 NDaPALA~A 804 (951)
T KOG0207|consen 796 NDAPALAQA 804 (951)
T ss_pred CccHHHHhh
Confidence 995444333
No 343
>KOG2961|consensus
Probab=95.59 E-value=0.14 Score=40.02 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=68.6
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-C-cEEEEEcCCCcH-------HHH
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-K-CLVAAASRTSEI-------LHA 196 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g-~~~~i~T~~~~~-------~~~ 196 (280)
.+.+.+|.|.|+.- .......|.-..-++.++.. | .-++|+||+-.. +.+
T Consensus 43 ikavVlDKDNcit~---------------------P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~A 101 (190)
T KOG2961|consen 43 IKAVVLDKDNCITA---------------------PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKA 101 (190)
T ss_pred ceEEEEcCCCeeeC---------------------CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHH
Confidence 46889999988842 22234445555666666643 2 568999987211 112
Q ss_pred HHHHhhCCCccccccceEecCCCH----HHHHHHHHHc-CCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911 197 KQILNLINLNQYFSNKEIYPGPKT----THFESLKKAT-GIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS 265 (280)
Q Consensus 197 ~~~l~~~gl~~~f~~~~~~~~~k~----~~~~~~~~~~-~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~ 265 (280)
...-.+.||.= .-.+.-|| +.+.+....- =..++|++||||.+. ||.-|...|--.++...|..
T Consensus 102 k~le~k~gIpV-----lRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 102 KALEAKIGIPV-----LRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred HHHHHhhCCce-----EeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 22222233321 11122233 3333332211 278999999999987 99999999999999988763
No 344
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.59 E-value=0.033 Score=55.39 Aligned_cols=95 Identities=8% Similarity=0.011 Sum_probs=67.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-ccc-----------------------cceecCCCh
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-FDH-----------------------KQIFPGQKT 67 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-fd~-----------------------~~i~~~~~~ 67 (280)
++.|++.+.++.|++.|+++.++|..+. ..++.+-+.+|+.+. +.. ..++..-.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHL-AIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 6789999999999999999999999999 899999999998641 100 012222222
Q ss_pred hH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 68 TH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 68 ~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
.. +-+.+++. -+-+.|+||..+|.-|-++|.+-.. +..+.
T Consensus 521 e~K~~iV~~lq~~---G~~VamvGDGvNDapAL~~AdVGIA-m~~gt 563 (755)
T TIGR01647 521 EHKYEIVEILQKR---GHLVGMTGDGVNDAPALKKADVGIA-VAGAT 563 (755)
T ss_pred HHHHHHHHHHHhc---CCEEEEEcCCcccHHHHHhCCeeEE-ecCCc
Confidence 21 33334443 3679999999999888888776533 33443
No 345
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.58 E-value=0.093 Score=45.80 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=38.2
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF 56 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f 56 (280)
..++.+.+.|++|+++|++++++|+... ..++.+.+.+++..+|
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~-~ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTR-AQLEHLCRQLRLEHPF 61 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHhCCCCeE
Confidence 3566799999999999999999999999 7888899999986543
No 346
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.57 E-value=0.022 Score=56.47 Aligned_cols=61 Identities=20% Similarity=0.127 Sum_probs=46.4
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhh-CCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKE-NKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
+++.||+||||++.... .....+-+.+.+.|+.|.+ .|+.++|+|+. ....++..+..+++
T Consensus 493 rLi~~D~DGTL~~~~~~-----------------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR-~~~~l~~~~~~~~l 554 (726)
T PRK14501 493 RLLLLDYDGTLVPFAPD-----------------PELAVPDKELRDLLRRLAADPNTDVAIISGR-DRDTLERWFGDLPI 554 (726)
T ss_pred eEEEEecCccccCCCCC-----------------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCC-CHHHHHHHhCCCCe
Confidence 57899999999863211 1123456889999999999 59999999999 88888877775543
No 347
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.54 E-value=0.0096 Score=50.03 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=34.2
Q ss_pred HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.++.+++.+|++++++++|||+.+|+..++.+|...+
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 197 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA 197 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE
Confidence 3899999999999999999999999999999998654
No 348
>KOG1605|consensus
Probab=95.52 E-value=0.0089 Score=51.23 Aligned_cols=145 Identities=15% Similarity=0.123 Sum_probs=90.5
Q ss_pred cceeEEEecCCCCCCcccc-cc-c-CcccccCCeeEcc--CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHH
Q psy8911 125 ISNHLSKKLDYTLWPLHVH-DL-V-APFKKIGQKVMDA--KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQI 199 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~-~~-~-~~~~~~~~~~~~~--~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~ 199 (280)
..++++.|+|.||..+... +. . +.|.. ...++. +.-.+...|++.++|....+. +.+.+.|.+ ...++..+
T Consensus 88 ~kk~lVLDLDeTLvHss~~~~~~~~~d~~~--~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs-~~~Ya~~v 163 (262)
T KOG1605|consen 88 GRKTLVLDLDETLVHSSLNLKPIVNADFTV--PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTAS-LEVYADPL 163 (262)
T ss_pred CCceEEEeCCCcccccccccCCCCCcceee--eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhh-hHHHHHHH
Confidence 4478999999999876632 11 0 00100 011111 222467789999999998887 899999999 88899888
Q ss_pred HhhCCC-ccccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHH
Q psy8911 200 LNLINL-NQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGL 273 (280)
Q Consensus 200 l~~~gl-~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~ 273 (280)
+..+.= ...|......+. .+...|-+=+...+-+..++++|+|++.....=-.-|++.--.-.+....+|.+.+
T Consensus 164 ~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~Ll 240 (262)
T KOG1605|consen 164 LDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLL 240 (262)
T ss_pred HHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHH
Confidence 888764 222321100000 11222322235567788999999999997555555777766666666666655543
No 349
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.50 E-value=0.023 Score=57.56 Aligned_cols=95 Identities=12% Similarity=0.152 Sum_probs=66.9
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-------cc------------ccceecCCChhH---
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-------FD------------HKQIFPGQKTTH--- 69 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-------fd------------~~~i~~~~~~~~--- 69 (280)
++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+..- ++ ...+++.-.+..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNP-IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 6789999999999999999999999999 899999999998520 00 001222222221
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
+-+.+++.| +-+.|+||..+|.-|-++|-+-. .+..+.
T Consensus 629 iV~~Lq~~G---~vVamtGDGvNDaPALk~ADVGI-Amg~gt 666 (903)
T PRK15122 629 VLKALQANG---HTVGFLGDGINDAPALRDADVGI-SVDSGA 666 (903)
T ss_pred HHHHHHhCC---CEEEEECCCchhHHHHHhCCEEE-EeCccc
Confidence 334444433 56999999999988888877653 333443
No 350
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.49 E-value=0.024 Score=48.67 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHcCCC--CCcEEEEeCCcCCcccccccCceEEE
Q psy8911 218 PKTTHFESLKKATGIE--YKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~--~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
.|...+..+++++|++ ++++++|||+.+|+...+.+|..++.
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 6667799999999999 99999999999999999988876443
No 351
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=95.39 E-value=0.02 Score=48.97 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=39.4
Q ss_pred ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
|....+.+++.+|+++++|++|||+.+|+...+.++..++.+.+.
T Consensus 168 K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 168 KGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred hHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 333489999999999999999999999999999988888888654
No 352
>PRK10976 putative hydrolase; Provisional
Probab=95.37 E-value=0.011 Score=51.02 Aligned_cols=45 Identities=22% Similarity=0.280 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.|...++.+++++|+++++++.|||+.+|++.-+.+|.. +++.++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~-vAm~NA 234 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKG-CIMGNA 234 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence 677889999999999999999999999999999999985 444443
No 353
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.33 E-value=0.018 Score=49.14 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccccc-------CceEEEEC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHVK 261 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a-------G~~~i~v~ 261 (280)
.|...+..+++++++++.+++||||+.+|+.+++.+ |..++.|.
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 556889999999999999999999999999999988 77888884
No 354
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.31 E-value=0.054 Score=55.28 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=65.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc---------cc------------ccceecCCChhH-
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY---------FD------------HKQIFPGQKTTH- 69 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~---------fd------------~~~i~~~~~~~~- 69 (280)
++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+..- |+ ...+++.-.+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNI-DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 6789999999999999999999999999 899999999998521 11 112333322222
Q ss_pred --HHHHHHHhCCCCccEEEEeCCcccccccccCCCeE
Q psy8911 70 --FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 104 (280)
Q Consensus 70 --~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~ 104 (280)
+-..+++.| +-+.|+||..+|.-|-++|-+-.
T Consensus 658 ~~iV~~lq~~g---~vVam~GDGvNDapALk~AdVGI 691 (941)
T TIGR01517 658 QLLVLMLKDMG---EVVAVTGDGTNDAPALKLADVGF 691 (941)
T ss_pred HHHHHHHHHCC---CEEEEECCCCchHHHHHhCCcce
Confidence 344444443 47999999999988888776543
No 355
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.22 E-value=0.047 Score=55.34 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=64.6
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-------cc------------ccceecCCChhH---
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-------FD------------HKQIFPGQKTTH--- 69 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-------fd------------~~~i~~~~~~~~--- 69 (280)
++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+.+- ++ ...++..-.+..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSE-LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 6789999999999999999999999999 899999999999520 00 001222222221
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.-+.+++. -+-+.|+||..+|.-|-++|.+-..
T Consensus 629 IV~~Lq~~---G~vVam~GDGvNDaPALk~ADVGIA 661 (902)
T PRK10517 629 IVTLLKRE---GHVVGFMGDGINDAPALRAADIGIS 661 (902)
T ss_pred HHHHHHHC---CCEEEEECCCcchHHHHHhCCEEEE
Confidence 33333433 3568999999999888888776544
No 356
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.14 E-value=0.066 Score=45.48 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=59.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC--------------CChhH-HH--
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--------------QKTTH-FA-- 71 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--------------~~~~~-~~-- 71 (280)
..+.+++|+.++++.|+++++|+.|.|.+-. +..+.+|+..+ .+++.+.|++. .+.-+ |.
T Consensus 87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlg-dvI~~vL~q~~--~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn 163 (246)
T PF05822_consen 87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLG-DVIEEVLRQAG--VFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKN 163 (246)
T ss_dssp S---B-BTHHHHHHHHHCTT--EEEEEEEEH-HHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HH
T ss_pred cchhhhcCHHHHHHHHHhcCCCEEEEeCCcH-HHHHHHHHHcC--CCCCCeEEEeeeEEECCcceEeecCCCceEEeeCC
Confidence 3578999999999999999999999999999 99999999985 34454444432 11111 11
Q ss_pred -HHHH---Hh-CC-CCccEEEEeCCcccccccccC-CCe---EEEEcCCCc
Q psy8911 72 -NLKK---AT-GI-EYKDMVFFDDEERNSHDVSPL-GVT---CILVEDGMT 112 (280)
Q Consensus 72 -~~~~---~~-g~-~p~~~l~v~D~~~~i~aa~~~-G~~---~i~v~~~~~ 112 (280)
.+++ .. .+ .-.+++.+|||.-|+..|.-. ... .|++.+...
T Consensus 164 ~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~v 214 (246)
T PF05822_consen 164 ESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKV 214 (246)
T ss_dssp HHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSH
T ss_pred cccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCH
Confidence 1221 01 22 457899999999998887665 332 444444443
No 357
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.01 E-value=0.044 Score=55.03 Aligned_cols=57 Identities=16% Similarity=0.063 Sum_probs=43.7
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHH-hhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYL-KENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L-~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.+++.+|+||||++... ....+-|++.++|+.| ++.|..++|+|+. ....++..+..
T Consensus 596 ~rlI~LDyDGTLlp~~~-------------------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR-~~~~L~~~f~~ 653 (854)
T PLN02205 596 TRAILLDYDGTLMPQAS-------------------IDKSPSSKSIDILNTLCRDKNNMVFIVSAR-SRKTLADWFSP 653 (854)
T ss_pred CeEEEEecCCcccCCcc-------------------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCC-CHHHHHHHhCC
Confidence 46889999999986311 0234557899999997 7789999999999 78777777644
No 358
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=94.91 E-value=0.055 Score=46.65 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=47.9
Q ss_pred cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhC
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLI 203 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~ 203 (280)
...++.+|+||||.+... +.....+.+++.++|+.|..+. .-++|+|+. +....+..+.-.
T Consensus 17 ~~~~~~lDyDGTl~~i~~-----------------~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR-~~~~l~~~~~v~ 78 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVP-----------------HPEAAVPDDRLLSLLQDLASDPRNVVAIISGR-SLAELERLFGVP 78 (266)
T ss_pred cceEEEEecccccccccc-----------------CccccCCCHHHHHHHHHHHhcCCCeEEEEeCC-CHHHHHHhcCCC
Confidence 346889999999976322 2334678899999999999883 359999999 888888777754
Q ss_pred CC
Q psy8911 204 NL 205 (280)
Q Consensus 204 gl 205 (280)
++
T Consensus 79 ~i 80 (266)
T COG1877 79 GI 80 (266)
T ss_pred Cc
Confidence 44
No 359
>KOG2134|consensus
Probab=94.82 E-value=0.11 Score=46.61 Aligned_cols=109 Identities=18% Similarity=0.184 Sum_probs=66.9
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-----------HHH
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-----------ILH 195 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-----------~~~ 195 (280)
+.+.||+||||++.......+ ....+...++|.+..=|+.|.+.||+++|.||... +..
T Consensus 76 K~i~FD~dgtlI~t~sg~vf~----------~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~K 145 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSGKVFP----------KGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKK 145 (422)
T ss_pred ceEEEecCCceeecCCcceee----------ccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHH
Confidence 678999999999854432210 11122345789999999999999999999999732 112
Q ss_pred HHHHHhhCCCc-cccccc--eEecCCCHHHHHHHHHHc----CCCCCcEEEEeCCcC
Q psy8911 196 AKQILNLINLN-QYFSNK--EIYPGPKTTHFESLKKAT----GIEYKDMVFFDDEER 245 (280)
Q Consensus 196 ~~~~l~~~gl~-~~f~~~--~~~~~~k~~~~~~~~~~~----~~~~~~~l~igD~~~ 245 (280)
++.+...+++. ..+... ..+..|-..+.....+.. .+.-..++|+||-..
T Consensus 146 i~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaag 202 (422)
T KOG2134|consen 146 IKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAG 202 (422)
T ss_pred HHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhcc
Confidence 34445555443 112111 112235556666665554 366667779998655
No 360
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.79 E-value=0.096 Score=54.03 Aligned_cols=90 Identities=8% Similarity=-0.061 Sum_probs=64.7
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-c-------ccc-----------------------
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-D-------HKQ----------------------- 60 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d-------~~~----------------------- 60 (280)
++.|++.+.++.|+++|+++.++|..+. ..+..+-+.+|+.+-. . ...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFP-ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 6789999999999999999999999999 8999999999985321 0 001
Q ss_pred eecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 61 IFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 61 i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
+++.-.+.. +-..+++. -+-+.|+||+.+|.-+-++|.+-..
T Consensus 725 V~ar~sP~~K~~iV~~lq~~---g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRR---KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhc---CCeeEEeCCCcchHHHHHhCCccEe
Confidence 222211111 33333333 4578999999999888888876544
No 361
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.79 E-value=0.11 Score=47.64 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=75.0
Q ss_pred ceecC--CHHHHHHHHHHCCceEEEecCCCch-HHHHHHHhhcCccccccccceecCCChh-------HHHHHHHHhCCC
Q psy8911 11 IKYYP--DVPGILKYLKQNNCLVAAASRTSEI-QGAQQLLDLFNWNQYFDHKQIFPGQKTT-------HFANLKKATGIE 80 (280)
Q Consensus 11 ~~~~~--g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~~~l~~~~l~~~fd~~~i~~~~~~~-------~~~~~~~~~g~~ 80 (280)
..+|| ...++.+.+.+.|.++.++|...-| ...+.+|..+|... ..+.++.|.+.. .|..+++.-+++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~--~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDF--NNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCc--cCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 34555 5679999999999999999998543 66778888888432 223455554322 299999999999
Q ss_pred CccEEEEeCCc-ccccccccCCCeEEEEcC
Q psy8911 81 YKDMVFFDDEE-RNSHDVSPLGVTCILVED 109 (280)
Q Consensus 81 p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~ 109 (280)
|.+.+.+||.. .|...++++|+.|.+..+
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s 203 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLFYIS 203 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHHHHH
Confidence 99999999986 489999999999987633
No 362
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.71 E-value=0.049 Score=47.18 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=35.7
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN 53 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~ 53 (280)
..+...+.|++|+++|++++++|..+. ..++..++.+++.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCCC
Confidence 345688999999999999999999999 8888999999874
No 363
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=94.65 E-value=0.12 Score=53.44 Aligned_cols=41 Identities=12% Similarity=0.098 Sum_probs=38.5
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++.|++.+.++.|+++|+++.++|+- .+..+..+.+.+||.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD-~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGD-NPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCC
Confidence 57899999999999999999999999 899999999999994
No 364
>KOG2961|consensus
Probab=94.62 E-value=0.23 Score=38.74 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=63.7
Q ss_pred CCcceecCCHHHHHHHHHHC-C-ceEEEecCCCch-------HHHHHHHhhcCccccccccceecC--CChhHHHHHHH-
Q psy8911 8 GAHIKYYPDVPGILKYLKQN-N-CLVAAASRTSEI-------QGAQQLLDLFNWNQYFDHKQIFPG--QKTTHFANLKK- 75 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~-g-~~~~i~Sn~~~~-------~~~~~~l~~~~l~~~fd~~~i~~~--~~~~~~~~~~~- 75 (280)
..+....|..+.-++.+++. | ..++++||+... +.+..+-.+.|+ .++-. .++.--....+
T Consensus 57 P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gI-------pVlRHs~kKP~ct~E~~~y 129 (190)
T KOG2961|consen 57 PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGI-------PVLRHSVKKPACTAEEVEY 129 (190)
T ss_pred CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCC-------ceEeecccCCCccHHHHHH
Confidence 34556678888888888876 3 679999998651 122223333332 22222 12221222222
Q ss_pred HhC----CCCccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911 76 ATG----IEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 76 ~~g----~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~ 112 (280)
.+| ..++|.+||||+. .||--|...|.-+||..++..
T Consensus 130 ~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 130 HFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred HhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 234 7999999999996 599999999999999988754
No 365
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=94.59 E-value=0.028 Score=44.97 Aligned_cols=100 Identities=10% Similarity=0.046 Sum_probs=67.1
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHH----HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCc
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG----AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYK 82 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~----~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~ 82 (280)
+.+..-|..=+++||..=.++|=.++.+|.... -. ...+-+.+.+...-. .++.+++...++.-.-..=.+-.
T Consensus 109 ~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~-gk~d~vsk~Lak~F~i~~m~p--v~f~Gdk~k~~qy~Kt~~i~~~~ 185 (237)
T COG3700 109 WDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP-GKTDTVSKTLAKNFHITNMNP--VIFAGDKPKPGQYTKTQWIQDKN 185 (237)
T ss_pred CccccchHHHHHHHHHHHHhcCCeEEEEecCCC-CcccccchhHHhhcccCCCcc--eeeccCCCCcccccccHHHHhcC
Confidence 344444455678899999999999999997655 22 233445567766666 77777766432211111112333
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVED 109 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~ 109 (280)
--++-|||-.||.||+.+|++.|-+..
T Consensus 186 ~~IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 186 IRIHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred ceEEecCCchhhhHHHhcCccceeEEe
Confidence 468899999999999999999998743
No 366
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=94.54 E-value=0.065 Score=45.50 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=53.3
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc----------cccc--c-eEecCCCHHHH---HHH
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ----------YFSN--K-EIYPGPKTTHF---ESL 226 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~----------~f~~--~-~~~~~~k~~~~---~~~ 226 (280)
.+.+.+|+.++++.|+++++|+.|.|.+ -.+.++..|++.+... .||. . ..+.+|-...| ..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAG-lgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAG-LGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEE-EHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCC-cHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 4778899999999999999999999999 8999999999986531 2221 1 11122211111 111
Q ss_pred H------HHcCCCCCcEEEEeCCcCCccccccc
Q psy8911 227 K------KATGIEYKDMVFFDDEERNSHDVSPL 253 (280)
Q Consensus 227 ~------~~~~~~~~~~l~igD~~~di~~a~~a 253 (280)
+ ++ --...+++..||+.-|+..|...
T Consensus 167 l~~~~~~~~-~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 167 LEDSPYFKQ-LKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HTTHHHHHC-TTT--EEEEEESSSGGGGTTTT-
T ss_pred ccCchHHHH-hccCCcEEEecCccCChHhhcCC
Confidence 1 11 12467899999999998888776
No 367
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.43 E-value=0.022 Score=49.32 Aligned_cols=44 Identities=16% Similarity=0.269 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~ 262 (280)
.|...++.+++++|+++++++.|||+.+|+..-+.+|.. +.+.+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~N 231 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGN 231 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccC
Confidence 677889999999999999999999999999999999874 44444
No 368
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.43 E-value=0.07 Score=44.43 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=35.1
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
..++.||+.++++.|.++ ++-.|+|.+ ..+++++...++|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STS-Y~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTS-YTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEecc-HHHHHHHHHHhcCC
Confidence 367899999999999988 666777777 78899999998888
No 369
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.34 E-value=0.16 Score=51.73 Aligned_cols=96 Identities=10% Similarity=0.017 Sum_probs=68.4
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc------ccc-----------------eEecCCCHH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF------SNK-----------------EIYPGPKTT 221 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f------~~~-----------------~~~~~~k~~ 221 (280)
+|.+++++.++.|+++|+++.++|+- .+..+..+-+++|+..-- ++. .++..-.|+
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD-~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGD-HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCC-CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 68899999999999999999999999 999999999999976332 110 112222333
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911 222 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~ 261 (280)
+=..+.+.++=.-+-+.|.||..||.-+-|+|.+-.....
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 3233333333335678899999999999998866554443
No 370
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.34 E-value=0.12 Score=44.63 Aligned_cols=52 Identities=25% Similarity=0.353 Sum_probs=47.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK 66 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~ 66 (280)
-.-|.+.+-|..|+++|.-+++=|.+.+ +++..-++.++|.+||| .+++++.
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~-eHV~~sl~~~~L~~~Fd--~ii~~G~ 193 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNR-EHVRHSLKELKLEGYFD--IIICGGN 193 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHhCCccccE--EEEeCCc
Confidence 3568999999999999999999999999 99999999999999999 7777653
No 371
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=94.34 E-value=0.21 Score=41.12 Aligned_cols=84 Identities=13% Similarity=0.079 Sum_probs=57.0
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc--ccccceecCC--------C-----hhHHHHHH
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY--FDHKQIFPGQ--------K-----TTHFANLK 74 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~--fd~~~i~~~~--------~-----~~~~~~~~ 74 (280)
.+-..|++.++|+.+.+ .|.++|-|++.. ..++.++..+++... +....+..+. . +.....+-
T Consensus 43 ~~~kRP~l~eFL~~~~~-~feIvVwTAa~~-~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw 120 (195)
T TIGR02245 43 EELMRPYLHEFLTSAYE-DYDIVIWSATSM-KWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIW 120 (195)
T ss_pred eEEeCCCHHHHHHHHHh-CCEEEEEecCCH-HHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhh
Confidence 35679999999999999 599999999999 999999998875321 1100111110 0 11133333
Q ss_pred HHhC--CCCccEEEEeCCccccc
Q psy8911 75 KATG--IEYKDMVFFDDEERNSH 95 (280)
Q Consensus 75 ~~~g--~~p~~~l~v~D~~~~i~ 95 (280)
+.+| .+++++|+|||++....
T Consensus 121 ~~l~~~~~~~ntiiVDd~p~~~~ 143 (195)
T TIGR02245 121 ALLPEFYSMKNTIMFDDLRRNFL 143 (195)
T ss_pred hhcccCCCcccEEEEeCCHHHHh
Confidence 3454 38899999999987744
No 372
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.17 E-value=0.17 Score=52.08 Aligned_cols=41 Identities=10% Similarity=-0.015 Sum_probs=38.2
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN 53 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~ 53 (280)
+|.|++.+.++.|+++|+++.++|..+. ..+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~-~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence 6789999999999999999999999999 8999999999884
No 373
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=93.94 E-value=0.064 Score=45.42 Aligned_cols=55 Identities=20% Similarity=0.091 Sum_probs=31.1
Q ss_pred EEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhh
Q psy8911 130 SKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 130 ~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.+|+||||.+.... .....+.+++.++|+.|.+.. ..++|+|+. .....+.....
T Consensus 1 ~lDyDGTL~p~~~~-----------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR-~~~~~~~~~~~ 56 (235)
T PF02358_consen 1 FLDYDGTLAPIVDD-----------------PDAAVPPPELRELLRALAADPNNTVAIVSGR-SLDDLERFGGI 56 (235)
T ss_dssp EEE-TTTSS---S------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS--HHHHHHH-S-
T ss_pred CcccCCccCCCCCC-----------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeC-CHHHhHHhcCC
Confidence 47999999864322 234567899999999998773 469999999 66665555433
No 374
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.92 E-value=0.19 Score=47.62 Aligned_cols=82 Identities=10% Similarity=0.128 Sum_probs=60.5
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
++.|++.+.++.|++.|+++.++|..+. ..+..+-+.+|+ |- . ....+...+-..+++.| ..+.|+||..
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi---~~--~-~~p~~K~~~v~~l~~~g---~~v~~vGDg~ 416 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI---FA--R-VTPEEKAALVEALQKKG---RVVAMTGDGV 416 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc---ee--c-cCHHHHHHHHHHHHHCC---CEEEEECCCh
Confidence 6789999999999999999999999999 889999888886 21 1 11111112223333333 7799999999
Q ss_pred ccccccccCCCe
Q psy8911 92 RNSHDVSPLGVT 103 (280)
Q Consensus 92 ~~i~aa~~~G~~ 103 (280)
+|..+-+.+..-
T Consensus 417 nD~~al~~Advg 428 (499)
T TIGR01494 417 NDAPALKKADVG 428 (499)
T ss_pred hhHHHHHhCCCc
Confidence 998777776643
No 375
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.91 E-value=0.036 Score=45.64 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=33.4
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.+.++++++++++++++|||+.+|+.+++.+|+..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 899999999999999999999999999999988653
No 376
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.66 E-value=0.3 Score=42.11 Aligned_cols=99 Identities=9% Similarity=0.076 Sum_probs=61.7
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceec-CCC-----hhHHHHHHHH--hC
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFP-GQK-----TTHFANLKKA--TG 78 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~-~~~-----~~~~~~~~~~--~g 78 (280)
..++.|+++++.+.|+++|+++.++|+-+. .. ...-|++.|+..+ +. .+.- ..+ ...|+.-.++ ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e-~~r~aT~~NL~kaGy~~~-~~-LiLR~~~D~~~~~av~yKs~~R~~li~ 219 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLK-DKQAVTEANLKKAGYHTW-EK-LILKDPQDNSAENAVEYKTAARAKLIQ 219 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHHHHHcCCCCc-ce-eeecCCCCCccchhHHHHHHHHHHHHH
Confidence 567899999999999999999999999987 33 3334555566433 42 2222 111 1124433221 11
Q ss_pred CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911 79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
---.=...|||..+|+.+....+-++.-+|++.
T Consensus 220 eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~ 252 (275)
T TIGR01680 220 EGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPC 252 (275)
T ss_pred cCceEEEEECCCHHhccCCCccCcceecCCCcc
Confidence 112225778999999976663346777777663
No 377
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=93.48 E-value=0.18 Score=43.20 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=52.2
Q ss_pred HHHHHHHHhhCCcEEEEE-cCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcc
Q psy8911 170 VPEILRYLKENKCLVAAA-SRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSH 248 (280)
Q Consensus 170 ~~~~L~~L~~~g~~~~i~-T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~ 248 (280)
+.++-+.|+.+|..+-++ |++ .++|.+ -....|...++.+++++++++++++++|||.+|+.
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~----------------~~ldil-P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~ 195 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNG----------------RDLDIL-PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLE 195 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTC----------------CEEEEE-ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHH
T ss_pred HHHHHHHHHHcCCCeeEEEccc----------------eeEEEc-cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHH
Confidence 344446678888887655 443 134421 11236778899999999999999999999999976
Q ss_pred cccccCceEEEECCC
Q psy8911 249 DVSPLGVTCIHVKKG 263 (280)
Q Consensus 249 ~a~~aG~~~i~v~~g 263 (280)
.- ..+...|.|.+.
T Consensus 196 mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 196 ML-EGGDHGVVVGNA 209 (247)
T ss_dssp HH-CCSSEEEE-TTS
T ss_pred HH-cCcCCEEEEcCC
Confidence 65 777888888764
No 378
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.41 E-value=0.06 Score=45.39 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=36.3
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ 54 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~ 54 (280)
..|.+.+.|++|+++|+++.++|+.+. ..+..+++.+++.+
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~-~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTR-AEQEYYREELGVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCC
Confidence 456799999999999999999999999 77888889999754
No 379
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=93.41 E-value=0.61 Score=39.98 Aligned_cols=98 Identities=8% Similarity=-0.009 Sum_probs=59.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEec------CCCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCc--
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAAS------RTSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYK-- 82 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~S------n~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~-- 82 (280)
++-+...++.+.|++.|+....+- .... ...+..+..+ +-||. .|+.| .-+..|...++..+.++.
T Consensus 10 Rp~~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~-~~~~~~l~~l---~~~d~-iifTS~naV~~~~~~l~~~~~~~~~~ 84 (255)
T PRK05752 10 RPAEECAALAASLAEAGIFSSSLPLLAIEPLPET-PEQRALLLEL---DRYCA-VIVVSKPAARLGLELLDRYWPQPPQQ 84 (255)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEcCcEEEeeCCCC-HHHHHHHhcC---CCCCE-EEEECHHHHHHHHHHHHhhCCCCcCC
Confidence 567788999999999999887752 1111 1233444432 34673 33344 345667777766665443
Q ss_pred cEEEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911 83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAIT 116 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~ 116 (280)
.+..||+.... +.++.|+.+.+++...+.+.+
T Consensus 85 ~~~aVG~~Ta~--al~~~G~~~~~~p~~~~se~L 116 (255)
T PRK05752 85 PWFSVGAATAA--ILQDYGLDVSYPEQGDDSEAL 116 (255)
T ss_pred EEEEECHHHHH--HHHHcCCCcccCCCCCCcHHH
Confidence 67788886654 334568877666555544444
No 380
>PRK08811 uroporphyrinogen-III synthase; Validated
Probab=93.30 E-value=0.64 Score=40.26 Aligned_cols=223 Identities=10% Similarity=-0.030 Sum_probs=116.1
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCC----CchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCccEEE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRT----SEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYKDMVF 86 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~----~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~~~l~ 86 (280)
++.+...++.+.|++.|.....+.-- .........++.+. -||. .|+.| .-+..|....+......-.+..
T Consensus 25 Rp~~q~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~l~---~~d~-iiftS~NAV~~~~~~~~~~~~~~~~~~A 100 (266)
T PRK08811 25 RPSGEHAPLRRAVARHGGRLLALSPWRLQRLDTAQARDALRQAL---AAPI-VVFTSPAAVRAAHRLLPLQRPARAHWLS 100 (266)
T ss_pred CCHHHHHHHHHHHHHCCCcEEEcCceeecCCCchhHHHHHhhcc---cCCE-EEEECHHHHHHHHHHhcccCccCCeEEE
Confidence 55667789999999999888777542 11011222333322 4663 33344 3444444333222233345677
Q ss_pred EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911 87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY 166 (280)
Q Consensus 87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (280)
||+.... ++++.|+..++++...+.+.+.... .... -.+++ . -++-
T Consensus 101 VG~~TA~--aL~~~G~~~~~~P~~~~se~Ll~l~-~~~~-------~g~~v-------------------L-----i~rg 146 (266)
T PRK08811 101 VGEGTAR--ALQACGIDEVVRPTRMDSEGLLALP-LAQA-------PLQAV-------------------G-----LITA 146 (266)
T ss_pred ECHHHHH--HHHHcCCCceeCCCCCCcHHHHhCh-hhhC-------CCCEE-------------------E-----EEeC
Confidence 8886653 4456888888887655554443320 0000 00110 0 0111
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCC------CcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHc---CCCCCcE
Q psy8911 167 YRGVPEILRYLKENKCLVAAASRT------SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKAT---GIEYKDM 237 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T~~------~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~---~~~~~~~ 237 (280)
-.|-..+-+.|+++|+++--+.-- .........+.. ...+.+...++.-...|...+... .+..-.+
T Consensus 147 ~~gr~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~l~~~----~~~d~i~ftS~sav~~f~~~l~~~~~~~l~~~~~ 222 (266)
T PRK08811 147 PGGRGLLAPTLQQRGARILRADVYQRVPLRLRASTLAALSRA----APRSVLALSSAEALTLILQQLPDALRRALQQRPV 222 (266)
T ss_pred CCcHHHHHHHHHHCCCEEeEEEEEeeeCCCCCHHHHHHHHHh----CCCCEEEEChHHHHHHHHHHhhhhHHHHHhCCCE
Confidence 122334446677777655333211 011111111122 122322222222234454443221 1344457
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHh
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWAS 278 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ 278 (280)
+.||....+ .++++|+..+.|..+.+.+.|-.++.++++
T Consensus 223 v~is~rtA~--~a~~~G~~~v~vA~~~~~~~l~~a~~~~~~ 261 (266)
T PRK08811 223 VASSDRLLD--AAHAAGFIHVMRAAGPLPAQLAAAAAAIMT 261 (266)
T ss_pred EEeCHHHHH--HHHHcCCCceeeCCCCCHHHHHHHHHhhcC
Confidence 888887776 889999999999999999999999998764
No 381
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.24 E-value=0.36 Score=45.10 Aligned_cols=82 Identities=11% Similarity=0.112 Sum_probs=64.5
Q ss_pred cCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcC
Q psy8911 166 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEER 245 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~ 245 (280)
..||++|-..+|++.|++...+|+- .+-.+..+.++-|+++|.-. .+|+-=..+.++.+-.-.=+-|.||..+
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGD-N~~TAa~IA~EAGVDdfiAe------atPEdK~~~I~~eQ~~grlVAMtGDGTN 520 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGD-NPLTAAAIAAEAGVDDFIAE------ATPEDKLALIRQEQAEGRLVAMTGDGTN 520 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCC-CHHHHHHHHHHhCchhhhhc------CChHHHHHHHHHHHhcCcEEEEcCCCCC
Confidence 5699999999999999999999999 88899999999999998763 4454434444555556566779999999
Q ss_pred CcccccccC
Q psy8911 246 NSHDVSPLG 254 (280)
Q Consensus 246 di~~a~~aG 254 (280)
|--+-.+|.
T Consensus 521 DAPALAqAd 529 (681)
T COG2216 521 DAPALAQAD 529 (681)
T ss_pred cchhhhhcc
Confidence 955554443
No 382
>PLN02887 hydrolase family protein
Probab=93.13 E-value=0.069 Score=51.32 Aligned_cols=45 Identities=13% Similarity=0.237 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g 263 (280)
.|...+..+++.+|+++++++.|||+.||++.-+.+|.. +++.++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA 551 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNG 551 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCC
Confidence 677889999999999999999999999999999999975 555544
No 383
>KOG3107|consensus
Probab=93.01 E-value=0.21 Score=44.67 Aligned_cols=93 Identities=18% Similarity=0.265 Sum_probs=68.2
Q ss_pred CcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911 181 KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 257 (280)
Q Consensus 181 g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~ 257 (280)
+..=+++|+. ..-.+-..+=-.||...|-.-.+++. .|..-|+.|.+|+|- .-.-+.|||....-++||+..|++
T Consensus 370 ncvnVlvTtt-qLipalaKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf 447 (468)
T KOG3107|consen 370 NCVNVLVTTT-QLIPALAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF 447 (468)
T ss_pred ceeEEEEecc-chhHHHHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence 3445677777 54433333334677777764445554 344559999999998 566778999998889999999999
Q ss_pred EEECCCCCHHHHHHHHHH
Q psy8911 258 IHVKKGMSHAVLQKGLKQ 275 (280)
Q Consensus 258 i~v~~g~~~~~~~~~~~~ 275 (280)
.-+....+...+..+|+.
T Consensus 448 wrI~~h~Dl~~l~~aL~~ 465 (468)
T KOG3107|consen 448 WRISSHSDLDALYSALEL 465 (468)
T ss_pred EeeccCccHHHHhhhccc
Confidence 999988888888877754
No 384
>KOG2469|consensus
Probab=92.93 E-value=0.29 Score=44.26 Aligned_cols=96 Identities=14% Similarity=0.219 Sum_probs=71.2
Q ss_pred cCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---CccccccccceecCCCh-----------------------
Q psy8911 14 YPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIFPGQKT----------------------- 67 (280)
Q Consensus 14 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~~~~~~----------------------- 67 (280)
.+-...+|..+++.|.++.++||+.. .........+ ++..|||.+.+.+ .++
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~-~ytd~~mt~~~~~dW~~yfd~v~~~a-~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDW-DYTDIFMAFHYGFDWETYFDLVETRA-AKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred cCccccchHHHHhhccceEEeecccc-chhhHHHHHHhCCCcceeEEEEEEec-cCCccccccceeeeeccccccccccc
Confidence 33344599999999999999999998 7777766654 6888998432221 110
Q ss_pred -------------hHHHHHHHHhCCCCccEEEEeCCccc--ccccccCCCeEEEEcCCC
Q psy8911 68 -------------THFANLKKATGIEYKDMVFFDDEERN--SHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 68 -------------~~~~~~~~~~g~~p~~~l~v~D~~~~--i~aa~~~G~~~i~v~~~~ 111 (280)
+.-+.+++.++..-.+++++||+.++ +..-+.-|+.+++|.+..
T Consensus 278 ~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL 336 (424)
T KOG2469|consen 278 NTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL 336 (424)
T ss_pred cCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence 11677888899988999999999774 556677999999986544
No 385
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.75 E-value=0.12 Score=44.15 Aligned_cols=40 Identities=10% Similarity=0.034 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCCccEEEEeCCcccccccccC-------CCeEEEEc
Q psy8911 69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCILVE 108 (280)
Q Consensus 69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~-------G~~~i~v~ 108 (280)
..+.++++++.++.+++||||+.+|+.+++.+ |..++.+.
T Consensus 171 a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 171 IVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 49999999999999999999999999999888 66777774
No 386
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.72 E-value=0.37 Score=49.16 Aligned_cols=96 Identities=9% Similarity=0.052 Sum_probs=68.9
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChh----------------------
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTT---------------------- 68 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~---------------------- 68 (280)
=+|.+++.+.++.|+++|+++.++|.-+. ..+..+-+..|+..--+...++.+....
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~-~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHV-ETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCH-HHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 37899999999999999999999999999 9999999999965332100133332111
Q ss_pred -H---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 69 -H---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 69 -~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
+ .-+++++. =.-+.|.||..+|+-|-++|-+-......|
T Consensus 625 ~qK~~IV~~lq~~---g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 625 EQKARIVEALQKS---GHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred HHHHHHHHHHHhC---CCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 1 22333333 467899999999999999988776544333
No 387
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=92.58 E-value=0.25 Score=49.52 Aligned_cols=63 Identities=19% Similarity=0.017 Sum_probs=46.0
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
.++.+|+||||.+..... .......+-|++.++|+.|.+. +..++|+|+. ..+.++..+...+
T Consensus 508 rll~LDyDGTL~~~~~~~--------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~~~~~~ 571 (797)
T PLN03063 508 RLLILGFYGTLTEPRNSQ--------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRS-GKDILDKNFGEYN 571 (797)
T ss_pred eEEEEecCccccCCCCCc--------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCC-CHHHHHHHhCCCC
Confidence 367899999998532110 0112355778999999999765 6789999999 8888888887644
No 388
>KOG3107|consensus
Probab=92.45 E-value=0.36 Score=43.23 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=64.4
Q ss_pred EEecCC-CchHHHHHHHhhcCccccccccceecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911 32 AAASRT-SEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 32 ~i~Sn~-~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
.++|+. -.|..++.+| +||...|.+.-|++..|+++ |+++.+++|- .-..++|||....-.+|++..|..+-+
T Consensus 374 VlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI 450 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRI 450 (468)
T ss_pred EEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEee
Confidence 445544 4433344444 46667787668999988887 9999999998 566788999988899999999999999
Q ss_pred cCCCchhhhhccc
Q psy8911 108 EDGMTNAITLYGR 120 (280)
Q Consensus 108 ~~~~~~~~~~~~~ 120 (280)
..+.+...+.+++
T Consensus 451 ~~h~Dl~~l~~aL 463 (468)
T KOG3107|consen 451 SSHSDLDALYSAL 463 (468)
T ss_pred ccCccHHHHhhhc
Confidence 7777666655443
No 389
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=92.41 E-value=0.68 Score=39.10 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=62.3
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHH----HHHHHhhcCccccccccceecCC---ChhHHHHHHHHhCCCCc
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG----AQQLLDLFNWNQYFDHKQIFPGQ---KTTHFANLKKATGIEYK 82 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~----~~~~l~~~~l~~~fd~~~i~~~~---~~~~~~~~~~~~g~~p~ 82 (280)
..++.||+.|+++..-++|..|.-+||... +. ...-|..+|+...-+.+.++-.. +...++.+.+ ..+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~-~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~ 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQ-ENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYK 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccch-hcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccc
Confidence 467899999999999999999999999887 43 23345666776655533333322 2333666666 556
Q ss_pred cEEEEeCCcccccccccCCCe
Q psy8911 83 DMVFFDDEERNSHDVSPLGVT 103 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~~~G~~ 103 (280)
=+++|||...|.......+..
T Consensus 195 iVm~vGDNl~DF~d~~~k~~~ 215 (274)
T COG2503 195 IVMLVGDNLDDFGDNAYKKAE 215 (274)
T ss_pred eeeEecCchhhhcchhhhhhh
Confidence 689999999887665554443
No 390
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=92.35 E-value=0.63 Score=39.77 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=34.8
Q ss_pred ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
|-...+.+++++++++++++++|||.+|+..- ..+.++|.|.+.
T Consensus 166 K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 166 KGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 44459999999999999999999999998776 778889988553
No 391
>PLN02382 probable sucrose-phosphatase
Probab=92.22 E-value=0.46 Score=43.88 Aligned_cols=45 Identities=20% Similarity=0.182 Sum_probs=38.3
Q ss_pred ChhHHHHHHHHh---CCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911 66 KTTHFANLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 66 ~~~~~~~~~~~~---g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
|-...+.+++.+ |+++++++.|||+.+|++.-+.+|...|.+.+.
T Consensus 176 Kg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred HHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 333488899998 999999999999999999999999877777554
No 392
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=92.13 E-value=0.81 Score=36.23 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=31.5
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHH---HHHhh
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ---QLLDL 49 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~---~~l~~ 49 (280)
...|++.++++.|+++|+++.++|..+. ..+. .+++.
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~-~~~~~t~~~l~~ 66 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPI-GQADRTRSYLSQ 66 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcH-HHHHHHHHHHHH
Confidence 4579999999999999999999999998 6553 56666
No 393
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=91.98 E-value=0.79 Score=38.37 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=33.2
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW 52 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l 52 (280)
.++-||+.+.++.|.++ ++-.|+|.+.. .++++.....|+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~-qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYT-QYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHH-HHHHHHHHhcCC
Confidence 67899999999999987 67778888888 778887777765
No 394
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=91.96 E-value=1.4 Score=38.77 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=66.1
Q ss_pred eEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHH---HHHhh
Q psy8911 128 HLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAK---QILNL 202 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~---~~l~~ 202 (280)
.++-|+|.|+.-++..+.. .- .+..-.+...-.++||+..+.+.|.+.| .++.-+||+ +-..-. +.+..
T Consensus 163 giISDiDDTV~~T~V~~~~r~~-----~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnS-Pw~~f~~L~efi~~ 236 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRKA-----GRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNS-PWQLFPTLQEFITN 236 (373)
T ss_pred eeeeccccceEecccccchHHH-----HHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCC-hhHhHHHHHHHHhc
Confidence 4688999999765544321 00 0011123334578999999999999998 899999998 443322 22222
Q ss_pred CCCc----------cccccceEec-CCCHHHHHHHHHHcCCCCCcEEEEeCCcC-Cc
Q psy8911 203 INLN----------QYFSNKEIYP-GPKTTHFESLKKATGIEYKDMVFFDDEER-NS 247 (280)
Q Consensus 203 ~gl~----------~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di 247 (280)
-++. ..|+.+...+ ..|...++.++.++ +-...+.|||+=. |.
T Consensus 237 ~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~--p~~kfvLVGDsGE~Dp 291 (373)
T COG4850 237 RNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRY--PDRKFVLVGDSGEHDP 291 (373)
T ss_pred CCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhC--CCceEEEecCCCCcCH
Confidence 2221 1233322112 24556677677774 4568889988744 53
No 395
>KOG2469|consensus
Probab=91.87 E-value=0.56 Score=42.42 Aligned_cols=98 Identities=11% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccceEec-CC------------------------
Q psy8911 167 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYP-GP------------------------ 218 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~~~~~-~~------------------------ 218 (280)
.+.....|..+++.|.++.++||+ .-.++...+.++ +...||+.+++.. +|
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns-~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNS-DWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred cCccccchHHHHhhccceEEeecc-ccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeecccccccccccc
Confidence 344444889999999999999999 777777666653 5678888765442 11
Q ss_pred ----------CHHHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEECCCCC
Q psy8911 219 ----------KTTHFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKKGMS 265 (280)
Q Consensus 219 ----------k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~~g~~ 265 (280)
.......+++.++..-.++++|||... ||.-.+ .-|+.+++|-....
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~ 337 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELE 337 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhh
Confidence 113367778888888899999999998 454444 47999999865443
No 396
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=91.80 E-value=0.75 Score=47.77 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=36.7
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
++.+|+.++++.|++.|+++.++|+- ..+.+..+.+..|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD-~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGD-KVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCC-cHHHHHHHHHHhCCC
Confidence 67899999999999999999999998 888888887777764
No 397
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=91.71 E-value=0.38 Score=48.73 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=47.1
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINL 205 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl 205 (280)
.++.+|+||||.+....-... ...+ ....+.+.|++.++|+.|.+. +..++|+|+. ..+.++..+...++
T Consensus 592 RLlfLDyDGTLap~~~~P~~~-----~~~~---~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR-~~~~Le~~fg~~~L 662 (934)
T PLN03064 592 RLLILGFNATLTEPVDTPGRR-----GDQI---KEMELRLHPELKEPLRALCSDPKTTIVVLSGS-DRSVLDENFGEFDM 662 (934)
T ss_pred eEEEEecCceeccCCCCcccc-----cccc---cccccCCCHHHHHHHHHHHhCCCCeEEEEeCC-CHHHHHHHhCCCCc
Confidence 477899999998743221000 0000 001345668899999999764 6789999999 88888888877544
No 398
>KOG0202|consensus
Probab=91.63 E-value=0.81 Score=45.22 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-------------------------eEecCCC
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------------------------EIYPGPK 219 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-------------------------~~~~~~k 219 (280)
+|.|++++.++.++..|+++.++|+- ..+.+..+.+.+|+...=+.+ .++....
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD-~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGD-NKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 67899999999999999999999999 999999999999986433210 1122233
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911 220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 256 (280)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~ 256 (280)
|.+=.++.+.++-.-+=+-|-||..+|--+-|.|.+-
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 4444555555555556777999999998777776543
No 399
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=91.53 E-value=0.19 Score=42.08 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=33.0
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
.+.+++.+|+++++++.|||+.+|+..-+.+|...+
T Consensus 191 i~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~a 226 (254)
T PF08282_consen 191 IKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVA 226 (254)
T ss_dssp HHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred HHHHhhhcccccceeEEeecccccHhHHhhcCeEEE
Confidence 888899999999999999999999999999987644
No 400
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=91.03 E-value=0.53 Score=41.16 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=30.3
Q ss_pred CCCcceecCCHHHHHHHHHHCC-ceEEEecCCCc
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNN-CLVAAASRTSE 39 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~ 39 (280)
...+..+||.+.++++.+|+.| ++++++||+..
T Consensus 87 ~~GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl 120 (296)
T COG0731 87 LSGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL 120 (296)
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEeCCCh
Confidence 3456789999999999999999 79999999999
No 401
>KOG0202|consensus
Probab=90.51 E-value=1.5 Score=43.44 Aligned_cols=93 Identities=10% Similarity=0.079 Sum_probs=68.4
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc--ceecC-----------------------CC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK--QIFPG-----------------------QK 66 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~--~i~~~-----------------------~~ 66 (280)
+|.|++.+.++.+++.|+++.++|.-.. ..++.+-++.|+...=+.+ ..+++ ..
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~-~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNK-ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 7899999999999999999999999999 9999999999974332210 11122 12
Q ss_pred hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911 67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 105 (280)
Q Consensus 67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i 105 (280)
+.+=.++.+.++-.-+=+.|-||..+|.-|-+.|.+-..
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIA 701 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIA 701 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhccccee
Confidence 222345555566666778999999999888877766544
No 402
>KOG3189|consensus
Probab=90.16 E-value=0.94 Score=37.11 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=41.1
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC--C
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN--L 205 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g--l 205 (280)
++.||.||||.+. .....|.+.+.|+.|++. +.++++-++ ..+ +..+++| +
T Consensus 13 l~lfdvdgtLt~~----------------------r~~~~~e~~~~l~~lr~~-v~ig~Vggs-Dl~---k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTPP----------------------RQKVTPEMLEFLQKLRKK-VTIGFVGGS-DLS---KQQEQLGDNV 65 (252)
T ss_pred EEEEecCCccccc----------------------cccCCHHHHHHHHHHhhh-eEEEEeecH-HHH---HHHHHhchhH
Confidence 6789999999742 234668999999999888 889999888 443 3444543 3
Q ss_pred cccccc
Q psy8911 206 NQYFSN 211 (280)
Q Consensus 206 ~~~f~~ 211 (280)
.+-||+
T Consensus 66 l~~fDY 71 (252)
T KOG3189|consen 66 LEEFDY 71 (252)
T ss_pred Hhhhcc
Confidence 455664
No 403
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=88.72 E-value=1.1 Score=37.63 Aligned_cols=224 Identities=16% Similarity=0.158 Sum_probs=111.3
Q ss_pred cCCHHHHHHHHHHCCceEEEecCC---CchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHh---CCCCccEEE
Q psy8911 14 YPDVPGILKYLKQNNCLVAAASRT---SEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKAT---GIEYKDMVF 86 (280)
Q Consensus 14 ~~g~~~~l~~L~~~g~~~~i~Sn~---~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~---g~~p~~~l~ 86 (280)
-+...++.+.|+++|..+..+.-- +.+.... ...... ..-+|. .++.| .-+..|...++.. ......++.
T Consensus 10 ~~~~~~l~~~l~~~G~~v~~~p~~~~~~~~~~~~-~~~~~~-~~~~d~-iiftS~~av~~~~~~~~~~~~~~~~~~~~~a 86 (249)
T PRK05928 10 SPKAEELVELLRELGFVALHFPLIEIEPGRQLPQ-LAAQLA-ALGADW-VIFTSKNAVEFLLSALKKKKLKWPKNKKYAA 86 (249)
T ss_pred HHHHHHHHHHHHHcCCCEEEeccEEEecCCCcCh-HHHHhh-CCCCCE-EEEECHHHHHHHHHHHHhcCcCCCCCCEEEE
Confidence 345567888999999877654211 1100011 111122 233673 23333 3455565555521 234456777
Q ss_pred EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911 87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY 166 (280)
Q Consensus 87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (280)
||..... ++++.|..+.+++...+.+++....... .+.| ..+. -...
T Consensus 87 vG~~Ta~--~l~~~G~~~~~~~~~~~~~~l~~~l~~~--------~~~~------------------~~il-----i~~~ 133 (249)
T PRK05928 87 IGEKTAL--ALKKLGGKVVFVPEDGESSELLLELPEL--------LLKG------------------KRVL-----YLRG 133 (249)
T ss_pred ECHHHHH--HHHHcCCCccccCCCCcChHHHHhChhh--------hcCC------------------CEEE-----EECC
Confidence 7776543 4456788877775443333332211110 0010 0000 0112
Q ss_pred CCCHHHHHHHHhhCCcEEEEEc---CCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcC----CCCCcEEE
Q psy8911 167 YRGVPEILRYLKENKCLVAAAS---RTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATG----IEYKDMVF 239 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~~~i~T---~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~----~~~~~~l~ 239 (280)
-.+...+.+.|++.|..+..+. ...........++.+. ...+|.+...+..-.+.|...+...+ +..-.++.
T Consensus 134 ~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~-~~~~d~ivftS~~~v~~~~~~~~~~~~~~~~~~~~~~a 212 (249)
T PRK05928 134 NGGREVLGDTLEERGAEVDECEVYERVPPKLDGAELLARLQ-SGEVDAVIFTSPSTVRAFFSLAPELGRREWLLSCKAVV 212 (249)
T ss_pred CCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCChHHHHHHHH-hCCCCEEEECCHHHHHHHHHHhcccchhHHHhCCeEEE
Confidence 2345566677888775543321 1101101111111111 22445443333333455555554443 22445778
Q ss_pred EeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHH
Q psy8911 240 FDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQW 276 (280)
Q Consensus 240 igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~ 276 (280)
||....+ .+++.|...+.++...+...+.+++..|
T Consensus 213 iG~~Ta~--~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 247 (249)
T PRK05928 213 IGERTAE--ALRELGIKVIIVPDSADNEALLRALKEL 247 (249)
T ss_pred eCHHHHH--HHHHcCCCcceecCCCChHHHHHHHHHh
Confidence 8888877 7788999988898877888887777765
No 404
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=88.72 E-value=0.7 Score=39.48 Aligned_cols=88 Identities=18% Similarity=0.233 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHC------CceEEEecCCCchHHHHHHHhhc-CccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 16 DVPGILKYLKQN------NCLVAAASRTSEIQGAQQLLDLF-NWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 16 g~~~~l~~L~~~------g~~~~i~Sn~~~~~~~~~~l~~~-~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
.....|.+|+++ -++++|+|..+.|.+ +++++.+ .|.=..|.....++-+.+.++.+.+. =+|||
T Consensus 168 ~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah-~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~p-------hIFFD 239 (264)
T PF06189_consen 168 DFLKKLSKLQKKFPPENSPIRTALVTARSAPAH-ERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFRP-------HIFFD 239 (264)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEEEEcCCCchh-HHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhCC-------CEeec
Confidence 455556666654 478999998877544 6666655 34445663334456566666665543 38999
Q ss_pred CCcccccccccCCCeEEEEcCCCc
Q psy8911 89 DEERNSHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~~~~ 112 (280)
|...+++.|. .+..+.+|+++..
T Consensus 240 DQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 240 DQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred CchhhhhHhh-cCCCEEeccCCcC
Confidence 9999999999 8999999988753
No 405
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=88.72 E-value=1.4 Score=45.68 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=38.0
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN 53 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~ 53 (280)
++.|++.+.++.|+++|+++.++|..+. ..+..+-+..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~-~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNP-LTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence 5899999999999999999999999999 8899988888883
No 406
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=88.27 E-value=1.4 Score=38.54 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=31.3
Q ss_pred eeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCC
Q psy8911 163 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLIN 204 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~g 204 (280)
+-.+||...++++.+|+.| ++++|+||+ .. ..+++.+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNg-sl---pdv~~~L~ 128 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNG-SL---PDVLEELK 128 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCC-Ch---HHHHHHhc
Confidence 4579999999999999999 799999999 66 34455554
No 407
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=87.68 E-value=13 Score=30.81 Aligned_cols=215 Identities=9% Similarity=0.031 Sum_probs=108.9
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCch----HHHHHHHhhcCccccccccceecCCChhHHHHHHHHhC---CCCccEE
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEI----QGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATG---IEYKDMV 85 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g---~~p~~~l 85 (280)
+-++..++.+.|+++|+.+..+.--... ......+..+. .+|.+.+.++.-+..|...+...+ .....++
T Consensus 6 ~~~~~~~l~~~L~~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~iiftS~~av~~~~~~~~~~~~~~~~~~~~~ 82 (239)
T cd06578 6 PRPQADELAALLEALGAEVLELPLIEIEPLDDAELDAALADLD---EYDWLIFTSPNAVEAFFEALEELGLRALAGLKIA 82 (239)
T ss_pred chHHhHHHHHHHHHcCCcEEEeeeEEEecCChHHHHHHHHhcC---CCCEEEEECHHHHHHHHHHHHhhCCccccCCEEE
Confidence 3445678999999999887555322220 12233333332 577433334444555666666543 4455677
Q ss_pred EEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec
Q psy8911 86 FFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK 165 (280)
Q Consensus 86 ~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (280)
.||....+ ++++.|+..+.++...+.+.+.+..... +..|. .+ +.
T Consensus 83 avG~~Ta~--~l~~~g~~~~~~~~~~~~~~L~~~i~~~--------~~~~~------------------~i-------l~ 127 (239)
T cd06578 83 AVGPKTAE--ALREAGLTADFVPEEGDSEGLLELLELQ--------DGKGK------------------RI-------LR 127 (239)
T ss_pred EECHHHHH--HHHHcCCCceeCCCccCHHHHHHHHHhc--------CCCCC------------------EE-------EE
Confidence 77776553 5667898888875555544443321110 11000 00 01
Q ss_pred cCC--CHHHHHHHHhhCCcEEEEE---cCCCcH--HHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHc---CCCCC
Q psy8911 166 YYR--GVPEILRYLKENKCLVAAA---SRTSEI--LHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKAT---GIEYK 235 (280)
Q Consensus 166 ~~~--g~~~~L~~L~~~g~~~~i~---T~~~~~--~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~---~~~~~ 235 (280)
+-. +-..+.+.|++.|..+.-+ +..... ......++.. ..+.+.+.+......|...+.+. .+..-
T Consensus 128 ~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~----~~~~iiftS~~~v~~f~~~~~~~~~~~~~~~ 203 (239)
T cd06578 128 PRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEG----AIDAVLFTSPSTVRNLLELLGKEGRALLKNV 203 (239)
T ss_pred EcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcC----CCcEEEEeCHHHHHHHHHHHhhhhhhhhcCC
Confidence 111 1245556677777443222 222011 1112223222 12222222223345555555442 35556
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK 271 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~ 271 (280)
.++.||....+ .+++.|++.+.+....+...+-.
T Consensus 204 ~~~aig~~t~~--~l~~~g~~~~~~~~~~~~~~l~~ 237 (239)
T cd06578 204 KIAAIGPRTAE--ALRELGLKVVIVAESPTLEALLE 237 (239)
T ss_pred eEEEECHHHHH--HHHHcCCCceeeecCCChHHHHh
Confidence 77888888776 66678988888877765555543
No 408
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.08 E-value=2.8 Score=38.78 Aligned_cols=97 Identities=13% Similarity=0.051 Sum_probs=70.0
Q ss_pred eccCCCH--HHHHHHHhhCCcEEEEEcCCCcHH-HHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911 164 IKYYRGV--PEILRYLKENKCLVAAASRTSEIL-HAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 164 ~~~~~g~--~~~L~~L~~~g~~~~i~T~~~~~~-~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~ 235 (280)
..+||.. .++.+.+.+.|.++.++|.-.-+. ..+..|...|.+-+=-.+-.+ .+.....|..+++.-+++|.
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~ 175 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPK 175 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChh
Confidence 3456644 567799999999999999873333 456777777765322211111 12334668999999999999
Q ss_pred cEEEEeCCcC-CcccccccCceEEEE
Q psy8911 236 DMVFFDDEER-NSHDVSPLGVTCIHV 260 (280)
Q Consensus 236 ~~l~igD~~~-di~~a~~aG~~~i~v 260 (280)
..+.+||..+ |...++++|+.|.+.
T Consensus 176 ~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 176 KWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred heEEecCchhhhhcCccccchhHHHH
Confidence 9999999988 889999999987653
No 409
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=86.45 E-value=2.9 Score=43.56 Aligned_cols=41 Identities=15% Similarity=0.077 Sum_probs=35.5
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN 53 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~ 53 (280)
+|.||+.+.++.|+++|+++.++|.-.. +.+..+-+..++.
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCCC
Confidence 6789999999999999999999999888 7888776666653
No 410
>KOG0323|consensus
Probab=85.98 E-value=2.4 Score=41.00 Aligned_cols=80 Identities=20% Similarity=0.140 Sum_probs=56.5
Q ss_pred ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEecCCCHHHHHHHHHHcCCC---CCcE
Q psy8911 162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYPGPKTTHFESLKKATGIE---YKDM 237 (280)
Q Consensus 162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~k~~~~~~~~~~~~~~---~~~~ 237 (280)
..+++.|++.++|+++.+. +.|.|.|-+ .+.++..+++-+.=. .||...++..+..+ +.+...-..+. +..+
T Consensus 198 ~~vKlRP~~~efL~~~skl-femhVyTmg-~R~YA~~i~~liDP~~~lF~dRIisrde~~--~~kt~dL~~~~p~g~smv 273 (635)
T KOG0323|consen 198 YLVKLRPFVHEFLKEANKL-FEMHVYTMG-TRDYALEIAKLIDPEGKYFGDRIISRDESP--FFKTLDLVLLFPCGDSMV 273 (635)
T ss_pred EEEEeCccHHHHHHHHHhh-ceeEEEecc-chHHHHHHHHHhCCCCccccceEEEecCCC--cccccccccCCCCCCccE
Confidence 4578999999999999988 999999999 999999999988654 67875444333322 22222222333 3337
Q ss_pred EEEeCCcC
Q psy8911 238 VFFDDEER 245 (280)
Q Consensus 238 l~igD~~~ 245 (280)
+.|+|+..
T Consensus 274 vIIDDr~d 281 (635)
T KOG0323|consen 274 VIIDDRSD 281 (635)
T ss_pred EEEeCccc
Confidence 77777765
No 411
>KOG0323|consensus
Probab=85.14 E-value=1.9 Score=41.68 Aligned_cols=87 Identities=17% Similarity=0.138 Sum_probs=62.5
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc-cccccccceecCCChhHHHHHHHHhCCCC---ccE
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW-NQYFDHKQIFPGQKTTHFANLKKATGIEY---KDM 84 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l-~~~fd~~~i~~~~~~~~~~~~~~~~g~~p---~~~ 84 (280)
..+++.|++.++|+.+.+. |.+.|.|=+.+ ..+..+.+.+.- ..||.+ .|++-++ ..+.....-....| +.+
T Consensus 198 ~~vKlRP~~~efL~~~skl-femhVyTmg~R-~YA~~i~~liDP~~~lF~d-RIisrde-~~~~kt~dL~~~~p~g~smv 273 (635)
T KOG0323|consen 198 YLVKLRPFVHEFLKEANKL-FEMHVYTMGTR-DYALEIAKLIDPEGKYFGD-RIISRDE-SPFFKTLDLVLLFPCGDSMV 273 (635)
T ss_pred EEEEeCccHHHHHHHHHhh-ceeEEEeccch-HHHHHHHHHhCCCCccccc-eEEEecC-CCcccccccccCCCCCCccE
Confidence 4579999999999999977 99999999999 999999998854 467873 5555444 33333333333444 448
Q ss_pred EEEeCCccccccccc
Q psy8911 85 VFFDDEERNSHDVSP 99 (280)
Q Consensus 85 l~v~D~~~~i~aa~~ 99 (280)
++|||+..-..-+..
T Consensus 274 vIIDDr~dVW~~~~~ 288 (635)
T KOG0323|consen 274 VIIDDRSDVWPDHKR 288 (635)
T ss_pred EEEeCccccccCCCc
Confidence 999998655555554
No 412
>PLN02423 phosphomannomutase
Probab=84.93 E-value=1.2 Score=38.04 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEECCC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKKG 263 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~~g 263 (280)
.|...+..++ ++++++.||| ..||++.-+.-|+.++.|+..
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 4445555555 9999999999 799999999899999999743
No 413
>KOG3128|consensus
Probab=84.82 E-value=2.3 Score=36.26 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=57.4
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-CCcc-------ccccc--e--E-ecCC------CH-HH
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-NLNQ-------YFSNK--E--I-YPGP------KT-TH 222 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-gl~~-------~f~~~--~--~-~~~~------k~-~~ 222 (280)
.+.+..|+.++...|+++++|+.|.|.+ -...++..+++- ++.. |.++- . + +.+| |. ..
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAG-igdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v 214 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAG-IGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV 214 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecc-hHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence 3567789999999999999999999999 777666665543 3332 11110 0 1 1111 11 11
Q ss_pred HHHHHHHcC--CCCCcEEEEeCCcCCccccccc
Q psy8911 223 FESLKKATG--IEYKDMVFFDDEERNSHDVSPL 253 (280)
Q Consensus 223 ~~~~~~~~~--~~~~~~l~igD~~~di~~a~~a 253 (280)
++...+.+. -...++++.||+..|+..|..+
T Consensus 215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 333344443 3567888999999998877763
No 414
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=83.77 E-value=4.8 Score=35.61 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=60.0
Q ss_pred CcceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcC-----c--------cccccccceecCC---ChhHHH
Q psy8911 9 AHIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFN-----W--------NQYFDHKQIFPGQ---KTTHFA 71 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~-----l--------~~~fd~~~i~~~~---~~~~~~ 71 (280)
..-+++|||-.+.+.|.+.| .++.-+||++- .....+-+.+. . ...|| .++.+. |....+
T Consensus 193 ~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw-~~f~~L~efi~~~~~P~GPl~L~~~g~~~~--~i~~sga~rK~~~l~ 269 (373)
T COG4850 193 LTRQVIPGVSAWYRALTNLGDAPVFYVSNSPW-QLFPTLQEFITNRNFPYGPLLLRRWGGVLD--NIIESGAARKGQSLR 269 (373)
T ss_pred cccCCCCCHHHHHHHHHhcCCCCeEEecCChh-HhHHHHHHHHhcCCCCCCchhHhhcCCccc--ccccchhhhcccHHH
Confidence 34578999999999999999 99999999998 55544333322 1 12344 333332 222255
Q ss_pred HHHHHhCCCCccEEEEeCC-cccccc----ccc--CCCeEEEEcC
Q psy8911 72 NLKKATGIEYKDMVFFDDE-ERNSHD----VSP--LGVTCILVED 109 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~-~~~i~a----a~~--~G~~~i~v~~ 109 (280)
.+++++ +-...+.|||+ +.|.+. ++. -.+-.|++++
T Consensus 270 nil~~~--p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRd 312 (373)
T COG4850 270 NILRRY--PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRD 312 (373)
T ss_pred HHHHhC--CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeee
Confidence 566654 45679999998 667332 222 3445566544
No 415
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=83.25 E-value=31 Score=30.17 Aligned_cols=97 Identities=11% Similarity=-0.005 Sum_probs=55.7
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
....++++.|+++.-.+ .+.|.......++--....|..-.|.+.+.++ ++...+.+++++.+. ++.+|+ +.
T Consensus 170 ~~~~~iv~~l~~~~~~~-~v~~TIC~aT~~RQ~a~~~La~~vD~miVVGg~~SsNT~rL~eia~~~~~---~t~~Ie-~~ 244 (281)
T PRK12360 170 ELWEDILNVIKLKSKEL-VFFNTICSATKKRQESAKELSKEVDVMIVIGGKHSSNTQKLVKICEKNCP---NTFHIE-TA 244 (281)
T ss_pred HHHHHHHHHHHHhCccc-ccCCCcchhhhhHHHHHHHHHHhCCEEEEecCCCCccHHHHHHHHHHHCC---CEEEEC-Ch
Confidence 45566677777664333 33444333333322223334555665433333 456778888888763 466664 45
Q ss_pred CCcccccccCceEEEECCCCCHHHH
Q psy8911 245 RNSHDVSPLGVTCIHVKKGMSHAVL 269 (280)
Q Consensus 245 ~di~~a~~aG~~~i~v~~g~~~~~~ 269 (280)
.|+..-.-.|..+|+++.|.+-+.|
T Consensus 245 ~el~~~~~~~~~~VGitaGASTP~~ 269 (281)
T PRK12360 245 DELDLEMLKDYKIIGITAGASTPDW 269 (281)
T ss_pred HHCCHHHhCCCCEEEEEccCCCCHH
Confidence 6666555578899999988865443
No 416
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=82.38 E-value=4.4 Score=30.80 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=26.3
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCc
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSE 39 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~ 39 (280)
.++.+++.+.|+.|+++|+.+.++|..+.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 45778999999999999999999998887
No 417
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=82.36 E-value=33 Score=29.93 Aligned_cols=91 Identities=16% Similarity=0.166 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHhhCCcE---------EEEEcCCCcHHHHHHHHhhCCCccccccceEec--CCCHHHHHHHHHHcCCCCC
Q psy8911 167 YRGVPEILRYLKENKCL---------VAAASRTSEILHAKQILNLINLNQYFSNKEIYP--GPKTTHFESLKKATGIEYK 235 (280)
Q Consensus 167 ~~g~~~~L~~L~~~g~~---------~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~--~~k~~~~~~~~~~~~~~~~ 235 (280)
.....++++.|+++ ++ ++-+|.. +.+.++.+.+. .+++- ++++ +++...+.+++++.|.
T Consensus 170 ~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~n-RQ~Avk~la~~---~Dl~i--VVG~~nSSNs~rL~eiA~~~g~--- 239 (294)
T COG0761 170 VDDTAEIVAALKER-FPKIEVPPFNDICYATQN-RQDAVKELAPE---VDLVI--VVGSKNSSNSNRLAEIAKRHGK--- 239 (294)
T ss_pred HHHHHHHHHHHHHh-CccccCCcccccchhhhh-HHHHHHHHhhc---CCEEE--EECCCCCccHHHHHHHHHHhCC---
Confidence 46788888888887 66 5555555 33333333322 23332 2332 2445678999999988
Q ss_pred cEEEEeCCcCCcccccccCceEEEECCCCCHHH
Q psy8911 236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAV 268 (280)
Q Consensus 236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~ 268 (280)
.+..| |++.+|....-.|..+|+|+.|.+-++
T Consensus 240 ~aylI-d~~~ei~~~w~~~~~~VGvTAGAStPd 271 (294)
T COG0761 240 PAYLI-DDAEEIDPEWLKGVKTVGVTAGASTPD 271 (294)
T ss_pred CeEEe-CChHhCCHHHhcCccEEEEecCCCCCH
Confidence 34444 567778877778899999999986444
No 418
>PLN03190 aminophospholipid translocase; Provisional
Probab=81.91 E-value=4.5 Score=42.54 Aligned_cols=36 Identities=25% Similarity=0.194 Sum_probs=30.9
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 201 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~ 201 (280)
++.+|+.++++.|+++|+++.++|+- ....+..+.+
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD-~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGD-KQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHH
Confidence 57899999999999999999999998 7776665544
No 419
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=81.47 E-value=3.3 Score=33.06 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=60.3
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE 90 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~ 90 (280)
.+-.++...|..|+++ -+++-+|+... +..+.--..+... -.||+..+++.... -.+.+...++ +|++|+
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~-dl~~iT~~~l~~q~ih~~~l~i~g~h~K---V~~vrth~id----lf~ed~ 142 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKA-DLTRITYAWLFIQNIHYDHLEIVGLHHK---VEAVRTHNID----LFFEDS 142 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhH-HHHHHHHHHHHHhccchhhhhhhccccc---chhhHhhccC----cccccc
Confidence 3455788888888887 57777777766 5555444443322 34665555544322 2445555554 789999
Q ss_pred ccc-ccccccCCCeEEEEcCCCc
Q psy8911 91 ERN-SHDVSPLGVTCILVEDGMT 112 (280)
Q Consensus 91 ~~~-i~aa~~~G~~~i~v~~~~~ 112 (280)
..+ ++.|+++|++++++.++..
T Consensus 143 ~~na~~iAk~~~~~vilins~yn 165 (194)
T COG5663 143 HDNAGQIAKNAGIPVILINSPYN 165 (194)
T ss_pred CchHHHHHHhcCCcEEEecCccc
Confidence 766 8889999999999976543
No 420
>KOG3128|consensus
Probab=81.15 E-value=3.3 Score=35.34 Aligned_cols=89 Identities=9% Similarity=-0.023 Sum_probs=58.6
Q ss_pred cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc----------ccceecCCChh--H--------
Q psy8911 10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD----------HKQIFPGQKTT--H-------- 69 (280)
Q Consensus 10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd----------~~~i~~~~~~~--~-------- 69 (280)
.+.+..|..++...|+++++|+.|.|.+-. +..+.+++......-+. .....++.... +
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGig-diiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v 214 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIG-DIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV 214 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchH-HHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence 467788999999999999999999999999 88888877654332222 01121211111 1
Q ss_pred HHHHHHHhC--CCCccEEEEeCCccccccccc
Q psy8911 70 FANLKKATG--IEYKDMVFFDDEERNSHDVSP 99 (280)
Q Consensus 70 ~~~~~~~~g--~~p~~~l~v~D~~~~i~aa~~ 99 (280)
.+...+.+. -.-.++++.|||.-|+..|--
T Consensus 215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred HHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 222233332 356789999999988766543
No 421
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=79.99 E-value=10 Score=32.24 Aligned_cols=97 Identities=9% Similarity=0.106 Sum_probs=57.9
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCC---CccEEE
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIE---YKDMVF 86 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~---p~~~l~ 86 (280)
+-+...++...|+++|.....+---.. .. .+..++.+. . +|.+.+.|..-+..|...+...+.+ -..+..
T Consensus 9 ~~~~~~~~~~~l~~~G~~~~~~P~i~~-~~~~~l~~~l~~l~--~-~d~vvfTS~~av~~~~~~l~~~~~~~~~~~~i~a 84 (248)
T COG1587 9 PREQAEELAALLRKAGAEPLELPLIEI-EPLPDLEVALEDLD--S-ADWVVFTSPNAVRFFFEALKEQGLDALKNKKIAA 84 (248)
T ss_pred chhhhHHHHHHHHhCCCcceeecceee-ecchhHHHHHhccc--c-CCEEEEECHHHHHHHHHHHHhhcccccccCeEEE
Confidence 335688999999999997666654433 22 344444443 3 7843333334455577777776653 345555
Q ss_pred EeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911 87 FDDEERNSHDVSPLGVTCILVEDGMTNAI 115 (280)
Q Consensus 87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~ 115 (280)
||=.. -++.++.|..+..++...+.+.
T Consensus 85 VG~~T--a~~l~~~G~~~~~~p~~~~~~~ 111 (248)
T COG1587 85 VGEKT--AEALRKLGIKVDFIPEDGDSEG 111 (248)
T ss_pred EcHHH--HHHHHHhCCCCCcCCCccchHH
Confidence 55433 3567778888888866444333
No 422
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=78.73 E-value=3 Score=37.16 Aligned_cols=36 Identities=8% Similarity=0.197 Sum_probs=30.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHH
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ 44 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~ 44 (280)
.+..++|.+.++++.++++|+.++|.||+..++.++
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~e~l~ 174 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRPDVLE 174 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCHHHHH
Confidence 455578999999999999999999999998744333
No 423
>PTZ00174 phosphomannomutase; Provisional
Probab=78.68 E-value=4.4 Score=34.48 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEEC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVK 261 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~ 261 (280)
.|...+..++++ +++++.||| +.+|++.-+.+|...+.|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 566778888888 699999999 8999999998888778886
No 424
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=76.62 E-value=50 Score=30.00 Aligned_cols=225 Identities=9% Similarity=0.049 Sum_probs=110.2
Q ss_pred CHHHHHHHHHHCCceEEEecC------CCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCC--------
Q psy8911 16 DVPGILKYLKQNNCLVAAASR------TSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIE-------- 80 (280)
Q Consensus 16 g~~~~l~~L~~~g~~~~i~Sn------~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~-------- 80 (280)
...++.+.|++.|.....+.- ... ...+..+..+.- +-||. .++.| .-+..|...+++.+++
T Consensus 21 ~a~~la~~L~~~G~~~~~~P~i~i~~~~~~-~~~~~~~~~l~~-~~~d~-vvfTS~ngv~~~~~~l~~~~~~~~~~~~l~ 97 (381)
T PRK07239 21 RAEELAALLERRGARVVHAPALRIVPLADD-DELRAATRALIA-APPDI-VVATTGIGFRGWVEAADGWGLADELLEALS 97 (381)
T ss_pred CHHHHHHHHHHcCCeEEEecCEEEecCCCc-HHHHHHHHHHHc-CCCCE-EEEeChHHHHHHHHHHHHcCChHHHHHHHc
Confidence 678899999999988776521 111 123344444321 45773 33333 3444566666666654
Q ss_pred CccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCe-eEcc
Q psy8911 81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQK-VMDA 159 (280)
Q Consensus 81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~-~~~~ 159 (280)
--.++.||..... +.++.|+.+.+++...+.+.+........ ..| .. ++-.
T Consensus 98 ~~~i~aVG~~Ta~--aL~~~G~~~~~~p~~~~~e~L~~~l~~~~--------~~g------------------~~vli~~ 149 (381)
T PRK07239 98 SARLLARGPKATG--AIRAAGLREEWSPASESSAEVLEYLLEEG--------VAG------------------KRIAVQL 149 (381)
T ss_pred CCeEEEECccHHH--HHHHcCCCCccCCCCCccHHHHHHHhcCC--------CCC------------------CEEEEEc
Confidence 2356778876553 44567887777765555444433221110 011 00 0000
Q ss_pred CCceeccCCCHHHHHHHHhhCCcEEEEEcCC---Cc--HHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCC--
Q psy8911 160 KGTLIKYYRGVPEILRYLKENKCLVAAASRT---SE--ILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGI-- 232 (280)
Q Consensus 160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~---~~--~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~-- 232 (280)
.+ ...-......+.+.|++.|..+--+.-- .. ........+.+. ..-+|.+...+..-..+|...+...++
T Consensus 150 ~~-~~~~~~~~~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~~~~l~-~~~~d~v~FtS~stv~~f~~~l~~~~~~~ 227 (381)
T PRK07239 150 HG-ATDEWEPLPEFLEALRAAGAEVVPVPVYRWVPPPDPGPLDRLVDAIA-SRGLDAVTFTSAPAVAALLERAREMGLLD 227 (381)
T ss_pred CC-CccccCchHHHHHHHHHCCCEEEEeCcEEEcCCCChhHHHHHHHHHH-cCCccEEEEcCHHHHHHHHHHHHHcCChH
Confidence 00 0000011234556667766544333321 00 010111111110 112343333333334555555554432
Q ss_pred -------CCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHH
Q psy8911 233 -------EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQW 276 (280)
Q Consensus 233 -------~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~ 276 (280)
+.-.++.||-...+ ++++.|+.+ .++..++.+.+-+++..+
T Consensus 228 ~~~~~~~~~~~i~aIGp~Ta~--al~~~G~~~-~vp~~~t~~~Lv~~i~~~ 275 (381)
T PRK07239 228 QLLAALRTDVLAACVGPVTAA--PLVRAGVPT-SAPERMRLGALARHITEE 275 (381)
T ss_pred HHHHhhccCCEEEEECHHHHH--HHHHcCCCc-cCCCCCCHHHHHHHHHHH
Confidence 22245678887776 778888887 477777887777766554
No 425
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=76.25 E-value=12 Score=35.80 Aligned_cols=98 Identities=10% Similarity=0.092 Sum_probs=60.0
Q ss_pred HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911 170 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHD 249 (280)
Q Consensus 170 ~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~ 249 (280)
+...|..+++.+-+++|++-......++.+-..++++ +....+.+.........-+++.|+ -++|||... ...
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~~~~l~~~G~----~~viG~~~~-~~~ 158 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEEDARSCVNDLRARGI----GAVVGAGLI-TDL 158 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEECChHH-HHH
Confidence 5556667777778999999874445555555555554 221122222233333344455565 367899966 589
Q ss_pred ccccCceEEEECCCCC-HHHHHHHHH
Q psy8911 250 VSPLGVTCIHVKKGMS-HAVLQKGLK 274 (280)
Q Consensus 250 a~~aG~~~i~v~~g~~-~~~~~~~~~ 274 (280)
|+++|++.+++.++-+ ...+++++.
T Consensus 159 A~~~gl~~ili~s~esi~~a~~~A~~ 184 (526)
T TIGR02329 159 AEQAGLHGVFLYSADSVRQAFDDALD 184 (526)
T ss_pred HHHcCCceEEEecHHHHHHHHHHHHH
Confidence 9999999999987532 333444444
No 426
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=76.09 E-value=3 Score=37.63 Aligned_cols=48 Identities=15% Similarity=0.033 Sum_probs=33.1
Q ss_pred ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH
Q psy8911 126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 193 (280)
Q Consensus 126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~ 193 (280)
-+++-||=|+||++ .+..+..-..+..-|-.|-++|++++|+|...-+
T Consensus 147 L~LvTFDgDvTLY~--------------------DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~ 194 (408)
T PF06437_consen 147 LKLVTFDGDVTLYE--------------------DGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYP 194 (408)
T ss_pred ceEEEEcCCccccc--------------------CCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 36889999999985 2222333344555566677788999999988433
No 427
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=75.17 E-value=13 Score=35.14 Aligned_cols=83 Identities=10% Similarity=0.106 Sum_probs=61.9
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEER 92 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~ 92 (280)
..||++|=+.+||+-|++...+|..++ -.+..+-+..|++++.- .. .+.+++. +.++.+-.-.=+.|.||..+
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~-~TAa~IA~EAGVDdfiA--ea---tPEdK~~-~I~~eQ~~grlVAMtGDGTN 520 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFIA--EA---TPEDKLA-LIRQEQAEGRLVAMTGDGTN 520 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHhCchhhhh--cC---ChHHHHH-HHHHHHhcCcEEEEcCCCCC
Confidence 478999999999999999999999998 88888889999877766 21 2222333 33444445556889999999
Q ss_pred cccccccCCC
Q psy8911 93 NSHDVSPLGV 102 (280)
Q Consensus 93 ~i~aa~~~G~ 102 (280)
|.-|-.+|..
T Consensus 521 DAPALAqAdV 530 (681)
T COG2216 521 DAPALAQADV 530 (681)
T ss_pred cchhhhhcch
Confidence 9666555544
No 428
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=74.65 E-value=9.6 Score=34.06 Aligned_cols=23 Identities=22% Similarity=0.091 Sum_probs=21.5
Q ss_pred HHHHHHHHHHCCceEEEecCCCc
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSE 39 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~ 39 (280)
+..+++.|+++|++++|+|.+..
T Consensus 54 v~~L~~~L~~~G~~~~IlSRGYg 76 (326)
T PF02606_consen 54 VIWLARLLQARGYRPAILSRGYG 76 (326)
T ss_pred HHHHHHHHHhcCCceEEEcCCCC
Confidence 77899999999999999999888
No 429
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=74.22 E-value=3.5 Score=35.65 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=31.7
Q ss_pred HHHHHHHhCCCCccEEEEeCCcccccccccC---CCeEEEEcC
Q psy8911 70 FANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCILVED 109 (280)
Q Consensus 70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~---G~~~i~v~~ 109 (280)
.+.+++.+|+..+++++|||..+|..+-+.+ +..+|.+..
T Consensus 179 l~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~ 221 (266)
T PRK10187 179 IAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT 221 (266)
T ss_pred HHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC
Confidence 7788899999999999999999996665544 556676643
No 430
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=73.18 E-value=81 Score=31.09 Aligned_cols=96 Identities=16% Similarity=0.093 Sum_probs=54.8
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
....++++.|+++.- =..+.|..+....++--....|..-.|.+.+.++ ++...+.++++..|. .+.+|++ .
T Consensus 167 ~~~~~~~~~l~~~~~-~~~~~~tiC~at~~Rq~a~~~la~~~d~~~vvGg~~SsNt~~L~~i~~~~~~---~~~~ie~-~ 241 (647)
T PRK00087 167 ENFEKVLKELKKKGK-EVKVFNTICNATEVRQEAAEKLAKKVDVMIVVGGKNSSNTTKLYEICKSNCT---NTIHIEN-A 241 (647)
T ss_pred HHHHHHHHHHHHhCC-CcccCCCcchhhhhHHHHHHHHHhhCCEEEEECCCCCccHHHHHHHHHHHCC---CEEEECC-h
Confidence 455666777776632 2233444333333332223334445565433333 455778888888773 4666654 5
Q ss_pred CCcccccccCceEEEECCCCCHHH
Q psy8911 245 RNSHDVSPLGVTCIHVKKGMSHAV 268 (280)
Q Consensus 245 ~di~~a~~aG~~~i~v~~g~~~~~ 268 (280)
.+|..-.-.|..+|+++.|.+.+.
T Consensus 242 ~el~~~~~~~~~~vgitagaStP~ 265 (647)
T PRK00087 242 GELPEEWFKGVKIIGVTAGASTPD 265 (647)
T ss_pred HHCCHHHhCCCCEEEEEeccCCCH
Confidence 566655556788999998876444
No 431
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=72.67 E-value=6.9 Score=34.77 Aligned_cols=28 Identities=21% Similarity=0.109 Sum_probs=25.0
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCC
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRT 190 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~ 190 (280)
+--+.|.+.++++.++++|.++.+.||+
T Consensus 82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG 109 (318)
T TIGR03470 82 EPLLHPEIDEIVRGLVARKKFVYLCTNA 109 (318)
T ss_pred cccccccHHHHHHHHHHcCCeEEEecCc
Confidence 3446799999999999999999999999
No 432
>KOG0209|consensus
Probab=72.44 E-value=12 Score=37.52 Aligned_cols=43 Identities=9% Similarity=0.061 Sum_probs=37.9
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
.+++.|+++.+++.|+..+++++.+|+- .+-.+....+.+|+.
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGD-npLTAchVak~v~iv 715 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGD-NPLTACHVAKEVGIV 715 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCC-Cccchheehheeeee
Confidence 4678999999999999999999999999 787887788887774
No 433
>PF02602 HEM4: Uroporphyrinogen-III synthase HemD; InterPro: IPR003754 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents uroporphyrinogen III synthase (4.2.1.75 from EC) which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the inversion of the final pyrrole unit (ring D) of the linear tetrapyrrole molecule, linking it to the first pyrrole unit (ring A), thereby generating a large macrocyclic structure called uroporphyrinogen III []. The enzyme folds into two alpha/beta domains connected by a beta-ladder, the active site being located between the two domains []. Congenital erythropoietic porphyria (CEP) is an autosomal recessive inborn error of metabolism that results from the markedly deficient activity of uroporphyrinogen III synthase []. ; GO: 0004852 uroporphyrinogen-III synthase activity, 0033014 tetrapyrrole biosynthetic process; PDB: 1WD7_B 1WCX_A 1WCW_A 3D8R_A 3D8T_B 3D8S_A 3D8N_A 3RE1_A 3MW8_A 3P9Z_A ....
Probab=72.20 E-value=2 Score=35.83 Aligned_cols=96 Identities=8% Similarity=0.062 Sum_probs=51.0
Q ss_pred HHHHHHHHCCceEEEecCCCc-----hHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhC-----CCCccEEEEe
Q psy8911 19 GILKYLKQNNCLVAAASRTSE-----IQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATG-----IEYKDMVFFD 88 (280)
Q Consensus 19 ~~l~~L~~~g~~~~i~Sn~~~-----~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g-----~~p~~~l~v~ 88 (280)
++.+.|+++|+....+.--.. ....+..++.+. ...+|.+.+.|..-+..|...++..+ ...-.++.||
T Consensus 2 ~l~~~l~~~G~~~~~~P~i~~~~~~~~~~l~~~l~~l~-~~~~d~viftS~~av~~~~~~l~~~~~~~~~~~~~~i~avG 80 (231)
T PF02602_consen 2 ELAALLRALGAEVIELPLIEIEPLPDLASLEAALEQLP-PGNYDWVIFTSPNAVRAFFKALQSAGADLRLLKNIKIFAVG 80 (231)
T ss_dssp HHHHHHHHTTEEEEEEESEEEEECCHHHHHHHHHHHHT-GCCSSEEEESSHHHHHHHHHHHHHTTHHHHHHHHSEEEESS
T ss_pred HHHHHHHHCCCcEEEECCEEEEeCCCHHHHHHHHHhcc-cCCCCEEEEECHHHHHHHHHHHhhhhhhhhhccCCeEEEEc
Confidence 466778888877655442222 033555666655 45677322222233444555554222 2234677788
Q ss_pred CCcccccccccCCCeEEEEcC-CCchhhhh
Q psy8911 89 DEERNSHDVSPLGVTCILVED-GMTNAITL 117 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~-~~~~~~~~ 117 (280)
++... +.++.|+....++. ..+.+.+.
T Consensus 81 ~~Ta~--~l~~~G~~~~~~~~~~~~s~~L~ 108 (231)
T PF02602_consen 81 PKTAE--ALREYGFQPDFVPSSEGSSEGLA 108 (231)
T ss_dssp HHHHH--HHHHTT-EECEE-TTSSSHHHHH
T ss_pred HHHHH--HHHHcCCCccccCCCCCCHHHHH
Confidence 76654 44456888888876 44544443
No 434
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=71.52 E-value=18 Score=29.15 Aligned_cols=45 Identities=22% Similarity=0.262 Sum_probs=31.6
Q ss_pred eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc
Q psy8911 163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY 208 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~ 208 (280)
+.-+.|.+.++++.+++.|+++.+.||+...+.++.+++ .|+.++
T Consensus 72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~~l~~-~g~~~~ 116 (191)
T TIGR02495 72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLEELLE-EGLVDY 116 (191)
T ss_pred cccCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHHHHHh-cCCCcE
Confidence 344567899999999999999999999954444444333 353333
No 435
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=71.45 E-value=8.4 Score=34.35 Aligned_cols=29 Identities=10% Similarity=0.195 Sum_probs=25.7
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCc
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSE 192 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~ 192 (280)
..++|.+.++++.++++|++++|.||+..
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 34689999999999999999999999933
No 436
>KOG1618|consensus
Probab=70.70 E-value=5.2 Score=35.36 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=58.2
Q ss_pred eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC----CcEEEEEcCCCcHH----HHHHH
Q psy8911 128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSEIL----HAKQI 199 (280)
Q Consensus 128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~----g~~~~i~T~~~~~~----~~~~~ 199 (280)
.+.||.||.|+- + -++.||+.+.|+.|.++ .++...+||+ .-. .++.+
T Consensus 37 gfafDIDGVL~R---------------------G--~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNG-Gg~~E~~rA~~l 92 (389)
T KOG1618|consen 37 GFAFDIDGVLFR---------------------G--HRPIPGALKALRRLVDNQGQLKIPFVFLTNG-GGILESSRAQEL 92 (389)
T ss_pred eEEEecccEEEe---------------------c--CCCCcchHHHHHHHHhcCCCeeccEEEEeCC-CCcchhhHHHHH
Confidence 678999999852 2 35789999999999988 7999999998 422 33344
Q ss_pred HhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911 200 LNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 259 (280)
Q Consensus 200 l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~ 259 (280)
-+.||..=-=+-+ +-+ . .+|+.+. ....++++.+|+... .+.|+..|.+-|.
T Consensus 93 S~~Lgv~Vs~dqv-iqS-H--sP~r~l~---~~~~k~vLv~G~~~v-r~vAegyGFk~Vv 144 (389)
T KOG1618|consen 93 SALLGVEVSADQV-IQS-H--SPFRLLV---EYHYKRVLVVGQGSV-REVAEGYGFKNVV 144 (389)
T ss_pred HHhhCCccCHHHH-Hhh-c--ChHHHHh---hhhhceEEEecCCcH-HHHhhccCcccee
Confidence 4444443100000 000 0 1243333 244567777775443 2455556655443
No 437
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=70.62 E-value=8.9 Score=30.97 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=31.4
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHh
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLD 48 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~ 48 (280)
+.+.-++|.+.++++.+++.|+.+.+.||+..++.++.+++
T Consensus 70 GGEPll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~~l~~ 110 (191)
T TIGR02495 70 GGEPTLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLEELLE 110 (191)
T ss_pred CCcccCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHHHHHh
Confidence 34456678899999999999999999999987444444433
No 438
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=70.34 E-value=6.1 Score=30.88 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=26.2
Q ss_pred ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHH
Q psy8911 13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQL 46 (280)
Q Consensus 13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~ 46 (280)
..+.+.++++.+++.|+++++-||...++..+.+
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~i 106 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGLEPKDIPLEL 106 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
Confidence 3467999999999999999999997663333333
No 439
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=69.32 E-value=13 Score=33.92 Aligned_cols=43 Identities=12% Similarity=0.004 Sum_probs=29.1
Q ss_pred eccCCCHHHHHHHHhhC-CcE-EEEEcCCCcH-HHHHHHHhhCCCcc
Q psy8911 164 IKYYRGVPEILRYLKEN-KCL-VAAASRTSEI-LHAKQILNLINLNQ 207 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~-g~~-~~i~T~~~~~-~~~~~~l~~~gl~~ 207 (280)
..+.+++.++++.+++. |+. +.+.||+ .. ...-..+...|++.
T Consensus 117 Pllr~dl~eli~~l~~~~gi~~i~itTNG-~lL~~~~~~L~~aGld~ 162 (373)
T PLN02951 117 PTLRKDIEDICLQLSSLKGLKTLAMTTNG-ITLSRKLPRLKEAGLTS 162 (373)
T ss_pred CcchhhHHHHHHHHHhcCCCceEEEeeCc-chHHHHHHHHHhCCCCe
Confidence 44678899999999986 874 8999999 43 21123344556654
No 440
>KOG1618|consensus
Probab=69.04 E-value=16 Score=32.42 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=59.9
Q ss_pred eecCCHHHHHHHHHHC----CceEEEecCCCc---hHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccE
Q psy8911 12 KYYPDVPGILKYLKQN----NCLVAAASRTSE---IQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDM 84 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~----g~~~~i~Sn~~~---~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~ 84 (280)
.+.||+.+.|+.|.++ .++...+||+.. ...++.+-+.+|+.=-=| +++.|..+ |+... ....+++
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~d--qviqSHsP--~r~l~---~~~~k~v 123 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSAD--QVIQSHSP--FRLLV---EYHYKRV 123 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHH--HHHhhcCh--HHHHh---hhhhceE
Confidence 5789999999999999 899999999854 144555666666543333 34333322 55544 3456889
Q ss_pred EEEeCCcccccccccCCCeEEE
Q psy8911 85 VFFDDEERNSHDVSPLGVTCIL 106 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~ 106 (280)
+++|+. +-.+.|...|++-|.
T Consensus 124 Lv~G~~-~vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 124 LVVGQG-SVREVAEGYGFKNVV 144 (389)
T ss_pred EEecCC-cHHHHhhccCcccee
Confidence 999964 335778889998664
No 441
>PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Probab=68.90 E-value=84 Score=31.07 Aligned_cols=89 Identities=7% Similarity=-0.034 Sum_probs=51.8
Q ss_pred eecCCHHHHHHHHHHCCceEEEecC------CCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCccE
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASR------TSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYKDM 84 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn------~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~~~ 84 (280)
++.+...++...|++.|+....+.- ... ...+..+..+ +-||. .|+.| .-+..|...++......-.+
T Consensus 10 Rp~~qa~~la~~L~~~G~~vi~~Pli~i~p~~~~-~~l~~~l~~L---~~yd~-iIFTS~nAV~~~~~~l~~~~~~~~~i 84 (656)
T PRK06975 10 RPDGQSAALAAQLAAAGLDVLDFPLLDIAPVADD-APLRAALARL---SDYAL-VVFVSPNAVDRALARLDAIWPHALPV 84 (656)
T ss_pred CcHhHHHHHHHHHHHcCCCEEEcccEEeeCCCCh-HHHHHHHHhC---CCCCE-EEEECHHHHHHHHHHHHhhCccCCeE
Confidence 5667788999999999988776521 111 1233444443 24673 33334 34555555554433333467
Q ss_pred EEEeCCcccccccccCCCeEEEE
Q psy8911 85 VFFDDEERNSHDVSPLGVTCILV 107 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~v 107 (280)
..||..... +.++.|+.+.++
T Consensus 85 ~AVG~~Ta~--aL~~~Gi~~~~~ 105 (656)
T PRK06975 85 AVVGPGSVA--ALARHGIAAPAH 105 (656)
T ss_pred EEECHHHHH--HHHHcCCCCcee
Confidence 888886654 345678876655
No 442
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=68.61 E-value=12 Score=35.83 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccc
Q psy8911 16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 95 (280)
Q Consensus 16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~ 95 (280)
++...|...+..+-++++++-......++.+.+.+++. ++...+.+..+...-..-+++.|+ -++|||... ..
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~~~~l~~~G~----~~viG~~~~-~~ 157 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEEDARSCVNDLRARGI----GAVVGAGLI-TD 157 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEECChHH-HH
Confidence 45555666667677889988766545566666666653 221133334444444444455565 467899854 68
Q ss_pred ccccCCCeEEEEcCC
Q psy8911 96 DVSPLGVTCILVEDG 110 (280)
Q Consensus 96 aa~~~G~~~i~v~~~ 110 (280)
.|+++|+++|++.++
T Consensus 158 ~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 158 LAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHcCCceEEEecH
Confidence 999999999999876
No 443
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=67.36 E-value=24 Score=31.71 Aligned_cols=91 Identities=15% Similarity=0.258 Sum_probs=53.0
Q ss_pred cCCHHHHHHHHHHC-CceEEEe-cCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911 14 YPDVPGILKYLKQN-NCLVAAA-SRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 91 (280)
Q Consensus 14 ~~g~~~~l~~L~~~-g~~~~i~-Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~ 91 (280)
...+.++|+.|.+. ++++.+. .|++. ....+.+.+. .+ +.+.++.+-....|..+++.. .++|+||-
T Consensus 199 ~~~i~~~l~~L~~~~~~~vi~~~hn~p~--~~~~i~~~l~--~~-~~v~~~~~l~~~~~l~ll~~a------~~vvgdSs 267 (346)
T PF02350_consen 199 LEQILEALKALAERQNVPVIFPLHNNPR--GSDIIIEKLK--KY-DNVRLIEPLGYEEYLSLLKNA------DLVVGDSS 267 (346)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEE--S-HH--HHHHHHHHHT--T--TTEEEE----HHHHHHHHHHE------SEEEESSH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEecCCch--HHHHHHHHhc--cc-CCEEEECCCCHHHHHHHHhcc------eEEEEcCc
Confidence 33677888888887 6766443 34443 3344433332 22 333344454555688888765 67799999
Q ss_pred cccc-ccccCCCeEEEEcCCCchhhh
Q psy8911 92 RNSH-DVSPLGVTCILVEDGMTNAIT 116 (280)
Q Consensus 92 ~~i~-aa~~~G~~~i~v~~~~~~~~~ 116 (280)
+|. .|-..|..+|-+++...+++.
T Consensus 268 -GI~eEa~~lg~P~v~iR~~geRqe~ 292 (346)
T PF02350_consen 268 -GIQEEAPSLGKPVVNIRDSGERQEG 292 (346)
T ss_dssp -HHHHHGGGGT--EEECSSS-S-HHH
T ss_pred -cHHHHHHHhCCeEEEecCCCCCHHH
Confidence 988 999999999999765554443
No 444
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=67.02 E-value=81 Score=29.15 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=55.5
Q ss_pred HHHHHHHHHHC--CceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcc-c
Q psy8911 17 VPGILKYLKQN--NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEER-N 93 (280)
Q Consensus 17 ~~~~l~~L~~~--g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~-~ 93 (280)
+..+++.|++. ++++-+.|-++. -.+..-+.++-. .. +.+..=+........++ ...|+-+|+++--.| +
T Consensus 65 ~~pLv~~l~~~~P~~~ilvTt~T~T--g~e~a~~~~~~~--v~-h~YlP~D~~~~v~rFl~--~~~P~l~Ii~EtElWPn 137 (419)
T COG1519 65 ALPLVRALRERFPDLRILVTTMTPT--GAERAAALFGDS--VI-HQYLPLDLPIAVRRFLR--KWRPKLLIIMETELWPN 137 (419)
T ss_pred HHHHHHHHHHhCCCCCEEEEecCcc--HHHHHHHHcCCC--eE-EEecCcCchHHHHHHHH--hcCCCEEEEEeccccHH
Confidence 67899999998 777777665555 345555555522 11 12222233333333333 368999999998754 5
Q ss_pred -ccccccCCCeEEEEcC
Q psy8911 94 -SHDVSPLGVTCILVED 109 (280)
Q Consensus 94 -i~aa~~~G~~~i~v~~ 109 (280)
|..+++.|++.+.+..
T Consensus 138 li~e~~~~~~p~~LvNa 154 (419)
T COG1519 138 LINELKRRGIPLVLVNA 154 (419)
T ss_pred HHHHHHHcCCCEEEEee
Confidence 9999999999999955
No 445
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=67.00 E-value=87 Score=27.35 Aligned_cols=207 Identities=14% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCc-eE------------EEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccE
Q psy8911 18 PGILKYLKQNNC-LV------------AAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDM 84 (280)
Q Consensus 18 ~~~l~~L~~~g~-~~------------~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~ 84 (280)
...++.|+++|+ .+ .|++....+......++..|+ ...| -..+.+..-+...+++.-.--++
T Consensus 42 ~~Vv~~L~~~Gv~~~v~~~~~v~~~~~ViirAHGv~~~~~~~~~~~gl-~viD----aTCP~V~kv~~~v~~~~~~Gy~i 116 (280)
T TIGR00216 42 PQVVERLRERGVFFFLEDLDEVAAGDTVIIRAHGVPPEVREELEKKGL-EVID----ATCPLVTKVHNAVKKYAKEGYHV 116 (280)
T ss_pred HHHHHHHHHCCCEEeecCcccCCCCCEEEEeCCCCCHHHHHHHHHCCC-eEEe----CCCcccHHHHHHHHHHHhCCCEE
Q ss_pred EEEeCCcc-ccccccc-CCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCc
Q psy8911 85 VFFDDEER-NSHDVSP-LGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGT 162 (280)
Q Consensus 85 l~v~D~~~-~i~aa~~-~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~ 162 (280)
+++||..+ .+.+-.. ++-.++.+.+..+.+.+............ |+
T Consensus 117 iiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~~~~~v~vvsQT-------T~------------------------- 164 (280)
T TIGR00216 117 ILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFKVEDLLGVVSQT-------TL------------------------- 164 (280)
T ss_pred EEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCCCCCcEEEEEcC-------CC-------------------------
Q ss_pred eeccCCCHHHHHHHHhhCCc--EEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcE
Q psy8911 163 LIKYYRGVPEILRYLKENKC--LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDM 237 (280)
Q Consensus 163 ~~~~~~g~~~~L~~L~~~g~--~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~ 237 (280)
......++++.|+++ + +-..+.|.......++--....|..-.|.+.+.++ ++...+.++++..+.+
T Consensus 165 ---~~~~~~~i~~~l~~~-~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~miVVGg~nSsNT~rL~ei~~~~~~~---- 236 (280)
T TIGR00216 165 ---SQEDTKEIVAELKAR-VPQKEVPVFNTICYATQNRQDAVKELAPEVDLMIVIGGKNSSNTTRLYEIAEEHGPP---- 236 (280)
T ss_pred ---cHHHHHHHHHHHHHh-CCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEEEECCCCCchHHHHHHHHHHhCCC----
Q ss_pred EEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911 238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL 269 (280)
Q Consensus 238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~ 269 (280)
.|.=++..|+....=.|...|+++.|.+-+.|
T Consensus 237 t~~Ie~~~el~~~~l~~~~~VGiTAGASTP~~ 268 (280)
T TIGR00216 237 SYLIETAEELPEEWLKGVKVVGITAGASTPDW 268 (280)
T ss_pred EEEECChHHCCHHHhCCCCEEEEEecCCCCHH
No 446
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=66.41 E-value=33 Score=27.83 Aligned_cols=87 Identities=11% Similarity=0.149 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHC--CceEEEecCCCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911 16 DVPGILKYLKQN--NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYKDMVFFDDEER 92 (280)
Q Consensus 16 g~~~~l~~L~~~--g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~~~l~v~D~~~ 92 (280)
-+.++++.|+++ |+++.+.|+++. - .+...+.++ +... ..+.. +........++. +.|+-++++|-..+
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~t-g-~~~~~~~~~--~~v~--~~~~P~D~~~~~~rfl~~--~~P~~~i~~EtElW 107 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPT-G-REMARKLLP--DRVD--VQYLPLDFPWAVRRFLDH--WRPDLLIWVETELW 107 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CC-H-HHHHHGG-G--GG-S--EEE---SSHHHHHHHHHH--H--SEEEEES----
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCc-h-HHHHHHhCC--CCeE--EEEeCccCHHHHHHHHHH--hCCCEEEEEccccC
Confidence 367899999987 899999998877 2 233333322 2222 23333 333335555555 47899999998754
Q ss_pred -c-ccccccCCCeEEEEcCC
Q psy8911 93 -N-SHDVSPLGVTCILVEDG 110 (280)
Q Consensus 93 -~-i~aa~~~G~~~i~v~~~ 110 (280)
+ +..|++.|+.++++..-
T Consensus 108 Pnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 108 PNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp HHHHHH-----S-EEEEEE-
T ss_pred HHHHHHHhhcCCCEEEEeee
Confidence 5 88999999999999543
No 447
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=65.67 E-value=8.3 Score=32.18 Aligned_cols=31 Identities=10% Similarity=0.095 Sum_probs=25.7
Q ss_pred CcceecCC-HHHHHHHHHHCCceEEEecCCCc
Q psy8911 9 AHIKYYPD-VPGILKYLKQNNCLVAAASRTSE 39 (280)
Q Consensus 9 ~~~~~~~g-~~~~l~~L~~~g~~~~i~Sn~~~ 39 (280)
.+..+.++ +.++++.+|++|+.+++-||+..
T Consensus 47 GEPllq~~fl~~l~~~~k~~gi~~~leTnG~~ 78 (213)
T PRK10076 47 GEVLMQAEFATRFLQRLRLWGVSCAIETAGDA 78 (213)
T ss_pred chHHcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 33445555 78999999999999999999966
No 448
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=65.56 E-value=33 Score=30.81 Aligned_cols=229 Identities=11% Similarity=0.139 Sum_probs=104.7
Q ss_pred HHHHC-CceE-EEecCCC--chHHHHHHHhhcCccccccccceecCCChhH----------HHHHHHHhCCCCccEEEEe
Q psy8911 23 YLKQN-NCLV-AAASRTS--EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH----------FANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 23 ~L~~~-g~~~-~i~Sn~~--~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~----------~~~~~~~~g~~p~~~l~v~ 88 (280)
+|++. ++.+ .|+|.++ . ++...+.+.+++ ...+ .....+.... +..++++. .|+=+++.|
T Consensus 2 ~l~~~~~~~~~li~tG~H~~~-~~g~~~~~~f~i-~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Pd~Vlv~G 75 (346)
T PF02350_consen 2 ALQKDPGFELILIVTGQHLDP-EMGDTFFEGFGI-PKPD--YLLDSDSQSMAKSTGLAIIELADVLERE--KPDAVLVLG 75 (346)
T ss_dssp HHHCSTTEEEEEEEECSS--C-HHHHHHHHHTT---SEE--EE--STTS-HHHHHHHHHHHHHHHHHHH--T-SEEEEET
T ss_pred hhhhCCCCCEEEEEeCCCCCH-HHHHHHHhhCCC-CCCC--cccccccchHHHHHHHHHHHHHHHHHhc--CCCEEEEEc
Confidence 45655 6666 5667766 5 778888888887 5566 3333222111 44444444 899999999
Q ss_pred CCcc---cccccccCCCeEEEEcCCCchhhhhcc------ccccccceeEEEec---------------------CCCCC
Q psy8911 89 DEER---NSHDVSPLGVTCILVEDGMTNAITLYG------RSVFIISNHLSKKL---------------------DYTLW 138 (280)
Q Consensus 89 D~~~---~i~aa~~~G~~~i~v~~~~~~~~~~~~------~~~~~~~~~~~fd~---------------------DgTL~ 138 (280)
|+.. ...+|..+++..+++..|....+...+ +.-...-..+-|-. -.|.+
T Consensus 76 D~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~ 155 (346)
T PF02350_consen 76 DRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGI 155 (346)
T ss_dssp TSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-SEEEESSHHHHHHHHHTT--GGGEEE---HHH
T ss_pred CCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHH
Confidence 9965 466777799999999776211111100 00000111122211 11111
Q ss_pred Ccccc--ccc-Ccc--cc----cCCe--eEccCCce----eccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhh
Q psy8911 139 PLHVH--DLV-APF--KK----IGQK--VMDAKGTL----IKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 139 d~~~~--~~~-~~~--~~----~~~~--~~~~~~~~----~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
|.... ... .++ .. .... +...+... -..+..+.++|+.|.+. ++++.+.--+ .+.....+.+.
T Consensus 156 D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn-~p~~~~~i~~~ 234 (346)
T PF02350_consen 156 DALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHN-NPRGSDIIIEK 234 (346)
T ss_dssp HHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S--HHHHHHHHHH
T ss_pred HHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecC-CchHHHHHHHH
Confidence 11000 000 111 00 1111 11122111 11234666777787776 7765544433 33433333332
Q ss_pred CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcc-cccccCceEEEECCCCCHHH
Q psy8911 203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSH-DVSPLGVTCIHVKKGMSHAV 268 (280)
Q Consensus 203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~-~a~~aG~~~i~v~~g~~~~~ 268 (280)
+ ..+ +.+...+.-.-..|..+++. -.++||||- +|+ .|-..|.+|+-++....+++
T Consensus 235 l--~~~-~~v~~~~~l~~~~~l~ll~~------a~~vvgdSs-GI~eEa~~lg~P~v~iR~~geRqe 291 (346)
T PF02350_consen 235 L--KKY-DNVRLIEPLGYEEYLSLLKN------ADLVVGDSS-GIQEEAPSLGKPVVNIRDSGERQE 291 (346)
T ss_dssp H--TT--TTEEEE----HHHHHHHHHH------ESEEEESSH-HHHHHGGGGT--EEECSSS-S-HH
T ss_pred h--ccc-CCEEEECCCCHHHHHHHHhc------ceEEEEcCc-cHHHHHHHhCCeEEEecCCCCCHH
Confidence 2 222 23333333344567777765 456899999 999 99999999999965444443
No 449
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=65.11 E-value=18 Score=32.17 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=30.2
Q ss_pred eccCCCHHHHHHHHhhCCc--EEEEEcCCCcHH-HHHHHHhhCCCcc
Q psy8911 164 IKYYRGVPEILRYLKENKC--LVAAASRTSEIL-HAKQILNLINLNQ 207 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~--~~~i~T~~~~~~-~~~~~l~~~gl~~ 207 (280)
--+.++..++++.+++.+. .+++.||+ ..- .....|+..|++.
T Consensus 72 Pllr~dl~~li~~i~~~~~l~~i~itTNG-~ll~~~~~~L~~aGl~~ 117 (329)
T PRK13361 72 PLVRRGCDQLVARLGKLPGLEELSLTTNG-SRLARFAAELADAGLKR 117 (329)
T ss_pred CCccccHHHHHHHHHhCCCCceEEEEeCh-hHHHHHHHHHHHcCCCe
Confidence 3467899999999998764 79999999 432 2223455567654
No 450
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=64.76 E-value=16 Score=28.37 Aligned_cols=74 Identities=22% Similarity=0.285 Sum_probs=49.0
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCC--CchHHH----HHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRT--SEIQGA----QQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYK 82 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~--~~~~~~----~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~ 82 (280)
..+...|++.+++++|-+. |.++|+|.. .+ ... +-+.+.+++.++=. .|+|+.+- +- .
T Consensus 65 RnL~V~p~aq~v~keLt~~-y~vYivtaamdhp-~s~~dK~eWl~E~FPFi~~qn--~vfCgnKn-----------iv-k 128 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHP-KSCEDKGEWLKEKFPFISYQN--IVFCGNKN-----------IV-K 128 (180)
T ss_pred hhcCccccHHHHHHHHHhh-heEEEEEeccCCc-hhHHHHHHHHHHHCCCCChhh--EEEecCCC-----------eE-E
Confidence 3467889999999999987 999999987 22 333 33444445444444 66777653 11 2
Q ss_pred cEEEEeCCcccccccc
Q psy8911 83 DMVFFDDEERNSHDVS 98 (280)
Q Consensus 83 ~~l~v~D~~~~i~aa~ 98 (280)
.=++|+|.+.+++.-+
T Consensus 129 aDilIDDnp~nLE~F~ 144 (180)
T COG4502 129 ADILIDDNPLNLENFK 144 (180)
T ss_pred eeEEecCCchhhhhcc
Confidence 2367899988877544
No 451
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=64.36 E-value=7.7 Score=31.58 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=30.4
Q ss_pred HHHHHHHHCCceEEEecCCCchHHHHHHHhhc-----CccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccc
Q psy8911 19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-----NWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERN 93 (280)
Q Consensus 19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-----~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~ 93 (280)
.+|..++++|++++++...-. +..-.....+ .+...|| .|...++. -..-+.++|++++++.+.|+-..|
T Consensus 109 nll~~a~~~~ip~~LvNarls-~~s~~~~~~~~~~~r~~l~~f~--~i~aqs~~--da~r~~~lG~~~~~v~v~GnlKfd 183 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLS-ERSFRRYRRFPFLFRPLLSRFD--RILAQSEA--DAERFRKLGAPPERVHVTGNLKFD 183 (186)
T ss_dssp HHHHH-----S-EEEEEE---------------HHHHHHGGG-S--EEEESSHH--HHHHHHTTT-S--SEEE---GGG-
T ss_pred HHHHHHhhcCCCEEEEeeeec-cccchhhhhhHHHHHHHHHhCC--EEEECCHH--HHHHHHHcCCCcceEEEeCcchhc
Confidence 578889999999999976554 2211111111 2346677 66655544 344556799999999999998766
Q ss_pred c
Q psy8911 94 S 94 (280)
Q Consensus 94 i 94 (280)
.
T Consensus 184 ~ 184 (186)
T PF04413_consen 184 Q 184 (186)
T ss_dssp -
T ss_pred c
Confidence 4
No 452
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=63.49 E-value=18 Score=29.84 Aligned_cols=102 Identities=12% Similarity=0.019 Sum_probs=56.5
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCCcH-----HHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHc---CCCCCcEEE
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTSEI-----LHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKAT---GIEYKDMVF 239 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~~~-----~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~---~~~~~~~l~ 239 (280)
++..++.+.|++.|+.+..+.-- .. ......+..+. -++.+.+.+..-...+...+... -.....++.
T Consensus 8 ~~~~~l~~~L~~~G~~~~~~p~~-~~~~~~~~~~~~~~~~~~---~~~~iiftS~~av~~~~~~~~~~~~~~~~~~~~~a 83 (239)
T cd06578 8 PQADELAALLEALGAEVLELPLI-EIEPLDDAELDAALADLD---EYDWLIFTSPNAVEAFFEALEELGLRALAGLKIAA 83 (239)
T ss_pred HHhHHHHHHHHHcCCcEEEeeeE-EEecCChHHHHHHHHhcC---CCCEEEEECHHHHHHHHHHHHhhCCccccCCEEEE
Confidence 34566777888888665544322 11 12233333332 45544333333345555555543 245556777
Q ss_pred EeCCcCCcccccccCceEEEECCCCCHHHHHHHHHH
Q psy8911 240 FDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQ 275 (280)
Q Consensus 240 igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~ 275 (280)
||....+ ++++.|...+.++...+...+.+.+..
T Consensus 84 vG~~Ta~--~l~~~g~~~~~~~~~~~~~~L~~~i~~ 117 (239)
T cd06578 84 VGPKTAE--ALREAGLTADFVPEEGDSEGLLELLEL 117 (239)
T ss_pred ECHHHHH--HHHHcCCCceeCCCccCHHHHHHHHHh
Confidence 7877776 667788877777665666666555544
No 453
>KOG2832|consensus
Probab=63.43 E-value=21 Score=32.12 Aligned_cols=79 Identities=16% Similarity=0.176 Sum_probs=56.7
Q ss_pred eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCC---HHHHHHHHHHcCCCCCcEEEE
Q psy8911 164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPK---TTHFESLKKATGIEYKDMVFF 240 (280)
Q Consensus 164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k---~~~~~~~~~~~~~~~~~~l~i 240 (280)
..--||+..+|.++. +.|.++|.|+. ....+..+++.++=..|+.+....+..+ ..++.- +..+|=+++.+|+|
T Consensus 213 f~kRPgvD~FL~~~a-~~yEIVi~sse-~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~~G~HvKd-ls~LNRdl~kVivV 289 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLA-KYYEIVVYSSE-QGMTVFPLLDALDPKGYISYKLFRGATKYEEGHHVKD-LSKLNRDLQKVIVV 289 (393)
T ss_pred eccCchHHHHHHhhc-ccceEEEEecC-CccchhhhHhhcCCcceEEEEEecCcccccCccchhh-hhhhccccceeEEE
Confidence 456699999999998 55999999999 8888888888887666665533322211 233322 46778899999999
Q ss_pred eCCcC
Q psy8911 241 DDEER 245 (280)
Q Consensus 241 gD~~~ 245 (280)
+=..+
T Consensus 290 d~d~~ 294 (393)
T KOG2832|consen 290 DFDAN 294 (393)
T ss_pred Ecccc
Confidence 75544
No 454
>cd05015 SIS_PGI_1 Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the first SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate. As an extracellular protein, PGI also has functions equivalent to neuroleukin (NLK), autocrine motility factor (AMF), and maturation factor (MF). Evidence suggests that PGI, NLK, AMF, and MF are closely related or identical. NLK is a neurotrophic growth factor that promotes regeneration and survival of neurons. The dimeric form of NLK has isomerase function, whereas its monomeric form carries out neurotrophic activity. AMF is a cytokine that stimulates cell migration and metastasis. MF mediates the differentiation of human myeloid leukemic HL-60 cells to terminal monocytic cells.
Probab=63.38 E-value=71 Score=25.03 Aligned_cols=88 Identities=9% Similarity=-0.006 Sum_probs=53.4
Q ss_pred HHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHH------HHHHHHHcCC--CCCcEEEEeCCcCCc
Q psy8911 176 YLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTH------FESLKKATGI--EYKDMVFFDDEERNS 247 (280)
Q Consensus 176 ~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~------~~~~~~~~~~--~~~~~l~igD~~~di 247 (280)
.+...+.++.+++|. .++.....+..+...+..-.+.+.++.-++. ++.++++.+. ....++.|=|...-+
T Consensus 44 ~~~~~~~~i~~~~~~-D~~~~~~~~~~~~~~~tlvi~iSkSG~T~Et~~~~~~a~~~l~~~~~~~~~~~~vaiT~~~s~l 122 (158)
T cd05015 44 PYFKGGLRLHFVSNV-DPDDLAELLKKLDPETTLFIVISKSGTTLETLANARLAREWLEEAGGDDLAKHFVAITDNGSGL 122 (158)
T ss_pred hhccCCceEEEEeCC-CHHHHHHHHHhCCcccEEEEEEECCcCCHHHHHHHHHHHHHHHHhccccccceEEEEcCCChHH
Confidence 333346788889998 7777677777776444332223444433322 3444444443 566888998855555
Q ss_pred cc-ccccCceEEEECCCC
Q psy8911 248 HD-VSPLGVTCIHVKKGM 264 (280)
Q Consensus 248 ~~-a~~aG~~~i~v~~g~ 264 (280)
.. |...+.++..++.+.
T Consensus 123 ~~~a~~~~~~~~~~~~~v 140 (158)
T cd05015 123 LKKAGIEGLNTFEIPDWV 140 (158)
T ss_pred HHHcCCCcceeeeCCCCC
Confidence 54 666788888877554
No 455
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=63.29 E-value=7.3 Score=33.05 Aligned_cols=31 Identities=10% Similarity=0.022 Sum_probs=27.1
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCc
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSE 39 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~ 39 (280)
.+.-++++..++++.|++.|+++.|-||+..
T Consensus 81 GEPll~~~l~~li~~l~~~g~~v~leTNGtl 111 (238)
T TIGR03365 81 GNPALQKPLGELIDLGKAKGYRFALETQGSV 111 (238)
T ss_pred CchhhhHhHHHHHHHHHHCCCCEEEECCCCC
Confidence 3445678999999999999999999999998
No 456
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=63.28 E-value=10 Score=32.24 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCC--ccEEEEeCCccc-ccccccCCCeEEE
Q psy8911 70 FANLKKATGIEY--KDMVFFDDEERN-SHDVSPLGVTCIL 106 (280)
Q Consensus 70 ~~~~~~~~g~~p--~~~l~v~D~~~~-i~aa~~~G~~~i~ 106 (280)
|+.-++.+|++| +++-||+|...+ .-+|.-.||.+.+
T Consensus 91 YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVWl 130 (279)
T cd00733 91 YLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVWL 130 (279)
T ss_pred HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEE
Confidence 999999999988 589999999654 8888889988763
No 457
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=63.21 E-value=9.3 Score=32.56 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=31.5
Q ss_pred HHHHHHHhCCCC--ccEEEEeCCccc-ccccccCCCeEEE
Q psy8911 70 FANLKKATGIEY--KDMVFFDDEERN-SHDVSPLGVTCIL 106 (280)
Q Consensus 70 ~~~~~~~~g~~p--~~~l~v~D~~~~-i~aa~~~G~~~i~ 106 (280)
|+.-++.+|++| .++-||+|...+ .-+|.-.||.+.+
T Consensus 95 YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWl 134 (283)
T PRK09348 95 YLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVWL 134 (283)
T ss_pred HHHHHHHhCCCccccceeEeecCCCCCcccccccceEEEE
Confidence 999999999988 589999999654 8888889988763
No 458
>KOG0204|consensus
Probab=63.08 E-value=45 Score=33.71 Aligned_cols=41 Identities=22% Similarity=0.205 Sum_probs=38.1
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 206 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~ 206 (280)
+..||+++.++.+++.|+++-.+|+. ....++.+....||.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGD-NI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGD-NINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCC-cHHHHHHHHHHcccc
Confidence 45699999999999999999999999 899999999999985
No 459
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=62.81 E-value=4.3 Score=32.65 Aligned_cols=93 Identities=19% Similarity=0.194 Sum_probs=49.4
Q ss_pred eecCCHHHHHHHH---HHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911 12 KYYPDVPGILKYL---KQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 12 ~~~~g~~~~l~~L---~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
..-+...++|+.| +..+-++++++..........+-+.+++. . . .+.-........+++++.-+- --++||
T Consensus 58 ~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-i-~---~~~~~~~~e~~~~i~~~~~~G-~~viVG 131 (176)
T PF06506_consen 58 EIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-I-K---IYPYDSEEEIEAAIKQAKAEG-VDVIVG 131 (176)
T ss_dssp EE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-E-E---EEEESSHHHHHHHHHHHHHTT---EEEE
T ss_pred EECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-e-E---EEEECCHHHHHHHHHHHHHcC-CcEEEC
Confidence 3444445555544 45577899988766633356666666652 1 1 111122233444444431111 347889
Q ss_pred CCcccccccccCCCeEEEEcCCC
Q psy8911 89 DEERNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~~~ 111 (280)
+... ...|++.|++++++.++.
T Consensus 132 g~~~-~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 132 GGVV-CRLARKLGLPGVLIESGE 153 (176)
T ss_dssp SHHH-HHHHHHTTSEEEESS--H
T ss_pred CHHH-HHHHHHcCCcEEEEEecH
Confidence 9865 689999999999997653
No 460
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=62.40 E-value=22 Score=32.46 Aligned_cols=119 Identities=12% Similarity=0.053 Sum_probs=74.1
Q ss_pred cceeEEEecCCCCCCccccccc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911 125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 202 (280)
Q Consensus 125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~ 202 (280)
.++++..|+|.||..+...... ..|.... ... -.+.-.+.--|++..++..+++- +++.+.|.. ...+++.+++.
T Consensus 211 ~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~-~~~~~~v~kRp~l~~fl~~ls~~-~~l~~ft~s-~~~y~~~v~d~ 287 (390)
T COG5190 211 PKKTLVLDLDETLVHSSFRYITLLDFLVKVEISL-LQHLVYVSKRPELDYFLGKLSKI-HELVYFTAS-VKRYADPVLDI 287 (390)
T ss_pred CccccccCCCccceeeccccccccchhhcccccc-ceeEEEEcCChHHHHHHhhhhhh-EEEEEEecc-hhhhcchHHHh
Confidence 3456678888887654332211 1111000 000 01122344568888888888877 999999999 88888888888
Q ss_pred CCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCc
Q psy8911 203 INLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNS 247 (280)
Q Consensus 203 ~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di 247 (280)
++=.++|........ +... |.+-+..++.+-+.+++|++++.--
T Consensus 288 l~~~k~~~~~lfr~sc~~~~G~-~ikDis~i~r~l~~viiId~~p~SY 334 (390)
T COG5190 288 LDSDKVFSHRLFRESCVSYLGV-YIKDISKIGRSLDKVIIIDNSPASY 334 (390)
T ss_pred ccccceeehhhhcccceeccCc-hhhhHHhhccCCCceEEeeCChhhh
Confidence 876666653211111 2222 6666677889999999999999853
No 461
>KOG4132|consensus
Probab=61.95 E-value=67 Score=27.09 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=66.3
Q ss_pred CHHHHH-HHHhhCCcEEEEE----cCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcC--CCCCcEEEEe
Q psy8911 169 GVPEIL-RYLKENKCLVAAA----SRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATG--IEYKDMVFFD 241 (280)
Q Consensus 169 g~~~~L-~~L~~~g~~~~i~----T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~--~~~~~~l~ig 241 (280)
..+++| ++|+++|+++=-+ |.. .++....+...+...+..+.++.++........+.+...+ .+--..+.||
T Consensus 143 ~~rdil~kkL~~~G~~Vds~~VY~T~~-hp~~~~~~~~alk~~~~~d~ivfFSPsgv~~~lq~f~~~~~s~~~~k~aaIG 221 (260)
T KOG4132|consen 143 LRRDILPKKLHDKGIRVDSCEVYETRE-HPDGFKQFIHALKECGFIDWIVFFSPSGVKSSLQYFGDSNRSGDHLKLAAIG 221 (260)
T ss_pred chhHHHHHHHHhCCceeeEEEEEeeee-cccHHHHHHHHHHhcCCcceEEEECcchHHHHHHHHHHhccchhheeEEEeC
Confidence 566776 7899999988433 444 4444443433344444555555554433333333333333 3344566788
Q ss_pred CCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHh
Q psy8911 242 DEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWAS 278 (280)
Q Consensus 242 D~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ 278 (280)
=+-.+ +-...|+++-.|..--+.+.+..++..|-+
T Consensus 222 PtT~k--aL~~~g~~~~~vs~~P~pe~L~~~I~~~~~ 256 (260)
T KOG4132|consen 222 PTTRK--ALEDLGVKVDVVSPAPDPESLADAIELYQR 256 (260)
T ss_pred cchHH--HHHHcCCCcceecCCCCHHHHHHHHHhhhh
Confidence 77776 666789988888777788999999888754
No 462
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=61.88 E-value=11 Score=32.25 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCC--ccEEEEeCCccc-ccccccCCCeEEE
Q psy8911 70 FANLKKATGIEY--KDMVFFDDEERN-SHDVSPLGVTCIL 106 (280)
Q Consensus 70 ~~~~~~~~g~~p--~~~l~v~D~~~~-i~aa~~~G~~~i~ 106 (280)
|+.-++.+|++| +++-||+|...+ .-+|.-.||.+.+
T Consensus 92 YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWl 131 (293)
T TIGR00388 92 YLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVWL 131 (293)
T ss_pred HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEE
Confidence 999999999988 589999999654 8888889988763
No 463
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=61.85 E-value=18 Score=34.79 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccc
Q psy8911 16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH 95 (280)
Q Consensus 16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~ 95 (280)
++...|...++.+-+++|++-......++.+-+.+++. ++...+.+..+...-..-+++.|+ -++|||... .+
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~~~~-~~ 167 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKANGI----EAVVGAGLI-TD 167 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEEcCchH-HH
Confidence 45556666677777899998766545566666666653 221133334455444455555665 467899655 79
Q ss_pred ccccCCCeEEEEcCC
Q psy8911 96 DVSPLGVTCILVEDG 110 (280)
Q Consensus 96 aa~~~G~~~i~v~~~ 110 (280)
.|.++|++++++.++
T Consensus 168 ~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 168 LAEEAGMTGIFIYSA 182 (538)
T ss_pred HHHHhCCceEEecCH
Confidence 999999999999765
No 464
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=61.65 E-value=13 Score=31.20 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc
Q psy8911 16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ 54 (280)
Q Consensus 16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~ 54 (280)
.+.+.+..|++.|+++..+|++.. ..+..+-+.+++.+
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~-aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTR-AEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchH-HHHHHHHHhcCCCC
Confidence 478899999999999999999999 66667777777654
No 465
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=61.36 E-value=44 Score=32.10 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=55.0
Q ss_pred HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911 170 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHD 249 (280)
Q Consensus 170 ~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~ 249 (280)
+...|..+++.+-+++|++-......++.+-+.+++. +....+...........-+++.|+ -++|||... ...
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~~~~-~~~ 168 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKANGI----EAVVGAGLI-TDL 168 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEEcCchH-HHH
Confidence 5555666777778999999884444555555555554 111112222333344444455666 367899777 589
Q ss_pred ccccCceEEEECCC
Q psy8911 250 VSPLGVTCIHVKKG 263 (280)
Q Consensus 250 a~~aG~~~i~v~~g 263 (280)
|+++|+..+++.++
T Consensus 169 A~~~g~~g~~~~s~ 182 (538)
T PRK15424 169 AEEAGMTGIFIYSA 182 (538)
T ss_pred HHHhCCceEEecCH
Confidence 99999999999754
No 466
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=61.20 E-value=23 Score=27.27 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=28.2
Q ss_pred CCHHHHHHHHhhCCcEEEEEcCCC-cHHHHHHHHhhCCC
Q psy8911 168 RGVPEILRYLKENKCLVAAASRTS-EILHAKQILNLINL 205 (280)
Q Consensus 168 ~g~~~~L~~L~~~g~~~~i~T~~~-~~~~~~~~l~~~gl 205 (280)
....++++.+.+.|.++.|+|.-. .++.++++-..++-
T Consensus 63 ~~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 63 MSRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNA 101 (138)
T ss_pred CCHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCC
Confidence 457889999999999999999763 34466665555543
No 467
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=60.63 E-value=25 Score=30.76 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=0.0
Q ss_pred cCCCHHHHHHHHhhCCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911 166 YYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~ 244 (280)
+.+++.++++.+++.|+ .+.+.||+.........+...|+....- +....+++.|..+...-. +++..
T Consensus 69 l~~~l~~iv~~l~~~g~~~v~i~TNG~ll~~~~~~l~~~g~~~v~i---Sld~~~~~~~~~i~~~~~--------~~~vl 137 (302)
T TIGR02668 69 LRKDLIEIIRRIKDYGIKDVSMTTNGILLEKLAKKLKEAGLDRVNV---SLDTLDPEKYKKITGRGA--------LDRVI 137 (302)
T ss_pred cccCHHHHHHHHHhCCCceEEEEcCchHHHHHHHHHHHCCCCEEEE---EecCCCHHHhhhccCCCc--------HHHHH
Q ss_pred CCcccccccCce----EEEECCCCCHHHHHHHHHHHHh
Q psy8911 245 RNSHDVSPLGVT----CIHVKKGMSHAVLQKGLKQWAS 278 (280)
Q Consensus 245 ~di~~a~~aG~~----~i~v~~g~~~~~~~~~~~~~~~ 278 (280)
..+..++++|+. .+.+..|.+.+++.+.+.-.++
T Consensus 138 ~~i~~~~~~G~~~v~i~~v~~~g~n~~ei~~~~~~~~~ 175 (302)
T TIGR02668 138 EGIESAVDAGLTPVKLNMVVLKGINDNEIPDMVEFAAE 175 (302)
T ss_pred HHHHHHHHcCCCcEEEEEEEeCCCCHHHHHHHHHHHHh
No 468
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=60.57 E-value=26 Score=30.58 Aligned_cols=90 Identities=11% Similarity=0.015 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc-c-------ccccccceecCC------------Ch---hHHH
Q psy8911 15 PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW-N-------QYFDHKQIFPGQ------------KT---THFA 71 (280)
Q Consensus 15 ~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l-~-------~~fd~~~i~~~~------------~~---~~~~ 71 (280)
..+.+-|..|+++|+++.++|++.. ......++..+. . .-++ .+.... +. ..|.
T Consensus 34 ~~l~~~i~~l~~~g~~vilVssGAv-~~G~~~l~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~qa~aa~gq~~L~~~y~ 110 (284)
T cd04256 34 ASIVEQVSELQSQGREVILVTSGAV-AFGKQRLRHEILLSSSMRQTLKSGQ--LKDMPQMELDGRACAAVGQSGLMALYE 110 (284)
T ss_pred HHHHHHHHHHHHCCCEEEEEeeCcH-HhChHHhhhccccccchhhhccccc--ccCCcchhHHHHHHHHcccHHHHHHHH
Confidence 4467778888899999999999988 677776654432 1 1111 111111 11 1289
Q ss_pred HHHHHhCCCCccEEEEeCCcc------c----ccccccCCCeEEEE
Q psy8911 72 NLKKATGIEYKDMVFFDDEER------N----SHDVSPLGVTCILV 107 (280)
Q Consensus 72 ~~~~~~g~~p~~~l~v~D~~~------~----i~aa~~~G~~~i~v 107 (280)
..+..+++.+.+++.-.+... + ++...+.|.-.|.-
T Consensus 111 ~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~ 156 (284)
T cd04256 111 AMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIIN 156 (284)
T ss_pred HHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 999999999999976655222 1 44444677655554
No 469
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=59.91 E-value=7.9 Score=31.11 Aligned_cols=104 Identities=18% Similarity=0.138 Sum_probs=54.8
Q ss_pred cCCCHHHHH---HHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8911 166 YYRGVPEIL---RYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDD 242 (280)
Q Consensus 166 ~~~g~~~~L---~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD 242 (280)
+-....++| ..+++.+-++++++..+.......+-+.+|+.=. .+.-..++-+..++++..-+ .--++||+
T Consensus 59 I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~-----~~~~~~~~e~~~~i~~~~~~-G~~viVGg 132 (176)
T PF06506_consen 59 IPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIK-----IYPYDSEEEIEAAIKQAKAE-GVDVIVGG 132 (176)
T ss_dssp E---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEE-----EEEESSHHHHHHHHHHHHHT-T--EEEES
T ss_pred ECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceE-----EEEECCHHHHHHHHHHHHHc-CCcEEECC
Confidence 334455555 4455667899999887333234555555555311 11112333344444443211 13478999
Q ss_pred CcCCcccccccCceEEEECCCC--CHHHHHHHHHHH
Q psy8911 243 EERNSHDVSPLGVTCIHVKKGM--SHAVLQKGLKQW 276 (280)
Q Consensus 243 ~~~di~~a~~aG~~~i~v~~g~--~~~~~~~~~~~~ 276 (280)
... ...|++.|++++.+..|. -...+.+|+.-.
T Consensus 133 ~~~-~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~ 167 (176)
T PF06506_consen 133 GVV-CRLARKLGLPGVLIESGEESIRRALEEALRIA 167 (176)
T ss_dssp HHH-HHHHHHTTSEEEESS--HHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHH
Confidence 875 689999999999998754 244455555443
No 470
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=58.00 E-value=34 Score=29.31 Aligned_cols=96 Identities=13% Similarity=0.216 Sum_probs=56.6
Q ss_pred CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHh-hcCccccccccceecCCChh------H-----------H
Q psy8911 9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLD-LFNWNQYFDHKQIFPGQKTT------H-----------F 70 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~-~~~l~~~fd~~~i~~~~~~~------~-----------~ 70 (280)
+.+....+..++.+.|.+.+.+..++|.+.. . ...+.. ...-..+|- .+....+.. . +
T Consensus 110 ~~~~~v~~~~eA~~~l~~~~~~~iflttGsk-~-L~~f~~~~~~~~r~~~--RvLp~~~~~~g~~~~~iia~~GPfs~e~ 185 (249)
T PF02571_consen 110 DNWHYVDSYEEAAELLKELGGGRIFLTTGSK-N-LPPFVPAPLPGERLFA--RVLPTPESALGFPPKNIIAMQGPFSKEL 185 (249)
T ss_pred CeEEEeCCHHHHHHHHhhcCCCCEEEeCchh-h-HHHHhhcccCCCEEEE--EECCCccccCCCChhhEEEEeCCCCHHH
Confidence 4588899999999999998866666666666 3 444433 222122332 233322210 0 2
Q ss_pred -HHHHHHhCCCCccEEEEeCC---c--ccccccccCCCeEEEEcCCC
Q psy8911 71 -ANLKKATGIEYKDMVFFDDE---E--RNSHDVSPLGVTCILVEDGM 111 (280)
Q Consensus 71 -~~~~~~~g~~p~~~l~v~D~---~--~~i~aa~~~G~~~i~v~~~~ 111 (280)
..+++.++++ +++-=|| - .-++||+++|+.+|.+..+.
T Consensus 186 n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~ 229 (249)
T PF02571_consen 186 NRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPP 229 (249)
T ss_pred HHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence 2333555654 4444333 1 23899999999999996553
No 471
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=56.44 E-value=47 Score=24.81 Aligned_cols=53 Identities=15% Similarity=0.345 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcCCcccccc--cCceEEEEC-CCCCHHHHHHHHHHHH
Q psy8911 221 THFESLKKATGIEYKDMVFFDDEERNSHDVSP--LGVTCIHVK-KGMSHAVLQKGLKQWA 277 (280)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~--aG~~~i~v~-~g~~~~~~~~~~~~~~ 277 (280)
..+...++..+++ ++++++. .++-.|-. .+..++++. .|+....++.-...++
T Consensus 59 ~~i~~lc~~~~Ip---~~~~~sk-~eLG~a~Gk~~~~svvaI~d~g~a~~~~~~~~~~i~ 114 (117)
T TIGR03677 59 AHLPALCEEKGIP---YVYVKKK-EDLGAAAGLEVGAASAAIVDEGKAEELLKEIIEKVE 114 (117)
T ss_pred HHHHHHHHHcCCC---EEEeCCH-HHHHHHhCCCCCeEEEEEEchhhhHHHHHHHHHHHH
Confidence 5678888888887 7777755 33333322 345677776 4666666655544443
No 472
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=56.14 E-value=93 Score=25.92 Aligned_cols=97 Identities=9% Similarity=-0.035 Sum_probs=51.9
Q ss_pred HHHHhhCCcEE-EEEcCC-----------CcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911 174 LRYLKENKCLV-AAASRT-----------SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD 241 (280)
Q Consensus 174 L~~L~~~g~~~-~i~T~~-----------~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig 241 (280)
+..++++|+.+ +++|-. ...+.++...+.+|+..+.-.+........+.+..++.+..-.--+.+.+|
T Consensus 14 l~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~~~l~~~l~~~~~~g~~~vv~G 93 (218)
T TIGR03679 14 LYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEVEDLKGALKELKREGVEGIVTG 93 (218)
T ss_pred HHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 34566788876 354511 134566777788888644321100001111224333333311134688899
Q ss_pred CCcCCccc------ccccCceEEEECCCCCHHHHH
Q psy8911 242 DEERNSHD------VSPLGVTCIHVKKGMSHAVLQ 270 (280)
Q Consensus 242 D~~~di~~------a~~aG~~~i~v~~g~~~~~~~ 270 (280)
|...+.+. +..+|+.++.--|+.+..++-
T Consensus 94 ~i~sd~~~~~~e~v~~~~gl~~~~PLw~~~~~el~ 128 (218)
T TIGR03679 94 AIASRYQKSRIERICEELGLKVFAPLWGRDQEEYL 128 (218)
T ss_pred CcccHhHHHHHHHHHHhCCCeEEeehhcCCHHHHH
Confidence 98876432 234788877777888776654
No 473
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=55.35 E-value=28 Score=31.57 Aligned_cols=102 Identities=9% Similarity=0.013 Sum_probs=0.0
Q ss_pred cCCCHHHHHHHHhhCCcEEEEEcCCCc--HHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8911 166 YYRGVPEILRYLKENKCLVAAASRTSE--ILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDE 243 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~--~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~ 243 (280)
+.|+..++++.+++.|+.+.+.||+ . ....-..|...|+....- +..+..++.+..+...-| -++..
T Consensus 75 l~~~~~~il~~~~~~g~~~~i~TNG-~ll~~~~~~~L~~~g~~~v~i---Sldg~~~e~~d~irg~~g-------~f~~~ 143 (378)
T PRK05301 75 LRKDLEELVAHARELGLYTNLITSG-VGLTEARLAALKDAGLDHIQL---SFQDSDPELNDRLAGTKG-------AFAKK 143 (378)
T ss_pred CchhHHHHHHHHHHcCCcEEEECCC-ccCCHHHHHHHHHcCCCEEEE---EecCCCHHHHHHHcCCCc-------hHHHH
Q ss_pred cCCcccccccCceEEEEC--CCCCHHHHHHHHHHHHh
Q psy8911 244 ERNSHDVSPLGVTCIHVK--KGMSHAVLQKGLKQWAS 278 (280)
Q Consensus 244 ~~di~~a~~aG~~~i~v~--~g~~~~~~~~~~~~~~~ 278 (280)
...+..+++.|+.+.... ...+..++.+.+.-..+
T Consensus 144 ~~~i~~l~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~ 180 (378)
T PRK05301 144 LAVARLVKAHGYPLTLNAVIHRHNIDQIPRIIELAVE 180 (378)
T ss_pred HHHHHHHHHCCCceEEEEEeecCCHHHHHHHHHHHHH
No 474
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=54.55 E-value=64 Score=27.73 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=49.7
Q ss_pred CcceecCCHHHHHHHHHH---CCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEE
Q psy8911 9 AHIKYYPDVPGILKYLKQ---NNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMV 85 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~---~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l 85 (280)
+.+...++..+..+.+.+ .+-++.+.|.+.. ...+.....-...|- .+.... ..+. .+..+|++|++++
T Consensus 107 ~~~~~v~~~~ea~~~~~~~~~~~~~i~lttG~k~---l~~f~~~~~~~~~~~--RvLP~~--~~l~-~~~~~G~~~~~ii 178 (256)
T TIGR00715 107 KNIIEVPDIEEATRVAYQPYLRGKRVFLTAGASW---LSHFSLSQDEAVVFV--RVLPYP--QALA-QALKLGFPSDRII 178 (256)
T ss_pred CCeEEeCCHHHHHHHhhhccccCCcEEEecCcch---HHHHhhccCCceEEE--EECCCc--hhhH-HHHHcCCChhcEE
Confidence 345667788898888877 4445555555544 333333211111222 233222 1222 5566666666665
Q ss_pred EE--------------------------eCC---cccccccccCCCeEEEEcCC
Q psy8911 86 FF--------------------------DDE---ERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 86 ~v--------------------------~D~---~~~i~aa~~~G~~~i~v~~~ 110 (280)
.. |++ ..=++||+++|+.+|.+..+
T Consensus 179 a~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP 232 (256)
T TIGR00715 179 AMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARP 232 (256)
T ss_pred EEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCC
Confidence 54 332 23367777777777777443
No 475
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=54.24 E-value=61 Score=26.73 Aligned_cols=90 Identities=18% Similarity=0.144 Sum_probs=52.0
Q ss_pred HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh-CCCccccccceEecCC--CHHHHHHHHHHcCCCC--CcEEEEeCCc
Q psy8911 170 VPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEIYPGP--KTTHFESLKKATGIEY--KDMVFFDDEE 244 (280)
Q Consensus 170 ~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~--k~~~~~~~~~~~~~~~--~~~l~igD~~ 244 (280)
+..+++.|+++ |+++|+||--....-...+++ .|.. .-.+.++... +..+...+++++.... -+.+||+..=
T Consensus 30 ie~~~~~L~~~-~~~aVI~~Di~t~~Da~~l~~~~g~~--i~~v~TG~~CH~da~m~~~ai~~l~~~~~~~Dll~iEs~G 106 (202)
T COG0378 30 IEKTLRALKDE-YKIAVITGDIYTKEDADRLRKLPGEP--IIGVETGKGCHLDASMNLEAIEELVLDFPDLDLLFIESVG 106 (202)
T ss_pred HHHHHHHHHhh-CCeEEEeceeechhhHHHHHhCCCCe--eEEeccCCccCCcHHHHHHHHHHHhhcCCcCCEEEEecCc
Confidence 45667888888 999999998222233345555 3322 2222333222 5566778888876543 5999998766
Q ss_pred CCccccc------ccCceEEEECCC
Q psy8911 245 RNSHDVS------PLGVTCIHVKKG 263 (280)
Q Consensus 245 ~di~~a~------~aG~~~i~v~~g 263 (280)
++.+-- .+++..+-|+.|
T Consensus 107 -NL~~~~sp~L~d~~~v~VidvteG 130 (202)
T COG0378 107 -NLVCPFSPDLGDHLRVVVIDVTEG 130 (202)
T ss_pred -ceecccCcchhhceEEEEEECCCC
Confidence 332221 244555555555
No 476
>PRK00973 glucose-6-phosphate isomerase; Provisional
Probab=53.86 E-value=1.3e+02 Score=28.22 Aligned_cols=81 Identities=17% Similarity=0.247 Sum_probs=50.1
Q ss_pred cEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHH---H---HHHHHHcCC-CCCcEEEEeCCcCC-c-ccccc
Q psy8911 182 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTH---F---ESLKKATGI-EYKDMVFFDDEERN-S-HDVSP 252 (280)
Q Consensus 182 ~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~---~---~~~~~~~~~-~~~~~l~igD~~~d-i-~~a~~ 252 (280)
.++.++.|- .+.....+++.++..+..-.+++.++.-.+. | ..+++++|. ...+++.|-|...+ + .-|++
T Consensus 109 ~~l~~~~n~-dp~~~~~~l~~l~~~~Tl~iviSKSGtT~ET~~~f~~~~~~l~~~g~~~~~~~vaiTd~~~g~L~~~A~~ 187 (446)
T PRK00973 109 PRVFVLDNV-DPEKTASILDVIDLEKTLFNVISKSGNTAETLANYLIIRGILEKLGLDPKKHLVFTTDPEKGKLKKIAEK 187 (446)
T ss_pred ceEEEeCCC-CHHHHHHHHHhCCcccEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCccccceEEEEcCCCccchHHHHHH
Confidence 457788888 7888888898887766443334444433322 3 333444442 23468888884332 2 34677
Q ss_pred cCceEEEECCC
Q psy8911 253 LGVTCIHVKKG 263 (280)
Q Consensus 253 aG~~~i~v~~g 263 (280)
-|++++.++.+
T Consensus 188 ~g~~~f~ip~~ 198 (446)
T PRK00973 188 EGYRTLEIPEN 198 (446)
T ss_pred cCCcEEeeCCC
Confidence 88888888754
No 477
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=53.66 E-value=66 Score=28.70 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=56.5
Q ss_pred HHHHHHHHHHC-Cce-EEEecCCCchHHHHHHHhhcCccccccccceecC--CCh-hH-------HHHHHHHhCCCCccE
Q psy8911 17 VPGILKYLKQN-NCL-VAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--QKT-TH-------FANLKKATGIEYKDM 84 (280)
Q Consensus 17 ~~~~l~~L~~~-g~~-~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--~~~-~~-------~~~~~~~~g~~p~~~ 84 (280)
+..+++.|++. ++. ..++|..+. ...+.+++.+++..-++ ..+.+ ... .. +..++++ ..|+=+
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~-~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDiv 90 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHR-EMLDQVLDLFHLPPDYD--LNIMSPGQTLGEITSNMLEGLEELLLE--EKPDIV 90 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCH-HHHHHHHHhcCCCCCee--eecCCCCCCHHHHHHHHHHHHHHHHHH--cCCCEE
Confidence 56788999986 444 367777777 78888888888864343 22222 111 11 3333333 457777
Q ss_pred EEEeCCcc---cccccccCCCeEEEEcCC
Q psy8911 85 VFFDDEER---NSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 85 l~v~D~~~---~i~aa~~~G~~~i~v~~~ 110 (280)
+..||+.. ...+|+..|+..+++..+
T Consensus 91 ~~~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 91 LVQGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred EEeCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 77789754 456777799999987543
No 478
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=52.95 E-value=55 Score=28.09 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=58.8
Q ss_pred CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChh------------------H
Q psy8911 8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTT------------------H 69 (280)
Q Consensus 8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~------------------~ 69 (280)
...+...++..|+.+.+++.|-++.+.|.... ...+.+......++- .++...++. .
T Consensus 108 gd~~~~V~d~~ea~~~~~~~~~rVflt~G~~~---l~~f~~~~~~~~~~~--Rvlp~~~~~~~~~~~~~p~~~Iia~~GP 182 (257)
T COG2099 108 GDNWIEVADIEEAAEAAKQLGRRVFLTTGRQN---LAHFVAADAHSHVLA--RVLPPPDVLAKCEDLGVPPARIIAMRGP 182 (257)
T ss_pred CCceEEecCHHHHHHHHhccCCcEEEecCccc---hHHHhcCcccceEEE--EEcCchHHHHHHHhcCCChhhEEEecCC
Confidence 45567788999999999999866666665555 556666666555555 444433220 0
Q ss_pred HH-----HHHHHhCCCCccEEEEeCC------cccccccccCCCeEEEEcCC
Q psy8911 70 FA-----NLKKATGIEYKDMVFFDDE------ERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 70 ~~-----~~~~~~g~~p~~~l~v~D~------~~~i~aa~~~G~~~i~v~~~ 110 (280)
|- ..+++.+++ +|+-=|| +.-+++|.++|+.+|.+..+
T Consensus 183 fs~~~n~all~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 183 FSEEDNKALLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred cChHHHHHHHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 11 222334432 4444343 23489999999999999554
No 479
>KOG0204|consensus
Probab=52.58 E-value=70 Score=32.46 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=37.7
Q ss_pred eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911 12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN 53 (280)
Q Consensus 12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~ 53 (280)
+..||+.+.++.++++|+++-.+|...- ..++.+-...|+.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI-~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNI-NTAKAIARECGIL 687 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcH-HHHHHHHHHcccc
Confidence 5689999999999999999999999998 8899988888875
No 480
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=52.58 E-value=61 Score=33.78 Aligned_cols=45 Identities=18% Similarity=0.329 Sum_probs=32.5
Q ss_pred CCChhHHHHHHHHhCCCCccE-EEEeCCcc-cccccccCCCe-EEEEcC
Q psy8911 64 GQKTTHFANLKKATGIEYKDM-VFFDDEER-NSHDVSPLGVT-CILVED 109 (280)
Q Consensus 64 ~~~~~~~~~~~~~~g~~p~~~-l~v~D~~~-~i~aa~~~G~~-~i~v~~ 109 (280)
.++....++++.+.|++.+++ ||+|||-+ |.+.- -.|.+ +|.+.+
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi~~g 1002 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVILKG 1002 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEEEec
Confidence 355566999999999999999 55999998 85544 33444 454444
No 481
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=52.49 E-value=12 Score=37.35 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccC--ceEEEECC
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLG--VTCIHVKK 262 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG--~~~i~v~~ 262 (280)
.|......+++ +++++.+++|||+.+|+..-+.++ ..++.|.+
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~ 701 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP 701 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC
Confidence 55577788887 789999999999999988888763 34455543
No 482
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=52.46 E-value=20 Score=30.01 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=26.5
Q ss_pred HHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD 57 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd 57 (280)
|.++|..|+++ +.++|+|.+.- ...+.-+....+...||
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~-~k~~eQl~~~~~~~~fd 39 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDL-PKIQEQLGGDDVLDNFD 39 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-H-HHHHHHHSTTTHHHH-S
T ss_pred CHHHHHHHHhc-CeEEEEcchhH-HHHHHHHcccchHhhCC
Confidence 57899999975 99999999999 44444443334456677
No 483
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=51.59 E-value=21 Score=27.87 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=22.5
Q ss_pred cCCCHHHHHHHHhhCCcEEEEEcCC
Q psy8911 166 YYRGVPEILRYLKENKCLVAAASRT 190 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i~T~~ 190 (280)
..+.+.++++.++++|+++.+-||.
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~ 97 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGL 97 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC
Confidence 3467999999999999999999998
No 484
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=51.34 E-value=37 Score=29.69 Aligned_cols=53 Identities=21% Similarity=0.324 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccc------cCceEEEECCCCCHHHHHH
Q psy8911 218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP------LGVTCIHVKKGMSHAVLQK 271 (280)
Q Consensus 218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~------aG~~~i~v~~g~~~~~~~~ 271 (280)
|.++.|.+++.++|+..+..|++=|...+..+++. +|.+-|.|-+| ..+.|+.
T Consensus 73 p~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdG-G~~~W~~ 131 (285)
T COG2897 73 PSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDG-GLPAWKA 131 (285)
T ss_pred CCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecC-CHHHHHH
Confidence 56788999999999999999999777888888887 79988888776 5555553
No 485
>KOG2116|consensus
Probab=50.87 E-value=20 Score=34.87 Aligned_cols=119 Identities=18% Similarity=0.136 Sum_probs=69.2
Q ss_pred eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH---HHHHHHhhC
Q psy8911 127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL---HAKQILNLI 203 (280)
Q Consensus 127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~---~~~~~l~~~ 203 (280)
+.++-|.|||+.-+....++ +-..+..+ ...||..+-...+++||++.-+|.. ... ..+..|+.+
T Consensus 531 kIVISDIDGTITKSDvLGh~----------lp~iGkDW-Th~GVAkLyt~Ik~NGYk~lyLSAR-aIgQA~~TR~yL~nv 598 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDVLGHV----------LPMIGKDW-THTGVAKLYTKIKENGYKILYLSAR-AIGQADSTRQYLKNV 598 (738)
T ss_pred cEEEecCCCceEhhhhhhhh----------hhhhcCcc-hhhhHHHHHHHHHhCCeeEEEEehh-hhhhhHHHHHHHHHH
Confidence 56788999998765444332 11112222 3479999999999999999999997 543 334555554
Q ss_pred CCcccc--ccc-eEecC------------CCHHHH-----HHHHHHcCCCCCcE--EEEeCCcCCcccccccCceEE
Q psy8911 204 NLNQYF--SNK-EIYPG------------PKTTHF-----ESLKKATGIEYKDM--VFFDDEERNSHDVSPLGVTCI 258 (280)
Q Consensus 204 gl~~~f--~~~-~~~~~------------~k~~~~-----~~~~~~~~~~~~~~--l~igD~~~di~~a~~aG~~~i 258 (280)
.=+.+- ++. .+.++ -+|+-| ..+.+.+. +-.+- .-||+.+.|..+=++.|++..
T Consensus 599 ~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP~~ 674 (738)
T KOG2116|consen 599 EQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNLFP-PSGNPFYAGFGNRITDVISYRQVGVPLS 674 (738)
T ss_pred hhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHhcC-CCCCceeeecCCCcccceeeeeecCCcc
Confidence 333221 221 22221 233333 22222223 22232 247999999999999987543
No 486
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=50.39 E-value=29 Score=24.12 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=28.3
Q ss_pred HHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD 57 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd 57 (280)
..++.+.++++|..+.+..-++ ..+.+++..|+.++|.
T Consensus 59 L~~l~~~~~~~g~~v~i~~~~~---~~~~~l~~~gl~~~~~ 96 (99)
T cd07043 59 LLGAYKRARAAGGRLVLVNVSP---AVRRVLELTGLDRLFP 96 (99)
T ss_pred HHHHHHHHHHcCCeEEEEcCCH---HHHHHHHHhCcceeee
Confidence 4567777888898877765443 3788999999887776
No 487
>TIGR02666 moaA molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine.
Probab=50.21 E-value=29 Score=30.92 Aligned_cols=103 Identities=9% Similarity=0.084 Sum_probs=0.0
Q ss_pred cCCCHHHHHHHHhh-CCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8911 166 YYRGVPEILRYLKE-NKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDE 243 (280)
Q Consensus 166 ~~~g~~~~L~~L~~-~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~ 243 (280)
+.+++.++++.+++ .|+ .+.+.||+......-..|...|++..-- +....+++.|..+-..-+ -+...
T Consensus 72 l~~~l~~li~~i~~~~gi~~v~itTNG~ll~~~~~~L~~~gl~~v~I---Sld~~~~~~~~~i~~~~~-------~~~~v 141 (334)
T TIGR02666 72 LRKDLVELVARLAALPGIEDIALTTNGLLLARHAKDLKEAGLKRVNV---SLDSLDPERFAKITRRGG-------RLEQV 141 (334)
T ss_pred ccCCHHHHHHHHHhcCCCCeEEEEeCchhHHHHHHHHHHcCCCeEEE---ecccCCHHHhheeCCCCC-------CHHHH
Q ss_pred cCCcccccccCceEEEEC----CCCCHHHHHHHHHHHHh
Q psy8911 244 ERNSHDVSPLGVTCIHVK----KGMSHAVLQKGLKQWAS 278 (280)
Q Consensus 244 ~~di~~a~~aG~~~i~v~----~g~~~~~~~~~~~~~~~ 278 (280)
...+..++++|+..+.+. .|.+.+++.+.+.-.++
T Consensus 142 l~~i~~l~~~G~~~v~in~vv~~g~n~~ei~~l~~~~~~ 180 (334)
T TIGR02666 142 LAGIDAALAAGLEPVKLNTVVMRGVNDDEIVDLAEFAKE 180 (334)
T ss_pred HHHHHHHHHcCCCcEEEEEEEeCCCCHHHHHHHHHHHHh
No 488
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=50.13 E-value=65 Score=28.91 Aligned_cols=85 Identities=19% Similarity=0.217 Sum_probs=54.0
Q ss_pred HHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC--CChhH----------HHHHHHHhCCCCccE
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--QKTTH----------FANLKKATGIEYKDM 84 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--~~~~~----------~~~~~~~~g~~p~~~ 84 (280)
-+.++++|+++|+.+.|.+-... .+..+|+.+|+ ++..+... ...+. +..+.+ ...|+ +
T Consensus 16 Fk~~I~eL~~~GheV~it~R~~~--~~~~LL~~yg~----~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~--~~~pD-v 86 (335)
T PF04007_consen 16 FKNIIRELEKRGHEVLITARDKD--ETEELLDLYGI----DYIVIGKHGDSLYGKLLESIERQYKLLKLIK--KFKPD-V 86 (335)
T ss_pred HHHHHHHHHhCCCEEEEEEeccc--hHHHHHHHcCC----CeEEEcCCCCCHHHHHHHHHHHHHHHHHHHH--hhCCC-E
Confidence 36788999999999999888766 57889998885 42222221 12222 111222 24554 3
Q ss_pred EEEeCCcccccccccCCCeEEEEcCC
Q psy8911 85 VFFDDEERNSHDVSPLGVTCILVEDG 110 (280)
Q Consensus 85 l~v~D~~~~i~aa~~~G~~~i~v~~~ 110 (280)
++-.-|+.-..+|.-+|..+|.+.+.
T Consensus 87 ~is~~s~~a~~va~~lgiP~I~f~D~ 112 (335)
T PF04007_consen 87 AISFGSPEAARVAFGLGIPSIVFNDT 112 (335)
T ss_pred EEecCcHHHHHHHHHhCCCeEEEecC
Confidence 33344455566888899999999775
No 489
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=49.82 E-value=27 Score=30.95 Aligned_cols=23 Identities=26% Similarity=0.167 Sum_probs=21.0
Q ss_pred HHHHHHHHHHCCceEEEecCCCc
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSE 39 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~ 39 (280)
+..+.+.|+++|++.+|+|-+..
T Consensus 47 v~~La~~l~~~G~~~~IlSRGYg 69 (311)
T TIGR00682 47 VVWLAELLKDRGLRVGVLSRGYG 69 (311)
T ss_pred HHHHHHHHHHCCCEEEEECCCCC
Confidence 67889999999999999998877
No 490
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=49.55 E-value=31 Score=24.72 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=29.9
Q ss_pred HHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc
Q psy8911 17 VPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD 57 (280)
Q Consensus 17 ~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd 57 (280)
+..+.+.++++|.++.++.-++. .+..++..|+.+.|.
T Consensus 60 L~~~~~~~~~~g~~l~l~~~~~~---v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 60 ILGRYKKIKNEGGEVIVCNVSPA---VKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhCCceEEE
Confidence 34678889999999998765554 688889999888775
No 491
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=49.37 E-value=29 Score=32.00 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=27.6
Q ss_pred CCCcceecCCHHHHHHHHHHCCceEEEe-cCCC
Q psy8911 7 RGAHIKYYPDVPGILKYLKQNNCLVAAA-SRTS 38 (280)
Q Consensus 7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~-Sn~~ 38 (280)
.+.....+|.+.++|+.+++.|++++|. ||+.
T Consensus 81 GGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~ 113 (404)
T TIGR03278 81 GGGDVSCYPELEELTKGLSDLGLPIHLGYTSGK 113 (404)
T ss_pred CCcccccCHHHHHHHHHHHhCCCCEEEeCCCCc
Confidence 4556677899999999999999999996 9965
No 492
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=49.20 E-value=86 Score=27.95 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=55.1
Q ss_pred HHHHHHHHhhC-Cc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCC-HH-------HHHHHHHHcCCCCCcEEE
Q psy8911 170 VPEILRYLKEN-KC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPK-TT-------HFESLKKATGIEYKDMVF 239 (280)
Q Consensus 170 ~~~~L~~L~~~-g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k-~~-------~~~~~~~~~~~~~~~~l~ 239 (280)
...+++.|++. ++ ...|+|+. .......+++.+++..-++.....++.. .. .+..++++ .+|+=++.
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~-h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDiv~~ 92 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQ-HREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLE--EKPDIVLV 92 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCC-CHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHH--cCCCEEEE
Confidence 45677888875 33 35777877 6777888888899874343211111111 11 13444444 45766667
Q ss_pred EeCCcCCc---ccccccCceEEEECCC
Q psy8911 240 FDDEERNS---HDVSPLGVTCIHVKKG 263 (280)
Q Consensus 240 igD~~~di---~~a~~aG~~~i~v~~g 263 (280)
.||+...+ .+|+..|++.+++..|
T Consensus 93 ~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 93 QGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred eCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 79976543 4556689999988544
No 493
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=49.00 E-value=31 Score=29.34 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=10.4
Q ss_pred cCCCHHHHHHHHhhCCcEEEE
Q psy8911 166 YYRGVPEILRYLKENKCLVAA 186 (280)
Q Consensus 166 ~~~g~~~~L~~L~~~g~~~~i 186 (280)
+-+...++.+.|++.|.....
T Consensus 11 p~~~~~~l~~~l~~~G~~~~~ 31 (255)
T PRK05752 11 PAEECAALAASLAEAGIFSSS 31 (255)
T ss_pred cHHHHHHHHHHHHHcCCCEEE
Confidence 334445555555555544443
No 494
>cd05015 SIS_PGI_1 Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the first SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate. As an extracellular protein, PGI also has functions equivalent to neuroleukin (NLK), autocrine motility factor (AMF), and maturation factor (MF). Evidence suggests that PGI, NLK, AMF, and MF are closely related or identical. NLK is a neurotrophic growth factor that promotes regeneration and survival of neurons. The dimeric form of NLK has isomerase function, whereas its monomeric form carries out neurotrophic activity. AMF is a cytokine that stimulates cell migration and metastasis. MF mediates the differentiation of human myeloid leukemic HL-60 cells to terminal monocytic cells.
Probab=48.73 E-value=1.3e+02 Score=23.53 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=10.1
Q ss_pred CceEEEecCCCchHHHHHHHhhc
Q psy8911 28 NCLVAAASRTSEIQGAQQLLDLF 50 (280)
Q Consensus 28 g~~~~i~Sn~~~~~~~~~~l~~~ 50 (280)
+.++.+++|... ......+..+
T Consensus 49 ~~~i~~~~~~D~-~~~~~~~~~~ 70 (158)
T cd05015 49 GLRLHFVSNVDP-DDLAELLKKL 70 (158)
T ss_pred CceEEEEeCCCH-HHHHHHHHhC
Confidence 444555555544 3434444443
No 495
>KOG2832|consensus
Probab=48.18 E-value=37 Score=30.65 Aligned_cols=77 Identities=19% Similarity=0.224 Sum_probs=56.1
Q ss_pred ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---ChhHHHHHHHHhCCCCccEEEE
Q psy8911 11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ---KTTHFANLKKATGIEYKDMVFF 87 (280)
Q Consensus 11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~---~~~~~~~~~~~~g~~p~~~l~v 87 (280)
+.-.||+--+|.+|. +.|.+.+.|+... -.+..+++.++-.+|..+. .+.+. ..++-.+=+..++-+++.+|+|
T Consensus 213 f~kRPgvD~FL~~~a-~~yEIVi~sse~g-mt~~pl~d~lDP~g~IsYk-Lfr~~t~y~~G~HvKdls~LNRdl~kVivV 289 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLA-KYYEIVVYSSEQG-MTVFPLLDALDPKGYISYK-LFRGATKYEEGHHVKDLSKLNRDLQKVIVV 289 (393)
T ss_pred eccCchHHHHHHhhc-ccceEEEEecCCc-cchhhhHhhcCCcceEEEE-EecCcccccCccchhhhhhhccccceeEEE
Confidence 456899999999999 6799999999999 7778889988766666642 22222 1222233366788999999998
Q ss_pred eCC
Q psy8911 88 DDE 90 (280)
Q Consensus 88 ~D~ 90 (280)
+=.
T Consensus 290 d~d 292 (393)
T KOG2832|consen 290 DFD 292 (393)
T ss_pred Ecc
Confidence 753
No 496
>PLN02334 ribulose-phosphate 3-epimerase
Probab=47.58 E-value=1.3e+02 Score=25.08 Aligned_cols=91 Identities=10% Similarity=0.114 Sum_probs=52.4
Q ss_pred CHHHHHHHHhhCCcEEEEEcCCC-cHHHHHHHHhhCCCccccccceEecC---CC--HHH---HHHHHHHcCCCCCcEEE
Q psy8911 169 GVPEILRYLKENKCLVAAASRTS-EILHAKQILNLINLNQYFSNKEIYPG---PK--TTH---FESLKKATGIEYKDMVF 239 (280)
Q Consensus 169 g~~~~L~~L~~~g~~~~i~T~~~-~~~~~~~~l~~~gl~~~f~~~~~~~~---~k--~~~---~~~~~~~~~~~~~~~l~ 239 (280)
...+.++.+++.|.++++..|.. ..+.++..++. +-.+|+-...+.++ ++ +.. +.++.+.. ..-.+..
T Consensus 103 ~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~-~~~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~--~~~~I~a 179 (229)
T PLN02334 103 HLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEK-GLVDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKY--PELDIEV 179 (229)
T ss_pred hHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhc-cCCCEEEEEEEecCCCccccCHHHHHHHHHHHHhC--CCCcEEE
Confidence 35688899999999999999841 33334333322 11455543333322 21 222 33333221 1124556
Q ss_pred E-eCCcCCcccccccCceEEEECC
Q psy8911 240 F-DDEERNSHDVSPLGVTCIHVKK 262 (280)
Q Consensus 240 i-gD~~~di~~a~~aG~~~i~v~~ 262 (280)
+ |=+..++....++|+..+.+-.
T Consensus 180 ~GGI~~e~i~~l~~aGad~vvvgs 203 (229)
T PLN02334 180 DGGVGPSTIDKAAEAGANVIVAGS 203 (229)
T ss_pred eCCCCHHHHHHHHHcCCCEEEECh
Confidence 6 5666788888899999988864
No 497
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=47.55 E-value=1.3e+02 Score=27.41 Aligned_cols=43 Identities=9% Similarity=0.078 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc--Cccccccc
Q psy8911 16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF--NWNQYFDH 58 (280)
Q Consensus 16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~--~l~~~fd~ 58 (280)
+..++++.|+++|+.+.+-=+....+.+...++.= .++++|..
T Consensus 176 ~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~~Ga~~~THlfNa 220 (382)
T PRK11170 176 VDAEVIRKLVEAGIVVSAGHSNATYEEAKAGFRAGITFATHLYNA 220 (382)
T ss_pred CcHHHHHHHHHCCcEEEeeCCcCCHHHHHHHHHcCCCEEeecccc
Confidence 34599999999999998775544325555544431 24566663
No 498
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=47.25 E-value=49 Score=28.91 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=51.0
Q ss_pred cCCHHHHHHHHHHCCce--EEEecCCCchHHHHHHHhhcCccccccccceecCCC---hhHHHHHHHHhCCCCccEEEEe
Q psy8911 14 YPDVPGILKYLKQNNCL--VAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK---TTHFANLKKATGIEYKDMVFFD 88 (280)
Q Consensus 14 ~~g~~~~l~~L~~~g~~--~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~---~~~~~~~~~~~g~~p~~~l~v~ 88 (280)
.++..++++.|+++ ++ .+..+|.-......+.-.-..+..-.|.+.|+++.. ...+..++++.|. .+..|+
T Consensus 170 ~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~nRQ~Avk~la~~~Dl~iVVG~~nSSNs~rL~eiA~~~g~---~aylId 245 (294)
T COG0761 170 VDDTAEIVAALKER-FPKIEVPPFNDICYATQNRQDAVKELAPEVDLVIVVGSKNSSNSNRLAEIAKRHGK---PAYLID 245 (294)
T ss_pred HHHHHHHHHHHHHh-CccccCCcccccchhhhhHHHHHHHHhhcCCEEEEECCCCCccHHHHHHHHHHhCC---CeEEeC
Confidence 34667777777766 55 233333211011111111111222344333444432 3348888888887 344455
Q ss_pred CCcccccccccCCCeEEEEcCCCchhh
Q psy8911 89 DEERNSHDVSPLGVTCILVEDGMTNAI 115 (280)
Q Consensus 89 D~~~~i~aa~~~G~~~i~v~~~~~~~~ 115 (280)
+ ..++....=.|..+|+++.|.+..+
T Consensus 246 ~-~~ei~~~w~~~~~~VGvTAGAStPd 271 (294)
T COG0761 246 D-AEEIDPEWLKGVKTVGVTAGASTPD 271 (294)
T ss_pred C-hHhCCHHHhcCccEEEEecCCCCCH
Confidence 4 6778877778888888887765433
No 499
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=47.08 E-value=27 Score=31.83 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=48.4
Q ss_pred CcceecCCHHHHHHHHHHC-Cce-EEEecCCCch-HHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEE
Q psy8911 9 AHIKYYPDVPGILKYLKQN-NCL-VAAASRTSEI-QGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMV 85 (280)
Q Consensus 9 ~~~~~~~g~~~~l~~L~~~-g~~-~~i~Sn~~~~-~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l 85 (280)
.+..++|++.++++.+++. |+. +.+.||+... +.+ ..+...|+... . .-+.+.+...|..+...-+
T Consensus 115 GEPllr~dl~eli~~l~~~~gi~~i~itTNG~lL~~~~-~~L~~aGld~V-n--ISLDsl~~e~~~~itr~~~------- 183 (373)
T PLN02951 115 GEPTLRKDIEDICLQLSSLKGLKTLAMTTNGITLSRKL-PRLKEAGLTSL-N--ISLDTLVPAKFEFLTRRKG------- 183 (373)
T ss_pred CCCcchhhHHHHHHHHHhcCCCceEEEeeCcchHHHHH-HHHHhCCCCeE-E--EeeccCCHHHHHHHhcCCC-------
Confidence 4566788999999999986 885 8899999651 222 22333454221 1 0112333444665543211
Q ss_pred EEeCCcccccccccCCCe
Q psy8911 86 FFDDEERNSHDVSPLGVT 103 (280)
Q Consensus 86 ~v~D~~~~i~aa~~~G~~ 103 (280)
++.-..+++.|+++|+.
T Consensus 184 -~~~vl~~I~~a~~~G~~ 200 (373)
T PLN02951 184 -HDRVLESIDTAIELGYN 200 (373)
T ss_pred -HHHHHHHHHHHHHcCCC
Confidence 13445678888888874
No 500
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=46.99 E-value=17 Score=30.78 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=24.8
Q ss_pred ccCCCHHHHHHHHhhCCcEEEEEcCCCcH
Q psy8911 165 KYYRGVPEILRYLKENKCLVAAASRTSEI 193 (280)
Q Consensus 165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~ 193 (280)
-+.++..++++.|++.|+++.|-||+ ..
T Consensus 84 ll~~~l~~li~~l~~~g~~v~leTNG-tl 111 (238)
T TIGR03365 84 ALQKPLGELIDLGKAKGYRFALETQG-SV 111 (238)
T ss_pred hhhHhHHHHHHHHHHCCCCEEEECCC-CC
Confidence 35689999999999999999999999 43
Done!