Query psy8912
Match_columns 538
No_of_seqs 452 out of 3071
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 22:40:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8912.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8912hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12689 Acid_PPase: Acid Phos 100.0 2.4E-30 5.1E-35 244.6 12.8 152 382-537 1-169 (169)
2 TIGR01685 MDP-1 magnesium-depe 99.9 1.1E-23 2.4E-28 200.5 12.7 152 383-536 1-174 (174)
3 PLN02919 haloacid dehalogenase 99.9 7.8E-22 1.7E-26 232.4 16.8 167 55-226 161-337 (1057)
4 PF12689 Acid_PPase: Acid Phos 99.8 2.9E-21 6.2E-26 182.9 9.3 150 15-164 2-164 (169)
5 PLN02770 haloacid dehalogenase 99.8 4.2E-20 9.1E-25 185.0 16.3 121 52-177 105-230 (248)
6 PRK13288 pyrophosphatase PpaX; 99.8 4E-20 8.8E-25 180.1 14.7 121 52-176 79-204 (214)
7 TIGR01685 MDP-1 magnesium-depe 99.8 1E-20 2.3E-25 180.2 8.9 147 15-162 1-168 (174)
8 COG4996 Predicted phosphatase 99.8 3E-20 6.6E-25 165.5 10.0 140 385-529 1-153 (164)
9 PRK13226 phosphoglycolate phos 99.8 7.7E-20 1.7E-24 180.8 13.5 122 52-176 92-218 (229)
10 COG0546 Gph Predicted phosphat 99.8 2E-19 4.2E-24 177.1 15.3 120 54-177 88-212 (220)
11 TIGR01422 phosphonatase phosph 99.8 2E-19 4.4E-24 179.9 14.4 125 52-177 96-247 (253)
12 TIGR02253 CTE7 HAD superfamily 99.8 3.2E-19 6.9E-24 173.9 14.9 121 52-175 91-217 (221)
13 PRK13225 phosphoglycolate phos 99.8 3E-19 6.5E-24 181.8 14.9 121 51-175 138-260 (273)
14 COG0637 Predicted phosphatase/ 99.8 1.7E-19 3.6E-24 178.1 12.1 104 51-155 82-190 (221)
15 TIGR01454 AHBA_synth_RP 3-amin 99.8 3.4E-19 7.3E-24 172.4 13.9 121 52-176 72-197 (205)
16 PLN03243 haloacid dehalogenase 99.8 5.1E-19 1.1E-23 178.9 15.0 121 53-180 107-232 (260)
17 PRK10826 2-deoxyglucose-6-phos 99.8 6.1E-19 1.3E-23 172.9 14.8 120 51-175 88-212 (222)
18 PRK11587 putative phosphatase; 99.8 1.1E-18 2.5E-23 170.8 15.8 119 51-177 79-202 (218)
19 TIGR03351 PhnX-like phosphonat 99.8 1E-18 2.2E-23 170.6 15.3 119 53-175 85-212 (220)
20 TIGR01449 PGP_bact 2-phosphogl 99.8 8.5E-19 1.8E-23 169.7 14.0 120 53-176 83-207 (213)
21 PRK06769 hypothetical protein; 99.8 5.7E-19 1.2E-23 167.9 11.3 146 12-175 1-164 (173)
22 PRK13478 phosphonoacetaldehyde 99.8 1.4E-18 3.1E-23 175.4 14.8 125 52-177 98-249 (267)
23 PLN02575 haloacid dehalogenase 99.8 2.2E-18 4.8E-23 181.9 15.9 124 52-182 213-341 (381)
24 PRK14988 GMP/IMP nucleotidase; 99.8 1.8E-18 3.8E-23 170.9 13.0 104 52-156 90-199 (224)
25 TIGR01428 HAD_type_II 2-haloal 99.8 2.8E-18 6.2E-23 164.9 14.1 101 52-153 89-194 (198)
26 PRK13223 phosphoglycolate phos 99.8 4.4E-18 9.6E-23 172.9 15.0 122 53-178 99-225 (272)
27 PRK13222 phosphoglycolate phos 99.8 8.7E-18 1.9E-22 163.9 15.2 120 53-176 91-215 (226)
28 PLN02940 riboflavin kinase 99.8 9.3E-18 2E-22 178.5 16.1 136 51-196 89-230 (382)
29 PRK09449 dUMP phosphatase; Pro 99.7 1.7E-17 3.7E-22 162.4 14.2 116 53-175 93-215 (224)
30 PRK10725 fructose-1-P/6-phosph 99.7 1.4E-17 3E-22 158.4 13.2 97 52-151 85-186 (188)
31 PRK08942 D,D-heptose 1,7-bisph 99.7 1.5E-17 3.2E-22 158.6 12.4 142 15-175 2-169 (181)
32 TIGR01990 bPGM beta-phosphoglu 99.7 1.9E-17 4.2E-22 156.6 12.9 96 53-151 85-185 (185)
33 TIGR02254 YjjG/YfnB HAD superf 99.7 3.4E-17 7.4E-22 159.3 14.8 116 53-175 95-217 (224)
34 TIGR00213 GmhB_yaeD D,D-heptos 99.7 2.9E-17 6.3E-22 156.2 13.2 139 17-175 2-171 (176)
35 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1.3E-17 2.9E-22 150.5 10.0 120 17-151 1-131 (132)
36 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 2.9E-17 6.3E-22 155.3 12.2 96 52-150 85-185 (185)
37 PF13419 HAD_2: Haloacid dehal 99.7 4.5E-17 9.8E-22 150.2 12.2 99 51-150 73-176 (176)
38 PLN02779 haloacid dehalogenase 99.7 9.3E-17 2E-21 164.5 15.2 127 54-186 143-276 (286)
39 PRK10563 6-phosphogluconate ph 99.7 7E-17 1.5E-21 157.9 12.9 99 52-154 85-189 (221)
40 TIGR01656 Histidinol-ppas hist 99.7 4.3E-17 9.3E-22 150.7 10.6 125 17-153 1-147 (147)
41 PRK06698 bifunctional 5'-methy 99.7 6.7E-17 1.4E-21 175.7 13.8 116 53-176 328-447 (459)
42 TIGR02247 HAD-1A3-hyp Epoxide 99.7 5.1E-17 1.1E-21 157.8 11.6 108 53-161 92-206 (211)
43 PRK09456 ?-D-glucose-1-phospha 99.7 1.1E-16 2.4E-21 154.6 12.6 108 54-162 83-196 (199)
44 TIGR01509 HAD-SF-IA-v3 haloaci 99.7 1E-16 2.2E-21 150.8 11.9 95 54-150 84-183 (183)
45 TIGR02252 DREG-2 REG-2-like, H 99.7 3.4E-16 7.3E-21 151.0 12.4 94 54-149 104-203 (203)
46 PHA02597 30.2 hypothetical pro 99.7 4.1E-16 8.8E-21 150.0 12.4 100 52-155 71-178 (197)
47 TIGR01668 YqeG_hyp_ppase HAD s 99.7 3.9E-16 8.3E-21 148.1 11.8 118 15-158 24-143 (170)
48 TIGR01993 Pyr-5-nucltdase pyri 99.7 3.9E-16 8.4E-21 148.6 11.3 94 53-150 82-184 (184)
49 PRK10748 flavin mononucleotide 99.7 6.6E-16 1.4E-20 153.7 12.6 96 52-154 110-211 (238)
50 COG1011 Predicted hydrolase (H 99.7 1.3E-15 2.8E-20 148.7 13.9 101 53-155 97-203 (229)
51 TIGR00338 serB phosphoserine p 99.6 7.8E-16 1.7E-20 150.1 12.1 96 51-147 81-191 (219)
52 TIGR01691 enolase-ppase 2,3-di 99.6 1.5E-15 3.3E-20 150.0 13.6 103 51-154 91-199 (220)
53 TIGR01261 hisB_Nterm histidino 99.6 6.1E-16 1.3E-20 145.8 9.4 124 17-154 2-150 (161)
54 PLN02770 haloacid dehalogenase 99.6 1E-15 2.2E-20 153.4 11.4 106 420-526 105-215 (248)
55 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.1E-15 2.4E-20 138.5 8.6 115 17-142 1-126 (128)
56 COG0637 Predicted phosphatase/ 99.6 1.3E-15 2.8E-20 150.4 9.8 106 417-523 80-190 (221)
57 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 3.9E-15 8.4E-20 140.9 10.8 121 16-149 13-160 (166)
58 TIGR01422 phosphonatase phosph 99.6 2.9E-15 6.2E-20 149.9 10.2 104 419-523 95-205 (253)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.6 6.6E-15 1.4E-19 140.9 12.3 102 51-153 76-192 (201)
60 TIGR01449 PGP_bact 2-phosphogl 99.6 5.3E-15 1.1E-19 143.2 11.0 105 418-523 80-189 (213)
61 PLN02954 phosphoserine phospha 99.6 2.5E-14 5.3E-19 140.1 15.6 116 53-175 82-216 (224)
62 TIGR01549 HAD-SF-IA-v1 haloaci 99.6 7.9E-15 1.7E-19 135.2 11.4 91 51-144 60-154 (154)
63 PRK14988 GMP/IMP nucleotidase; 99.6 4.1E-15 8.8E-20 147.0 9.8 106 418-524 88-199 (224)
64 COG0546 Gph Predicted phosphat 99.6 5.8E-15 1.3E-19 145.3 10.3 101 422-523 88-193 (220)
65 TIGR01672 AphA HAD superfamily 99.6 1.4E-14 3E-19 144.7 13.0 133 18-156 65-216 (237)
66 TIGR01548 HAD-SF-IA-hyp1 haloa 99.6 1.1E-14 2.5E-19 140.2 11.5 88 55-143 106-197 (197)
67 TIGR01454 AHBA_synth_RP 3-amin 99.6 9.1E-15 2E-19 141.5 10.7 104 420-524 72-180 (205)
68 PRK13226 phosphoglycolate phos 99.6 7.5E-15 1.6E-19 145.2 10.3 105 418-523 90-199 (229)
69 PRK13288 pyrophosphatase PpaX; 99.6 9.5E-15 2E-19 142.3 10.5 104 420-524 79-187 (214)
70 PLN02575 haloacid dehalogenase 99.6 1.3E-14 2.7E-19 153.6 11.6 106 419-525 212-322 (381)
71 PRK10826 2-deoxyglucose-6-phos 99.6 1.3E-14 2.9E-19 142.2 11.0 106 418-524 87-197 (222)
72 PLN03243 haloacid dehalogenase 99.6 1.4E-14 3E-19 146.6 11.2 100 420-520 106-210 (260)
73 PRK06769 hypothetical protein; 99.6 1E-14 2.2E-19 138.8 8.8 104 421-524 26-142 (173)
74 PRK13225 phosphoglycolate phos 99.6 1.8E-14 3.8E-19 146.9 11.1 107 418-525 137-245 (273)
75 TIGR01656 Histidinol-ppas hist 99.6 1.5E-14 3.3E-19 133.7 9.6 101 421-521 25-147 (147)
76 TIGR02253 CTE7 HAD superfamily 99.5 2E-14 4.3E-19 140.1 10.8 103 421-524 92-200 (221)
77 KOG3085|consensus 99.5 2.2E-14 4.8E-19 142.3 10.8 101 53-155 111-217 (237)
78 cd01427 HAD_like Haloacid deha 99.5 3.4E-14 7.3E-19 124.9 10.5 118 18-150 1-139 (139)
79 smart00577 CPDc catalytic doma 99.5 9.4E-15 2E-19 135.5 7.3 128 384-516 2-139 (148)
80 PRK13478 phosphonoacetaldehyde 99.5 2.9E-14 6.2E-19 144.1 11.0 106 417-523 95-207 (267)
81 PRK11587 putative phosphatase; 99.5 3.8E-14 8.3E-19 138.8 11.2 104 419-524 79-187 (218)
82 PRK08942 D,D-heptose 1,7-bisph 99.5 4.7E-14 1E-18 134.5 11.5 103 421-525 27-153 (181)
83 TIGR01261 hisB_Nterm histidino 99.5 6.8E-14 1.5E-18 131.9 12.1 107 421-529 27-158 (161)
84 TIGR00213 GmhB_yaeD D,D-heptos 99.5 5.1E-14 1.1E-18 133.9 11.0 122 385-523 2-155 (176)
85 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 2.8E-14 6E-19 129.3 8.3 88 423-510 29-126 (128)
86 TIGR01428 HAD_type_II 2-haloal 99.5 5E-14 1.1E-18 135.5 10.4 106 414-521 84-194 (198)
87 TIGR03351 PhnX-like phosphonat 99.5 5.2E-14 1.1E-18 137.4 10.3 103 421-524 85-196 (220)
88 PLN02811 hydrolase 99.5 4.7E-14 1E-18 138.5 10.0 105 420-524 75-189 (220)
89 TIGR01686 FkbH FkbH-like domai 99.5 2.7E-14 5.9E-19 148.5 8.7 120 15-146 2-125 (320)
90 PHA02530 pseT polynucleotide k 99.5 7.1E-14 1.5E-18 143.1 11.2 128 16-154 158-299 (300)
91 PRK09456 ?-D-glucose-1-phospha 99.5 4.8E-14 1E-18 136.2 9.4 108 422-530 83-196 (199)
92 TIGR01990 bPGM beta-phosphoglu 99.5 5.8E-14 1.3E-18 132.8 9.1 96 421-519 85-185 (185)
93 KOG2914|consensus 99.5 1.3E-13 2.9E-18 136.0 11.6 102 50-152 87-197 (222)
94 TIGR01452 PGP_euk phosphoglyco 99.5 1.4E-13 3E-18 140.3 12.2 68 109-176 204-277 (279)
95 PRK10444 UMP phosphatase; Prov 99.5 3.1E-13 6.8E-18 135.9 14.4 69 108-177 175-244 (248)
96 TIGR01670 YrbI-phosphatas 3-de 99.5 4.9E-14 1.1E-18 131.6 7.9 135 16-175 1-135 (154)
97 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 1.6E-13 3.6E-18 138.4 11.9 68 108-176 180-248 (257)
98 COG2179 Predicted hydrolase of 99.5 1.3E-13 2.9E-18 128.4 9.5 110 15-152 27-139 (175)
99 PLN02811 hydrolase 99.5 1.6E-13 3.6E-18 134.6 10.7 120 52-177 75-205 (220)
100 PRK05446 imidazole glycerol-ph 99.5 2.3E-13 4.9E-18 143.1 12.2 123 16-152 2-149 (354)
101 TIGR02009 PGMB-YQAB-SF beta-ph 99.5 1.2E-13 2.5E-18 130.7 8.9 96 420-518 85-185 (185)
102 PLN02645 phosphoglycolate phos 99.5 1.4E-13 3.1E-18 142.5 9.4 68 109-176 232-301 (311)
103 PRK13582 thrH phosphoserine ph 99.5 4.2E-13 9.1E-18 129.5 12.0 94 52-147 65-167 (205)
104 TIGR01509 HAD-SF-IA-v3 haloaci 99.5 2.7E-13 5.9E-18 127.4 9.9 95 422-518 84-183 (183)
105 PLN02940 riboflavin kinase 99.5 2.2E-13 4.8E-18 145.1 10.3 103 420-523 90-198 (382)
106 PRK09449 dUMP phosphatase; Pro 99.4 3E-13 6.5E-18 132.4 10.4 102 417-520 89-197 (224)
107 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 1.1E-13 2.4E-18 130.2 7.0 84 52-143 87-175 (175)
108 TIGR01691 enolase-ppase 2,3-di 99.4 3.3E-13 7.2E-18 133.4 10.6 103 419-522 91-199 (220)
109 TIGR01662 HAD-SF-IIIA HAD-supe 99.4 5.4E-13 1.2E-17 120.4 11.0 98 421-519 23-131 (132)
110 PRK13223 phosphoglycolate phos 99.4 3.3E-13 7.2E-18 137.3 10.8 103 421-524 99-206 (272)
111 PRK11133 serB phosphoserine ph 99.4 3.2E-13 7E-18 140.6 10.9 98 51-149 177-289 (322)
112 TIGR02247 HAD-1A3-hyp Epoxide 99.4 2.1E-13 4.5E-18 132.4 8.9 103 420-522 91-199 (211)
113 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.4 3.9E-13 8.4E-18 134.2 10.7 212 304-519 12-241 (242)
114 PF13419 HAD_2: Haloacid dehal 99.4 3.1E-13 6.6E-18 124.6 9.1 98 420-518 74-176 (176)
115 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 1.3E-12 2.9E-17 131.2 14.2 66 109-175 180-246 (249)
116 PRK10725 fructose-1-P/6-phosph 99.4 2.6E-13 5.7E-18 128.9 8.6 98 420-520 85-187 (188)
117 PHA02530 pseT polynucleotide k 99.4 1.7E-12 3.6E-17 133.0 14.8 125 383-521 157-298 (300)
118 PLN02779 haloacid dehalogenase 99.4 5.5E-13 1.2E-17 136.7 10.7 102 422-524 143-251 (286)
119 PRK13222 phosphoglycolate phos 99.4 9.6E-13 2.1E-17 128.4 11.4 104 419-523 89-197 (226)
120 TIGR02726 phenyl_P_delta pheny 99.4 5.5E-13 1.2E-17 126.8 9.4 117 15-148 6-122 (169)
121 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.4 8.5E-13 1.8E-17 133.3 11.1 205 304-523 5-228 (257)
122 PRK09484 3-deoxy-D-manno-octul 99.4 2.3E-13 5.1E-18 130.6 6.4 135 15-174 20-154 (183)
123 TIGR02254 YjjG/YfnB HAD superf 99.4 8.9E-13 1.9E-17 128.3 10.3 101 420-522 94-201 (224)
124 smart00577 CPDc catalytic doma 99.4 8.9E-14 1.9E-18 128.9 3.0 126 17-147 3-138 (148)
125 TIGR01668 YqeG_hyp_ppase HAD s 99.4 1.3E-12 2.7E-17 124.0 10.6 107 422-532 42-150 (170)
126 TIGR01664 DNA-3'-Pase DNA 3'-p 99.4 1.3E-12 2.7E-17 123.8 10.5 123 377-516 7-159 (166)
127 PRK06698 bifunctional 5'-methy 99.4 9.5E-13 2.1E-17 143.3 10.6 101 421-524 328-432 (459)
128 TIGR01672 AphA HAD superfamily 99.4 1.5E-12 3.2E-17 130.1 10.5 144 374-524 53-216 (237)
129 PRK10563 6-phosphogluconate ph 99.4 1.5E-12 3.2E-17 127.3 10.1 99 418-520 83-187 (221)
130 PRK09552 mtnX 2-hydroxy-3-keto 99.4 3.2E-12 7E-17 125.5 12.3 95 51-147 70-183 (219)
131 KOG3109|consensus 99.4 3.6E-12 7.7E-17 123.5 12.1 99 53-154 98-208 (244)
132 PRK11009 aphA acid phosphatase 99.4 3.8E-12 8.3E-17 127.1 12.6 135 17-156 64-216 (237)
133 TIGR01489 DKMTPPase-SF 2,3-dik 99.4 2.2E-12 4.9E-17 121.9 10.2 92 52-147 69-185 (188)
134 COG0647 NagD Predicted sugar p 99.4 4.5E-12 9.7E-17 128.5 13.0 66 110-176 193-259 (269)
135 TIGR02252 DREG-2 REG-2-like, H 99.4 1.8E-12 3.8E-17 125.1 9.5 94 421-516 103-202 (203)
136 COG4996 Predicted phosphatase 99.3 1.5E-12 3.2E-17 116.6 6.6 133 17-150 1-144 (164)
137 TIGR01993 Pyr-5-nucltdase pyri 99.3 2.3E-12 5E-17 122.6 8.2 94 421-518 82-184 (184)
138 TIGR01452 PGP_euk phosphoglyco 99.3 3.8E-12 8.2E-17 129.8 9.5 214 304-525 6-253 (279)
139 PRK11009 aphA acid phosphatase 99.3 1.3E-11 2.8E-16 123.3 12.0 143 372-524 51-216 (237)
140 PLN02919 haloacid dehalogenase 99.3 1.1E-11 2.3E-16 147.1 11.7 103 423-526 161-269 (1057)
141 PRK10748 flavin mononucleotide 99.3 1.1E-11 2.5E-16 123.3 9.3 95 420-521 110-210 (238)
142 PRK05446 imidazole glycerol-ph 99.3 5.4E-11 1.2E-15 125.3 14.7 136 384-533 2-163 (354)
143 TIGR01686 FkbH FkbH-like domai 99.3 1.1E-11 2.4E-16 128.9 9.3 90 424-514 32-125 (320)
144 cd01427 HAD_like Haloacid deha 99.3 2.8E-11 6.2E-16 106.2 10.1 99 419-518 20-139 (139)
145 TIGR01670 YrbI-phosphatas 3-de 99.3 1.5E-11 3.2E-16 114.9 8.3 86 431-522 36-121 (154)
146 TIGR01488 HAD-SF-IB Haloacid D 99.2 2.5E-11 5.4E-16 114.0 9.1 92 51-143 69-177 (177)
147 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.2 2.8E-11 6.1E-16 115.8 9.4 102 420-522 77-193 (201)
148 PHA02597 30.2 hypothetical pro 99.2 2.5E-11 5.4E-16 116.7 8.9 98 421-522 72-177 (197)
149 TIGR01549 HAD-SF-IA-v1 haloaci 99.2 2.9E-11 6.3E-16 111.4 8.6 89 421-512 62-154 (154)
150 KOG2914|consensus 99.2 3.4E-11 7.3E-16 119.0 9.3 108 412-520 81-197 (222)
151 TIGR01548 HAD-SF-IA-hyp1 haloa 99.2 3.5E-11 7.6E-16 115.9 9.2 88 423-511 106-197 (197)
152 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.2 5.3E-11 1.1E-15 114.6 10.0 94 54-148 86-195 (202)
153 PF00702 Hydrolase: haloacid d 99.2 6.7E-11 1.4E-15 113.7 10.4 89 53-144 125-215 (215)
154 TIGR00338 serB phosphoserine p 99.2 5.8E-11 1.3E-15 115.8 9.6 98 418-516 80-192 (219)
155 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 5.5E-11 1.2E-15 118.7 9.5 107 15-145 7-116 (242)
156 TIGR03333 salvage_mtnX 2-hydro 99.2 1.2E-10 2.6E-15 114.0 11.3 93 52-145 67-177 (214)
157 KOG4549|consensus 99.2 2.8E-11 6.1E-16 107.7 5.5 89 307-395 38-134 (144)
158 KOG2882|consensus 99.2 1.2E-10 2.6E-15 118.0 10.8 64 111-174 228-295 (306)
159 COG0560 SerB Phosphoserine pho 99.2 2.3E-10 5E-15 112.6 12.2 97 51-148 72-184 (212)
160 COG0241 HisB Histidinol phosph 99.2 2.3E-10 5.1E-15 109.5 11.6 126 16-156 5-154 (181)
161 COG1011 Predicted hydrolase (H 99.2 1.3E-10 2.7E-15 113.5 10.1 99 421-521 97-201 (229)
162 TIGR02137 HSK-PSP phosphoserin 99.1 2.4E-10 5.1E-15 111.8 11.4 122 51-185 64-197 (203)
163 TIGR02726 phenyl_P_delta pheny 99.1 1.1E-10 2.5E-15 110.9 8.5 80 432-516 43-122 (169)
164 PRK11133 serB phosphoserine ph 99.1 1.1E-10 2.5E-15 121.6 8.0 103 414-517 172-289 (322)
165 PRK09484 3-deoxy-D-manno-octul 99.1 2.6E-10 5.6E-15 109.5 7.8 84 431-520 56-139 (183)
166 TIGR01460 HAD-SF-IIA Haloacid 99.1 4.5E-10 9.7E-15 112.0 9.8 45 109-153 190-236 (236)
167 PF09419 PGP_phosphatase: Mito 99.1 4.6E-10 1E-14 106.4 9.0 115 14-154 39-167 (168)
168 PLN02645 phosphoglycolate phos 99.0 5E-10 1.1E-14 116.2 9.1 217 303-525 31-281 (311)
169 PLN02954 phosphoserine phospha 99.0 1E-09 2.2E-14 107.4 10.7 98 422-522 83-199 (224)
170 KOG4549|consensus 99.0 8.5E-10 1.8E-14 98.4 8.8 113 382-504 3-134 (144)
171 TIGR01663 PNK-3'Pase polynucle 99.0 8E-10 1.7E-14 121.8 10.6 118 15-146 167-306 (526)
172 PF13242 Hydrolase_like: HAD-h 99.0 1.1E-09 2.4E-14 89.9 7.6 72 105-177 2-74 (75)
173 PTZ00445 p36-lilke protein; Pr 99.0 9.7E-10 2.1E-14 107.0 8.3 132 15-153 42-207 (219)
174 KOG3085|consensus 99.0 1.4E-09 3E-14 108.2 9.1 103 421-525 111-219 (237)
175 TIGR01493 HAD-SF-IA-v2 Haloaci 99.0 5.7E-10 1.2E-14 104.9 4.7 83 421-511 88-175 (175)
176 PRK09552 mtnX 2-hydroxy-3-keto 98.9 1.7E-09 3.6E-14 106.3 7.9 102 413-516 64-184 (219)
177 TIGR02251 HIF-SF_euk Dullard-l 98.9 1.2E-09 2.5E-14 103.2 5.5 104 417-523 36-143 (162)
178 COG4229 Predicted enolase-phos 98.9 6.8E-09 1.5E-13 98.2 9.4 100 51-151 99-204 (229)
179 TIGR01489 DKMTPPase-SF 2,3-dik 98.9 5.3E-09 1.1E-13 98.8 8.4 91 421-515 70-185 (188)
180 PRK13582 thrH phosphoserine ph 98.9 6.8E-09 1.5E-13 100.1 8.4 95 420-516 65-168 (205)
181 PRK10530 pyridoxal phosphate ( 98.8 3.9E-08 8.5E-13 98.8 14.0 68 109-184 200-268 (272)
182 PTZ00445 p36-lilke protein; Pr 98.8 7.7E-09 1.7E-13 100.8 8.0 153 358-521 15-207 (219)
183 PRK01158 phosphoglycolate phos 98.8 4.3E-08 9.3E-13 96.2 13.4 68 109-184 158-226 (230)
184 PRK08238 hypothetical protein; 98.8 2.6E-08 5.7E-13 109.2 12.8 102 53-161 70-175 (479)
185 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.8 9.5E-09 2.1E-13 98.9 7.7 98 422-520 86-199 (202)
186 COG1778 Low specificity phosph 98.8 6.1E-09 1.3E-13 96.5 5.8 114 15-148 7-123 (170)
187 COG2179 Predicted hydrolase of 98.8 3E-08 6.5E-13 93.0 9.8 101 424-531 47-150 (175)
188 TIGR01533 lipo_e_P4 5'-nucleot 98.8 2.6E-08 5.5E-13 101.3 10.2 122 15-142 74-206 (266)
189 PF00702 Hydrolase: haloacid d 98.8 1.5E-08 3.4E-13 97.2 8.0 88 422-512 126-215 (215)
190 TIGR02251 HIF-SF_euk Dullard-l 98.8 1.7E-09 3.6E-14 102.1 0.8 131 17-152 2-140 (162)
191 KOG3040|consensus 98.7 5.7E-08 1.2E-12 93.9 10.7 120 16-158 7-233 (262)
192 TIGR02244 HAD-IG-Ncltidse HAD 98.7 3E-08 6.4E-13 104.1 9.4 100 51-152 180-324 (343)
193 TIGR01487 SPP-like sucrose-pho 98.7 6.3E-08 1.4E-12 94.6 10.8 114 16-153 1-191 (215)
194 TIGR01488 HAD-SF-IB Haloacid D 98.7 4.1E-08 8.9E-13 92.1 7.8 94 417-511 67-177 (177)
195 TIGR01544 HAD-SF-IE haloacid d 98.7 3.5E-07 7.7E-12 93.4 15.1 124 52-178 118-267 (277)
196 TIGR03333 salvage_mtnX 2-hydro 98.7 5.4E-08 1.2E-12 95.3 8.8 93 420-513 67-177 (214)
197 PF08645 PNK3P: Polynucleotide 98.7 4.8E-08 1E-12 92.1 7.6 121 17-148 1-153 (159)
198 TIGR01482 SPP-subfamily Sucros 98.7 2.5E-07 5.4E-12 90.4 12.4 44 109-153 150-193 (225)
199 PF06888 Put_Phosphatase: Puta 98.7 4.1E-07 8.8E-12 90.9 14.0 130 50-180 66-227 (234)
200 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.6 1.2E-07 2.6E-12 95.4 10.2 201 304-525 5-229 (249)
201 PRK11590 hypothetical protein; 98.6 4.9E-07 1.1E-11 88.5 14.0 97 54-152 94-203 (211)
202 KOG3109|consensus 98.6 9.2E-08 2E-12 93.2 8.5 106 423-531 100-217 (244)
203 PRK10530 pyridoxal phosphate ( 98.6 2.2E-07 4.7E-12 93.5 11.6 209 304-520 7-242 (272)
204 KOG1615|consensus 98.6 2.4E-07 5.3E-12 88.7 11.1 89 51-142 84-191 (227)
205 TIGR01544 HAD-SF-IE haloacid d 98.6 2.6E-07 5.7E-12 94.3 10.2 126 410-536 107-255 (277)
206 PF12710 HAD: haloacid dehalog 98.6 2.2E-07 4.7E-12 88.1 8.9 84 56-141 86-192 (192)
207 COG0560 SerB Phosphoserine pho 98.6 1.1E-07 2.4E-12 93.7 7.0 104 416-520 69-188 (212)
208 TIGR01525 ATPase-IB_hvy heavy 98.6 2.7E-07 5.8E-12 103.2 10.6 109 53-176 382-491 (556)
209 COG4359 Uncharacterized conser 98.5 6.1E-07 1.3E-11 85.3 10.8 91 51-146 69-181 (220)
210 TIGR02244 HAD-IG-Ncltidse HAD 98.5 3.5E-07 7.6E-12 96.1 10.1 101 420-522 181-326 (343)
211 TIGR01545 YfhB_g-proteo haloac 98.5 1.4E-06 3.1E-11 85.6 13.7 97 53-151 92-201 (210)
212 PRK15126 thiamin pyrimidine py 98.5 5.5E-07 1.2E-11 91.1 11.1 69 112-186 192-261 (272)
213 PF13344 Hydrolase_6: Haloacid 98.5 5.7E-07 1.2E-11 78.4 9.4 98 19-145 1-100 (101)
214 TIGR01525 ATPase-IB_hvy heavy 98.5 2.3E-07 5E-12 103.7 8.6 93 419-521 380-473 (556)
215 TIGR01684 viral_ppase viral ph 98.5 2E-07 4.2E-12 95.4 7.3 67 15-102 125-192 (301)
216 TIGR02137 HSK-PSP phosphoserin 98.5 5.1E-07 1.1E-11 88.4 9.9 95 421-520 66-172 (203)
217 PRK10976 putative hydrolase; P 98.5 7.2E-07 1.6E-11 89.8 11.2 41 112-153 194-234 (266)
218 TIGR01512 ATPase-IB2_Cd heavy 98.5 3.2E-07 6.9E-12 102.2 7.7 93 420-522 359-452 (536)
219 PRK10513 sugar phosphate phosp 98.4 2.3E-06 5.1E-11 86.2 13.2 67 111-185 199-266 (270)
220 COG0561 Cof Predicted hydrolas 98.4 1.4E-06 2.9E-11 87.8 11.2 59 15-96 2-60 (264)
221 TIGR01663 PNK-3'Pase polynucle 98.4 1.1E-06 2.3E-11 97.3 11.3 88 424-514 198-306 (526)
222 TIGR01460 HAD-SF-IIA Haloacid 98.4 1.4E-06 3.1E-11 86.9 10.0 209 304-521 2-236 (236)
223 TIGR01512 ATPase-IB2_Cd heavy 98.4 1.6E-06 3.5E-11 96.6 10.9 107 54-174 361-468 (536)
224 PHA03398 viral phosphatase sup 98.4 9E-07 2E-11 90.7 8.0 67 15-102 127-194 (303)
225 PF08282 Hydrolase_3: haloacid 98.3 3.4E-06 7.4E-11 82.2 10.4 55 19-96 1-55 (254)
226 TIGR00099 Cof-subfamily Cof su 98.3 4.6E-06 1E-10 83.6 11.3 37 111-147 191-227 (256)
227 TIGR01511 ATPase-IB1_Cu copper 98.3 3.1E-06 6.7E-11 94.9 10.8 106 54-175 404-509 (562)
228 COG0241 HisB Histidinol phosph 98.3 4.6E-06 9.9E-11 80.2 9.9 123 384-522 5-152 (181)
229 TIGR02250 FCP1_euk FCP1-like p 98.3 2.4E-06 5.2E-11 80.4 7.4 89 419-509 54-144 (156)
230 TIGR01511 ATPase-IB1_Cu copper 98.2 2.5E-06 5.4E-11 95.6 8.8 86 420-513 402-487 (562)
231 PRK10444 UMP phosphatase; Prov 98.2 3.7E-05 8E-10 77.6 16.4 195 304-526 5-226 (248)
232 TIGR02463 MPGP_rel mannosyl-3- 98.2 1.4E-05 3.1E-10 78.2 12.0 187 305-516 4-219 (221)
233 TIGR01485 SPP_plant-cyano sucr 98.2 1.8E-05 4E-10 79.2 12.9 47 108-154 167-213 (249)
234 PRK00192 mannosyl-3-phosphogly 98.2 8.4E-06 1.8E-10 82.8 10.4 198 304-521 8-235 (273)
235 TIGR01484 HAD-SF-IIB HAD-super 98.2 9.4E-06 2E-10 78.3 10.0 39 109-147 164-202 (204)
236 TIGR01533 lipo_e_P4 5'-nucleot 98.2 1.6E-05 3.5E-10 81.0 11.9 85 420-508 115-204 (266)
237 PF13242 Hydrolase_like: HAD-h 98.2 2.3E-06 5E-11 70.2 4.5 53 475-527 4-57 (75)
238 PLN02887 hydrolase family prot 98.2 2.5E-05 5.4E-10 87.7 14.1 64 113-184 512-576 (580)
239 PF03767 Acid_phosphat_B: HAD 98.1 6.9E-06 1.5E-10 81.9 6.6 123 15-143 71-211 (229)
240 TIGR01684 viral_ppase viral ph 98.1 7.8E-06 1.7E-10 83.8 7.0 69 380-469 122-191 (301)
241 PRK10671 copA copper exporting 98.1 6.3E-06 1.4E-10 96.5 7.1 86 421-513 648-733 (834)
242 COG3882 FkbH Predicted enzyme 98.1 1.8E-05 4E-10 84.9 9.9 124 14-145 220-348 (574)
243 PRK10671 copA copper exporting 98.0 2.2E-05 4.7E-10 92.0 11.4 114 55-183 650-764 (834)
244 PRK08238 hypothetical protein; 98.0 1.5E-05 3.3E-10 87.6 9.5 94 421-521 70-167 (479)
245 KOG3120|consensus 98.0 4E-05 8.7E-10 75.1 11.0 107 51-158 80-217 (256)
246 COG4229 Predicted enolase-phos 98.0 1.3E-05 2.8E-10 76.4 7.0 97 421-520 101-205 (229)
247 TIGR02250 FCP1_euk FCP1-like p 98.0 9.5E-06 2.1E-10 76.3 6.0 120 16-138 6-141 (156)
248 TIGR01482 SPP-subfamily Sucros 98.0 6.2E-05 1.3E-09 73.5 11.4 178 305-521 3-193 (225)
249 PHA03398 viral phosphatase sup 97.9 1.6E-05 3.5E-10 81.6 6.8 74 375-469 118-193 (303)
250 TIGR01675 plant-AP plant acid 97.9 3.7E-05 8E-10 76.7 9.0 128 16-152 77-223 (229)
251 TIGR01487 SPP-like sucrose-pho 97.9 6.9E-05 1.5E-09 73.2 10.7 176 304-521 5-191 (215)
252 COG1778 Low specificity phosph 97.9 1.7E-05 3.8E-10 73.9 5.8 117 380-516 4-123 (170)
253 TIGR01522 ATPase-IIA2_Ca golgi 97.9 7.2E-05 1.6E-09 88.2 11.8 113 55-175 528-661 (884)
254 PF09419 PGP_phosphatase: Mito 97.9 9.9E-05 2.2E-09 70.3 10.3 97 422-523 58-168 (168)
255 TIGR02471 sucr_syn_bact_C sucr 97.9 8E-05 1.7E-09 73.9 10.1 44 108-152 159-202 (236)
256 PRK00192 mannosyl-3-phosphogly 97.8 3.4E-05 7.4E-10 78.4 6.6 63 15-100 3-65 (273)
257 smart00775 LNS2 LNS2 domain. T 97.8 0.00016 3.6E-09 67.9 10.5 117 18-146 1-141 (157)
258 PF03031 NIF: NLI interacting 97.7 1.8E-05 3.8E-10 73.8 1.7 125 17-146 1-128 (159)
259 COG3882 FkbH Predicted enzyme 97.6 0.00029 6.2E-09 76.0 10.3 163 336-513 166-348 (574)
260 PRK10187 trehalose-6-phosphate 97.6 0.00037 8.1E-09 71.0 10.6 43 111-153 177-222 (266)
261 COG0561 Cof Predicted hydrolas 97.6 0.00037 8E-09 70.1 10.4 198 304-521 7-233 (264)
262 PLN02382 probable sucrose-phos 97.6 0.0012 2.5E-08 71.6 14.9 80 108-189 175-262 (413)
263 TIGR00685 T6PP trehalose-phosp 97.6 0.00039 8.4E-09 69.7 10.4 58 109-175 168-232 (244)
264 PF12710 HAD: haloacid dehalog 97.6 0.00014 3E-09 68.8 6.7 82 426-509 92-192 (192)
265 PRK01158 phosphoglycolate phos 97.6 0.00055 1.2E-08 67.1 11.0 176 304-520 7-200 (230)
266 PRK11590 hypothetical protein; 97.6 0.00043 9.3E-09 67.8 10.2 99 421-520 93-204 (211)
267 TIGR01522 ATPase-IIA2_Ca golgi 97.6 0.00027 5.8E-09 83.5 9.9 98 421-522 526-644 (884)
268 TIGR01485 SPP_plant-cyano sucr 97.5 0.00026 5.6E-09 70.9 8.3 181 305-521 6-212 (249)
269 PF06941 NT5C: 5' nucleotidase 97.5 0.00018 3.8E-09 69.4 6.7 91 51-155 69-166 (191)
270 PRK11033 zntA zinc/cadmium/mer 97.5 0.00062 1.4E-08 78.9 12.3 104 55-175 568-671 (741)
271 TIGR01680 Veg_Stor_Prot vegeta 97.5 0.00037 8.1E-09 71.0 9.1 131 16-153 101-251 (275)
272 PRK11033 zntA zinc/cadmium/mer 97.5 0.00022 4.8E-09 82.6 8.3 84 421-513 566-649 (741)
273 PF05761 5_nucleotid: 5' nucle 97.5 0.00034 7.4E-09 76.3 8.8 99 53-153 181-326 (448)
274 PF11019 DUF2608: Protein of u 97.5 0.0013 2.8E-08 66.7 12.4 138 17-154 21-212 (252)
275 PF11019 DUF2608: Protein of u 97.5 0.00054 1.2E-08 69.4 9.6 102 420-521 78-211 (252)
276 TIGR02461 osmo_MPG_phos mannos 97.5 0.00022 4.8E-09 70.8 6.4 55 18-96 1-55 (225)
277 TIGR01456 CECR5 HAD-superfamil 97.4 0.00022 4.7E-09 74.6 6.6 70 105-176 231-314 (321)
278 PF03031 NIF: NLI interacting 97.4 5.7E-05 1.2E-09 70.3 1.7 97 418-517 31-131 (159)
279 TIGR00099 Cof-subfamily Cof su 97.4 0.00082 1.8E-08 67.3 9.7 197 305-520 4-231 (256)
280 PRK12702 mannosyl-3-phosphogly 97.4 0.00036 7.7E-09 71.9 6.6 61 16-99 1-61 (302)
281 PRK03669 mannosyl-3-phosphogly 97.3 0.00042 9.1E-09 70.3 7.0 57 16-95 7-63 (271)
282 COG4087 Soluble P-type ATPase 97.3 0.0022 4.8E-08 58.4 10.3 97 51-153 26-122 (152)
283 TIGR01456 CECR5 HAD-superfamil 97.2 0.0004 8.7E-09 72.6 5.6 100 18-148 2-108 (321)
284 COG0647 NagD Predicted sugar p 97.2 0.0032 7E-08 64.4 11.9 196 304-524 12-240 (269)
285 TIGR01545 YfhB_g-proteo haloac 97.2 0.0019 4.1E-08 63.6 9.9 99 421-520 92-203 (210)
286 COG2503 Predicted secreted aci 97.2 0.0017 3.7E-08 64.8 9.2 124 15-144 78-213 (274)
287 TIGR01116 ATPase-IIA1_Ca sarco 97.2 0.0021 4.5E-08 76.3 11.7 113 55-176 537-674 (917)
288 TIGR02461 osmo_MPG_phos mannos 97.2 0.0035 7.6E-08 62.2 11.2 54 305-359 4-60 (225)
289 PF06888 Put_Phosphatase: Puta 97.1 0.0018 3.9E-08 64.9 9.0 101 420-523 68-201 (234)
290 COG4359 Uncharacterized conser 97.1 0.0012 2.7E-08 63.2 6.7 98 414-512 64-179 (220)
291 TIGR01486 HAD-SF-IIB-MPGP mann 97.1 0.00092 2E-08 67.1 6.2 41 476-516 176-218 (256)
292 COG4087 Soluble P-type ATPase 97.1 0.0036 7.7E-08 57.1 9.0 93 422-520 29-121 (152)
293 PTZ00174 phosphomannomutase; P 97.0 0.001 2.3E-08 66.7 6.2 45 16-82 5-49 (247)
294 TIGR01689 EcbF-BcbF capsule bi 97.0 0.0016 3.4E-08 59.3 6.7 50 17-82 2-51 (126)
295 KOG2630|consensus 97.0 0.0037 8.1E-08 61.9 9.1 97 51-151 119-224 (254)
296 KOG2961|consensus 96.9 0.0045 9.9E-08 57.7 8.6 116 15-156 42-172 (190)
297 TIGR02463 MPGP_rel mannosyl-3- 96.9 0.0026 5.6E-08 62.2 7.6 64 84-147 151-218 (221)
298 TIGR01486 HAD-SF-IIB-MPGP mann 96.9 0.01 2.2E-07 59.6 11.9 59 305-364 4-69 (256)
299 TIGR01497 kdpB K+-transporting 96.9 0.0039 8.4E-08 71.4 9.8 106 55-175 446-551 (675)
300 PRK14010 potassium-transportin 96.9 0.0042 9.1E-08 71.1 10.1 107 55-176 441-547 (673)
301 PRK15126 thiamin pyrimidine py 96.9 0.0032 7E-08 63.7 8.3 199 304-521 6-232 (272)
302 PRK01122 potassium-transportin 96.9 0.0049 1.1E-07 70.7 10.4 107 55-176 445-551 (679)
303 PRK10976 putative hydrolase; P 96.9 0.0092 2E-07 60.0 11.3 50 471-521 183-234 (266)
304 PF08645 PNK3P: Polynucleotide 96.8 0.0023 5E-08 60.3 5.7 93 424-516 30-153 (159)
305 COG3700 AphA Acid phosphatase 96.8 0.0016 3.5E-08 62.1 4.5 130 16-152 63-212 (237)
306 PF05152 DUF705: Protein of un 96.8 0.0037 7.9E-08 63.9 7.3 68 15-102 121-188 (297)
307 COG2217 ZntA Cation transport 96.7 0.0036 7.8E-08 72.0 8.1 106 55-175 537-642 (713)
308 TIGR02471 sucr_syn_bact_C sucr 96.7 0.0082 1.8E-07 59.5 9.3 44 476-520 159-202 (236)
309 PRK03669 mannosyl-3-phosphogly 96.7 0.024 5.2E-07 57.5 12.8 54 304-358 11-69 (271)
310 PRK14502 bifunctional mannosyl 96.7 0.0033 7.2E-08 71.4 7.0 58 16-96 416-473 (694)
311 PRK10513 sugar phosphate phosp 96.7 0.012 2.6E-07 59.3 10.5 45 476-521 196-240 (270)
312 TIGR01116 ATPase-IIA1_Ca sarco 96.5 0.0087 1.9E-07 71.1 9.7 99 421-521 535-658 (917)
313 KOG1615|consensus 96.5 0.01 2.2E-07 57.6 8.2 97 418-518 83-198 (227)
314 TIGR01524 ATPase-IIIB_Mg magne 96.3 0.016 3.4E-07 68.6 10.2 115 55-178 515-648 (867)
315 TIGR01647 ATPase-IIIA_H plasma 96.3 0.016 3.5E-07 67.5 9.8 117 55-180 442-582 (755)
316 PF08235 LNS2: LNS2 (Lipin/Ned 96.3 0.029 6.2E-07 53.0 9.6 117 18-146 1-141 (157)
317 PRK10517 magnesium-transportin 96.2 0.018 3.8E-07 68.4 9.3 116 55-179 550-684 (902)
318 TIGR02245 HAD_IIID1 HAD-superf 96.1 0.018 3.8E-07 56.3 7.6 112 16-146 21-151 (195)
319 PRK14501 putative bifunctional 96.1 0.021 4.7E-07 66.2 9.6 61 15-93 491-552 (726)
320 KOG2630|consensus 96.1 0.02 4.4E-07 56.8 7.8 96 422-520 122-225 (254)
321 TIGR01497 kdpB K+-transporting 96.0 0.012 2.6E-07 67.4 7.0 92 422-521 445-536 (675)
322 PLN02205 alpha,alpha-trehalose 96.0 0.042 9.1E-07 64.8 11.4 56 15-90 595-651 (854)
323 TIGR02245 HAD_IIID1 HAD-superf 96.0 0.029 6.3E-07 54.8 8.4 114 382-516 19-153 (195)
324 TIGR01517 ATPase-IIB_Ca plasma 95.9 0.045 9.8E-07 65.4 11.4 114 55-177 579-714 (941)
325 PRK15122 magnesium-transportin 95.9 0.03 6.5E-07 66.5 9.5 113 55-176 550-681 (903)
326 KOG3120|consensus 95.8 0.021 4.5E-07 56.5 6.3 101 421-524 82-215 (256)
327 PF08282 Hydrolase_3: haloacid 95.7 0.018 4E-07 55.9 5.9 194 306-521 4-230 (254)
328 KOG3040|consensus 95.6 0.073 1.6E-06 52.3 9.4 41 481-521 187-228 (262)
329 PF05761 5_nucleotid: 5' nucle 95.5 0.069 1.5E-06 58.5 9.7 100 422-523 182-328 (448)
330 COG2217 ZntA Cation transport 95.5 0.029 6.3E-07 64.7 7.1 86 421-513 535-620 (713)
331 PLN02887 hydrolase family prot 95.4 0.089 1.9E-06 59.5 10.5 50 471-521 500-551 (580)
332 PLN02423 phosphomannomutase 95.4 0.027 5.8E-07 56.7 5.7 37 491-527 199-239 (245)
333 PF06941 NT5C: 5' nucleotidase 95.3 0.024 5.2E-07 54.6 5.0 91 420-524 70-167 (191)
334 TIGR01675 plant-AP plant acid 95.2 0.097 2.1E-06 52.4 9.1 138 382-522 75-225 (229)
335 PRK14502 bifunctional mannosyl 95.2 0.29 6.3E-06 56.1 13.8 208 301-517 417-656 (694)
336 PF05152 DUF705: Protein of un 95.2 0.051 1.1E-06 55.7 7.0 72 378-469 116-187 (297)
337 TIGR01523 ATPase-IID_K-Na pota 95.0 0.16 3.6E-06 61.3 11.9 113 55-176 646-790 (1053)
338 KOG0207|consensus 95.0 0.062 1.3E-06 62.4 7.7 85 54-145 722-806 (951)
339 COG3769 Predicted hydrolase (H 94.9 0.064 1.4E-06 53.1 6.5 59 14-96 5-63 (274)
340 PF03767 Acid_phosphat_B: HAD 94.7 0.022 4.7E-07 57.0 3.0 133 382-521 70-224 (229)
341 PRK01122 potassium-transportin 94.6 0.13 2.8E-06 59.3 9.0 86 423-515 445-530 (679)
342 PRK14010 potassium-transportin 94.4 0.13 2.9E-06 59.1 8.8 87 422-515 440-526 (673)
343 COG2503 Predicted secreted aci 94.4 0.3 6.4E-06 49.2 10.0 125 378-509 74-210 (274)
344 COG0474 MgtA Cation transport 94.3 0.23 5E-06 59.2 10.7 118 54-179 546-686 (917)
345 TIGR01106 ATPase-IIC_X-K sodiu 94.1 0.33 7.1E-06 58.5 11.6 115 55-178 568-730 (997)
346 KOG2470|consensus 94.1 0.05 1.1E-06 57.0 3.9 93 57-151 242-375 (510)
347 PLN03017 trehalose-phosphatase 93.9 0.068 1.5E-06 57.0 4.7 55 17-90 112-166 (366)
348 TIGR01494 ATPase_P-type ATPase 93.5 0.26 5.7E-06 54.6 8.5 83 54-146 346-428 (499)
349 PLN02151 trehalose-phosphatase 93.5 0.077 1.7E-06 56.4 4.1 56 17-91 99-154 (354)
350 TIGR01658 EYA-cons_domain eyes 93.3 0.35 7.6E-06 48.7 8.1 85 72-157 176-263 (274)
351 KOG0202|consensus 93.3 0.32 6.9E-06 56.3 8.8 123 54-185 583-732 (972)
352 PLN02580 trehalose-phosphatase 93.1 0.094 2E-06 56.3 4.2 57 17-92 120-176 (384)
353 KOG1618|consensus 93.1 0.12 2.6E-06 53.8 4.7 102 17-149 36-144 (389)
354 PF05116 S6PP: Sucrose-6F-phos 92.9 0.69 1.5E-05 46.6 10.0 46 108-154 165-210 (247)
355 TIGR01647 ATPase-IIIA_H plasma 92.7 0.3 6.6E-06 57.1 7.9 99 421-521 440-562 (755)
356 COG5663 Uncharacterized conser 92.7 0.29 6.3E-06 46.6 6.3 96 54-158 71-168 (194)
357 COG2216 KdpB High-affinity K+ 92.7 0.28 6E-06 54.1 7.0 95 56-158 448-542 (681)
358 TIGR01524 ATPase-IIIB_Mg magne 92.7 0.43 9.2E-06 56.7 9.2 98 422-521 514-630 (867)
359 PF13344 Hydrolase_6: Haloacid 92.3 0.25 5.5E-06 42.9 5.1 86 422-513 13-100 (101)
360 COG4030 Uncharacterized protei 92.2 0.88 1.9E-05 45.5 9.2 42 52-95 80-121 (315)
361 TIGR00685 T6PP trehalose-phosp 92.2 0.82 1.8E-05 45.7 9.3 46 476-521 167-219 (244)
362 PF06189 5-nucleotidase: 5'-nu 91.9 0.67 1.4E-05 47.2 8.2 127 19-155 124-262 (264)
363 TIGR01517 ATPase-IIB_Ca plasma 91.8 0.52 1.1E-05 56.5 8.7 94 421-515 577-691 (941)
364 KOG2134|consensus 91.6 0.31 6.7E-06 52.0 5.7 109 15-134 74-201 (422)
365 TIGR01484 HAD-SF-IIB HAD-super 91.4 0.19 4E-06 48.4 3.6 41 476-516 163-203 (204)
366 PRK10517 magnesium-transportin 91.4 0.47 1E-05 56.6 7.6 93 422-515 549-660 (902)
367 PRK12702 mannosyl-3-phosphogly 91.3 0.41 9E-06 49.7 6.1 42 425-467 20-61 (302)
368 smart00775 LNS2 LNS2 domain. T 91.2 1.7 3.7E-05 40.8 9.8 92 423-515 27-142 (157)
369 PLN02177 glycerol-3-phosphate 91.1 2 4.3E-05 47.9 11.7 90 56-152 111-215 (497)
370 TIGR01680 Veg_Stor_Prot vegeta 91.1 1.2 2.6E-05 45.8 9.1 98 421-521 143-251 (275)
371 TIGR01657 P-ATPase-V P-type AT 90.3 0.99 2.1E-05 54.8 9.0 41 55-96 656-696 (1054)
372 PRK15122 magnesium-transportin 90.2 0.85 1.9E-05 54.4 8.3 98 422-521 549-665 (903)
373 TIGR01494 ATPase_P-type ATPase 89.7 1.2 2.5E-05 49.5 8.4 84 421-514 345-428 (499)
374 TIGR01523 ATPase-IID_K-Na pota 89.7 0.97 2.1E-05 54.8 8.3 94 422-516 645-769 (1053)
375 COG1877 OtsB Trehalose-6-phosp 89.5 0.51 1.1E-05 48.4 4.9 59 15-91 17-76 (266)
376 TIGR01106 ATPase-IIC_X-K sodiu 89.3 1.3 2.8E-05 53.5 9.0 94 422-516 567-707 (997)
377 PLN02382 probable sucrose-phos 89.3 1.3 2.8E-05 48.3 8.1 46 476-521 175-223 (413)
378 KOG0207|consensus 89.3 0.91 2E-05 53.2 7.2 82 419-507 719-800 (951)
379 COG4850 Uncharacterized conser 89.2 2 4.4E-05 45.0 9.0 115 18-139 163-293 (373)
380 PF05822 UMPH-1: Pyrimidine 5' 89.2 0.89 1.9E-05 46.1 6.3 114 421-537 88-224 (246)
381 KOG3189|consensus 88.7 0.64 1.4E-05 45.5 4.7 58 18-102 13-72 (252)
382 COG3700 AphA Acid phosphatase 88.1 0.88 1.9E-05 43.9 5.1 92 424-521 115-213 (237)
383 TIGR01652 ATPase-Plipid phosph 87.5 1.5 3.3E-05 53.2 8.0 41 54-95 630-670 (1057)
384 KOG2882|consensus 87.1 1.1 2.5E-05 46.4 5.7 50 476-525 225-275 (306)
385 KOG3107|consensus 86.1 3.6 7.8E-05 44.0 8.7 90 71-162 370-462 (468)
386 PF02358 Trehalose_PPase: Treh 86.0 0.54 1.2E-05 46.7 2.6 46 20-82 1-47 (235)
387 PF06189 5-nucleotidase: 5'-nu 85.3 2 4.3E-05 43.8 6.2 91 421-524 158-263 (264)
388 KOG1605|consensus 84.8 0.15 3.4E-06 51.9 -1.9 127 16-146 89-223 (262)
389 PF05116 S6PP: Sucrose-6F-phos 84.4 4.7 0.0001 40.6 8.6 75 428-521 133-209 (247)
390 PLN03063 alpha,alpha-trehalose 84.0 1.3 2.9E-05 52.1 5.0 62 16-92 507-569 (797)
391 PLN02589 caffeoyl-CoA O-methyl 83.7 0.72 1.6E-05 46.8 2.3 65 210-277 78-143 (247)
392 PLN03064 alpha,alpha-trehalose 83.6 1.3 2.8E-05 52.9 4.7 69 16-93 591-660 (934)
393 COG5610 Predicted hydrolase (H 83.0 3.5 7.6E-05 45.1 7.2 95 54-150 96-201 (635)
394 PF01596 Methyltransf_3: O-met 82.6 0.76 1.6E-05 45.3 1.9 65 210-277 44-109 (205)
395 TIGR01658 EYA-cons_domain eyes 81.4 5.9 0.00013 40.2 7.7 68 460-527 195-265 (274)
396 PRK10187 trehalose-6-phosphate 79.5 3.8 8.2E-05 41.7 5.9 48 476-523 174-224 (266)
397 TIGR01657 P-ATPase-V P-type AT 79.2 6.7 0.00015 47.8 8.8 41 423-464 656-696 (1054)
398 PLN02423 phosphomannomutase 78.6 2.8 6.1E-05 42.1 4.6 44 16-82 6-50 (245)
399 KOG0323|consensus 78.0 2.3 5E-05 48.5 4.1 82 419-504 197-282 (635)
400 KOG1605|consensus 77.1 0.79 1.7E-05 46.8 0.1 99 422-523 130-232 (262)
401 COG4030 Uncharacterized protei 76.4 10 0.00022 38.2 7.4 51 411-463 71-121 (315)
402 PF05822 UMPH-1: Pyrimidine 5' 75.5 6.5 0.00014 39.9 6.1 123 51-178 86-235 (246)
403 COG0474 MgtA Cation transport 75.2 11 0.00023 45.4 8.9 99 420-519 544-665 (917)
404 PLN03190 aminophospholipid tra 74.1 11 0.00024 46.5 8.7 36 55-91 726-761 (1178)
405 KOG0204|consensus 73.5 12 0.00025 44.2 8.1 111 54-175 646-782 (1034)
406 KOG2469|consensus 71.9 5.8 0.00013 42.8 4.9 93 58-152 201-334 (424)
407 PF06437 ISN1: IMP-specific 5' 70.5 7.5 0.00016 41.7 5.4 49 15-83 146-194 (408)
408 TIGR01652 ATPase-Plipid phosph 68.8 28 0.0006 42.6 10.5 42 422-464 630-671 (1057)
409 PLN02476 O-methyltransferase 67.8 4 8.7E-05 42.1 2.7 66 210-278 117-183 (278)
410 COG5083 SMP2 Uncharacterized p 67.5 6.5 0.00014 42.9 4.2 118 16-146 375-516 (580)
411 TIGR02495 NrdG2 anaerobic ribo 67.1 32 0.00069 32.6 8.6 107 418-534 69-179 (191)
412 COG2216 KdpB High-affinity K+ 66.1 20 0.00043 40.2 7.6 84 423-513 447-530 (681)
413 KOG0202|consensus 65.7 21 0.00045 42.1 8.0 92 422-514 583-699 (972)
414 KOG2832|consensus 64.2 25 0.00054 37.7 7.6 102 379-500 184-291 (393)
415 KOG4584|consensus 64.0 2 4.2E-05 44.6 -0.4 257 228-525 48-332 (348)
416 KOG2116|consensus 61.8 12 0.00025 42.9 4.9 119 16-147 530-673 (738)
417 COG0731 Fe-S oxidoreductases [ 61.0 24 0.00052 36.9 6.8 40 50-90 87-127 (296)
418 PF08235 LNS2: LNS2 (Lipin/Ned 60.2 52 0.0011 31.2 8.4 115 386-515 1-142 (157)
419 PLN02499 glycerol-3-phosphate 59.9 17 0.00038 40.4 5.9 33 63-97 101-134 (498)
420 TIGR02329 propionate_PrpR prop 59.4 41 0.00088 38.0 8.9 101 425-532 80-184 (526)
421 cd01994 Alpha_ANH_like_IV This 58.3 55 0.0012 31.8 8.5 109 63-174 15-144 (194)
422 PLN02781 Probable caffeoyl-CoA 57.8 7.9 0.00017 38.7 2.7 65 210-277 67-132 (234)
423 KOG2470|consensus 57.7 14 0.00029 39.5 4.3 97 422-520 239-376 (510)
424 COG0036 Rpe Pentose-5-phosphat 57.1 76 0.0017 31.8 9.3 111 423-537 93-216 (220)
425 COG4122 Predicted O-methyltran 55.3 10 0.00022 37.9 2.9 75 210-287 58-135 (219)
426 KOG3128|consensus 55.1 27 0.00059 35.7 5.9 92 51-143 134-247 (298)
427 KOG3107|consensus 54.8 48 0.001 35.8 7.8 93 438-533 369-465 (468)
428 PRK08883 ribulose-phosphate 3- 53.6 35 0.00075 34.0 6.4 108 426-536 93-213 (220)
429 PTZ00174 phosphomannomutase; P 52.8 16 0.00035 36.5 4.0 41 108-152 188-232 (247)
430 TIGR03679 arCOG00187 arCOG0018 51.9 95 0.0021 30.7 9.2 108 63-173 13-141 (218)
431 KOG0206|consensus 51.5 45 0.00098 41.0 8.0 37 53-90 649-685 (1151)
432 COG0731 Fe-S oxidoreductases [ 51.2 17 0.00037 37.9 3.9 32 312-343 91-123 (296)
433 PRK08091 ribulose-phosphate 3- 49.5 96 0.0021 31.2 8.8 106 426-536 103-225 (228)
434 cd04728 ThiG Thiazole synthase 48.6 1.2E+02 0.0027 30.9 9.4 99 51-156 100-209 (248)
435 PF06506 PrpR_N: Propionate ca 47.3 23 0.00049 33.7 3.8 89 56-154 59-153 (176)
436 PRK05928 hemD uroporphyrinogen 47.2 1.2E+02 0.0025 29.6 9.0 58 476-535 187-248 (249)
437 PRK15424 propionate catabolism 46.1 98 0.0021 35.1 9.2 87 428-521 96-182 (538)
438 PRK11840 bifunctional sulfur c 45.8 1.1E+02 0.0024 32.4 8.8 99 51-155 174-282 (326)
439 PLN02334 ribulose-phosphate 3- 45.3 1.3E+02 0.0029 29.6 9.1 109 426-536 102-220 (229)
440 TIGR01689 EcbF-BcbF capsule bi 44.9 34 0.00074 31.1 4.4 28 423-450 24-51 (126)
441 TIGR02329 propionate_PrpR prop 44.8 82 0.0018 35.6 8.3 87 60-153 86-172 (526)
442 TIGR03470 HpnH hopanoid biosyn 44.2 55 0.0012 34.2 6.5 34 416-449 77-110 (318)
443 KOG0203|consensus 43.5 36 0.00079 40.2 5.2 40 55-95 590-629 (1019)
444 PRK00208 thiG thiazole synthas 43.5 1.7E+02 0.0038 29.9 9.5 99 51-156 100-209 (250)
445 KOG3128|consensus 43.2 41 0.0009 34.5 5.0 115 421-536 136-272 (298)
446 COG0761 lytB 4-Hydroxy-3-methy 42.7 53 0.0012 34.1 5.8 44 111-158 228-271 (294)
447 PLN02951 Molybderin biosynthes 42.6 85 0.0018 33.7 7.7 46 418-464 113-161 (373)
448 COG4502 5'(3')-deoxyribonucleo 42.5 32 0.0007 32.2 3.8 76 51-141 64-144 (180)
449 PLN03190 aminophospholipid tra 42.0 87 0.0019 38.9 8.6 35 423-458 726-760 (1178)
450 KOG1424|consensus 41.4 19 0.00041 40.3 2.5 88 367-460 347-463 (562)
451 PRK08005 epimerase; Validated 41.1 1.6E+02 0.0035 29.2 8.8 107 426-535 93-208 (210)
452 PRK13361 molybdenum cofactor b 41.1 90 0.002 32.7 7.5 46 419-464 69-116 (329)
453 PLN02580 trehalose-phosphatase 41.1 30 0.00064 37.5 3.9 123 315-460 48-176 (384)
454 PF02350 Epimerase_2: UDP-N-ac 40.1 2E+02 0.0042 30.5 9.9 112 59-185 201-314 (346)
455 KOG0209|consensus 39.0 58 0.0013 38.6 5.9 42 53-95 673-714 (1160)
456 COG0761 lytB 4-Hydroxy-3-methy 38.2 59 0.0013 33.8 5.3 143 373-527 105-272 (294)
457 PF04413 Glycos_transf_N: 3-De 38.0 1.4E+02 0.0031 28.7 7.8 94 426-526 35-132 (186)
458 cd07043 STAS_anti-anti-sigma_f 37.5 96 0.0021 25.3 5.8 58 16-100 38-96 (99)
459 KOG2832|consensus 37.3 76 0.0016 34.1 6.1 102 16-135 189-294 (393)
460 TIGR02468 sucrsPsyn_pln sucros 36.6 1.6E+02 0.0035 36.1 9.4 46 107-153 955-1002(1050)
461 PF00532 Peripla_BP_1: Peripla 36.5 1.7E+02 0.0037 29.6 8.6 170 318-511 20-199 (279)
462 KOG0323|consensus 36.5 46 0.00099 38.3 4.6 81 52-136 198-282 (635)
463 PRK08745 ribulose-phosphate 3- 36.2 2.1E+02 0.0047 28.5 8.9 106 426-536 97-217 (223)
464 PF06506 PrpR_N: Propionate ca 36.1 32 0.0007 32.6 2.9 99 424-531 59-160 (176)
465 PF04227 Indigoidine_A: Indigo 36.0 28 0.0006 36.3 2.6 44 213-266 134-177 (293)
466 PF06258 Mito_fiss_Elm1: Mitoc 35.9 2.7E+02 0.0058 29.2 10.0 92 436-533 179-270 (311)
467 COG5663 Uncharacterized conser 35.3 89 0.0019 30.2 5.6 92 422-525 71-167 (194)
468 TIGR02668 moaA_archaeal probab 34.6 1.2E+02 0.0025 31.1 7.1 47 418-464 63-110 (302)
469 TIGR03470 HpnH hopanoid biosyn 34.4 2.2E+02 0.0048 29.7 9.1 32 51-82 80-111 (318)
470 PTZ00170 D-ribulose-5-phosphat 34.0 2.1E+02 0.0045 28.5 8.5 108 428-536 103-219 (228)
471 TIGR03679 arCOG00187 arCOG0018 33.9 3.4E+02 0.0075 26.7 10.0 98 431-530 13-130 (218)
472 KOG0741|consensus 33.6 83 0.0018 35.7 5.9 130 342-490 549-687 (744)
473 PRK13762 tRNA-modifying enzyme 33.6 55 0.0012 34.4 4.5 60 52-117 139-199 (322)
474 COG0514 RecQ Superfamily II DN 33.5 5.8E+02 0.013 29.4 12.7 189 319-536 71-278 (590)
475 COG3423 Nlp Predicted transcri 33.4 26 0.00056 29.3 1.5 46 317-366 9-68 (82)
476 COG3769 Predicted hydrolase (H 31.9 1.2E+02 0.0025 30.8 6.0 36 428-464 28-63 (274)
477 PRK08005 epimerase; Validated 31.7 2.4E+02 0.0051 28.0 8.3 91 58-151 93-191 (210)
478 CHL00162 thiG thiamin biosynth 31.3 3.5E+02 0.0075 27.9 9.4 99 51-155 114-222 (267)
479 PRK13940 glutamyl-tRNA reducta 31.2 31 0.00068 37.6 2.2 118 318-440 193-334 (414)
480 PRK10344 DNA-binding transcrip 31.0 30 0.00065 29.8 1.6 45 317-365 9-67 (92)
481 PRK15424 propionate catabolism 30.8 1.7E+02 0.0036 33.3 7.9 87 60-153 96-182 (538)
482 TIGR02886 spore_II_AA anti-sig 30.1 54 0.0012 27.9 3.1 42 318-365 60-101 (106)
483 COG0036 Rpe Pentose-5-phosphat 29.1 2.7E+02 0.0059 28.0 8.1 99 54-152 92-198 (220)
484 PF02606 LpxK: Tetraacyldisacc 29.0 1.9E+02 0.0042 30.5 7.6 178 316-500 52-261 (326)
485 TIGR02109 PQQ_syn_pqqE coenzym 28.5 1.9E+02 0.0041 30.4 7.5 46 418-464 60-107 (358)
486 PF08704 GCD14: tRNA methyltra 28.4 24 0.00053 35.8 0.8 118 215-355 44-163 (247)
487 PRK05301 pyrroloquinoline quin 28.0 1.6E+02 0.0035 31.2 7.0 46 418-464 69-116 (378)
488 TIGR02826 RNR_activ_nrdG3 anae 27.9 65 0.0014 30.0 3.5 36 423-458 72-107 (147)
489 COG1546 CinA Uncharacterized p 27.3 1E+02 0.0022 29.5 4.6 48 428-475 10-57 (162)
490 cd00733 GlyRS_alpha_core Class 26.9 52 0.0011 33.6 2.7 86 63-148 38-129 (279)
491 cd03174 DRE_TIM_metallolyase D 26.8 4.1E+02 0.0088 26.2 9.3 108 424-536 49-186 (265)
492 cd07041 STAS_RsbR_RsbS_like Su 26.7 99 0.0021 26.3 4.2 38 60-100 62-100 (109)
493 cd06578 HemD Uroporphyrinogen- 26.7 2.8E+02 0.006 26.5 7.9 104 426-534 8-118 (239)
494 PF04007 DUF354: Protein of un 26.5 1.9E+02 0.0042 30.7 7.1 86 429-521 17-112 (335)
495 PF05690 ThiG: Thiazole biosyn 26.4 2.9E+02 0.0063 28.2 7.8 97 51-153 100-206 (247)
496 TIGR02666 moaA molybdenum cofa 26.2 1.7E+02 0.0036 30.6 6.5 46 419-464 67-114 (334)
497 PRK09348 glyQ glycyl-tRNA synt 25.5 53 0.0011 33.6 2.5 38 111-148 93-133 (283)
498 TIGR00388 glyQ glycyl-tRNA syn 25.4 58 0.0013 33.5 2.8 86 63-148 39-130 (293)
499 PRK00881 purH bifunctional pho 25.3 1.8E+02 0.0039 32.8 6.8 67 425-498 14-102 (513)
500 PRK13762 tRNA-modifying enzyme 25.3 93 0.002 32.8 4.4 37 421-457 140-176 (322)
No 1
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.97 E-value=2.4e-30 Score=244.65 Aligned_cols=152 Identities=39% Similarity=0.659 Sum_probs=119.1
Q ss_pred CccceEEeecC-----CCCcCCC-CCCcccccccccc-hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHH
Q psy8912 382 KYKDMVFFDDE-----ERNARSI-SKLGVIGIQVHRD-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA 454 (538)
Q Consensus 382 ~~~~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~-~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a 454 (538)
++|.|+||||| +...+-+ |||+.. ..+ .++|++|+++.+||+|+++|++|+++|+++|+||+|++|++|
T Consensus 1 ~~PklvvFDLD~TlW~~~~~~~~~~Pf~~~----~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A 76 (169)
T PF12689_consen 1 RLPKLVVFDLDYTLWPPWMDTHVGPPFKKI----SNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWA 76 (169)
T ss_dssp TS-SEEEE-STTTSSSS-TTTSS-S-EEE-----TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHH
T ss_pred CCCcEEEEcCcCCCCchhHhhccCCCceec----CCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHH
Confidence 58999999999 7777777 799954 444 899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCc----------cccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 455 HQLVDLFNWN----------QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 455 ~~~L~~lgL~----------~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+++|+.|++. +||++.+|++++|..||.++.+++|++++++|||||+.++++.+++.|++|+.|++|+|+
T Consensus 77 ~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 77 RELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--H
T ss_pred HHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCH
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy8912 525 SVLHKGLKQWASK 537 (538)
Q Consensus 525 ~~~~~~l~~~~~~ 537 (538)
+.|++||++|++|
T Consensus 157 ~~~~~gL~~~~~k 169 (169)
T PF12689_consen 157 DEFERGLEKFRKK 169 (169)
T ss_dssp HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999986
No 2
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.90 E-value=1.1e-23 Score=200.51 Aligned_cols=152 Identities=20% Similarity=0.327 Sum_probs=127.7
Q ss_pred ccceEEeecC-----CCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 383 YKDMVFFDDE-----ERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 383 ~~~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
+|.|+||||| |.++|-+ +|++.+ .-....+.+..+..+.+||||.++|++|+++|++++|+|++...+.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPV--KQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYE 78 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceec--cCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHH
Confidence 6899999999 9999888 688733 4455568999999999999999999999999999999998834568899
Q ss_pred HHhhcCCc---------cccccceeecC-CchHHHHHHHHH----h--CCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 457 LVDLFNWN---------QHFDHKEIFPG-QKTTHFANLKKA----T--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 457 ~L~~lgL~---------~yFd~~~i~~~-~k~~~~~kal~~----l--gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+|+.+++. +||+...+... .++.+...++++ + |++|++|+||||+..|+++|+++|+.++++++
T Consensus 79 ~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 79 ILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred HHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 99999999 99995333222 333333333333 3 69999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh
Q psy8912 521 GMSHSVLHKGLKQWAS 536 (538)
Q Consensus 521 g~t~~~~~~~l~~~~~ 536 (538)
|.+..+|.++||+|++
T Consensus 159 g~~~~~~~~~~~~~~~ 174 (174)
T TIGR01685 159 GMDKGTFKKILEMWRS 174 (174)
T ss_pred CccHHHHHHHHHHhcC
Confidence 9999999999999984
No 3
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.87 E-value=7.8e-22 Score=232.37 Aligned_cols=167 Identities=19% Similarity=0.174 Sum_probs=137.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC-CCCccee---ec--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKE---IY--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~-~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
.++||+.++|++|+++|++++|+||+.. ..++..++.+|+. .+|+.+. .. .+++|++|..+++++|++|++|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~-~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADR-IKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 4799999999999999999999999988 8999999999996 7899872 22 34567999999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhcCCcccccc-c---ccccccccc
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKLGVTATRKD-S---KIKYKDMVF 204 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~g~~~~~~~-~---~~~~~~~~~ 204 (538)
||||+..|+++|+++||++|+|.++... . .+....+++++.+..+..+.++...|...+..- | .-.-++...
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~---~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSE-E---ILKDAGPSLIRKDIGNISLSDILTGGSDATPNVTGMDWINTILDTGS 315 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCH-H---HHhhCCCCEEECChHHCCHHHHHhcCCCCCCCccchhhhcccccccc
Confidence 9999999999999999999999998632 2 344567899999988888877766665543222 2 233344445
Q ss_pred ccccccccchhhcccceeeeee
Q psy8912 205 FDDEERNARSISKLGVIGIQVM 226 (538)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~ 226 (538)
.-+.+++||+|||||||||++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ 337 (1057)
T PLN02919 316 ILGFQGSRRDILRYGSLGIALS 337 (1057)
T ss_pred ccCcccchhhhhhhhhhhhhhh
Confidence 5699999999999999999964
No 4
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.84 E-value=2.9e-21 Score=182.86 Aligned_cols=150 Identities=47% Similarity=0.793 Sum_probs=116.9
Q ss_pred CCceEEEeCCCCCChhhHhhhh-chhHHHHH--HHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIGQ--KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~--~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
.||+|+||+|+|||+.|++.+. +|++.... .+.++....+.+||++.++|+.|+++|++++++|.++.|+.++.+|+
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence 3799999999999999999999 99988884 57788899999999999999999999999999998888899999999
Q ss_pred HcCCC----------CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 92 LINLN----------QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 92 ~lgL~----------~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
.+++. ++|+..++++++|...|..+.++.|+++++++||+|...++...++.|+.|++|..|.+...+.+
T Consensus 82 ~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~ 161 (169)
T PF12689_consen 82 LLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER 161 (169)
T ss_dssp HTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred hcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999888877
Q ss_pred hhC
Q psy8912 162 ATG 164 (538)
Q Consensus 162 ~l~ 164 (538)
++.
T Consensus 162 gL~ 164 (169)
T PF12689_consen 162 GLE 164 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.84 E-value=4.2e-20 Score=184.98 Aligned_cols=121 Identities=11% Similarity=0.135 Sum_probs=104.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+.+ +. .++++|++|..+++++|++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR-ENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 4578999999999999999999999999988 9999999999999999987 22 2345668999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
|+||||+..|+++|+++|+.+|+|.+|... . .+....+++++.+..+
T Consensus 184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~---~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-S---LLMEAKPTFLIKDYED 230 (248)
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-H---HHhhcCCCEEeccchh
Confidence 999999999999999999999999998532 2 2334578898887655
No 6
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.83 E-value=4e-20 Score=180.06 Aligned_cols=121 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..||+.+.. . .+++|++|..+++++|++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMR-DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 4567999999999999999999999999988 899999999999999998722 2 345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+.+|+++|+++|+.+++|.||......+. ...+++++.+..
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~---~~~~~~~i~~~~ 204 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLE---QYKPDFMLDKMS 204 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHh---hcCcCEEECCHH
Confidence 99999999999999999999999999976554333 345788877644
No 7
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.83 E-value=1e-20 Score=180.19 Aligned_cols=147 Identities=28% Similarity=0.438 Sum_probs=120.0
Q ss_pred CCceEEEeCCCCCChhhHhhhh-chhHHHH---HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCC-CcHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLV-APFKKIG---QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT-SEILHAKQI 89 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~---~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~-~~p~~~~~~ 89 (538)
+|++|+||+|+|||.+.+.++. ++++... +.+.+.......+|||+.++|+.|+++|++++|+||+ .. ..++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~-~~~~~~ 79 (174)
T TIGR01685 1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVP-EWAYEI 79 (174)
T ss_pred CCcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCCh-HHHHHH
Confidence 4799999999999999988888 6666433 2344556778899999999999999999999999998 66 888999
Q ss_pred HHHcCCC---------CCCcceeecCC---CCH--HHHHHHHHHc--CCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 90 LNLINLN---------QYFSNKEIYPG---QKT--THFESLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 90 L~~lgL~---------~~Fd~ie~~~~---~Kp--~~f~~ale~l--gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
++.+++. ++|+.+..... +|| .++..+.+.+ |++|++|+||||+..|+++|+++|+.++++.+|
T Consensus 80 L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 80 LGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSG 159 (174)
T ss_pred HHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCC
Confidence 9999998 99998633222 232 3345554555 799999999999999999999999999999999
Q ss_pred CCchHhHHh
Q psy8912 154 MSSGRLKEA 162 (538)
Q Consensus 154 ~~~~~~~~~ 162 (538)
.....+.+.
T Consensus 160 ~~~~~~~~~ 168 (174)
T TIGR01685 160 MDKGTFKKI 168 (174)
T ss_pred ccHHHHHHH
Confidence 877666554
No 8
>COG4996 Predicted phosphatase [General function prediction only]
Probab=99.82 E-value=3e-20 Score=165.50 Aligned_cols=140 Identities=17% Similarity=0.219 Sum_probs=119.5
Q ss_pred ceEEeecC-----CCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 385 DMVFFDDE-----ERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 385 ~l~~~Dld-----h~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
+++|||+| |+|+|++ |||+.+ +.+.+.|+.|.++.|||.|.++|+|++..|+.++.+||+. +..|.++|
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rV----s~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~-~~kA~~aL 75 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRV----SSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNF-EDKAIKAL 75 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceec----CccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCc-hHHHHHHH
Confidence 47999999 9999999 899955 9999999999999999999999999999999999999986 67999999
Q ss_pred hhcCCccccccceeecC-CchHHHHHHHHH------hCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHH
Q psy8912 459 DLFNWNQHFDHKEIFPG-QKTTHFANLKKA------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHK 529 (538)
Q Consensus 459 ~~lgL~~yFd~~~i~~~-~k~~~~~kal~~------lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~ 529 (538)
+.+++.+||++..+.+. .|..++.++++. +.++|++++|+||+..++...+..=..|-.+..+.+.+.+.+
T Consensus 76 ral~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~e 153 (164)
T COG4996 76 RALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSE 153 (164)
T ss_pred HHhchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHH
Confidence 99999999999888887 466665555555 468999999999999999999994444445555666655544
No 9
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.82 E-value=7.7e-20 Score=180.77 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=102.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+.+.. ..+++|++|..+++++|++|++
T Consensus 92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 92 TQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred hcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 4578999999999999999999999999988 888889999999999987622 2345678999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+.+|+++|+++|+.+|+|.||...... .+....+++++.+..
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~--~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPSVAALWGYRLHDD--DPLAWQADVLVEQPQ 218 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCc--ChhhcCCCeeeCCHH
Confidence 999999999999999999999999998753221 122346888776543
No 10
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.82 E-value=2e-19 Score=177.05 Aligned_cols=120 Identities=16% Similarity=0.187 Sum_probs=104.4
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cCCC--CHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YPGQ--KTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~~~--Kp~~f~~ale~lgi~P~e~L 128 (538)
..+|||+.++|..|+++|++++|+||++. ..++..++.+|+..+|+.+.. ...+ +|..+..+++++|++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~-~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 58999999999999999999999999999 999999999999999998733 3333 45789999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
||||+.+|+++|+++|+.+++|.||+...+ .+....+|+++.+..+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~---~l~~~~~d~vi~~~~e 212 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSRE---ELAQAGADVVIDSLAE 212 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCc---chhhcCCCEEECCHHH
Confidence 999999999999999999999999985333 2455678998877544
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.81 E-value=2e-19 Score=179.85 Aligned_cols=125 Identities=10% Similarity=-0.005 Sum_probs=104.4
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---ee--cCCCCHHHHHHHHHHcCCC-C
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EI--YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~--~~~~Kp~~f~~ale~lgi~-P 124 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+| +.+ +. ..+++|++|..+++++|+. |
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~ 174 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDV 174 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCc
Confidence 4568999999999999999999999999988 8999999999999986 765 22 2345679999999999995 9
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----h----------------HhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----G----------------RLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~----------------~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|+||||+..|+++|+++|+.+|+|.+|... . .....+...+||+|+.+..+
T Consensus 175 ~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~e 247 (253)
T TIGR01422 175 AACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAE 247 (253)
T ss_pred hheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHH
Confidence 99999999999999999999999999998752 1 01234556788998876443
No 12
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.81 E-value=3.2e-19 Score=173.86 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=100.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||+.. ..+...++.+|+..+|+.+. .. .+++|++|..+++++|++|++
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLP-VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 3468999999999999999999999999987 88899999999999999862 22 345568999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. +|+++|+++|+.+|++.++....... .....+++++.+.
T Consensus 170 ~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~--~~~~~~~~~i~~~ 217 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMED--DVYPYPDYEISSL 217 (221)
T ss_pred EEEECCChHHHHHHHHHCCCEEEEECCCCCccccc--ccccCCCeeeCcH
Confidence 99999998 89999999999999999876533211 1223567766553
No 13
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.81 E-value=3e-19 Score=181.77 Aligned_cols=121 Identities=15% Similarity=0.177 Sum_probs=105.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
....+++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+... ..+||+.|..++++++++|++|+
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~-~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l 216 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSR-QNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVM 216 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEE
Confidence 44578899999999999999999999999988 9999999999999999976221 12478999999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
||||+..|+++|+++|+.+|+|.+|......+. ...|++++.+.
T Consensus 217 ~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~---~~~ad~~i~~~ 260 (273)
T PRK13225 217 YVGDETRDVEAARQVGLIAVAVTWGFNDRQSLV---AACPDWLLETP 260 (273)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCHHHHH---HCCCCEEECCH
Confidence 999999999999999999999999987665443 34688887654
No 14
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.80 E-value=1.7e-19 Score=178.08 Aligned_cols=104 Identities=18% Similarity=0.189 Sum_probs=94.1
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---e--ecCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---E--IYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e--~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|..|+++|++++++||+++ ..++..++.+|+.+||+.+ + ..+++.|++|+.+++++|+.|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~-~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPR-RAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChH-HHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 55678999999999999999999999999988 8999999999999999986 1 2234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
+|++|+|+.+++++|+++||.+|++..+..
T Consensus 161 ~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 161 ECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred HeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 999999999999999999999999987544
No 15
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.80 E-value=3.4e-19 Score=172.45 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=104.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+.. .++++|++|..+++++|++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSG-PRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 4578999999999999999999999999988 889999999999999997621 2345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+||||+..|+.+|+++|+.++++.||....+.+ ....+++++.+..
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l---~~~~~~~~~~~~~ 197 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEGDAGEL---LAARPDFLLRKPQ 197 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhh---hhcCCCeeeCCHH
Confidence 9999999999999999999999999998765543 3456888876643
No 16
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.80 E-value=5.1e-19 Score=178.86 Aligned_cols=121 Identities=13% Similarity=0.125 Sum_probs=102.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..+...++.+|+..||+.+. .. .+++|++|..+++++|++|++|
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPR-RYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCH-HHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 567899999999999999999999999988 89999999999999999872 22 3456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
+||||+..|+++|+++||.+|+|. |...... +. .+++++.+..+...
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~---l~--~ad~vi~~~~el~~ 232 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYE---LS--AGDLVVRRLDDLSV 232 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEe-cCCchhh---hc--cCCEEeCCHHHHHH
Confidence 999999999999999999999996 5443322 22 47888877655444
No 17
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.80 E-value=6.1e-19 Score=172.89 Aligned_cols=120 Identities=14% Similarity=0.110 Sum_probs=101.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+++..+|+.+.. .++++|++|..+++++|++|+
T Consensus 88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (222)
T PRK10826 88 EETRPLLPGVREALALCKAQGLKIGLASASPL-HMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPL 166 (222)
T ss_pred hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34578999999999999999999999999988 899999999999999998732 234567999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|||+.+|+++|+++|+.+|++.++....+.. ...++.++.+.
T Consensus 167 ~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~----~~~~~~~~~~~ 212 (222)
T PRK10826 167 TCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPR----WALADVKLESL 212 (222)
T ss_pred HeEEEcCChhhHHHHHHcCCEEEEecCCccCchhh----hhhhheeccCH
Confidence 99999999999999999999999998876543321 12356666553
No 18
>PRK11587 putative phosphatase; Provisional
Probab=99.79 E-value=1.1e-18 Score=170.77 Aligned_cols=119 Identities=15% Similarity=0.022 Sum_probs=96.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++|+||++. ......++..++ .+|+.+ +. ..+++|++|..+++++|++|+
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~-~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSV-PVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCc-hHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 34678999999999999999999999999988 777888888888 456654 11 234556899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
+|+||||+..|+++|+++|+.+|+|.++.... ....+++++.+..+
T Consensus 157 ~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~------~~~~~~~~~~~~~e 202 (218)
T PRK11587 157 ECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP------RLDEVDLVLHSLEQ 202 (218)
T ss_pred cEEEEecchhhhHHHHHCCCEEEEECCCCchh------hhccCCEEecchhh
Confidence 99999999999999999999999998765321 12357777766544
No 19
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.79 E-value=1e-18 Score=170.64 Aligned_cols=119 Identities=10% Similarity=0.010 Sum_probs=101.9
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC--CCCcceee-----cCCCCHHHHHHHHHHcCCC-C
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEI-----YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~--~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~-P 124 (538)
...++||+.++|+.|+++|++++|+||+.. ..++..++.+|+. .+|+.+.. ..+++|++|..+++++|+. |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDR-DTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 468999999999999999999999999998 9999999999998 99998722 2335679999999999997 7
Q ss_pred CcEEEEeCCcccHHHHhhcCCeE-EEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTC-IHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~t-I~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
++|+||||+..|+++|+++||.+ +++.+|........ ...+++++.+.
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~---~~~~~~~i~~~ 212 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELS---RHPHTHVLDSV 212 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHh---hcCCceeecCH
Confidence 99999999999999999999999 99998876554433 34577777654
No 20
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.79 E-value=8.5e-19 Score=169.73 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=102.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+|+.+.. . .+++|++|..+++++|++|++|
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 468999999999999999999999999988 899999999999999997622 2 2456789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+||||+.+|+++|+++|+.+++|.+|....... ....+++++.+..
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l---~~~~a~~~i~~~~ 207 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAI---DLLPPDVLYDSLN 207 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEEccCCCCCcch---hhcCCCeEeCCHH
Confidence 999999999999999999999999987654433 2345788776543
No 21
>PRK06769 hypothetical protein; Validated
Probab=99.78 E-value=5.7e-19 Score=167.88 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=110.4
Q ss_pred cCCCCceEEEeCCCCC--ChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------
Q psy8912 12 VKKFPKMVVFDLDYTL--WPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------ 83 (538)
Q Consensus 12 m~~~iKaVIFDlDGTL--w~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------ 83 (538)
|++ +|+++||.|||| |+.+.. ...+.++||+.++|++|+++|++++|+||++..
T Consensus 1 ~~~-~~~~~~d~d~~~~~~~~~~~-----------------~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~ 62 (173)
T PRK06769 1 MTN-IQAIFIDRDGTIGGDTTIHY-----------------PGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIAT 62 (173)
T ss_pred CCC-CcEEEEeCCCcccCCCCCCC-----------------HHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCC
Confidence 455 899999999999 431111 125679999999999999999999999998630
Q ss_pred -HHHHHHHHHcCCCCCCccee------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 84 -LHAKQILNLINLNQYFSNKE------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~ie------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
......++.+|+..+|.... ...+++|++|..++++++++|++|+||||+..|+++|+++|+.+|+|.+|...
T Consensus 63 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 63 IADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred HHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 12344577888877765432 12345679999999999999999999999999999999999999999998754
Q ss_pred hHh---HHhhCCCCCCEEEeCC
Q psy8912 157 GRL---KEATGIDYKDMIYFDD 175 (538)
Q Consensus 157 ~~~---~~~l~~~~~d~Ii~d~ 175 (538)
... .+.+....+++++.+.
T Consensus 143 ~~~~~~~~~l~~~~~~~~~~~~ 164 (173)
T PRK06769 143 DALHTYRDKWAHIEPNYIAENF 164 (173)
T ss_pred hhhhhhhcccccCCCcchhhCH
Confidence 321 1234445677777553
No 22
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.78 E-value=1.4e-18 Score=175.40 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=102.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC-cce---ee--cCCCCHHHHHHHHHHcCCC-C
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNK---EI--YPGQKTTHFESLKKATGIE-Y 124 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F-d~i---e~--~~~~Kp~~f~~ale~lgi~-P 124 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+++..+| +.+ +. ..+++|++|..+++++|+. |
T Consensus 98 ~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~-~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~ 176 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARGIKIGSTTGYTR-EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDV 176 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCC
Confidence 4568999999999999999999999999988 8889999999888875 655 22 2335578999999999996 6
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCc----h----------------HhHHhhCCCCCCEEEeCCch
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS----G----------------RLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~----~----------------~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|+||||+.+|+++|+++|+.+|+|.+|... . ...+.+...++++++.+..+
T Consensus 177 ~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~ 249 (267)
T PRK13478 177 AACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIAD 249 (267)
T ss_pred cceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHH
Confidence 99999999999999999999999999998752 0 01234556688988877443
No 23
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.78 E-value=2.2e-18 Score=181.94 Aligned_cols=124 Identities=11% Similarity=0.111 Sum_probs=105.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..++..++.+|+..||+.+.. ..+++|++|..+++++|+.|++
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3467999999999999999999999999998 999999999999999998722 2345679999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHh
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVND 182 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~ 182 (538)
|+||||+..|+++|+++||.+|+|.++..... + ..+++++.+..+..+..
T Consensus 292 cl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~----l--~~Ad~iI~s~~EL~~~~ 341 (381)
T PLN02575 292 CIVFGNSNQTVEAAHDARMKCVAVASKHPIYE----L--GAADLVVRRLDELSIVD 341 (381)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCChhH----h--cCCCEEECCHHHHHHHH
Confidence 99999999999999999999999987643221 2 24788888766655543
No 24
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.77 E-value=1.8e-18 Score=170.93 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=91.3
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecC--CCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYP--GQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+..+|+.+ +..+ +++|++|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHP-HNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCH-HHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4478999999999999999999999999988 8899999999999999977 2233 34568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCe-EEEECCCCCc
Q psy8912 127 MVFFDDEERNSHDVSPLGVT-CIHSWLMMSS 156 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~-tI~V~~G~~~ 156 (538)
|+||||+..|+++|+++||. +++|.++...
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 99999999999999999997 5778776543
No 25
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.77 E-value=2.8e-18 Score=164.95 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=90.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++|+||++. ..+...++.+|+.++|+.+. .. .+++|++|..+++++|++|++
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~ 167 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSP-AMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE 167 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence 3567899999999999999999999999988 88999999999999999772 22 244568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|++|||+..|+++|+++|+.+|+|..+
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 999999999999999999999999753
No 26
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.77 E-value=4.4e-18 Score=172.93 Aligned_cols=122 Identities=19% Similarity=0.282 Sum_probs=103.2
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+++..+|+.+.. .+ +++|++|+.+++++|++|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~-~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPE-RFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcH-HHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 357899999999999999999999999988 889999999999999997622 22 345689999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
++|||+.+|+++|+++|+.+++|.+|......... ..+++++.+..+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~---~~~~~vi~~l~el 225 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAE---ESPALVIDDLRAL 225 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhh---cCCCEEECCHHHH
Confidence 99999999999999999999999998765444322 4688888765443
No 27
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.76 E-value=8.7e-18 Score=163.92 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=102.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++++||+.. ......++.+|+..+|+.+.. . .+++|++|..++++++++|++|
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 577999999999999999999999999988 888999999999999987621 1 2346789999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|||+.+|+.+|+++|+.+++|.+|....... ....|++++.+..
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~---~~~~~~~~i~~~~ 215 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPI---ALSEPDVVIDHFA 215 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCCCccch---hhcCCCEEECCHH
Confidence 999999999999999999999999987644332 2346888886643
No 28
>PLN02940 riboflavin kinase
Probab=99.76 E-value=9.3e-18 Score=178.48 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=108.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH-HcCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN-LINLNQYFSNKE---I--YPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~-~lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P 124 (538)
.....++||+.++|+.|+++|++++|+||++. ..+...++ ..|+.++|+.+. . ..+++|++|..+++++|++|
T Consensus 89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~-~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p 167 (382)
T PLN02940 89 WCNIKALPGANRLIKHLKSHGVPMALASNSPR-ANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP 167 (382)
T ss_pred HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh
Confidence 34577999999999999999999999999988 88888887 789999999872 2 23455699999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhcCCcccccccc
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKLGVTATRKDSK 196 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~g~~~~~~~~~ 196 (538)
++|++|||+..|+++|+++|+.+|+|.++..... ....++.++.+..+.... +.|+. ...||-
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~-----~~~~ad~~i~sl~el~~~---~~~~~-~~~~~~ 230 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTH-----LYSSADEVINSLLDLQPE---KWGLP-PFNDWI 230 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchh-----hccCccEEeCCHhHcCHH---HcCCC-Cccccc
Confidence 9999999999999999999999999998754322 123578877765543322 25553 456664
No 29
>PRK09449 dUMP phosphatase; Provisional
Probab=99.74 E-value=1.7e-17 Score=162.40 Aligned_cols=116 Identities=12% Similarity=0.019 Sum_probs=94.2
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCC-Cc
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEY-KD 126 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P-~e 126 (538)
...++||+.++|+.|+ +|++++|+||+.. ..++..++.+|+.++|+.+.. ..+++|++|..+++++|+.| ++
T Consensus 93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred cCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 4679999999999999 6799999999988 888999999999999998722 23455689999999999855 89
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. .|+++|+++|+.++++.++... ......+++++.+.
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~-----~~~~~~~~~~i~~~ 215 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNAHGRE-----QPEGIAPTYQVSSL 215 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECCCCCC-----CCCCCCCeEEECCH
Confidence 99999998 6999999999999999854211 11123467776553
No 30
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.74 E-value=1.4e-17 Score=158.36 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++|+ .++|+.|+++ ++++|+||++. ..++..++.+|+.+||+.+. .. .+++|++|..+++++|++|++
T Consensus 85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSES-AIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred ccCCCccH-HHHHHHHHhC-CCEEEEcCCch-HHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 45678885 6999999876 89999999988 99999999999999999872 22 345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
|++|||+..|+++|+++|+++|+|.
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 162 CVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred eEEEeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999999985
No 31
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.74 E-value=1.5e-17 Score=158.64 Aligned_cols=142 Identities=14% Similarity=-0.026 Sum_probs=104.5
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc------------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE------------ 82 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~------------ 82 (538)
|+|+++||+||||...- .. +........++||+.++|++|+++|++++|+||++.
T Consensus 2 ~~~~~~~d~~~t~~~~~-~~------------~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 2 SMKAIFLDRDGVINVDS-DG------------YVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred CccEEEEECCCCcccCC-cc------------ccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 68999999999993211 00 111123567999999999999999999999999862
Q ss_pred --HHHHHHHHHHcCCCCCCccee----------ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 83 --ILHAKQILNLINLNQYFSNKE----------IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 83 --p~~~~~~L~~lgL~~~Fd~ie----------~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
.......++.+|+ +|+.+. ...+++|++|..+++++|++|++|+||||+..|+.+|+++|+.++++
T Consensus 69 ~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v 146 (181)
T PRK08942 69 ALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLV 146 (181)
T ss_pred HHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEE
Confidence 0233455666775 354331 12345568999999999999999999999999999999999999999
Q ss_pred CCCCCchHhHHhhCCCCC--CEEEeCC
Q psy8912 151 WLMMSSGRLKEATGIDYK--DMIYFDD 175 (538)
Q Consensus 151 ~~G~~~~~~~~~l~~~~~--d~Ii~d~ 175 (538)
.+|...... ....+ ++++.+.
T Consensus 147 ~~g~~~~~~----~~~~~~~~~ii~~l 169 (181)
T PRK08942 147 RTGKGVTTL----AEGAAPGTWVLDSL 169 (181)
T ss_pred cCCCCchhh----hcccCCCceeecCH
Confidence 988754322 12234 7776653
No 32
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.74 E-value=1.9e-17 Score=156.57 Aligned_cols=96 Identities=18% Similarity=0.240 Sum_probs=85.0
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---I--YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
...++||+.++|+.|+++|++++|+||+.. ....++.+|+..+|+.+. . .++++|++|..++++++++|++|
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC 161 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 357899999999999999999999999755 567899999999999862 1 23456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
+||||+..|+++|+++||++|+|.
T Consensus 162 v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 162 IGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999873
No 33
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.73 E-value=3.4e-17 Score=159.31 Aligned_cols=116 Identities=9% Similarity=0.004 Sum_probs=97.4
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHc-CCCCCc
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKAT-GIEYKD 126 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~l-gi~P~e 126 (538)
..+++||+.++|+.|+++ ++++|+||+.. ..++..++.+++..+|+.+.. . .+++|++|..+++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~-~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVR-ETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCch-HHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 468999999999999999 99999999988 899999999999999998722 1 245668999999999 999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|+||||+. .|+++|+++|+++|++.++.... .....+++++.+.
T Consensus 173 ~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~-----~~~~~~~~~~~~~ 217 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQNAGLDTCWMNPDMHPN-----PDDIIPTYEIRSL 217 (224)
T ss_pred eEEECCCcHHHHHHHHHCCCcEEEECCCCCCC-----CCCCCCceEECCH
Confidence 99999998 79999999999999998865432 1123566666543
No 34
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.73 E-value=2.9e-17 Score=156.17 Aligned_cols=139 Identities=15% Similarity=0.086 Sum_probs=103.5
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------- 83 (538)
|+++||.||||.... .+. .......++||+.++|+.|+++|++++|+||++..
T Consensus 2 ~~~~~D~Dgtl~~~~--~~~------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~ 67 (176)
T TIGR00213 2 KAIFLDRDGTINIDH--GYV------------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQL 67 (176)
T ss_pred CEEEEeCCCCEeCCC--CCC------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHH
Confidence 689999999996311 000 01235779999999999999999999999999741
Q ss_pred -HHHHHHHHHcCCCCCCccee--------------e--cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 84 -LHAKQILNLINLNQYFSNKE--------------I--YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~ie--------------~--~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
......+..+++. |+.+- . ..+++|++|..+++++|++|++|+||||+..|+++|+++|+.
T Consensus 68 ~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~ 145 (176)
T TIGR00213 68 TEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVK 145 (176)
T ss_pred HHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCc
Confidence 2334566666654 33321 1 234567999999999999999999999999999999999999
Q ss_pred E-EEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 147 C-IHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 147 t-I~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+ ++|.+|..... .....+|+++.+.
T Consensus 146 ~~i~v~~g~~~~~----~~~~~ad~~i~~~ 171 (176)
T TIGR00213 146 TNVLVRTGKPITP----EAENIADWVLNSL 171 (176)
T ss_pred EEEEEecCCcccc----cccccCCEEeccH
Confidence 8 89999865322 2224588888653
No 35
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.73 E-value=1.3e-17 Score=150.45 Aligned_cols=120 Identities=22% Similarity=0.138 Sum_probs=96.4
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC--------cHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------EILHAKQ 88 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--------~p~~~~~ 88 (538)
|+++||+|||||+.- .+ ........++||+.++|+.|+++|++++++||++ . ...+.
T Consensus 1 k~~~~D~dgtL~~~~--~~------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDV--PY------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS-GRVAR 65 (132)
T ss_pred CEEEEeCCCceecCC--CC------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHH-HHHHH
Confidence 689999999999520 00 0011235789999999999999999999999998 6 77888
Q ss_pred HHHHcCCCCCCcce-eecCCCCHHHHHHHHHHc-CCCCCcEEEEeC-CcccHHHHhhcCCeEEEEC
Q psy8912 89 ILNLINLNQYFSNK-EIYPGQKTTHFESLKKAT-GIEYKDMVFFDD-EERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 89 ~L~~lgL~~~Fd~i-e~~~~~Kp~~f~~ale~l-gi~P~e~L~IGD-s~~DI~aAk~aG~~tI~V~ 151 (538)
.++.+++..+|... ....+++|++|..+++++ +++|++|+|||| +..|+.+|+++|+.+|+++
T Consensus 66 ~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 66 RLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred HHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99999986333322 112355679999999999 599999999999 6999999999999999985
No 36
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.72 E-value=2.9e-17 Score=155.35 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=85.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++|++++++||+ ..++..++.+|+.++|+.+.. ..+++|++|..+++++|++|++
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS---KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 34789999999999999999999999998 347889999999999997622 2345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
|++|||+..|+++|+++|+++|+|
T Consensus 162 ~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999875
No 37
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.72 E-value=4.5e-17 Score=150.21 Aligned_cols=99 Identities=19% Similarity=0.318 Sum_probs=89.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---cC--CCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---YP--GQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~~--~~Kp~~f~~ale~lgi~P~ 125 (538)
.....++||+.++|+.|+++|++++++||++. ..+...++.+|+..+|+.+.. .+ +++|+.|..+++++|++|+
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~ 151 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE 151 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc
Confidence 46788999999999999999999999999987 899999999999999997722 22 3445899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|+||||+..|+++|+++|+.+|+|
T Consensus 152 ~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 152 EILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999986
No 38
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.71 E-value=9.3e-17 Score=164.47 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=102.8
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC---cce--eec--CCCCHHHHHHHHHHcCCCCCc
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---SNK--EIY--PGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F---d~i--e~~--~~~Kp~~f~~ale~lgi~P~e 126 (538)
+.++||+.++|+.|+++|++++|+||++. ..+...++.++...+| +.+ +.. .+++|++|..+++++|++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE-KAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 57999999999999999999999999988 8888888877433344 332 222 234568999999999999999
Q ss_pred EEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhhc
Q psy8912 127 MVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISKL 186 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~~ 186 (538)
|+||||+..|+++|+++||.+|+|.+|...... + ..+|+++.+..+..+.+...+
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~---l--~~ad~vi~~~~~l~~~~~~~~ 276 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADED---F--SGADAVFDCLGDVPLEDFDLL 276 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccccc---c--CCCcEEECChhhcchhhhHHH
Confidence 999999999999999999999999998765432 2 367999888777777665544
No 39
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.71 E-value=7e-17 Score=157.90 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=86.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc-e---eecC--CCCHHHHHHHHHHcCCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-K---EIYP--GQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~-i---e~~~--~~Kp~~f~~ale~lgi~P~ 125 (538)
....++||+.++|+.| +++++|+||++. ..++..++.+|+.++|+. + +..+ +++|++|..+++++|++|+
T Consensus 85 ~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~ 160 (221)
T PRK10563 85 SELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVE 160 (221)
T ss_pred ccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHH
Confidence 4578999999999999 389999999988 889999999999999963 3 1122 3456999999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+|+||||+..|+++|+++|+.++++..+.
T Consensus 161 ~~l~igDs~~di~aA~~aG~~~i~~~~~~ 189 (221)
T PRK10563 161 NCILVDDSSAGAQSGIAAGMEVFYFCADP 189 (221)
T ss_pred HeEEEeCcHhhHHHHHHCCCEEEEECCCC
Confidence 99999999999999999999999997543
No 40
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.71 E-value=4.3e-17 Score=150.69 Aligned_cols=125 Identities=14% Similarity=0.062 Sum_probs=95.9
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------- 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------- 83 (538)
++++||+||||.......+. ......+++||+.++|+.|+++|++++|+||++..
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~ 68 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAP 68 (147)
T ss_pred CeEEEeCCCceeccCCcccC------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHH
Confidence 47999999999542211111 01124579999999999999999999999998630
Q ss_pred -HHHHHHHHHcCCCC--CCcce----e--ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 84 -LHAKQILNLINLNQ--YFSNK----E--IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 84 -~~~~~~L~~lgL~~--~Fd~i----e--~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
..+...++.+|+.. +|... + ...+++|++|..+++++|++|++|+||||+..|+++|+++|+.+|++..|
T Consensus 69 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 69 NGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 34566788888862 22211 1 12356679999999999999999999999999999999999999999765
No 41
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.71 E-value=6.7e-17 Score=175.73 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=98.7
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee----cCCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI----YPGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~----~~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
...++||+.++|+.|+++|++++|+||++. ..++..++.+|+..||+.+.. ..++||++|..++++++ |++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~-~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLT-EYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEE
Confidence 468999999999999999999999999999 999999999999999998722 22478999999998864 78999
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|||+.+|+++|+++|+.+|++.++...... . ..+|+++.+..
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~---~--~~~d~~i~~l~ 447 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFAQEDE---L--AQADIVIDDLL 447 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCCcccc---c--CCCCEEeCCHH
Confidence 9999999999999999999999998654332 1 25788876643
No 42
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.71 E-value=5.1e-17 Score=157.75 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=87.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHH--HHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILH--AKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~--~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~ 125 (538)
...++||+.++|+.|+++|++++|+||++. .. ....+...++.++|+.+.. . .++.|++|..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~-~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFP-TDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCC-ccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 467899999999999999999999999865 33 3333445677789997622 2 34556899999999999999
Q ss_pred cEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 126 DMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
+|+||||+..|+.+|+++|+.+|++.++......+.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999987655444443
No 43
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.70 E-value=1.1e-16 Score=154.65 Aligned_cols=108 Identities=20% Similarity=0.187 Sum_probs=90.2
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCccee---e--cCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKE---I--YPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~ie---~--~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
..++||+.++|+.|+++|++++|+||++. ......+.. .++..+|+.+. . ..+++|++|..+++++|++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCch-hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 45899999999999999999999999987 665555544 36778898762 2 23456799999999999999999
Q ss_pred EEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh
Q psy8912 128 VFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA 162 (538)
Q Consensus 128 L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~ 162 (538)
+||||+..|+++|+++|+.++++.++.+..+.++.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHh
Confidence 99999999999999999999999987766655543
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.70 E-value=1e-16 Score=150.80 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=83.5
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c--CCCCHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y--PGQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~--~~~Kp~~f~~ale~lgi~P~e~L 128 (538)
..++||+.++|+.|+++|++++++||++. .. ...+.++|+.++|+.+.. . ++++|++|..+++++|++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR-DH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch-HH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 68999999999999999999999999988 66 666666999999998622 2 33456899999999999999999
Q ss_pred EEeCCcccHHHHhhcCCeEEEE
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|||+..|+.+|+++|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999875
No 45
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.67 E-value=3.4e-16 Score=150.97 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=82.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecC--CCCHHHHHHHHHHcCCCCCcEE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYP--GQKTTHFESLKKATGIEYKDMV 128 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~--~~Kp~~f~~ale~lgi~P~e~L 128 (538)
..++||+.++|+.|+++|++++|+||++. . .+..++.+|+..+|+.+. ..+ +++|++|..+++++|++|++|+
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDS-R-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCch-h-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 47899999999999999999999999865 4 578899999999999872 222 3456889999999999999999
Q ss_pred EEeCCc-ccHHHHhhcCCeEEE
Q psy8912 129 FFDDEE-RNSHDVSPLGVTCIH 149 (538)
Q Consensus 129 ~IGDs~-~DI~aAk~aG~~tI~ 149 (538)
+|||+. .|+++|+++|+.+|+
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 999997 799999999999874
No 46
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.67 E-value=4.1e-16 Score=150.02 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=81.8
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC----cce--eecCCCCHHHHHHHHHHcCCCCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF----SNK--EIYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F----d~i--e~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
....++||+.++|+.|+++ ++++++||.+. ......++.+++..+| +.+ .....+||++|..+++++| |+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~-~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 71 RYLSAYDDALDVINKLKED-YDFVAVTALGD-SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred HhccCCCCHHHHHHHHHhc-CCEEEEeCCcc-chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence 4567999999999999987 46788898766 5566677778776544 444 1123458999999999999 89
Q ss_pred cEEEEeCCcccHHHHhhc--CCeEEEECCCCC
Q psy8912 126 DMVFFDDEERNSHDVSPL--GVTCIHSWLMMS 155 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk~a--G~~tI~V~~G~~ 155 (538)
+|+||||+..|+++|+++ |+++|++.||..
T Consensus 147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 999999999999999999 999999998853
No 47
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.67 E-value=3.9e-16 Score=148.08 Aligned_cols=118 Identities=16% Similarity=0.090 Sum_probs=101.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC-cHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-EILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-~p~~~~~~L~~l 93 (538)
.+++|++|+||||+. .....++||+.++|+.|+++|++++|+||++ . ..+...++.+
T Consensus 24 ~v~~vv~D~Dgtl~~---------------------~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~-~~~~~~~~~~ 81 (170)
T TIGR01668 24 GIKGVVLDKDNTLVY---------------------PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGE-QRAKAVEKAL 81 (170)
T ss_pred CCCEEEEecCCcccc---------------------CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchH-HHHHHHHHHc
Confidence 479999999999986 2355799999999999999999999999998 5 6677777788
Q ss_pred CCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchH
Q psy8912 94 NLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 94 gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
++..++. ..+++|++|..+++++|++|++|+||||+. .|+.+|+++|+.+|+|.+|....+
T Consensus 82 gl~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 82 GIPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred CCEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 8654332 235677999999999999999999999998 699999999999999999886554
No 48
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.66 E-value=3.9e-16 Score=148.58 Aligned_cols=94 Identities=20% Similarity=0.310 Sum_probs=83.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---c------CCCCHHHHHHHHHHcCCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---Y------PGQKTTHFESLKKATGIE 123 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---~------~~~Kp~~f~~ale~lgi~ 123 (538)
...++||+.++|+.|+ ++++|+||++. ..+...++.+|+..+|+.+.. . ++++|++|..+++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDR-AHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCH-HHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4568999999999998 47999999988 899999999999999997721 1 255678999999999999
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
|++|+||||+..|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
No 49
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.66 E-value=6.6e-16 Score=153.70 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=82.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+.|+++ ++++++||++. . ++.+|+..+|+.+.. ..+++|++|..+++++|++|++
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 182 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGE 182 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhH
Confidence 3477899999999999976 99999999876 3 478899999998722 2245678999999999999999
Q ss_pred EEEEeCCc-ccHHHHhhcCCeEEEECCCC
Q psy8912 127 MVFFDDEE-RNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 127 ~L~IGDs~-~DI~aAk~aG~~tI~V~~G~ 154 (538)
|+||||+. .|+.+|+++|++++++..+.
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~~ 211 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPEN 211 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence 99999994 99999999999999998654
No 50
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.65 E-value=1.3e-15 Score=148.72 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=89.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---eecC--CCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EIYP--GQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~~~--~~Kp~~f~~ale~lgi~P~e~ 127 (538)
..+++|++.++|+.|+++ ++++++||+.. ..+...+..+|+.++||.+ +..+ ++.|++|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~-~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGAR-PHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCCh-HHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 99999999878 8999999999999999987 2333 344589999999999999999
Q ss_pred EEEeCCcc-cHHHHhhcCCeEEEECCCCC
Q psy8912 128 VFFDDEER-NSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 128 L~IGDs~~-DI~aAk~aG~~tI~V~~G~~ 155 (538)
+||||+.. ||.+|+++||++|++..+..
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~ 203 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGK 203 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCC
Confidence 99999975 66999999999999987654
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.65 E-value=7.8e-16 Score=150.15 Aligned_cols=96 Identities=21% Similarity=0.271 Sum_probs=84.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------ee-----cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------EI-----YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e~-----~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++..++.+|+..+|+.. .. .+.+||.+|..
T Consensus 81 ~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 159 (219)
T TIGR00338 81 RENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLI 159 (219)
T ss_pred HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHH
Confidence 44567999999999999999999999999988 8999999999998888531 01 12348899999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
++++++++|++|+||||+.+|+.+|+++|+..
T Consensus 160 ~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 160 LLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 99999999999999999999999999999974
No 52
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.64 E-value=1.5e-15 Score=150.03 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=86.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCcce---eecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P 124 (538)
.....+|||+.++|+.|+++|++++|+||++. ..+...++.. ++..+|+.. ....+++|++|..+++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~-~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSV-PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 44567999999999999999999999999988 7777777765 455555543 2334566799999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
++|+||||+..|+++|+++||.++++.++.
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999997644
No 53
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.64 E-value=6.1e-16 Score=145.78 Aligned_cols=124 Identities=19% Similarity=0.131 Sum_probs=98.7
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC---------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------- 81 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--------------- 81 (538)
|+++||.||||+...-..+ .........++||+.++|+.|+++|++++|+||.+
T Consensus 2 ~~~~~d~dg~l~~~~~~~~-----------~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~ 70 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDF-----------QVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGP 70 (161)
T ss_pred CEEEEeCCCCccccCCCcc-----------ccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHH
Confidence 6899999999976221000 01113357899999999999999999999999973
Q ss_pred cHHHHHHHHHHcCCCCCCcceee----------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 82 EILHAKQILNLINLNQYFSNKEI----------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 82 ~p~~~~~~L~~lgL~~~Fd~ie~----------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
. ..+...++.+|+. |+.+-. ..+++|++|..++++++++|++|+||||+..|+.+|+++|+.++++.
T Consensus 71 ~-~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 71 H-NLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred H-HHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 3 5678889999986 653311 12345689999999999999999999999999999999999999998
Q ss_pred CCC
Q psy8912 152 LMM 154 (538)
Q Consensus 152 ~G~ 154 (538)
++.
T Consensus 148 ~~~ 150 (161)
T TIGR01261 148 EEE 150 (161)
T ss_pred hhh
Confidence 764
No 54
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.64 E-value=1e-15 Score=153.39 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=92.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++.+. .++..|+++||.+||+.+.... .++++.|+++++++|++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~-~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRE-NAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 45789999999999999999999999999754 8899999999999999533322 24567799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
|+||||+..|+++|+++|+.+|+|.||.....
T Consensus 184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~ 215 (248)
T PLN02770 184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPESL 215 (248)
T ss_pred EEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHH
Confidence 99999999999999999999999999865443
No 55
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.62 E-value=1.1e-15 Score=138.48 Aligned_cols=115 Identities=28% Similarity=0.389 Sum_probs=91.1
Q ss_pred ceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC-
Q psy8912 17 KMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN- 94 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg- 94 (538)
|+++||+|||||+.+..... .+ .... . .++||+.++|+.|+++|++++++||++.+..+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~-------~~~~---~-~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDP-------IIDL---E-VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCc-------chhh---H-HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 68999999999985432111 00 0000 0 6899999999999999999999999943388888899888
Q ss_pred ------CCCCCcceeec-CCCCHHHHHHHHHHcC--CCCCcEEEEeCCcccHHHHhh
Q psy8912 95 ------LNQYFSNKEIY-PGQKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 95 ------L~~~Fd~ie~~-~~~Kp~~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~ 142 (538)
+.++|+.+... ..++|++|..+++++| ++|++|+||||+..|+.+.++
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 78899986333 3467899999999999 999999999999999887654
No 56
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.62 E-value=1.3e-15 Score=150.38 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=92.5
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIE 491 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~ 491 (538)
.....+.++|||.++|++|+++|+++|++|++.+. .++..|+.+|+.+||+...... .+.|+.|+.++++||++
T Consensus 80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~-~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRR-AAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHH-HHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 44556889999999999999999999999999754 8899999999999999422211 24577799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++||+||||.+||+||++|||.||+|+.+.+
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999998554
No 57
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.60 E-value=3.9e-15 Score=140.95 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=90.7
Q ss_pred CceEEEeCCCCCChhhHh-hhhchhHHHHHHHHhhhcCCCc-cCCCHHHHHHHhhhCCceEEEEcCCCcH----------
Q psy8912 16 PKMVVFDLDYTLWPLHVH-DLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI---------- 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~-~~i~~~~~~~~~i~~~~~~~~~-l~pgv~elL~~Lk~~GikiaIvTn~~~p---------- 83 (538)
.|+++||+|||||...-. .+. .....++ +|||+.++|+.|+++|++++|+||++..
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~ 80 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFP------------TSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESF 80 (166)
T ss_pred CcEEEEeCCCceEecCCCCccc------------CChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHH
Confidence 589999999999762100 000 0012233 6899999999999999999999998651
Q ss_pred -HHHHHHHHHcCCCCCCcce--e--ecCCCCHHHHHHHHHHcC--CCCCcEEEEeCCc--------ccHHHHhhcCCeEE
Q psy8912 84 -LHAKQILNLINLNQYFSNK--E--IYPGQKTTHFESLKKATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTCI 148 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~Fd~i--e--~~~~~Kp~~f~~ale~lg--i~P~e~L~IGDs~--------~DI~aAk~aG~~tI 148 (538)
..++.+++.+|+.. +..+ . ...+++|++|..+++++| ++|++|+||||+. .|+++|+++|+.++
T Consensus 81 ~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~ 159 (166)
T TIGR01664 81 KNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFK 159 (166)
T ss_pred HHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence 14677899999853 2221 1 122345689999999999 9999999999996 69999999999975
Q ss_pred E
Q psy8912 149 H 149 (538)
Q Consensus 149 ~ 149 (538)
+
T Consensus 160 ~ 160 (166)
T TIGR01664 160 Y 160 (166)
T ss_pred C
Confidence 4
No 58
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.60 E-value=2.9e-15 Score=149.90 Aligned_cols=104 Identities=9% Similarity=-0.034 Sum_probs=90.1
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccceee-----cCCchHHHHHHHHHhCCC-
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEIF-----PGQKTTHFANLKKATGIE- 491 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i~-----~~~k~~~~~kal~~lgi~- 491 (538)
...+.++||+.++|++|+++|++++|+|++.. +.++.+|+++|+.+|| +.+... ..++++.|+++++++|+.
T Consensus 95 ~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 95 AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred HhcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999875 4888999999999996 632221 114577799999999995
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|++|+||||+.+|+++|++||+.+|+|.||..
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 99999999999999999999999999999874
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.60 E-value=6.6e-15 Score=140.87 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=85.0
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee---------------cCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~---------------~~~~Kp~~f~~ 115 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++.+++.+|+..+|+.... .+.+|++.+..
T Consensus 76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIM-CLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 34567899999999999999999999999988 999999999998877764311 11234467889
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+++++|++|++|+||||+.+|+.+|+.+|+.++..+.+
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 99999999999999999999999999999976654433
No 60
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.59 E-value=5.3e-15 Score=143.18 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=91.8
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
+.....++||+.++|++|+++|++++|+|++.. ..++..|+++|+.+||+...... .++++.|.++++++|++|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 158 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP 158 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh
Confidence 444578999999999999999999999999875 48889999999999999432221 134677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|+||||+.+|+++|+++|+.+++|.||..
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~ 189 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYR 189 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence 9999999999999999999999999999865
No 61
>PLN02954 phosphoserine phosphatase
Probab=99.59 E-value=2.5e-14 Score=140.05 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=89.1
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC--CCCcce-e----------------ecCCCCHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNK-E----------------IYPGQKTTHF 113 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~--~~Fd~i-e----------------~~~~~Kp~~f 113 (538)
...++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+. .+|... . ..+.+||+.+
T Consensus 82 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i 160 (224)
T PLN02954 82 PPRLSPGIPELVKKLRARGTDVYLVSGGFR-QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAV 160 (224)
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHH
Confidence 356899999999999999999999999998 9999999999996 356421 0 0123588999
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+.+++++|. ++|+||||+.+|+.+|+++|+.++...++....... ...+++++.+.
T Consensus 161 ~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~ 216 (224)
T PLN02954 161 QHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAV----AAKADWFVTDF 216 (224)
T ss_pred HHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHH----HhcCCEEECCH
Confidence 999998885 699999999999999999888866544333222221 23578887653
No 62
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.59 E-value=7.9e-15 Score=135.16 Aligned_cols=91 Identities=20% Similarity=0.236 Sum_probs=79.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----ecCCCCHHHHHHHHHHcCCCCCc
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----IYPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----~~~~~Kp~~f~~ale~lgi~P~e 126 (538)
......+||+.++|+.|+++|++++|+||++. ..+...++.+ +..+|+.+. ...+++|++|..+++++|++| +
T Consensus 60 ~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~ 136 (154)
T TIGR01549 60 DAEEAYIRGAADLLKRLKEAGIKLGIISNGSL-RAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-E 136 (154)
T ss_pred chhheeccCHHHHHHHHHHCcCeEEEEeCCch-HHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-C
Confidence 34556789999999999999999999999988 8888888887 778888762 223456799999999999999 9
Q ss_pred EEEEeCCcccHHHHhhcC
Q psy8912 127 MVFFDDEERNSHDVSPLG 144 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~aG 144 (538)
|+||||+..|+++|+++|
T Consensus 137 ~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 137 VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEEeCCHHHHHHHHHcc
Confidence 999999999999999987
No 63
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.59 E-value=4.1e-15 Score=146.98 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=90.9
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~p 492 (538)
+...+.++||+.++|++|+++|++++|+||+... .++..|+++|+.+||+.+.+. .. ++++.|+++++++|++|
T Consensus 88 ~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~-~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p 166 (224)
T PRK14988 88 QGPRAVLREDTVPFLEALKASGKRRILLTNAHPH-NLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA 166 (224)
T ss_pred HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHH-HHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence 4456889999999999999999999999998754 778889999999999943321 12 34677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCE-EEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVT-CIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~-~i~V~dg~t~ 524 (538)
++|+||||+..|+++|+++|+. +++|+++.+.
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 9999999999999999999997 6889987653
No 64
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.58 E-value=5.8e-15 Score=145.34 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=90.1
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~l 496 (538)
..+|||+.++|.+|+++|++++|+|++++. .++.+|+++|+.+||+...... . +++.++..+++++|++|++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~-~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPER-ELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHH-HHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 589999999999999999999999999865 8899999999999999543312 2 346668999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
||||+.+|+++|++||+.+++|.||.+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 999999999999999999999999985
No 65
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.58 E-value=1.4e-14 Score=144.68 Aligned_cols=133 Identities=11% Similarity=0.043 Sum_probs=97.5
Q ss_pred eEEEeCCCCCChhhHh-hhh-chhHH----------HHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCC----C
Q psy8912 18 MVVFDLDYTLWPLHVH-DLV-APFKK----------IGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT----S 81 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~-~~i-~~~~~----------~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~----~ 81 (538)
+|+||+||||.++.-. .+. +.+.. .+..+.........+++++.++|+.|+++|++++++||+ .
T Consensus 65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~ 144 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT 144 (237)
T ss_pred EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence 9999999999654421 111 11111 112222223455677888999999999999999999998 4
Q ss_pred cHHHHHHHHHHcCCCCCCcce---eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 82 EILHAKQILNLINLNQYFSNK---EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 82 ~p~~~~~~L~~lgL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
. ..++.+++.+|+.++|+.+ +....+||+.. .+++++++ ++||||+.+|+.+|+++|+.++.|.||...
T Consensus 145 ~-~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 145 D-TVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred H-HHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 5 6788889999999999875 11222456554 45677776 899999999999999999999999988754
No 66
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.57 E-value=1.1e-14 Score=140.20 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=77.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----ecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----IYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
.+.+++.++|+.|+++|++++|+||++. ..++..++.+|+..+|+.+. ...+++|+.|..+++++|++|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPR-KDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 3445669999999999999999999988 99999999999999999762 123556789999999999999999999
Q ss_pred eCCcccHHHHhhc
Q psy8912 131 DDEERNSHDVSPL 143 (538)
Q Consensus 131 GDs~~DI~aAk~a 143 (538)
||+.+|+.+|+++
T Consensus 185 GD~~~Di~aA~~a 197 (197)
T TIGR01548 185 GDTVDDIITGRKA 197 (197)
T ss_pred eCCHHHHHHHHhC
Confidence 9999999999875
No 67
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.57 E-value=9.1e-15 Score=141.51 Aligned_cols=104 Identities=17% Similarity=0.211 Sum_probs=91.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .++..|+++|+.+||+..... ..++++.|+++++++|++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGP-RARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 35789999999999999999999999998754 788899999999999943221 124577799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+++|.||...
T Consensus 151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~ 180 (205)
T TIGR01454 151 AVMVGDAVTDLASARAAGTATVAALWGEGD 180 (205)
T ss_pred eEEEcCCHHHHHHHHHcCCeEEEEEecCCC
Confidence 999999999999999999999999999743
No 68
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.57 E-value=7.5e-15 Score=145.21 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=91.3
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~p 492 (538)
+.....++||+.++|++|+++|++++|+|+++. ..++..|+++|+.+||+...... .++++.|.++++++|++|
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p 168 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP 168 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh
Confidence 334578999999999999999999999999875 47788999999999999432211 245677999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++|++|||+.+|+++|+++|+.+|+|.||..
T Consensus 169 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 199 (229)
T PRK13226 169 TDCVYVGDDERDILAARAAGMPSVAALWGYR 199 (229)
T ss_pred hhEEEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence 9999999999999999999999999999874
No 69
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.57 E-value=9.5e-15 Score=142.31 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=91.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .+...|+.+|+.+||+.+.... .++++.|.++++++|++|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRD-TVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 45779999999999999999999999998754 7888999999999999533221 24577799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+++|.||...
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~ 187 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKG 187 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEcCCCCC
Confidence 999999999999999999999999998643
No 70
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.56 E-value=1.3e-14 Score=153.56 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=92.3
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++|+|+++. ..++.+|+++||.+||+.+.... .++++.|+.+++++|++|+
T Consensus 212 ~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pe 290 (381)
T PLN02575 212 GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPE 290 (381)
T ss_pred ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcc
Confidence 34578999999999999999999999999975 48899999999999999533222 1356779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+|+||||+..||++|+++|+++|+|.++....
T Consensus 291 ecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~ 322 (381)
T PLN02575 291 RCIVFGNSNQTVEAAHDARMKCVAVASKHPIY 322 (381)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECCCCChh
Confidence 99999999999999999999999999875444
No 71
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.56 E-value=1.3e-14 Score=142.20 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=92.5
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~p 492 (538)
......++||+.++|++|+++|++++|+|++... .++..++.++|.+||+..... ..++++.|+.+++++|++|
T Consensus 87 ~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~-~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 165 (222)
T PRK10826 87 IEETRPLLPGVREALALCKAQGLKIGLASASPLH-MLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP 165 (222)
T ss_pred HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHH-HHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH
Confidence 3445789999999999999999999999998754 788899999999999953332 1255778999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|++|||+.+|+++|+++|+.+|+|+++...
T Consensus 166 ~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~ 197 (222)
T PRK10826 166 LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ 197 (222)
T ss_pred HHeEEEcCChhhHHHHHHcCCEEEEecCCccC
Confidence 99999999999999999999999999987544
No 72
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.56 E-value=1.4e-14 Score=146.59 Aligned_cols=100 Identities=11% Similarity=0.152 Sum_probs=88.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++|+|++... .++.+|+++||.+||+.+.... .++++.|+++++++|++|++
T Consensus 106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~-~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~ 184 (260)
T PLN03243 106 GLYRLRPGSREFVQALKKHEIPIAVASTRPRR-YLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPER 184 (260)
T ss_pred cCcccCCCHHHHHHHHHHCCCEEEEEeCcCHH-HHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHH
Confidence 35789999999999999999999999998754 8899999999999999533222 23466799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|+||||+..|+++|+++|+.+|+|.+
T Consensus 185 ~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 185 CIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999999999974
No 73
>PRK06769 hypothetical protein; Validated
Probab=99.55 E-value=1e-14 Score=138.77 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=86.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCch-------HHHHHHHhhcCCcccccccee------ecCCchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEM-------LRAHQLVDLFNWNQHFDHKEI------FPGQKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~-------~~a~~~L~~lgL~~yFd~~~i------~~~~k~~~~~kal~~ 487 (538)
.+.++|||.++|++|+++|++++|+|+++.. ......++.+|+.+||.+... ...++++.|++++++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 4679999999999999999999999987531 023445888999888864321 123567789999999
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++++|++|+||||+..|+++|+++|+.+|+|.||...
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 9999999999999999999999999999999998643
No 74
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.55 E-value=1.8e-14 Score=146.88 Aligned_cols=107 Identities=13% Similarity=0.210 Sum_probs=93.9
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcE
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~ 495 (538)
+...+.++||+.++|++|+++|++++|+|++..+ .+...|+++||.+||+.+..... .|++.|.+++++++++|++|
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~-~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~ 215 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQ-NIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAV 215 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHE
Confidence 3456789999999999999999999999999754 88999999999999995322222 46788999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+||||+..|+++|++||+.+|+|+||....
T Consensus 216 l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~ 245 (273)
T PRK13225 216 MYVGDETRDVEAARQVGLIAVAVTWGFNDR 245 (273)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCCH
Confidence 999999999999999999999999997654
No 75
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.55 E-value=1.5e-14 Score=133.67 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=83.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHhhcCCcc---ccccc---e-e-ecCCch
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--------------MLRAHQLVDLFNWNQ---HFDHK---E-I-FPGQKT 478 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--------------~~~a~~~L~~lgL~~---yFd~~---~-i-~~~~k~ 478 (538)
...++||+.++|++|+++|++++|+|++++ ...+...|+++|+.. ||... . . ...+++
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCH
Confidence 356999999999999999999999998863 135677899999872 33211 1 1 123678
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+.|+.+++++|++|++|+||||+..|+++|+++|+++|.|++|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 8899999999999999999999999999999999999999886
No 76
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.55 E-value=2e-14 Score=140.09 Aligned_cols=103 Identities=15% Similarity=0.243 Sum_probs=89.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|++|+++|++++|+|+++.. .+...|+++||.+||+.+.... .++++.|+++++++|++|++|
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPV-KQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 4689999999999999999999999998754 6788899999999999533221 135677999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+|||+. +|+++|+++|+.+|+|.++...
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTVWINQGKSS 200 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCc
Confidence 9999998 8999999999999999998653
No 77
>KOG3085|consensus
Probab=99.54 E-value=2.2e-14 Score=142.25 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=87.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-----eecCCCCHHHHHHHHHHcCCCCCcE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-----EIYPGQKTTHFESLKKATGIEYKDM 127 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-----e~~~~~Kp~~f~~ale~lgi~P~e~ 127 (538)
.....+++.++++.||++|+.++++||... ..+..+..+|+..|||.+ +...++.|.+|..+++++|++|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~--r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDD--RLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcH--HHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 456778899999999999999999999954 455889999999999987 3344566799999999999999999
Q ss_pred EEEeCCc-ccHHHHhhcCCeEEEECCCCC
Q psy8912 128 VFFDDEE-RNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 128 L~IGDs~-~DI~aAk~aG~~tI~V~~G~~ 155 (538)
++|||+. +|+++|+++||++++|.+..+
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEEccccc
Confidence 9999996 579999999999999986544
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.54 E-value=3.4e-14 Score=124.94 Aligned_cols=118 Identities=22% Similarity=0.252 Sum_probs=97.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ 97 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~ 97 (538)
+++||+|||||+...... ......++|++.++|+.|+++|++++++||+.. ..+...++.+++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA--------------EIEELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCcccc--------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCch
Confidence 489999999987321110 023568999999999999999999999999988 99999999999876
Q ss_pred CCcceee---c--C----------------CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 98 YFSNKEI---Y--P----------------GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 98 ~Fd~ie~---~--~----------------~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
+|+.+.. . . ++++..+..++++++.+++++++|||+.+|+.+|+++|+.+++|
T Consensus 66 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 66 YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 6665411 1 1 55678899999999999999999999999999999999998874
No 79
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.54 E-value=9.4e-15 Score=135.46 Aligned_cols=128 Identities=15% Similarity=0.065 Sum_probs=93.0
Q ss_pred cceEEeecC----CCCcCCCCCCccc--ccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 384 KDMVFFDDE----ERNARSISKLGVI--GIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 384 ~~l~~~Dld----h~~~s~~~p~~~i--~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
+-++|+||| |....+.+|+... ++.+... .......+.++||+.++|++|+ ++++++|+|++..+ .++.+
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~-~~~~i 77 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLID--GHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRM-YADPV 77 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeC--CceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHH-HHHHH
Confidence 568999999 4433222232211 0111111 1123445789999999999999 67999999999865 89999
Q ss_pred HhhcCCccc-cccceee---cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 458 VDLFNWNQH-FDHKEIF---PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 458 L~~lgL~~y-Fd~~~i~---~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
|+++++..+ |+.+... ...|+. |+++++++|.+|++||+|||+..++++|+++|+.+-
T Consensus 78 l~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 78 LDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred HHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 999999764 5732221 124565 999999999999999999999999999999998874
No 80
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.53 E-value=2.9e-14 Score=144.11 Aligned_cols=106 Identities=12% Similarity=-0.030 Sum_probs=89.9
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc-ccceeec---C--CchHHHHHHHHHhCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF-DHKEIFP---G--QKTTHFANLKKATGI 490 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF-d~~~i~~---~--~k~~~~~kal~~lgi 490 (538)
.+...+.++||+.++|++|+++|++++|+|++.+. .+..+|+.+++.+|| +.+.... . ++++.|+++++++|+
T Consensus 95 ~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~-~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~ 173 (267)
T PRK13478 95 KLADYATPIPGVLEVIAALRARGIKIGSTTGYTRE-MMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGV 173 (267)
T ss_pred HHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHH-HHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCC
Confidence 34456789999999999999999999999998754 778899999999986 6322111 1 356779999999999
Q ss_pred C-CCcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 491 E-YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 491 ~-pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
. |++|+||||+.+|+++|+++|+.+|+|.+|..
T Consensus 174 ~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 174 YDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 6 69999999999999999999999999999875
No 81
>PRK11587 putative phosphatase; Provisional
Probab=99.53 E-value=3.8e-14 Score=138.82 Aligned_cols=104 Identities=12% Similarity=-0.020 Sum_probs=87.5
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pe 493 (538)
...+.++||+.++|++|+++|++++|+|++... .+...++.+++ .+|+..... ..++++.|..+++++|++|+
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~-~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSVP-VASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCch-HHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 346789999999999999999999999998765 66778899998 456632211 12456779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|+||||+..|+++|+++|+.+|+|.++...
T Consensus 157 ~~l~igDs~~di~aA~~aG~~~i~v~~~~~~ 187 (218)
T PRK11587 157 ECVVVEDAPAGVLSGLAAGCHVIAVNAPADT 187 (218)
T ss_pred cEEEEecchhhhHHHHHCCCEEEEECCCCch
Confidence 9999999999999999999999999987643
No 82
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.53 E-value=4.7e-14 Score=134.50 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHhhcCCcccccccee----------ecCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTE--------------MLRAHQLVDLFNWNQHFDHKEI----------FPGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~--------------~~~a~~~L~~lgL~~yFd~~~i----------~~~~ 476 (538)
.+.++||+.++|++|+++|++++|+|+++. .++....|+++|+ +|+.... ...+
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 467999999999999999999999998752 1244566788887 3552111 1124
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHH
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+++.|.++++++|++|++|++|||+.+|+++|+++|+.+|++.+|....
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~ 153 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVT 153 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCch
Confidence 5677999999999999999999999999999999999999999987643
No 83
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.53 E-value=6.8e-14 Score=131.88 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=89.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------------chHHHHHHHhhcCCccccccceee----------cCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------------EMLRAHQLVDLFNWNQHFDHKEIF----------PGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------------~~~~a~~~L~~lgL~~yFd~~~i~----------~~~ 476 (538)
.+.++|||.++|++|+++|++++|+|+++ ....+..+|+.+|+. |+...++ ..+
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 36799999999999999999999999863 123678889999997 6522211 124
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC-CCHHHHHH
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG-MSHSVLHK 529 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg-~t~~~~~~ 529 (538)
+++.|..++++++++|++|+||||+.+|+++|+++|+++++|.++ ++|+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~~~~~~~~ 158 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEELNWDMIAE 158 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhcCHHHHHH
Confidence 567799999999999999999999999999999999999999986 77776554
No 84
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.52 E-value=5.1e-14 Score=133.89 Aligned_cols=122 Identities=12% Similarity=0.102 Sum_probs=92.4
Q ss_pred ceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch------------
Q psy8912 385 DMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------------ 451 (538)
Q Consensus 385 ~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~------------ 451 (538)
.+++||.| -.+.. .+|. .....+.++||+.++|++|+++|++++|+||++..
T Consensus 2 ~~~~~D~Dgtl~~~--~~~~-------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINID--HGYV-------------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCC--CCCC-------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 36889999 44431 1332 12234779999999999999999999999998741
Q ss_pred --HHHHHHHhhcCCcccccccee----------------ecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 452 --LRAHQLVDLFNWNQHFDHKEI----------------FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 452 --~~a~~~L~~lgL~~yFd~~~i----------------~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
......|+.+++. |+.... ...++++.|+.+++++|++|++|+||||+.+|+++|+++|+
T Consensus 67 ~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~ 144 (176)
T TIGR00213 67 LTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV 144 (176)
T ss_pred HHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence 2344567777665 331110 11246778999999999999999999999999999999999
Q ss_pred EE-EEECCCCC
Q psy8912 514 TC-IHVKDGMS 523 (538)
Q Consensus 514 ~~-i~V~dg~t 523 (538)
.+ ++|.||..
T Consensus 145 ~~~i~v~~g~~ 155 (176)
T TIGR00213 145 KTNVLVRTGKP 155 (176)
T ss_pred cEEEEEecCCc
Confidence 98 89999865
No 85
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.52 E-value=2.8e-14 Score=129.31 Aligned_cols=88 Identities=24% Similarity=0.302 Sum_probs=78.0
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC-------Cccccccceee-cCCchHHHHHHHHHhC--CCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN-------WNQHFDHKEIF-PGQKTTHFANLKKATG--IEY 492 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg-------L~~yFd~~~i~-~~~k~~~~~kal~~lg--i~p 492 (538)
.+|||+.++|++|+++|+++++||+++.++.+..+++.++ +.+||+..... ..+++++|.++++++| ++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 6999999999999999999999999945668888999999 89999954443 3367888999999999 999
Q ss_pred CcEEEEecccccHHhHcc
Q psy8912 493 KDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~ 510 (538)
++|+||||+..+++++++
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 999999999999998875
No 86
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.52 E-value=5e-14 Score=135.45 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=90.2
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHh
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKAT 488 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~l 488 (538)
+.+.+ ..+.++||+.++|++|+++|++++|+|+++.. .++..|+++||.+||+.+.... .++++.|..+++++
T Consensus 84 ~~~~~-~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~-~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~ 161 (198)
T TIGR01428 84 LAEAY-LRLPPHPDVPAGLRALKERGYRLAILSNGSPA-MLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEAL 161 (198)
T ss_pred HHHHH-hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHh
Confidence 34444 35789999999999999999999999998754 7888999999999999433221 13466799999999
Q ss_pred CCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 489 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 489 gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|++|++|++|||+.+|+++|+++|+.+|.|..+
T Consensus 162 ~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 162 GVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred CCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 999999999999999999999999999999764
No 87
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.51 E-value=5.2e-14 Score=137.37 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=89.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc--cccccceeecC-----CchHHHHHHHHHhCCC-C
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKEIFPG-----QKTTHFANLKKATGIE-Y 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~--~yFd~~~i~~~-----~k~~~~~kal~~lgi~-p 492 (538)
...++||+.++|++|+++|++++|+|++..+ .++..|+++|+. +||+....... ++++.|.++++++|+. |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~-~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRD-TAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 4689999999999999999999999999755 788899999999 99994322211 3567799999999998 7
Q ss_pred CcEEEEecccccHHhHcccCCEE-EEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTC-IHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~-i~V~dg~t~ 524 (538)
++|+||||+..|+++|+++|+.+ +++.+|...
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~ 196 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHD 196 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCc
Confidence 99999999999999999999999 999998643
No 88
>PLN02811 hydrolase
Probab=99.51 E-value=4.7e-14 Score=138.47 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=86.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-------CCchHHHHHHHHHhC---
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-------GQKTTHFANLKKATG--- 489 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-------~~k~~~~~kal~~lg--- 489 (538)
....++|||.++|+.|+++|++++|+|++.........++..++.+||+...... .++++.|++++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 4578999999999999999999999999875434334555668889998433333 135667999999996
Q ss_pred CCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 490 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 490 i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|++|+||||+..|+++|+++|+.+|+|.++...
T Consensus 155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~ 189 (220)
T PLN02811 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLD 189 (220)
T ss_pred CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCc
Confidence 99999999999999999999999999999987643
No 89
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.51 E-value=2.7e-14 Score=148.45 Aligned_cols=120 Identities=24% Similarity=0.286 Sum_probs=101.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH--
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-- 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-- 92 (538)
.+|+|+||+|+|||..-+.... ........+|||+.++|+.|+++|++++|+||++. ..+..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g-----------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDG-----------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCC-----------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCc
Confidence 3799999999999972211110 00011234689999999999999999999999988 999999999
Q ss_pred --cCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 93 --INLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 93 --lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
+++.++|+.+....++||+.+..+++++|+.|++++||||++.|+.++++++..
T Consensus 70 ~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 70 DFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 899999999877788899999999999999999999999999999999997765
No 90
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.51 E-value=7.1e-14 Score=143.14 Aligned_cols=128 Identities=18% Similarity=0.179 Sum_probs=103.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.++++||+||||....-.. ++ .+. ......++|++.++|+.|+++|++++++||++. ...+..++.+++
T Consensus 158 ~~~~~~D~dgtl~~~~~~~---~~--~~~-----~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~-~~~~~~l~~l~~ 226 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRS---PY--DWT-----KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDG-VCEEDTVEWLRQ 226 (300)
T ss_pred CCEEEEECCCcCcCCCCCC---cc--chh-----hcccCCCChhHHHHHHHHHhCCCEEEEEeCCCh-hhHHHHHHHHHH
Confidence 5799999999996521100 00 000 123457899999999999999999999999998 999999999999
Q ss_pred CC-CCcceeecC------------CCCHHHHHHHHHHcCC-CCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 96 NQ-YFSNKEIYP------------GQKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 96 ~~-~Fd~ie~~~------------~~Kp~~f~~ale~lgi-~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.+ +|+.+.... +++|+++..++++++. +|++|++|||+..|+++|+++|+.+++|.||.
T Consensus 227 ~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 227 TDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred cCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 86 888663222 3456889999999998 67999999999999999999999999998874
No 91
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.51 E-value=4.8e-14 Score=136.22 Aligned_cols=108 Identities=22% Similarity=0.275 Sum_probs=89.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh-cCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL-FNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~-lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
..++||+.++|++|+++|++++|+|+++.. .....+.. .++..||+...... .++++.|+.+++++|++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~-~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRL-HTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchh-hHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 358999999999999999999999998754 54545554 48889999432221 145777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCHHHHHHH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKG 530 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~ 530 (538)
+||||+..|+++|+++|++++.++++.++....+.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHh
Confidence 99999999999999999999999998887766554
No 92
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.50 E-value=5.8e-14 Score=132.79 Aligned_cols=96 Identities=17% Similarity=0.195 Sum_probs=83.2
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee~ 495 (538)
...++|||.++|++|+++|++++|+|++.. +...|+++||.+||+..... ..++++.|.+++++++++|++|
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC 161 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 357899999999999999999999997642 45689999999999943221 1256777999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEEC
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
|+|||+.+|+++|+++|+.+|+|+
T Consensus 162 v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 162 IGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999984
No 93
>KOG2914|consensus
Probab=99.49 E-value=1.3e-13 Score=135.96 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=88.9
Q ss_pred hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC-CCCCCcceee-------cCCCCHHHHHHHHHHcC
Q psy8912 50 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN-LNQYFSNKEI-------YPGQKTTHFESLKKATG 121 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg-L~~~Fd~ie~-------~~~~Kp~~f~~ale~lg 121 (538)
......+.||+.++++.|+..|++++++|++++ ...+..+..++ +...|+.+.. .+++.|++|..+++++|
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~-~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTS-ASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred hccccccCCcHHHHHHHHHhCCCCeeEEecCCc-ccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 566778999999999999999999999999988 88888888887 5566665422 23456799999999999
Q ss_pred CCC-CcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 122 IEY-KDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 122 i~P-~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
..| +.||+++|++.++++|+++||++|++.+
T Consensus 166 ~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 999 9999999999999999999999999987
No 94
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.49 E-value=1.4e-13 Score=140.33 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhh-----CCCCCCEEEeCCc
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEAT-----GIDYKDMIYFDDE 176 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l-----~~~~~d~Ii~d~~ 176 (538)
.|.+|..+++++|++|++|+||||+. .||++|+++|+.+++|.||....+.++.. ....||+++.+..
T Consensus 204 ~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~ 277 (279)
T TIGR01452 204 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLA 277 (279)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccc
Confidence 34679999999999999999999995 89999999999999999999877666532 2357899887643
No 95
>PRK10444 UMP phosphatase; Provisional
Probab=99.49 E-value=3.1e-13 Score=135.88 Aligned_cols=69 Identities=10% Similarity=-0.069 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|..++++++++|++|+||||+. .|+.+|+++|+.+++|.+|....+..+. ....||+++.+..+
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~-~~~~pd~~~~sl~e 244 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS-MPFRPSWIYPSVAD 244 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc-CCCCCCEEECCHHH
Confidence 345789999999999999999999997 7999999999999999999988766554 34678999877544
No 96
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.49 E-value=4.9e-14 Score=131.58 Aligned_cols=135 Identities=10% Similarity=0.093 Sum_probs=101.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+||||.+....... . ++......+-++. +|++|+++|++++|+||++. ..+...++.+|+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~--~--------~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~-~~~~~~l~~~gi 67 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTN--N--------GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKA-KLVEDRCKTLGI 67 (154)
T ss_pred CeEEEEeCceeEEcCeEEECC--C--------CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCC-HHHHHHHHHcCC
Confidence 589999999999763210000 0 0000111122332 89999999999999999998 889999999999
Q ss_pred CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 96 NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 96 ~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
..+|+. .++||+.+..+++++|++|++|+||||+.+|+.+++++|+. +++.+... .. ...++++....
T Consensus 68 ~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~---~~----~~~a~~i~~~~ 135 (154)
T TIGR01670 68 THLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP---LL----IPRADYVTRIA 135 (154)
T ss_pred CEEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH---HH----HHhCCEEecCC
Confidence 988875 36789999999999999999999999999999999999996 77766542 11 22368887664
No 97
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.49 E-value=1.6e-13 Score=138.44 Aligned_cols=68 Identities=18% Similarity=0.061 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++|.+|..+++++|++|++|+||||+. .|+.+|+++|+.+++|.+|.......+ .....||+++.+..
T Consensus 180 P~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~-~~~~~pd~~~~sl~ 248 (257)
T TIGR01458 180 PSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEE-KINVPPDLTCDSLP 248 (257)
T ss_pred CCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhc-ccCCCCCEEECCHH
Confidence 345789999999999999999999996 899999999999999999875433222 23457888887643
No 98
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.48 E-value=1.3e-13 Score=128.44 Aligned_cols=110 Identities=22% Similarity=0.169 Sum_probs=94.6
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
-+++|++|+|+||.+ -.....-|.+.+.+.+++++|+++.|+||++. ..+....+.+|
T Consensus 27 Gikgvi~DlDNTLv~---------------------wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e-~RV~~~~~~l~ 84 (175)
T COG2179 27 GIKGVILDLDNTLVP---------------------WDNPDATPELRAWLAELKEAGIKVVVVSNNKE-SRVARAAEKLG 84 (175)
T ss_pred CCcEEEEeccCceec---------------------ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCH-HHHHhhhhhcC
Confidence 479999999999943 12566778899999999999999999999987 88888888888
Q ss_pred CCCCCcceeecCCCCH--HHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECC
Q psy8912 95 LNQYFSNKEIYPGQKT--THFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp--~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~ 152 (538)
+. + +....|| ..|.+|+++++++|++|+||||.. .||.+|+.+||+||.|..
T Consensus 85 v~----f--i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 85 VP----F--IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred Cc----e--eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 53 3 3344555 789999999999999999999996 699999999999999974
No 99
>PLN02811 hydrolase
Probab=99.48 E-value=1.6e-13 Score=134.65 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=94.1
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHH-HHHHcCCCCCCcceee-----c--CCCCHHHHHHHHHHcC--
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQ-ILNLINLNQYFSNKEI-----Y--PGQKTTHFESLKKATG-- 121 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~-~L~~lgL~~~Fd~ie~-----~--~~~Kp~~f~~ale~lg-- 121 (538)
....++||+.++|+.|+++|++++|+||+.. ..... .++..++.++|+.+.. . .+++|++|..++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~-~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHK-RHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCch-hhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 3577899999999999999999999999976 44443 3334467788887622 2 2345689999999997
Q ss_pred -CCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 122 -IEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 122 -i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
++|++|+||||+..|+++|+++|+.+|+|.++...... . ..+|+++.+..+
T Consensus 154 ~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~---~--~~~d~vi~~~~e 205 (220)
T PLN02811 154 PVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSY---C--KGADQVLSSLLD 205 (220)
T ss_pred CCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhh---h--hchhhHhcCHhh
Confidence 99999999999999999999999999999887644322 1 256777666544
No 100
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.47 E-value=2.3e-13 Score=143.09 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=97.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCC--------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS-------------- 81 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-------------- 81 (538)
.|+++||.||||+...... +.........++||+.++|+.|+++|++++|+||++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~-----------y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~ 70 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTD-----------FQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDP 70 (354)
T ss_pred CcEEEEeCCCCccCCCCcc-----------ccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhh
Confidence 5799999999997632111 112234568999999999999999999999999962
Q ss_pred -cHHHHHHHHHHcCCCCCCcceee----------cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEE
Q psy8912 82 -EILHAKQILNLINLNQYFSNKEI----------YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHS 150 (538)
Q Consensus 82 -~p~~~~~~L~~lgL~~~Fd~ie~----------~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V 150 (538)
. .....+++.+++. |+.+.. ..+++|.++..++++++++|++++||||+.+|+++|+++|+.+|++
T Consensus 71 ~~-~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 71 PH-NLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred HH-HHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 3 4566778888873 554311 2245678999999999999999999999999999999999999999
Q ss_pred CC
Q psy8912 151 WL 152 (538)
Q Consensus 151 ~~ 152 (538)
+.
T Consensus 148 ~~ 149 (354)
T PRK05446 148 AR 149 (354)
T ss_pred EC
Confidence 54
No 101
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.47 E-value=1.2e-13 Score=130.70 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=83.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++|++++++|++ . .++..|+++|+.+||+..... ..++++.|.++++++|++|++
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~-~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--K-NADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--h-hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 35789999999999999999999999987 3 678899999999999943221 113566799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEE
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|||+..|+++|+++|+.+|+|
T Consensus 162 ~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999986
No 102
>PLN02645 phosphoglycolate phosphatase
Probab=99.46 E-value=1.4e-13 Score=142.53 Aligned_cols=68 Identities=13% Similarity=0.010 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhh-CCCCCCEEEeCCc
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEAT-GIDYKDMIYFDDE 176 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l-~~~~~d~Ii~d~~ 176 (538)
+|.+|..+++++++++++|+||||+. .||.+|+++|+.+++|.+|....+..... ....||+++.+..
T Consensus 232 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~ 301 (311)
T PLN02645 232 STFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKIS 301 (311)
T ss_pred hHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHH
Confidence 34679999999999999999999997 89999999999999999998876654432 2356888887643
No 103
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.46 E-value=4.2e-13 Score=129.45 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=77.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee-------ecC--CCCHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-------IYP--GQKTTHFESLKKATGI 122 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie-------~~~--~~Kp~~f~~ale~lgi 122 (538)
....++||+.++|+.|+++ ++++|+||+.. ..++..++.+|+..+|+... ..+ ..+|.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFY-EFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcH-HHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 5677899999999999999 99999999999 99999999999988886431 111 1245556666777777
Q ss_pred CCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 123 EYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 123 ~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
.+++|+||||+.+|+.+++++|+.+
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 8899999999999999999999854
No 104
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.45 E-value=2.7e-13 Score=127.44 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=81.9
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCcEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~l 496 (538)
+.++||+.++|++|+++|++++++|++... . ...+.++|+.+||+..... .. ++++.|..+++++|++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~-~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRD-H-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchH-H-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 789999999999999999999999998755 4 5566669999999953321 12 346779999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEE
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+|||+..|+++|+++|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999975
No 105
>PLN02940 riboflavin kinase
Probab=99.45 E-value=2.2e-13 Score=145.06 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=89.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHh-hcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD-LFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~-~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
..+.++||+.++|++|+++|++++|+|++... .++..|+ .+|+.+||+.+.... .++++.|+.+++++|++|+
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~-~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRA-NIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHH-HHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 46789999999999999999999999999754 6777786 799999999533222 2346779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+..|+++|+++|+.+|+|+++..
T Consensus 169 ~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~ 198 (382)
T PLN02940 169 NCLVIEDSLPGVMAGKAAGMEVIAVPSIPK 198 (382)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence 999999999999999999999999999753
No 106
>PRK09449 dUMP phosphatase; Provisional
Probab=99.45 E-value=3e-13 Score=132.39 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=85.8
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIE 491 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~ 491 (538)
.+...+.++||+.++|++|+ +|++++|+|++.. +.++..|+++|+.+||+.+.... .++++.|.++++++|+.
T Consensus 89 ~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~ 166 (224)
T PRK09449 89 AMAEICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNP 166 (224)
T ss_pred HHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCC
Confidence 34445789999999999999 6899999998875 47888899999999999543322 24566799999999985
Q ss_pred -CCcEEEEeccc-ccHHhHcccCCEEEEECC
Q psy8912 492 -YKDMVFFDDEE-RNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 492 -pee~l~~eDs~-~~I~aAk~aGi~~i~V~d 520 (538)
+++|+||||+. +|+++|+++|++++.+.+
T Consensus 167 ~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 167 DRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred CcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 48999999998 699999999999999975
No 107
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.45 E-value=1.1e-13 Score=130.19 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=72.9
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cCCCCHHHHHHHHHHcCCCCCc
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~~~Kp~~f~~ale~lgi~P~e 126 (538)
....++||+.++|+ +++|+||++. ..++..++++|+..+|+.+ +. ..++.|++|..+++++|++|++
T Consensus 87 ~~~~~~~g~~~~L~-------~~~i~Tn~~~-~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~ 158 (175)
T TIGR01493 87 KNLPPWPDSAAALA-------RVAILSNASH-WAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDR 158 (175)
T ss_pred hcCCCCCchHHHHH-------HHhhhhCCCH-HHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHH
Confidence 35679999999998 3899999988 8999999999999999976 22 2345568999999999999999
Q ss_pred EEEEeCCcccHHHHhhc
Q psy8912 127 MVFFDDEERNSHDVSPL 143 (538)
Q Consensus 127 ~L~IGDs~~DI~aAk~a 143 (538)
|+||||+..|+.+|+++
T Consensus 159 ~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 159 VLMVAAHQWDLIGARKF 175 (175)
T ss_pred eEeEecChhhHHHHhcC
Confidence 99999999999999864
No 108
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.45 E-value=3.3e-13 Score=133.43 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=85.2
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---CCccccccc---eeecCCchHHHHHHHHHhCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---NWNQHFDHK---EIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---gL~~yFd~~---~i~~~~k~~~~~kal~~lgi~p 492 (538)
.....+|||+.++|++|+++|++++|+||++.. ..+.+++++ +|.+||+.. .++...+++.|.++++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~-~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVP-AQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 345679999999999999999999999998754 556667775 566666521 2333456788999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++|+||||+..|+++|+++|+.++.+.++-
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999997754
No 109
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.45 E-value=5.4e-13 Score=120.37 Aligned_cols=98 Identities=17% Similarity=0.156 Sum_probs=81.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCC--------chHHHHHHHhhcCCcccccccee-ecCCchHHHHHHHHHh-CC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTT--------EMLRAHQLVDLFNWNQHFDHKEI-FPGQKTTHFANLKKAT-GI 490 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~--------~~~~a~~~L~~lgL~~yFd~~~i-~~~~k~~~~~kal~~l-gi 490 (538)
+..++||+.++|++|+++|++++++|++. .. .++..++++++..+|..... ...++++.|+.+++++ ++
T Consensus 23 ~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 23 ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSG-RVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHH-HHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence 35689999999999999999999999886 43 67889999999744432111 1235678899999999 59
Q ss_pred CCCcEEEEec-ccccHHhHcccCCEEEEEC
Q psy8912 491 EYKDMVFFDD-EERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 491 ~pee~l~~eD-s~~~I~aAk~aGi~~i~V~ 519 (538)
+|++|+|||| +..|+.+|+++|+.+|.+.
T Consensus 102 ~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 102 DPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 9999999999 7999999999999999885
No 110
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.45 E-value=3.3e-13 Score=137.27 Aligned_cols=103 Identities=20% Similarity=0.296 Sum_probs=90.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---c--CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---P--GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~--~~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++|+|+++.+ .++.+|+++++..||+.+... . .++++.|+.+++++|++|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~-~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPER-FVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHH-HHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 4679999999999999999999999988754 788899999999999943222 1 134667999999999999999
Q ss_pred EEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 496 VFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 496 l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
++|||+.+|+++|+++|+++++|.+|.+.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~~ 206 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQCVALSYGYNH 206 (272)
T ss_pred EEECCCHHHHHHHHHCCCeEEEEecCCCC
Confidence 99999999999999999999999998653
No 111
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.45 E-value=3.2e-13 Score=140.64 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=83.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------e-----ecCCCCHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------E-----IYPGQKTTHFES 115 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e-----~~~~~Kp~~f~~ 115 (538)
....+++||+.++|+.|++.|++++|+|++.. ...+..++.+|+...|... . ....+|++.+..
T Consensus 177 ~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~-~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~ 255 (322)
T PRK11133 177 RENLPLMPGLTELVLKLQALGWKVAIASGGFT-YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTR 255 (322)
T ss_pred HHhCCCChhHHHHHHHHHHcCCEEEEEECCcc-hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHH
Confidence 44578999999999999999999999999988 8888899999987644311 0 113468899999
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
+++++|++|++|++|||+.+|+.+++.+|+..+.
T Consensus 256 la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 256 LAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999999999999997553
No 112
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.45 E-value=2.1e-13 Score=132.42 Aligned_cols=103 Identities=19% Similarity=0.157 Sum_probs=84.4
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchH-HHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEML-RAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~-~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
..+.++||+.++|++|+++|++++|+|++.... .....+..+++.+||+.+.... .+.++.|+.+++++|++|+
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 357899999999999999999999999876431 1333455678899999533221 2346679999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
+|+||||+..|+++|+++|+++|+|.++.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 99999999999999999999999998753
No 113
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.44 E-value=3.9e-13 Score=134.16 Aligned_cols=212 Identities=9% Similarity=0.040 Sum_probs=138.3
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeeccccccchh-hhHHhhhCCCc-ccccccccCcch-hhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTVHIRNA-YSLLHLLGLSD-FFDYKEIFPAEK-KIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 377 (538)
+-|-.|++. .+||.+++.|+.|+++|++++++|=++..... ...|..+|+.. .| ++|+++.. -..++..+.+
T Consensus 12 ~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~--~~Ii~s~~~~~~~l~~~~~ 89 (242)
T TIGR01459 12 LLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP--EMIISSGEIAVQMILESKK 89 (242)
T ss_pred EEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc--ceEEccHHHHHHHHHhhhh
Confidence 346666654 57999999999999999999999887664322 26889999986 76 48888842 2345554444
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccc-ccc-ccc-hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIG-IQV-HRD-KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA 454 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~-i~~-~~~-~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a 454 (538)
..+.+-...+++=-...++..+....... ... ... .+.........-||++.++|+.|+++|+++ |+|+++.. ++
T Consensus 90 ~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~~~~l~~l~~~g~~~-i~tN~d~~-~~ 167 (242)
T TIGR01459 90 RFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRSENEKLDLDEFDELFAPIVARKIPN-ICANPDRG-IN 167 (242)
T ss_pred hccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCCCcccCCHHHHHHHHHHHHhCCCcE-EEECCCEe-cc
Confidence 43443333333321122333221111100 000 000 011101001123799999999999999998 88988754 66
Q ss_pred HHHHhhcCCccccccce-----e--ecCCchHHHHHHHHHhCCC-CCcEEEEecc-cccHHhHcccCCEEEEEC
Q psy8912 455 HQLVDLFNWNQHFDHKE-----I--FPGQKTTHFANLKKATGIE-YKDMVFFDDE-ERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 455 ~~~L~~lgL~~yFd~~~-----i--~~~~k~~~~~kal~~lgi~-pee~l~~eDs-~~~I~aAk~aGi~~i~V~ 519 (538)
...+..++...||...+ . ...+++..|..+++++|.. +++|++|||+ .+||.+|+++|+.++.|.
T Consensus 168 ~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 168 QHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred CCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 66678888887777321 1 1224566799999999975 6799999999 699999999999999984
No 114
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.44 E-value=3.1e-13 Score=124.61 Aligned_cols=98 Identities=16% Similarity=0.269 Sum_probs=86.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|+.|+++|++++++|+++. ..++..|+++|+.++|+...+.. .++++.|..+++++|++|++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 4678999999999999999999999999874 57888999999999999433322 13457799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEE
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|||+..|+++|+++|+.+|+|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
No 115
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.44 E-value=1.3e-12 Score=131.22 Aligned_cols=66 Identities=8% Similarity=-0.020 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|++|..++++++++|++|+||||+. .|+.+|+++|+++++|.+|....+.... ....||+++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~-~~~~pd~~v~~l 246 (249)
T TIGR01457 180 NAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG-LPIAPTHVVSSL 246 (249)
T ss_pred hHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc-CCCCCCEEeCCh
Confidence 35789999999999999999999997 7999999999999999999876554433 224688887654
No 116
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.44 E-value=2.6e-13 Score=128.94 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=83.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++|| .++|++|+++ ++++|+|+++.. .++..|+++|+.+||+.+.... .++++.|.++++++|++|++
T Consensus 85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESA-IAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred ccCCCccH-HHHHHHHHhC-CCEEEEcCCchH-HHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 34678896 5899999876 899999998754 8888999999999999533221 14567799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECC
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
||||||+.+|+++|+++|+.+|+|..
T Consensus 162 ~l~igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 162 CVVFEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred eEEEeccHhhHHHHHHCCCEEEeecC
Confidence 99999999999999999999999974
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.43 E-value=1.7e-12 Score=133.03 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=99.3
Q ss_pred ccceEEeecC---CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHh
Q psy8912 383 YKDMVFFDDE---ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVD 459 (538)
Q Consensus 383 ~~~l~~~Dld---h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~ 459 (538)
.+.+++||+| ..+... .||. +. ......++||+.++|+.|+++|++++++|+++.. .++..++
T Consensus 157 ~~~~~~~D~dgtl~~~~~~-~~~~-----------~~-~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~-~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGR-SPYD-----------WT-KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGV-CEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCC-Cccc-----------hh-hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChh-hHHHHHH
Confidence 4579999999 222221 2322 00 1123578999999999999999999999999764 8889999
Q ss_pred hcCCcc-ccccceeec------------CCchHHHHHHHHHhCC-CCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 460 LFNWNQ-HFDHKEIFP------------GQKTTHFANLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 460 ~lgL~~-yFd~~~i~~------------~~k~~~~~kal~~lgi-~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.+++.+ ||+.....+ .+.+..++.++++++. +|++|++|||+.+|+++|+++|+.+++|.||
T Consensus 223 ~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 223 WLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 999997 998443333 2346679999999998 6899999999999999999999999999997
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.42 E-value=5.5e-13 Score=136.72 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=84.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee-e---cC--CchHHHHHHHHHhCCCCCc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI-F---PG--QKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i-~---~~--~k~~~~~kal~~lgi~pee 494 (538)
+.++||+.++|++|+++|++++|+|+++.. .+..+|+.++...+|+.. .+ . .. ++++.|.++++++|++|++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEK-AVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 689999999999999999999999998754 667788877544555421 11 1 12 3466799999999999999
Q ss_pred EEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 495 MVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
|+||||+.+|+++|+++|+.+|+|.+|...
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~ 251 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTA 251 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCcc
Confidence 999999999999999999999999998654
No 119
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.42 E-value=9.6e-13 Score=128.36 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=90.4
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCC
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pe 493 (538)
.....++||+.++|++|+++|++++++|++.. ..++..++++|+.++|+...... .++++.|.+++++++++|+
T Consensus 89 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 167 (226)
T PRK13222 89 AGGSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167 (226)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChh
Confidence 34578999999999999999999999998874 47888999999999999422211 1356779999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
+|++|||+.+|+++|+++|+.+++|.||..
T Consensus 168 ~~i~igD~~~Di~~a~~~g~~~i~v~~g~~ 197 (226)
T PRK13222 168 EMLFVGDSRNDIQAARAAGCPSVGVTYGYN 197 (226)
T ss_pred heEEECCCHHHHHHHHHCCCcEEEECcCCC
Confidence 999999999999999999999999999865
No 120
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.42 E-value=5.5e-13 Score=126.76 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=91.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+++||+||||.+..+.-.. .......+...+| ..++.|+++|++++|+||++. ..++..++.+|
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~----------~g~~~~~~~~~D~--~~~~~L~~~Gi~laIiT~k~~-~~~~~~l~~lg 72 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVIND----------EGIESRNFDIKDG--MGVIVLQLCGIDVAIITSKKS-GAVRHRAEELK 72 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcC----------CCcEEEEEecchH--HHHHHHHHCCCEEEEEECCCc-HHHHHHHHHCC
Confidence 3899999999999542100000 0000111122222 357889999999999999999 99999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
+..+|+.+ ++||+.|..++++++++|++|++|||+.+|+.+++.+|+..+
T Consensus 73 i~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 73 IKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred CcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 99888863 578999999999999999999999999999999999999754
No 121
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.41 E-value=8.5e-13 Score=133.28 Aligned_cols=205 Identities=16% Similarity=0.158 Sum_probs=142.1
Q ss_pred cccccccccc-------cccchHHHHHHhhhcCcceeeecccccc--chhhhHHhhhCCCcccccccccCcchhhhhh-h
Q psy8912 304 VEDAKGTLLN-------LYRDIPEIVKYLKDHNIKLALASRTVHI--RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHF-A 373 (538)
Q Consensus 304 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 373 (538)
+-|-.|||.+ ++|.+.+.|+.|+++|++.+++|=.++. .-....|..+|+. +...||++|..-+.++ +
T Consensus 5 ~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~--~~~~~i~ts~~~~~~~l~ 82 (257)
T TIGR01458 5 LLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD--ISEDEVFTPAPAARQLLE 82 (257)
T ss_pred EEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC--CCHHHeEcHHHHHHHHHH
Confidence 4577888886 8999999999999999999999954333 3466778889986 7889999995444433 3
Q ss_pred hcccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHH
Q psy8912 374 NLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLR 453 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~ 453 (538)
... ....++.=+ + ..+.++.+. .. ....+.-.+...--.|+++.+.++.|++.|++++++|+++.. .
T Consensus 83 ~~~-----~~~~~~g~~-~--~~~~~~~~~---~~-~~~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~iatn~~~~-~ 149 (257)
T TIGR01458 83 EKQ-----LRPMLLVDD-R--VLPDFDGID---TS-DPNCVVMGLAPEHFSYQILNQAFRLLLDGAKPLLIAIGKGRY-Y 149 (257)
T ss_pred hcC-----CCeEEEECc-c--HHHHhccCC---CC-CCCEEEEecccCccCHHHHHHHHHHHHcCCCCEEEEeCCCCC-C
Confidence 311 111222211 1 011111100 00 001111111111224789999999999999999999988754 5
Q ss_pred HHHHHhhcCCcccccccee--------ecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 454 AHQLVDLFNWNQHFDHKEI--------FPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 454 a~~~L~~lgL~~yFd~~~i--------~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
....+..+|+..||+.... ...+++..|..+++++|++|++|++|||+. +||.+|+++|+++++|.+|.+
T Consensus 150 ~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~ 228 (257)
T TIGR01458 150 KRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKY 228 (257)
T ss_pred cCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence 5566778899999983221 123457779999999999999999999996 999999999999999999964
No 122
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.41 E-value=2.3e-13 Score=130.55 Aligned_cols=135 Identities=10% Similarity=0.036 Sum_probs=98.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+|+|+||+||||.+..+... .. +.........+ ...++.|+++|++++|+||.+. ..+...++.+|
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~-~~---------~~~~~~~~~~d--~~~i~~L~~~Gi~v~I~T~~~~-~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMG-NN---------GEELKAFNVRD--GYGIRCLLTSGIEVAIITGRKS-KLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEc-CC---------CCEEEEEeccc--hHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcC
Confidence 489999999999965311000 00 00000011111 2468889999999999999988 89999999999
Q ss_pred CCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 95 LNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 95 L~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+..+|+. ...|++.+..+++++|++|++|+||||+.+|+.+++++|+.+ .+.++ .. .....+++++..
T Consensus 87 l~~~f~g----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~~~---~~----~~~~~a~~v~~~ 154 (183)
T PRK09484 87 ITHLYQG----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVADA---HP----LLLPRADYVTRI 154 (183)
T ss_pred CceeecC----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE-ecCCh---hH----HHHHhCCEEecC
Confidence 9888874 346789999999999999999999999999999999999984 45321 11 112356888764
No 123
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.41 E-value=8.9e-13 Score=128.27 Aligned_cols=101 Identities=8% Similarity=0.041 Sum_probs=87.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHh-CCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKAT-GIEYK 493 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~l-gi~pe 493 (538)
..+.++||+.++|++|+++ ++++|+|++... .++..|+.+|+..||+.+.... .++++.|.++++++ |++|+
T Consensus 94 ~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 171 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQK-FRLYIVTNGVRE-TQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKE 171 (224)
T ss_pred ccCeeCccHHHHHHHHHhc-CcEEEEeCCchH-HHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCch
Confidence 3478999999999999999 999999998754 7788999999999999533322 14566799999999 99999
Q ss_pred cEEEEeccc-ccHHhHcccCCEEEEECCCC
Q psy8912 494 DMVFFDDEE-RNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 494 e~l~~eDs~-~~I~aAk~aGi~~i~V~dg~ 522 (538)
+||||||+. .|+++|+++|+.+|.+.++.
T Consensus 172 ~~v~igD~~~~di~~A~~~G~~~i~~~~~~ 201 (224)
T TIGR02254 172 EVLMIGDSLTADIKGGQNAGLDTCWMNPDM 201 (224)
T ss_pred heEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 999999998 79999999999999998863
No 124
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.41 E-value=8.9e-14 Score=128.94 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=94.5
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHH------hhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVM------DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~------~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
+.+++|+||||......... +.... .... ......+.++||+.++|+.|+ ++++++|+||++. ..++.++
T Consensus 3 ~~lvldld~tl~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~-~~~~~il 78 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFK-EWTNR-DFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLR-MYADPVL 78 (148)
T ss_pred cEEEEeCCCCeECCCCCcCC-CCCcc-ceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcH-HHHHHHH
Confidence 57999999999653211100 00000 0000 012345678999999999999 5799999999999 9999999
Q ss_pred HHcCCCCC-Ccce---eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 91 NLINLNQY-FSNK---EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 91 ~~lgL~~~-Fd~i---e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
+.+++..+ |+.+ +.....||. |.++++++|++|++|++|||+..|+++|+++|+.+
T Consensus 79 ~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 79 DLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred HHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 99998654 5765 333445777 99999999999999999999999999999999874
No 125
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.40 E-value=1.3e-12 Score=124.03 Aligned_cols=107 Identities=12% Similarity=0.045 Sum_probs=89.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
..++||+.++|++|+++|++++++|+++....+..+++.+|+..++. ...++++.|..+++++|++|++|+||||+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs 117 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDR 117 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCc
Confidence 46899999999999999999999999873346777788888865543 22456788999999999999999999999
Q ss_pred c-ccHHhHcccCCEEEEECCCCC-HHHHHHHHH
Q psy8912 502 E-RNSHDVSPLGVTCIHVKDGMS-HSVLHKGLK 532 (538)
Q Consensus 502 ~-~~I~aAk~aGi~~i~V~dg~t-~~~~~~~l~ 532 (538)
. .|+++|+++|+.+|+|.+|.. .+.|..++.
T Consensus 118 ~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~ 150 (170)
T TIGR01668 118 LFTDVMGGNRNGSYTILVEPLVHPDQWFIKRIW 150 (170)
T ss_pred chHHHHHHHHcCCeEEEEccCcCCccccchhhH
Confidence 8 699999999999999999864 455655553
No 126
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.40 E-value=1.3e-12 Score=123.85 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=89.0
Q ss_pred cCcCCCccceEEeecC-CCCc--CCCCCCcccccccccchHhhhcCCCCc-cCCCHHHHHHHHHHCCceEEEEeCCCch-
Q psy8912 377 KDSKIKYKDMVFFDDE-ERNA--RSISKLGVIGIQVHRDKVLDAGGAIIK-YYRDVPAILKYLKQNNCLVAAASRTTEM- 451 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-h~~~--s~~~p~~~i~i~~~~~~i~d~~~~~v~-l~pGv~e~L~~Lk~~GiklaIASss~~~- 451 (538)
|.++|+. .+++||+| -.+. |.. +|- . ....+. +|||+.++|++|+++|++++|+|+++..
T Consensus 7 ~~~~~~~-k~~~~D~Dgtl~~~~~~~-~~~-----------~--~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~ 71 (166)
T TIGR01664 7 DGPKPQS-KVAAFDLDGTLITTRSGK-VFP-----------T--SASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIG 71 (166)
T ss_pred CCCCCcC-cEEEEeCCCceEecCCCC-ccc-----------C--ChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccc
Confidence 5688855 67889999 2111 111 110 0 111233 7899999999999999999999987642
Q ss_pred ----------HHHHHHHhhcCCccccccceee-----cCCchHHHHHHHHHhC--CCCCcEEEEeccc--------ccHH
Q psy8912 452 ----------LRAHQLVDLFNWNQHFDHKEIF-----PGQKTTHFANLKKATG--IEYKDMVFFDDEE--------RNSH 506 (538)
Q Consensus 452 ----------~~a~~~L~~lgL~~yFd~~~i~-----~~~k~~~~~kal~~lg--i~pee~l~~eDs~--------~~I~ 506 (538)
..++.+|+++|+.. +. .... ..++++.++.+++++| ++|++|+||||+. .|++
T Consensus 72 ~~~~~~~~~~~~i~~~l~~~gl~~-~~-ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~ 149 (166)
T TIGR01664 72 RGKLSAESFKNKIEAFLEKLKVPI-QV-LAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIK 149 (166)
T ss_pred cCcccHHHHHHHHHHHHHHcCCCE-EE-EEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHH
Confidence 24677899999954 22 1111 1134667999999999 9999999999996 6999
Q ss_pred hHcccCCEEE
Q psy8912 507 DVSPLGVTCI 516 (538)
Q Consensus 507 aAk~aGi~~i 516 (538)
+|+++|+.++
T Consensus 150 aA~~aGi~~~ 159 (166)
T TIGR01664 150 FAKNLGLEFK 159 (166)
T ss_pred HHHHCCCCcC
Confidence 9999999985
No 127
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.39 E-value=9.5e-13 Score=143.30 Aligned_cols=101 Identities=17% Similarity=0.239 Sum_probs=88.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec----CCchHHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP----GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~----~~k~~~~~kal~~lgi~pee~l 496 (538)
...+|||+.++|++|+++|++++|+|++... .++..|+++|+.+||+...... .+|++.|..+++++ +|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~-~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTE-YLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 5789999999999999999999999999764 8899999999999999543322 25788899999876 579999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+|||+.+|+++|+++|+.+|+|+||...
T Consensus 405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~~ 432 (459)
T PRK06698 405 VVGDRLSDINAAKDNGLIAIGCNFDFAQ 432 (459)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEeCCCCc
Confidence 9999999999999999999999998643
No 128
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.39 E-value=1.5e-12 Score=130.13 Aligned_cols=144 Identities=11% Similarity=0.069 Sum_probs=99.6
Q ss_pred hcccCcCCCccceEEeecC--CCCcCC---C--CCCccccccc-cc----chHhhhcCCCCccCCCHHHHHHHHHHCCce
Q psy8912 374 NLKKDSKIKYKDMVFFDDE--ERNARS---I--SKLGVIGIQV-HR----DKVLDAGGAIIKYYRDVPAILKYLKQNNCL 441 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dld--h~~~s~---~--~p~~~i~i~~-~~----~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gik 441 (538)
.|++.-+-+.|..++|||| =.|.|. . +.+.--.++. .+ +........+..+++++.++|++|+++|++
T Consensus 53 ~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~ 132 (237)
T TIGR01672 53 QIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDA 132 (237)
T ss_pred HHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCE
Confidence 4555555667999999999 222222 1 1111000011 11 222223344557788899999999999999
Q ss_pred EEEEeCCC---chHHHHHHHhhcCCccccccceeecC-----CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 442 VAAASRTT---EMLRAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 442 laIASss~---~~~~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
++++|++. .+..++.+++++|+.+||+. +..+ .|++.. .+++++++ ++||||+.+||.+|++||+
T Consensus 133 i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~--i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 133 IFFVTGRTPGKTDTVSKTLAKNFHIPAMNPV--IFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHhCCchheeE--EECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCC
Confidence 99999872 23478889999999999983 3332 344444 45666776 8999999999999999999
Q ss_pred EEEEECCCCCH
Q psy8912 514 TCIHVKDGMSH 524 (538)
Q Consensus 514 ~~i~V~dg~t~ 524 (538)
.+++|.||.+.
T Consensus 206 ~~I~V~~g~~s 216 (237)
T TIGR01672 206 RGIRILRASNS 216 (237)
T ss_pred CEEEEEecCCC
Confidence 99999998654
No 129
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.38 E-value=1.5e-12 Score=127.32 Aligned_cols=99 Identities=8% Similarity=0.041 Sum_probs=84.1
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-ceee---cC--CchHHHHHHHHHhCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEIF---PG--QKTTHFANLKKATGIE 491 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i~---~~--~k~~~~~kal~~lgi~ 491 (538)
+...+.++||+.++|+.| +++++|+|++.. +.++..|+++|+.+||+. .... .. ++++.|..+++++|++
T Consensus 83 ~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~ 158 (221)
T PRK10563 83 FDSELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN 158 (221)
T ss_pred HHccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence 334688999999999999 499999999875 478889999999999962 2221 11 4577799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|++|+||||+..||++|+++|+.++.+..
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECC
Confidence 99999999999999999999999999854
No 130
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.38 E-value=3.2e-12 Score=125.49 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=74.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CC--cce---ee--cCCCCHHH---------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YF--SNK---EI--YPGQKTTH--------- 112 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~F--d~i---e~--~~~~Kp~~--------- 112 (538)
.....++||+.++|+.|+++|++++|+||+.. ..++.+++.+ +.. .+ +.. +. ...+.|..
T Consensus 70 ~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 70 LETAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred HhCCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 45678999999999999999999999999998 8999999988 643 22 111 00 11122221
Q ss_pred -HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 113 -FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 113 -f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
...++++++..+.+|+||||+.+|+.+|+++|+.+
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 35788999999999999999999999999999943
No 131
>KOG3109|consensus
Probab=99.38 E-value=3.6e-12 Score=123.48 Aligned_cols=99 Identities=22% Similarity=0.273 Sum_probs=86.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-----------cCCCCHHHHHHHHHHcC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----------YPGQKTTHFESLKKATG 121 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-----------~~~~Kp~~f~~ale~lg 121 (538)
.++|.+-.+++|-.|+.++ .++.||+.. ..+..+|+.+|+.+.|+.+.. .+++.++.|+.+++..|
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~ag 174 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAG 174 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhC
Confidence 3777788999999999886 899999999 999999999999999998722 22333488999999999
Q ss_pred CC-CCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 122 IE-YKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 122 i~-P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+. |.+++||+||.++|++|++.|+.++++....
T Consensus 175 i~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 175 IDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 98 9999999999999999999999999997543
No 132
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.37 E-value=3.8e-12 Score=127.13 Aligned_cols=135 Identities=11% Similarity=0.030 Sum_probs=95.0
Q ss_pred ceEEEeCCCCCChh--h---Hhhhh-c---hh--HHHHHHHHhh-hcCCCccCCCHHHHHHHhhhCCceEEEEcCCC---
Q psy8912 17 KMVVFDLDYTLWPL--H---VHDLV-A---PF--KKIGQKVMDA-KGTLIKYYRGVPEILRYLKENKCLVAAASRTS--- 81 (538)
Q Consensus 17 KaVIFDlDGTLw~~--~---~~~~i-~---~~--~~~~~~i~~~-~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~--- 81 (538)
-+|+||+|||+.+. . ..... + ++ .+.+...+.. ......++||+.++|+.|+++|++++++||++
T Consensus 64 ~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k 143 (237)
T PRK11009 64 MAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATK 143 (237)
T ss_pred cEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 39999999999642 1 11111 1 12 2222333332 35567899999999999999999999999964
Q ss_pred cHHHHHHHHHHcCC--CCCCcceeecC-CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCc
Q psy8912 82 EILHAKQILNLINL--NQYFSNKEIYP-GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 82 ~p~~~~~~L~~lgL--~~~Fd~ie~~~-~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
....++.+++.+|+ .++|+.+-... ..|+... .+++++++ ++||||+..|+.+|+++|+.+|.|.||...
T Consensus 144 ~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 144 TETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred cHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 21566777777999 78887642111 1233322 25566776 999999999999999999999999998763
No 133
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.37 E-value=2.2e-12 Score=121.89 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=77.2
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-------------------------cC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------------------YP 106 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-------------------------~~ 106 (538)
....++||+.++|+.|+++|++++|+||+.. ..++..++.+++..+|+.+.. .+
T Consensus 69 ~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 69 KSAPIDPGFKEFIAFIKEHGIDFIVISDGND-FFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred HhCCCCccHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 3468999999999999999999999999988 889999999999999887521 01
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 107 GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
..|++.+..+.++. |++|+||||+.+|+.+|+++++-+
T Consensus 148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 13677787776654 899999999999999999987653
No 134
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.37 E-value=4.5e-12 Score=128.52 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|.+|..++++++.++++|+||||+. .||.+|+++||.+++|.+|....+..... +..|+++..+..
T Consensus 193 ~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~-~~~p~~v~~sl~ 259 (269)
T COG0647 193 PAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTYVVDSLA 259 (269)
T ss_pred HHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh-ccCCcchHhhHH
Confidence 3679999999999999999999996 59999999999999999999877765533 567787776543
No 135
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.37 E-value=1.8e-12 Score=125.05 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=80.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---C--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---G--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~--~k~~~~~kal~~lgi~pee~ 495 (538)
...++||+.++|++|+++|++++|+|++.. ..+..|+++|+.+||+.+.... . ++++.|.++++++|++|++|
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDS--RLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEA 180 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHE
Confidence 357899999999999999999999998753 4578899999999999433221 1 34566999999999999999
Q ss_pred EEEeccc-ccHHhHcccCCEEE
Q psy8912 496 VFFDDEE-RNSHDVSPLGVTCI 516 (538)
Q Consensus 496 l~~eDs~-~~I~aAk~aGi~~i 516 (538)
++|||+. .||++|+++|+++|
T Consensus 181 ~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred EEECCCchHHHHHHHHcCCeee
Confidence 9999997 89999999999987
No 136
>COG4996 Predicted phosphatase [General function prediction only]
Probab=99.34 E-value=1.5e-12 Score=116.64 Aligned_cols=133 Identities=28% Similarity=0.492 Sum_probs=108.2
Q ss_pred ceEEEeCCCCCChhhHhhhh-chhHHHH-HHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 17 KMVVFDLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i-~~~~~~~-~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++++||+|||||++.-.+.+ |||++.. ..+.++....+++||.++++++++|++|+.++.+|-+.. ..+-+.|+.++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~-~kA~~aLral~ 79 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALD 79 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch-HHHHHHHHHhc
Confidence 37999999999998866666 9999888 777788888999999999999999999999999999977 89999999999
Q ss_pred CCCCCcceeecCCC-CHHHHHHHHHH------cCCCCCcEEEEeCCcccHHHHhh-cC-CeEEEE
Q psy8912 95 LNQYFSNKEIYPGQ-KTTHFESLKKA------TGIEYKDMVFFDDEERNSHDVSP-LG-VTCIHS 150 (538)
Q Consensus 95 L~~~Fd~ie~~~~~-Kp~~f~~ale~------lgi~P~e~L~IGDs~~DI~aAk~-aG-~~tI~V 150 (538)
+.+||+.+.+-|.+ |-.|..+++++ ..++|++++|++|+..-+..-.. .| ++|+..
T Consensus 80 ~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~ 144 (164)
T COG4996 80 LLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEM 144 (164)
T ss_pred hhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEe
Confidence 99999998776665 33555444443 45899999999999776555554 33 345444
No 137
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.34 E-value=2.3e-12 Score=122.62 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=81.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---------CCchHHHHHHHHHhCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---------GQKTTHFANLKKATGIE 491 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---------~~k~~~~~kal~~lgi~ 491 (538)
.+.++||+.++|++|+ ++++|+|+++.. .+...|+.+|+.+||+.+.... .++++.|+++++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~-~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRA-HARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHH-HHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 4678999999999997 589999998754 7889999999999999433321 23466799999999999
Q ss_pred CCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 492 YKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 492 pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
|++|+||||+..|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999875
No 138
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.33 E-value=3.8e-12 Score=129.81 Aligned_cols=214 Identities=13% Similarity=0.116 Sum_probs=135.0
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeec-cccccchh-hhHHhhhCCCcccccccccCcchhhhhh-hhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALAS-RTVHIRNA-YSLLHLLGLSDFFDYKEIFPAEKKIKHF-ANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 377 (538)
+-|-.|+|. ..||.+.+.++.|+++|++++++| |+...+.. ..-|..+|+. ....||++|..-+.+| +....
T Consensus 6 ~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~--~~~~~i~ts~~~~~~~l~~~~~ 83 (279)
T TIGR01452 6 IFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN--GLAEQLFSSALCAARLLRQPPD 83 (279)
T ss_pred EEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CChhhEecHHHHHHHHHHhhCc
Confidence 457888886 579999999999999999999987 55433322 2456778985 4579999995444433 33111
Q ss_pred CcCCCccceEEeecC-------CCCcCCC--C---------CC-cccccccccchHhhhcCCCCccCCCHHHHHHHHHHC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNARSI--S---------KL-GVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQN 438 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~s~~--~---------p~-~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~ 438 (538)
. ...+.++=-+ +..+.-. + +. ...........+.=.+.. ---|+|+.++|++|+++
T Consensus 84 ~----~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d~-~~~y~~i~~~l~~L~~~ 158 (279)
T TIGR01452 84 A----PKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDE-HFSYAKLREACAHLREP 158 (279)
T ss_pred C----CCEEEEEcCHHHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecCC-CCCHHHHHHHHHHHhcC
Confidence 1 1123332111 1111100 0 00 000000001111111111 22489999999999999
Q ss_pred CceEEEEeCCCchHHHHHHHhhcCCcccccccee------e--cCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHc
Q psy8912 439 NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI------F--PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVS 509 (538)
Q Consensus 439 GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i------~--~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk 509 (538)
|+ ++|+|+++........+...|+..||+.... . ..+.+..|..+++++|++|++|+||||+ ..||++|+
T Consensus 159 g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~ 237 (279)
T TIGR01452 159 GC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGH 237 (279)
T ss_pred CC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHH
Confidence 97 8999987643111123445677777773221 1 1234567999999999999999999999 59999999
Q ss_pred ccCCEEEEECCCCCHH
Q psy8912 510 PLGVTCIHVKDGMSHS 525 (538)
Q Consensus 510 ~aGi~~i~V~dg~t~~ 525 (538)
++|+++++|.||.+..
T Consensus 238 ~aGi~si~V~~G~~~~ 253 (279)
T TIGR01452 238 RCGMTTVLVLSGVSRL 253 (279)
T ss_pred HcCCcEEEECCCCCCH
Confidence 9999999999997754
No 139
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.31 E-value=1.3e-11 Score=123.34 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=100.9
Q ss_pred hhhcccCcCCCccceEEeecC--CCCcCCCCCCcccccc-c--------ccchHhhh----cCCCCccCCCHHHHHHHHH
Q psy8912 372 FANLKKDSKIKYKDMVFFDDE--ERNARSISKLGVIGIQ-V--------HRDKVLDA----GGAIIKYYRDVPAILKYLK 436 (538)
Q Consensus 372 ~~~~~~~~~~~~~~l~~~Dld--h~~~s~~~p~~~i~i~-~--------~~~~i~d~----~~~~v~l~pGv~e~L~~Lk 436 (538)
+..|++.-+-+.|..++||+| -.|.|... |. +.. + ......+. ......++||+.++|++|+
T Consensus 51 ~~~~~~~~~~~~p~av~~DIDeTvldnsp~~-~~--~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 51 VAQIEKSLEGRPPMAVGFDIDDTVLFSSPGF-WR--GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred HHHhhhhccCCCCcEEEEECcCccccCCchh-ee--eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 356777778888999999999 34443211 11 111 1 11111222 2335678999999999999
Q ss_pred HCCceEEEEeCCC---chHHHHHHHhhcCC--ccccccceeecCC---chHHHHHHHHHhCCCCCcEEEEecccccHHhH
Q psy8912 437 QNNCLVAAASRTT---EMLRAHQLVDLFNW--NQHFDHKEIFPGQ---KTTHFANLKKATGIEYKDMVFFDDEERNSHDV 508 (538)
Q Consensus 437 ~~GiklaIASss~---~~~~a~~~L~~lgL--~~yFd~~~i~~~~---k~~~~~kal~~lgi~pee~l~~eDs~~~I~aA 508 (538)
++|++++++|+.. ....++.+++.+|+ .++|+. +..++ |.... .+++++++ +|||||+.+|+++|
T Consensus 128 ~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v--il~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA 200 (237)
T PRK11009 128 KRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV--IFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAA 200 (237)
T ss_pred HCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE--EEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHH
Confidence 9999999999843 23367777888999 899983 33332 33332 35566665 99999999999999
Q ss_pred cccCCEEEEECCCCCH
Q psy8912 509 SPLGVTCIHVKDGMSH 524 (538)
Q Consensus 509 k~aGi~~i~V~dg~t~ 524 (538)
++||+.+++|.||++.
T Consensus 201 ~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 201 REAGARGIRILRAANS 216 (237)
T ss_pred HHcCCcEEEEecCCCC
Confidence 9999999999998764
No 140
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.29 E-value=1.1e-11 Score=147.12 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=90.0
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc-cccccceeec-----CCchHHHHHHHHHhCCCCCcEE
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEIFP-----GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~-~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~l 496 (538)
.++||+.++|++|+++|++++|+|++... .++..|+++|+. .||+...... .++++.|+++++++|++|++||
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~-~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRI-KVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHH-HHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 47999999999999999999999998754 888899999996 7999433222 2457789999999999999999
Q ss_pred EEecccccHHhHcccCCEEEEECCCCCHHH
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
||||+..|+++|+++|+.+|+|.++.+.++
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~ 269 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCIAVTTTLSEEI 269 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 999999999999999999999999876544
No 141
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.27 E-value=1.1e-11 Score=123.31 Aligned_cols=95 Identities=11% Similarity=0.126 Sum_probs=80.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee 494 (538)
..+.++||+.++|++|+++ ++++++|+++.. ++.+||.+||+.+.... .++++.|.++++++|++|++
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 182 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGE 182 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch------HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhH
Confidence 4578999999999999976 999999987643 48899999999533221 14567799999999999999
Q ss_pred EEEEecc-cccHHhHcccCCEEEEECCC
Q psy8912 495 MVFFDDE-ERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 495 ~l~~eDs-~~~I~aAk~aGi~~i~V~dg 521 (538)
|++|||+ ..|+.+|+++|+.++.|..+
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 9999999 59999999999999999764
No 142
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.27 E-value=5.4e-11 Score=125.27 Aligned_cols=136 Identities=13% Similarity=0.164 Sum_probs=103.3
Q ss_pred cceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC-------------
Q psy8912 384 KDMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT------------- 449 (538)
Q Consensus 384 ~~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~------------- 449 (538)
..+++||-| ..+..-...|. ..+...+.+|||+.++|++|+++|++++|+|+++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~ 69 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQ------------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFD 69 (354)
T ss_pred CcEEEEeCCCCccCCCCcccc------------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHh
Confidence 458999999 33331111222 1233458899999999999999999999999851
Q ss_pred -chHHHHHHHhhcCCccccccceee----------cCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 -EMLRAHQLVDLFNWNQHFDHKEIF----------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 -~~~~a~~~L~~lgL~~yFd~~~i~----------~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
..+.+..+++.+|+. |+...+. ..+++..+..++++++++|++++||||+..|+++|+++|+++|.|
T Consensus 70 ~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 70 PPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred hHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 123567788999984 6532222 124567799999999999999999999999999999999999999
Q ss_pred -CCCCCHHHHHHHHHH
Q psy8912 519 -KDGMSHSVLHKGLKQ 533 (538)
Q Consensus 519 -~dg~t~~~~~~~l~~ 533 (538)
+++++|++..+-|..
T Consensus 148 ~~~~~~~~~i~~~l~~ 163 (354)
T PRK05446 148 ARETLNWDAIAEQLTK 163 (354)
T ss_pred ECCCCCHHHHHHHHhc
Confidence 668999987776653
No 143
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.27 E-value=1.1e-11 Score=128.90 Aligned_cols=90 Identities=21% Similarity=0.281 Sum_probs=83.4
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh----cCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL----FNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~----lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
+|||+.++|++|+++|++++|+|+++. ..+..+|++ +++.+||+...+...+|++.+.++++++|+.|++|||||
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 689999999999999999999999975 588999999 999999997767777899999999999999999999999
Q ss_pred cccccHHhHcccCCE
Q psy8912 500 DEERNSHDVSPLGVT 514 (538)
Q Consensus 500 Ds~~~I~aAk~aGi~ 514 (538)
|+..++.++++++..
T Consensus 111 D~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 111 DNPAERANVKITLPV 125 (320)
T ss_pred CCHHHHHHHHHHCCC
Confidence 999999999997764
No 144
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.26 E-value=2.8e-11 Score=106.24 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=84.4
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---------------------CCc
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---------------------GQK 477 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---------------------~~k 477 (538)
.....++||+.++|+.|+++|++++++|++.. ..++..++.+++..+|+...... .++
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 45688999999999999999999999999875 48889999999987777321111 346
Q ss_pred hHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 478 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 478 ~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+..+..++++++.+++++++|||+..|+++|+++|+.+++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 99 PDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 77799999999999999999999999999999999999875
No 145
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.25 E-value=1.5e-11 Score=114.90 Aligned_cols=86 Identities=9% Similarity=0.169 Sum_probs=78.6
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
+|++|+++|++++|+|+++.. .++.+++++|+.+||+. ..+|++.+.++++++|++|++|+||||+.+|+.++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~-~~~~~l~~~gi~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ 110 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAK-LVEDRCKTLGITHLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEK 110 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCH-HHHHHHHHcCCCEEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 899999999999999999865 78899999999999983 3578999999999999999999999999999999999
Q ss_pred cCCEEEEECCCC
Q psy8912 511 LGVTCIHVKDGM 522 (538)
Q Consensus 511 aGi~~i~V~dg~ 522 (538)
+|+. ++|.++.
T Consensus 111 ag~~-~~v~~~~ 121 (154)
T TIGR01670 111 VGLS-VAVADAH 121 (154)
T ss_pred CCCe-EecCCcC
Confidence 9997 8887753
No 146
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.24 E-value=2.5e-11 Score=113.97 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=76.4
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-ee----------------cCCCCHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EI----------------YPGQKTTHF 113 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~----------------~~~~Kp~~f 113 (538)
...+.++||+.++++.|+++|++++|+|++.. ..++..++.+|+..+|... .. .+..|+..+
T Consensus 69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 69 ARQVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVL 147 (177)
T ss_pred HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence 34567889999999999999999999999988 9999999999998766532 00 112356778
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
..+++++|+++++|++|||+.+|+.+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 888899999999999999999999998753
No 147
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.23 E-value=2.8e-11 Score=115.76 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=86.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------cCCchHHHHHH
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------PGQKTTHFANL 484 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------~~~k~~~~~ka 484 (538)
.++.++||+.++|++|+++|++++|+|++... .++.+++++|+..+|...... +.+|++.+.++
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMC-LAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 45789999999999999999999999999754 889999999998888632111 12344678888
Q ss_pred HHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 485 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 485 l~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++++|++|++|+||||+.+|+++|+++|+.++..+++.
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 89999999999999999999999999999998877653
No 148
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.23 E-value=2.5e-11 Score=116.74 Aligned_cols=98 Identities=22% Similarity=0.281 Sum_probs=78.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc--cee--ec--CCchHHHHHHHHHhCCCCCc
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH--KEI--FP--GQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~--~~i--~~--~~k~~~~~kal~~lgi~pee 494 (538)
.+.++||+.++|++|+++ +++.++|+++.. .....++.+++..||+. ..+ .. ..|++.|+.+++++| |++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~-~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~ 147 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTALGDS-IDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRV 147 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCCccc-hhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCc
Confidence 467999999999999997 467777776533 44446788888876641 112 11 257888999999999 899
Q ss_pred EEEEecccccHHhHccc--CCEEEEECCCC
Q psy8912 495 MVFFDDEERNSHDVSPL--GVTCIHVKDGM 522 (538)
Q Consensus 495 ~l~~eDs~~~I~aAk~a--Gi~~i~V~dg~ 522 (538)
|+||||+..|+++|++| |+++|+|.||.
T Consensus 148 ~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 148 VCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred EEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 99999999999999999 99999999985
No 149
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.22 E-value=2.9e-11 Score=111.37 Aligned_cols=89 Identities=16% Similarity=0.137 Sum_probs=76.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee----ecCCchHHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI----FPGQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i----~~~~k~~~~~kal~~lgi~pee~l 496 (538)
....+||+.++|+.|+++|++++|+|++... .+...++.+ +.+||+.... ...++++.|.++++++|++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~-~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLR-AQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchH-HHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 4567899999999999999999999999865 778888988 8899984322 22346777999999999999 999
Q ss_pred EEecccccHHhHcccC
Q psy8912 497 FFDDEERNSHDVSPLG 512 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aG 512 (538)
+|||+..|+++|+++|
T Consensus 139 ~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 139 HVGDNLNDIEGARNAG 154 (154)
T ss_pred EEeCCHHHHHHHHHcc
Confidence 9999999999999987
No 150
>KOG2914|consensus
Probab=99.22 E-value=3.4e-11 Score=118.99 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=90.9
Q ss_pred chHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC-CccccccceeecC-------CchHHHHH
Q psy8912 412 DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN-WNQHFDHKEIFPG-------QKTTHFAN 483 (538)
Q Consensus 412 ~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg-L~~yFd~~~i~~~-------~k~~~~~k 483 (538)
....+.+.....+.||+..+++.|+.+|+++|+||++++. .++..+++++ +.+.|+....+++ +.|+.|+.
T Consensus 81 ~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~-~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~ 159 (222)
T KOG2914|consen 81 EEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSA-SFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLK 159 (222)
T ss_pred HHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcc-cHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHH
Confidence 3445566667889999999999999999999999999765 5666677766 7777874444222 45777999
Q ss_pred HHHHhCCCC-CcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 484 LKKATGIEY-KDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 484 al~~lgi~p-ee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+++.+|..| +.||+|||+..|+++|++||+.||+|++
T Consensus 160 A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 160 AAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred HHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 999999999 9999999999999999999999999998
No 151
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.22 E-value=3.5e-11 Score=115.95 Aligned_cols=88 Identities=11% Similarity=0.049 Sum_probs=75.4
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec----CCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP----GQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~----~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+.+++.++|+.|+++|++++|+|++++. .++..|+++|+..||+...... .++++.|.++++++|++|++|++|
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRK-DAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHH-HHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 35667799999999999999999998754 8899999999999999432221 245777999999999999999999
Q ss_pred ecccccHHhHccc
Q psy8912 499 DDEERNSHDVSPL 511 (538)
Q Consensus 499 eDs~~~I~aAk~a 511 (538)
||+.+|+++|+++
T Consensus 185 GD~~~Di~aA~~a 197 (197)
T TIGR01548 185 GDTVDDIITGRKA 197 (197)
T ss_pred eCCHHHHHHHHhC
Confidence 9999999999975
No 152
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.21 E-value=5.3e-11 Score=114.55 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=80.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc-eee---------------cCCCCHHHHHHHH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEI---------------YPGQKTTHFESLK 117 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~-ie~---------------~~~~Kp~~f~~al 117 (538)
..++|++.++|+.++++|++++|+|++.. ..++.+++.+|+..+|.. +.. .+..|+..+..++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~-~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLT-ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 46899999999999999999999999998 899999999999888765 211 0112456688889
Q ss_pred HHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 118 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 118 e~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
++.++++++|+++||+.+|+.+++.+|..++
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~ 195 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYV 195 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHHHHhCCCcEE
Confidence 9999999999999999999999999998654
No 153
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.20 E-value=6.7e-11 Score=113.68 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=76.5
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
...++|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+.+ .|.... +++.|.+|..+++++++++++|+||
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGIFDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTSCSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccc-cccccccccccccccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 346789999999999999999999998877 99999999999955 333311 3444578899999999999999999
Q ss_pred eCCcccHHHHhhcC
Q psy8912 131 DDEERNSHDVSPLG 144 (538)
Q Consensus 131 GDs~~DI~aAk~aG 144 (538)
||+.+|+.|+++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999987
No 154
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.19 E-value=5.8e-11 Score=115.83 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=83.6
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc----------e-ee----cCCchHHHH
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------E-IF----PGQKTTHFA 482 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~----------~-i~----~~~k~~~~~ 482 (538)
....+.++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+..+|... . .+ ..+|+..|.
T Consensus 80 ~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 158 (219)
T TIGR00338 80 VRENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLL 158 (219)
T ss_pred HHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHH
Confidence 334578999999999999999999999999875 4889999999999998521 0 01 113788899
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+++++++++|++|+||||+.+|+++|+++|+.++
T Consensus 159 ~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 159 ILLRKEGISPENTVAVGDGANDLSMIKAAGLGIA 192 (219)
T ss_pred HHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEE
Confidence 9999999999999999999999999999999864
No 155
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.19 E-value=5.5e-11 Score=118.68 Aligned_cols=107 Identities=12% Similarity=-0.037 Sum_probs=87.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHH--HHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK--QILNL 92 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~--~~L~~ 92 (538)
.+++++||+|||||. ...++||+.++|++|+++|++++++||+++ .... ..++.
T Consensus 7 ~~~~~~~D~dG~l~~-----------------------~~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID-----------------------GNHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHHHH
Confidence 389999999999997 567899999999999999999999999987 5555 78899
Q ss_pred cCCCC-CCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 93 INLNQ-YFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 93 lgL~~-~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
+|+.. +|+.+..........+..++++++++|.+|++|||+..|++....+|.
T Consensus 63 ~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 63 LGINADLPEMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred CCCCccccceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 99987 888742211112356777788899999999999999988877755443
No 156
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.18 E-value=1.2e-10 Score=114.02 Aligned_cols=93 Identities=10% Similarity=0.050 Sum_probs=72.7
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcc--eee------cCCCCHHHH----------
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN--KEI------YPGQKTTHF---------- 113 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~--ie~------~~~~Kp~~f---------- 113 (538)
....++||+.++|+.|+++|++++|+|++.. ..++.+++.++...++.. ... ...+.|..+
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 3578999999999999999999999999988 899999988754444421 100 111223333
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
..++++++..+++|+||||+.+|+.+|+.+|+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 46777788889999999999999999999998
No 157
>KOG4549|consensus
Probab=99.17 E-value=2.8e-11 Score=107.71 Aligned_cols=89 Identities=33% Similarity=0.371 Sum_probs=80.4
Q ss_pred ccccccccccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-----chhhhhhhhcccC
Q psy8912 307 AKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-----EKKIKHFANLKKD 378 (538)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~ 378 (538)
++|+++..|+++++|+-.||+.||.|++||||+++++|.++|+++...++|+.+ |-|+. ..|.-||..++..
T Consensus 38 ~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~ 117 (144)
T KOG4549|consen 38 SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNN 117 (144)
T ss_pred cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhc
Confidence 899999999999999999999999999999999999999999999999999864 44443 2399999999999
Q ss_pred cCCCccceEEeecCCCC
Q psy8912 379 SKIKYKDMVFFDDEERN 395 (538)
Q Consensus 379 ~~~~~~~l~~~Dldh~~ 395 (538)
|...++..++||..-+|
T Consensus 118 s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 118 SNSIEKNKQVFDDESRN 134 (144)
T ss_pred cCcchhceeeecccccC
Confidence 99999999999976444
No 158
>KOG2882|consensus
Probab=99.17 E-value=1.2e-10 Score=117.97 Aligned_cols=64 Identities=11% Similarity=-0.085 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEEEECCCCCchHhHHhhC---CCCCCEEEeC
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHSWLMMSSGRLKEATG---IDYKDMIYFD 174 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI~V~~G~~~~~~~~~l~---~~~~d~Ii~d 174 (538)
.++..++++++++|++|+||||+.. ||.-|+++|+++++|.+|..+.+..+... ...||+++..
T Consensus 228 ~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~ 295 (306)
T KOG2882|consen 228 FMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADS 295 (306)
T ss_pred HHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhh
Confidence 5689999999999999999999975 99999999999999999998877766542 2235554443
No 159
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.16 E-value=2.3e-10 Score=112.63 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=82.7
Q ss_pred cCC-CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---ee--cC----------CCCHHHHH
Q psy8912 51 GTL-IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---EI--YP----------GQKTTHFE 114 (538)
Q Consensus 51 ~~~-~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---e~--~~----------~~Kp~~f~ 114 (538)
... ..++||+.++++.++++|++++|+|++.. ..++.+.+.+|++..+... +. +. ..|-....
T Consensus 72 ~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~ 150 (212)
T COG0560 72 REEFLRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALR 150 (212)
T ss_pred HHhcCcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHH
Confidence 444 88999999999999999999999999998 9999999999998766543 10 11 12557788
Q ss_pred HHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 115 SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 115 ~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
..++++|+++++++++||+.+|+.+-+.+|...+
T Consensus 151 ~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia 184 (212)
T COG0560 151 ELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184 (212)
T ss_pred HHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence 9999999999999999999999999999999743
No 160
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.16 E-value=2.3e-10 Score=109.48 Aligned_cols=126 Identities=16% Similarity=0.076 Sum_probs=94.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
.+++++|.||||....-. ++ .......+.||+.+.+..|++.|++++++||.+-.
T Consensus 5 ~k~lflDRDGtin~d~~~-yv------------~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~ 71 (181)
T COG0241 5 QKALFLDRDGTINIDKGD-YV------------DSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDK 71 (181)
T ss_pred CcEEEEcCCCceecCCCc-cc------------CcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHH
Confidence 589999999999432110 10 01235789999999999999999999999995321
Q ss_pred --HHHHHHHHHcCCCCCCcce-------e---ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 84 --LHAKQILNLINLNQYFSNK-------E---IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 84 --~~~~~~L~~lgL~~~Fd~i-------e---~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
......|+..|. .|+.+ + ...+++|.+++.+++++++++++.++|||+..|+++|.++|+..+.+.
T Consensus 72 ~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~ 149 (181)
T COG0241 72 LHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVL 149 (181)
T ss_pred HHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEE
Confidence 344555666663 34433 1 122345689999999999999999999999999999999999988887
Q ss_pred CCCCc
Q psy8912 152 LMMSS 156 (538)
Q Consensus 152 ~G~~~ 156 (538)
.|...
T Consensus 150 ~~~~~ 154 (181)
T COG0241 150 TGIGV 154 (181)
T ss_pred cCccc
Confidence 76543
No 161
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.16 E-value=1.3e-10 Score=113.52 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=85.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-----CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++|++.++|++|+++ ++++++|+...+ .....|+++||.+|||.+.+... +.++.|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~-~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARP-HQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChH-HHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 588999999999999999 999999986654 78889999999999995444332 34666999999999999999
Q ss_pred EEEecccccH-HhHcccCCEEEEECCC
Q psy8912 496 VFFDDEERNS-HDVSPLGVTCIHVKDG 521 (538)
Q Consensus 496 l~~eDs~~~I-~aAk~aGi~~i~V~dg 521 (538)
++|||+..+. .+|+++|+++|.+..+
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCC
Confidence 9999998776 9999999999987764
No 162
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.15 E-value=2.4e-10 Score=111.78 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=85.2
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-ee-----------cCCCCHHHHHHHHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EI-----------YPGQKTTHFESLKK 118 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~-----------~~~~Kp~~f~~ale 118 (538)
...+.++||+.++|+.|+++| +++|+|++.. ..++.+++.+|+..+|... +. ..+..+......++
T Consensus 64 ~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~-~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 64 IATLKPLEGAVEFVDWLRERF-QVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 141 (203)
T ss_pred HHhCCCCccHHHHHHHHHhCC-eEEEEeCChH-HHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH
Confidence 345689999999999999985 9999999998 9999999999999888632 11 11112233444445
Q ss_pred HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 119 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 119 ~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
+.+. +|++|||+.+|+.+++.+|...+.... .. +....||+-+..+..+++..+.+
T Consensus 142 ~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak----~~----~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 142 SLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP----EN----VIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred hhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC----HH----HHHhCCCCCcccCHHHHHHHHHH
Confidence 5553 899999999999999999998654421 11 22334555555555565554443
No 163
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.14 E-value=1.1e-10 Score=110.95 Aligned_cols=80 Identities=11% Similarity=0.150 Sum_probs=72.7
Q ss_pred HHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 432 LKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 432 L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
+..|+++|++++|+|+++.+ .++..|+++|+.+||+.. .+|++.+..+++++|++|++|++|||+.+|+.+++.+
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~-~~~~~l~~lgi~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~a 117 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSG-AVRHRAEELKIKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRV 117 (169)
T ss_pred HHHHHHCCCEEEEEECCCcH-HHHHHHHHCCCcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHC
Confidence 67788999999999999765 889999999999999832 5788999999999999999999999999999999999
Q ss_pred CCEEE
Q psy8912 512 GVTCI 516 (538)
Q Consensus 512 Gi~~i 516 (538)
|+.++
T Consensus 118 g~~~a 122 (169)
T TIGR02726 118 GLAVA 122 (169)
T ss_pred CCeEE
Confidence 98765
No 164
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.12 E-value=1.1e-10 Score=121.62 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=85.1
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-c-------------ee-ecCCch
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-K-------------EI-FPGQKT 478 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~-------------~i-~~~~k~ 478 (538)
+.+.....+.++||+.++|++|+++|++++|+|++... .++.+++++|+...|.. . .+ ....|+
T Consensus 172 il~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~-~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~ 250 (322)
T PRK11133 172 ILQQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTY-FADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKA 250 (322)
T ss_pred HHHHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcch-hHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHH
Confidence 34444556889999999999999999999999998764 78888999999765430 0 01 122688
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEE
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
+.+.++++++|++|++|++|||+.+|+..+++||+.++.
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 889999999999999999999999999999999997764
No 165
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.07 E-value=2.6e-10 Score=109.49 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=74.6
Q ss_pred HHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcc
Q psy8912 431 ILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP 510 (538)
Q Consensus 431 ~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~ 510 (538)
.++.|+++|++++|+|+.+.. .+..+++.+|+..||+ ...+|+..+.++++++|++|++|+||||+.+|+.++++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~-~v~~~l~~lgl~~~f~----g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSK-LVEDRMTTLGITHLYQ----GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcH-HHHHHHHHcCCceeec----CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 678888999999999998754 8899999999999997 33468899999999999999999999999999999999
Q ss_pred cCCEEEEECC
Q psy8912 511 LGVTCIHVKD 520 (538)
Q Consensus 511 aGi~~i~V~d 520 (538)
+|+.+ +|.+
T Consensus 131 aG~~~-~v~~ 139 (183)
T PRK09484 131 VGLSV-AVAD 139 (183)
T ss_pred CCCeE-ecCC
Confidence 99995 4643
No 166
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.07 E-value=4.5e-10 Score=112.02 Aligned_cols=45 Identities=7% Similarity=0.003 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHcCCCCCcE-EEEeCCc-ccHHHHhhcCCeEEEECCC
Q psy8912 109 KTTHFESLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~-L~IGDs~-~DI~aAk~aG~~tI~V~~G 153 (538)
+|.+|..++++++++++++ +||||+. .||.+|+++|+.+++|.+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 190 SPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred CHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 4577999999999999887 9999998 7999999999999999875
No 167
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.07 E-value=4.6e-10 Score=106.43 Aligned_cols=115 Identities=18% Similarity=0.085 Sum_probs=92.0
Q ss_pred CCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCc--eEEEEcCCC------cHHH
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKC--LVAAASRTS------EILH 85 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~Gi--kiaIvTn~~------~p~~ 85 (538)
.-+|+|+||.|+||.+ .....+.|...+.+++|++.+. +++|+||+. ....
T Consensus 39 ~Gik~li~DkDNTL~~---------------------~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~ 97 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTP---------------------PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGER 97 (168)
T ss_pred cCceEEEEcCCCCCCC---------------------CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHH
Confidence 3589999999999954 2356788889999999999865 599999983 2266
Q ss_pred HHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCC-----CCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCC
Q psy8912 86 AKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGI-----EYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi-----~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~ 154 (538)
++.+-+.+|+. .|- ...+||..+.++++.++. .|+++++|||.. .||.+|..+|+.+|+|..|.
T Consensus 98 a~~~~~~lgIp-vl~----h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 98 AEALEKALGIP-VLR----HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHHHHHhhCCc-EEE----eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 77777888853 222 245788878888887765 499999999996 69999999999999998875
No 168
>PLN02645 phosphoglycolate phosphatase
Probab=99.04 E-value=5e-10 Score=116.17 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=134.8
Q ss_pred ccccccccccc---cccchHHHHHHhhhcCcceeeecccc-c--cchhhhHHhhhCCCcccccccccCcchhhhhhhhcc
Q psy8912 303 RVEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTV-H--IRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLK 376 (538)
Q Consensus 303 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (538)
-+-|-.|+|.+ +||.+.+.++.|+++|+++.++|=.+ . .+++. -|.++|+. +...||+.+..-+.++-+..
T Consensus 31 ~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~-~l~~lGi~--~~~~~I~ts~~~~~~~l~~~ 107 (311)
T PLN02645 31 FIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGK-KFESLGLN--VTEEEIFSSSFAAAAYLKSI 107 (311)
T ss_pred EEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHH-HHHHCCCC--CChhhEeehHHHHHHHHHhh
Confidence 36688999986 89999999999999999999998544 2 23333 45789986 56789999965666665543
Q ss_pred cCcCCCccceEEeecC-------CCCcCCCCCCcccc--ccccc----------chHhhhcCCCCccCCCHHHHHHHHHH
Q psy8912 377 KDSKIKYKDMVFFDDE-------ERNARSISKLGVIG--IQVHR----------DKVLDAGGAIIKYYRDVPAILKYLKQ 437 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~--i~~~~----------~~i~d~~~~~v~l~pGv~e~L~~Lk~ 437 (538)
.-++- ..+.+++-+ +..+..+..+.-.. ..... ..|.=.+.. ---|.........|++
T Consensus 108 ~~~~~--~~V~viG~~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvvg~d~-~~~~~~l~~a~~~l~~ 184 (311)
T PLN02645 108 NFPKD--KKVYVIGEEGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDR-YINYYKIQYATLCIRE 184 (311)
T ss_pred ccCCC--CEEEEEcCHHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEEecCC-CCCHHHHHHHHHHHhc
Confidence 22211 247777654 22221111000000 00000 000000000 0012223334455554
Q ss_pred CCceEEEEeCCCchHHHHHHHhhcCCccccccceeec--------CCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhH
Q psy8912 438 NNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP--------GQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDV 508 (538)
Q Consensus 438 ~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~--------~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aA 508 (538)
++=.+.|+|+.+..-.....+..+|+..||+...... .+++..|..++++++++|++|+||||+. .||.+|
T Consensus 185 ~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 185 NPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 3235889998775311233456678888888332211 2345569999999999999999999997 999999
Q ss_pred cccCCEEEEECCCCCHH
Q psy8912 509 SPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 509 k~aGi~~i~V~dg~t~~ 525 (538)
+++|+++++|.+|.+..
T Consensus 265 ~~aG~~~ilV~~G~~~~ 281 (311)
T PLN02645 265 QNGGCKTLLVLSGVTSE 281 (311)
T ss_pred HHcCCCEEEEcCCCCCH
Confidence 99999999999997653
No 169
>PLN02954 phosphoserine phosphatase
Probab=99.04 E-value=1e-09 Score=107.45 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=80.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc--cccccce-----------------eecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN--QHFDHKE-----------------IFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~--~yFd~~~-----------------i~~~~k~~~~~ 482 (538)
..++||+.++|++|+++|++++|+|++... .++.+|+.+|+. ++|.... ....+|++.++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~-~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQ-MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHH-HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 568999999999999999999999999865 889999999997 4664100 01225788889
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
++++++|. ++|+||||+.+|+++|+++|+.++...++.
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~ 199 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGV 199 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCC
Confidence 99888875 689999999999999999999887665543
No 170
>KOG4549|consensus
Probab=99.04 E-value=8.5e-10 Score=98.37 Aligned_cols=113 Identities=25% Similarity=0.323 Sum_probs=98.3
Q ss_pred CccceEEeecC----------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 382 KYKDMVFFDDE----------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 382 ~~~~l~~~Dld----------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
+||+.++|||| |.+. ||+ | +... -.++|++...|++++.+|..|+++|+.|++||++..+
T Consensus 3 ~~p~~~~fdldytiwP~~vdthl~~----pfk-P---~k~~--~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap 72 (144)
T KOG4549|consen 3 EKPEAMQFDLDYTIWPRLVDTHLDY----PFK-P---FKCE--CGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAP 72 (144)
T ss_pred CCCceeEEeccceeeeEEEEecccc----ccc-c---cccC--cccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCH
Confidence 48999999999 8887 555 1 1111 1279999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCc---------cccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccccc
Q psy8912 452 LRAHQLVDLFNWN---------QHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERN 504 (538)
Q Consensus 452 ~~a~~~L~~lgL~---------~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~ 504 (538)
+.|.+.|+.+.+. ..|.+...+++.|-.||...-...++...+..+|+|..++
T Consensus 73 ~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 73 QIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred HHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccccC
Confidence 9999999999975 3566777888999999999999999999999999999988
No 171
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.03 E-value=8e-10 Score=121.81 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=89.2
Q ss_pred CCceEEEeCCCCCChhh-HhhhhchhHHHHHHHHhhhcCCCc-cCCCHHHHHHHhhhCCceEEEEcCCCcH---------
Q psy8912 15 FPKMVVFDLDYTLWPLH-VHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI--------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~-~~~~i~~~~~~~~~i~~~~~~~~~-l~pgv~elL~~Lk~~GikiaIvTn~~~p--------- 83 (538)
..|+++||+||||+.+- ...+. ......+ ++||+.+.|+.|++.|++++|+||.+..
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~------------~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFP------------KGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred cCcEEEEECCCCccccCCCccCC------------CCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 46899999999997521 00010 0011233 6899999999999999999999997662
Q ss_pred --HHHHHHHHHcCCCCCCcceee-----cCCCCHHHHHHHHHHcC----CCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 84 --LHAKQILNLINLNQYFSNKEI-----YPGQKTTHFESLKKATG----IEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 84 --~~~~~~L~~lgL~~~Fd~ie~-----~~~~Kp~~f~~ale~lg----i~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+..+++.+|+. |+.+.. ..+++|.++..++++++ +++++++||||+..|+.+|+++|..
T Consensus 235 ~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 235 FKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred HHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 2477889999975 665411 22345699999999985 8999999999999999999888764
No 172
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.00 E-value=1.1e-09 Score=89.88 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=63.1
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 105 YPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 105 ~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
.+++.|.+|..++++++++|++|+||||+ ..||.+|+++|+.+|+|.+|....+.... ....||+|+.+..+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~-~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK-AEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH-SSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc-cCCCCCEEECCHHh
Confidence 35677899999999999999999999999 89999999999999999999988777665 34689999887543
No 173
>PTZ00445 p36-lilke protein; Provisional
Probab=99.00 E-value=9.7e-10 Score=107.00 Aligned_cols=132 Identities=12% Similarity=0.130 Sum_probs=89.2
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH-----------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI----------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p----------- 83 (538)
-||+|++|+|.||...+-..+..|. ..... -...+-|....+++.|++.|++++|||=++..
T Consensus 42 GIk~Va~D~DnTlI~~HsgG~~~~~-~~~~~------~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~I 114 (219)
T PTZ00445 42 GIKVIASDFDLTMITKHSGGYIDPD-NDDIR------VLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYI 114 (219)
T ss_pred CCeEEEecchhhhhhhhcccccCCC-cchhh------hhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCccee
Confidence 5899999999999441111010000 00000 01235677889999999999999999976551
Q ss_pred ---HHHHHHHHHcCCC----CCC---cce---------eecCCCCHHH--H--HHHHHHcCCCCCcEEEEeCCcccHHHH
Q psy8912 84 ---LHAKQILNLINLN----QYF---SNK---------EIYPGQKTTH--F--ESLKKATGIEYKDMVFFDDEERNSHDV 140 (538)
Q Consensus 84 ---~~~~~~L~~lgL~----~~F---d~i---------e~~~~~Kp~~--f--~~ale~lgi~P~e~L~IGDs~~DI~aA 140 (538)
+.++..|+.-+.. ..| ... ...-++.|.+ | +.+++++|+.|++|+||+|+..++++|
T Consensus 115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA 194 (219)
T PTZ00445 115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA 194 (219)
T ss_pred chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH
Confidence 2566677755432 111 110 0111233455 7 999999999999999999999999999
Q ss_pred hhcCCeEEEECCC
Q psy8912 141 SPLGVTCIHSWLM 153 (538)
Q Consensus 141 k~aG~~tI~V~~G 153 (538)
+++|++++++..+
T Consensus 195 ~~lGi~ai~f~~~ 207 (219)
T PTZ00445 195 LKEGYIALHVTGN 207 (219)
T ss_pred HHCCCEEEEcCCh
Confidence 9999999999753
No 174
>KOG3085|consensus
Probab=98.99 E-value=1.4e-09 Score=108.23 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=86.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec-----CCchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP-----GQKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~-----~~k~~~~~kal~~lgi~pee~ 495 (538)
...+.+++.++|++|+++|+.+++.|+.+ ++.+.+|..+|+..|||...... .+.++.|+.+++++|+.|+||
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d--~r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFD--DRLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCc--HHHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 45577888899999999999999999775 46789999999999999432211 144666999999999999999
Q ss_pred EEEeccccc-HHhHcccCCEEEEECCCCCHH
Q psy8912 496 VFFDDEERN-SHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 496 l~~eDs~~~-I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+++||...+ +++|+++|++.+.|-+..+.-
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~ 219 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILVDNSITAL 219 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEEccccchh
Confidence 999999766 999999999999998876554
No 175
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.95 E-value=5.7e-10 Score=104.94 Aligned_cols=83 Identities=12% Similarity=0.098 Sum_probs=70.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---cC--CchHHHHHHHHHhCCCCCcE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---PG--QKTTHFANLKKATGIEYKDM 495 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---~~--~k~~~~~kal~~lgi~pee~ 495 (538)
.+.++||+.++|+ +++|+|+++.. ..+..|+++||.+||+.+... .. +.++.|+++++++|++|++|
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~-~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHW-AFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHH-HHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 5789999999998 48999998754 778899999999999943221 11 34666999999999999999
Q ss_pred EEEecccccHHhHccc
Q psy8912 496 VFFDDEERNSHDVSPL 511 (538)
Q Consensus 496 l~~eDs~~~I~aAk~a 511 (538)
++|||+.+|+++|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999874
No 176
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.95 E-value=1.7e-09 Score=106.32 Aligned_cols=102 Identities=9% Similarity=0.039 Sum_probs=77.5
Q ss_pred hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccccceeecC-----Cch--H----
Q psy8912 413 KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKEIFPG-----QKT--T---- 479 (538)
Q Consensus 413 ~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd~~~i~~~-----~k~--~---- 479 (538)
.+.+.+...+.++||+.++|++|+++|++++|+|++... .++.+|+++ +.. +|......++ .++ .
T Consensus 64 ~~~~~~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~-~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~ 141 (219)
T PRK09552 64 EIIQFLLETAEIREGFHEFVQFVKENNIPFYVVSGGMDF-FVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHC 141 (219)
T ss_pred HHHHHHHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHH-HHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccc
Confidence 344555566899999999999999999999999999864 889999998 644 3210011111 111 1
Q ss_pred ------HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 480 ------HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 480 ------~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
....++++++.++++|+||||+.+|+.+|++||+.++
T Consensus 142 ~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 142 QNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred cccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 1357888999999999999999999999999999443
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.92 E-value=1.2e-09 Score=103.17 Aligned_cols=104 Identities=7% Similarity=0.014 Sum_probs=83.6
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc-ccccceeecC---CchHHHHHHHHHhCCCC
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ-HFDHKEIFPG---QKTTHFANLKKATGIEY 492 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~-yFd~~~i~~~---~k~~~~~kal~~lgi~p 492 (538)
.+...+...||+.|+|++|.+. +.++|.|++.+ ..|+++|+.++... +|+....... .++ .|.+.+..+|.++
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~-~~~K~L~~l~~~~ 112 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDILDRGGKVISRRLYRESCVFTNG-KYVKDLSLVGKDL 112 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHHHCcCCCEEeEEEEccccEEeCC-CEEeEchhcCCCh
Confidence 3444578999999999999988 99999999975 59999999999876 8873211111 122 2788899999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
++||+|||+..++.++.++|+.+.......+
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~ 143 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWFGDPN 143 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCCCCCC
Confidence 9999999999999999999999877764433
No 178
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.89 E-value=6.8e-09 Score=98.21 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=77.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH---cCCCCCCcce---eecCCCCHHHHHHHHHHcCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL---INLNQYFSNK---EIYPGQKTTHFESLKKATGIEY 124 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~---lgL~~~Fd~i---e~~~~~Kp~~f~~ale~lgi~P 124 (538)
.-..++||++.+.|++-+++|++++|.|+++- ....-.... .++..+|+.. .+.++....-|.+++...|++|
T Consensus 99 elkahlypDav~~ik~wk~~g~~vyiYSSGSV-~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 99 ELKAHLYPDAVQAIKRWKALGMRVYIYSSGSV-KAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccccCHhHHHHHHHHHHcCCcEEEEcCCCc-hhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCc
Confidence 44568999999999999999999999999976 333222221 1333444433 2333344578999999999999
Q ss_pred CcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 125 KDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 125 ~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
.+++|+.|.+..+.||+.+||.++++.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeee
Confidence 999999999999999999999988775
No 179
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.88 E-value=5.3e-09 Score=98.81 Aligned_cols=91 Identities=9% Similarity=0.081 Sum_probs=73.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee---------------------cC----
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF---------------------PG---- 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~---------------------~~---- 475 (538)
.+.++||+.++|++|+++|++++|+|++... .++.+++++|+.++|+.+... +.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDF-FIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHH-HHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 3789999999999999999999999998754 788899999999999832210 10
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.|+..+..+.++. |++|+||||+.+|+++|+++++.+
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 2555555555443 899999999999999999997654
No 180
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.85 E-value=6.8e-09 Score=100.09 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=76.5
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceee-------cC--CchHHHHHHHHHhCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIF-------PG--QKTTHFANLKKATGI 490 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~-------~~--~k~~~~~kal~~lgi 490 (538)
..+.++||+.++|++|+++ ++++|+|++... .++.+|+++|+..||...... .. .++.....++++++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYE-FAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHH-HHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 3577999999999999999 999999999764 889999999999998632111 11 233445666777778
Q ss_pred CCCcEEEEecccccHHhHcccCCEEE
Q psy8912 491 EYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 491 ~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.+++|++|||+.+|+.+++++|+.+.
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 88999999999999999999998654
No 181
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.85 E-value=3.9e-08 Score=98.82 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
|+..++.+++++|+++++|++|||+.+|+.+++.+|+ ++.+.+ .... .+ ..+++|+.+ ..+.....+.
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~vamgn--a~~~-lk----~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GVAMGN--ADDA-VK----ARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eEEecC--chHH-HH----HhCCEEEecCCCCcHHHHHH
Confidence 5566888999999999999999999999999999997 344433 3332 22 246887755 4444444443
No 182
>PTZ00445 p36-lilke protein; Provisional
Probab=98.84 E-value=7.7e-09 Score=100.80 Aligned_cols=153 Identities=14% Similarity=0.129 Sum_probs=101.6
Q ss_pred ccccccCcchhhhh-----hhhcccCcCCCccceEEeecCCCCcCCC-CCCcccccccccchHhhhcCCCCccCCCHHHH
Q psy8912 358 DYKEIFPAEKKIKH-----FANLKKDSKIKYKDMVFFDDEERNARSI-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAI 431 (538)
Q Consensus 358 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Dldh~~~s~~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~ 431 (538)
-++|.|-.+||..| |+..-+..+++ ++++|+|.==+.-- --|-.+ .+.. .... -.+-|....+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~v~~L~~~GIk---~Va~D~DnTlI~~HsgG~~~~-----~~~~-~~~~--~~~tpefk~~ 83 (219)
T PTZ00445 15 EYIESGLFDHLNPHESADKFVDLLNECGIK---VIASDFDLTMITKHSGGYIDP-----DNDD-IRVL--TSVTPDFKIL 83 (219)
T ss_pred HHHHhcccccCCHHHHHHHHHHHHHHcCCe---EEEecchhhhhhhhcccccCC-----Ccch-hhhh--ccCCHHHHHH
Confidence 35666555566554 77776777775 79999991111000 012211 0000 0111 2356889999
Q ss_pred HHHHHHCCceEEEEeCCCchH--------------HHHHHHhhcCCc----ccccc-ce------eecC-----Cch---
Q psy8912 432 LKYLKQNNCLVAAASRTTEML--------------RAHQLVDLFNWN----QHFDH-KE------IFPG-----QKT--- 478 (538)
Q Consensus 432 L~~Lk~~GiklaIASss~~~~--------------~a~~~L~~lgL~----~yFd~-~~------i~~~-----~k~--- 478 (538)
++.|++.|++++|+|=|+... .++.+|+.-+.. ..|.+ .- -+.. +.+
T Consensus 84 ~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK 163 (219)
T PTZ00445 84 GKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDK 163 (219)
T ss_pred HHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccch
Confidence 999999999999999988644 678889865543 33321 00 0000 112
Q ss_pred -HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 479 -THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 479 -~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
-|+++++++.|++|+||+||||+..+|++|++.|++++.++++
T Consensus 164 ~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 164 SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 3349999999999999999999999999999999999999864
No 183
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.83 E-value=4.3e-08 Score=96.23 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
|+..+..+++.+|++++++++|||+.+|+.+++.+|.. +.+.++. . ..+. .+++|..+ ..+.....+.
T Consensus 158 Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~--~-~vk~----~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 158 KGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG-VAVANAD--E-ELKE----AADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce-EEecCcc--H-HHHH----hcceEecCCCcChHHHHHH
Confidence 45568888999999999999999999999999999985 4565433 2 2222 35677654 3444444443
No 184
>PRK08238 hypothetical protein; Validated
Probab=98.83 E-value=2.6e-08 Score=109.16 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=76.3
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee---ecCCCCHH-HHHHHHHHcCCCCCcEE
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---IYPGQKTT-HFESLKKATGIEYKDMV 128 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie---~~~~~Kp~-~f~~ale~lgi~P~e~L 128 (538)
..+++||+.+++++++++|++++++|++++ ..++.+++.+|+ |+.+. .....||+ -...+.+.++ .++++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~-~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~ 143 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDE-RLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFD 143 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCee
Confidence 345679999999999999999999999988 999999999987 66551 12222221 1223335554 36689
Q ss_pred EEeCCcccHHHHhhcCCeEEEECCCCCchHhHH
Q psy8912 129 FFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKE 161 (538)
Q Consensus 129 ~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~ 161 (538)
++||+.+|+.+++.+| +++.|+.+.......+
T Consensus 144 yvGDS~~Dlp~~~~A~-~av~Vn~~~~l~~~a~ 175 (479)
T PRK08238 144 YAGNSAADLPVWAAAR-RAIVVGASPGVARAAR 175 (479)
T ss_pred EecCCHHHHHHHHhCC-CeEEECCCHHHHHHHH
Confidence 9999999999999999 7888987665444433
No 185
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.81 E-value=9.5e-09 Score=98.87 Aligned_cols=98 Identities=15% Similarity=0.184 Sum_probs=82.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-cee-e--------------cCCchHHHHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEI-F--------------PGQKTTHFANLK 485 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i-~--------------~~~k~~~~~kal 485 (538)
..++||+.++|++++++|++++|+|++..+ .++.+++++|+.++|.. ... . ...|+..+..++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~-~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTI-LVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 458999999999999999999999999865 88999999999998863 111 0 113556688888
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.++++++|++++|+..|+..++.+|..++..++
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 88999999999999999999999999998876665
No 186
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.80 E-value=6.1e-09 Score=96.51 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=91.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhc---CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKG---TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~---~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
++|.++||+||||.+-.+. +++.. ..+.+.+|. -++.|.+.|++++|+|+... ..++...+
T Consensus 7 ~IkLli~DVDGvLTDG~ly-------------~~~~Gee~KaFnv~DG~--Gik~l~~~Gi~vAIITGr~s-~ive~Ra~ 70 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLY-------------YDENGEEIKAFNVRDGH--GIKLLLKSGIKVAIITGRDS-PIVEKRAK 70 (170)
T ss_pred hceEEEEeccceeecCeEE-------------EcCCCceeeeeeccCcH--HHHHHHHcCCeEEEEeCCCC-HHHHHHHH
Confidence 4999999999999552110 01111 123344553 37888899999999999999 99999999
Q ss_pred HcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 92 LINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 92 ~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
.+|+..+|..+ ..|-..|.++++++++.|++|.||||..+|+..-.+.|..++
T Consensus 71 ~LGI~~~~qG~----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 71 DLGIKHLYQGI----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred HcCCceeeech----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 99998888763 456789999999999999999999999999999999999743
No 187
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.79 E-value=3e-08 Score=92.96 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=80.7
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCc--hHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQK--TTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k--~~~~~kal~~lgi~pee~l~~eDs 501 (538)
.-|.+++-+.++++.|+++-|+|+++ +..+..+++.+|+. .++...| +..|.+|+++++++|++|++|||+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~-e~RV~~~~~~l~v~------fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNK-ESRVARAAEKLGVP------FIYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCC-HHHHHhhhhhcCCc------eeecccCccHHHHHHHHHHcCCChhHEEEEcch
Confidence 44788899999999999999999876 55888889988874 3455555 455999999999999999999999
Q ss_pred c-ccHHhHcccCCEEEEECCCCCHHHHHHHH
Q psy8912 502 E-RNSHDVSPLGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 502 ~-~~I~aAk~aGi~~i~V~dg~t~~~~~~~l 531 (538)
. .|+.++.++|++||.|..=...+.|..-+
T Consensus 120 L~TDVlggnr~G~~tIlV~Pl~~~d~~~t~~ 150 (175)
T COG2179 120 LFTDVLGGNRAGMRTILVEPLVAPDGWITKI 150 (175)
T ss_pred hhhhhhcccccCcEEEEEEEeccccchhhhh
Confidence 5 68999999999999996633333343333
No 188
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.79 E-value=2.6e-08 Score=101.33 Aligned_cols=122 Identities=19% Similarity=0.166 Sum_probs=86.0
Q ss_pred CCceEEEeCCCCCChhh-H-hh-hh--chhH-HHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 15 FPKMVVFDLDYTLWPLH-V-HD-LV--APFK-KIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~-~-~~-~i--~~~~-~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
.+.+||||+|+|+.+.. . .. .. .++. ..+.+... .....++||+.++|+.|+++|++++++||++.. ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~--~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQ--AAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHH--cCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 46899999999995433 1 11 11 3442 23444433 346679999999999999999999999998741 344
Q ss_pred HHHHHHcCCCCCC-cce--eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 87 KQILNLINLNQYF-SNK--EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 87 ~~~L~~lgL~~~F-d~i--e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
...|+.+|+...+ +.+ .....+|+..+..+.+.+++ +++|||+..|+..+..
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhhc
Confidence 5788889987644 433 11234577888888887777 9999999999865433
No 189
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.78 E-value=1.5e-08 Score=97.23 Aligned_cols=88 Identities=13% Similarity=0.133 Sum_probs=74.6
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
..++||+.++|++|+++|++++++|+-+ +..+..+.+.+||.+ +|.. ....+.++.|.+++++|+++|++|+|||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~--~~~kP~~k~~~~~i~~l~~~~~~v~~vG 202 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDN-ESTASAIAKQLGIFDSIVFAR--VIGKPEPKIFLRIIKELQVKPGEVAMVG 202 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSE-HHHHHHHHHHTTSCSEEEEES--HETTTHHHHHHHHHHHHTCTGGGEEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccc-ccccccccccccccccccccc--ccccccchhHHHHHHHHhcCCCEEEEEc
Confidence 4689999999999999999999999665 568999999999966 4442 1123344567999999999999999999
Q ss_pred cccccHHhHcccC
Q psy8912 500 DEERNSHDVSPLG 512 (538)
Q Consensus 500 Ds~~~I~aAk~aG 512 (538)
|+.+|+.++++||
T Consensus 203 Dg~nD~~al~~Ag 215 (215)
T PF00702_consen 203 DGVNDAPALKAAG 215 (215)
T ss_dssp SSGGHHHHHHHSS
T ss_pred cCHHHHHHHHhCc
Confidence 9999999999987
No 190
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.77 E-value=1.7e-09 Score=102.13 Aligned_cols=131 Identities=13% Similarity=0.042 Sum_probs=93.7
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHH-HHH-H--hhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIG-QKV-M--DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~-~~i-~--~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
+++++|+|+||.......... .... -.+ . ......+...||+.++|+.|.+. +.++|.|+++. .+++.+++.
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ 77 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKV--DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDI 77 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCC--CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHH
Confidence 579999999995432111000 0000 000 0 01233456779999999999988 99999999998 999999999
Q ss_pred cCCCC-CCcceee---cCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 93 INLNQ-YFSNKEI---YPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 93 lgL~~-~Fd~ie~---~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
++... +|+.+-. ....++. |.+.++.+|.++++|++|||++.++.++.++|+.+.....
T Consensus 78 ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 78 LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCC
Confidence 99765 7776511 1111233 7788888999999999999999999999999998766653
No 191
>KOG3040|consensus
Probab=98.75 E-value=5.7e-08 Score=93.90 Aligned_cols=120 Identities=19% Similarity=0.182 Sum_probs=91.1
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~l 93 (538)
++.|++|+-|||.. .....||+.+.|+.|+.++.++-.+||.... ..+...|.++
T Consensus 7 v~gvLlDlSGtLh~-----------------------e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rl 63 (262)
T KOG3040|consen 7 VKGVLLDLSGTLHI-----------------------EDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRL 63 (262)
T ss_pred cceEEEeccceEec-----------------------ccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHh
Confidence 78999999999976 3448899999999999999999999998662 2333344444
Q ss_pred CCC---------------------------------CCCcce--------------------------------------
Q psy8912 94 NLN---------------------------------QYFSNK-------------------------------------- 102 (538)
Q Consensus 94 gL~---------------------------------~~Fd~i-------------------------------------- 102 (538)
|+. ++|+.+
T Consensus 64 gf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LI 143 (262)
T KOG3040|consen 64 GFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLI 143 (262)
T ss_pred CCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEE
Confidence 331 123222
Q ss_pred ---------------------------------eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhcCCeEE
Q psy8912 103 ---------------------------------EIYPGQKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCI 148 (538)
Q Consensus 103 ---------------------------------e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~aG~~tI 148 (538)
.+.+++.|..|+.+++.+|++|++|+||||..+ |+-.|.++||+.|
T Consensus 144 ai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgi 223 (262)
T KOG3040|consen 144 AIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGI 223 (262)
T ss_pred EecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeE
Confidence 011222335699999999999999999999976 8999999999999
Q ss_pred EECCCCCchH
Q psy8912 149 HSWLMMSSGR 158 (538)
Q Consensus 149 ~V~~G~~~~~ 158 (538)
+|.+|--...
T Consensus 224 lVkTGK~rps 233 (262)
T KOG3040|consen 224 LVKTGKFRPS 233 (262)
T ss_pred EeeccccCCc
Confidence 9999876553
No 192
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.74 E-value=3e-08 Score=104.10 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=83.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-C-------CCCCCcceeecCCCCHH-----------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPGQKTT----------- 111 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-g-------L~~~Fd~ie~~~~~Kp~----------- 111 (538)
...+.++||+.++|+.|+++|++++|+||++. ..++.+++.+ | |.++||.+. .+..||.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~-~yt~~im~~l~g~~~~~~~w~~yFD~II-t~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDY-DYTDKGMKYLLGPFLGEHDWRDYFDVVI-VDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhhCCcccccchHhhCcEEE-eCCCCCcccCCCCceEEE
Confidence 44567799999999999999999999999999 9999999996 7 889999762 2222221
Q ss_pred ------------------------HHHHHHHHcCCCCCcEEEEeCCcc-cHHHHh-hcCCeEEEECC
Q psy8912 112 ------------------------HFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHSWL 152 (538)
Q Consensus 112 ------------------------~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk-~aG~~tI~V~~ 152 (538)
......+.+|+++++++||||.+. ||.+|+ .+||++++|..
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 157778889999999999999975 999998 89999999965
No 193
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.73 E-value=6.3e-08 Score=94.57 Aligned_cols=114 Identities=19% Similarity=0.137 Sum_probs=82.8
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|+||+||||+.. ...+.|...+.|++|+++|++++++|+++. ..+...++.+++
T Consensus 1 ik~v~~DlDGTLl~~----------------------~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~-~~~~~~~~~l~~ 57 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP----------------------NRMISERAIEAIRKAEKKGIPVSLVTGNTV-PFARALAVLIGT 57 (215)
T ss_pred CcEEEEecCCCcCCC----------------------CcccCHHHHHHHHHHHHCCCEEEEEcCCcc-hhHHHHHHHhCC
Confidence 579999999999861 234667788888888888899999998877 666666666654
Q ss_pred CCCCc--------------------------------------------c------------------------------
Q psy8912 96 NQYFS--------------------------------------------N------------------------------ 101 (538)
Q Consensus 96 ~~~Fd--------------------------------------------~------------------------------ 101 (538)
..++- .
T Consensus 58 ~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 137 (215)
T TIGR01487 58 SGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGF 137 (215)
T ss_pred CCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCc
Confidence 31100 0
Q ss_pred -eeec--CCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 102 -KEIY--PGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 102 -ie~~--~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
+++. +..|...++.+++.+|++++++++|||+.+|+.+.+.+|+. +.+.++
T Consensus 138 ~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~-vam~na 191 (215)
T TIGR01487 138 AIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK-VAVANA 191 (215)
T ss_pred eEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe-EEcCCc
Confidence 0000 11234558888999999999999999999999999999986 445443
No 194
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.69 E-value=4.1e-08 Score=92.08 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=76.9
Q ss_pred hcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccccee-----------------ecCCchH
Q psy8912 417 AGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEI-----------------FPGQKTT 479 (538)
Q Consensus 417 ~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i-----------------~~~~k~~ 479 (538)
.....+.++||+.++|++|+++|++++|+|++... .++.+++++|+..+|..... ....|+.
T Consensus 67 ~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~-~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 67 FLARQVALRPGARELISWLKERGIDTVIVSGGFDF-FVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGK 145 (177)
T ss_pred HHHhcCCcCcCHHHHHHHHHHCCCEEEEECCCcHH-HHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHH
Confidence 44456779999999999999999999999999754 88999999999887752111 1114666
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHccc
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a 511 (538)
.+.+..+++|+++++|++|||+.+|+.+++.+
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 78888888999999999999999999998764
No 195
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.69 E-value=3.5e-07 Score=93.38 Aligned_cols=124 Identities=10% Similarity=0.009 Sum_probs=88.6
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----------eec-CCC--------CH-H
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----------EIY-PGQ--------KT-T 111 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----------e~~-~~~--------Kp-~ 111 (538)
..+.+.||+.++++.|+++|++++|+|++.. ..++.+++.+|+...+..+ ... +.+ |. .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 5789999999999999999999999999998 9999999999986444333 011 111 22 4
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCcccHHHHhhc-C---CeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 112 HFESLKKATG--IEYKDMVFFDDEERNSHDVSPL-G---VTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 112 ~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~a-G---~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
.++.+++.++ .++++|++|||+.+|+.||... . +-.|++.+.. .++.++.... .=|.|+.++...
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~-~e~~l~~y~~-~~Divl~~D~t~ 267 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDR-VDELLEKYMD-SYDIVLVQDETL 267 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccC-HHHHHHHHHH-hCCEEEECCCCc
Confidence 5667888998 8999999999999999998766 2 2344554432 2233333333 336666665433
No 196
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.69 E-value=5.4e-08 Score=95.33 Aligned_cols=93 Identities=5% Similarity=0.026 Sum_probs=72.2
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccccc-ceeecC-------CchHHH----------
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDH-KEIFPG-------QKTTHF---------- 481 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~-~~i~~~-------~k~~~~---------- 481 (538)
..+.++||+.++|++|+++|++++|+|++.. ..++.+|+.++..++|.+ .....+ +.+..+
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 3588999999999999999999999999975 488999998865555521 011111 112222
Q ss_pred HHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 482 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 482 ~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
..++++++..+++|+||||+.+|+.+|++||+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 46777788899999999999999999999998
No 197
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.67 E-value=4.8e-08 Score=92.07 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=76.0
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcH------------
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEI------------ 83 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p------------ 83 (538)
|...||+||||..+.-... +........++ |++.+.|++|.+.|++++|+||....
T Consensus 1 Kia~fD~DgTLi~~~s~~~-----------f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK-----------FPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT-----------S-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc-----------CcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 5789999999943211000 00012344555 58999999999999999999996221
Q ss_pred -HHHHHHHHHcCCCCCC--cce-eecCCCCHHHHHHHHHHcCC----CCCcEEEEeCC-----------cccHHHHhhcC
Q psy8912 84 -LHAKQILNLINLNQYF--SNK-EIYPGQKTTHFESLKKATGI----EYKDMVFFDDE-----------ERNSHDVSPLG 144 (538)
Q Consensus 84 -~~~~~~L~~lgL~~~F--d~i-e~~~~~Kp~~f~~ale~lgi----~P~e~L~IGDs-----------~~DI~aAk~aG 144 (538)
.....+++.+++.-.+ ... +.+.++.|.++..+++.++. +.++++||||+ ..|.+-|.++|
T Consensus 70 ~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~g 149 (159)
T PF08645_consen 70 HEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCG 149 (159)
T ss_dssp HHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcC
Confidence 3455667777765211 110 12233445899999998874 88999999996 57899999999
Q ss_pred CeEE
Q psy8912 145 VTCI 148 (538)
Q Consensus 145 ~~tI 148 (538)
++..
T Consensus 150 i~f~ 153 (159)
T PF08645_consen 150 IKFY 153 (159)
T ss_dssp --EE
T ss_pred Cccc
Confidence 9853
No 198
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.65 E-value=2.5e-07 Score=90.40 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
|...+..+++++|++++++++|||+.+|+.+++.+|.. +.+.++
T Consensus 150 K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 193 (225)
T TIGR01482 150 KGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANA 193 (225)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCCh
Confidence 55668899999999999999999999999999999995 556543
No 199
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.65 E-value=4.1e-07 Score=90.91 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=92.3
Q ss_pred hcCCCccCCCHHHHHHHh--hhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceee-------------cC-------C
Q psy8912 50 KGTLIKYYRGVPEILRYL--KENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------YP-------G 107 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~L--k~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~-------------~~-------~ 107 (538)
....+++.||+.++++.+ ++.|+.+.|+|.+.. -..+.+|+..|+.+.|+.+-. .+ .
T Consensus 66 ~l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs-~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 66 ALRSIPIDPGMKELLRFLAKNQRGFDLIIISDANS-FFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred HHHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcH-hHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence 356788899999999999 457999999999988 999999999999988876511 00 1
Q ss_pred -----CCHHHHHHHHHH---cCCCCCcEEEEeCCcccHHHHhhcCCe-EEEECCCCCchHhHHhhC-CCCCCEEEeCCch
Q psy8912 108 -----QKTTHFESLKKA---TGIEYKDMVFFDDEERNSHDVSPLGVT-CIHSWLMMSSGRLKEATG-IDYKDMIYFDDEQ 177 (538)
Q Consensus 108 -----~Kp~~f~~ale~---lgi~P~e~L~IGDs~~DI~aAk~aG~~-tI~V~~G~~~~~~~~~l~-~~~~d~Ii~d~~~ 177 (538)
+|-.+....++. -|+...+++||||+.+|+=++.+++-. .+....|+.......+-. ...+..+....+.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~ 224 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGE 224 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHH
Confidence 233445555554 478889999999999999999887664 566667776555444311 1233444444444
Q ss_pred hhH
Q psy8912 178 EHV 180 (538)
Q Consensus 178 ~~~ 180 (538)
+++
T Consensus 225 ~i~ 227 (234)
T PF06888_consen 225 EIL 227 (234)
T ss_pred HHH
Confidence 443
No 200
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.65 E-value=1.2e-07 Score=95.40 Aligned_cols=201 Identities=13% Similarity=0.139 Sum_probs=125.9
Q ss_pred cccccccccc---cccchHHHHHHhhhcCcceeeec----cccccchhhhHHhhhCCCcccccccccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALAS----RTVHIRNAYSLLHLLGLSDFFDYKEIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 375 (538)
+-|-.|||.+ .+|.+.+.+.+|+++|++.+++| |++ ......|..+|+.- ...||+.+ .--..|++..
T Consensus 5 ~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~--~~~~~~l~~~g~~~--~~~~iit~~~~~~~~l~~~ 80 (249)
T TIGR01457 5 LIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTP--ESVAEMLASFDIPA--TLETVFTASMATADYMNDL 80 (249)
T ss_pred EEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCH--HHHHHHHHHcCCCC--ChhhEeeHHHHHHHHHHhc
Confidence 3466777754 67899999999999999999998 555 45677889999964 56789988 4344556543
Q ss_pred ccCcCCCccceEEeecC-------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCC
Q psy8912 376 KKDSKIKYKDMVFFDDE-------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRT 448 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss 448 (538)
+ ++..+.++--+ +.++...+ . ....++-.+ .....|+.+...+..|+ +|.+ .++|+.
T Consensus 81 ~-----~~~~v~~lg~~~l~~~l~~~g~~~~~--~------~~~~Vvvg~-~~~~~y~~l~~a~~~l~-~g~~-~i~tN~ 144 (249)
T TIGR01457 81 K-----LEKTVYVIGEEGLKEAIKEAGYVEDK--E------KPDYVVVGL-DRQIDYEKFATATLAIR-KGAH-FIGTNG 144 (249)
T ss_pred C-----CCCEEEEEcChhHHHHHHHcCCEecC--C------CCCEEEEeC-CCCCCHHHHHHHHHHHH-CCCe-EEEECC
Confidence 2 23344444322 12221000 0 011111112 12345667777777774 6887 677765
Q ss_pred CchHHHHH--H-HhhcCCccccccc---e--eecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEEC
Q psy8912 449 TEMLRAHQ--L-VDLFNWNQHFDHK---E--IFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 449 ~~~~~a~~--~-L~~lgL~~yFd~~---~--i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~ 519 (538)
+.. .-.. . ...-.+..+|... + ....+++..|..+++.++++|++|++|||+. .||.+|+++|++++.|.
T Consensus 145 D~~-~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~ 223 (249)
T TIGR01457 145 DLA-IPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVH 223 (249)
T ss_pred CCC-CCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEc
Confidence 432 1000 0 0111111222210 1 1223456779999999999999999999997 89999999999999999
Q ss_pred CCCCHH
Q psy8912 520 DGMSHS 525 (538)
Q Consensus 520 dg~t~~ 525 (538)
+|.+..
T Consensus 224 ~G~~~~ 229 (249)
T TIGR01457 224 TGVTKA 229 (249)
T ss_pred CCCCCH
Confidence 997643
No 201
>PRK11590 hypothetical protein; Provisional
Probab=98.64 E-value=4.9e-07 Score=88.53 Aligned_cols=97 Identities=12% Similarity=0.084 Sum_probs=69.6
Q ss_pred CccCCCHHHHH-HHhhhCCceEEEEcCCCcHHHHHHHHHHcCC---CCCCcce-ee-cCC------CC-HHHHHHHHHHc
Q psy8912 54 IKYYRGVPEIL-RYLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSNK-EI-YPG------QK-TTHFESLKKAT 120 (538)
Q Consensus 54 ~~l~pgv~elL-~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL---~~~Fd~i-e~-~~~------~K-p~~f~~ale~l 120 (538)
..++||+.++| +.|+++|++++|+||++. ..++.+++.+|+ .+..... +. +.+ +. .+-...+.+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~-~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ-PLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence 56799999999 578999999999999999 999999999885 2222111 11 111 11 12244444455
Q ss_pred CCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 121 GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 121 gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
+.+...+.+-|||.+|+.+...+|-. +.|+.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp 203 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTP 203 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC-EEECc
Confidence 76778899999999999999888875 44543
No 202
>KOG3109|consensus
Probab=98.64 E-value=9.2e-08 Score=93.20 Aligned_cols=106 Identities=20% Similarity=0.259 Sum_probs=83.9
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-----------CchHHHHHHHHHhCCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-----------QKTTHFANLKKATGIE 491 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-----------~k~~~~~kal~~lgi~ 491 (538)
++-|-.+++|-.|+.++ .-+.|+..+ ..|..+|+++||.+.|+.+..... +.++.|.++++..|++
T Consensus 100 kPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 100 KPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred CCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 34445899999999886 778898875 478899999999999995443322 2356699999999998
Q ss_pred -CCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHH
Q psy8912 492 -YKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 492 -pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l 531 (538)
|..++|||||.++|++|++.|++++.|.-.-....-+.+|
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l 217 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYAL 217 (244)
T ss_pred CcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHH
Confidence 9999999999999999999999999987644333333333
No 203
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.64 E-value=2.2e-07 Score=93.45 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=122.5
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccC-cchhh------
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFP-AEKKI------ 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~------ 369 (538)
+-|=+|||.+ +-|...+.++.|+++|+..++||=-+.. .+..+++.|++..++++ .-||- ...++
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~-~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l 85 (272)
T PRK10530 7 ALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHV-AIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPL 85 (272)
T ss_pred EEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChH-HHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCC
Confidence 4578899984 6778889999999999999999855544 35678899998865443 12331 11111
Q ss_pred --hhhhhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhc-CCCCccCCCHHHHHHHHHHCCceEEEE
Q psy8912 370 --KHFANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAG-GAIIKYYRDVPAILKYLKQNNCLVAAA 445 (538)
Q Consensus 370 --~~~~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~-~~~v~l~pGv~e~L~~Lk~~GiklaIA 445 (538)
+-...|-+- .+...+ ..++.-|..-.+..+.+. . ......... ......++++.++++.++..+..+.++
T Consensus 86 ~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (272)
T PRK10530 86 PVQQALQVIEMLDEHQIH-GLMYVDDAMLYEHPTGHV-I----RTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFA 159 (272)
T ss_pred CHHHHHHHHHHHHhCCcE-EEEEcCCceEecCchHHH-H----HHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEE
Confidence 000111100 111111 222211210000000000 0 000000000 111235678889999988888888888
Q ss_pred eCCCch----HHHHHHHhhcCCcc---ccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 446 SRTTEM----LRAHQLVDLFNWNQ---HFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 446 Sss~~~----~~a~~~L~~lgL~~---yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
++.... ...+.+++.+++.- ++.+.++.+. +|...+.++++.+|+++++|++|||+.||++.++.+|+ .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~v 238 (272)
T PRK10530 160 LTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GV 238 (272)
T ss_pred EecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eE
Confidence 765421 24455566667652 2233344443 68888999999999999999999999999999999996 34
Q ss_pred EECC
Q psy8912 517 HVKD 520 (538)
Q Consensus 517 ~V~d 520 (538)
++.+
T Consensus 239 amgn 242 (272)
T PRK10530 239 AMGN 242 (272)
T ss_pred EecC
Confidence 4444
No 204
>KOG1615|consensus
Probab=98.63 E-value=2.4e-07 Score=88.75 Aligned_cols=89 Identities=17% Similarity=0.238 Sum_probs=72.6
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--------CCcce-----------eecCCCCHH
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSNK-----------EIYPGQKTT 111 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--------~Fd~i-----------e~~~~~Kp~ 111 (538)
....++-||++++...|+++|.+++++|++-+ ..+..+...+|++. .|+.- ..-++.|++
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~-~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~ 162 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFR-QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAE 162 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHH
Confidence 45678899999999999999999999999998 99999999999864 13321 112235778
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhh
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSP 142 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~ 142 (538)
.+..+.+ +.+...++||||+.+|+.|..-
T Consensus 163 ~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 163 VIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHh--CCChheeEEecCCccccccCCc
Confidence 8887766 8888999999999999887765
No 205
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.57 E-value=2.6e-07 Score=94.30 Aligned_cols=126 Identities=9% Similarity=0.045 Sum_probs=87.1
Q ss_pred ccchHhhhcC-CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc----------eeecC---
Q psy8912 410 HRDKVLDAGG-AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK----------EIFPG--- 475 (538)
Q Consensus 410 ~~~~i~d~~~-~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~----------~i~~~--- 475 (538)
....+.+... ..+.+.||+.++|++|+++|++++|+|++.. ..++.+|+++|+...|..+ ....+
T Consensus 107 ~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~ 185 (277)
T TIGR01544 107 PKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG 185 (277)
T ss_pred CHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC
Confidence 4444444443 4699999999999999999999999999976 4899999999986443210 11111
Q ss_pred ------CchHH-HHHHHHHhC--CCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHHh
Q psy8912 476 ------QKTTH-FANLKKATG--IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 476 ------~k~~~-~~kal~~lg--i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
+|.+. ++.+.+.++ .+|++||++||+.+|+.+|.-.--..--+.=|+=.+..++.|+.|.+
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~ 255 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMD 255 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHH
Confidence 23333 456778888 89999999999999999987641111122224444555666666654
No 206
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.57 E-value=2.2e-07 Score=88.06 Aligned_cols=84 Identities=18% Similarity=0.293 Sum_probs=65.0
Q ss_pred cCCCHH----HHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc-ceeecC-----------C----CCHHHHHH
Q psy8912 56 YYRGVP----EILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIYP-----------G----QKTTHFES 115 (538)
Q Consensus 56 l~pgv~----elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd-~ie~~~-----------~----~Kp~~f~~ 115 (538)
++|++. ++|+.++++|++++|+|+++. ..++.+++.+|+...+- ...... + .|...+..
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~ 164 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE 164 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence 456666 999999999999999999988 99999999999875321 111110 0 16777777
Q ss_pred H---HHHcCCCCCcEEEEeCCcccHHHHh
Q psy8912 116 L---KKATGIEYKDMVFFDDEERNSHDVS 141 (538)
Q Consensus 116 a---le~lgi~P~e~L~IGDs~~DI~aAk 141 (538)
+ ... +..+..+++|||+.+|+.+++
T Consensus 165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 6 445 889999999999999999875
No 207
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.1e-07 Score=93.66 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=85.8
Q ss_pred hhcCCC-CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee----ecC----------CchH
Q psy8912 416 DAGGAI-IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI----FPG----------QKTT 479 (538)
Q Consensus 416 d~~~~~-v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i----~~~----------~k~~ 479 (538)
+....+ ..++||+.+++++|+++|++++|+|++.. ..++++.+.+|++..+... ++ .++ .|..
T Consensus 69 ~~~~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~ 147 (212)
T COG0560 69 EEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK 147 (212)
T ss_pred HHHHHhcCcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence 334445 89999999999999999999999999986 4999999999998776511 11 111 4677
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
.....++++|++++++++++|+.+|+---+.+|..++.-+.
T Consensus 148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 78899999999999999999999999999999988876555
No 208
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.55 E-value=2.7e-07 Score=103.16 Aligned_cols=109 Identities=12% Similarity=0.134 Sum_probs=85.0
Q ss_pred CCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8912 53 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFD 131 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IG 131 (538)
...++||+.++|+.|+++| ++++++||.+. ..++.+++.+|+.++|.. ..+..|+..+ ++++..+++|+|||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~~~v----~~l~~~~~~v~~vG 454 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHAE--LLPEDKLAIV----KELQEEGGVVAMVG 454 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeecc--CCHHHHHHHH----HHHHHcCCEEEEEE
Confidence 4568999999999999999 99999999988 999999999999988886 3344455444 44444678999999
Q ss_pred CCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 132 DEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 132 Ds~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+.+|+.+++++| +++.+|...... ...+|+++.+..
T Consensus 455 Dg~nD~~al~~A~---vgia~g~~~~~~-----~~~Ad~vi~~~~ 491 (556)
T TIGR01525 455 DGINDAPALAAAD---VGIAMGAGSDVA-----IEAADIVLLNDD 491 (556)
T ss_pred CChhHHHHHhhCC---EeEEeCCCCHHH-----HHhCCEEEeCCC
Confidence 9999999999999 456666322221 135888888644
No 209
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=6.1e-07 Score=85.33 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=69.7
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCccee----------------------ecCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE----------------------IYPGQ 108 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie----------------------~~~~~ 108 (538)
...+.+-||.++++++++++++++.|+|++.. .....+++.++-.+-.+.++ .++..
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~-~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMD-PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCc-hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 55688999999999999999999999999999 89999999887333222221 12334
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
|+.......+ +++.++|+||+..|+.||+....-
T Consensus 148 K~~vI~~l~e----~~e~~fy~GDsvsDlsaaklsDll 181 (220)
T COG4359 148 KSSVIHELSE----PNESIFYCGDSVSDLSAAKLSDLL 181 (220)
T ss_pred cchhHHHhhc----CCceEEEecCCcccccHhhhhhhH
Confidence 5555555443 677899999999999999987653
No 210
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.53 E-value=3.5e-07 Score=96.07 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=80.8
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc-C-------CccccccceeecCCchHH-----------
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-N-------WNQHFDHKEIFPGQKTTH----------- 480 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l-g-------L~~yFd~~~i~~~~k~~~----------- 480 (538)
..+...||+.++|++|+++|++++|+|+++.. .++.+|+.+ | +.+|||.+ +....||.-
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~-yt~~im~~l~g~~~~~~~w~~yFD~I-It~a~KP~FF~~~~pf~~v~ 258 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYD-YTDKGMKYLLGPFLGEHDWRDYFDVV-IVDARKPGFFTEGRPFRQVD 258 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHHhhCCcccccchHhhCcEE-EeCCCCCcccCCCCceEEEe
Confidence 34667999999999999999999999999864 889999996 7 89999932 122222210
Q ss_pred ------------------------HHHHHHHhCCCCCcEEEEeccc-ccHHhHc-ccCCEEEEECCCC
Q psy8912 481 ------------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCIHVKDGM 522 (538)
Q Consensus 481 ------------------------~~kal~~lgi~pee~l~~eDs~-~~I~aAk-~aGi~~i~V~dg~ 522 (538)
.....+.+|+++++++||||.. .||.+++ .+|+.+++|-..+
T Consensus 259 ~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 259 VETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred CCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 4666777899999999999975 5799898 7999999997743
No 211
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.53 E-value=1.4e-06 Score=85.60 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=68.0
Q ss_pred CCccCCCHHHHHH-HhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce----ee-cCC------C-CHHHHHHHHHH
Q psy8912 53 LIKYYRGVPEILR-YLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----EI-YPG------Q-KTTHFESLKKA 119 (538)
Q Consensus 53 ~~~l~pgv~elL~-~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i----e~-~~~------~-Kp~~f~~ale~ 119 (538)
...++||+.++|+ .++++|++++|+||++. ..++.+.+..++..-.+.+ +. .++ + -.+-...+.+.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~-~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~ 170 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQ-PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQK 170 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcH-HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHH
Confidence 3468999999996 78999999999999988 8899988886552222211 22 111 1 11223344444
Q ss_pred cCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 120 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 120 lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
++.+...+.+-|||.+|+.+-..+|-. +.|+
T Consensus 171 ~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 171 IGSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred hCCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 566667889999999999999888875 3454
No 212
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.53 E-value=5.5e-07 Score=91.13 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEE-eCCchhhHHhhhhc
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIY-FDDEQEHVNDISKL 186 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii-~d~~~~~~~~i~~~ 186 (538)
..+.+++.+|+++++++.|||+.+|+.+-+.+|. ++.+.++. .+..+.. .. ..|+ .+..+.....+++.
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~Na~--~~vK~~A--~~-~~v~~~n~edGva~~l~~~ 261 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-GFIMGNAM--PQLRAEL--PH-LPVIGHCRNQAVSHYLTHW 261 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-ceeccCCh--HHHHHhC--CC-CeecCCCcchHHHHHHHHH
Confidence 3678889999999999999999999999999997 55565432 2322211 11 1233 33566666666654
No 213
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.52 E-value=5.7e-07 Score=78.42 Aligned_cols=98 Identities=17% Similarity=0.119 Sum_probs=62.8
Q ss_pred EEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHcCCC
Q psy8912 19 VVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLINLN 96 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~lgL~ 96 (538)
|+||+|||||. ...++||+.++|+.|+++|+++.++||++.. ......|+.+|+.
T Consensus 1 ~l~D~dGvl~~-----------------------g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYN-----------------------GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEE-----------------------TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEe-----------------------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 68999999997 6789999999999999999999999999742 3455566788875
Q ss_pred CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 97 QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 97 ~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
--.+. +... .......+++. -....++++|-. ......+++|+
T Consensus 58 ~~~~~--i~ts--~~~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 58 VDEDE--IITS--GMAAAEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --GGG--EEEH--HHHHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred CCcCE--EECh--HHHHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22222 2221 23333334432 235677778755 33445555554
No 214
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.51 E-value=2.3e-07 Score=103.72 Aligned_cols=93 Identities=10% Similarity=0.102 Sum_probs=76.6
Q ss_pred CCCCccCCCHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNN-CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~G-iklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
..+..++||+.++|++|+++| ++++++|+.+. ..++.+++++|+.+||.. +.+.+|. +++++++..+++|+|
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~----~~v~~l~~~~~~v~~ 452 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHAE--LLPEDKL----AIVKELQEEGGVVAM 452 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeecc--CCHHHHH----HHHHHHHHcCCEEEE
Confidence 335679999999999999999 99999998875 489999999999999983 3333444 344555557889999
Q ss_pred EecccccHHhHcccCCEEEEECCC
Q psy8912 498 FDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+||+.+|+.++++|| ++|.+|
T Consensus 453 vGDg~nD~~al~~A~---vgia~g 473 (556)
T TIGR01525 453 VGDGINDAPALAAAD---VGIAMG 473 (556)
T ss_pred EECChhHHHHHhhCC---EeEEeC
Confidence 999999999999999 566666
No 215
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.51 E-value=2e-07 Score=95.44 Aligned_cols=67 Identities=27% Similarity=0.373 Sum_probs=58.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
.+++|+||+||||... ...+++- ||+.++|++|+++|++++|+||+.+ ..+...++.+
T Consensus 125 ~~kvIvFDLDgTLi~~--------------------~~~v~irdPgV~EaL~~LkekGikLaIaTS~~R-e~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD--------------------EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDR-DHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcCC--------------------CCccccCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHc
Confidence 4799999999999862 1234444 9999999999999999999999988 8899999999
Q ss_pred CCCCCCcce
Q psy8912 94 NLNQYFSNK 102 (538)
Q Consensus 94 gL~~~Fd~i 102 (538)
|+..+|+.+
T Consensus 184 GLd~YFdvI 192 (301)
T TIGR01684 184 KLDRYFDII 192 (301)
T ss_pred CCCcccCEE
Confidence 999999876
No 216
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.51 E-value=5.1e-07 Score=88.37 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=73.8
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc-ee-----ecC------CchHHHHHHHHHh
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK-EI-----FPG------QKTTHFANLKKAT 488 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~-~i-----~~~------~k~~~~~kal~~l 488 (538)
.+.++||+.++|++|+++| +++|+|++... .+.++++++|+..+|... .+ .++ .......+.+++.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~-~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYE-FSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCChHH-HHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 4789999999999999985 99999999765 899999999999988621 11 111 1122244444555
Q ss_pred CCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 489 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 489 gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+ .+|++|||+.+|+..++.+|..++..+.
T Consensus 144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred C---CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 5 3899999999999999999999987655
No 217
>PRK10976 putative hydrolase; Provisional
Probab=98.50 E-value=7.2e-07 Score=89.77 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 112 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 112 ~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
.++.+++.+|++++++++|||+.+|+.+-+.+|.. +++.++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~-vAm~NA 234 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKG-CIMGNA 234 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence 36778889999999999999999999999999984 556554
No 218
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.45 E-value=3.2e-07 Score=102.18 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=77.0
Q ss_pred CCCccCCCHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 420 AIIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
.+..++||+.++|++|+++|+ +++++|+.+. ..++.+++++|+.+||. ...+.+| ..++++++.++++++|+
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K----~~~i~~l~~~~~~v~~v 431 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHA--ELLPEDK----LEIVKELREKYGPVAMV 431 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhh--ccCcHHH----HHHHHHHHhcCCEEEEE
Confidence 346799999999999999999 9999998875 58999999999999997 3333334 34556666777999999
Q ss_pred ecccccHHhHcccCCEEEEECCCC
Q psy8912 499 DDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 499 eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
||+.+|+.++++||+ +|.+|.
T Consensus 432 GDg~nD~~al~~A~v---gia~g~ 452 (536)
T TIGR01512 432 GDGINDAPALAAADV---GIAMGA 452 (536)
T ss_pred eCCHHHHHHHHhCCE---EEEeCC
Confidence 999999999999995 666663
No 219
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.44 E-value=2.3e-06 Score=86.17 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhhh
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDISK 185 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~~ 185 (538)
..+..+++.+|++++++++|||+.+|+.+-+.+|. ++.+.++. ... +. .+++|..+ ..+.....+.+
T Consensus 199 ~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA~--~~v-K~----~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 199 TGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNAI--PSV-KE----VAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCcc--HHH-HH----hcCeeccCCCcchHHHHHHH
Confidence 33677788999999999999999999999999998 45565543 222 22 35677644 44555554444
No 220
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.44 E-value=1.4e-06 Score=87.77 Aligned_cols=59 Identities=27% Similarity=0.245 Sum_probs=49.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++|+|+||+||||... ...+.+.+.++|++++++|++++++|+++. ..+...++.++
T Consensus 2 ~~kli~~DlDGTLl~~----------------------~~~i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~ 58 (264)
T COG0561 2 MIKLLAFDLDGTLLDS----------------------NKTISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELG 58 (264)
T ss_pred CeeEEEEcCCCCccCC----------------------CCccCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcC
Confidence 4799999999999751 233777889999999999999999999988 88888888886
Q ss_pred CC
Q psy8912 95 LN 96 (538)
Q Consensus 95 L~ 96 (538)
+.
T Consensus 59 ~~ 60 (264)
T COG0561 59 LD 60 (264)
T ss_pred CC
Confidence 54
No 221
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.44 E-value=1.1e-06 Score=97.29 Aligned_cols=88 Identities=18% Similarity=0.274 Sum_probs=72.5
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCch-----------HHHHHHHhhcCCccccccceeecC------CchHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEM-----------LRAHQLVDLFNWNQHFDHKEIFPG------QKTTHFANLKK 486 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~-----------~~a~~~L~~lgL~~yFd~~~i~~~------~k~~~~~kal~ 486 (538)
++|||.+.|+.|+++||+++|+|+...- ..+..+|+++|+. |+.. +.+. +++.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvi-ia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVF-IAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEE-EeCCCCCCCCCCHHHHHHHHH
Confidence 6899999999999999999999987651 2478889999985 7732 2221 34677999999
Q ss_pred HhC----CCCCcEEEEecccccHHhHcccCCE
Q psy8912 487 ATG----IEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 487 ~lg----i~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
+++ +++++++||||+..++++++++|..
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 984 9999999999999999999988864
No 222
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.39 E-value=1.4e-06 Score=86.90 Aligned_cols=209 Identities=11% Similarity=0.085 Sum_probs=116.8
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeecccc---ccchhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTV---HIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|-.|+|. +.||.+.+.+..|+++|++..+.|.++ ..+.+..+...+|+. ...+|++.|..=+.+|-+-+.
T Consensus 2 lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~--~~~~~iits~~~~~~~l~~~~ 79 (236)
T TIGR01460 2 LFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD--VSPDQIITSGSVTKDLLRQRF 79 (236)
T ss_pred EEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC--CCHHHeeeHHHHHHHHHHHhC
Confidence 346777776 589999999999999999999998443 345666666668885 678999998434444332111
Q ss_pred CcCCCccceEEeecC-------CCCcC-C-CCCCccccc-ccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeC
Q psy8912 378 DSKIKYKDMVFFDDE-------ERNAR-S-ISKLGVIGI-QVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASR 447 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld-------h~~~s-~-~~p~~~i~i-~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASs 447 (538)
+-..+.++=-+ ...+. . .+....... ....-.+..... + --+.-.......+ ++|=..-++|+
T Consensus 80 ----~~~~v~v~G~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~vv~~~~~-~-~~~~~~~~a~~~l-~~~~~~~i~tN 152 (236)
T TIGR01460 80 ----EGEKVYVIGVGELRESLEGLGFRNDFFDDIDHLAIEKIPAAVIVGEPS-D-FSYDELAKAAYLL-AEGDVPFIAAN 152 (236)
T ss_pred ----CCCEEEEECCHHHHHHHHHcCCcCcccCcccccccCCCCeEEEECCCC-C-cCHHHHHHHHHHH-hCCCCeEEEEC
Confidence 11223333222 11111 0 000000000 000001111000 0 0111222223333 35523446675
Q ss_pred CCchHHHHHHHhhcCCccccccc------e--eecCCchHHHHHHHHHhCCCCCcE-EEEeccc-ccHHhHcccCCEEEE
Q psy8912 448 TTEMLRAHQLVDLFNWNQHFDHK------E--IFPGQKTTHFANLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCIH 517 (538)
Q Consensus 448 s~~~~~a~~~L~~lgL~~yFd~~------~--i~~~~k~~~~~kal~~lgi~pee~-l~~eDs~-~~I~aAk~aGi~~i~ 517 (538)
.+.--....-....++..+|+.. . ....+++..|..++++++++++++ +||||+. .||.+|+++|++++.
T Consensus 153 ~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~ 232 (236)
T TIGR01460 153 RDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLL 232 (236)
T ss_pred CCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEE
Confidence 44210000112334555555511 1 123356777999999999999998 9999998 899999999999999
Q ss_pred ECCC
Q psy8912 518 VKDG 521 (538)
Q Consensus 518 V~dg 521 (538)
|.+|
T Consensus 233 v~~G 236 (236)
T TIGR01460 233 VLTG 236 (236)
T ss_pred EecC
Confidence 9876
No 223
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.37 E-value=1.6e-06 Score=96.59 Aligned_cols=107 Identities=13% Similarity=0.169 Sum_probs=82.9
Q ss_pred CccCCCHHHHHHHhhhCCc-eEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8912 54 IKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDD 132 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~Gi-kiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGD 132 (538)
..++||+.++|++|+++|+ +++++||.+. ..++.+++.+|+.++|.. ..+..|+. ++++++..+++++||||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~~--~~p~~K~~----~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHAE--LLPEDKLE----IVKELREKYGPVAMVGD 433 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhhc--cCcHHHHH----HHHHHHhcCCEEEEEeC
Confidence 4578999999999999999 9999999988 999999999999988876 33444444 45555556689999999
Q ss_pred CcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 133 EERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 133 s~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
+.+|+.+++++|+ ++.+|....... ...+|.++.+
T Consensus 434 g~nD~~al~~A~v---gia~g~~~~~~~----~~~ad~vl~~ 468 (536)
T TIGR01512 434 GINDAPALAAADV---GIAMGASGSDVA----IETADVVLLN 468 (536)
T ss_pred CHHHHHHHHhCCE---EEEeCCCccHHH----HHhCCEEEEC
Confidence 9999999999996 455563222211 2257888854
No 224
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.37 E-value=9e-07 Score=90.71 Aligned_cols=67 Identities=30% Similarity=0.356 Sum_probs=58.0
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccC-CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~-pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
.++.|+||+||||... ...+++- |++.++|++|+++|++++|+||+++ +.+...++.+
T Consensus 127 ~~~~i~~D~D~TL~~~--------------------~~~v~irdp~V~EtL~eLkekGikLaIvTNg~R-e~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLITD--------------------EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNR-EHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccCC--------------------CCccccCChhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHc
Confidence 4789999999999762 2234444 9999999999999999999999988 8999999999
Q ss_pred CCCCCCcce
Q psy8912 94 NLNQYFSNK 102 (538)
Q Consensus 94 gL~~~Fd~i 102 (538)
|+..+|+.+
T Consensus 186 gL~~yFDvI 194 (303)
T PHA03398 186 KLEGYFDII 194 (303)
T ss_pred CCCccccEE
Confidence 999999865
No 225
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.31 E-value=3.4e-06 Score=82.21 Aligned_cols=55 Identities=25% Similarity=0.188 Sum_probs=45.9
Q ss_pred EEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 19 VVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
|+||+||||.+. ...+.|...++|+.|+++|++++++|+++. ..+...+..+++.
T Consensus 1 i~~DlDGTLl~~----------------------~~~i~~~~~~al~~l~~~g~~~~i~TGR~~-~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNS----------------------DGKISPETIEALKELQEKGIKLVIATGRSY-SSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCST----------------------TSSSCHHHHHHHHHHHHTTCEEEEECSSTH-HHHHHHHHHTTHC
T ss_pred cEEEECCceecC----------------------CCeeCHHHHHHHHhhcccceEEEEEccCcc-cccccccccccch
Confidence 689999999751 233668899999999999999999999988 8888888877553
No 226
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.30 E-value=4.6e-06 Score=83.55 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
..++.+++.+|++++++++|||+.+|+.+.+.+|+.+
T Consensus 191 ~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~ 227 (256)
T TIGR00099 191 SALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGV 227 (256)
T ss_pred HHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCcee
Confidence 3478888999999999999999999999999999863
No 227
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.29 E-value=3.1e-06 Score=94.85 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=79.5
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
..++||+.++|++|+++|++++++||.+. ..++.+++.+|++ +|.. ..+..|++.++. +..++++|+||||+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~~--~~p~~K~~~v~~----l~~~~~~v~~VGDg 475 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRAE--VLPDDKAALIKE----LQEKGRVVAMVGDG 475 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEcc--CChHHHHHHHHH----HHHcCCEEEEEeCC
Confidence 45689999999999999999999999988 9999999999985 4443 233344444444 34477899999999
Q ss_pred cccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 134 ERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 134 ~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
.+|+.+++++|+. +.+|.... .....+|+++.+.
T Consensus 476 ~nD~~al~~A~vg---ia~g~g~~-----~a~~~Advvl~~~ 509 (562)
T TIGR01511 476 INDAPALAQADVG---IAIGAGTD-----VAIEAADVVLMRN 509 (562)
T ss_pred CccHHHHhhCCEE---EEeCCcCH-----HHHhhCCEEEeCC
Confidence 9999999999973 44443322 2223578888753
No 228
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.27 E-value=4.6e-06 Score=80.16 Aligned_cols=123 Identities=13% Similarity=0.141 Sum_probs=89.3
Q ss_pred cceEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC-------------
Q psy8912 384 KDMVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT------------- 449 (538)
Q Consensus 384 ~~l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~------------- 449 (538)
++.++||.| -.|+ +-++ . .+ .-....+.||+.+.|..|++.||++.++|+-+
T Consensus 5 ~k~lflDRDGtin~-d~~~-y-----------v~-~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINI-DKGD-Y-----------VD-SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceec-CCCc-c-----------cC-cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 789999999 3454 1111 1 11 11236689999999999999999999999721
Q ss_pred -chHHHHHHHhhcCCccccccceeec--------C--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 -EMLRAHQLVDLFNWNQHFDHKEIFP--------G--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 -~~~~a~~~L~~lgL~~yFd~~~i~~--------~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
...+....|+..|. -|+...+++ + +++.+++.++++.+++++..++|||+..|+++|.++|+..+.+
T Consensus 71 ~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~ 148 (181)
T COG0241 71 KLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLV 148 (181)
T ss_pred HHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEE
Confidence 01245566777674 344222222 2 4677799999999999999999999999999999999998777
Q ss_pred CCCC
Q psy8912 519 KDGM 522 (538)
Q Consensus 519 ~dg~ 522 (538)
..|.
T Consensus 149 ~~~~ 152 (181)
T COG0241 149 LTGI 152 (181)
T ss_pred EcCc
Confidence 6653
No 229
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.25 E-value=2.4e-06 Score=80.37 Aligned_cols=89 Identities=13% Similarity=0.027 Sum_probs=64.6
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc-cccccceeecCCchHHHHHHH-HHhCCCCCcEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEIFPGQKTTHFANLK-KATGIEYKDMV 496 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~-~yFd~~~i~~~~k~~~~~kal-~~lgi~pee~l 496 (538)
...+.++||+.++|++|++. +.++|.|++.+ +.|..+|+.++.. .||....++...-...+.|-+ .-++.+.+.+|
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~-~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~vv 131 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTR-AYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMVV 131 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcH-HHHHHHHHHhCcCCCeeccEEEEeccCCCCccccHHHHcCCCcccEE
Confidence 34577899999999999965 99999999975 4999999999998 589421222221112344455 33588999999
Q ss_pred EEecccccHHhHc
Q psy8912 497 FFDDEERNSHDVS 509 (538)
Q Consensus 497 ~~eDs~~~I~aAk 509 (538)
+|||+..-...-.
T Consensus 132 ivDd~~~~~~~~~ 144 (156)
T TIGR02250 132 IIDDREDVWPWHK 144 (156)
T ss_pred EEeCCHHHhhcCc
Confidence 9999986544433
No 230
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.25 E-value=2.5e-06 Score=95.62 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
-+..++||+.++|++|+++|++++++|+.+. ..++.+++++|+. +|. ...+.+|.+ .+++++.++++|+|||
T Consensus 402 ~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~--~~~p~~K~~----~v~~l~~~~~~v~~VG 473 (562)
T TIGR01511 402 LEDQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRA--EVLPDDKAA----LIKELQEKGRVVAMVG 473 (562)
T ss_pred ecccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEc--cCChHHHHH----HHHHHHHcCCEEEEEe
Confidence 3467899999999999999999999998875 5899999999995 665 233334443 3444555789999999
Q ss_pred cccccHHhHcccCC
Q psy8912 500 DEERNSHDVSPLGV 513 (538)
Q Consensus 500 Ds~~~I~aAk~aGi 513 (538)
|+.+|+.++++||+
T Consensus 474 Dg~nD~~al~~A~v 487 (562)
T TIGR01511 474 DGINDAPALAQADV 487 (562)
T ss_pred CCCccHHHHhhCCE
Confidence 99999999999996
No 231
>PRK10444 UMP phosphatase; Provisional
Probab=98.25 E-value=3.7e-05 Score=77.57 Aligned_cols=195 Identities=10% Similarity=0.074 Sum_probs=115.3
Q ss_pred cccccccccc---cccchHHHHHHhhhcCcceeeecccccc--chhhhHHhhhCCCcccccccccCcchhhhhhhhcccC
Q psy8912 304 VEDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVHI--RNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKD 378 (538)
Q Consensus 304 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (538)
+-|-.|+|.+ ++|.+.+.+.+|++.|++..++|=++.. ..-.+-|..+|+. +...||++|..=+.+|=+-+
T Consensus 5 ~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~--~~~~~i~ts~~~~~~~L~~~-- 80 (248)
T PRK10444 5 ICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD--VPDSVFYTSAMATADFLRRQ-- 80 (248)
T ss_pred EEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CCHhhEecHHHHHHHHHHhC--
Confidence 4577788764 5999999999999999999999866653 2233444667874 46778898854444443222
Q ss_pred cCCCccceEEeecC-------CCCcC--CCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 379 SKIKYKDMVFFDDE-------ERNAR--SISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 379 ~~~~~~~l~~~Dld-------h~~~s--~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
. ...+.++-=+ ..++. .-.| . ..+.. .... --|.-.......+ ++|.+ -++|+.+
T Consensus 81 ~---~~~v~~~g~~~l~~~l~~~g~~~~~~~~-~--------~Vvvg-~~~~-~~~~~l~~a~~~l-~~g~~-~i~~n~D 144 (248)
T PRK10444 81 E---GKKAYVIGEGALIHELYKAGFTITDINP-D--------FVIVG-ETRS-YNWDMMHKAAYFV-ANGAR-FIATNPD 144 (248)
T ss_pred C---CCEEEEEcCHHHHHHHHHCcCEecCCCC-C--------EEEEe-CCCC-CCHHHHHHHHHHH-HCCCE-EEEECCC
Confidence 1 1223333222 11110 0000 0 01111 1100 1122333334444 35655 5677544
Q ss_pred chHHHHHHHhhcCCc-------cccc---c--ceeecCCchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEE
Q psy8912 450 EMLRAHQLVDLFNWN-------QHFD---H--KEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCI 516 (538)
Q Consensus 450 ~~~~a~~~L~~lgL~-------~yFd---~--~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i 516 (538)
.. . -|+. ..+. . ......+++..|..++++++++|++|+||||+. .||.+|+++|++++
T Consensus 145 ~~---~-----~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~v 216 (248)
T PRK10444 145 TH---G-----RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI 216 (248)
T ss_pred CC---C-----CCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEE
Confidence 21 0 0111 0111 1 112234567789999999999999999999997 89999999999999
Q ss_pred EECCCCCHHH
Q psy8912 517 HVKDGMSHSV 526 (538)
Q Consensus 517 ~V~dg~t~~~ 526 (538)
+|.+|.+..+
T Consensus 217 lV~~G~~~~~ 226 (248)
T PRK10444 217 LVLSGVSTLD 226 (248)
T ss_pred EECCCCCCHH
Confidence 9999977543
No 232
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.20 E-value=1.4e-05 Score=78.18 Aligned_cols=187 Identities=14% Similarity=0.117 Sum_probs=104.8
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCC-cccccc---cccCc-chhhhhhhhc
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLS-DFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
-|=+|||++ ..+..++.++.|+++||+.++||=-+. ..+..+++.|++. .++.|. -||-. ..++
T Consensus 4 ~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~-~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~------ 76 (221)
T TIGR02463 4 SDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTA-AEVEYLQKALGLTGDPYIAENGAAIHLEELWRE------ 76 (221)
T ss_pred EeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc------
Confidence 467899887 345578999999999999999996555 4468889999997 444431 23321 1000
Q ss_pred ccCcCCCccceEEeecC-------------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceE
Q psy8912 376 KKDSKIKYKDMVFFDDE-------------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 442 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikl 442 (538)
++.-++...-++ +.+.. +..+. .......... ..+.....+ +..+++.++.+
T Consensus 77 -----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~ 141 (221)
T TIGR02463 77 -----EPGYPRIILGISYGIIRLVLETLSEELHFK-FTPFD----DLSDAEIAEL----TGLSGSQAA-LAQDREASVPL 141 (221)
T ss_pred -----CCCceEEecCCCHHHHHHHHHHHHHHhCCC-ceehh----hCCHHHHHHH----hCcCHHHHH-HHHhccCCccE
Confidence 000001111111 00000 00000 0000000000 111111111 22223344444
Q ss_pred EE-EeCCCchHHHHHHHhhcCCc----cccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 443 AA-ASRTTEMLRAHQLVDLFNWN----QHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 443 aI-ASss~~~~~a~~~L~~lgL~----~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.+ .+... .+.+...++..++. .+|. ++.+. +|......+++.+|+++++|++|||+.||+...+.+|..+
T Consensus 142 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~--ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 142 LWRDSDSR-MPRFTALLADLGLAIVQGNRFS--HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred EecCchhH-HHHHHHHHHHcCCeEEecCCee--EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 44 33332 33455677777776 5554 45443 6888899999999999999999999999999999999665
Q ss_pred E
Q psy8912 516 I 516 (538)
Q Consensus 516 i 516 (538)
+
T Consensus 219 a 219 (221)
T TIGR02463 219 V 219 (221)
T ss_pred E
Confidence 3
No 233
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.20 E-value=1.8e-05 Score=79.20 Aligned_cols=47 Identities=11% Similarity=-0.019 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
+|...++.+++.+|+++++|++|||+.+|+.+.+.+|..+++|.++.
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 46677899999999999999999999999999999888888887643
No 234
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.19 E-value=8.4e-06 Score=82.82 Aligned_cols=198 Identities=16% Similarity=0.130 Sum_probs=112.2
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
+-|=+|||++ +++.+.+.++.|+++|+++++||-.+. .-+..++..+++.++|++. .||-. ..+. -.+
T Consensus 8 ~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~-~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~---~~~ 83 (273)
T PRK00192 8 FTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTA-AEVEVLRKELGLEDPFIVENGAAIYIPKNYFP---FQP 83 (273)
T ss_pred EEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCEEEEcCcEEEecccccc---cCC
Confidence 4678899986 677789999999999999999986654 4467789999998777653 34321 1000 001
Q ss_pred ccCcCCCccceEEeecC-------------CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceE
Q psy8912 376 KKDSKIKYKDMVFFDDE-------------ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLV 442 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dld-------------h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikl 442 (538)
+..-.....++.-.-++ +.+. ++.... ......+... .. .| .+.++.++.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~-~~~~~~~~~~----~~-~~--~~~~~~~~~~~~~~ 151 (273)
T PRK00192 84 DGERLKGDYWVIELGPPYEELREILDEISDELGY----PLKGFG-DLSAEEVAEL----TG-LS--GESARLAKDREFSE 151 (273)
T ss_pred ccccccCCceEEEcCCCHHHHHHHHHHHHHHhCC----Ceeehh-hCCHHHHHHH----hC-cC--HHHHHHHHhcccCC
Confidence 10000011122222222 0010 000000 0000001110 01 12 12234455666665
Q ss_pred EEE---eCCCchHHHHHHHhhcCCc----cccccceeecC-CchHHHHHHHHHhCCCC-CcEEEEecccccHHhHcccCC
Q psy8912 443 AAA---SRTTEMLRAHQLVDLFNWN----QHFDHKEIFPG-QKTTHFANLKKATGIEY-KDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 443 aIA---Sss~~~~~a~~~L~~lgL~----~yFd~~~i~~~-~k~~~~~kal~~lgi~p-ee~l~~eDs~~~I~aAk~aGi 513 (538)
.++ +... .+.+...++.+++. .+|. ++.+. +|...+..+++.+|+++ +++++|||+.+|+..++.+|.
T Consensus 152 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~--ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~ 228 (273)
T PRK00192 152 PFLWNGSEAA-KERFEEALKRLGLKVTRGGRFL--HLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADI 228 (273)
T ss_pred ceeecCchHH-HHHHHHHHHHcCCEEEECCeEE--EEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCe
Confidence 554 3322 23455667777765 4444 34333 66667889999999999 999999999999999999985
Q ss_pred EEEEECCC
Q psy8912 514 TCIHVKDG 521 (538)
Q Consensus 514 ~~i~V~dg 521 (538)
.+ ++.++
T Consensus 229 ~v-am~NA 235 (273)
T PRK00192 229 AV-VVPGP 235 (273)
T ss_pred eE-EeCCC
Confidence 44 44443
No 235
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.18 E-value=9.4e-06 Score=78.35 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
|+..++.++++++++++++++|||+.+|+.+++.+|+..
T Consensus 164 K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 164 KGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 556789999999999999999999999999999999864
No 236
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.17 E-value=1.6e-05 Score=80.99 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=63.5
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHHhhcCCccccccceee---cCCchHHHHHHHHHhCCCCCc
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNWNQHFDHKEIF---PGQKTTHFANLKKATGIEYKD 494 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L~~lgL~~yFd~~~i~---~~~k~~~~~kal~~lgi~pee 494 (538)
....++||+.++|++|+++|++++++|++... +.+...|+.+|+..++....+. ...|......+.+..++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 35779999999999999999999999987633 2345778999997655321222 13567777777665555
Q ss_pred EEEEecccccHHhH
Q psy8912 495 MVFFDDEERNSHDV 508 (538)
Q Consensus 495 ~l~~eDs~~~I~aA 508 (538)
+++|||...|+.++
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 89999999998664
No 237
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.16 E-value=2.3e-06 Score=70.16 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=47.9
Q ss_pred CCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 475 GQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 475 ~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
.+.+..|..++++++++|++|++|||+ ..||.+|+++|+.+|+|.+|....+.
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~ 57 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED 57 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH
Confidence 356777999999999999999999999 99999999999999999999876543
No 238
>PLN02887 hydrolase family protein
Probab=98.15 E-value=2.5e-05 Score=87.68 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=45.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhhh
Q psy8912 113 FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDIS 184 (538)
Q Consensus 113 f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i~ 184 (538)
+..+++.+|++++++++|||+.+|+.+-+.+|. .|++.++. ... +. .+++|..+ ..+.+...+.
T Consensus 512 Lk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA~--eeV-K~----~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 512 VKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNGA--EKT-KA----VADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCCC--HHH-HH----hCCEEeCCCCcCHHHHHHH
Confidence 556678889999999999999999999999998 46666543 222 22 35777644 4455544444
No 239
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.06 E-value=6.9e-06 Score=81.94 Aligned_cols=123 Identities=15% Similarity=0.109 Sum_probs=77.5
Q ss_pred CCceEEEeCCCCCChhhHh--hhh---chhHH-HHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVH--DLV---APFKK-IGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~--~~i---~~~~~-~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
.+.+|+||+|+|+...... ... .++.. .+...+. .....+.||+.++++.++++|+.|+++||.+.. ...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~--~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVA--SGKAPAIPGALELYNYARSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHH--CTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHh--cccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHH
Confidence 3679999999998543211 111 11111 1222222 223489999999999999999999999997652 456
Q ss_pred HHHHHHcCCCCCCcce--eecC-CC------CHHHHHHHHHH-cCCCCCcEEEEeCCcccHHHHhhc
Q psy8912 87 KQILNLINLNQYFSNK--EIYP-GQ------KTTHFESLKKA-TGIEYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~i--e~~~-~~------Kp~~f~~ale~-lgi~P~e~L~IGDs~~DI~aAk~a 143 (538)
...|.+.|....-..+ .... .. |......+.++ +.+ +++|||...|+..++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred HHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 6678888864322221 1111 11 44555666565 455 78899999999885443
No 240
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.05 E-value=7.8e-06 Score=83.84 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=54.1
Q ss_pred CCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC-CCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 380 KIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 380 ~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~-pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
-.+.|.++|||||-==+ .+ ...+.+. ||+.++|++|+++|+++||+||+.++ .+...|
T Consensus 122 ~~~~~kvIvFDLDgTLi------------------~~--~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re-~v~~~L 180 (301)
T TIGR01684 122 VFEPPHVVVFDLDSTLI------------------TD--EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRD-HVVESM 180 (301)
T ss_pred ccccceEEEEecCCCCc------------------CC--CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHH
Confidence 34667899999992111 00 1124455 89999999999999999999999865 778899
Q ss_pred hhcCCcccccc
Q psy8912 459 DLFNWNQHFDH 469 (538)
Q Consensus 459 ~~lgL~~yFd~ 469 (538)
+.+||.+||+.
T Consensus 181 ~~lGLd~YFdv 191 (301)
T TIGR01684 181 RKVKLDRYFDI 191 (301)
T ss_pred HHcCCCcccCE
Confidence 99999999983
No 241
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.05 E-value=6.3e-06 Score=96.46 Aligned_cols=86 Identities=12% Similarity=0.090 Sum_probs=73.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
.-.++||+.+.|++|+++|++++++|+.+. ..++.+++++|+.++|.. ..+.+ -.+++++++..++++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~~--~~p~~----K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIAG--VLPDG----KAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEeC--CCHHH----HHHHHHHHhhcCCEEEEEeC
Confidence 456899999999999999999999998875 488999999999988873 22223 34567778888999999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
+.+|+.++++||+
T Consensus 721 g~nD~~al~~Agv 733 (834)
T PRK10671 721 GINDAPALAQADV 733 (834)
T ss_pred CHHHHHHHHhCCe
Confidence 9999999999999
No 242
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.05 E-value=1.8e-05 Score=84.94 Aligned_cols=124 Identities=22% Similarity=0.242 Sum_probs=93.5
Q ss_pred CCCceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
..-|++++|+|||||.--+.... .++ --.......+|-...+++..|+++|+-++|+|-+.. ..+..+..+
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI-------~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~-~da~evF~k 291 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGI-------RLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTE-KDAKEVFRK 291 (574)
T ss_pred cccceEEEecCCcccccccccccccce-------eecCCCCchhHHHHHHHHHHHHhccEEEEEecCCch-hhHHHHHhh
Confidence 34689999999999963221111 000 000122345566678999999999999999999978 888888877
Q ss_pred cCC----CCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCC
Q psy8912 93 INL----NQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV 145 (538)
Q Consensus 93 lgL----~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~ 145 (538)
+.- .+.|+...+...+|.+-++++++++|+..+..+|++|++...+-.++.+-
T Consensus 292 hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 292 HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 751 24566667777889999999999999999999999999998888887665
No 243
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.04 E-value=2.2e-05 Score=92.02 Aligned_cols=114 Identities=8% Similarity=-0.000 Sum_probs=85.3
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.++||+.+.|+.|+++|++++++|+.+. ..++.+++.+|+.++|... .|+.-..++++++..+++++||||+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~~~------~p~~K~~~i~~l~~~~~~v~~vGDg~ 722 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIAGV------LPDGKAEAIKRLQSQGRQVAMVGDGI 722 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEeCC------CHHHHHHHHHHHhhcCCEEEEEeCCH
Confidence 5679999999999999999999999988 8999999999998777652 24334456677777889999999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC-CchhhHHhh
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD-DEQEHVNDI 183 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d-~~~~~~~~i 183 (538)
+|+.+++++|+ . +.+|.......+ .+|.+..+ +...+...+
T Consensus 723 nD~~al~~Agv-g--ia~g~g~~~a~~-----~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 723 NDAPALAQADV-G--IAMGGGSDVAIE-----TAAITLMRHSLMGVADAL 764 (834)
T ss_pred HHHHHHHhCCe-e--EEecCCCHHHHH-----hCCEEEecCCHHHHHHHH
Confidence 99999999999 3 444444333322 35666654 333444333
No 244
>PRK08238 hypothetical protein; Validated
Probab=98.04 E-value=1.5e-05 Score=87.59 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeec---CCch-HHHHHHHHHhCCCCCcEE
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---GQKT-THFANLKKATGIEYKDMV 496 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---~~k~-~~~~kal~~lgi~pee~l 496 (538)
.++++||+.++|++++++|++++++|++++. .++.+++++|+ ||...... ..++ .....+.+.++ .++++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~-~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~ 143 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDER-LAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFD 143 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCee
Confidence 3567899999999999999999999999864 89999999998 66321111 1221 12344445565 46699
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
|+||+.+|+..++.+| +.+.|..+
T Consensus 144 yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 144 YAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred EecCCHHHHHHHHhCC-CeEEECCC
Confidence 9999999999999999 77777654
No 245
>KOG3120|consensus
Probab=98.03 E-value=4e-05 Score=75.12 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=76.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCc-eEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecC---------------------CC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYP---------------------GQ 108 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~Gi-kiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~---------------------~~ 108 (538)
...+...||+.++++.+++.|. -+.|+|.++. -..+.+|+++|+.+.|+.|-..| .+
T Consensus 80 ~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNs-fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 80 LRSIPIVPGMVRLIKSAAKLGCFELIIVSDANS-FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred HhcCCCCccHHHHHHHHHhCCCceEEEEecCch-hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 5567788999999999999986 9999999988 99999999999988887651100 01
Q ss_pred CHH-----H---HHHHHHHcCCCCCcEEEEeCCcccHHHHhh-cCCeEEEECCCCCchH
Q psy8912 109 KTT-----H---FESLKKATGIEYKDMVFFDDEERNSHDVSP-LGVTCIHSWLMMSSGR 158 (538)
Q Consensus 109 Kp~-----~---f~~ale~lgi~P~e~L~IGDs~~DI~aAk~-aG~~tI~V~~G~~~~~ 158 (538)
++. . |..-.-+-|+..++.+|+||+.+|+=+... .+...+....|+....
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWK 217 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHh
Confidence 221 1 222223457888999999999999655544 4555555556665433
No 246
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.01 E-value=1.3e-05 Score=76.37 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=78.7
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH----hhcCCccc----cccceeecCCchHHHHHHHHHhCCCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV----DLFNWNQH----FDHKEIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L----~~lgL~~y----Fd~~~i~~~~k~~~~~kal~~lgi~p 492 (538)
..++||++.+.|+..|++|+++.|-||.+.+ |++++ ...+|.+| ||. .++...+..-|.++++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~--AQkL~Fghs~agdL~~lfsGyfDt-tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK--AQKLFFGHSDAGDLNSLFSGYFDT-TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCch--hHHHhhcccccccHHhhhcceeec-cccccccchhHHHHHHhcCCCc
Confidence 3579999999999999999999999998764 56554 22234444 443 4444456667999999999999
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
.|++|.-|...-+.||+.+|+.++.+-.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R 205 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVR 205 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeec
Confidence 9999999999999999999999988744
No 247
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.00 E-value=9.5e-06 Score=76.32 Aligned_cols=120 Identities=18% Similarity=0.097 Sum_probs=77.0
Q ss_pred CceEEEeCCCCCChhhHhhhh-chhH--------HHHHHH----HhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLV-APFK--------KIGQKV----MDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i-~~~~--------~~~~~i----~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
-..+++|+|.||+.+...... .... +..... .......+.++||+.++|+.|++. +.++|+|++.+
T Consensus 6 kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~ 84 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTR 84 (156)
T ss_pred ceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcH
Confidence 467999999999654422211 0000 000000 011234567899999999999966 99999999999
Q ss_pred HHHHHHHHHHcCCC-CCC-cceeecCCCCHHHHHHHH-HHcCCCCCcEEEEeCCcccHH
Q psy8912 83 ILHAKQILNLINLN-QYF-SNKEIYPGQKTTHFESLK-KATGIEYKDMVFFDDEERNSH 138 (538)
Q Consensus 83 p~~~~~~L~~lgL~-~~F-d~ie~~~~~Kp~~f~~al-e~lgi~P~e~L~IGDs~~DI~ 138 (538)
..+..+++.++.. .+| +.+-...... ..+.+-+ .-++.+.+.+++|+|++.-..
T Consensus 85 -~yA~~vl~~ldp~~~~F~~ri~~rd~~~-~~~~KdL~~i~~~d~~~vvivDd~~~~~~ 141 (156)
T TIGR02250 85 -AYAQAIAKLIDPDGKYFGDRIISRDESG-SPHTKSLLRLFPADESMVVIIDDREDVWP 141 (156)
T ss_pred -HHHHHHHHHhCcCCCeeccEEEEeccCC-CCccccHHHHcCCCcccEEEEeCCHHHhh
Confidence 9999999999988 488 4331111111 1222223 445788899999999985433
No 248
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.97 E-value=6.2e-05 Score=73.49 Aligned_cols=178 Identities=20% Similarity=0.169 Sum_probs=102.8
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCcchhhhhhhhccc
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPAEKKIKHFANLKK 377 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 377 (538)
-|=+|||.+ +.|...+.+++|+++||..++||-.+... +..++..|++..++.+. .|+........|+.
T Consensus 3 ~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~--- 78 (225)
T TIGR01482 3 SDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQF-ARALAKLIGTPDPVIAENGGEISYNEGMDDIFLA--- 78 (225)
T ss_pred EeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHhCCCCeEEEecCcEEEeCCCCceEEec---
Confidence 466788874 55667778899999999999999765544 45688999977665441 33332110111100
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
-+++ .|.. ..+. .. ..+...+...+..+.....+.++.. ++.+..+
T Consensus 79 ------------~~~~-------~~~~-------~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 124 (225)
T TIGR01482 79 ------------YLEE-------EWFL-------DIVI-AK------TFPFSRLKVQYPRRASLVKMRYGID-VDTVREI 124 (225)
T ss_pred ------------ccCH-------HHHH-------HHHH-hc------ccchhhhccccccccceEEEeecCC-HHHHHHH
Confidence 0000 0000 0000 00 0000011111111222334444443 3456677
Q ss_pred HhhcCCcccc----ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 458 VDLFNWNQHF----DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 458 L~~lgL~~yF----d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+++.-.+ .+.++.+. +|...+.++++++|++++++++|||+.||+...+.+|.. ++|.++
T Consensus 125 ~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na 193 (225)
T TIGR01482 125 IKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANA 193 (225)
T ss_pred HHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCCh
Confidence 7777753111 12234433 688889999999999999999999999999999999985 566663
No 249
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.94 E-value=1.6e-05 Score=81.62 Aligned_cols=74 Identities=18% Similarity=0.181 Sum_probs=56.5
Q ss_pred cccCcCC-CccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC-CCHHHHHHHHHHCCceEEEEeCCCchH
Q psy8912 375 LKKDSKI-KYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY-RDVPAILKYLKQNNCLVAAASRTTEML 452 (538)
Q Consensus 375 ~~~~~~~-~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~-pGv~e~L~~Lk~~GiklaIASss~~~~ 452 (538)
++..+-. +.|.++|||+|.-=+ .. ...+.+. ||+.++|++|+++|+++||+||++++
T Consensus 118 ~~~~~~~~~~~~~i~~D~D~TL~-------------------~~-~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re- 176 (303)
T PHA03398 118 LKSESLVWEIPHVIVFDLDSTLI-------------------TD-EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNRE- 176 (303)
T ss_pred hccceeEeeeccEEEEecCCCcc-------------------CC-CCccccCChhHHHHHHHHHHCCCEEEEEcCCChH-
Confidence 3444433 778999999992111 00 1134455 89999999999999999999998765
Q ss_pred HHHHHHhhcCCcccccc
Q psy8912 453 RAHQLVDLFNWNQHFDH 469 (538)
Q Consensus 453 ~a~~~L~~lgL~~yFd~ 469 (538)
.+...|+.+||.+||+.
T Consensus 177 ~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 177 HVVHSLKETKLEGYFDI 193 (303)
T ss_pred HHHHHHHHcCCCccccE
Confidence 77889999999999983
No 250
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.93 E-value=3.7e-05 Score=76.68 Aligned_cols=128 Identities=13% Similarity=-0.060 Sum_probs=79.7
Q ss_pred CceEEEeCCCCCChhh--Hhhhh---chhHHH-HHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHH---H
Q psy8912 16 PKMVVFDLDYTLWPLH--VHDLV---APFKKI-GQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---A 86 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~--~~~~i---~~~~~~-~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~---~ 86 (538)
..+||||+|.|+.... ..... .++... +...+. .....+.|++.++++.|+++|++++++|+.+. .. .
T Consensus 77 ~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~--~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e-~~r~~T 153 (229)
T TIGR01675 77 MDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLG--KGAAPALPEGLKLYQKIIELGIKIFLLSGRWE-ELRNAT 153 (229)
T ss_pred CcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHH--cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh-HHHHHH
Confidence 5799999999995433 11111 222221 222221 44568999999999999999999999999976 44 6
Q ss_pred HHHHHHcCCCCCCcceee---cCCC------CHHHHHHHHH-HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 87 KQILNLINLNQYFSNKEI---YPGQ------KTTHFESLKK-ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~ie~---~~~~------Kp~~f~~ale-~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
...|...|+..+ +..-. .... |.+....+.+ .+.| +..|||..+|+..+ .+|.+++-+++
T Consensus 154 ~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI----v~~iGDq~sDl~G~-~~~~RtFKLPN 223 (229)
T TIGR01675 154 LDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI----WGNIGDQWSDLLGS-PPGRRTFKLPN 223 (229)
T ss_pred HHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceE----EEEECCChHHhcCC-CccCceeeCCC
Confidence 677888887654 33211 1112 2233333332 1333 56799999998554 56667665544
No 251
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.93 E-value=6.9e-05 Score=73.18 Aligned_cols=176 Identities=18% Similarity=0.135 Sum_probs=106.2
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccCcchhhhhhhhcc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFPAEKKIKHFANLK 376 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 376 (538)
+-|=+|||.+ +-|...+.+++|+++|+..++||-.+.. .+..+++.|++...+++ ..||-...++ .+ .
T Consensus 5 ~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~-~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~-~~---~ 79 (215)
T TIGR01487 5 AIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVP-FARALAVLIGTSGPVVAENGGVIFYNKEDI-FL---A 79 (215)
T ss_pred EEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcch-hHHHHHHHhCCCCcEEEccCcEEEeCCCcE-EE---e
Confidence 3477888884 5577888999999999999999866544 46778999999866664 3444322111 00 0
Q ss_pred cCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 377 KDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 377 ~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
. ....+++.. + ..+. ........ ... +...+.+.++.. .+.++.
T Consensus 80 ~---~~~~~~~~~---~------~~~~---------~~~~~~~~-------------~~~-~~~~~~~~~~~~-~~~~~~ 123 (215)
T TIGR01487 80 N---MEEEWFLDE---E------KKKR---------FPRDRLSN-------------EYP-RASLVIMREGKD-VDEVRE 123 (215)
T ss_pred c---ccchhhHHH---h------hhhh---------hhhhhccc-------------ccc-eeEEEEecCCcc-HHHHHH
Confidence 0 000000000 0 0000 00000000 000 123344555544 346677
Q ss_pred HHhhcCCccccc--cceeec--CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 457 LVDLFNWNQHFD--HKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 457 ~L~~lgL~~yFd--~~~i~~--~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.++..++..++. ..++.+ .+|...+..+++.+|++++++++|||+.+|++..+.+|..+ ++.++
T Consensus 124 ~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~v-am~na 191 (215)
T TIGR01487 124 IIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKV-AVANA 191 (215)
T ss_pred HHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeE-EcCCc
Confidence 788777765532 123333 27888899999999999999999999999999999999764 44443
No 252
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.91 E-value=1.7e-05 Score=73.89 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=89.1
Q ss_pred CCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccC---CCHHHHHHHHHHCCceEEEEeCCCchHHHHH
Q psy8912 380 KIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYY---RDVPAILKYLKQNNCLVAAASRTTEMLRAHQ 456 (538)
Q Consensus 380 ~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~---pGv~e~L~~Lk~~GiklaIASss~~~~~a~~ 456 (538)
+++.-.|++||.| |........++..|++++-| +|. -++.|.+.|+++||.|..+.+ .++.
T Consensus 4 ra~~IkLli~DVD-------------GvLTDG~ly~~~~Gee~KaFnv~DG~--Gik~l~~~Gi~vAIITGr~s~-ive~ 67 (170)
T COG1778 4 RAKNIKLLILDVD-------------GVLTDGKLYYDENGEEIKAFNVRDGH--GIKLLLKSGIKVAIITGRDSP-IVEK 67 (170)
T ss_pred hhhhceEEEEecc-------------ceeecCeEEEcCCCceeeeeeccCcH--HHHHHHHcCCeEEEEeCCCCH-HHHH
Confidence 3455679999999 11112223344445444433 332 256677889999999998876 8888
Q ss_pred HHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 457 LVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 457 ~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
-.+.+|+..+|. +..+|...|..+++++++.|++|.|+||-.+|+-.-++.|..+.
T Consensus 68 Ra~~LGI~~~~q----G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 68 RAKDLGIKHLYQ----GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred HHHHcCCceeee----chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 999999998887 45578888999999999999999999999999999998888763
No 253
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.88 E-value=7.2e-05 Score=88.22 Aligned_cols=113 Identities=15% Similarity=0.112 Sum_probs=85.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---------------------eecCCCCHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------------------EIYPGQKTTHF 113 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---------------------e~~~~~Kp~~f 113 (538)
++.||+.++++.|+++|+++.++|+... ..+..+.+.+|+...++.+ .++.+..|+.-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQ-ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 6789999999999999999999999988 9999999999997655432 24455567555
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
..+.+.++-..+.+.|+||+.+|+.|.++|++ ++..|....+. ....+|+++.++
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~v----a~~aaDivl~dd 661 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDV----AKEAADMILTDD 661 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCCCcCHH----HHHhcCEEEcCC
Confidence 55555555556889999999999999999996 35455322221 123578888664
No 254
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.86 E-value=9.9e-05 Score=70.28 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=76.3
Q ss_pred CccCCCHHHHHHHHHHCCce--EEEEeCCC------chHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCC---
Q psy8912 422 IKYYRDVPAILKYLKQNNCL--VAAASRTT------EMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGI--- 490 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~Gik--laIASss~------~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi--- 490 (538)
-.+.|.+.+.+++|++.+.. +.|+|+|. ....++.+-+.+|+. +| .....||.-+.++++.++.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl----~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VL----RHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EE----EeCCCCCccHHHHHHHHhhccC
Confidence 44678899999999998775 99999883 345777777888853 21 2344677667777777654
Q ss_pred --CCCcEEEEeccc-ccHHhHcccCCEEEEECCCCC
Q psy8912 491 --EYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 491 --~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t 523 (538)
.|+|+++|||+. .|+..|...|+.+|.|++|.+
T Consensus 133 ~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv~ 168 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGVT 168 (168)
T ss_pred CCCchhEEEEcchHHHHHHHhhccCceEEEEecCcC
Confidence 599999999995 699999999999999999864
No 255
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.86 E-value=8e-05 Score=73.85 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
+|+..++.+++++|+++++|++|||+.+|+.+.+.+|.. +.+.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~n 202 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGN 202 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcC
Confidence 577889999999999999999999999999999998864 45654
No 256
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.81 E-value=3.4e-05 Score=78.37 Aligned_cols=63 Identities=22% Similarity=0.216 Sum_probs=52.9
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
|+|+|++|+||||.+. .-.+.+.+.++|+.|+++|++++++|+++. ..+...++.++
T Consensus 3 ~~kli~~DlDGTLl~~----------------------~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~-~~~~~~~~~l~ 59 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH----------------------HTYSYEPAKPALKALKEKGIPVIPCTSKTA-AEVEVLRKELG 59 (273)
T ss_pred cceEEEEcCcccCcCC----------------------CCcCcHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcC
Confidence 5899999999999861 234667899999999999999999999988 88888899888
Q ss_pred CCCCCc
Q psy8912 95 LNQYFS 100 (538)
Q Consensus 95 L~~~Fd 100 (538)
+..+|-
T Consensus 60 l~~~~i 65 (273)
T PRK00192 60 LEDPFI 65 (273)
T ss_pred CCCCEE
Confidence 765443
No 257
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.80 E-value=0.00016 Score=67.95 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=69.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHH---HHHHHH--
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA---KQILNL-- 92 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~---~~~L~~-- 92 (538)
+|+||+||||........+ .. ....-...|++.+++++|+++|+++.++|+.+. ... +..+..
T Consensus 1 iVisDIDGTL~~sd~~~~~----------~~-~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~-~~~~~t~~~l~~~~ 68 (157)
T smart00775 1 IVISDIDGTITKSDVLGHV----------VP-IIGKDWTHPGVAKLYRDIQNNGYKILYLTARPI-GQADRTRSYLSQIK 68 (157)
T ss_pred CEEEecCCCCccccccccc----------cc-ccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcH-HHHHHHHHHHHHhh
Confidence 4899999999763311111 00 011135679999999999999999999999976 444 356655
Q ss_pred ---cCCCC-C-Ccce-eec-------CCCCH-----HHHHHHHHHcCCCCCcE-EEEeCCcccHHHHhhcCCe
Q psy8912 93 ---INLNQ-Y-FSNK-EIY-------PGQKT-----THFESLKKATGIEYKDM-VFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 93 ---lgL~~-~-Fd~i-e~~-------~~~Kp-----~~f~~ale~lgi~P~e~-L~IGDs~~DI~aAk~aG~~ 146 (538)
.++.. . +-.- ... -..+| +....+.+.+.-.-... +.+||+.+|+.+-+++|+.
T Consensus 69 ~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 69 QDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred hccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 23321 1 1000 000 01223 33444444433212233 3488889999999999996
No 258
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.67 E-value=1.8e-05 Score=73.76 Aligned_cols=125 Identities=21% Similarity=0.203 Sum_probs=73.2
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC-
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL- 95 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL- 95 (538)
|+++||+||||+........+ .............+.+.||+.++|+.|.+. +.++|.|++.. .+++.+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~---~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~-~ya~~v~~~ldp~ 75 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLP---YDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASE-EYAEPVLDALDPN 75 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT----SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-H-HHHHHHHHHHTTT
T ss_pred CEEEEeCCCcEEEEeecCCCC---cccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehh-hhhhHHHHhhhhh
Confidence 689999999996533211000 000000001123466789999999999665 99999999988 999999999986
Q ss_pred CCCCcceeecCCCC--HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQYFSNKEIYPGQK--TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~Fd~ie~~~~~K--p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+|+.+-...... ...+.+-++.+|-+++++++|+|++.-...-...++.
T Consensus 76 ~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~ 128 (159)
T PF03031_consen 76 GKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIP 128 (159)
T ss_dssp TSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE
T ss_pred ccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEE
Confidence 46777652111110 0111255666777889999999998754333444444
No 259
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.63 E-value=0.00029 Score=76.00 Aligned_cols=163 Identities=21% Similarity=0.247 Sum_probs=115.4
Q ss_pred ccccccchhhhHHhhhCCCcccccccccCcch----hhhhhhh-----cccCcCCCccceEEeecCCCCcCCCCCCc---
Q psy8912 336 SRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEK----KIKHFAN-----LKKDSKIKYKDMVFFDDEERNARSISKLG--- 403 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~l~~~Dldh~~~s~~~p~~--- 403 (538)
+|--.+|-+ .|++.+|...+|++++.++++. |.-|-.. |-..-+=+-+..+|+|||. ..|+
T Consensus 166 ~r~~~fD~~-~l~srig~~~~~d~k~~~~a~~~~n~e~~~l~~~ei~Sl~~A~~g~~kK~LVLDLDN------TLWGGVI 238 (574)
T COG3882 166 GRWLMFDQE-ALASRIGIERWFDPKAYHSASVPFNVELCPLAADEIASLLAAMSGKSKKALVLDLDN------TLWGGVI 238 (574)
T ss_pred cceeeccHH-HHHhHhhhhhhcchHHHHhccCCcchhhhhHhhHHHHHHHHHhhCcccceEEEecCC------ccccccc
Confidence 455566654 6889999999999999999853 3344322 2222334567799999992 0122
Q ss_pred ----ccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC----ccccccceeecC
Q psy8912 404 ----VIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW----NQHFDHKEIFPG 475 (538)
Q Consensus 404 ----~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL----~~yFd~~~i~~~ 475 (538)
+=|++..+ + .+=.+|....+++..|+++|+-|||||-++ ...|..+.++.-= .+.|+...+...
T Consensus 239 GedGv~GI~Ls~------~-~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~-~~da~evF~khp~MiLkeedfa~~~iNW~ 310 (574)
T COG3882 239 GEDGVDGIRLSN------S-AEGEAFKTFQNFIKGLKKQGVLLAVCSKNT-EKDAKEVFRKHPDMILKEEDFAVFQINWD 310 (574)
T ss_pred ccccccceeecC------C-CCchhHHHHHHHHHHHHhccEEEEEecCCc-hhhHHHHHhhCCCeEeeHhhhhhheecCC
Confidence 11111111 1 122356667889999999999999999775 4467766654321 246666677777
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
+|++.+++++++|++--+.++|+||.+...+-.++.+-
T Consensus 311 ~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 311 PKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999775
No 260
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.61 E-value=0.00037 Score=70.96 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc---CCeEEEECCC
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHSWLM 153 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a---G~~tI~V~~G 153 (538)
.....+++.+|+..+++++|||..+|+.+-+.+ |..+|.|..+
T Consensus 177 ~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred HHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 447778889999999999999999998877766 4556777544
No 261
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.61 E-value=0.00037 Score=70.14 Aligned_cols=198 Identities=17% Similarity=0.219 Sum_probs=105.0
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc----------ccccCcchhh
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY----------KEIFPAEKKI 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 369 (538)
+-|=+|||++ +=+..+..+++|+++|++.++|+-.+. ..++.+++.|++..++++ +.+|...---
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~ 85 (264)
T COG0561 7 AFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSR 85 (264)
T ss_pred EEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCH
Confidence 4567788765 556778889999999999999998887 889999999999986654 3333332222
Q ss_pred hhhhhcccCcCCC-ccceEEeecC----CCCcC--CCCCCcccccccccchHhhhcCCCCcc----CCCHHHHHHHHHHC
Q psy8912 370 KHFANLKKDSKIK-YKDMVFFDDE----ERNAR--SISKLGVIGIQVHRDKVLDAGGAIIKY----YRDVPAILKYLKQN 438 (538)
Q Consensus 370 ~~~~~~~~~~~~~-~~~l~~~Dld----h~~~s--~~~p~~~i~i~~~~~~i~d~~~~~v~l----~pGv~e~L~~Lk~~ 438 (538)
++.+.|-.-.+-. --.+..+..| .++.. ....+.............+........ .+-..+..+.++++
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 165 (264)
T COG0561 86 EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKR 165 (264)
T ss_pred HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhh
Confidence 3333333222111 1122333333 11111 000011000000000000000000000 11122222233332
Q ss_pred Cc--eEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCE
Q psy8912 439 NC--LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 439 Gi--klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
-- ...+.||. + + ..++.+. +|..-...+++++|+++++++.|||+.||++--+.+|..
T Consensus 166 ~~~~~~~~~~s~--~--------------~--~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 166 FPDLGLTVSSSG--P--------------I--SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ccccceEEEEcC--C--------------c--eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCee
Confidence 11 11111111 1 0 0234443 688889999999999999999999999999999988765
Q ss_pred EEEECCC
Q psy8912 515 CIHVKDG 521 (538)
Q Consensus 515 ~i~V~dg 521 (538)
+ ++.++
T Consensus 228 v-am~Na 233 (264)
T COG0561 228 V-AMGNA 233 (264)
T ss_pred e-eccCC
Confidence 5 44443
No 262
>PLN02382 probable sucrose-phosphatase
Probab=97.60 E-value=0.0012 Score=71.62 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHc---CCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHh---hCCCCCCEEEeC--Cchhh
Q psy8912 108 QKTTHFESLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEA---TGIDYKDMIYFD--DEQEH 179 (538)
Q Consensus 108 ~Kp~~f~~ale~l---gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~---l~~~~~d~Ii~d--~~~~~ 179 (538)
.|-.....+++++ |++++++++|||+.+|+.+-+.+|...|.+.++. .+..+. .....++++... ....+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~--~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ--EELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc--HHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 4667788999998 9999999999999999999999997778886643 222221 123344666433 46677
Q ss_pred HHhhhhcCCc
Q psy8912 180 VNDISKLGVT 189 (538)
Q Consensus 180 ~~~i~~~g~~ 189 (538)
.+.+.+.++.
T Consensus 253 ~~al~~f~l~ 262 (413)
T PLN02382 253 IQAIGHFNLG 262 (413)
T ss_pred HHHHHHhCCC
Confidence 7788887654
No 263
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.60 E-value=0.00039 Score=69.66 Aligned_cols=58 Identities=9% Similarity=-0.081 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhc-------CCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~a-------G~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
|...+..+++++++.+.+++||||+.+|+.+++.+ |..++.|.+|. ....+++++.+.
T Consensus 168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---------~~~~A~~~~~~~ 232 (244)
T TIGR00685 168 KGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---------KKTVAKFHLTGP 232 (244)
T ss_pred HHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---------cCCCceEeCCCH
Confidence 55778999999999999999999999999999988 77788886442 234567766643
No 264
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.59 E-value=0.00014 Score=68.84 Aligned_cols=82 Identities=16% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc-cceeec-----------C--C--chHHHHHH---HH
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD-HKEIFP-----------G--Q--KTTHFANL---KK 486 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd-~~~i~~-----------~--~--k~~~~~ka---l~ 486 (538)
|++.++|++++++|+++.|+|++.. ..++.+++.+|+...+- +..... + . |+..+.++ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence 5555999999999999999999975 49999999999986432 111111 0 1 66666666 34
Q ss_pred HhCCCCCcEEEEecccccHHhHc
Q psy8912 487 ATGIEYKDMVFFDDEERNSHDVS 509 (538)
Q Consensus 487 ~lgi~pee~l~~eDs~~~I~aAk 509 (538)
+ +..+..+++|||+.+|+..+|
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 4 889999999999999998764
No 265
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.58 E-value=0.00055 Score=67.10 Aligned_cols=176 Identities=19% Similarity=0.164 Sum_probs=98.3
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCc-chhhhhhhhc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPA-EKKIKHFANL 375 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 375 (538)
+-|=+|||.+ +-|...+.+.+|+++|++.++||--+... +..++..|++..++.+. .||-. ..++. |+.
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~-~~~- 83 (230)
T PRK01158 7 AIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCF-ARAAAKLIGTSGPVIAENGGVISVGFDGKRI-FLG- 83 (230)
T ss_pred EEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHhCCCCcEEEecCeEEEEcCCCCEE-EEc-
Confidence 4578899885 45677788999999999999998666443 55678899998765442 23311 10110 000
Q ss_pred ccCcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCC---C-ccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 376 KKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAI---I-KYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 376 ~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~---v-~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
.++ . . +.++ ..+.+.+... + ...+.. .-..+.+.+... .
T Consensus 84 ----~~~--~-----~----------~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~ 126 (230)
T PRK01158 84 ----DIE--E-----C----------EKAY------SELKKRFPEASTSLTKLDPDY---------RKTEVALRRTVP-V 126 (230)
T ss_pred ----chH--H-----H----------HHHH------HHHHHhccccceeeecCCccc---------ccceeeeccccc-H
Confidence 000 0 0 0000 0000000000 0 000000 001223333332 2
Q ss_pred HHHHHHHhhcCCcc-ccc---cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 452 LRAHQLVDLFNWNQ-HFD---HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 452 ~~a~~~L~~lgL~~-yFd---~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+.+...++.++..- ++. +.++.+. +|...+..+++.+|++++++++|||+.||+...+.+|..+ ++.+
T Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v-am~N 200 (230)
T PRK01158 127 EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGV-AVAN 200 (230)
T ss_pred HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceE-EecC
Confidence 34556666665321 111 1233333 6888899999999999999999999999999999999865 5554
No 266
>PRK11590 hypothetical protein; Provisional
Probab=97.58 E-value=0.00043 Score=67.78 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=70.3
Q ss_pred CCccCCCHHHHH-HHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc--cce---eecC-------CchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAIL-KYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HKE---IFPG-------QKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L-~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd--~~~---i~~~-------~k~~~~~kal~~ 487 (538)
.+.+|||+.++| +.|+++|++++|+|++.+. .++++++.+|+..-.. +.. .+++ ...+...++.+.
T Consensus 93 ~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~-~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~ 171 (211)
T PRK11590 93 NVTAFPVVQERLTTYLLSSDADVWLITGSPQP-LVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERK 171 (211)
T ss_pred hCcCCccHHHHHHHHHHhCCCEEEEEeCCcHH-HHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHH
Confidence 367899999999 6789999999999999865 8899999999622111 101 1111 123334445455
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+...+.+.+||.+|+.--..+|-.++--|+
T Consensus 172 ~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 172 IGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 677888899999999999888888776654443
No 267
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.55 E-value=0.00027 Score=83.50 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=78.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccc---------------------eeecCCchH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHK---------------------EIFPGQKTT 479 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~---------------------~i~~~~k~~ 479 (538)
+-+++||+.+.++.|++.|+++.++|..+ +..|..+.+.+||..+++.. .++.+..|+
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDS-QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 44789999999999999999999999876 55999999999998776521 234444555
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
.-..+++.++-..+.+.++||..||+.|.++|++ +|.+|.
T Consensus 605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~ 644 (884)
T TIGR01522 605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQ 644 (884)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCC
Confidence 5566666666667899999999999999999994 555654
No 268
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.55 E-value=0.00026 Score=70.93 Aligned_cols=181 Identities=13% Similarity=0.076 Sum_probs=102.7
Q ss_pred ccccccccc-------cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcc--ccc---ccccCcchhhhhh
Q psy8912 305 EDAKGTLLN-------LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDF--FDY---KEIFPAEKKIKHF 372 (538)
Q Consensus 305 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~ 372 (538)
-|=+|||++ +-|...+.++.|+++||...+|| +-++...+.++..+++... +.+ .+||-..
T Consensus 6 tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT-GR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~------ 78 (249)
T TIGR01485 6 SDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST-GRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG------ 78 (249)
T ss_pred EcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc-CCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC------
Confidence 467788885 66888999999999999888886 3345577888888887543 333 2333211
Q ss_pred hhcccCcCCCccceEEeecC---CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 373 ANLKKDSKIKYKDMVFFDDE---ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 373 ~~~~~~~~~~~~~l~~~Dld---h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
.. .-|.. +.+ .+|.. .. -..+...+. .+.+-+ .+.++-+++.+.....
T Consensus 79 ------~~-------~~~~~~~~~~~----~~~~~---~~-~~~~~~~~~-~l~~~~-------~~~~~~~k~~~~~~~~ 129 (249)
T TIGR01485 79 ------AE-------VPDQHWAEYLS----EKWQR---DI-VVAITDKFE-ELKPQP-------DLEQRPHKVSFFLDPE 129 (249)
T ss_pred ------CC-------cCCHHHHHHHh----cccCH---HH-HHHHHhcCc-ccccCC-------ccccCCeeEEEEechh
Confidence 00 00000 000 12220 00 000111010 111111 1123446666665332
Q ss_pred c-h---HHHHHHHhhcCCcccc-----ccceeec--CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 450 E-M---LRAHQLVDLFNWNQHF-----DHKEIFP--GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 450 ~-~---~~a~~~L~~lgL~~yF-----d~~~i~~--~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
. . ......+..+++.-.+ .+.++.+ .+|...+..+++.+|+++++|++|||+.||+...+.+|..+++|
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~ 209 (249)
T TIGR01485 130 AAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV 209 (249)
T ss_pred hhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE
Confidence 1 0 1113334444432100 1123433 27888899999999999999999999999999999988889999
Q ss_pred CCC
Q psy8912 519 KDG 521 (538)
Q Consensus 519 ~dg 521 (538)
.++
T Consensus 210 ~na 212 (249)
T TIGR01485 210 SNA 212 (249)
T ss_pred CCC
Confidence 874
No 269
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.54 E-value=0.00018 Score=69.39 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=53.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH------HHHHHHHHHc-CCCCCCcceeecCCCCHHHHHHHHHHcCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEI------LHAKQILNLI-NLNQYFSNKEIYPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p------~~~~~~L~~l-gL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~ 123 (538)
-...+|.||+.++|++|.+.|..+.++|+.+.+ ......++++ +. -.++.+ +..+.|. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~-~~~~~K~--------~v~~- 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNL-IFTGDKT--------LVGG- 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCE-EEESSGG--------GC---
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheE-EEecCCC--------eEec-
Confidence 456789999999999999999777777776542 1222333333 21 011222 3334442 1222
Q ss_pred CCcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 124 YKDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 124 P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
+ ++|+|++.++..+...|+.++++...++
T Consensus 138 --D-vlIDD~~~n~~~~~~~g~~~iLfd~p~N 166 (191)
T PF06941_consen 138 --D-VLIDDRPHNLEQFANAGIPVILFDQPYN 166 (191)
T ss_dssp --S-EEEESSSHHHSS-SSESSEEEEE--GGG
T ss_pred --c-EEecCChHHHHhccCCCceEEEEcCCCC
Confidence 2 7899999999999999999999976443
No 270
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.53 E-value=0.00062 Score=78.92 Aligned_cols=104 Identities=9% Similarity=0.037 Sum_probs=76.5
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.++||+.+.+++|+++|++++++|+.+. ..++.+.+.+|+..++. ..|..|+...+. ++ .+..++||||+.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~~v~~----l~-~~~~v~mvGDgi 638 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVKAVTE----LN-QHAPLAMVGDGI 638 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHHHHHH----Hh-cCCCEEEEECCH
Confidence 6789999999999999999999999988 99999999999964433 234445554443 33 346899999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|..+.+.+++. +..|.......+ .+|.+..+.
T Consensus 639 NDapAl~~A~vg---ia~g~~~~~a~~-----~adivl~~~ 671 (741)
T PRK11033 639 NDAPAMKAASIG---IAMGSGTDVALE-----TADAALTHN 671 (741)
T ss_pred HhHHHHHhCCee---EEecCCCHHHHH-----hCCEEEecC
Confidence 999999999953 333433333222 257776553
No 271
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.52 E-value=0.00037 Score=70.96 Aligned_cols=131 Identities=8% Similarity=-0.032 Sum_probs=76.9
Q ss_pred CceEEEeCCCCCChhh--Hhhhh---chhHHH-HH-HHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHH
Q psy8912 16 PKMVVFDLDYTLWPLH--VHDLV---APFKKI-GQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHA 86 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~--~~~~i---~~~~~~-~~-~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~ 86 (538)
-++||||+|+|+.... ..... .++... +. ..+ ......+.|++.++.+.|+++|++|.++||.+.. ...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv--~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFV--NKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHH--hcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 3799999999995322 11111 222211 12 211 2446678999999999999999999999999752 335
Q ss_pred HHHHHHcCCCCCCcce--e-ecC-CCCH-HHHH-----HHHH-HcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCC
Q psy8912 87 KQILNLINLNQYFSNK--E-IYP-GQKT-THFE-----SLKK-ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~i--e-~~~-~~Kp-~~f~-----~ale-~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G 153 (538)
...|.+.|+..+ +.. . ... ..+. -.|+ ++.+ .+.| +..|||..+|+......+-++.-+++.
T Consensus 179 ~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrI----v~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 179 EANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGYNI----VGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred HHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCceE----EEEECCCHHhccCCCccCcceecCCCc
Confidence 556677787543 322 0 111 1111 1122 2222 1333 677999999986554323566666543
No 272
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.51 E-value=0.00022 Score=82.62 Aligned_cols=84 Identities=8% Similarity=0.052 Sum_probs=67.5
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+-.++||+.+.+++|+++|+++.++|..+. ..++.+.+.+||..+|. ..+.+|+.. +++++ .++.++||||
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~~----v~~l~-~~~~v~mvGD 636 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVKA----VTELN-QHAPLAMVGD 636 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHHH----HHHHh-cCCCEEEEEC
Confidence 357899999999999999999999998764 58999999999975554 233345553 34444 3468999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
..||..+.++|++
T Consensus 637 giNDapAl~~A~v 649 (741)
T PRK11033 637 GINDAPAMKAASI 649 (741)
T ss_pred CHHhHHHHHhCCe
Confidence 9999999999993
No 273
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.48 E-value=0.00034 Score=76.27 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=69.6
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---------CCCCCCcceeecCCCCHH------------
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGQKTT------------ 111 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---------gL~~~Fd~ie~~~~~Kp~------------ 111 (538)
.+..-|.+..+|+.||++|.++.++||++- ..+...+..+ .|.++||.| +....||.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFDvV-Iv~A~KP~FF~~~~pfr~vd 258 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFDVV-IVDARKPGFFTEGRPFREVD 258 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCECEE-EES--CCHHHCT---EEEEE
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhheeEE-EEcCCCCcccCCCCceEEEE
Confidence 345568899999999999999999999988 8998888865 356799976 22222221
Q ss_pred ------------------------HHHHHHHHcCCCCCcEEEEeCCcc-cHHHHhhc-CCeEEEECCC
Q psy8912 112 ------------------------HFESLKKATGIEYKDMVFFDDEER-NSHDVSPL-GVTCIHSWLM 153 (538)
Q Consensus 112 ------------------------~f~~ale~lgi~P~e~L~IGDs~~-DI~aAk~a-G~~tI~V~~G 153 (538)
......+.+|....+++||||+.. ||..++.. |++|++|..-
T Consensus 259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 156777888999999999999975 88888775 9999999753
No 274
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.48 E-value=0.0013 Score=66.68 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=89.9
Q ss_pred ceEEEeCCCCC-----------Chhh-Hhhhh---chhHHHHHHHH-------hhhcCCCccCCCHHHHHHHhhhCCceE
Q psy8912 17 KMVVFDLDYTL-----------WPLH-VHDLV---APFKKIGQKVM-------DAKGTLIKYYRGVPEILRYLKENKCLV 74 (538)
Q Consensus 17 KaVIFDlDGTL-----------w~~~-~~~~i---~~~~~~~~~i~-------~~~~~~~~l~pgv~elL~~Lk~~Giki 74 (538)
-.|+||+|.|| |..+ ...+. +.......+.+ ......-.+-+++.++++.|+++|+++
T Consensus 21 tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~~v 100 (252)
T PF11019_consen 21 TLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGIPV 100 (252)
T ss_pred eEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCCcE
Confidence 47999999999 4444 22221 22222222222 112233345589999999999999999
Q ss_pred EEEcCCCcH--HHHHHHHHHcCCC--CC-Ccc----------------------e-eecCCCCHHHHHHHHHHcCCCCCc
Q psy8912 75 AAASRTSEI--LHAKQILNLINLN--QY-FSN----------------------K-EIYPGQKTTHFESLKKATGIEYKD 126 (538)
Q Consensus 75 aIvTn~~~p--~~~~~~L~~lgL~--~~-Fd~----------------------i-e~~~~~Kp~~f~~ale~lgi~P~e 126 (538)
..+|..+.. .+....|+.+|++ .- |.. + -..+..|..++...+.+.|..|+.
T Consensus 101 ~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~pk~ 180 (252)
T PF11019_consen 101 IALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQSPKK 180 (252)
T ss_pred EEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCCCCe
Confidence 999998642 4455566667763 11 110 0 001224668899999999999999
Q ss_pred EEEEeCCcccHHHH----hhcCCeEEEECCCC
Q psy8912 127 MVFFDDEERNSHDV----SPLGVTCIHSWLMM 154 (538)
Q Consensus 127 ~L~IGDs~~DI~aA----k~aG~~tI~V~~G~ 154 (538)
++||+|+..++... ++.|+..+++.+..
T Consensus 181 IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 181 IIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred EEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 99999998776544 44699988887654
No 275
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.47 E-value=0.00054 Score=69.45 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=75.3
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHHhhcCCc---------ccc----------------cccee
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLFNWN---------QHF----------------DHKEI 472 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L~~lgL~---------~yF----------------d~~~i 472 (538)
.....-+.+.++++.|+++|+++-..|+.... .+...-|+.+||. .+| +++-.
T Consensus 78 ~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 78 KMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred ceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE
Confidence 33445689999999999999997777766532 2455568888874 111 01111
Q ss_pred ec-CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHc----ccCCEEEEECCC
Q psy8912 473 FP-GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS----PLGVTCIHVKDG 521 (538)
Q Consensus 473 ~~-~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk----~aGi~~i~V~dg 521 (538)
.. .+|...+...+.++|..|+.+|||||+..++.+.. +.|+.++++.+.
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 11 16888899999999999999999999999976554 489999999875
No 276
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.45 E-value=0.00022 Score=70.81 Aligned_cols=55 Identities=20% Similarity=0.118 Sum_probs=44.8
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
+|+||+||||+. .-...|.+.++|++|+++|++++++|+++. ..+...++.+|+.
T Consensus 1 li~~DlDGTLl~-----------------------~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~-~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLP-----------------------PGYEPGPAREALEELKDLGFPIVFVSSKTR-AEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcC-----------------------CCCCchHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCC
Confidence 489999999986 123456799999999999999999999977 6666677777754
No 277
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.45 E-value=0.00022 Score=74.56 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=52.9
Q ss_pred cCCCCHHHHHHHHHHc--------CC-----CCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCE
Q psy8912 105 YPGQKTTHFESLKKAT--------GI-----EYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDM 170 (538)
Q Consensus 105 ~~~~Kp~~f~~ale~l--------gi-----~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~ 170 (538)
.+++.|.+|..+++.+ ++ ++++++||||+. .||.+|+++|+.+++|.+|....... .....|++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~--~~~~~p~~ 308 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDD--LKECKPTL 308 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCC--CCCCCCCE
Confidence 3555668899988877 43 457999999997 79999999999999999986554321 23345888
Q ss_pred EEeCCc
Q psy8912 171 IYFDDE 176 (538)
Q Consensus 171 Ii~d~~ 176 (538)
++.+..
T Consensus 309 vv~~l~ 314 (321)
T TIGR01456 309 IVNDVF 314 (321)
T ss_pred EECCHH
Confidence 887644
No 278
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.43 E-value=5.7e-05 Score=70.30 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=62.4
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC-ccccccceeecC---CchHHHHHHHHHhCCCCC
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW-NQHFDHKEIFPG---QKTTHFANLKKATGIEYK 493 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL-~~yFd~~~i~~~---~k~~~~~kal~~lgi~pe 493 (538)
.+..+.+.||+.+||++|.+. +.++|.|++. +.+++.+++.+.- ..+|+..-.... .+.. +.|-++.+|-+++
T Consensus 31 ~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~-~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~-~~KdL~~l~~~~~ 107 (159)
T PF03031_consen 31 GGYYVKLRPGLDEFLEELSKH-YEVVIWTSAS-EEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS-YIKDLSKLGRDLD 107 (159)
T ss_dssp EEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS--HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE-EE--GGGSSS-GG
T ss_pred cceeEeeCchHHHHHHHHHHh-ceEEEEEeeh-hhhhhHHHHhhhhhccccccccccccccccccc-cccchHHHhhccc
Confidence 444578899999999999655 9999999986 5699999999997 567873221111 1111 2366677788899
Q ss_pred cEEEEecccccHHhHcccCCEEEE
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIH 517 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~ 517 (538)
++|+|||+......-...++.+-.
T Consensus 108 ~vvivDD~~~~~~~~~~N~i~v~~ 131 (159)
T PF03031_consen 108 NVVIVDDSPRKWALQPDNGIPVPP 131 (159)
T ss_dssp GEEEEES-GGGGTTSGGGEEE---
T ss_pred cEEEEeCCHHHeeccCCceEEecc
Confidence 999999999875544555554443
No 279
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.40 E-value=0.00082 Score=67.31 Aligned_cols=197 Identities=19% Similarity=0.271 Sum_probs=103.1
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc-----------ccccCcc---
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY-----------KEIFPAE--- 366 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--- 366 (538)
-|=+|||.+ +-+...+.+.+|+++|+.+++||=.+. ..+..++..+++..++++ ++||...
T Consensus 4 ~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~-~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~ 82 (256)
T TIGR00099 4 IDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPY-KEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDL 82 (256)
T ss_pred EeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCH
Confidence 366777775 445677889999999999999986653 456778889998754432 2233221
Q ss_pred hhhhhhhhcccCcCCCccceEEeecCC-CCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEE
Q psy8912 367 KKIKHFANLKKDSKIKYKDMVFFDDEE-RNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAA 445 (538)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~Dldh-~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIA 445 (538)
..++.+-.+-+..++ .+.++..+. +-.+..+++. ......+... .+.+.+ +..+...-++..+.
T Consensus 83 ~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 147 (256)
T TIGR00099 83 DLVEEILNFLKKHGL---DVILYGDDSIYASKNDPEYF--------TIFKKFLGEP---KLEVVD-IQYLPDDILKILLL 147 (256)
T ss_pred HHHHHHHHHHHHcCc---EEEEEeCCeEEecCCCcchh--------HHHHHhccCC---cceecc-chhhhcccceEEEE
Confidence 112222111111121 234444441 1000001111 0001111100 001111 11222233554445
Q ss_pred eCCCchHHHHHHHhhcC---Ccccc-------ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 446 SRTTEMLRAHQLVDLFN---WNQHF-------DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 446 Sss~~~~~a~~~L~~lg---L~~yF-------d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
.... . ....+.+.+. ....+ .+.++.+. +|..-+..+++.+|++++++++|||+.+|+...+.+|+
T Consensus 148 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~ 225 (256)
T TIGR00099 148 FLDP-E-DLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGY 225 (256)
T ss_pred ECCH-H-HHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCc
Confidence 4432 2 2232322222 11111 12344443 68888999999999999999999999999999999998
Q ss_pred EEEEECC
Q psy8912 514 TCIHVKD 520 (538)
Q Consensus 514 ~~i~V~d 520 (538)
.+ ++.+
T Consensus 226 ~~-a~~n 231 (256)
T TIGR00099 226 GV-AMGN 231 (256)
T ss_pred ee-EecC
Confidence 64 4444
No 280
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.35 E-value=0.00036 Score=71.92 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=51.1
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+|+|++||||||.+. ....++.+.+.|++|+++|++++++|+++. ..+..+.+.+++
T Consensus 1 ~KLIftDLDGTLLd~----------------------~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~-~ev~~l~~~Lgl 57 (302)
T PRK12702 1 MRLVLSSLDGSLLDL----------------------EFNSYGAARQALAALERRSIPLVLYSLRTR-AQLEHLCRQLRL 57 (302)
T ss_pred CcEEEEeCCCCCcCC----------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHhCC
Confidence 478999999999862 223556689999999999999999999988 888889999998
Q ss_pred CCCC
Q psy8912 96 NQYF 99 (538)
Q Consensus 96 ~~~F 99 (538)
..+|
T Consensus 58 ~~p~ 61 (302)
T PRK12702 58 EHPF 61 (302)
T ss_pred CCeE
Confidence 6543
No 281
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.34 E-value=0.00042 Score=70.33 Aligned_cols=57 Identities=21% Similarity=0.219 Sum_probs=47.0
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
+++|++|+||||+.. .-.+.+...+.|++|+++|++++++|+++. ..+...++.+++
T Consensus 7 ~~lI~~DlDGTLL~~----------------------~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~ 63 (271)
T PRK03669 7 PLLIFTDLDGTLLDS----------------------HTYDWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGL 63 (271)
T ss_pred CeEEEEeCccCCcCC----------------------CCcCcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCC
Confidence 799999999999861 123446688999999999999999999988 777777777775
No 282
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.31 E-value=0.0022 Score=58.37 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=79.8
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFF 130 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~I 130 (538)
.....+|+.+.+.+++|++. +.++|+|+-.. ......++-.|++.+ .++....|..=..+++.++-+.+.|++|
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~-gsl~~lae~~gi~~~----rv~a~a~~e~K~~ii~eLkk~~~k~vmV 99 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRK-GSLVQLAEFVGIPVE----RVFAGADPEMKAKIIRELKKRYEKVVMV 99 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcc-hHHHHHHHHcCCcee----eeecccCHHHHHHHHHHhcCCCcEEEEe
Confidence 34678999999999999999 99999999877 888888888886532 2334567778788888888878999999
Q ss_pred eCCcccHHHHhhcCCeEEEECCC
Q psy8912 131 DDEERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 131 GDs~~DI~aAk~aG~~tI~V~~G 153 (538)
||..+|+.+-+++....+.+..+
T Consensus 100 GnGaND~laLr~ADlGI~tiq~e 122 (152)
T COG4087 100 GNGANDILALREADLGICTIQQE 122 (152)
T ss_pred cCCcchHHHhhhcccceEEeccC
Confidence 99999999999997776666543
No 283
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.24 E-value=0.0004 Score=72.58 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=63.7
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC----CceEEEEcCCCc---HHHHHHHH
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSE---ILHAKQIL 90 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~----GikiaIvTn~~~---p~~~~~~L 90 (538)
+|+||+|||||. ...++|++.++++.|+.+ |+++.++||+.. ...++.+.
T Consensus 2 ~~ifD~DGvL~~-----------------------g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~ 58 (321)
T TIGR01456 2 GFAFDIDGVLFR-----------------------GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEIS 58 (321)
T ss_pred EEEEeCcCceEC-----------------------CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHH
Confidence 689999999997 456799999999999998 999999999873 12334444
Q ss_pred HHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 91 NLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 91 ~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
+.+|+.--.+. +.... ......+++++ ..+++||.+. -...++..|+..+
T Consensus 59 ~~lG~~~~~~~--i~~s~--~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~v 108 (321)
T TIGR01456 59 SLLGVDVSPLQ--VIQSH--SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNV 108 (321)
T ss_pred HHcCCCCCHHH--HHhhh--HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCccc
Confidence 77776321111 11111 12233334432 2577787654 3455556776543
No 284
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.0032 Score=64.38 Aligned_cols=196 Identities=14% Similarity=0.147 Sum_probs=118.5
Q ss_pred ccccccccc---ccccchHHHHHHhhhcCcceeeecccccc--c-hhhhHHhhhCCCcccccccccCcchhhhhhhhccc
Q psy8912 304 VEDAKGTLL---NLYRDIPEIVKYLKDHNIKLALASRTVHI--R-NAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKK 377 (538)
Q Consensus 304 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (538)
+-|=.|+|- .++|++.+.|+.|+++|++..+.|-+++. + .+.+|..+.++.- -..+|+.|.-=+.||-+=+.
T Consensus 12 l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~--~~~~i~TS~~at~~~l~~~~ 89 (269)
T COG0647 12 LFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDV--TPDDIVTSGDATADYLAKQK 89 (269)
T ss_pred EEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCC--CHHHeecHHHHHHHHHHhhC
Confidence 457778775 58999999999999999999999877654 3 3444444355422 24678888656766654332
Q ss_pred CcCCCccceEEeecC----------CCCcCCCCC----CcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEE
Q psy8912 378 DSKIKYKDMVFFDDE----------ERNARSISK----LGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVA 443 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld----------h~~~s~~~p----~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikla 443 (538)
+. +.+.++=-+ ....++..| +=++| -.+..-|....+.+..+.+ | ..-
T Consensus 90 ~~----~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g------------~d~~~~~e~l~~a~~~i~~-g-~~f 151 (269)
T COG0647 90 PG----KKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVG------------LDRTLTYEKLAEALLAIAA-G-APF 151 (269)
T ss_pred CC----CEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEe------------cCCCCCHHHHHHHHHHHHc-C-CcE
Confidence 22 455555333 011111111 11111 1111122334555555544 4 566
Q ss_pred EEeCCCchHH------------HHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc-cccHHhHcc
Q psy8912 444 AASRTTEMLR------------AHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSP 510 (538)
Q Consensus 444 IASss~~~~~------------a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs-~~~I~aAk~ 510 (538)
|+|+-+.- + ...+++..+=.+. .+...+.+..|..++++++.++++|++|||+ ..||.+|++
T Consensus 152 I~tNpD~~-~p~~~g~~pgaGai~~~~~~~tg~~~----~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~ 226 (269)
T COG0647 152 IATNPDLT-VPTERGLRPGAGAIAALLEQATGREP----TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKA 226 (269)
T ss_pred EEeCCCcc-ccCCCCCccCcHHHHHHHHHhhCCcc----cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHH
Confidence 77743311 1 1112222111111 1233345666999999999999999999999 578999999
Q ss_pred cCCEEEEECCCCCH
Q psy8912 511 LGVTCIHVKDGMSH 524 (538)
Q Consensus 511 aGi~~i~V~dg~t~ 524 (538)
+|+.++.|.-|.+.
T Consensus 227 ~G~~t~LV~TGv~~ 240 (269)
T COG0647 227 AGLDTLLVLTGVSS 240 (269)
T ss_pred cCCCEEEEccCCCC
Confidence 99999999999883
No 285
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.22 E-value=0.0019 Score=63.55 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=68.3
Q ss_pred CCccCCCHHHHHH-HHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc--cc--eeec--------CCchHHHHHHHHH
Q psy8912 421 IIKYYRDVPAILK-YLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD--HK--EIFP--------GQKTTHFANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~-~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd--~~--~i~~--------~~k~~~~~kal~~ 487 (538)
...++||+.++|+ .++++|++++|+|++.+. .++++.+.+++..-.+ +. +... +...+...++.+.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~-~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~ 170 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQP-LVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQK 170 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHH-HHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHH
Confidence 3568999999995 789999999999999865 8888888865532222 11 1101 1112233444445
Q ss_pred hCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 488 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 488 lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
++.+...+.+.+||.+|+.--..+|-.++-=|+
T Consensus 171 ~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 171 IGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred hCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 566777889999999999888888877655444
No 286
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.20 E-value=0.0017 Score=64.78 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCceEEEeCCCCCChhhHh---hhh--chh-HHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH---HH
Q psy8912 15 FPKMVVFDLDYTLWPLHVH---DLV--APF-KKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LH 85 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~---~~i--~~~-~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---~~ 85 (538)
+.++|+.|+|-|+.+..-. ... .+| .+.|...++ .....+.||+.++++..-++|..|..+||..+. ..
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~--a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQ--AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHh--hcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 3469999999999543311 111 333 233333333 335689999999999999999999999999762 23
Q ss_pred HHHHHHHcCCCCCCcceeecC---CCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcC
Q psy8912 86 AKQILNLINLNQYFSNKEIYP---GQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLG 144 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~---~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG 144 (538)
....|...|+...-..--.+. ++|...+..+-+-+ .-+++|||...|.......+
T Consensus 156 T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d~~~k~ 213 (274)
T COG2503 156 TIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----KIVMLVGDNLDDFGDNAYKK 213 (274)
T ss_pred hHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhcc----ceeeEecCchhhhcchhhhh
Confidence 456677788765443221222 22334455555534 44889999998865544433
No 287
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.20 E-value=0.0021 Score=76.33 Aligned_cols=113 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--------CCcc-----------------eeecCCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSN-----------------KEIYPGQK 109 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--------~Fd~-----------------ie~~~~~K 109 (538)
++.|++.+.++.|+++|+++.++|+... ..+..+.+.+|+.. .++. ..++.+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 4689999999999999999999999877 89999999999853 1221 01333344
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 110 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 110 p~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
|+.=..+++.++-..+.+.|+||+.+|+.|.++|++. |.+..| .+.. ...+|+++.++.
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g--~~~a-----k~aAD~vl~dd~ 674 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG--TEVA-----KEASDMVLADDN 674 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC--cHHH-----HHhcCeEEccCC
Confidence 5444555566665677899999999999999999994 344333 2221 235788887743
No 288
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.17 E-value=0.0035 Score=62.24 Aligned_cols=54 Identities=24% Similarity=0.207 Sum_probs=42.4
Q ss_pred ccccccccc---cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc
Q psy8912 305 EDAKGTLLN---LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY 359 (538)
Q Consensus 305 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (538)
-|=+|||.+ ..|...+.+.+|+++|+++.+||-.+.. .+..+++.||+.+.|.+
T Consensus 4 ~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~-~~~~~~~~lg~~~~~I~ 60 (225)
T TIGR02461 4 TDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRA-EQEYYREELGVEPPFIV 60 (225)
T ss_pred EeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCCCCcEEE
Confidence 466788875 6677889999999999999999744433 46779999999776654
No 289
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=97.15 E-value=0.0018 Score=64.91 Aligned_cols=101 Identities=16% Similarity=0.287 Sum_probs=76.0
Q ss_pred CCCccCCCHHHHHHHH--HHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC----------------------
Q psy8912 420 AIIKYYRDVPAILKYL--KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG---------------------- 475 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~L--k~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~---------------------- 475 (538)
..+++-||+.++++.+ ++.|+.+.|+|-++.- .++.+|++.||.+.|+ .|++.
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~-fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSF-FIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHh-HHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCccCCCCCc
Confidence 4578999999999999 5689999999999865 8999999999999886 12111
Q ss_pred -----CchHHHHHHHHH---hCCCCCcEEEEecccccHHhHcccCC-EEEEECCCCC
Q psy8912 476 -----QKTTHFANLKKA---TGIEYKDMVFFDDEERNSHDVSPLGV-TCIHVKDGMS 523 (538)
Q Consensus 476 -----~k~~~~~kal~~---lgi~pee~l~~eDs~~~I~aAk~aGi-~~i~V~dg~t 523 (538)
.|...+.+.++. -|+.++.++||||..+|+..+.+.+- .++...-|+.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~ 201 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYP 201 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCCh
Confidence 133334444444 37899999999999999999988554 3444444543
No 290
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.10 E-value=0.0012 Score=63.24 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=69.7
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--------------CchH
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--------------QKTT 479 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--------------~k~~ 479 (538)
+...--..+.+-||.+++.+|.++++++..|+||...+ .+.++++.++=.+-.+...|++. .+..
T Consensus 64 ile~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~-fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds 142 (220)
T COG4359 64 ILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDP-FIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDS 142 (220)
T ss_pred HHHHHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCch-HHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCcc
Confidence 34444445889999999999999999999999999877 88999998873322222222111 0111
Q ss_pred HH----HHHHHHhCCCCCcEEEEecccccHHhHcccC
Q psy8912 480 HF----ANLKKATGIEYKDMVFFDDEERNSHDVSPLG 512 (538)
Q Consensus 480 ~~----~kal~~lgi~pee~l~~eDs~~~I~aAk~aG 512 (538)
+| -+.++++.-+++.++|+||+..|+.||+..-
T Consensus 143 ~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 143 QFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred ccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 11 3445566778889999999999999999744
No 291
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.08 E-value=0.00092 Score=67.14 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=36.4
Q ss_pred CchHHHHHHHHHhCCC--CCcEEEEecccccHHhHcccCCEEE
Q psy8912 476 QKTTHFANLKKATGIE--YKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~--pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+|...+.++++.+|++ ++++++|||+.+|+...+.+|..++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~va 218 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVV 218 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEE
Confidence 6777789999999999 9999999999999999998886553
No 292
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.06 E-value=0.0036 Score=57.05 Aligned_cols=93 Identities=13% Similarity=0.175 Sum_probs=75.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
=+||+.|.+++++|++. +.+.|||.-. .-...+.++-.|+.-+ -+..+.++..=.++++.|+-+.+-|++|||.
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr-~gsl~~lae~~gi~~~----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnG 102 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDR-KGSLVQLAEFVGIPVE----RVFAGADPEMKAKIIRELKKRYEKVVMVGNG 102 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCc-chHHHHHHHHcCCcee----eeecccCHHHHHHHHHHhcCCCcEEEEecCC
Confidence 36999999999999999 9999999764 4467778888886543 2344466666788889999999999999999
Q ss_pred cccHHhHcccCCEEEEECC
Q psy8912 502 ERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~d 520 (538)
.||+.+-++|-+-++-+.+
T Consensus 103 aND~laLr~ADlGI~tiq~ 121 (152)
T COG4087 103 ANDILALREADLGICTIQQ 121 (152)
T ss_pred cchHHHhhhcccceEEecc
Confidence 9999999998777666654
No 293
>PTZ00174 phosphomannomutase; Provisional
Probab=97.05 E-value=0.001 Score=66.71 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=38.7
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
+|+|+||+||||... .-++-|...++|++|+++|++++++|+++.
T Consensus 5 ~klia~DlDGTLL~~----------------------~~~is~~~~~ai~~l~~~Gi~~viaTGR~~ 49 (247)
T PTZ00174 5 KTILLFDVDGTLTKP----------------------RNPITQEMKDTLAKLKSKGFKIGVVGGSDY 49 (247)
T ss_pred CeEEEEECcCCCcCC----------------------CCCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 799999999999861 234566789999999999999999999866
No 294
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.04 E-value=0.0016 Score=59.35 Aligned_cols=50 Identities=26% Similarity=0.131 Sum_probs=38.3
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
|+|+||+||||....-.. .....+.+++.+.|+.|+++|+.++++|+.+.
T Consensus 2 K~i~~DiDGTL~~~~~~~----------------y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGD----------------YANVAPILAVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred CEEEEeCCCCcccCCCCc----------------ccccccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 799999999996410000 01145778899999999999999999999876
No 295
>KOG2630|consensus
Probab=96.98 E-value=0.0037 Score=61.87 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=75.9
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-C-------CCCCCcceeecCCC-CHHHHHHHHHHcC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPGQ-KTTHFESLKKATG 121 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-g-------L~~~Fd~ie~~~~~-Kp~~f~~ale~lg 121 (538)
.-...+|+++..+++..++.|++++|.|+.+. . ++.++-.+ + +..|||. -.+.+ ....|..+.+..|
T Consensus 119 ~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv-~-AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig 194 (254)
T KOG2630|consen 119 ELKAHVYADVLPAIERWSGEGVRVYIYSSGSV-A-AQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIG 194 (254)
T ss_pred cccccccchhHHHHHHHhhcCceEEEEcCCcH-H-HHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhC
Confidence 33447999999999999999999999999966 3 33433322 1 2346665 23332 3478999999999
Q ss_pred CCCCcEEEEeCCcccHHHHhhcCCeEEEEC
Q psy8912 122 IEYKDMVFFDDEERNSHDVSPLGVTCIHSW 151 (538)
Q Consensus 122 i~P~e~L~IGDs~~DI~aAk~aG~~tI~V~ 151 (538)
.+|.+++|.-|-+....+|+.+|+.+..+.
T Consensus 195 ~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~ 224 (254)
T KOG2630|consen 195 KSPREILFLTDVPREAAAARKAGLQAGLVS 224 (254)
T ss_pred CChhheEEeccChHHHHHHHhcccceeeee
Confidence 999999999999999999999999887664
No 296
>KOG2961|consensus
Probab=96.92 E-value=0.0045 Score=57.71 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=76.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-C-ceEEEEcCCCcH-------HH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-K-CLVAAASRTSEI-------LH 85 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-G-ikiaIvTn~~~p-------~~ 85 (538)
-+|+|+||-|+|+.- .......|.-..-++++++. | ..++++||+-.- ..
T Consensus 42 ~ikavVlDKDNcit~---------------------P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~ 100 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITA---------------------PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSK 100 (190)
T ss_pred CceEEEEcCCCeeeC---------------------CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHH
Confidence 489999999999932 12334455555667777764 4 778999986320 33
Q ss_pred HHHHHHHcCCCCCCcceeecCCCCHHHHHHHHH-HcC----CCCCcEEEEeCCc-ccHHHHhhcCCeEEEECCCCCc
Q psy8912 86 AKQILNLINLNQYFSNKEIYPGQKTTHFESLKK-ATG----IEYKDMVFFDDEE-RNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 86 ~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale-~lg----i~P~e~L~IGDs~-~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
+...-++.|+.-. --...||..-.+..+ .+| ..+++++||||+. .||..|...|.-.+|...|...
T Consensus 101 Ak~le~k~gIpVl-----RHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 101 AKALEAKIGIPVL-----RHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA 172 (190)
T ss_pred HHHHHHhhCCceE-----eecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence 4444455564311 123356633333332 233 5789999999996 5999999999999999988653
No 297
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.92 E-value=0.0026 Score=62.22 Aligned_cols=64 Identities=13% Similarity=-0.018 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCC----CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 84 LHAKQILNLINLN----QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 84 ~~~~~~L~~lgL~----~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
......+...++. .+|..+...+..|+.....+++.+|+++++|++|||+.+|+.+.+.+|...
T Consensus 151 ~~~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 151 PRFTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 4445566666654 344332222335888899999999999999999999999999999999764
No 298
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.90 E-value=0.01 Score=59.60 Aligned_cols=59 Identities=25% Similarity=0.327 Sum_probs=42.7
Q ss_pred ccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccC
Q psy8912 305 EDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFP 364 (538)
Q Consensus 305 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 364 (538)
.|=+|||.+ .-+...+.++.|+++|++.++||-.+. ..+..++..+++..++++ ..||-
T Consensus 4 ~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~-~~~~~~~~~~~~~~~~I~~NGa~i~~ 69 (256)
T TIGR01486 4 TDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTA-AEVEYLRKELGLEDPFIVENGGAIYG 69 (256)
T ss_pred EcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCCcEEEcCCeEEEe
Confidence 355677665 344578899999999999999984443 456889999998765554 35554
No 299
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.90 E-value=0.0039 Score=71.38 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=77.2
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.|++.+.+++|++.|+++.++|+... ..+..+.+.+|++++|.. ..|..|-...+...+ ....+.|+||+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~-~ta~~iA~~lGI~~v~a~--~~PedK~~~v~~lq~----~g~~VamvGDG~ 518 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNR-LTAAAIAAEAGVDDFIAE--ATPEDKIALIRQEQA----EGKLVAMTGDGT 518 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCEEEcC--CCHHHHHHHHHHHHH----cCCeEEEECCCc
Confidence 5669999999999999999999999977 999999999999765543 223333344444332 334699999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+|..+-+++++. +.+..|. .... +.+|++.-|+
T Consensus 519 NDapAL~~AdvG-iAm~~gt--~~ak-----eaadivLldd 551 (675)
T TIGR01497 519 NDAPALAQADVG-VAMNSGT--QAAK-----EAANMVDLDS 551 (675)
T ss_pred chHHHHHhCCEe-EEeCCCC--HHHH-----HhCCEEECCC
Confidence 999999999886 4455443 2221 2357777664
No 300
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.89 E-value=0.0042 Score=71.12 Aligned_cols=107 Identities=13% Similarity=0.114 Sum_probs=79.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.|++.+.+++||+.|+++.++|+-+. ..+..+.+.+|+.++|.. ..|+-=..+.+.++-.-+-+.|+||+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGI~~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv 513 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNE-LTAATIAKEAGVDRFVAE------CKPEDKINVIREEQAKGHIVAMTGDGT 513 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCceEEcC------CCHHHHHHHHHHHHhCCCEEEEECCCh
Confidence 5679999999999999999999999977 999999999999765543 456443333344443445688999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
||..|-+++.+. +.+..|.+ .. .+.+|+|.-|+.
T Consensus 514 NDAPALa~ADVG-IAMgsGTd--vA-----keAADiVLldd~ 547 (673)
T PRK14010 514 NDAPALAEANVG-LAMNSGTM--SA-----KEAANLIDLDSN 547 (673)
T ss_pred hhHHHHHhCCEE-EEeCCCCH--HH-----HHhCCEEEcCCC
Confidence 999999999884 55655542 22 234688887643
No 301
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.89 E-value=0.0032 Score=63.66 Aligned_cols=199 Identities=16% Similarity=0.196 Sum_probs=104.1
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCccccc---ccccCcchhh-------
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDY---KEIFPAEKKI------- 369 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------- 369 (538)
+-|=+|||++ +-|...+.+++|+++|+..++||=-+.. .++.+++.+++..++++ ..||-...++
T Consensus 6 ~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~-~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~ 84 (272)
T PRK15126 6 AFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVL-EMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLP 84 (272)
T ss_pred EEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHH-HHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCC
Confidence 4577888875 6677889999999999999999865544 46789999999876553 2344211111
Q ss_pred -hhhhhcccC-cCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCC-ceEEEEe
Q psy8912 370 -KHFANLKKD-SKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNN-CLVAAAS 446 (538)
Q Consensus 370 -~~~~~~~~~-~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~G-iklaIAS 446 (538)
+-.+.|-+- ..... .+.++.-|..-...-.+.. . . . ....+..... ....+ +.... +++.+..
T Consensus 85 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~----~-~--~~~~~~~~~~-~~~~~----~~~~~~~ki~~~~ 150 (272)
T PRK15126 85 ADVAELVLHQQWDTRA-SMHVFNDDGWFTGKEIPAL-L----Q-A--HVYSGFRYQL-IDLKR----LPAHGVTKICFCG 150 (272)
T ss_pred HHHHHHHHHHhhhcCc-EEEEEcCCeEEecCCcHHH-H----H-H--HHhcCCceEE-ecHHH----ccccCceEEEEEC
Confidence 111111110 01111 2334433311000000100 0 0 0 0000100100 11111 11122 3444433
Q ss_pred CCCchHHHHH---HH-hhcC--Ccccc---ccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 447 RTTEMLRAHQ---LV-DLFN--WNQHF---DHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 447 ss~~~~~a~~---~L-~~lg--L~~yF---d~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.. . .... .+ +.++ +.-.+ .+.++.+. +|..-+..+++.+|+++++++.|||+.||++.-+.+|. .
T Consensus 151 -~~-~-~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~ 226 (272)
T PRK15126 151 -DH-D-DLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-G 226 (272)
T ss_pred -CH-H-HHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-c
Confidence 21 1 2222 22 2222 11000 12344443 68888999999999999999999999999999999996 5
Q ss_pred EEECCC
Q psy8912 516 IHVKDG 521 (538)
Q Consensus 516 i~V~dg 521 (538)
+++.++
T Consensus 227 vAm~Na 232 (272)
T PRK15126 227 FIMGNA 232 (272)
T ss_pred eeccCC
Confidence 566653
No 302
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.88 E-value=0.0049 Score=70.69 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=78.3
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
.+.||+.+.+++||+.|+++.++|+-+. ..+..+.+.+|++++|.. ..|+-=..+.++++-.-+-+.|+||+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGId~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFLAE------ATPEDKLALIRQEQAEGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcEEEcc------CCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4569999999999999999999999977 999999999999765443 455433333333333345589999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+|..|-+++.+. +.+..|.+ . ..+.+|+|.-|+.
T Consensus 518 NDAPALa~ADVG-IAMgsGTd--v-----AkeAADiVLldd~ 551 (679)
T PRK01122 518 NDAPALAQADVG-VAMNSGTQ--A-----AKEAGNMVDLDSN 551 (679)
T ss_pred chHHHHHhCCEe-EEeCCCCH--H-----HHHhCCEEEeCCC
Confidence 999999999874 44655542 2 1235688887643
No 303
>PRK10976 putative hydrolase; Provisional
Probab=96.86 E-value=0.0092 Score=60.00 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=42.4
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++.+|++++++++|||+.||++.-+.+|. .+++.++
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~-~vAm~NA 234 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGK-GCIMGNA 234 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCC-CeeecCC
Confidence 45443 68888999999999999999999999999999999997 4566654
No 304
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.77 E-value=0.0023 Score=60.34 Aligned_cols=93 Identities=9% Similarity=0.121 Sum_probs=60.8
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCC---Cc----h------HHHHHHHhhcCCccccc-cce--eecCCchHHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRT---TE----M------LRAHQLVDLFNWNQHFD-HKE--IFPGQKTTHFANLKKA 487 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss---~~----~------~~a~~~L~~lgL~~yFd-~~~--i~~~~k~~~~~kal~~ 487 (538)
+.|+|.+.|++|.+.||++.|+|+- .. . ...+.+++.+++.-++- ... .+..+.+.++..+++.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~ 109 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKD 109 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCC
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHh
Confidence 4568999999999999999999953 11 1 24566778887762211 001 1112456778988888
Q ss_pred hC----CCCCcEEEEecc-----------cccHHhHcccCCEEE
Q psy8912 488 TG----IEYKDMVFFDDE-----------ERNSHDVSPLGVTCI 516 (538)
Q Consensus 488 lg----i~pee~l~~eDs-----------~~~I~aAk~aGi~~i 516 (538)
++ ++.++++||||+ ..|.+=|.+.|++..
T Consensus 110 ~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 110 YNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred ccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 76 599999999997 567888888998763
No 305
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=96.76 E-value=0.0016 Score=62.09 Aligned_cols=130 Identities=11% Similarity=0.117 Sum_probs=77.7
Q ss_pred CceEEEeCCCCCChh---h--Hhhhh-chhHHHH--HHHHhh----hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH
Q psy8912 16 PKMVVFDLDYTLWPL---H--VHDLV-APFKKIG--QKVMDA----KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 83 (538)
Q Consensus 16 iKaVIFDlDGTLw~~---~--~~~~i-~~~~~~~--~~i~~~----~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p 83 (538)
+=+|-||+|.|++-+ + ..+.+ |+-.... ..+.+. +....-|-.-+++++..-.++|=.++.+|+.+.
T Consensus 63 Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~- 141 (237)
T COG3700 63 PIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP- 141 (237)
T ss_pred CeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC-
Confidence 557999999999211 1 12222 2222222 222222 333333445577888888889999999999865
Q ss_pred HHHH----HHHHHcCCCCCCcceeecCCCCH--HHH--HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 84 LHAK----QILNLINLNQYFSNKEIYPGQKT--THF--ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 84 ~~~~----~~L~~lgL~~~Fd~ie~~~~~Kp--~~f--~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
...+ .+.+.+.+...-.. .+.+.|| .-| ...++.-++ -++.|||.+||.||+++|++.|-+..
T Consensus 142 gk~d~vsk~Lak~F~i~~m~pv--~f~Gdk~k~~qy~Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 142 GKTDTVSKTLAKNFHITNMNPV--IFAGDKPKPGQYTKTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred CcccccchhHHhhcccCCCcce--eeccCCCCcccccccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEEe
Confidence 3222 23334455433332 3444444 333 233444454 78999999999999999999887754
No 306
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.76 E-value=0.0037 Score=63.86 Aligned_cols=68 Identities=32% Similarity=0.418 Sum_probs=57.9
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
.+..|+||+|.||.... ...--..|.+.+.|.+|++.|..+++-|.+++ +.+...++.++
T Consensus 121 ~phVIVfDlD~TLItd~-------------------~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~-eHV~~sl~~~~ 180 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDE-------------------GDVRIRDPAVYDSLRELKEQGCVLVLWSYGNR-EHVRHSLKELK 180 (297)
T ss_pred CCcEEEEECCCcccccC-------------------CccccCChHHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHhC
Confidence 47899999999997521 11112568899999999999999999999999 99999999999
Q ss_pred CCCCCcce
Q psy8912 95 LNQYFSNK 102 (538)
Q Consensus 95 L~~~Fd~i 102 (538)
+.++|+.+
T Consensus 181 L~~~Fd~i 188 (297)
T PF05152_consen 181 LEGYFDII 188 (297)
T ss_pred CccccEEE
Confidence 99999976
No 307
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.75 E-value=0.0036 Score=71.97 Aligned_cols=106 Identities=15% Similarity=0.177 Sum_probs=79.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEE 134 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~ 134 (538)
++.|++.+.++.||+.|+++.++|+-+. ..++.+.+.+|+++++.. ..|..|.+..+++-+ .-..+.||||+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~-~~A~~iA~~lGId~v~Ae--llPedK~~~V~~l~~----~g~~VamVGDGI 609 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNR-RTAEAIAKELGIDEVRAE--LLPEDKAEIVRELQA----EGRKVAMVGDGI 609 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcChHhhecc--CCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence 3458999999999999999999999988 999999999999877766 556666666665543 336799999999
Q ss_pred ccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 135 RNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 135 ~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
||-.+-..+.+. +.+..|.. - ..+-+|.+.-..
T Consensus 610 NDAPALA~AdVG-iAmG~GtD--v-----A~eaADvvL~~~ 642 (713)
T COG2217 610 NDAPALAAADVG-IAMGSGTD--V-----AIEAADVVLMRD 642 (713)
T ss_pred hhHHHHhhcCee-EeecCCcH--H-----HHHhCCEEEecC
Confidence 998888777663 44544432 2 223467777553
No 308
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.70 E-value=0.0082 Score=59.46 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
+|...+..+++++|+++++|++|||+.+|+...+.+|.-+ +|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~n 202 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGN 202 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence 7888899999999999999999999999999999887544 5655
No 309
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.69 E-value=0.024 Score=57.52 Aligned_cols=54 Identities=22% Similarity=0.321 Sum_probs=41.9
Q ss_pred cccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCc-ccc
Q psy8912 304 VEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSD-FFD 358 (538)
Q Consensus 304 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 358 (538)
+-|=+|||++ +.+...+.+..|+++||+.++||--+. ..+..++..|++.+ +++
T Consensus 11 ~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~~~~~~I 69 (271)
T PRK03669 11 FTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGLQGLPLI 69 (271)
T ss_pred EEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCCCCCcEE
Confidence 4578899985 456677889999999999999986654 45688999999963 443
No 310
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.68 E-value=0.0033 Score=71.43 Aligned_cols=58 Identities=26% Similarity=0.234 Sum_probs=46.3
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.|+|++|+||||.+. .-...+...+.|+.|+++|++++++|+++. ..+...++.+++
T Consensus 416 ~KLIfsDLDGTLLd~----------------------d~~i~~~t~eAL~~L~ekGI~~VIATGRs~-~~i~~l~~~Lgl 472 (694)
T PRK14502 416 KKIVYTDLDGTLLNP----------------------LTYSYSTALDALRLLKDKELPLVFCSAKTM-GEQDLYRNELGI 472 (694)
T ss_pred eeEEEEECcCCCcCC----------------------CCccCHHHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCC
Confidence 689999999999862 113445678999999999999999999988 667777777765
Q ss_pred C
Q psy8912 96 N 96 (538)
Q Consensus 96 ~ 96 (538)
.
T Consensus 473 ~ 473 (694)
T PRK14502 473 K 473 (694)
T ss_pred C
Confidence 4
No 311
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.68 E-value=0.012 Score=59.25 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=40.1
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|..-+..+++.+|++++++++|||+.||++.-+.+|. .+++.++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA 240 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNA 240 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCc
Confidence 78888999999999999999999999999999999998 5556553
No 312
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.54 E-value=0.0087 Score=71.15 Aligned_cols=99 Identities=10% Similarity=0.094 Sum_probs=74.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--------ccccc-----------------eeecC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--------HFDHK-----------------EIFPG 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--------yFd~~-----------------~i~~~ 475 (538)
+-+++||+.+.++.|++.|+++.++|..+ ++.+..+.+.+|+.. +++.. .++.+
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDN-KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCC-HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 45689999999999999999999999775 558999999999964 22210 12333
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
..|++=.++++.++-..+.+.++||+.||+.+.++|++- |++..|
T Consensus 614 ~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g 658 (917)
T TIGR01116 614 VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG 658 (917)
T ss_pred cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence 334444666667776778888999999999999999993 344333
No 313
>KOG1615|consensus
Probab=96.53 E-value=0.01 Score=57.58 Aligned_cols=97 Identities=16% Similarity=0.161 Sum_probs=72.8
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--------ccc---------c--ceeecCCch
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--------HFD---------H--KEIFPGQKT 478 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--------yFd---------~--~~i~~~~k~ 478 (538)
......+-|||+|+.+.|+++|..+.++|..-++ .+..+-..|||.. .|| . ....++.|+
T Consensus 83 ~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~-~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa 161 (227)
T KOG1615|consen 83 IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQ-LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKA 161 (227)
T ss_pred hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHH-HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccH
Confidence 3446778999999999999999999999988765 8899999999964 122 0 011223577
Q ss_pred HHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEE
Q psy8912 479 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV 518 (538)
Q Consensus 479 ~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V 518 (538)
+.+..+.+ +.....+++|||.-+|+++... |..+++.
T Consensus 162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~ 198 (227)
T KOG1615|consen 162 EVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGF 198 (227)
T ss_pred HHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhcc
Confidence 77665544 9999999999999999887665 4444443
No 314
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.35 E-value=0.016 Score=68.62 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=79.0
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--CCc-----------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~Fd-----------------~ie~~~~~Kp~~f~~ 115 (538)
++.|++.+.+++|++.|+++.++|+-.. ..+..+.+.+|+.. ... ...++.+..|+-=..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~-~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNE-IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 4568999999999999999999999877 99999999999852 110 012333445543333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
+.+.+.-.-+.+.|+||+.+|..|-++|.+. |.+..|.. ...+.+|+|.-++.-.
T Consensus 594 iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtd-------vAk~aADiVLldd~~~ 648 (867)
T TIGR01524 594 IIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAAD-------IAKEASDIILLEKSLM 648 (867)
T ss_pred HHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccH-------HHHHhCCEEEecCChH
Confidence 3333333345788999999999999999885 44554432 1223578888775433
No 315
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.29 E-value=0.016 Score=67.47 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=80.8
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-Ccc-----------------------eeecCCCCH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSN-----------------------KEIYPGQKT 110 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-Fd~-----------------------ie~~~~~Kp 110 (538)
++.|++.+.++.|++.|+++.++|+-+. ..+..+.+.+|+.+. +.. ..++.+-.|
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHL-AIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 5679999999999999999999999977 999999999999641 100 012333455
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhH
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHV 180 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~ 180 (538)
+-=..+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|. +. ..+.+|+|.-++.-..+
T Consensus 521 e~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gt--dv-----AkeaADivLl~d~l~~I 582 (755)
T TIGR01647 521 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGAT--DA-----ARSAADIVLTEPGLSVI 582 (755)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCc--HH-----HHHhCCEEEEcCChHHH
Confidence 433333343433446799999999999999999885 4455433 22 22357888877543333
No 316
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.29 E-value=0.029 Score=52.99 Aligned_cols=117 Identities=16% Similarity=0.149 Sum_probs=70.0
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHHc--
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLI-- 93 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~l-- 93 (538)
.|++|+||||..+-... .+..- ...-...||+.++...++++||++.-+|+.+.. ...+..|...
T Consensus 1 VVvsDIDGTiT~SD~~G----------~i~~~-~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q 69 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLG----------HILPI-LGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQ 69 (157)
T ss_pred CEEEeccCCcCccchhh----------hhhhc-cCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHh
Confidence 48999999996532211 11111 112267899999999999999999999998641 3334455544
Q ss_pred ---CCCC---CCc------ce--eecCCCCHHHHH-----HHHHHcCCCCCc-EEEEeCCcccHHHHhhcCCe
Q psy8912 94 ---NLNQ---YFS------NK--EIYPGQKTTHFE-----SLKKATGIEYKD-MVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 94 ---gL~~---~Fd------~i--e~~~~~Kp~~f~-----~ale~lgi~P~e-~L~IGDs~~DI~aAk~aG~~ 146 (538)
++.. ++. .. +.. .++|+.|+ .+...+.-.... ..-+|++..|+.+-+++|+.
T Consensus 70 ~~~~lP~Gpv~~sP~~l~~al~rEvi-~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 70 QGHNLPDGPVLLSPDSLFSALHREVI-SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred CCccCCCCCEEECCcchhhhhhcccc-ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3321 111 11 111 23565543 222332211222 22389999999999999996
No 317
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.16 E-value=0.018 Score=68.44 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=79.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC--C-----Cc------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--Y-----FS------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~--~-----Fd------------~ie~~~~~Kp~~f~~ 115 (538)
++-|++.+.++.|+++|+++.++|+-.. ..+..+.+.+|+.. . ++ ...++.+..|+.=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSE-LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 4568999999999999999999999977 99999999999951 0 00 002333445644333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhh
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEH 179 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~ 179 (538)
+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|. +. ..+.+|+|.-++.-..
T Consensus 629 IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gt--dv-----AkeaADiVLldd~~~~ 684 (902)
T PRK10517 629 IVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAV--DI-----AREAADIILLEKSLMV 684 (902)
T ss_pred HHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcC--HH-----HHHhCCEEEecCChHH
Confidence 3333333445688999999999999999885 4455443 21 1235788887754333
No 318
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.13 E-value=0.018 Score=56.33 Aligned_cols=112 Identities=21% Similarity=0.179 Sum_probs=72.6
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
-|++|+|+|+||+...-. ........-|++.++|+.+.+. +.++|.|.++. .+++.++..+++
T Consensus 21 kklLVLDLDeTLvh~~~~---------------~~~~~~~kRP~l~eFL~~~~~~-feIvVwTAa~~-~ya~~~l~~l~~ 83 (195)
T TIGR02245 21 KKLLVLDIDYTLFDHRSP---------------AETGEELMRPYLHEFLTSAYED-YDIVIWSATSM-KWIEIKMTELGV 83 (195)
T ss_pred CcEEEEeCCCceEccccc---------------CCCceEEeCCCHHHHHHHHHhC-CEEEEEecCCH-HHHHHHHHHhcc
Confidence 379999999999852100 0012345669999999999985 99999999988 999999999875
Q ss_pred CCC--Ccce---ee-------c--CC---CCHHHHHHHHHHcC--CCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 96 NQY--FSNK---EI-------Y--PG---QKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 96 ~~~--Fd~i---e~-------~--~~---~Kp~~f~~ale~lg--i~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
... +... +. . .+ -|+ ...+-+++| .+.+++++|+|++.....--..|+.
T Consensus 84 ~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 84 LTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred cCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 321 1100 00 0 01 122 222223454 3779999999998765444444554
No 319
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.12 E-value=0.021 Score=66.16 Aligned_cols=61 Identities=20% Similarity=0.193 Sum_probs=42.4
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhh-CCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKE-NKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~-~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
..++++||+||||.+..- ......+-+.+.+.|+.|.+ .|+.++|+|+.+. ..++..+...
T Consensus 491 ~~rLi~~D~DGTL~~~~~-----------------~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~-~~l~~~~~~~ 552 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAP-----------------DPELAVPDKELRDLLRRLAADPNTDVAIISGRDR-DTLERWFGDL 552 (726)
T ss_pred cceEEEEecCccccCCCC-----------------CcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH-HHHHHHhCCC
Confidence 468999999999976210 01123455778888899888 4889999998876 6565555433
No 320
>KOG2630|consensus
Probab=96.09 E-value=0.02 Score=56.80 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=77.1
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcC----C----ccccccceeecCCchHHHHHHHHHhCCCCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFN----W----NQHFDHKEIFPGQKTTHFANLKKATGIEYK 493 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lg----L----~~yFd~~~i~~~~k~~~~~kal~~lgi~pe 493 (538)
-.+|++|...++..+..|+++.|-||-.. .|+++|=... + ..|||. .++-..+...|.++.+.+|.+|.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv--~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~e~~sy~~I~~~Ig~s~~ 198 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSV--AAQKLLFGYSDAGDLRKYISGYFDT-TIGLKVESQSYKKIGHLIGKSPR 198 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcH--HHHHHHHcccCcchHHHHhhhhhhc-cccceehhHHHHHHHHHhCCChh
Confidence 36899999999999999999999998864 4566653222 2 346773 33333456669999999999999
Q ss_pred cEEEEecccccHHhHcccCCEEEEECC
Q psy8912 494 DMVFFDDEERNSHDVSPLGVTCIHVKD 520 (538)
Q Consensus 494 e~l~~eDs~~~I~aAk~aGi~~i~V~d 520 (538)
|++|.=|...-..+|+.+|+.+..+..
T Consensus 199 eiLfLTd~~~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 199 EILFLTDVPREAAAARKAGLQAGLVSR 225 (254)
T ss_pred heEEeccChHHHHHHHhcccceeeeec
Confidence 999999999999999999999988866
No 321
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.04 E-value=0.012 Score=67.40 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=70.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-.++||+.+.+++|++.|+++.+.|.-+ +..+..+-+.+|+.++|. ...+.+|....... ++ ....+.|+||.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~-~~ta~~iA~~lGI~~v~a--~~~PedK~~~v~~l-q~---~g~~VamvGDG 517 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDN-RLTAAAIAAEAGVDDFIA--EATPEDKIALIRQE-QA---EGKLVAMTGDG 517 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCEEEc--CCCHHHHHHHHHHH-HH---cCCeEEEECCC
Confidence 3689999999999999999999999876 458999999999988775 33333444444333 22 34579999999
Q ss_pred cccHHhHcccCCEEEEECCC
Q psy8912 502 ERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~dg 521 (538)
.||..+-++|++-+. +..|
T Consensus 518 ~NDapAL~~AdvGiA-m~~g 536 (675)
T TIGR01497 518 TNDAPALAQADVGVA-MNSG 536 (675)
T ss_pred cchHHHHHhCCEeEE-eCCC
Confidence 999999999987654 4344
No 322
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.02 E-value=0.042 Score=64.80 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=39.3
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHh-hhCCceEEEEcCCCcHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYL-KENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~L-k~~GikiaIvTn~~~p~~~~~~L 90 (538)
+.+++++|+||||.+.. .....+-|++.++|+.| ++.|..++|+|+.+. ..++..+
T Consensus 595 ~~rlI~LDyDGTLlp~~-------------------~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~-~~L~~~f 651 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA-------------------SIDKSPSSKSIDILNTLCRDKNNMVFIVSARSR-KTLADWF 651 (854)
T ss_pred cCeEEEEecCCcccCCc-------------------cccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH-HHHHHHh
Confidence 57899999999998621 01234557788888887 566888888888755 5444444
No 323
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.98 E-value=0.029 Score=54.82 Aligned_cols=114 Identities=12% Similarity=0.086 Sum_probs=71.5
Q ss_pred CccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 382 KYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 382 ~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
+-+.++|+||| |... ..+ ...+...|++.+||+++.+ .|.++|-|++. ++++..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~-~~~------------------~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~-~~ya~~~ 77 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRS-PAE------------------TGEELMRPYLHEFLTSAYE-DYDIVIWSATS-MKWIEIK 77 (195)
T ss_pred CCCcEEEEeCCCceEcccc-cCC------------------CceEEeCCCHHHHHHHHHh-CCEEEEEecCC-HHHHHHH
Confidence 44579999999 5431 001 1124578999999999999 59999999987 4699999
Q ss_pred HhhcCCccc--c------ccc---eeecC-Cc---hHHHHHHHHHhC--CCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 458 VDLFNWNQH--F------DHK---EIFPG-QK---TTHFANLKKATG--IEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 458 L~~lgL~~y--F------d~~---~i~~~-~k---~~~~~kal~~lg--i~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
++.+++... | |.- ..... .. ......+-+++| .+.+++|+|||+......-=..|+.+-
T Consensus 78 l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~ 153 (195)
T TIGR02245 78 MTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIR 153 (195)
T ss_pred HHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccC
Confidence 999886431 1 100 00000 11 111222222343 477999999999987554444555554
No 324
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.93 E-value=0.045 Score=65.37 Aligned_cols=114 Identities=13% Similarity=0.045 Sum_probs=78.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC---------Cc------------ceeecCCCCHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY---------FS------------NKEIYPGQKTTHF 113 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~---------Fd------------~ie~~~~~Kp~~f 113 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..- |+ ...++.+..|+-=
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNI-DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 5668999999999999999999999977 999999999998521 11 1123445566443
Q ss_pred HHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCCch
Q psy8912 114 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDDEQ 177 (538)
Q Consensus 114 ~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~~~ 177 (538)
..+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+. .|. +. ....+|+++.++.-
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG-IAmg~~gt--dv-----Ak~aADivL~dd~f 714 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG-FSMGISGT--EV-----AKEASDIILLDDNF 714 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc-eecCCCcc--HH-----HHHhCCEEEecCCH
Confidence 333333333345689999999999999999775 2243 332 21 22357888887543
No 325
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.87 E-value=0.03 Score=66.54 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=78.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-------Cc------------ceeecCCCCHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-------FS------------NKEIYPGQKTTHFES 115 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-------Fd------------~ie~~~~~Kp~~f~~ 115 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..- ++ ...++.+..|+-=..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNP-IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 4568999999999999999999999977 999999999998520 00 002333445644333
Q ss_pred HHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 116 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 116 ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
+.+.+.-.-+-+.|+||+.+|..|-++|.+. |.+..|.. . ..+.+|+|.-++.
T Consensus 629 iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtd--v-----AkeaADiVLldd~ 681 (903)
T PRK15122 629 VLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGAD--I-----AKESADIILLEKS 681 (903)
T ss_pred HHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccH--H-----HHHhcCEEEecCC
Confidence 3333333345689999999999999999885 55654432 2 2235788887654
No 326
>KOG3120|consensus
Probab=95.76 E-value=0.021 Score=56.48 Aligned_cols=101 Identities=14% Similarity=0.244 Sum_probs=75.3
Q ss_pred CCccCCCHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHhhcCCccccccceeecC------------------------
Q psy8912 421 IIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG------------------------ 475 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~------------------------ 475 (538)
.+++-||+.++++.+++.|. .+-|.|-++.- .++..|++.|+.+.|. .|.+.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsf-FIe~~Lea~~~~d~F~--~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSF-FIEEILEAAGIHDLFS--EIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchh-HHHHHHHHccHHHHHH--HHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 36788999999999999997 89999988765 8899999999998887 22211
Q ss_pred ----CchH---HHHHHHHHhCCCCCcEEEEecccccHHhHcc-cCCEEEEECCCCCH
Q psy8912 476 ----QKTT---HFANLKKATGIEYKDMVFFDDEERNSHDVSP-LGVTCIHVKDGMSH 524 (538)
Q Consensus 476 ----~k~~---~~~kal~~lgi~pee~l~~eDs~~~I~aAk~-aGi~~i~V~dg~t~ 524 (538)
.|.. +|..-.-+-|++++.++|+||+-+|+....+ .+.+++...-|+..
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0111 1332223358999999999999999998887 56666655556554
No 327
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.73 E-value=0.018 Score=55.85 Aligned_cols=194 Identities=23% Similarity=0.223 Sum_probs=102.0
Q ss_pred cccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cc-cCcchhhhhhhhccc
Q psy8912 306 DAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EI-FPAEKKIKHFANLKK 377 (538)
Q Consensus 306 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~ 377 (538)
|=+|||.+ +=|...+.++.|++.|+++++||=.+ +.-+..+++.+++..++++- -+ ++. .|+-|-+.|.+
T Consensus 4 DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~-~~~~~~~~~~~~~~~~~I~~nGa~i~~~~-~~~l~~~~i~~ 81 (254)
T PF08282_consen 4 DLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRS-YSSIKRLLKELGIDDYFICSNGALIDDPK-GKILYEKPIDS 81 (254)
T ss_dssp ECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSST-HHHHHHHHHHTTHCSEEEEGGGTEEEETT-TEEEEEESB-H
T ss_pred EECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCc-ccccccccccccchhhhcccccceeeecc-cccchhhheec
Confidence 55666644 34778889999999999999998443 34589999999999666542 12 111 11111111111
Q ss_pred C---------cCCCccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCc-eEE
Q psy8912 378 D---------SKIKYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNC-LVA 443 (538)
Q Consensus 378 ~---------~~~~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gi-kla 443 (538)
+ .+.+ =.+.+++.+ +.+ ... ........... ......- ........+ ++.
T Consensus 82 ~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~ki~ 145 (254)
T PF08282_consen 82 DDVKKILKYLKEHN-ISFFFYTDDDIYIYEN-----KDE------EELFFEHKFFN-FKESIVS---EDDLEDEEIFKIL 145 (254)
T ss_dssp HHHHHHHHHHHHTT-CEEEEEESSEEEESST-----TCH------HHHHHHHHHTS-CEEEESH---HHHHHCSSESEEE
T ss_pred cchhheeehhhhcc-cccccccceeeecccc-----ccc------chhhhhhcccc-ccccccc---ccccccccceeee
Confidence 1 1111 333444433 121 000 00111111111 1111111 112223333 444
Q ss_pred EEeCCCchHHHHHHH----hhcCCc-cccc----cceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccC
Q psy8912 444 AASRTTEMLRAHQLV----DLFNWN-QHFD----HKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLG 512 (538)
Q Consensus 444 IASss~~~~~a~~~L----~~lgL~-~yFd----~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aG 512 (538)
.... ++....+. +.++-. .++. +.++.+. +|..-+.++++.+|++++++++|||+.||+.-.+.+|
T Consensus 146 -~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~ 222 (254)
T PF08282_consen 146 -FFPD--PEDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAG 222 (254)
T ss_dssp -EESC--HHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSS
T ss_pred -cccc--chhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcC
Confidence 2222 22333332 222211 1111 2234443 7888899999999999999999999999999999998
Q ss_pred CEEEEECCC
Q psy8912 513 VTCIHVKDG 521 (538)
Q Consensus 513 i~~i~V~dg 521 (538)
.. ++|.++
T Consensus 223 ~~-~am~na 230 (254)
T PF08282_consen 223 YS-VAMGNA 230 (254)
T ss_dssp EE-EEETTS
T ss_pred eE-EEEcCC
Confidence 76 556553
No 328
>KOG3040|consensus
Probab=95.64 E-value=0.073 Score=52.33 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCCCcEEEEecccc-cHHhHcccCCEEEEECCC
Q psy8912 481 FANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 481 ~~kal~~lgi~pee~l~~eDs~~-~I~aAk~aGi~~i~V~dg 521 (538)
|..+++.+|++|++|++|||-.+ |+..|.+.||.-|.|.-|
T Consensus 187 Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 187 FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 78999999999999999987655 599999999999999876
No 329
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=95.48 E-value=0.069 Score=58.53 Aligned_cols=100 Identities=16% Similarity=0.246 Sum_probs=66.0
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc---------CCccccccceeecCCchHH------------
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF---------NWNQHFDHKEIFPGQKTTH------------ 480 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l---------gL~~yFd~~~i~~~~k~~~------------ 480 (538)
+..-|.+..+|+.||++|-++-++|+|+- +.+..+++.+ .+.+|||.+ |....||.-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFDvV-Iv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFDVV-IVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCECEE-EES--CCHHHCT---EEEEET
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhheeEE-EEcCCCCcccCCCCceEEEEC
Confidence 33457899999999999999999999874 4777777663 467899942 222222222
Q ss_pred ------------------------HHHHHHHhCCCCCcEEEEeccccc-HHhHcc-cCCEEEEECCCCC
Q psy8912 481 ------------------------FANLKKATGIEYKDMVFFDDEERN-SHDVSP-LGVTCIHVKDGMS 523 (538)
Q Consensus 481 ------------------------~~kal~~lgi~pee~l~~eDs~~~-I~aAk~-aGi~~i~V~dg~t 523 (538)
.....+.+|....+++||||...+ |...++ .|-.+++|-..+.
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe 328 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE 328 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence 455666689999999999999765 666666 6999999976543
No 330
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.47 E-value=0.029 Score=64.67 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=69.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
.-.++|++.+.++.||++|+++.++|.-+ +..++.+-+.+||++|+- +..|.+|.+...++. -.-..+.||||
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn-~~~A~~iA~~lGId~v~A--ellPedK~~~V~~l~----~~g~~VamVGD 607 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDN-RRTAEAIAKELGIDEVRA--ELLPEDKAEIVRELQ----AEGRKVAMVGD 607 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcChHhhec--cCCcHHHHHHHHHHH----hcCCEEEEEeC
Confidence 34589999999999999999999999766 559999999999999887 567777877765553 23367999999
Q ss_pred ccccHHhHcccCC
Q psy8912 501 EERNSHDVSPLGV 513 (538)
Q Consensus 501 s~~~I~aAk~aGi 513 (538)
..||.-+-.+|-+
T Consensus 608 GINDAPALA~AdV 620 (713)
T COG2217 608 GINDAPALAAADV 620 (713)
T ss_pred CchhHHHHhhcCe
Confidence 9999766655443
No 331
>PLN02887 hydrolase family protein
Probab=95.38 E-value=0.089 Score=59.52 Aligned_cols=50 Identities=18% Similarity=0.291 Sum_probs=42.7
Q ss_pred eeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 471 EIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 471 ~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+. +|..-+..+++.+|+++++++.|||+.||++--+.+|. .|++.++
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA 551 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNG 551 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCC
Confidence 45443 78888999999999999999999999999999999997 4666664
No 332
>PLN02423 phosphomannomutase
Probab=95.35 E-value=0.027 Score=56.69 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=31.4
Q ss_pred CCCcEEEEec----ccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 491 EYKDMVFFDD----EERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 491 ~pee~l~~eD----s~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
+++|+++||| ..||++--+.-|+.++.|++....-+|
T Consensus 199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~ 239 (245)
T PLN02423 199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQ 239 (245)
T ss_pred CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHH
Confidence 9999999999 799999999899999999985444333
No 333
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=95.31 E-value=0.024 Score=54.57 Aligned_cols=91 Identities=19% Similarity=0.256 Sum_probs=53.6
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCch------HHHHHHHh-hcCCccccccceeecCCchHHHHHHHHHhCCCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEM------LRAHQLVD-LFNWNQHFDHKEIFPGQKTTHFANLKKATGIEY 492 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~------~~a~~~L~-~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~p 492 (538)
..+.+.||+.|+|+.|.+.|+.+-+.|+.+.+ +....-|+ +|+-..+ +. .+..+.|. .++.
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~-~~-~~~~~~K~--------~v~~-- 137 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY-DN-LIFTGDKT--------LVGG-- 137 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH-CC-EEEESSGG--------GC----
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch-he-EEEecCCC--------eEec--
Confidence 36789999999999999999666655555432 12223344 3342212 21 33444442 1222
Q ss_pred CcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 493 KDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 493 ee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
+ ++|||++.++.++..+|+.++......|.
T Consensus 138 D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr 167 (191)
T PF06941_consen 138 D--VLIDDRPHNLEQFANAGIPVILFDQPYNR 167 (191)
T ss_dssp S--EEEESSSHHHSS-SSESSEEEEE--GGGT
T ss_pred c--EEecCChHHHHhccCCCceEEEEcCCCCC
Confidence 2 89999999999999999999999775444
No 334
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.25 E-value=0.097 Score=52.44 Aligned_cols=138 Identities=11% Similarity=-0.002 Sum_probs=77.6
Q ss_pred CccceEEeecCCCCcCCCCCCccc---ccccccchHhhhc--CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HH
Q psy8912 382 KYKDMVFFDDEERNARSISKLGVI---GIQVHRDKVLDAG--GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RA 454 (538)
Q Consensus 382 ~~~~l~~~Dldh~~~s~~~p~~~i---~i~~~~~~i~d~~--~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a 454 (538)
.-++++|||+|.-=+|.+|-+..- +..+.. .-.+.+ ....+..|++.++++.|+++|+++.++|.-+... .+
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~-~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDP-TAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCH-HHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 467999999994333333311110 011111 112221 3356889999999999999999999999776431 25
Q ss_pred HHHHhhcCCccccccceeec---CCc-hHHHHHHHH-HhCCC-CCcEEEEecccccHHhHcccCCEEEEECCCC
Q psy8912 455 HQLVDLFNWNQHFDHKEIFP---GQK-TTHFANLKK-ATGIE-YKDMVFFDDEERNSHDVSPLGVTCIHVKDGM 522 (538)
Q Consensus 455 ~~~L~~lgL~~yFd~~~i~~---~~k-~~~~~kal~-~lgi~-pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~ 522 (538)
..-|+..|+..+ +....-+ ..+ ...|....+ ++--+ +.=+..|||...|+... -+|..+.-.|+.+
T Consensus 154 ~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPNPm 225 (229)
T TIGR01675 154 LDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPNPM 225 (229)
T ss_pred HHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCC-CccCceeeCCCCc
Confidence 567888887654 3111111 111 111222222 11111 22256699999998554 4677777766653
No 335
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.22 E-value=0.29 Score=56.08 Aligned_cols=208 Identities=15% Similarity=0.117 Sum_probs=106.6
Q ss_pred ccccccccccccc----cccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccc---cccCcchhhhhhh
Q psy8912 301 KDRVEDAKGTLLN----LYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYK---EIFPAEKKIKHFA 373 (538)
Q Consensus 301 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 373 (538)
|=-+-|=+|||.+ .++.....+..|+++||++++||=-+.. .+..+++.|++...|++. -||-.... ..+
T Consensus 417 KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~-~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~--~~~ 493 (694)
T PRK14502 417 KIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMG-EQDLYRNELGIKDPFITENGGAIFIPKDY--FRL 493 (694)
T ss_pred eEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHcCCCCeEEEcCCCEEEECCCc--ccc
Confidence 3345689999987 6778889999999999999999744333 567888999987767653 23322110 001
Q ss_pred hcccCcCCCccceEEeecC-----------CCCcC---C---C-CCCcccccccccchHhhhcCCCCccCCCHHHHHHHH
Q psy8912 374 NLKKDSKIKYKDMVFFDDE-----------ERNAR---S---I-SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYL 435 (538)
Q Consensus 374 ~~~~~~~~~~~~l~~~Dld-----------h~~~s---~---~-~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~L 435 (538)
.+..+.......+...-++ ..+.. . . ..+.+. .+......+ ......+.+. .++.+
T Consensus 494 ~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~--~~~d~~~~e-i~~~TgL~~~---~a~~a 567 (694)
T PRK14502 494 PFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFIT--SFGDMSVED-VSRLTDLNLK---QAELA 567 (694)
T ss_pred cccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEe--cCCcccHHH-HHHhhCCCHH---HHHHH
Confidence 1111111111122222222 00110 0 0 001100 000000111 1111222211 23333
Q ss_pred H-HCCc-eEEEEeCCCchHHHHHHHhhcCCccccc--cceee-cCCchHHHHHHHHHhCCCCCcEEEE--ecccccHHhH
Q psy8912 436 K-QNNC-LVAAASRTTEMLRAHQLVDLFNWNQHFD--HKEIF-PGQKTTHFANLKKATGIEYKDMVFF--DDEERNSHDV 508 (538)
Q Consensus 436 k-~~Gi-klaIASss~~~~~a~~~L~~lgL~~yFd--~~~i~-~~~k~~~~~kal~~lgi~pee~l~~--eDs~~~I~aA 508 (538)
+ .... |+.+......-+.....|+..++.-.+. +.++. ..+|..-...+++.+|++.++++.| ||+.||+.--
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisML 647 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSML 647 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHH
Confidence 3 2222 4433321111112333344445441111 11232 3478888999999999999999999 9999999999
Q ss_pred cccCCEEEE
Q psy8912 509 SPLGVTCIH 517 (538)
Q Consensus 509 k~aGi~~i~ 517 (538)
+.+|.-++.
T Consensus 648 e~Ag~gVAM 656 (694)
T PRK14502 648 ETVDSPILV 656 (694)
T ss_pred HhCCceEEE
Confidence 888885543
No 336
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.18 E-value=0.051 Score=55.67 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred CcCCCccceEEeecCCCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 378 DSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 378 ~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
.-.-+.|.++|||||.-=| .+ -+..-..-|.|.+-|.+||++|..+.+=|..+++ -+...
T Consensus 116 ~~~~~~phVIVfDlD~TLI------------------td-~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~e-HV~~s 175 (297)
T PF05152_consen 116 SLVWEPPHVIVFDLDSTLI------------------TD-EGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNRE-HVRHS 175 (297)
T ss_pred hccCCCCcEEEEECCCccc------------------cc-CCccccCChHHHHHHHHHHHcCCEEEEecCCCHH-HHHHH
Confidence 3566789999999993222 01 1111123478899999999999999999998865 78889
Q ss_pred HhhcCCcccccc
Q psy8912 458 VDLFNWNQHFDH 469 (538)
Q Consensus 458 L~~lgL~~yFd~ 469 (538)
|+.++|.+|||.
T Consensus 176 l~~~~L~~~Fd~ 187 (297)
T PF05152_consen 176 LKELKLEGYFDI 187 (297)
T ss_pred HHHhCCccccEE
Confidence 999999999993
No 337
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.01 E-value=0.16 Score=61.33 Aligned_cols=113 Identities=12% Similarity=-0.053 Sum_probs=76.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCC---------cc-e---------------------e
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---------SN-K---------------------E 103 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~F---------d~-i---------------------e 103 (538)
++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+..-. +. + .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFP-ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 4568999999999999999999999977 9999999999985210 00 0 1
Q ss_pred ecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCCc
Q psy8912 104 IYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDDE 176 (538)
Q Consensus 104 ~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~~ 176 (538)
++.+..|+.=..+.+.+.-..+-+.|+||+.+|..|-+.|++. |.+. .|.. . ....+|+++.++.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG-IAmg~~gt~--v-----ak~aADivl~dd~ 790 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG-IAMGINGSD--V-----AKDASDIVLSDDN 790 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc-EecCCCccH--H-----HHHhcCEEEecCC
Confidence 2333445432333333333345688999999999999999885 3343 3321 1 1235788887643
No 338
>KOG0207|consensus
Probab=94.98 E-value=0.062 Score=62.41 Aligned_cols=85 Identities=12% Similarity=0.202 Sum_probs=67.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
-.+.|++...+..||+.|++++++|+-+. ..++.+.++.|++..+.. ..|..|.+.++.+.++- ..+.||||+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~ae--v~P~~K~~~Ik~lq~~~----~~VaMVGDG 794 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYAE--VLPEQKAEKIKEIQKNG----GPVAMVGDG 794 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEec--cCchhhHHHHHHHHhcC----CcEEEEeCC
Confidence 34668999999999999999999999988 999999999995544433 56666777777765543 569999999
Q ss_pred cccHHHHhhcCC
Q psy8912 134 ERNSHDVSPLGV 145 (538)
Q Consensus 134 ~~DI~aAk~aG~ 145 (538)
.+|-.|-..+.+
T Consensus 795 INDaPALA~AdV 806 (951)
T KOG0207|consen 795 INDAPALAQADV 806 (951)
T ss_pred CCccHHHHhhcc
Confidence 999766666644
No 339
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.90 E-value=0.064 Score=53.12 Aligned_cols=59 Identities=20% Similarity=0.296 Sum_probs=45.8
Q ss_pred CCCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc
Q psy8912 14 KFPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 14 ~~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l 93 (538)
+|+.+|+.|+||||.++- ..+ ..+.+.+.+|++.|++|..+|+.+. .......+.+
T Consensus 5 ~~~~lIFtDlD~TLl~~~----------------------ye~-~pA~pv~~el~d~G~~Vi~~SSKT~-aE~~~l~~~l 60 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS----------------------YEW-QPAAPVLLELKDAGVPVILCSSKTR-AEMLYLQKSL 60 (274)
T ss_pred ccceEEEEcccCcccCCC----------------------CCC-CccchHHHHHHHcCCeEEEeccchH-HHHHHHHHhc
Confidence 467888889999998621 111 2256789999999999999999988 7777777888
Q ss_pred CCC
Q psy8912 94 NLN 96 (538)
Q Consensus 94 gL~ 96 (538)
|+.
T Consensus 61 ~v~ 63 (274)
T COG3769 61 GVQ 63 (274)
T ss_pred CCC
Confidence 775
No 340
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.75 E-value=0.022 Score=57.00 Aligned_cols=133 Identities=13% Similarity=0.110 Sum_probs=76.8
Q ss_pred CccceEEeecCCCCcCCCCCCcc---c-ccccccc---hHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch--H
Q psy8912 382 KYKDMVFFDDEERNARSISKLGV---I-GIQVHRD---KVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--L 452 (538)
Q Consensus 382 ~~~~l~~~Dldh~~~s~~~p~~~---i-~i~~~~~---~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~ 452 (538)
..|+.+|||+|.==+|. +||.. . +..+... ..+ ..+ .....||+.+++++++++|+++.+.|.-+.. +
T Consensus 70 ~~~~avv~DIDeTvLsn-~~y~~~~~~~~~~~~~~~w~~wv-~~~-~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSN-SPYYAYLIFGGESFSPEDWDEWV-ASG-KAPAIPGALELYNYARSRGVKVFFITGRPESQRE 146 (229)
T ss_dssp TSEEEEEEESBTTTEEH-HHHHHHHHHHTHHH-CCHHHHHH-HCT-GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHH
T ss_pred CCCcEEEEECCcccccC-HHHHHHHhhccCCCChHHHHHHH-hcc-cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHH
Confidence 78999999999321111 13310 0 0111111 111 122 2378899999999999999999999975543 2
Q ss_pred HHHHHHhhcCCcccccccee-ecC---------CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc---CCEEEEEC
Q psy8912 453 RAHQLVDLFNWNQHFDHKEI-FPG---------QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVK 519 (538)
Q Consensus 453 ~a~~~L~~lgL~~yFd~~~i-~~~---------~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a---Gi~~i~V~ 519 (538)
.+..-|+..|.... +.... ... .|.....++.++ |... +++|||...|+..++.. |..++-.|
T Consensus 147 ~T~~nL~~~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lP 222 (229)
T PF03767_consen 147 ATEKNLKKAGFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKK-GYRI--IANIGDQLSDFSGAKTAGARAERWFKLP 222 (229)
T ss_dssp HHHHHHHHHTTSTB-SCGEEEEESSTSS------SHHHHHHHHHT-TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-T
T ss_pred HHHHHHHHcCCCcc-chhccccccccccccccccchHHHHHHHHc-CCcE--EEEeCCCHHHhhcccccccccceEEEcC
Confidence 45566888886432 21111 111 144444444343 4333 78899999999985543 45666666
Q ss_pred CC
Q psy8912 520 DG 521 (538)
Q Consensus 520 dg 521 (538)
+.
T Consensus 223 Np 224 (229)
T PF03767_consen 223 NP 224 (229)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 341
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=94.56 E-value=0.13 Score=59.26 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=66.1
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 502 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~ 502 (538)
.++||+.+.+++|++.|+++.++|.-+ +..++.+-+.+|+.++|- ...+.+|.+ ++++++-.-+-+.|+||..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn-~~TA~aIA~elGId~v~A--~~~PedK~~----iV~~lQ~~G~~VaMtGDGv 517 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDN-PLTAAAIAAEAGVDDFLA--EATPEDKLA----LIRQEQAEGRLVAMTGDGT 517 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCcEEEc--cCCHHHHHH----HHHHHHHcCCeEEEECCCc
Confidence 579999999999999999999999765 669999999999987765 233333333 3334433345588999999
Q ss_pred ccHHhHcccCCEE
Q psy8912 503 RNSHDVSPLGVTC 515 (538)
Q Consensus 503 ~~I~aAk~aGi~~ 515 (538)
||.-|-++|.+-+
T Consensus 518 NDAPALa~ADVGI 530 (679)
T PRK01122 518 NDAPALAQADVGV 530 (679)
T ss_pred chHHHHHhCCEeE
Confidence 9999988887654
No 342
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.45 E-value=0.13 Score=59.08 Aligned_cols=87 Identities=9% Similarity=0.031 Sum_probs=67.3
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
-+++||+.+.+++||+.|+++.+.|.-+ +..+..+-+.+|+.++|- .. .|+.=.+++++++-.-+-+.|+||.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn-~~TA~aIA~elGI~~v~A--~~----~PedK~~iV~~lQ~~G~~VaMtGDG 512 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDN-ELTAATIAKEAGVDRFVA--EC----KPEDKINVIREEQAKGHIVAMTGDG 512 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCceEEc--CC----CHHHHHHHHHHHHhCCCEEEEECCC
Confidence 4689999999999999999999999765 669999999999988775 23 3334333344444334568899999
Q ss_pred cccHHhHcccCCEE
Q psy8912 502 ERNSHDVSPLGVTC 515 (538)
Q Consensus 502 ~~~I~aAk~aGi~~ 515 (538)
.||.-|-++|.+-+
T Consensus 513 vNDAPALa~ADVGI 526 (673)
T PRK14010 513 TNDAPALAEANVGL 526 (673)
T ss_pred hhhHHHHHhCCEEE
Confidence 99999999887643
No 343
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=94.43 E-value=0.3 Score=49.16 Aligned_cols=125 Identities=17% Similarity=0.136 Sum_probs=76.4
Q ss_pred CcCCCccceEEeecC--CCCcCCCCCCcccc-ccccc---chHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch
Q psy8912 378 DSKIKYKDMVFFDDE--ERNARSISKLGVIG-IQVHR---DKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM 451 (538)
Q Consensus 378 ~~~~~~~~l~~~Dld--h~~~s~~~p~~~i~-i~~~~---~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~ 451 (538)
..+.+.| .||+||| -+|.|.--.|.+.- ..+.+ +.-++. ....+-||+.|||++.-++|.++--.|+-.++
T Consensus 74 ~~k~K~~-aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a--~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~ 150 (274)
T COG2503 74 KKKGKKK-AVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQA--KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQE 150 (274)
T ss_pred cccCCCc-eEEEecchHhhcCccccchhhhcCCCCCccchHHHHhh--cccccCccHHHHHHHHHhcCcEEEEEeccchh
Confidence 3556666 9999999 34443222222210 01101 122222 24678899999999999999999999966543
Q ss_pred H---HHHHHHhhcCCccccccceeec---CCchHHHHHHHHHhCCCCCcEEEEecccccHHhHc
Q psy8912 452 L---RAHQLVDLFNWNQHFDHKEIFP---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS 509 (538)
Q Consensus 452 ~---~a~~~L~~lgL~~yFd~~~i~~---~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk 509 (538)
. -...-|+.+||..--....+.- ..|..++...-+ ..+=+++|||...|+.+..
T Consensus 151 ~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 151 NEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred cccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence 2 2445688888876544222222 245555555544 4556889999999976543
No 344
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.30 E-value=0.23 Score=59.24 Aligned_cols=118 Identities=11% Similarity=0.005 Sum_probs=78.9
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc---ce--------------------eecCCCCH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS---NK--------------------EIYPGQKT 110 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd---~i--------------------e~~~~~Kp 110 (538)
-+|.|++.++++.|+++|+++.++|+-.. ..+..+.+..|+..--. .+ .++.+-.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~-~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHV-ETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCH-HHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 45779999999999999999999999977 99999999999753221 11 11222245
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhh
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEH 179 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~ 179 (538)
+.=..+.+.+.-.-.-+.|.||+.||+.|-++|.+.......|.. .. .+.+|++..++.-..
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd--aa-----k~Aadivl~dd~~~~ 686 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD--AA-----KEAADIVLLDDNFAT 686 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHH--HH-----HhhcceEeecCcHHH
Confidence 332333333333345788999999999999999887544433332 11 123677776654333
No 345
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.13 E-value=0.33 Score=58.50 Aligned_cols=115 Identities=11% Similarity=0.027 Sum_probs=76.1
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCc------------------------ce--------
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS------------------------NK-------- 102 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd------------------------~i-------- 102 (538)
++.|++.+.++.|+++|+++.++|+... ..+..+.+.+|+..--. .+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~-~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 4568999999999999999999999977 88999999998832100 00
Q ss_pred ---------------eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCC
Q psy8912 103 ---------------EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGID 166 (538)
Q Consensus 103 ---------------e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~ 166 (538)
.++.+..|+.=..+.+.+.-...-+.|+||+.+|+.|-++|.+. |.+. .|. +.. ..
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVG-iamg~~G~--~va-----k~ 718 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG-VAMGIAGS--DVS-----KQ 718 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcc-eecCCccc--HHH-----HH
Confidence 03333455432333333332335688999999999999999875 2232 222 211 23
Q ss_pred CCCEEEeCCchh
Q psy8912 167 YKDMIYFDDEQE 178 (538)
Q Consensus 167 ~~d~Ii~d~~~~ 178 (538)
.+|+++.++.-.
T Consensus 719 aADivL~dd~f~ 730 (997)
T TIGR01106 719 AADMILLDDNFA 730 (997)
T ss_pred hhceEEecCCHH
Confidence 578888775433
No 346
>KOG2470|consensus
Probab=94.07 E-value=0.05 Score=56.99 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCcceeecCCCCHH----------------------
Q psy8912 57 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYPGQKTT---------------------- 111 (538)
Q Consensus 57 ~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~ie~~~~~Kp~---------------------- 111 (538)
.|...++|..|++.|.++.++||++. ..+..-+..+ .|.++||.+ +....||+
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPy-sFVd~GM~flvG~~WRdlFDVV-IvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPY-SFVDKGMRFLVGDDWRDLFDVV-IVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCch-hhhhcCceeeeCccHHhhhhee-EEecCCCcccccccCcchhhcccccchhhh
Confidence 46678999999999999999999988 7777655544 345778865 21111110
Q ss_pred --------------HHHHHHHHcCCCCCcEEEEeCCc-ccHHHHh-hcCCeEEEEC
Q psy8912 112 --------------HFESLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCIHSW 151 (538)
Q Consensus 112 --------------~f~~ale~lgi~P~e~L~IGDs~-~DI~aAk-~aG~~tI~V~ 151 (538)
.....++..|....+++++||.. +|+..-. +.|+++-++-
T Consensus 320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 14555677788889999999996 5877766 7898876553
No 347
>PLN03017 trehalose-phosphatase
Probab=93.91 E-value=0.068 Score=57.02 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=41.1
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
.+|++|+||||.+-- .......+.|++.+.|++|. +|++++|+|+++. ..+...+
T Consensus 112 ~llflD~DGTL~Piv-----------------~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~-~~l~~~~ 166 (366)
T PLN03017 112 IVMFLDYDGTLSPIV-----------------DDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCI-DKVYNFV 166 (366)
T ss_pred eEEEEecCCcCcCCc-----------------CCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCH-HHHHHhh
Confidence 567789999998410 01223467789999999999 7799999999988 6666553
No 348
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.47 E-value=0.26 Score=54.57 Aligned_cols=83 Identities=16% Similarity=0.111 Sum_probs=63.0
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDE 133 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs 133 (538)
-.+.|++.+.++.|++.|+++.++|+... ..+..+-+.+|+ | ....|+--..+.+++.-....+.|+||.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi---~------~~~~p~~K~~~v~~l~~~g~~v~~vGDg 415 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI---F------ARVTPEEKAALVEALQKKGRVVAMTGDG 415 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc---e------eccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 36779999999999999999999999988 889999999986 1 2234433223333332233679999999
Q ss_pred cccHHHHhhcCCe
Q psy8912 134 ERNSHDVSPLGVT 146 (538)
Q Consensus 134 ~~DI~aAk~aG~~ 146 (538)
.+|..+-+.+++.
T Consensus 416 ~nD~~al~~Advg 428 (499)
T TIGR01494 416 VNDAPALKKADVG 428 (499)
T ss_pred hhhHHHHHhCCCc
Confidence 9999999888764
No 349
>PLN02151 trehalose-phosphatase
Probab=93.46 E-value=0.077 Score=56.40 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=42.6
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
.++++|+||||.+-- .......+-|++.+.|+.|.+ +.+++|+|+.+. ..+...+.
T Consensus 99 ~ll~lDyDGTL~PIv-----------------~~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR~~-~~l~~~~~ 154 (354)
T PLN02151 99 IVMFLDYDGTLSPIV-----------------DDPDRAFMSKKMRNTVRKLAK-CFPTAIVSGRCR-EKVSSFVK 154 (354)
T ss_pred eEEEEecCccCCCCC-----------------CCcccccCCHHHHHHHHHHhc-CCCEEEEECCCH-HHHHHHcC
Confidence 578889999997510 113455678999999999994 579999999988 66666654
No 350
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=93.28 E-value=0.35 Score=48.75 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=63.7
Q ss_pred ceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCC---CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEE
Q psy8912 72 CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 148 (538)
Q Consensus 72 ikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~---~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI 148 (538)
..-++||++.- ..+-..+=.+++..+|..-.++.. .|...|+.+.+++|-+...-++|||+...-.+|+..+++++
T Consensus 176 ~vNvLVTs~qL-VPaLaKcLLy~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 176 CINVLVTSGQL-IPSLAKCLLFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred eeEEEEEcCcc-HHHHHHHHHhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 34566776655 222233335677888886555554 46789999999999988999999999999999999999999
Q ss_pred EECCCCCch
Q psy8912 149 HSWLMMSSG 157 (538)
Q Consensus 149 ~V~~G~~~~ 157 (538)
-+.......
T Consensus 255 ~I~~h~Dl~ 263 (274)
T TIGR01658 255 KIDLHPDSS 263 (274)
T ss_pred EeecCCCHH
Confidence 997655443
No 351
>KOG0202|consensus
Probab=93.25 E-value=0.32 Score=56.35 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=83.9
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCC-------------Ccce------------eecCCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-------------FSNK------------EIYPGQ 108 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~-------------Fd~i------------e~~~~~ 108 (538)
-.|.|++.+.++.|++.|+++.++|+-.. ..+..+.+..|+... ||.. ..+.+.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~-~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNK-ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 45779999999999999999999999988 999999999997533 2221 011122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEEC-CCCCchHhHHhhCCCCCCEEEeCC-chhhHHhhhh
Q psy8912 109 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSW-LMMSSGRLKEATGIDYKDMIYFDD-EQEHVNDISK 185 (538)
Q Consensus 109 Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~-~G~~~~~~~~~l~~~~~d~Ii~d~-~~~~~~~i~~ 185 (538)
.|..=.++.+.++-.-+=+.|-||+.+|-.|-+.|.+. |+.. .|.. ...+.+|+|..|+ -.-++..+++
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG-IAMG~~GTd-------VaKeAsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG-IAMGISGTD-------VAKEASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc-eeecCCccH-------hhHhhhhcEEecCcHHHHHHHHHH
Confidence 34444444444444455688999999999999999875 3343 4442 2233568888764 4445555554
No 352
>PLN02580 trehalose-phosphatase
Probab=93.14 E-value=0.094 Score=56.34 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=43.6
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~ 92 (538)
.+++||+||||-+-- .......+-|++.++|+.|.+. .+++|+|+.+. ..++..+..
T Consensus 120 ~~LfLDyDGTLaPIv-----------------~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~-~~L~~~l~~ 176 (384)
T PLN02580 120 IALFLDYDGTLSPIV-----------------DDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSR-DKVYELVGL 176 (384)
T ss_pred eEEEEecCCccCCCC-----------------CCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCH-HHHHHHhCC
Confidence 577789999996510 1234566788999999999988 58999999988 777766643
No 353
>KOG1618|consensus
Probab=93.12 E-value=0.12 Score=53.76 Aligned_cols=102 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred ceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC----CceEEEEcCCCcH---HHHHHH
Q psy8912 17 KMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSEI---LHAKQI 89 (538)
Q Consensus 17 KaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~----GikiaIvTn~~~p---~~~~~~ 89 (538)
=++.||+||||+. .-++.|++.++|+.|.+. .++...+||+... ..++.+
T Consensus 36 fgfafDIDGVL~R-----------------------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l 92 (389)
T KOG1618|consen 36 FGFAFDIDGVLFR-----------------------GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL 92 (389)
T ss_pred eeEEEecccEEEe-----------------------cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH
Confidence 4799999999986 668999999999999988 7999999997541 334444
Q ss_pred HHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEE
Q psy8912 90 LNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH 149 (538)
Q Consensus 90 L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~ 149 (538)
-+.+|.. .+.-.+..+. .+|+... ....++++++|+... -.-|+..|++.|.
T Consensus 93 S~~Lgv~--Vs~dqviqSH--sP~r~l~---~~~~k~vLv~G~~~v-r~vAegyGFk~Vv 144 (389)
T KOG1618|consen 93 SALLGVE--VSADQVIQSH--SPFRLLV---EYHYKRVLVVGQGSV-REVAEGYGFKNVV 144 (389)
T ss_pred HHhhCCc--cCHHHHHhhc--ChHHHHh---hhhhceEEEecCCcH-HHHhhccCcccee
Confidence 4555532 1110111111 2344444 234578999996543 3567778887653
No 354
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=92.95 E-value=0.69 Score=46.62 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
.|......+++++++++++++++|||.+|+.+- ..+..+|.|.+..
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 578899999999999999999999999999888 7778888887643
No 355
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=92.70 E-value=0.3 Score=57.06 Aligned_cols=99 Identities=9% Similarity=0.032 Sum_probs=70.6
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-cccc-----------------------eeecCC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-FDHK-----------------------EIFPGQ 476 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-Fd~~-----------------------~i~~~~ 476 (538)
.-+++|++.+.++.|++.|+++.+.|.-+ +..++.+-+.+||.+- +... .++.+-
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDH-LAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 34689999999999999999999999765 5689999999999641 1100 022223
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.|+.=.++++.++-.-+-+.|+||..||.-|-++|.+- |++..|
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~g 562 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGA 562 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCC
Confidence 34443444555554556789999999999999998766 344444
No 356
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=92.69 E-value=0.29 Score=46.61 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=62.3
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC-CCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDD 132 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~-~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGD 132 (538)
..+-.++...|..++++ .+++.+|.... ...+..-+.+... ..|+.+++.+.... -.+.+..++ -+|++|
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~-dl~~iT~~~l~~q~ih~~~l~i~g~h~K---V~~vrth~i----dlf~ed 141 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKA-DLTRITYAWLFIQNIHYDHLEIVGLHHK---VEAVRTHNI----DLFFED 141 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhH-HHHHHHHHHHHHhccchhhhhhhccccc---chhhHhhcc----Cccccc
Confidence 44557788889999887 66777777644 3333332222221 34666555544322 345666666 578999
Q ss_pred Cc-ccHHHHhhcCCeEEEECCCCCchH
Q psy8912 133 EE-RNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 133 s~-~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
+. +-++.|+++|++.+++.+.++...
T Consensus 142 ~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 142 SHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred cCchHHHHHHhcCCcEEEecCcccccc
Confidence 95 458889999999999987765433
No 357
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=92.68 E-value=0.28 Score=54.08 Aligned_cols=95 Identities=11% Similarity=0.095 Sum_probs=74.4
Q ss_pred cCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcc
Q psy8912 56 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEER 135 (538)
Q Consensus 56 l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~ 135 (538)
+-||++|-+.+||+.|++...+|+-+. -.+..+.+..|++++.-. .+|+--....++.+-.-.=+.|.||..+
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~-~TAa~IA~EAGVDdfiAe------atPEdK~~~I~~eQ~~grlVAMtGDGTN 520 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFIAE------ATPEDKLALIRQEQAEGRLVAMTGDGTN 520 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHhCchhhhhc------CChHHHHHHHHHHHhcCcEEEEcCCCCC
Confidence 459999999999999999999999876 888999999998765544 5675545555665656667889999999
Q ss_pred cHHHHhhcCCeEEEECCCCCchH
Q psy8912 136 NSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 136 DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
|-.+-.++.+. +..++|.+...
T Consensus 521 DAPALAqAdVg-~AMNsGTqAAk 542 (681)
T COG2216 521 DAPALAQADVG-VAMNSGTQAAK 542 (681)
T ss_pred cchhhhhcchh-hhhccccHHHH
Confidence 98888887763 45777765443
No 358
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=92.66 E-value=0.43 Score=56.71 Aligned_cols=98 Identities=9% Similarity=0.024 Sum_probs=69.7
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--ccc-----------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HFD-----------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yFd-----------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++.+.|.-+ +..+..+-+.+||.. ... ...++.+-.|+.=.
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~-~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDN-EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 4689999999999999999999999765 568999999999961 100 00222333344434
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++.+.++-.-+-+.|+||..||.-|-++|.+-+. +..|
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIA-mg~g 630 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGIS-VDTA 630 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEE-eCCc
Confidence 4444444444578899999999999999887654 4344
No 359
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.31 E-value=0.25 Score=42.91 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=48.5
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEe
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~e 499 (538)
-.++||+.|+|++|+++|.++.++|+++... ....-|+.+|+. ++..++.+...+ ....+++. .....+.+++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~--~~~~~i~ts~~~--~~~~l~~~-~~~~~v~vlG 87 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP--VDEDEIITSGMA--AAEYLKEH-KGGKKVYVLG 87 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEHHHH--HHHHHHHH-TTSSEEEEES
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC--CCcCEEEChHHH--HHHHHHhc-CCCCEEEEEc
Confidence 3478999999999999999999999886442 233346888876 232245444221 11222221 2345566666
Q ss_pred cccccHHhHcccCC
Q psy8912 500 DEERNSHDVSPLGV 513 (538)
Q Consensus 500 Ds~~~I~aAk~aGi 513 (538)
-. .-.+..+.+|+
T Consensus 88 ~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 88 SD-GLREELREAGF 100 (101)
T ss_dssp -H-HHHHHHHHTTE
T ss_pred CH-HHHHHHHHcCC
Confidence 43 33344555554
No 360
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=92.24 E-value=0.88 Score=45.49 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=32.0
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
...++-||+.+.++.|.++ +.-+|+|.+-. .++......+|+
T Consensus 80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~-qy~~r~a~~ig~ 121 (315)
T COG4030 80 LSAKLVPGAEETMATLQER-WTPVVISTSYT-QYLRRTASMIGV 121 (315)
T ss_pred hhcccCCChHHHHHHHhcc-CCceEEeccHH-HHHHHHHHhcCC
Confidence 3477899999999999988 55566665546 777777777776
No 361
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.16 E-value=0.82 Score=45.71 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=41.1
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc-------CCEEEEECCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a-------Gi~~i~V~dg 521 (538)
+|...+.++++++++++++++||||+.+|+.+.+.+ |...+.|.+|
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 577889999999999999999999999999999988 7888888544
No 362
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=91.91 E-value=0.67 Score=47.17 Aligned_cols=127 Identities=15% Similarity=0.096 Sum_probs=72.2
Q ss_pred EEEeCCCCCChhhHhhhh--chhHHHH--HHHHhhhcCCCccCCCHHHHHHHhhhC------CceEEEEcCCCcHH--HH
Q psy8912 19 VVFDLDYTLWPLHVHDLV--APFKKIG--QKVMDAKGTLIKYYRGVPEILRYLKEN------KCLVAAASRTSEIL--HA 86 (538)
Q Consensus 19 VIFDlDGTLw~~~~~~~i--~~~~~~~--~~i~~~~~~~~~l~pgv~elL~~Lk~~------GikiaIvTn~~~p~--~~ 86 (538)
|.||-|+||....-.... .++.... +.-.........|+......|.+|+++ -+++++||..+.|. .+
T Consensus 124 IAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~Rv 203 (264)
T PF06189_consen 124 IAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERV 203 (264)
T ss_pred EEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHH
Confidence 799999999765533222 2221111 000011122233444455556666553 48899999887753 33
Q ss_pred HHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCC
Q psy8912 87 KQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 87 ~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
-..|+.+|+. .|..-..++-....++++. + -=+|++|....++.|. .++.+.+|.+|..
T Consensus 204 I~TLr~Wgv~--vDEafFLgG~~K~~vL~~~---~----phIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 204 IRTLRSWGVR--VDEAFFLGGLPKGPVLKAF---R----PHIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred HHHHHHcCCc--HhHHHHhCCCchhHHHHhh---C----CCEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 3445566653 2221112332223333332 2 2489999999999998 7999999998864
No 363
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=91.84 E-value=0.52 Score=56.49 Aligned_cols=94 Identities=7% Similarity=-0.049 Sum_probs=68.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc---------cc------------cceeecCCchH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH---------FD------------HKEIFPGQKTT 479 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y---------Fd------------~~~i~~~~k~~ 479 (538)
+-+++|++.+.++.|++.|+++.++|.-+ +..|..+-+.+||.+- |+ ...++.+-.|+
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe 655 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDN-IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL 655 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence 34789999999999999999999999765 5689999999999621 11 01233444455
Q ss_pred HHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 480 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 480 ~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
.=.++++.++-.-+-+.++||..||.-|-++|.+-+
T Consensus 656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGI 691 (941)
T TIGR01517 656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGF 691 (941)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcce
Confidence 534444444444456899999999999999876544
No 364
>KOG2134|consensus
Probab=91.65 E-value=0.31 Score=51.97 Aligned_cols=109 Identities=20% Similarity=0.193 Sum_probs=65.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhh-cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH----------
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAK-GTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---------- 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~-~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p---------- 83 (538)
.-|.+.||+||||.+.--...+ ... .+-.-++|.+..=|+.|.+.|+.++|.||...+
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf-----------~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f 142 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVF-----------PKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEF 142 (422)
T ss_pred CcceEEEecCCceeecCCccee-----------eccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHH
Confidence 3578999999999553211111 001 112347788889999999999999999997553
Q ss_pred -HHHHHHHHHcCCC-CCCcceeecCCCCH--HHHHHHHHHcC----CCCCcEEEEeCCc
Q psy8912 84 -LHAKQILNLINLN-QYFSNKEIYPGQKT--THFESLKKATG----IEYKDMVFFDDEE 134 (538)
Q Consensus 84 -~~~~~~L~~lgL~-~~Fd~ie~~~~~Kp--~~f~~ale~lg----i~P~e~L~IGDs~ 134 (538)
..+..+.+.+++. ..+..+-...-.|| .++....+..+ +.-..+.|+||..
T Consensus 143 ~~Ki~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaa 201 (422)
T KOG2134|consen 143 KKKIKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAA 201 (422)
T ss_pred HHHHHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhc
Confidence 3344555555543 12222111112466 66666665543 4445666888853
No 365
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.45 E-value=0.19 Score=48.36 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=38.2
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
+|...+..++++++++++++++|||+.+|+..++.+|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 78888999999999999999999999999999999998764
No 366
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=91.41 E-value=0.47 Score=56.60 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=67.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--c-----cc------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--H-----FD------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--y-----Fd------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++-+.|.-+ +..+..+-+.+||.. . ++ ...++.+-.|++=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDS-ELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 4689999999999999999999999765 568999999999961 0 00 00123333444444
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
++.+.++-.-+-+.|+||..||.-|-++|.+-.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGI 660 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGI 660 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEE
Confidence 445555444566889999999999999877654
No 367
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=91.31 E-value=0.41 Score=49.71 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc
Q psy8912 425 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF 467 (538)
Q Consensus 425 ~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF 467 (538)
++-+.+.|++|+++|+++.+||+.... .+..+.+.+++..+|
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~-ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRA-QLEHLCRQLRLEHPF 61 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHhCCCCeE
Confidence 345788999999999999999999765 667789999987544
No 368
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=91.23 E-value=1.7 Score=40.81 Aligned_cols=92 Identities=10% Similarity=0.064 Sum_probs=53.3
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHH---HHHHhh-----cCCcc--ccc--cceee--c----CCch-----H
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRA---HQLVDL-----FNWNQ--HFD--HKEIF--P----GQKT-----T 479 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a---~~~L~~-----lgL~~--yFd--~~~i~--~----~~k~-----~ 479 (538)
.+.|++.++++.|+++|+++.++|+.+.. .+ +..|+. .++.. .+- ...+. . ..++ +
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~-~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIG-QADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHH-HHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 35799999999999999999999988643 33 356766 22321 110 00000 0 0112 1
Q ss_pred HHHHHHHHhCCCCCcE-EEEecccccHHhHcccCCEE
Q psy8912 480 HFANLKKATGIEYKDM-VFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 480 ~~~kal~~lgi~pee~-l~~eDs~~~I~aAk~aGi~~ 515 (538)
....+.+.+.-.-... +.|||+..|+++=+++|+..
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 1233322222111223 34899999999988898864
No 369
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=91.08 E-value=2 Score=47.93 Aligned_cols=90 Identities=8% Similarity=-0.005 Sum_probs=54.0
Q ss_pred cCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCCCCcce-ee---------cCCC---C-HHHHHHHHHHc
Q psy8912 56 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNK-EI---------YPGQ---K-TTHFESLKKAT 120 (538)
Q Consensus 56 l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~~Fd~i-e~---------~~~~---K-p~~f~~ale~l 120 (538)
+.|.+.+ .+++.|.. +|+|.+++ .+++..++. +|++...... +. ..+. . .+-...+.+.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~-~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPR-IMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcH-HHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 3444444 45567764 99999988 899999976 7876432111 11 0111 1 12233333556
Q ss_pred CCCCCcEEEEeCCcccHHHHhhcCCeEEEECC
Q psy8912 121 GIEYKDMVFFDDEERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 121 gi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~ 152 (538)
|.+... +..||+.+|...-..++-. +.|+.
T Consensus 186 g~~~~~-~aYgDS~sD~plL~~a~e~-y~V~~ 215 (497)
T PLN02177 186 GDALPD-LGLGDRETDHDFMSICKEG-YMVPR 215 (497)
T ss_pred CCCCce-EEEECCccHHHHHHhCCcc-EEeCC
Confidence 654444 8999999999988877754 44543
No 370
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.07 E-value=1.2 Score=45.85 Aligned_cols=98 Identities=4% Similarity=-0.053 Sum_probs=61.0
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHhhcCCccccccceeecC-----CchHHHHHH----HHHhC
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEML--RAHQLVDLFNWNQHFDHKEIFPG-----QKTTHFANL----KKATG 489 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~--~a~~~L~~lgL~~yFd~~~i~~~-----~k~~~~~ka----l~~lg 489 (538)
..+..||+.+++++|+++|+++.++|+-.+.. .+..-|+..|...+ +..-.-+. ...-.|+.. +.+-|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 56788999999999999999999999776432 35556778787543 21111111 111123312 12223
Q ss_pred CCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 490 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 490 i~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
. .=...|||...|+......+-.+.-.|+.
T Consensus 222 Y--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 222 Y--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred c--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 3 22577999999996555333577777775
No 371
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=90.25 E-value=0.99 Score=54.81 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=37.4
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN 96 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~ 96 (538)
++-|++.+.++.|+++|+++.++|+-+. ..+..+.+..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~-~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNP-LTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence 4779999999999999999999999977 8899999999983
No 372
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=90.20 E-value=0.85 Score=54.44 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=69.8
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc--cc-----c------------cceeecCCchHHHH
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ--HF-----D------------HKEIFPGQKTTHFA 482 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~--yF-----d------------~~~i~~~~k~~~~~ 482 (538)
-+++|++.+.+++|++.|+++-+.|.-+ +..+..+-+.+||.. .. + ...++.+-.|++=.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDN-PIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 4689999999999999999999999765 668999999999961 00 0 00122333444434
Q ss_pred HHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 483 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 483 kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
++++.++-.-+-+.|+||..||.-|-++|.+- |++..|
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~g 665 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSG 665 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcc
Confidence 44555544445688999999999999998775 345444
No 373
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=89.69 E-value=1.2 Score=49.48 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=61.3
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+-.++|++.+++++|++.|+++.++|.-+ +..+..+-+.+|+ |- ...+..|.+.. +++.-....+.+++|
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~-~~~a~~ia~~lgi---~~--~~~p~~K~~~v----~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDN-VLTAKAIAKELGI---FA--RVTPEEKAALV----EALQKKGRVVAMTGD 414 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCc---ee--ccCHHHHHHHH----HHHHHCCCEEEEECC
Confidence 45689999999999999999999999876 4588888888887 11 12222333333 333223367999999
Q ss_pred ccccHHhHcccCCE
Q psy8912 501 EERNSHDVSPLGVT 514 (538)
Q Consensus 501 s~~~I~aAk~aGi~ 514 (538)
..||..+-++|++-
T Consensus 415 g~nD~~al~~Advg 428 (499)
T TIGR01494 415 GVNDAPALKKADVG 428 (499)
T ss_pred ChhhHHHHHhCCCc
Confidence 99999888887643
No 374
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=89.66 E-value=0.97 Score=54.83 Aligned_cols=94 Identities=10% Similarity=-0.055 Sum_probs=67.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-c--------cc----------------------c
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-F--------DH----------------------K 470 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-F--------d~----------------------~ 470 (538)
-+++|++.+.++.|++.|+++.++|.-+ +..+..+-+.+||.+- + +. .
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 3689999999999999999999999765 5689999999999531 0 00 0
Q ss_pred eeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 471 EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 471 ~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.++.+-.|++=.++++.++-.-+-+.++||..||.-+-++|.+-+.
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence 1222223334334444454445678899999999999999876553
No 375
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=89.46 E-value=0.51 Score=48.37 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=44.1
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~ 91 (538)
..++++||+||||.+.. .......+.+++.++|+.|.++ ...++|+|+.+. ..++..+.
T Consensus 17 ~~~~~~lDyDGTl~~i~-----------------~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~-~~l~~~~~ 76 (266)
T COG1877 17 RKRLLFLDYDGTLTEIV-----------------PHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL-AELERLFG 76 (266)
T ss_pred cceEEEEeccccccccc-----------------cCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHhcC
Confidence 45899999999995411 1233566788999999999988 445999999977 66666655
No 376
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=89.34 E-value=1.3 Score=53.53 Aligned_cols=94 Identities=9% Similarity=-0.004 Sum_probs=66.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcccc----------------------------c-----
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHF----------------------------D----- 468 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yF----------------------------d----- 468 (538)
-+++|+|.+.++.|+++|+++.++|.-+ +..+..+.+.+|+.+-- +
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDH-PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 3689999999999999999999999776 55889999999984210 0
Q ss_pred -------------cc-eeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEE
Q psy8912 469 -------------HK-EIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI 516 (538)
Q Consensus 469 -------------~~-~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i 516 (538)
.. .++.+-.|++=.++.+.++-.-.-+.++||..||+.+-++|.+-+.
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 00 0223333444333444444334568899999999999999876553
No 377
>PLN02382 probable sucrose-phosphatase
Probab=89.28 E-value=1.3 Score=48.25 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHh---CCCCCcEEEEecccccHHhHcccCCEEEEECCC
Q psy8912 476 QKTTHFANLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 476 ~k~~~~~kal~~l---gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+|..-+..+++++ |++++++++|||+.||++--+.+|+..|+|.++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 6888888898998 999999999999999999999999888888774
No 378
>KOG0207|consensus
Probab=89.26 E-value=0.91 Score=53.16 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEE
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFF 498 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~ 498 (538)
+-+-.++||+...++.||+.|++..+.|.-+. .-|+.+-++.|+.+-|. +..+.+|.++++++.+ ...-+.+|
T Consensus 719 ~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~a--ev~P~~K~~~Ik~lq~----~~~~VaMV 791 (951)
T KOG0207|consen 719 ALEDQVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYA--EVLPEQKAEKIKEIQK----NGGPVAMV 791 (951)
T ss_pred EeccccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEe--ccCchhhHHHHHHHHh----cCCcEEEE
Confidence 33456899999999999999999999998764 48899999999666555 4556667776665543 33668999
Q ss_pred ecccccHHh
Q psy8912 499 DDEERNSHD 507 (538)
Q Consensus 499 eDs~~~I~a 507 (538)
||..||--|
T Consensus 792 GDGINDaPA 800 (951)
T KOG0207|consen 792 GDGINDAPA 800 (951)
T ss_pred eCCCCccHH
Confidence 999999444
No 379
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=89.19 E-value=2 Score=44.97 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=67.1
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHH---HHHHHHc
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHA---KQILNLI 93 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~---~~~L~~l 93 (538)
.+|=|+|.|+..+++.... +..++.++ -+...-.++|||..+.+.|.+.| .++.-+||++- ... ++.+...
T Consensus 163 giISDiDDTV~~T~V~~~~---r~~~~s~~-l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw-~~f~~L~efi~~~ 237 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGP---RKAGRSLL-LHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPW-QLFPTLQEFITNR 237 (373)
T ss_pred eeeeccccceEecccccch---HHHHHHhh-hcccccCCCCCHHHHHHHHHhcCCCCeEEecCChh-HhHHHHHHHHhcC
Confidence 4788999999554432211 11111111 12445679999999999999998 89999999854 222 2222222
Q ss_pred CCC----------CCCcce-eecCCCCHHHHHHHHHHcCCCCCcEEEEeCC-cccHHH
Q psy8912 94 NLN----------QYFSNK-EIYPGQKTTHFESLKKATGIEYKDMVFFDDE-ERNSHD 139 (538)
Q Consensus 94 gL~----------~~Fd~i-e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs-~~DI~a 139 (538)
++. ..|+.+ +.....|-.....++.++. -...+.|||+ ..|.+.
T Consensus 238 ~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 238 NFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred CCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhCC--CceEEEecCCCCcCHHH
Confidence 221 234443 1122235556666666553 3678889998 457543
No 380
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=89.18 E-value=0.89 Score=46.07 Aligned_cols=114 Identities=12% Similarity=0.152 Sum_probs=62.1
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCcc----------cccc-ceeec-CCchHH-HHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQ----------HFDH-KEIFP-GQKTTH-FANLKKA 487 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~----------yFd~-~~i~~-~~k~~~-~~kal~~ 487 (538)
.+.|++|+.++++.|+++++|+-|.|+.- .+.++.+|++.|... .||. ..+.. .++.-| |.|--..
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 48899999999999999999999999875 679999999986431 2330 01100 011111 2111111
Q ss_pred h-------CC-CCCcEEEEecccccHHhHcccC--CEEEEECCCCCHHHHHHHHHHHHhc
Q psy8912 488 T-------GI-EYKDMVFFDDEERNSHDVSPLG--VTCIHVKDGMSHSVLHKGLKQWASK 537 (538)
Q Consensus 488 l-------gi-~pee~l~~eDs~~~I~aAk~aG--i~~i~V~dg~t~~~~~~~l~~~~~~ 537 (538)
+ .+ ...++|..||+..|+.-|.-.. -.++-| |+=.+..++.|+.|.+.
T Consensus 167 l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkI--GFLn~~ve~~l~~Y~~~ 224 (246)
T PF05822_consen 167 LEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKI--GFLNDKVEENLEKYLEA 224 (246)
T ss_dssp HTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEE--EEE-SSHHHHHHHHHCC
T ss_pred ccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEE--EecccCHHHHHHHHHhc
Confidence 1 22 4568999999999988876542 122222 33334456667777653
No 381
>KOG3189|consensus
Probab=88.72 E-value=0.64 Score=45.54 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=43.4
Q ss_pred eEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC--C
Q psy8912 18 MVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN--L 95 (538)
Q Consensus 18 aVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg--L 95 (538)
+++||.||||.+ ......|.+.++|+.||++ +.++++-++.- ....+++| +
T Consensus 13 l~lfdvdgtLt~----------------------~r~~~~~e~~~~l~~lr~~-v~ig~VggsDl----~k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTP----------------------PRQKVTPEMLEFLQKLRKK-VTIGFVGGSDL----SKQQEQLGDNV 65 (252)
T ss_pred EEEEecCCcccc----------------------ccccCCHHHHHHHHHHhhh-eEEEEeecHHH----HHHHHHhchhH
Confidence 789999999975 2456788999999999988 88999988744 44445554 2
Q ss_pred CCCCcce
Q psy8912 96 NQYFSNK 102 (538)
Q Consensus 96 ~~~Fd~i 102 (538)
.+.||+.
T Consensus 66 l~~fDY~ 72 (252)
T KOG3189|consen 66 LEEFDYV 72 (252)
T ss_pred Hhhhccc
Confidence 3566654
No 382
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=88.10 E-value=0.88 Score=43.90 Aligned_cols=92 Identities=11% Similarity=0.143 Sum_probs=61.2
Q ss_pred cCCCHHHHHHHHHHCCceEEEEeCCCch---HHHHHHHhhcCCccccccceeecCCchHH--HHH--HHHHhCCCCCcEE
Q psy8912 424 YYRDVPAILKYLKQNNCLVAAASRTTEM---LRAHQLVDLFNWNQHFDHKEIFPGQKTTH--FAN--LKKATGIEYKDMV 496 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~GiklaIASss~~~---~~a~~~L~~lgL~~yFd~~~i~~~~k~~~--~~k--al~~lgi~pee~l 496 (538)
++.-+++++.--.++|=.+...|....- .....+-+.|+|.+.-- .++.++|++. |.+ .++.- .--|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p--v~f~Gdk~k~~qy~Kt~~i~~~----~~~I 188 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP--VIFAGDKPKPGQYTKTQWIQDK----NIRI 188 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc--eeeccCCCCcccccccHHHHhc----CceE
Confidence 3444666666667899999998865432 13344456678766554 4566665533 332 23333 3468
Q ss_pred EEecccccHHhHcccCCEEEEECCC
Q psy8912 497 FFDDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 497 ~~eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
+.|||.+||.|||.+|+.-|.+-..
T Consensus 189 hYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 189 HYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred EecCCchhhhHHHhcCccceeEEec
Confidence 9999999999999999998887553
No 383
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=87.45 E-value=1.5 Score=53.24 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=35.4
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
-++.||+.+.++.|+++|++++++|+-.. +.+..+....|+
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCC
Confidence 35779999999999999999999999866 777777777765
No 384
>KOG2882|consensus
Probab=87.11 E-value=1.1 Score=46.35 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=44.0
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEeccc-ccHHhHcccCCEEEEECCCCCHH
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~-~~I~aAk~aGi~~i~V~dg~t~~ 525 (538)
+...++..++++.+++|++|+||||+. .||.=+++.|++++.|-.|.+..
T Consensus 225 P~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~l 275 (306)
T KOG2882|consen 225 PSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTL 275 (306)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcH
Confidence 445568899999999999999999995 68999999999999999987744
No 385
>KOG3107|consensus
Probab=86.09 E-value=3.6 Score=43.98 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=62.6
Q ss_pred CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCC---CHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeE
Q psy8912 71 KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQ---KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 71 GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~---Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~t 147 (538)
++.-+++|+..- ...-..+-.+||...|..-.++... |-..|+++.+++|- ...-++|||+...-.+|++..|.+
T Consensus 370 ncvnVlvTttqL-ipalaKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf 447 (468)
T KOG3107|consen 370 NCVNVLVTTTQL-IPALAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF 447 (468)
T ss_pred ceeEEEEeccch-hHHHHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence 445667777654 2233333345777777754455544 45789999999997 566778999999999999999999
Q ss_pred EEECCCCCchHhHHh
Q psy8912 148 IHSWLMMSSGRLKEA 162 (538)
Q Consensus 148 I~V~~G~~~~~~~~~ 162 (538)
+-+...........+
T Consensus 448 wrI~~h~Dl~~l~~a 462 (468)
T KOG3107|consen 448 WRISSHSDLDALYSA 462 (468)
T ss_pred EeeccCccHHHHhhh
Confidence 988765544443333
No 386
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=85.98 E-value=0.54 Score=46.69 Aligned_cols=46 Identities=28% Similarity=0.209 Sum_probs=27.3
Q ss_pred EEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCc
Q psy8912 20 VFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSE 82 (538)
Q Consensus 20 IFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~ 82 (538)
+||+||||-+.. .......+.|++.++|+.|.+. +..++|+|+.+.
T Consensus 1 ~lDyDGTL~p~~-----------------~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~ 47 (235)
T PF02358_consen 1 FLDYDGTLAPIV-----------------DDPDAAVPPPELRELLRALAADPNNTVAIVSGRSL 47 (235)
T ss_dssp EEE-TTTSS--------------------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-H
T ss_pred CcccCCccCCCC-----------------CCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCH
Confidence 689999996521 1133456788999999999976 447999999977
No 387
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=85.27 E-value=2 Score=43.79 Aligned_cols=91 Identities=16% Similarity=0.100 Sum_probs=58.0
Q ss_pred CCccCCC-HHHHHHHH---HH------CCceEEEEeCCCchHH--HHHHHhhcCCc---cccccceeecCCchHHHHHHH
Q psy8912 421 IIKYYRD-VPAILKYL---KQ------NNCLVAAASRTTEMLR--AHQLVDLFNWN---QHFDHKEIFPGQKTTHFANLK 485 (538)
Q Consensus 421 ~v~l~pG-v~e~L~~L---k~------~GiklaIASss~~~~~--a~~~L~~lgL~---~yFd~~~i~~~~k~~~~~kal 485 (538)
..++-+| ...+|..| ++ .=+++|++|+.+.+.- +..-|+.-|+. -+|- +.-+|.. ++++.
T Consensus 158 ~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFL----gG~~K~~-vL~~~ 232 (264)
T PF06189_consen 158 DKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFL----GGLPKGP-VLKAF 232 (264)
T ss_pred cCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHh----CCCchhH-HHHhh
Confidence 3555555 55555555 33 3468999998887743 33335555543 1222 2223433 34433
Q ss_pred HHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCH
Q psy8912 486 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSH 524 (538)
Q Consensus 486 ~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~ 524 (538)
.| =|||||...+++.|. .++.++.||+|.+.
T Consensus 233 -----~p--hIFFDDQ~~H~~~a~-~~vps~hVP~gv~n 263 (264)
T PF06189_consen 233 -----RP--HIFFDDQDGHLESAS-KVVPSGHVPYGVAN 263 (264)
T ss_pred -----CC--CEeecCchhhhhHhh-cCCCEEeccCCcCC
Confidence 23 499999999999999 99999999999764
No 388
>KOG1605|consensus
Probab=84.83 E-value=0.15 Score=51.95 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=80.3
Q ss_pred CceEEEeCCCCCChhhH--hhhh-chhHHHHHHHHhh--hcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHV--HDLV-APFKKIGQKVMDA--KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~--~~~i-~~~~~~~~~i~~~--~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
-|++++|+|+||..... .... +.+.- .-..+. +.-.+.-.|++-++|...-+. +.+.+.|.+.. ..+..++
T Consensus 89 kk~lVLDLDeTLvHss~~~~~~~~~d~~~--~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~-~Ya~~v~ 164 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSLNLKPIVNADFTV--PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLE-VYADPLL 164 (262)
T ss_pred CceEEEeCCCcccccccccCCCCCcceee--eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhH-HHHHHHH
Confidence 48999999999955431 1100 00000 000011 122345569999999999887 88999999878 8999999
Q ss_pred HHcCC-CCCCcce--eecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCe
Q psy8912 91 NLINL-NQYFSNK--EIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 91 ~~lgL-~~~Fd~i--e~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~ 146 (538)
..+.- ...|... ...+-.++..|.+-+..+|-+.++++.|+|++.-...=-+.|+.
T Consensus 165 D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIp 223 (262)
T KOG1605|consen 165 DILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIP 223 (262)
T ss_pred HHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCc
Confidence 88874 3333322 01111233334444466777889999999999877666677776
No 389
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=84.39 E-value=4.7 Score=40.59 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccH
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNS 505 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I 505 (538)
+.++-+.|+++|+.+-+..|+. .++| +.+. +|..-...+++++++++++++++|||-||+
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~---------------~~ld---ilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~ 194 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNG---------------RDLD---ILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDL 194 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTC---------------CEEE---EEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGH
T ss_pred HHHHHHHHHHcCCCeeEEEccc---------------eeEE---EccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcH
Confidence 3444445667788776664432 2344 4443 788889999999999999999999999998
Q ss_pred HhHcccCCEEEEECCC
Q psy8912 506 HDVSPLGVTCIHVKDG 521 (538)
Q Consensus 506 ~aAk~aGi~~i~V~dg 521 (538)
.-- ..+...|.|.+.
T Consensus 195 ~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 195 EML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHH-CCSSEEEE-TTS
T ss_pred HHH-cCcCCEEEEcCC
Confidence 776 788888888774
No 390
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.98 E-value=1.3 Score=52.13 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=44.4
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNL 92 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~ 92 (538)
-++++||+||||.+..-.. .......+.|++.++|+.|.+. +..|+|+|+.+. ..++..+..
T Consensus 507 ~rll~LDyDGTL~~~~~~~--------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~-~~L~~~~~~ 569 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQ--------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGK-DILDKNFGE 569 (797)
T ss_pred CeEEEEecCccccCCCCCc--------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCH-HHHHHHhCC
Confidence 3689999999997511000 0012356778999999999875 788999999987 777776643
No 391
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=83.67 E-value=0.72 Score=46.76 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=53.5
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILE 277 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.+++.||++|. +|++.+ .|...+..+|.++-+-.+ |+..+. ++.|+.-||++.+|++++-++++.
T Consensus 78 ~~ak~iLEiGT~~GySal-~la~al~~~g~v~tiE~~-~~~~~~-Ar~~~~~ag~~~~I~~~~G~a~e~ 143 (247)
T PLN02589 78 INAKNTMEIGVYTGYSLL-ATALALPEDGKILAMDIN-RENYEL-GLPVIQKAGVAHKIDFREGPALPV 143 (247)
T ss_pred hCCCEEEEEeChhhHHHH-HHHhhCCCCCEEEEEeCC-HHHHHH-HHHHHHHCCCCCceEEEeccHHHH
Confidence 56889999999 999865 466677778988877776 566665 999999999999999999988764
No 392
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.61 E-value=1.3 Score=52.89 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=44.3
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHc
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLI 93 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~l 93 (538)
-++++||+||||.+..-. |. .. ...+ ......+.|++.++|+.|.+. +..|+|+|+.+. ..++..+...
T Consensus 591 ~RLlfLDyDGTLap~~~~---P~-~~-~~~~---~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~-~~Le~~fg~~ 660 (934)
T PLN03064 591 NRLLILGFNATLTEPVDT---PG-RR-GDQI---KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDR-SVLDENFGEF 660 (934)
T ss_pred ceEEEEecCceeccCCCC---cc-cc-cccc---cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCH-HHHHHHhCCC
Confidence 468999999999652100 00 00 0000 011345778899999999875 788999999988 7776666443
No 393
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=82.98 E-value=3.5 Score=45.11 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=71.8
Q ss_pred CccCCC--HHHHHHHhhhCCceEEEEcCCCcH-HHHHHHHHHcCCCCCCcceee-------cCCCCHHHHHHHHHHcCCC
Q psy8912 54 IKYYRG--VPEILRYLKENKCLVAAASRTSEI-LHAKQILNLINLNQYFSNKEI-------YPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 54 ~~l~pg--v~elL~~Lk~~GikiaIvTn~~~p-~~~~~~L~~lgL~~~Fd~ie~-------~~~~Kp~~f~~ale~lgi~ 123 (538)
..++|. ..++.+.+.+.|.+|.++|.---| ...+..|...|.+ |..+.+ ..+.....|..+++.-+++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d--~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPD--FNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCC--ccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 345554 679999999999999999985433 6778888888743 222211 1122237899999999999
Q ss_pred CCcEEEEeCCcc-cHHHHhhcCCeEEEE
Q psy8912 124 YKDMVFFDDEER-NSHDVSPLGVTCIHS 150 (538)
Q Consensus 124 P~e~L~IGDs~~-DI~aAk~aG~~tI~V 150 (538)
|...+.+||... |...++++|+.+...
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHHH
Confidence 999999999965 999999999987544
No 394
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=82.56 E-value=0.76 Score=45.26 Aligned_cols=65 Identities=12% Similarity=0.260 Sum_probs=51.4
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILE 277 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.+++.||++|. .|++.++ |...+.++|.++=.-. -|+..+. ++.|+.-||++.+|++++.++++.
T Consensus 44 ~~~k~vLEIGt~~GySal~-la~~l~~~g~i~tiE~-~~~~~~~-A~~~~~~ag~~~~I~~~~gda~~~ 109 (205)
T PF01596_consen 44 TRPKRVLEIGTFTGYSALW-LAEALPEDGKITTIEI-DPERAEI-ARENFRKAGLDDRIEVIEGDALEV 109 (205)
T ss_dssp HT-SEEEEESTTTSHHHHH-HHHTSTTTSEEEEEES-SHHHHHH-HHHHHHHTTGGGGEEEEES-HHHH
T ss_pred cCCceEEEeccccccHHHH-HHHhhcccceEEEecC-cHHHHHH-HHHHHHhcCCCCcEEEEEeccHhh
Confidence 68999999999 9999664 5566777888776655 4666665 899999999999999999999864
No 395
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=81.43 E-value=5.9 Score=40.18 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=57.1
Q ss_pred hcCCccccccceeecC---CchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHH
Q psy8912 460 LFNWNQHFDHKEIFPG---QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 460 ~lgL~~yFd~~~i~~~---~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~ 527 (538)
.++|..+|....+++. +|..-|.++.+++|-+...-++|||..--.+||+..++.++-|.-..+....
T Consensus 195 Ly~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~~l 265 (274)
T TIGR01658 195 LFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSSHR 265 (274)
T ss_pred HhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHHHh
Confidence 3688899997778877 4555599999999998889999999999999999999999998776555443
No 396
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=79.53 E-value=3.8 Score=41.75 Aligned_cols=48 Identities=17% Similarity=0.262 Sum_probs=40.0
Q ss_pred CchHHHHHHHHHhCCCCCcEEEEecccccHHhHccc---CCEEEEECCCCC
Q psy8912 476 QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKDGMS 523 (538)
Q Consensus 476 ~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~a---Gi~~i~V~dg~t 523 (538)
+|..-..++++.+|+..++++||||..+|+..-+.+ |...|+|.++.+
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~ 224 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGAT 224 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCCC
Confidence 788889999999999999999999999997766554 567788877544
No 397
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=79.25 E-value=6.7 Score=47.77 Aligned_cols=41 Identities=15% Similarity=0.083 Sum_probs=36.8
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~ 464 (538)
+++|++.+.++.|++.|+++-++|.-+ +..|..+-+..||.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~-~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDN-PLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCC
Confidence 589999999999999999999999765 56888889999994
No 398
>PLN02423 phosphomannomutase
Probab=78.56 E-value=2.8 Score=42.08 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=35.1
Q ss_pred CceEE-EeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 16 PKMVV-FDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 16 iKaVI-FDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
++.++ ||+||||.+. .-.+.|.+.++|++|+++ ++++++|+++.
T Consensus 6 ~~~i~~~D~DGTLl~~----------------------~~~i~~~~~~ai~~l~~~-i~fviaTGR~~ 50 (245)
T PLN02423 6 PGVIALFDVDGTLTAP----------------------RKEATPEMLEFMKELRKV-VTVGVVGGSDL 50 (245)
T ss_pred cceEEEEeccCCCcCC----------------------CCcCCHHHHHHHHHHHhC-CEEEEECCcCH
Confidence 56555 9999999861 224567789999999987 99999999855
No 399
>KOG0323|consensus
Probab=77.98 E-value=2.3 Score=48.48 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=58.3
Q ss_pred CCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc-cccccceeecCCchHHHHHHHHHhCCCCCc---
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN-QHFDHKEIFPGQKTTHFANLKKATGIEYKD--- 494 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~-~yFd~~~i~~~~k~~~~~kal~~lgi~pee--- 494 (538)
.+.++|.|++.+||+++.+. |.+-|.|-..+ .+|..+++-+.-. .||.. -|.+.+. ..+.+...-....|..
T Consensus 197 ~~~vKlRP~~~efL~~~skl-femhVyTmg~R-~YA~~i~~liDP~~~lF~d-RIisrde-~~~~kt~dL~~~~p~g~sm 272 (635)
T KOG0323|consen 197 EYLVKLRPFVHEFLKEANKL-FEMHVYTMGTR-DYALEIAKLIDPEGKYFGD-RIISRDE-SPFFKTLDLVLLFPCGDSM 272 (635)
T ss_pred eEEEEeCccHHHHHHHHHhh-ceeEEEeccch-HHHHHHHHHhCCCCccccc-eEEEecC-CCcccccccccCCCCCCcc
Confidence 35588999999999999977 99999998865 5999888877665 47762 4444433 3334444434445555
Q ss_pred EEEEeccccc
Q psy8912 495 MVFFDDEERN 504 (538)
Q Consensus 495 ~l~~eDs~~~ 504 (538)
+++|||+..=
T Consensus 273 vvIIDDr~dV 282 (635)
T KOG0323|consen 273 VVIIDDRSDV 282 (635)
T ss_pred EEEEeCcccc
Confidence 8889998643
No 400
>KOG1605|consensus
Probab=77.05 E-value=0.79 Score=46.85 Aligned_cols=99 Identities=12% Similarity=0.168 Sum_probs=67.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC-ccccccc---eeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW-NQHFDHK---EIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL-~~yFd~~---~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
+..+||+.++|+..-+. +.+.+.|++.+ ..+.+++..+.= ...|..- +.+. .+...|.+-+..+|-+-.++|.
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~-~Ya~~v~D~LD~~~~i~~~RlyR~~C~-~~~g~yvKdls~~~~dL~~viI 206 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLE-VYADPLLDILDPDRKIISHRLYRDSCT-LKDGNYVKDLSVLGRDLSKVII 206 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhH-HHHHHHHHHccCCCCeeeeeecccceE-eECCcEEEEcceeccCcccEEE
Confidence 55689999999998776 88888888864 588889887774 3333200 0000 1222344444667888899999
Q ss_pred EecccccHHhHcccCCEEEEECCCCC
Q psy8912 498 FDDEERNSHDVSPLGVTCIHVKDGMS 523 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~i~V~dg~t 523 (538)
|||++.....=-..|+.+-.-.++.+
T Consensus 207 iDNsP~sy~~~p~NgIpI~sw~~d~~ 232 (262)
T KOG1605|consen 207 VDNSPQSYRLQPENGIPIKSWFDDPT 232 (262)
T ss_pred EcCChHHhccCccCCCcccccccCCC
Confidence 99999887666667777655444444
No 401
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=76.36 E-value=10 Score=38.25 Aligned_cols=51 Identities=6% Similarity=-0.005 Sum_probs=34.7
Q ss_pred cchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC
Q psy8912 411 RDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW 463 (538)
Q Consensus 411 ~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL 463 (538)
++.+........++-||+.++|..|.++ ..-.|+|.|.+. .++...+.+|+
T Consensus 71 ~~dlrr~sE~sa~lvPgA~etm~~l~~~-~tp~v~STSY~q-y~~r~a~~ig~ 121 (315)
T COG4030 71 NRDLRRISELSAKLVPGAEETMATLQER-WTPVVISTSYTQ-YLRRTASMIGV 121 (315)
T ss_pred HHHHHHHHHhhcccCCChHHHHHHHhcc-CCceEEeccHHH-HHHHHHHhcCC
Confidence 3444443334478999999999999987 444455555544 77777777776
No 402
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=75.45 E-value=6.5 Score=39.89 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=67.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce---------------eecCCC------C
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------------EIYPGQ------K 109 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i---------------e~~~~~------K 109 (538)
...+.+.+|+.++++.|+++++++.|+|.+-. ...+.+|++.+. +++.+ ..+.++ |
T Consensus 86 ~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlg-dvI~~vL~q~~~--~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NK 162 (246)
T PF05822_consen 86 ESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLG-DVIEEVLRQAGV--FHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNK 162 (246)
T ss_dssp CS---B-BTHHHHHHHHHCTT--EEEEEEEEH-HHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-H
T ss_pred hcchhhhcCHHHHHHHHHhcCCCEEEEeCCcH-HHHHHHHHHcCC--CCCCeEEEeeeEEECCcceEeecCCCceEEeeC
Confidence 55688999999999999999999999999977 899999999864 33322 111121 1
Q ss_pred HHHHHHHHHHc-CC-CCCcEEEEeCCcccHHHHhhc-CCe---EEEECCCCCchHhHHhhCCCCCCEEEeCCchh
Q psy8912 110 TTHFESLKKAT-GI-EYKDMVFFDDEERNSHDVSPL-GVT---CIHSWLMMSSGRLKEATGIDYKDMIYFDDEQE 178 (538)
Q Consensus 110 p~~f~~ale~l-gi-~P~e~L~IGDs~~DI~aAk~a-G~~---tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~ 178 (538)
.+.-......+ .+ .-.+++.+||+..|+.+|... ... .|++.++. .++.++..... =|.|+.++...
T Consensus 163 n~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~-ve~~l~~Y~~~-yDIVlv~D~tm 235 (246)
T PF05822_consen 163 NESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDK-VEENLEKYLEA-YDIVLVDDQTM 235 (246)
T ss_dssp HHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SS-HHHHHHHHHCC-SSEEEET--B-
T ss_pred CcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccC-HHHHHHHHHhc-CCEEEECCCCc
Confidence 11111001111 22 236799999999999998766 332 45554433 23334444443 47777665433
No 403
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=75.20 E-value=11 Score=45.36 Aligned_cols=99 Identities=10% Similarity=0.004 Sum_probs=70.7
Q ss_pred CCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccc------cc-----------------eeecCC
Q psy8912 420 AIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFD------HK-----------------EIFPGQ 476 (538)
Q Consensus 420 ~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd------~~-----------------~i~~~~ 476 (538)
-+-+++|+|++.++.|++.|+++-+.|.=+ +..|..+-+..|+..-=. +. .++.+-
T Consensus 544 ~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~-~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv 622 (917)
T COG0474 544 IEDPPREDVKEAIEELREAGIKVWMITGDH-VETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV 622 (917)
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEECCCC-HHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc
Confidence 345789999999999999999999999654 669999999999764321 00 011112
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEEEEEC
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
.|++=.++.+.++-.-.-+.+.||..||+-|-|+|.+-+....
T Consensus 623 sP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 623 SPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred CHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 2344345555555555667889999999999999887774443
No 404
>PLN03190 aminophospholipid translocase; Provisional
Probab=74.11 E-value=11 Score=46.48 Aligned_cols=36 Identities=25% Similarity=0.218 Sum_probs=29.9
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHH
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN 91 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~ 91 (538)
++-+|+.++++.|+++|+++.++|+-.. ..+..+..
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~-~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQ-ETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHH
Confidence 5779999999999999999999999765 55555544
No 405
>KOG0204|consensus
Probab=73.53 E-value=12 Score=44.17 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=71.7
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC---CCcce--------------------eecCCCCH
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ---YFSNK--------------------EIYPGQKT 110 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~---~Fd~i--------------------e~~~~~Kp 110 (538)
-.+.||+.+.++.++++|+.+-.+|+.+- ..++++....|+.. -|-.+ .+...+.|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI-~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNI-NTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcH-HHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 45679999999999999999999999877 88999999998742 12211 11112223
Q ss_pred -H--HHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCC
Q psy8912 111 -T--HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDD 175 (538)
Q Consensus 111 -~--~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~ 175 (538)
+ ..-+.+++.| +=+.+-||+.+|-.|-++|.+... =|..-.+ ...+.+|.|+-|+
T Consensus 725 ~DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlA---MGIaGTe----VAKEaSDIIi~DD 782 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLA---MGIAGTE----VAKEASDIIILDD 782 (1034)
T ss_pred chHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchh---ccccchh----hhhhhCCeEEEcC
Confidence 1 1333333222 234568999999999999977532 2222222 2334678888775
No 406
>KOG2469|consensus
Probab=71.88 E-value=5.8 Score=42.84 Aligned_cols=93 Identities=11% Similarity=0.107 Sum_probs=66.9
Q ss_pred CCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc---CCCCCCcceeecCCCCH------------------------
Q psy8912 58 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYPGQKT------------------------ 110 (538)
Q Consensus 58 pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l---gL~~~Fd~ie~~~~~Kp------------------------ 110 (538)
+-...+|..+++.|.++.++||+.- ......+..+ ++..||+.+.... .||
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~-~ytd~~mt~~~~~dW~~yfd~v~~~a-~Kp~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDW-DYTDIFMAFHYGFDWETYFDLVETRA-AKPGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred CccccchHHHHhhccceEEeecccc-chhhHHHHHHhCCCcceeEEEEEEec-cCCccccccceeeeecccccccccccc
Confidence 3344589999999999999999877 6666666543 5778888763321 111
Q ss_pred ------------HHHHHHHHHcCCCCCcEEEEeCCcc-c-HHHHhhcCCeEEEECC
Q psy8912 111 ------------THFESLKKATGIEYKDMVFFDDEER-N-SHDVSPLGVTCIHSWL 152 (538)
Q Consensus 111 ------------~~f~~ale~lgi~P~e~L~IGDs~~-D-I~aAk~aG~~tI~V~~ 152 (538)
..-..+++.+++.-.+++++||... | +..-+.-|+++++|..
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 2256667778888899999999976 5 4455667999988864
No 407
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=70.54 E-value=7.5 Score=41.74 Aligned_cols=49 Identities=22% Similarity=0.112 Sum_probs=37.5
Q ss_pred CCceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH
Q psy8912 15 FPKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI 83 (538)
Q Consensus 15 ~iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p 83 (538)
..++|.||=|+||++. ...+..-.-+..-|-.|-++|++|+|||....+
T Consensus 146 ~L~LvTFDgDvTLY~D--------------------G~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~ 194 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYED--------------------GASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYP 194 (408)
T ss_pred CceEEEEcCCcccccC--------------------CCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 4789999999999872 223344455667777777899999999998763
No 408
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=68.83 E-value=28 Score=42.55 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=35.2
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~ 464 (538)
-+|.|||.++++.|++.|+++-++|.-+ ++.|..+-+..||.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~-~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDK-VETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCc-HHHHHHHHHHhCCC
Confidence 4688999999999999999999999764 55777777767764
No 409
>PLN02476 O-methyltransferase
Probab=67.78 E-value=4 Score=42.15 Aligned_cols=66 Identities=21% Similarity=0.247 Sum_probs=50.3
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILEM 278 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (538)
.+++.||++|+ .|++.+ .|...+..+|-++-+-. -|+..+. ++.|+.-||++.+|++++-++++..
T Consensus 117 ~~ak~VLEIGT~tGySal-~lA~al~~~G~V~TiE~-d~e~~~~-Ar~n~~~aGl~~~I~li~GdA~e~L 183 (278)
T PLN02476 117 LGAERCIEVGVYTGYSSL-AVALVLPESGCLVACER-DSNSLEV-AKRYYELAGVSHKVNVKHGLAAESL 183 (278)
T ss_pred cCCCeEEEecCCCCHHHH-HHHHhCCCCCEEEEEEC-CHHHHHH-HHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 45789999999 888865 45566767776554433 3555554 9999999999999999999887643
No 410
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=67.54 E-value=6.5 Score=42.88 Aligned_cols=118 Identities=18% Similarity=0.091 Sum_probs=66.9
Q ss_pred CceEEEeCCCCCChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHH---HHH--
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK---QIL-- 90 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~---~~L-- 90 (538)
-+.|++|+||||..+-+...+ -.+ ....--.-||..+-...-++||++.-+|+.+. ..+. .-+
T Consensus 375 ~kiVVsDiDGTITkSD~~Ghv-------~~m----iGkdwth~gVAkLYtdI~rNGYkI~YltsR~~-Gqa~sTrsylrn 442 (580)
T COG5083 375 KKIVVSDIDGTITKSDALGHV-------KQM----IGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSY-GQADSTRSYLRN 442 (580)
T ss_pred CcEEEEecCCcEEehhhHHHH-------HHH----hccchhhcchhhhhhhhccCceEEEEEecccc-cchhhhhhHHHh
Confidence 589999999999442211110 000 11111234667777777889999999998754 2221 111
Q ss_pred -HHcCCCCCCcce-------------eecCCCCHHHH----HHHHHHcCCCCCcEE-EEeCCcccHHHHhhcCCe
Q psy8912 91 -NLINLNQYFSNK-------------EIYPGQKTTHF----ESLKKATGIEYKDMV-FFDDEERNSHDVSPLGVT 146 (538)
Q Consensus 91 -~~lgL~~~Fd~i-------------e~~~~~Kp~~f----~~ale~lgi~P~e~L-~IGDs~~DI~aAk~aG~~ 146 (538)
++-|- .+-+.- ...-..+|+.| +.-++.+.+.+.-.+ =||....|+.+-++.|+.
T Consensus 443 ieQngy-kLpdgpviLspd~t~aal~relIlrkpE~FKiayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 443 IEQNGY-KLPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred hhhcCc-cCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 11121 111111 11122467654 444566777776444 489999999999999886
No 411
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=67.09 E-value=32 Score=32.62 Aligned_cols=107 Identities=9% Similarity=0.070 Sum_probs=61.0
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEE
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~ 497 (538)
.|.+-.+.|.+.++++++++.|+.+++.|+...++.+..+++ .|+.+++. +.-....+.+... .|.+...-
T Consensus 69 sGGEPll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~~l~~-~g~~~~v~---isl~~~~~~~~~~---~g~~~~~~-- 139 (191)
T TIGR02495 69 TGGEPTLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLEELLE-EGLVDYVA---MDVKAPPEKYPEL---YGLEKNGS-- 139 (191)
T ss_pred ECCcccCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHHHHHh-cCCCcEEE---EeccCChHHHHHH---HCCCCchH--
Confidence 355666788899999999999999999998876655555544 35434433 2221123334433 24322210
Q ss_pred EecccccHHhHcccCCEE----EEECCCCCHHHHHHHHHHH
Q psy8912 498 FDDEERNSHDVSPLGVTC----IHVKDGMSHSVLHKGLKQW 534 (538)
Q Consensus 498 ~eDs~~~I~aAk~aGi~~----i~V~dg~t~~~~~~~l~~~ 534 (538)
++...+++.+++.|+.+ +.++.-...++.++-.+.+
T Consensus 140 -~~~~~~i~~l~~~gi~~~i~~~v~~~~~~~~ei~~~~~~l 179 (191)
T TIGR02495 140 -NNILKSLEILLRSGIPFELRTTVHRGFLDEEDLAEIATRI 179 (191)
T ss_pred -HHHHHHHHHHHHcCCCEEEEEEEeCCCCCHHHHHHHHHHh
Confidence 45566677777666542 3333444434555444444
No 412
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=66.13 E-value=20 Score=40.17 Aligned_cols=84 Identities=10% Similarity=0.041 Sum_probs=62.6
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEeccc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEE 502 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~ 502 (538)
.++||++|=..+|++.|++.-.+|.-+ +-.+..+-+.-|+++|.- + .+|+.-.+.+++.+-.-.=+-+.||..
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN-~~TAa~IA~EAGVDdfiA--e----atPEdK~~~I~~eQ~~grlVAMtGDGT 519 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDN-PLTAAAIAAEAGVDDFIA--E----ATPEDKLALIRQEQAEGRLVAMTGDGT 519 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHhCchhhhh--c----CChHHHHHHHHHHHhcCcEEEEcCCCC
Confidence 378999999999999999999999876 557777888899988765 3 344443445555555556677899999
Q ss_pred ccHHhHcccCC
Q psy8912 503 RNSHDVSPLGV 513 (538)
Q Consensus 503 ~~I~aAk~aGi 513 (538)
||.-+--+|.+
T Consensus 520 NDAPALAqAdV 530 (681)
T COG2216 520 NDAPALAQADV 530 (681)
T ss_pred Ccchhhhhcch
Confidence 99655444443
No 413
>KOG0202|consensus
Probab=65.70 E-value=21 Score=42.14 Aligned_cols=92 Identities=11% Similarity=0.076 Sum_probs=71.3
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc-------------ccc------------ceeecCC
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH-------------FDH------------KEIFPGQ 476 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y-------------Fd~------------~~i~~~~ 476 (538)
-++.|+|.+-++.+++.|+++-+.|.-+ .+.|+.+-++.|+..+ ||. .....+-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~-~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDN-KETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 4678999999999999999999999776 5599999999998643 331 0112223
Q ss_pred chHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCE
Q psy8912 477 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT 514 (538)
Q Consensus 477 k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~ 514 (538)
.|+|=.++.+.|+-.-+=+-+-||..||.-|-|+|.+-
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 56676778888877777788899999999998887653
No 414
>KOG2832|consensus
Probab=64.20 E-value=25 Score=37.67 Aligned_cols=102 Identities=12% Similarity=0.021 Sum_probs=70.8
Q ss_pred cCCCccceEEeecC----CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHH
Q psy8912 379 SKIKYKDMVFFDDE----ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA 454 (538)
Q Consensus 379 ~~~~~~~l~~~Dld----h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a 454 (538)
+..+-|==||+||. |++-|-..-|+ +.-.|||.-+|.+|. +.|.|.+.|+..-. .+
T Consensus 184 Py~Qp~yTLVleledvLVhpdws~~tGwR------------------f~kRPgvD~FL~~~a-~~yEIVi~sse~gm-t~ 243 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWSYKTGWR------------------FKKRPGVDYFLGHLA-KYYEIVVYSSEQGM-TV 243 (393)
T ss_pred cccCCCceEEEEeeeeEeccchhhhcCce------------------eccCchHHHHHHhhc-ccceEEEEecCCcc-ch
Confidence 45556667888887 66654333333 567799999999998 77999999988654 78
Q ss_pred HHHHhhcCCccccccceeecCC--chHHHHHHHHHhCCCCCcEEEEec
Q psy8912 455 HQLVDLFNWNQHFDHKEIFPGQ--KTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 455 ~~~L~~lgL~~yFd~~~i~~~~--k~~~~~kal~~lgi~pee~l~~eD 500 (538)
.++++.++-..|..+-...... +..+-.+=+.+|+-++..+||||=
T Consensus 244 ~pl~d~lDP~g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~ 291 (393)
T KOG2832|consen 244 FPLLDALDPKGYISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDF 291 (393)
T ss_pred hhhHhhcCCcceEEEEEecCcccccCccchhhhhhhccccceeEEEEc
Confidence 8889888776655532222221 222234456778999999999983
No 415
>KOG4584|consensus
Probab=64.02 E-value=2 Score=44.57 Aligned_cols=257 Identities=17% Similarity=0.202 Sum_probs=145.2
Q ss_pred cccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHHHhhcccccCCcccccccccccccccccccc
Q psy8912 228 SMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILEMIGVARYFDHKEIYPRQKTKHLKKDRVEDA 307 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (538)
|-+|+-|.---+=||+|..-.++|-|+++-.--.+.+-.+..+ .+-|.| -|-|-...||-++|.. .
T Consensus 48 sq~~~~DA~~RAe~F~~~y~~~Le~lk~~P~a~G~~~~g~~Ll---~lRE~~--LrE~gF~Diy~kvK~~---------E 113 (348)
T KOG4584|consen 48 SQENVPDAPARAEKFAQRYAGILEDLKKDPEAYGGPPLGINLL---RLREQI--LRELGFRDIYKKVKDE---------E 113 (348)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHhChHhcCCCcchHHHH---HHHHHH--HHHhCCccHHHHHHHh---------h
Confidence 4566777777788999999999999998766555555554422 222332 2445556788776642 5
Q ss_pred cccccccccchHHHHHHhhhcCcceeeecccc----ccc-hhhhHHhhhCCCcccccccccCcchhhhhhhhcccCcCCC
Q psy8912 308 KGTLLNLYRDIPEIVKYLKDHNIKLALASRTV----HIR-NAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKDSKIK 382 (538)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (538)
|++-.+++|++-..+.+|+++|-.+--.+|-. -|| +|+.+.+.|+.-+.|. |-+. .+..++
T Consensus 114 Na~Aia~fP~vv~~lDal~dE~~Rle~LvrGilAGNiFDwGa~~~~~il~~~~~f~----f~~a----------~~~l~~ 179 (348)
T KOG4584|consen 114 NAKAIALFPQVVRLLDALEDEGTRLENLVRGILAGNIFDWGAKAVVKILESASVFG----FLAA----------LQNLES 179 (348)
T ss_pred hhhHHHHhHHHHHHHhhhcchhHHHHHHHHHHHhcchhhhHHHHHHHHHhccccch----HHHH----------Hhhhhc
Confidence 88889999999999999998884433333321 122 4788888888888886 2111 124578
Q ss_pred ccceEEeecCCCCcCC--C--CCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHH-----
Q psy8912 383 YKDMVFFDDEERNARS--I--SKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLR----- 453 (538)
Q Consensus 383 ~~~l~~~Dldh~~~s~--~--~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~----- 453 (538)
+|||+ =|+| ... + +||+.+- ...|+.|..+-| |+..+.++|-.+|...-++-++. |-.
T Consensus 180 RPWl~-D~ld---~f~~r~~~~p~K~~l------if~DNSG~DvIL--GilPf~Rellr~gt~vil~ans~-palNdvt~ 246 (348)
T KOG4584|consen 180 RPWLV-DDLD---SFLARLKGKPHKCAL------IFVDNSGFDVIL--GILPFARELLRRGTEVILCANSS-PALNDVTY 246 (348)
T ss_pred CCeee-ccHH---HHHHHhcCCCcceEE------EEecCCCcceee--eecHHHHHHHhCCCeEEEEecCc-chhccccH
Confidence 99986 2344 211 1 5888542 234445544333 55555555557888766665442 211
Q ss_pred --HHHHHhhcC-----Ccccccccee---ecCCc-h-HHHHHHHHHhC--CCCCcEEEEecccccHHhHcccCCEEEEEC
Q psy8912 454 --AHQLVDLFN-----WNQHFDHKEI---FPGQK-T-THFANLKKATG--IEYKDMVFFDDEERNSHDVSPLGVTCIHVK 519 (538)
Q Consensus 454 --a~~~L~~lg-----L~~yFd~~~i---~~~~k-~-~~~~kal~~lg--i~pee~l~~eDs~~~I~aAk~aGi~~i~V~ 519 (538)
...++.... +..+.+..+. .++.. + --..+.-+.|. ++-.+.|++|=--+++.+-..|..+|=...
T Consensus 247 ~el~~l~~~~~~~~~~l~~~~~~~~ll~~~~G~~~pciDlrrvsqeLa~l~~daDLVViEGMGRalhTN~~aqf~CeSLK 326 (348)
T KOG4584|consen 247 SELKELAAELANDCNVLLKAIDTGQLLVVQNGQDSPCIDLRRVSQELAYLSSDADLVVIEGMGRALHTNLNAQFKCESLK 326 (348)
T ss_pred HHHHHHHHhhccCChHHHHHhhhcceEEeecCCCCceeeHHhhhHHHHHHhcCCCEEEEeccchhhhhhhhhhhcccHhH
Confidence 111222211 1223331111 11110 0 00122222221 225678899988888888777777774444
Q ss_pred CCCCHH
Q psy8912 520 DGMSHS 525 (538)
Q Consensus 520 dg~t~~ 525 (538)
-++...
T Consensus 327 ~avik~ 332 (348)
T KOG4584|consen 327 LAVIKN 332 (348)
T ss_pred HHHHhh
Confidence 344333
No 416
>KOG2116|consensus
Probab=61.80 E-value=12 Score=42.87 Aligned_cols=119 Identities=20% Similarity=0.188 Sum_probs=67.8
Q ss_pred CceEEEeCCCCCChhhHhhhh-chhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcH--HHHHHHHHH
Q psy8912 16 PKMVVFDLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNL 92 (538)
Q Consensus 16 iKaVIFDlDGTLw~~~~~~~i-~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p--~~~~~~L~~ 92 (538)
-|.||=|+|||+...-+.-++ |-+.. -=-.-|+..+....+++||++..+|...-. ...+..|..
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGk------------DWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~n 597 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGK------------DWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKN 597 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcC------------cchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHH
Confidence 378999999999543322111 11111 112468899999999999999999986431 233334443
Q ss_pred cCCC--CCCcceeec-C------------CCCHHHHHH-----HHHHcCCCCCcEEE--EeCCcccHHHHhhcCCeE
Q psy8912 93 INLN--QYFSNKEIY-P------------GQKTTHFES-----LKKATGIEYKDMVF--FDDEERNSHDVSPLGVTC 147 (538)
Q Consensus 93 lgL~--~~Fd~ie~~-~------------~~Kp~~f~~-----ale~lgi~P~e~L~--IGDs~~DI~aAk~aG~~t 147 (538)
+.=+ .+-+.-.+. | .++|+-|+- +.+.+. +-.+-.| ||.+..|+..-++.|+..
T Consensus 598 v~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 598 VEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNLFP-PSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred HhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHhcC-CCCCceeeecCCCcccceeeeeecCCc
Confidence 3211 111211111 1 135554443 334444 2233333 899999999999999863
No 417
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=61.02 E-value=24 Score=36.86 Aligned_cols=40 Identities=13% Similarity=0.039 Sum_probs=32.6
Q ss_pred hcCCCccCCCHHHHHHHhhhCC-ceEEEEcCCCcHHHHHHHH
Q psy8912 50 KGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 50 ~~~~~~l~pgv~elL~~Lk~~G-ikiaIvTn~~~p~~~~~~L 90 (538)
......+||...++++.+|+.| ++++++||++. +.+...|
T Consensus 87 ~~GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl-pdv~~~L 127 (296)
T COG0731 87 LSGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL-PDVLEEL 127 (296)
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEeCCCh-HHHHHHh
Confidence 3567889999999999999999 79999999977 3333333
No 418
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=60.16 E-value=52 Score=31.18 Aligned_cols=115 Identities=12% Similarity=0.145 Sum_probs=66.0
Q ss_pred eEEeecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCch--HHHHHHHhhc-
Q psy8912 386 MVFFDDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEM--LRAHQLVDLF- 461 (538)
Q Consensus 386 l~~~Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~--~~a~~~L~~l- 461 (538)
++|+|.| -...|++ ++.+ ...-|.. ...|||.++.+.++++||++--+|+-+.. ...+..|+..
T Consensus 1 VVvsDIDGTiT~SD~--~G~i---------~~~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~ 68 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV--LGHI---------LPILGKD-WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQ 68 (157)
T ss_pred CEEEeccCCcCccch--hhhh---------hhccCch-hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHH
Confidence 4788888 5555543 2211 1112222 57899999999999999999999976522 2455566655
Q ss_pred ----CCccccccceeec-------------CCchHHHH-HHHHHhC-C--CCCcEEE--EecccccHHhHcccCCEE
Q psy8912 462 ----NWNQHFDHKEIFP-------------GQKTTHFA-NLKKATG-I--EYKDMVF--FDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 462 ----gL~~yFd~~~i~~-------------~~k~~~~~-kal~~lg-i--~pee~l~--~eDs~~~I~aAk~aGi~~ 515 (538)
+|- ++....+ ..+++.|+ .+++.+. . ....-++ ||++..|+.+=+++|+..
T Consensus 69 q~~~~lP---~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 69 QQGHNLP---DGPVLLSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred hCCccCC---CCCEEECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence 221 1111111 12344432 1222221 1 1122222 999999999999998853
No 419
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=59.93 E-value=17 Score=40.45 Aligned_cols=33 Identities=3% Similarity=0.109 Sum_probs=27.6
Q ss_pred HHHHhhhCCceEEEEcCCCcHHHHHHHHHH-cCCCC
Q psy8912 63 ILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQ 97 (538)
Q Consensus 63 lL~~Lk~~GikiaIvTn~~~p~~~~~~L~~-lgL~~ 97 (538)
.++..++.| +++++|.+++ .+++..++. +|.+.
T Consensus 101 ~~~~~~~~g-~~vVVTAsPr-vmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPR-VMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHH-HHHHHHHHHhcCCce
Confidence 556667788 9999999999 999999998 77653
No 420
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=59.43 E-value=41 Score=37.95 Aligned_cols=101 Identities=10% Similarity=0.098 Sum_probs=62.4
Q ss_pred CCCHHHHHHHH---HHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 425 YRDVPAILKYL---KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 425 ~pGv~e~L~~L---k~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
.....++|+.| +..+-++|+++-.+...-++.+-+.+++. ++...+.+..+++.-.+-+++.|+ -++|||.
T Consensus 80 ~~s~~Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~~~~l~~~G~----~~viG~~ 153 (526)
T TIGR02329 80 KPTGFDVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEEDARSCVNDLRARGI----GAVVGAG 153 (526)
T ss_pred cCChhhHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEECCh
Confidence 44444555444 56667999998876554555555555553 222123334555555555566666 4677998
Q ss_pred cccHHhHcccCCEEEEECCCCCH-HHHHHHHH
Q psy8912 502 ERNSHDVSPLGVTCIHVKDGMSH-SVLHKGLK 532 (538)
Q Consensus 502 ~~~I~aAk~aGi~~i~V~dg~t~-~~~~~~l~ 532 (538)
.. ...|+++|+..|.++.+-+. ..++++++
T Consensus 154 ~~-~~~A~~~gl~~ili~s~esi~~a~~~A~~ 184 (526)
T TIGR02329 154 LI-TDLAEQAGLHGVFLYSADSVRQAFDDALD 184 (526)
T ss_pred HH-HHHHHHcCCceEEEecHHHHHHHHHHHHH
Confidence 55 79999999999999886332 23444444
No 421
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=58.31 E-value=55 Score=31.83 Aligned_cols=109 Identities=14% Similarity=0.005 Sum_probs=67.0
Q ss_pred HHHHhhhCCceEEEEcCC-C-----------cHHHHHHHHHHcCCCCCCcceeecCCCCH---HHHHHHHHHcCCCCCcE
Q psy8912 63 ILRYLKENKCLVAAASRT-S-----------EILHAKQILNLINLNQYFSNKEIYPGQKT---THFESLKKATGIEYKDM 127 (538)
Q Consensus 63 lL~~Lk~~GikiaIvTn~-~-----------~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp---~~f~~ale~lgi~P~e~ 127 (538)
++..+++.|+.+..++.. + ..+.++...+.+|+....-. . +...+ ..+..+++++.-.--+.
T Consensus 15 al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~--~-~~~~e~~~~~l~~~l~~~~~~g~~~ 91 (194)
T cd01994 15 ALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIE--I-SGEEEDEVEDLKELLRKLKEEGVDA 91 (194)
T ss_pred HHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEe--C-CCCchHHHHHHHHHHHHHHHcCCCE
Confidence 344556678775544422 0 11466677788887643221 1 22333 23333343333223478
Q ss_pred EEEeCCcccH------HHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeC
Q psy8912 128 VFFDDEERNS------HDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFD 174 (538)
Q Consensus 128 L~IGDs~~DI------~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d 174 (538)
++.||...|. ..+.++|+.++.-.|+...++.++.+...+-..++..
T Consensus 92 vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~~~~~~ll~e~~~~g~~~~iv~ 144 (194)
T cd01994 92 VVFGAILSEYQRTRVERVCERLGLEPLAPLWGRDQEELLREMIEAGFKAIIIK 144 (194)
T ss_pred EEECccccHHHHHHHHHHHHHcCCEEEecccCCCHHHHHHHHHHcCCeEEEEE
Confidence 9999997664 4567789999999999999888888777777766643
No 422
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=57.81 E-value=7.9 Score=38.68 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=48.9
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHH
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILE 277 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
...+.||++|+ .|++.+ +|...+..+|-++=+-.+ |+..+. ++.|+.-++++.+|++++.++++.
T Consensus 67 ~~~~~vLEiGt~~G~s~l-~la~~~~~~g~v~tiD~d-~~~~~~-A~~n~~~~gl~~~i~~~~gda~~~ 132 (234)
T PLN02781 67 MNAKNTLEIGVFTGYSLL-TTALALPEDGRITAIDID-KEAYEV-GLEFIKKAGVDHKINFIQSDALSA 132 (234)
T ss_pred hCCCEEEEecCcccHHHH-HHHHhCCCCCEEEEEECC-HHHHHH-HHHHHHHcCCCCcEEEEEccHHHH
Confidence 45788999999 887644 455556667765554444 566665 899999999999999999988764
No 423
>KOG2470|consensus
Probab=57.66 E-value=14 Score=39.45 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=62.4
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh---cCCccccccceeecCCchHH------------------
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL---FNWNQHFDHKEIFPGQKTTH------------------ 480 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~---lgL~~yFd~~~i~~~~k~~~------------------ 480 (538)
+.--|....+|+.|+++|-++-+.|+|+-. .+..-++. -.+.+.||. +|...+||+.
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPys-FVd~GM~flvG~~WRdlFDV-VIvqA~KP~Fftde~rPfR~~dek~~sl 316 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYS-FVDKGMRFLVGDDWRDLFDV-VIVQANKPEFFTDERRPFRKYDEKRGSL 316 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchh-hhhcCceeeeCccHHhhhhe-eEEecCCCcccccccCcchhhcccccch
Confidence 334578899999999999999999998743 44433332 245578883 3333322211
Q ss_pred ------------------HHHHHHHhCCCCCcEEEEecccc-cHHhHc-ccCCEEEEECC
Q psy8912 481 ------------------FANLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKD 520 (538)
Q Consensus 481 ------------------~~kal~~lgi~pee~l~~eDs~~-~I~aAk-~aGi~~i~V~d 520 (538)
....++-.|..-.+++||||-.+ |+.... ++|-.+-+|-.
T Consensus 317 ~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 317 LWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 24445556888899999999865 344443 46666666543
No 424
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=57.14 E-value=76 Score=31.77 Aligned_cols=111 Identities=9% Similarity=0.133 Sum_probs=63.3
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC---Cc--hHH---HHHHHHHhCCCCC
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG---QK--TTH---FANLKKATGIEYK 493 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~---~k--~~~---~~kal~~lgi~pe 493 (538)
..-+.+.++|++.|+.|++-|++=+-.+| +..+.+|+...+--... ..++ .+ ++. +.++.+..+-.-
T Consensus 93 E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMs---VnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~- 168 (220)
T COG0036 93 EATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMS---VNPGFGGQKFIPEVLEKIRELRAMIDERL- 168 (220)
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEe---ECCCCcccccCHHHHHHHHHHHHHhcccC-
Confidence 35689999999999999999998765555 24455565444322111 2222 11 222 222222222211
Q ss_pred cEEE-Eeccccc--HHhHcccCCEEEEECCC-CCHHHHHHHHHHHHhc
Q psy8912 494 DMVF-FDDEERN--SHDVSPLGVTCIHVKDG-MSHSVLHKGLKQWASK 537 (538)
Q Consensus 494 e~l~-~eDs~~~--I~aAk~aGi~~i~V~dg-~t~~~~~~~l~~~~~~ 537 (538)
++.. ||=+.+. +..+.+||+.++-..-. +..+++.+.+..|+..
T Consensus 169 ~~~IeVDGGI~~~t~~~~~~AGad~~VaGSalF~~~d~~~~i~~~~~~ 216 (220)
T COG0036 169 DILIEVDGGINLETIKQLAAAGADVFVAGSALFGADDYKATIRELRGE 216 (220)
T ss_pred CeEEEEeCCcCHHHHHHHHHcCCCEEEEEEEEeCCccHHHHHHHHHHH
Confidence 4544 5544433 34444589998877554 4444588888888763
No 425
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=55.28 E-value=10 Score=37.89 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=53.8
Q ss_pred cccchhhcccc-eeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEeh-hhHHHHhh-cccccC
Q psy8912 210 RNARSISKLGV-IGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHV-QNILEMIG-VARYFD 286 (538)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~ 286 (538)
.+.+.||++|. +|++-+. |.+.+..||-.+-.-++ |+-.+. ++.|+.-||++.+|+.++. ++++..-. -.-.||
T Consensus 58 ~~~k~iLEiGT~~GySal~-mA~~l~~~g~l~tiE~~-~e~~~~-A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fD 134 (219)
T COG4122 58 SGPKRILEIGTAIGYSALW-MALALPDDGRLTTIERD-EERAEI-ARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFD 134 (219)
T ss_pred cCCceEEEeecccCHHHHH-HHhhCCCCCeEEEEeCC-HHHHHH-HHHHHHHcCCcceEEEEecCcHHHHHHhccCCCcc
Confidence 47889999999 9999554 66666668854443332 444444 9999999999999999994 77766652 334566
Q ss_pred C
Q psy8912 287 H 287 (538)
Q Consensus 287 ~ 287 (538)
-
T Consensus 135 l 135 (219)
T COG4122 135 L 135 (219)
T ss_pred E
Confidence 3
No 426
>KOG3128|consensus
Probab=55.15 E-value=27 Score=35.71 Aligned_cols=92 Identities=11% Similarity=0.083 Sum_probs=58.5
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHc-CCCC-------CCcce--eecCC-CCH---------
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-NLNQ-------YFSNK--EIYPG-QKT--------- 110 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~l-gL~~-------~Fd~i--e~~~~-~Kp--------- 110 (538)
...+.+..|..++...|+++++++.|+|.+-. ...+.++.+. ++.. |.++- ....+ ++|
T Consensus 134 ~s~i~lReg~~~ff~~L~~~~IP~~iFSAGig-diiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~ 212 (298)
T KOG3128|consen 134 ESNIALREGYEEFFEALQAHEIPLLIFSAGIG-DIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNS 212 (298)
T ss_pred HhhHHHHHHHHHHHHHHHhCCCceEEEecchH-HHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccch
Confidence 34455678899999999999999999999877 6677766544 3321 11111 11111 122
Q ss_pred HHHHHHHHHcCC--CCCcEEEEeCCcccHHHHhhc
Q psy8912 111 THFESLKKATGI--EYKDMVFFDDEERNSHDVSPL 143 (538)
Q Consensus 111 ~~f~~ale~lgi--~P~e~L~IGDs~~DI~aAk~a 143 (538)
...+...+.+.. .-..+++.||+..|+.+|..+
T Consensus 213 ~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 213 SVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 123333444432 347889999999999988654
No 427
>KOG3107|consensus
Probab=54.79 E-value=48 Score=35.82 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=67.5
Q ss_pred CCceEEEEeCCC-chHHHHHHHhhcCCccccccceeecCCc---hHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCC
Q psy8912 438 NNCLVAAASRTT-EMLRAHQLVDLFNWNQHFDHKEIFPGQK---TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV 513 (538)
Q Consensus 438 ~GiklaIASss~-~~~~a~~~L~~lgL~~yFd~~~i~~~~k---~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi 513 (538)
.++.-.++|++. .+..|+ +=.+||...|....|++..| ..-|+++.+++|- .-.-|+|+|..--..+||+..+
T Consensus 369 ~ncvnVlvTttqLipalaK--vLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 369 KNCVNVLVTTTQLIPALAK--VLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred cceeEEEEeccchhHHHHH--HHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence 345455666552 122222 33468889998777777744 4449999999997 5667889999888999999999
Q ss_pred EEEEECCCCCHHHHHHHHHH
Q psy8912 514 TCIHVKDGMSHSVLHKGLKQ 533 (538)
Q Consensus 514 ~~i~V~dg~t~~~~~~~l~~ 533 (538)
.++-+.-..+......+|+.
T Consensus 446 PfwrI~~h~Dl~~l~~aL~~ 465 (468)
T KOG3107|consen 446 PFWRISSHSDLDALYSALEL 465 (468)
T ss_pred ceEeeccCccHHHHhhhccc
Confidence 99999887777776666654
No 428
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=53.65 E-value=35 Score=33.98 Aligned_cols=108 Identities=11% Similarity=0.188 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC--C-c-----hHHHHHHHHHhCCCCCcE-
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG--Q-K-----TTHFANLKKATGIEYKDM- 495 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~--~-k-----~~~~~kal~~lgi~pee~- 495 (538)
+...++|+++|+.|++.|+|-+-.++ +..+.+|+.. +++-.....++ . + .+.+.++.+...-..-++
T Consensus 93 ~~~~~~l~~ik~~g~k~GlalnP~Tp~~~i~~~l~~~---D~vlvMtV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~ 169 (220)
T PRK08883 93 EHVDRTLQLIKEHGCQAGVVLNPATPLHHLEYIMDKV---DLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIR 169 (220)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC---CeEEEEEecCCCCCceecHhHHHHHHHHHHHHHhcCCCee
Confidence 56889999999999999999876655 2334444433 33332222222 1 1 122333322221111123
Q ss_pred EEEecc--cccHHhHcccCCEEEEECCCC-CHHHHHHHHHHHHh
Q psy8912 496 VFFDDE--ERNSHDVSPLGVTCIHVKDGM-SHSVLHKGLKQWAS 536 (538)
Q Consensus 496 l~~eDs--~~~I~aAk~aGi~~i~V~dg~-t~~~~~~~l~~~~~ 536 (538)
+.+|=. ..++....++|+..+.+-.++ ..++..+.++++++
T Consensus 170 I~vdGGI~~eni~~l~~aGAd~vVvGSaIf~~~d~~~~i~~l~~ 213 (220)
T PRK08883 170 LEIDGGVKVDNIREIAEAGADMFVAGSAIFGQPDYKAVIDEMRA 213 (220)
T ss_pred EEEECCCCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 334322 234566677999999887653 34456777777664
No 429
>PTZ00174 phosphomannomutase; Provisional
Probab=52.82 E-value=16 Score=36.49 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeC----CcccHHHHhhcCCeEEEECC
Q psy8912 108 QKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 108 ~Kp~~f~~ale~lgi~P~e~L~IGD----s~~DI~aAk~aG~~tI~V~~ 152 (538)
.|......+++. ++++++||| +.+|+.+-+.+|..++.|.+
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 577778888887 699999999 89999999988888788863
No 430
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=51.94 E-value=95 Score=30.69 Aligned_cols=108 Identities=10% Similarity=-0.036 Sum_probs=62.6
Q ss_pred HHHHhhhCCceE-EEEcCC-----------CcHHHHHHHHHHcCCCCCCcceeecCCCCH---HHHHHHHHHcCCCCCcE
Q psy8912 63 ILRYLKENKCLV-AAASRT-----------SEILHAKQILNLINLNQYFSNKEIYPGQKT---THFESLKKATGIEYKDM 127 (538)
Q Consensus 63 lL~~Lk~~Giki-aIvTn~-----------~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp---~~f~~ale~lgi~P~e~ 127 (538)
++..+++.|+.+ +++|-. ...+.++...+.+|+....-. .+...+ +.+..++.+.--..-+.
T Consensus 13 al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~---~~~~~~~~~~~l~~~l~~~~~~g~~~ 89 (218)
T TIGR03679 13 ALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIE---TSGEKEKEVEDLKGALKELKREGVEG 89 (218)
T ss_pred HHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEE---CCCCChHHHHHHHHHHHHHHHcCCCE
Confidence 345566788887 454511 111566777788887643211 121111 22333333321113478
Q ss_pred EEEeCCcccH------HHHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEe
Q psy8912 128 VFFDDEERNS------HDVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYF 173 (538)
Q Consensus 128 L~IGDs~~DI------~aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~ 173 (538)
+++||...|. ..+..+|+..+.-.|+....+..+.....+-+.++.
T Consensus 90 vv~G~i~sd~~~~~~e~v~~~~gl~~~~PLw~~~~~el~~~~~~~G~~~~i~ 141 (218)
T TIGR03679 90 IVTGAIASRYQKSRIERICEELGLKVFAPLWGRDQEEYLRELVERGFRFIIV 141 (218)
T ss_pred EEECCcccHhHHHHHHHHHHhCCCeEEeehhcCCHHHHHHHHHHCCCEEEEE
Confidence 9999987654 455667999888889988887777666555555553
No 431
>KOG0206|consensus
Probab=51.55 E-value=45 Score=40.97 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=29.9
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHH
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL 90 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L 90 (538)
+-++-+||.+.++.|+++|+|++++|+-.. +.+-.+.
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK~-ETAiNIg 685 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDKQ-ETAINIG 685 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcHH-HHHHHHH
Confidence 456789999999999999999999999755 4444433
No 432
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=51.24 E-value=17 Score=37.90 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=28.5
Q ss_pred cccccchHHHHHHhhhcC-cceeeeccccccch
Q psy8912 312 LNLYRDIPEIVKYLKDHN-IKLALASRTVHIRN 343 (538)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (538)
|.|||+..++++.+|+.| ++.+|++.+-.++.
T Consensus 91 PTLy~~L~elI~~~k~~g~~~tflvTNgslpdv 123 (296)
T COG0731 91 PTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDV 123 (296)
T ss_pred cccccCHHHHHHHHHhcCCceEEEEeCCChHHH
Confidence 899999999999999999 79999998876443
No 433
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=49.52 E-value=96 Score=31.20 Aligned_cols=106 Identities=12% Similarity=0.193 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHCCc--eEEEEeCCCch-HHHHHHHhhcCCccccccceeecC---C--------chHHHHHHHHHhCCC
Q psy8912 426 RDVPAILKYLKQNNC--LVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG---Q--------KTTHFANLKKATGIE 491 (538)
Q Consensus 426 pGv~e~L~~Lk~~Gi--klaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~---~--------k~~~~~kal~~lgi~ 491 (538)
+...++|+++|+.|. +.|+|=+-.++ +..+.+|.. -++.-.....++ . |.....+..++.|+
T Consensus 103 ~~~~~~l~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~---vD~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~- 178 (228)
T PRK08091 103 HDLALTIEWLAKQKTTVLIGLCLCPETPISLLEPYLDQ---IDLIQILTLDPRTGTKAPSDLILDRVIQVENRLGNRRV- 178 (228)
T ss_pred ccHHHHHHHHHHCCCCceEEEEECCCCCHHHHHHHHhh---cCEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCC-
Confidence 568899999999999 99998765554 233444443 333222222222 1 22222233333232
Q ss_pred CCcEEEEeccccc--HHhHcccCCEEEEECCCC-CHHHHHHHHHHHHh
Q psy8912 492 YKDMVFFDDEERN--SHDVSPLGVTCIHVKDGM-SHSVLHKGLKQWAS 536 (538)
Q Consensus 492 pee~l~~eDs~~~--I~aAk~aGi~~i~V~dg~-t~~~~~~~l~~~~~ 536 (538)
+--|.+|=..+. +..+.++|++++-+..++ ..++.++.++.|+.
T Consensus 179 -~~~IeVDGGI~~~ti~~l~~aGaD~~V~GSalF~~~d~~~~i~~l~~ 225 (228)
T PRK08091 179 -EKLISIDGSMTLELASYLKQHQIDWVVSGSALFSQGELKTTLKEWKS 225 (228)
T ss_pred -CceEEEECCCCHHHHHHHHHCCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 333667765553 444566999987665543 34457788888765
No 434
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=48.62 E-value=1.2e+02 Score=30.85 Aligned_cols=99 Identities=9% Similarity=-0.004 Sum_probs=65.7
Q ss_pred cCCCccCCCHHHHHHHhhhC---CceEE-EEcCCCcHHHHHHHHHHcCCCCCCc---cee-ecCCCCHHHHHHHHHHcCC
Q psy8912 51 GTLIKYYRGVPEILRYLKEN---KCLVA-AASRTSEILHAKQILNLINLNQYFS---NKE-IYPGQKTTHFESLKKATGI 122 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~---Gikia-IvTn~~~p~~~~~~L~~lgL~~~Fd---~ie-~~~~~Kp~~f~~ale~lgi 122 (538)
.+.-.++|+..++++..+.. |+.+. ++++.. . ..+.+..+|-.-... .|. ..+-..|+.++.+.+..++
T Consensus 100 ~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~--~-~ar~l~~~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~v 176 (248)
T cd04728 100 GDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDP--V-LAKRLEDAGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADV 176 (248)
T ss_pred cCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCH--H-HHHHHHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCC
Confidence 45567899999999988877 99999 555552 3 445555666432211 111 1112357777777766443
Q ss_pred CCCcEEEEeCC---cccHHHHhhcCCeEEEECCCCCc
Q psy8912 123 EYKDMVFFDDE---ERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 123 ~P~e~L~IGDs---~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
.+++|=+ +.|+..|.++|...+.|+++...
T Consensus 177 ----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 177 ----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 4666654 56899999999999999987653
No 435
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=47.33 E-value=23 Score=33.70 Aligned_cols=89 Identities=21% Similarity=0.158 Sum_probs=49.5
Q ss_pred cCCCHHHHHHHh---hhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHH---HcCCCCCcEEE
Q psy8912 56 YYRGVPEILRYL---KENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKK---ATGIEYKDMVF 129 (538)
Q Consensus 56 l~pgv~elL~~L---k~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale---~lgi~P~e~L~ 129 (538)
+-....++|+.| +..|-++++++..+.......+.+.+|+. +..+.-..++-+..+++ .-|+ -++
T Consensus 59 I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----i~~~~~~~~~e~~~~i~~~~~~G~----~vi 129 (176)
T PF06506_consen 59 IPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----IKIYPYDSEEEIEAAIKQAKAEGV----DVI 129 (176)
T ss_dssp E---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----EEEEEESSHHHHHHHHHHHHHTT------EE
T ss_pred ECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----eEEEEECCHHHHHHHHHHHHHcCC----cEE
Confidence 344555555554 55678999998765523356666666652 11112223433333333 3454 567
Q ss_pred EeCCcccHHHHhhcCCeEEEECCCC
Q psy8912 130 FDDEERNSHDVSPLGVTCIHSWLMM 154 (538)
Q Consensus 130 IGDs~~DI~aAk~aG~~tI~V~~G~ 154 (538)
||+... ...|++.|++++.+.+|.
T Consensus 130 VGg~~~-~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 130 VGGGVV-CRLARKLGLPGVLIESGE 153 (176)
T ss_dssp EESHHH-HHHHHHTTSEEEESS--H
T ss_pred ECCHHH-HHHHHHcCCcEEEEEecH
Confidence 999865 689999999999987654
No 436
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=47.16 E-value=1.2e+02 Score=29.56 Aligned_cols=58 Identities=21% Similarity=0.280 Sum_probs=39.3
Q ss_pred CchHHHHHHHHHhCC----CCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHH
Q psy8912 476 QKTTHFANLKKATGI----EYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWA 535 (538)
Q Consensus 476 ~k~~~~~kal~~lgi----~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~ 535 (538)
.-++.|.+.+...+. ..-.++.+|.... +++++.|...+.++...+.+..-+.+.++.
T Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~aiG~~Ta--~~l~~~G~~~~~~~~~~~~~~l~~~l~~~~ 248 (249)
T PRK05928 187 STVRAFFSLAPELGRREWLLSCKAVVIGERTA--EALRELGIKVIIVPDSADNEALLRALKELL 248 (249)
T ss_pred HHHHHHHHHhcccchhHHHhCCeEEEeCHHHH--HHHHHcCCCcceecCCCChHHHHHHHHHhc
Confidence 445555555544432 1334566776554 567789999999999999988888887763
No 437
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=46.14 E-value=98 Score=35.10 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=55.9
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
+...|..+++.+-++|+++-.+...-++.+-+.+++. +....+.+..+.+.-.+-+++.|+ -++|||... ++.
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~~~~-~~~ 168 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKANGI----EAVVGAGLI-TDL 168 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEEcCchH-HHH
Confidence 3334444456677999999876554555555555543 121123333555555556666676 467788666 799
Q ss_pred HcccCCEEEEECCC
Q psy8912 508 VSPLGVTCIHVKDG 521 (538)
Q Consensus 508 Ak~aGi~~i~V~dg 521 (538)
|+++|+..+.++.+
T Consensus 169 A~~~g~~g~~~~s~ 182 (538)
T PRK15424 169 AEEAGMTGIFIYSA 182 (538)
T ss_pred HHHhCCceEEecCH
Confidence 99999999999865
No 438
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=45.80 E-value=1.1e+02 Score=32.44 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=65.7
Q ss_pred cCCCccCCCHHHHHHHhhhC---CceEEEEcCCCcHHHHHHHHHHcCCCCCCc---cee-ecCCCCHHHHHHHHHHcCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKEN---KCLVAAASRTSEILHAKQILNLINLNQYFS---NKE-IYPGQKTTHFESLKKATGIE 123 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~---GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd---~ie-~~~~~Kp~~f~~ale~lgi~ 123 (538)
.+.-.++|+..++++..+.. |+.+.++++.+- . ..+.+..+|-..... .|. ..+-.+|+.++.+.+...+
T Consensus 174 ~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~-~-~a~~l~~~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~v- 250 (326)
T PRK11840 174 GDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDP-I-AAKRLEDAGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGATV- 250 (326)
T ss_pred CCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCH-H-HHHHHHhcCCEEEeeccccccCCCCCCCHHHHHHHHHcCCC-
Confidence 55567889999999988877 999955554423 3 445555566311111 110 0112378888888887443
Q ss_pred CCcEEEEeCC---cccHHHHhhcCCeEEEECCCCC
Q psy8912 124 YKDMVFFDDE---ERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 124 P~e~L~IGDs---~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
-+++|-+ +.|+..|-++|+..++++++..
T Consensus 251 ---pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 251 ---PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 5667765 4699999999999999998764
No 439
>PLN02334 ribulose-phosphate 3-epimerase
Probab=45.34 E-value=1.3e+02 Score=29.64 Aligned_cols=109 Identities=6% Similarity=-0.002 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC-Cc----hHHHHHH--HHHhCCCCCcEEE
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG-QK----TTHFANL--KKATGIEYKDMVF 497 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~-~k----~~~~~ka--l~~lgi~pee~l~ 497 (538)
+...+.++++++.|.++|++....++ +.++..++. |--+|+-...+.++ .+ +..+.++ ++++.. .-.+++
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~-~~~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~-~~~I~a 179 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEK-GLVDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYP-ELDIEV 179 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhc-cCCCEEEEEEEecCCCccccCHHHHHHHHHHHHhCC-CCcEEE
Confidence 34678899999999999999963222 234434332 11466643334432 11 1222222 222211 123444
Q ss_pred E-ecccccHHhHcccCCEEEEECCCCC-HHHHHHHHHHHHh
Q psy8912 498 F-DDEERNSHDVSPLGVTCIHVKDGMS-HSVLHKGLKQWAS 536 (538)
Q Consensus 498 ~-eDs~~~I~aAk~aGi~~i~V~dg~t-~~~~~~~l~~~~~ 536 (538)
. |=+..++....++|+..+.|-..+. .++..+.+++|++
T Consensus 180 ~GGI~~e~i~~l~~aGad~vvvgsai~~~~d~~~~~~~l~~ 220 (229)
T PLN02334 180 DGGVGPSTIDKAAEAGANVIVAGSAVFGAPDYAEVISGLRA 220 (229)
T ss_pred eCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 4 3456678888899999999977643 3467777777764
No 440
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=44.85 E-value=34 Score=31.13 Aligned_cols=28 Identities=14% Similarity=-0.032 Sum_probs=24.7
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCc
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTE 450 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~ 450 (538)
.+.+++.+.|+.|+++|+.+.+||+.+.
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 4678999999999999999999997754
No 441
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=44.84 E-value=82 Score=35.56 Aligned_cols=87 Identities=9% Similarity=0.077 Sum_probs=54.2
Q ss_pred HHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q psy8912 60 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHD 139 (538)
Q Consensus 60 v~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~a 139 (538)
+...|..++..+-++++++-.+....++.+...+++. +.............-..-+++-|+ -++|||... ...
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~~~~l~~~G~----~~viG~~~~-~~~ 158 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEEDARSCVNDLRARGI----GAVVGAGLI-TDL 158 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEECChHH-HHH
Confidence 4445555566677899998765535666666667653 111111122222333333455566 567899965 688
Q ss_pred HhhcCCeEEEECCC
Q psy8912 140 VSPLGVTCIHSWLM 153 (538)
Q Consensus 140 Ak~aG~~tI~V~~G 153 (538)
|+++|+.++.+.++
T Consensus 159 A~~~gl~~ili~s~ 172 (526)
T TIGR02329 159 AEQAGLHGVFLYSA 172 (526)
T ss_pred HHHcCCceEEEecH
Confidence 99999999999875
No 442
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=44.17 E-value=55 Score=34.24 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=28.8
Q ss_pred hhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCC
Q psy8912 416 DAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTT 449 (538)
Q Consensus 416 d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~ 449 (538)
...|-|-.+.|++.+++++++++|..+.+.|+..
T Consensus 77 ~i~GGEPLL~pdl~eiv~~~~~~g~~v~l~TNG~ 110 (318)
T TIGR03470 77 SIPGGEPLLHPEIDEIVRGLVARKKFVYLCTNAL 110 (318)
T ss_pred EEeCccccccccHHHHHHHHHHcCCeEEEecCce
Confidence 3345567789999999999999999999999775
No 443
>KOG0203|consensus
Probab=43.47 E-value=36 Score=40.24 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=32.6
Q ss_pred ccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 55 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 55 ~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.|.+.+.+.+..+++.|+++..+|+-.. ..+.++.+..|+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhp-iTAkAiA~~vgI 629 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKSVGI 629 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCcc-chhhhhhhheee
Confidence 4557788999999999999999999844 677777777764
No 444
>PRK00208 thiG thiazole synthase; Reviewed
Probab=43.45 E-value=1.7e+02 Score=29.85 Aligned_cols=99 Identities=9% Similarity=0.002 Sum_probs=65.5
Q ss_pred cCCCccCCCHHHHHHHhhhC---CceEE-EEcCCCcHHHHHHHHHHcCCCCCCc---cee-ecCCCCHHHHHHHHHHcCC
Q psy8912 51 GTLIKYYRGVPEILRYLKEN---KCLVA-AASRTSEILHAKQILNLINLNQYFS---NKE-IYPGQKTTHFESLKKATGI 122 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~---Gikia-IvTn~~~p~~~~~~L~~lgL~~~Fd---~ie-~~~~~Kp~~f~~ale~lgi 122 (538)
.+.-.++|+..++++..+.. |+.+. ++++... ..+.+..+|-.-... .|. ..+-..|+....+.+..++
T Consensus 100 ~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~---~ak~l~~~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~v 176 (250)
T PRK00208 100 GDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPV---LAKRLEEAGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADV 176 (250)
T ss_pred cCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCC
Confidence 44566789999999988877 99999 6666633 455566666432211 110 1111256777777666444
Q ss_pred CCCcEEEEeCC---cccHHHHhhcCCeEEEECCCCCc
Q psy8912 123 EYKDMVFFDDE---ERNSHDVSPLGVTCIHSWLMMSS 156 (538)
Q Consensus 123 ~P~e~L~IGDs---~~DI~aAk~aG~~tI~V~~G~~~ 156 (538)
.+++|=+ +.|+..|-++|+..+.|+++...
T Consensus 177 ----pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 177 ----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 4667655 56899999999999999987753
No 445
>KOG3128|consensus
Probab=43.16 E-value=41 Score=34.46 Aligned_cols=115 Identities=11% Similarity=0.025 Sum_probs=68.4
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhc-CCcc-------ccccceee--cCCchHH---H------
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLF-NWNQ-------HFDHKEIF--PGQKTTH---F------ 481 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~l-gL~~-------yFd~~~i~--~~~k~~~---~------ 481 (538)
.+.++.|..++.+.|+.+++++-|+|+.- -+.++.++++- ++.. |-++.+.+ .+.+... |
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGi-gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v 214 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGI-GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV 214 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecch-HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence 46788999999999999999999999885 45667776553 3321 21111111 1111111 1
Q ss_pred -HHHHHHh--CCCCCcEEEEecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHHHh
Q psy8912 482 -ANLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 482 -~kal~~l--gi~pee~l~~eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
+..-+.+ --....+++.||+..|+.-|--+--..--...|+-.+..++.+++|-.
T Consensus 215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd 272 (298)
T KOG3128|consen 215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMD 272 (298)
T ss_pred HHhhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHh
Confidence 1111111 235678999999999988776522222223346666666677776643
No 446
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=42.66 E-value=53 Score=34.14 Aligned_cols=44 Identities=14% Similarity=0.084 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCcccHHHHhhcCCeEEEECCCCCchH
Q psy8912 111 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHSWLMMSSGR 158 (538)
Q Consensus 111 ~~f~~ale~lgi~P~e~L~IGDs~~DI~aAk~aG~~tI~V~~G~~~~~ 158 (538)
.-+.+++++.|. | .+.| |+..||+...-.|..+|+++.|.+..+
T Consensus 228 ~rL~eiA~~~g~-~--aylI-d~~~ei~~~w~~~~~~VGvTAGAStPd 271 (294)
T COG0761 228 NRLAEIAKRHGK-P--AYLI-DDAEEIDPEWLKGVKTVGVTAGASTPD 271 (294)
T ss_pred HHHHHHHHHhCC-C--eEEe-CChHhCCHHHhcCccEEEEecCCCCCH
Confidence 445555666665 2 2222 445555555555666666666655443
No 447
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=42.61 E-value=85 Score=33.70 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=30.2
Q ss_pred cCCCCccCCCHHHHHHHHHHC-Cce-EEEEeCCCch-HHHHHHHhhcCCc
Q psy8912 418 GGAIIKYYRDVPAILKYLKQN-NCL-VAAASRTTEM-LRAHQLVDLFNWN 464 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~-Gik-laIASss~~~-~~a~~~L~~lgL~ 464 (538)
.|-|-.+.|++.++++.+++. |+. +++.|+.... +.+. -|...|+.
T Consensus 113 tGGEPllr~dl~eli~~l~~~~gi~~i~itTNG~lL~~~~~-~L~~aGld 161 (373)
T PLN02951 113 TGGEPTLRKDIEDICLQLSSLKGLKTLAMTTNGITLSRKLP-RLKEAGLT 161 (373)
T ss_pred ECCCCcchhhHHHHHHHHHhcCCCceEEEeeCcchHHHHHH-HHHhCCCC
Confidence 344666789999999999986 885 8887755321 2222 34445654
No 448
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=42.48 E-value=32 Score=32.25 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=47.3
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCC-cHHHHHHHHHHcCCCCCCcce----eecCCCCHHHHHHHHHHcCCCCC
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTS-EILHAKQILNLINLNQYFSNK----EIYPGQKTTHFESLKKATGIEYK 125 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~-~p~~~~~~L~~lgL~~~Fd~i----e~~~~~Kp~~f~~ale~lgi~P~ 125 (538)
-....+.|++.+++++|-+. +.++|+|... .|..++...+.+- ++|.++ .++++.| |+-..
T Consensus 64 FRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~--E~FPFi~~qn~vfCgnK-----------nivka 129 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLK--EKFPFISYQNIVFCGNK-----------NIVKA 129 (180)
T ss_pred hhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHH--HHCCCCChhhEEEecCC-----------CeEEe
Confidence 44567889999999999988 8999999763 2344555444442 556654 2333332 11111
Q ss_pred cEEEEeCCcccHHHHh
Q psy8912 126 DMVFFDDEERNSHDVS 141 (538)
Q Consensus 126 e~L~IGDs~~DI~aAk 141 (538)
-++|+|++.+++.-+
T Consensus 130 -DilIDDnp~nLE~F~ 144 (180)
T COG4502 130 -DILIDDNPLNLENFK 144 (180)
T ss_pred -eEEecCCchhhhhcc
Confidence 346888887766544
No 449
>PLN03190 aminophospholipid translocase; Provisional
Probab=42.01 E-value=87 Score=38.91 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=28.5
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
++.+||.++++.|++.|+++-++|.-+ ++.|..+-
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~-~~tAi~IA 760 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDK-QETAISIG 760 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHH
Confidence 689999999999999999999999754 33544443
No 450
>KOG1424|consensus
Probab=41.37 E-value=19 Score=40.26 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=56.2
Q ss_pred hhhhhhhhcccCcCCCccceEEeecC------------------CCCcCCC----CCCcccccccccchHhhhcCCC---
Q psy8912 367 KKIKHFANLKKDSKIKYKDMVFFDDE------------------ERNARSI----SKLGVIGIQVHRDKVLDAGGAI--- 421 (538)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~Dld------------------h~~~s~~----~p~~~i~i~~~~~~i~d~~~~~--- 421 (538)
-||+|||-|+=++++ +..|.- -+.|.++ +|-++++-++..+.+.+.|+..
T Consensus 347 GkTKHFQTi~ls~~v-----~LCDCPGLVfPSf~~~r~emvl~GiLPIDQmrd~~~~~~llaerIP~~~Le~~Y~~k~~e 421 (562)
T KOG1424|consen 347 GKTKHFQTIFLSPSV-----CLCDCPGLVFPSFSPTRAEMVLNGILPIDQLRDHYGAVGLLAERIPRHVLERLYGHKPRE 421 (562)
T ss_pred CCcceeEEEEcCCCc-----eecCCCCccccCCCchHHHHHHhcCccHHHhhcccchHHHHHHhcCHHHHHHHhCCCccc
Confidence 399999999877543 333322 4677777 3677777788888899988621
Q ss_pred ---CccCCCHHHHHHHH-HHCCceEEEEeCCCchHHHHHHHhh
Q psy8912 422 ---IKYYRDVPAILKYL-KQNNCLVAAASRTTEMLRAHQLVDL 460 (538)
Q Consensus 422 ---v~l~pGv~e~L~~L-k~~GiklaIASss~~~~~a~~~L~~ 460 (538)
-.--|-+.++|... ..+|+..+=+=. +...-|+.+|+.
T Consensus 422 ~~~~~~pp~A~ell~a~a~~RGfmts~~~~-D~~RAAr~ILKD 463 (562)
T KOG1424|consen 422 DPEDSRPPSAAELLNAYAYKRGFMTSKGLP-DEYRAARYILKD 463 (562)
T ss_pred ccCCCCCchHHHHHHHHHHhcchhhhccCC-cchHHHHHHHHH
Confidence 11124677877644 578885444433 444466777764
No 451
>PRK08005 epimerase; Validated
Probab=41.14 E-value=1.6e+02 Score=29.16 Aligned_cols=107 Identities=10% Similarity=0.028 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC---C--chHHHHHHHHHhCCCCCcEEEEe
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG---Q--KTTHFANLKKATGIEYKDMVFFD 499 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~---~--k~~~~~kal~~lgi~pee~l~~e 499 (538)
+...++|+++|+.|++.|+|=+-.++ +..+.+|. .-++.-.....++ . -+..+.|+.+--...++.-|-+|
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~---~vD~VlvMsV~PGf~GQ~f~~~~~~KI~~l~~~~~~~~I~VD 169 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPATPLLPYRYLAL---QLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFPAAECWAD 169 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHH---hcCEEEEEEecCCCccceecHHHHHHHHHHHHhcccCCEEEE
Confidence 45788999999999999999876555 12333443 2233222223333 1 13334444332222222226777
Q ss_pred ccccc--HHhHcccCCEEEEECCC-CCHHHHHHHHHHHH
Q psy8912 500 DEERN--SHDVSPLGVTCIHVKDG-MSHSVLHKGLKQWA 535 (538)
Q Consensus 500 Ds~~~--I~aAk~aGi~~i~V~dg-~t~~~~~~~l~~~~ 535 (538)
=..+. +..+.++|+..+-+..+ +..++..+.++.|.
T Consensus 170 GGI~~~~i~~l~~aGad~~V~GsaiF~~~d~~~~~~~~~ 208 (210)
T PRK08005 170 GGITLRAARLLAAAGAQHLVIGRALFTTANYDVTLSQFT 208 (210)
T ss_pred CCCCHHHHHHHHHCCCCEEEEChHhhCCCCHHHHHHHHh
Confidence 66553 55556799998766543 23345666666654
No 452
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=41.08 E-value=90 Score=32.67 Aligned_cols=46 Identities=9% Similarity=-0.000 Sum_probs=30.7
Q ss_pred CCCCccCCCHHHHHHHHHHCCc--eEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 419 GAIIKYYRDVPAILKYLKQNNC--LVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~~Gi--klaIASss~~~~~a~~~L~~lgL~ 464 (538)
|-|-.+.|++.++++++++.+. .+++.|+...-......|+..|+.
T Consensus 69 GGEPllr~dl~~li~~i~~~~~l~~i~itTNG~ll~~~~~~L~~aGl~ 116 (329)
T PRK13361 69 GGEPLVRRGCDQLVARLGKLPGLEELSLTTNGSRLARFAAELADAGLK 116 (329)
T ss_pred CcCCCccccHHHHHHHHHhCCCCceEEEEeChhHHHHHHHHHHHcCCC
Confidence 4466688999999999998764 688888653211112345556664
No 453
>PLN02580 trehalose-phosphatase
Probab=41.06 E-value=30 Score=37.51 Aligned_cols=123 Identities=12% Similarity=0.058 Sum_probs=65.0
Q ss_pred ccchHHHHHHhhhcCcceeeecccccc-chhhhHHhh---hCC-CcccccccccCcchhhhhhhhcccCcCCCccceEEe
Q psy8912 315 YRDIPEIVKYLKDHNIKLALASRTVHI-RNAYSLLHL---LGL-SDFFDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFF 389 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 389 (538)
-+.-+++++..+..|--.+.-+-||+- +...++-.- .+. ..|-.-.+.+|+- .++|..|..-.+- ...+++|
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~a--l~~~~~~~~~~~~-k~~~LfL 124 (384)
T PLN02580 48 PRKKTGKLDDVRSNGWLDAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSA--LTSFEQIANFAKG-KKIALFL 124 (384)
T ss_pred cccCCCccccccccchhhhhhccCCCccccccccccccccccchHHHHHHHHhCcHH--HHHHHHHHHHhhc-CCeEEEE
Confidence 344445555555556555555555554 222122110 000 1122234667772 2455444433222 3478888
Q ss_pred ecC-CCCcCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhh
Q psy8912 390 DDE-ERNARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDL 460 (538)
Q Consensus 390 Dld-h~~~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~ 460 (538)
|.| -+= |+. . ....+.+-|++++.|+.|.++ .+++|.|.-+.. .+...+..
T Consensus 125 DyDGTLa-----PIv-----~--------~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~-~L~~~l~~ 176 (384)
T PLN02580 125 DYDGTLS-----PIV-----D--------DPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRD-KVYELVGL 176 (384)
T ss_pred ecCCccC-----CCC-----C--------CcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHH-HHHHHhCC
Confidence 998 110 111 0 111244568999999999988 589999988755 55666654
No 454
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=40.09 E-value=2e+02 Score=30.50 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=60.7
Q ss_pred CHHHHHHHhhhC-CceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccH
Q psy8912 59 GVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNS 137 (538)
Q Consensus 59 gv~elL~~Lk~~-GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI 137 (538)
.+.++|+.|.+. ++++.+.-.+.. .....+.+.+. .+ +.+...+.-...-|..+++... ++||||. +|
T Consensus 201 ~i~~~l~~L~~~~~~~vi~~~hn~p-~~~~~i~~~l~--~~-~~v~~~~~l~~~~~l~ll~~a~------~vvgdSs-GI 269 (346)
T PF02350_consen 201 QILEALKALAERQNVPVIFPLHNNP-RGSDIIIEKLK--KY-DNVRLIEPLGYEEYLSLLKNAD------LVVGDSS-GI 269 (346)
T ss_dssp HHHHHHHHHHHHTTEEEEEE--S-H-HHHHHHHHHHT--T--TTEEEE----HHHHHHHHHHES------EEEESSH-HH
T ss_pred HHHHHHHHHHhcCCCcEEEEecCCc-hHHHHHHHHhc--cc-CCEEEECCCCHHHHHHHHhcce------EEEEcCc-cH
Confidence 566777787776 676655554423 44444444443 22 3433333334456777776543 4799999 98
Q ss_pred H-HHhhcCCeEEEECCCCCchHhHHhhCCCCCCEEEeCCchhhHHhhhh
Q psy8912 138 H-DVSPLGVTCIHSWLMMSSGRLKEATGIDYKDMIYFDDEQEHVNDISK 185 (538)
Q Consensus 138 ~-aAk~aG~~tI~V~~G~~~~~~~~~l~~~~~d~Ii~d~~~~~~~~i~~ 185 (538)
+ .|-..|.+|+-+.....+.+... .....++..+...+...+.+
T Consensus 270 ~eEa~~lg~P~v~iR~~geRqe~r~----~~~nvlv~~~~~~I~~ai~~ 314 (346)
T PF02350_consen 270 QEEAPSLGKPVVNIRDSGERQEGRE----RGSNVLVGTDPEAIIQAIEK 314 (346)
T ss_dssp HHHGGGGT--EEECSSS-S-HHHHH----TTSEEEETSSHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCCCCCHHHHh----hcceEEeCCCHHHHHHHHHH
Confidence 8 99999999998855443333322 22344455566666665554
No 455
>KOG0209|consensus
Probab=39.03 E-value=58 Score=38.62 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=32.8
Q ss_pred CCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCC
Q psy8912 53 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL 95 (538)
Q Consensus 53 ~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL 95 (538)
.+.+-|++++.+++|.+.++++..+|+-+- -.+-.+.+.+|+
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnp-LTAchVak~v~i 714 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNP-LTACHVAKEVGI 714 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCc-cchheehheeee
Confidence 456779999999999999999999998744 555555555554
No 456
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=38.18 E-value=59 Score=33.81 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=85.6
Q ss_pred hhcccCcCCCccceEEeecCCCCcCCC----CCCcccccccccchHhhh---------c-CCCCccCCCHHHHHHHHHHC
Q psy8912 373 ANLKKDSKIKYKDMVFFDDEERNARSI----SKLGVIGIQVHRDKVLDA---------G-GAIIKYYRDVPAILKYLKQN 438 (538)
Q Consensus 373 ~~~~~~~~~~~~~l~~~Dldh~~~s~~----~p~~~i~i~~~~~~i~d~---------~-~~~v~l~pGv~e~L~~Lk~~ 438 (538)
+..+|-++--|.-+++=|-.|+-.-.+ |+-+......... +... + .+.....++..++...|+++
T Consensus 105 ~~v~~~~~~G~~iIliG~~gHpEv~Gt~Gq~~~~~~~lve~~~d-~~~l~~~~~~~l~~~tQTTls~ddt~~Iv~~l~~r 183 (294)
T COG0761 105 KEVERYAREGYEIILIGHKGHPEVIGTMGQYPEGGVLLVESVED-VANLKVQLPDKLAFVTQTTLSVDDTAEIVAALKER 183 (294)
T ss_pred HHHHHHHhCCCEEEEEccCCCCceeeeccccCCCceEEEecHHH-HHhcccCCcccEEEEeeeecCHHHHHHHHHHHHHh
Confidence 455556666777777777777654322 2222111111111 0000 0 01122356788999999987
Q ss_pred Cce---------EEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHHHHHHHHHhCCCCCcEEEEecccccHHh
Q psy8912 439 NCL---------VAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHD 507 (538)
Q Consensus 439 Gik---------laIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~~~kal~~lgi~pee~l~~eDs~~~I~a 507 (538)
++ ++-||.+. .+-++.+.... +.+- .+++. +...++..+.++.|. .+..||+ ..+|+.
T Consensus 184 -~p~~~~~~~~~ICyAT~nR-Q~Avk~la~~~---Dl~i--VVG~~nSSNs~rL~eiA~~~g~---~aylId~-~~ei~~ 252 (294)
T COG0761 184 -FPKIEVPPFNDICYATQNR-QDAVKELAPEV---DLVI--VVGSKNSSNSNRLAEIAKRHGK---PAYLIDD-AEEIDP 252 (294)
T ss_pred -CccccCCcccccchhhhhH-HHHHHHHhhcC---CEEE--EECCCCCccHHHHHHHHHHhCC---CeEEeCC-hHhCCH
Confidence 55 88888764 43444444432 2222 33333 457778888899988 4666665 567899
Q ss_pred HcccCCEEEEECCCCCHHHH
Q psy8912 508 VSPLGVTCIHVKDGMSHSVL 527 (538)
Q Consensus 508 Ak~aGi~~i~V~dg~t~~~~ 527 (538)
.+=.|..+|+|+-|.+..+|
T Consensus 253 ~w~~~~~~VGvTAGAStPd~ 272 (294)
T COG0761 253 EWLKGVKTVGVTAGASTPDW 272 (294)
T ss_pred HHhcCccEEEEecCCCCCHH
Confidence 99999999999999887765
No 457
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=37.97 E-value=1.4e+02 Score=28.70 Aligned_cols=94 Identities=11% Similarity=0.128 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccc
Q psy8912 426 RDVPAILKYLKQN--NCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEER 503 (538)
Q Consensus 426 pGv~e~L~~Lk~~--GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~ 503 (538)
.-+..+++.|+++ |+++-+.|.|... .+.+.+.+. +.-. ....+-+-+....+.++.. .|+-+|++|-..+
T Consensus 35 ~a~~~Li~~l~~~~p~~~illT~~T~tg--~~~~~~~~~--~~v~-~~~~P~D~~~~~~rfl~~~--~P~~~i~~EtElW 107 (186)
T PF04413_consen 35 NAARPLIKRLRKQRPDLRILLTTTTPTG--REMARKLLP--DRVD-VQYLPLDFPWAVRRFLDHW--RPDLLIWVETELW 107 (186)
T ss_dssp HHHHHHHHHHTT---TS-EEEEES-CCH--HHHHHGG-G--GG-S-EEE---SSHHHHHHHHHHH----SEEEEES----
T ss_pred HHHHHHHHHHHHhCCCCeEEEEecCCch--HHHHHHhCC--CCeE-EEEeCccCHHHHHHHHHHh--CCCEEEEEccccC
Confidence 3577889999987 8999998887654 222333221 1111 1223345566667777655 7899999999854
Q ss_pred --cHHhHcccCCEEEEECCCCCHHH
Q psy8912 504 --NSHDVSPLGVTCIHVKDGMSHSV 526 (538)
Q Consensus 504 --~I~aAk~aGi~~i~V~dg~t~~~ 526 (538)
=+..|++.|+.++.|..-++...
T Consensus 108 Pnll~~a~~~~ip~~LvNarls~~s 132 (186)
T PF04413_consen 108 PNLLREAKRRGIPVVLVNARLSERS 132 (186)
T ss_dssp HHHHHH-----S-EEEEEE------
T ss_pred HHHHHHHhhcCCCEEEEeeeecccc
Confidence 48999999999999977665544
No 458
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=37.55 E-value=96 Score=25.34 Aligned_cols=58 Identities=14% Similarity=0.226 Sum_probs=0.0
Q ss_pred CceEEEeCCCCC-ChhhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 16 PKMVVFDLDYTL-WPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 16 iKaVIFDlDGTL-w~~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
++.|+||+.++= ++...... ..++.+.++++|..+.++.-++. +...++..|
T Consensus 38 ~~~viid~~~v~~iDs~g~~~------------------------L~~l~~~~~~~g~~v~i~~~~~~---~~~~l~~~g 90 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSGLGV------------------------LLGAYKRARAAGGRLVLVNVSPA---VRRVLELTG 90 (99)
T ss_pred CCEEEEECCCCCEEcchhHHH------------------------HHHHHHHHHHcCCeEEEEcCCHH---HHHHHHHhC
Q ss_pred CCCCCc
Q psy8912 95 LNQYFS 100 (538)
Q Consensus 95 L~~~Fd 100 (538)
+.++|.
T Consensus 91 l~~~~~ 96 (99)
T cd07043 91 LDRLFP 96 (99)
T ss_pred cceeee
No 459
>KOG2832|consensus
Probab=37.34 E-value=76 Score=34.14 Aligned_cols=102 Identities=18% Similarity=0.185 Sum_probs=67.7
Q ss_pred CceEEEeCCCCCCh-hhHhhhhchhHHHHHHHHhhhcCCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcC
Q psy8912 16 PKMVVFDLDYTLWP-LHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN 94 (538)
Q Consensus 16 iKaVIFDlDGTLw~-~~~~~~i~~~~~~~~~i~~~~~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lg 94 (538)
+-++|+||.++|.. .|-.. ..-...--||+.-+|..|. +.+.++++|+... -.+..+++.++
T Consensus 189 ~yTLVleledvLVhpdws~~---------------tGwRf~kRPgvD~FL~~~a-~~yEIVi~sse~g-mt~~pl~d~lD 251 (393)
T KOG2832|consen 189 PYTLVLELEDVLVHPDWSYK---------------TGWRFKKRPGVDYFLGHLA-KYYEIVVYSSEQG-MTVFPLLDALD 251 (393)
T ss_pred CceEEEEeeeeEeccchhhh---------------cCceeccCchHHHHHHhhc-ccceEEEEecCCc-cchhhhHhhcC
Confidence 45799999999932 11110 0123456799999999998 5699999999877 77777888886
Q ss_pred CCCCCcceeecCCCC---HHHHHHHHHHcCCCCCcEEEEeCCcc
Q psy8912 95 LNQYFSNKEIYPGQK---TTHFESLKKATGIEYKDMVFFDDEER 135 (538)
Q Consensus 95 L~~~Fd~ie~~~~~K---p~~f~~ale~lgi~P~e~L~IGDs~~ 135 (538)
=..+..+--..+..+ +..+.. +..++-++..+++|+=..+
T Consensus 252 P~g~IsYkLfr~~t~y~~G~HvKd-ls~LNRdl~kVivVd~d~~ 294 (393)
T KOG2832|consen 252 PKGYISYKLFRGATKYEEGHHVKD-LSKLNRDLQKVIVVDFDAN 294 (393)
T ss_pred CcceEEEEEecCcccccCccchhh-hhhhccccceeEEEEcccc
Confidence 444444321122222 233333 5678899999999985543
No 460
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=36.63 E-value=1.6e+02 Score=36.10 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcE-EEEeCCcc-cHHHHhhcCCeEEEECCC
Q psy8912 107 GQKTTHFESLKKATGIEYKDM-VFFDDEER-NSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 107 ~~Kp~~f~~ale~lgi~P~e~-L~IGDs~~-DI~aAk~aG~~tI~V~~G 153 (538)
.+|...+++++.++|++.+++ +|+||+.+ |...- -.|.+.-.|..|
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi~~g 1002 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVILKG 1002 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEEEec
Confidence 468899999999999999999 55999998 96655 345653334333
No 461
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=36.52 E-value=1.7e+02 Score=29.61 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=0.0
Q ss_pred hHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCcchhhhhhhhcccCcCCCccceEEeecCCCCcC
Q psy8912 318 IPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDEERNAR 397 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s 397 (538)
+.+|-+.++++|..+.+.+-....+.- +.|+.| ++--.+.==+.+......|++.+.+. ++| +|++|-.-.+..
T Consensus 20 i~gIe~~a~~~Gy~l~l~~t~~~~~~e-~~i~~l-~~~~vDGiI~~s~~~~~~~l~~~~~~-~iP---vV~~~~~~~~~~ 93 (279)
T PF00532_consen 20 IRGIEQEAREHGYQLLLCNTGDDEEKE-EYIELL-LQRRVDGIILASSENDDEELRRLIKS-GIP---VVLIDRYIDNPE 93 (279)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTTHHHH-HHHHHH-HHTTSSEEEEESSSCTCHHHHHHHHT-TSE---EEEESS-SCTTC
T ss_pred HHHHHHHHHHcCCEEEEecCCCchHHH-HHHHHH-HhcCCCEEEEecccCChHHHHHHHHc-CCC---EEEEEeccCCcc
Q ss_pred CCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCc-e-EEEEeCCCchHHHH-------HHHhhcCCccccc
Q psy8912 398 SISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNC-L-VAAASRTTEMLRAH-------QLVDLFNWNQHFD 468 (538)
Q Consensus 398 ~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gi-k-laIASss~~~~~a~-------~~L~~lgL~~yFd 468 (538)
.+|--. .|.+. +..+..++|.++|+ + +++.+......... .+|+..|+.---.
T Consensus 94 ~~~~V~-----------~D~~~-------a~~~a~~~Li~~Gh~~~I~~i~~~~~~~~~~~R~~Gy~~Al~~~Gl~~~~~ 155 (279)
T PF00532_consen 94 GVPSVY-----------IDNYE-------AGYEATEYLIKKGHRRPIAFIGGPEDSSTSRERLQGYRDALKEAGLPIDEE 155 (279)
T ss_dssp TSCEEE-----------EEHHH-------HHHHHHHHHHHTTCCSTEEEEEESTTTHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred cCCEEE-----------EcchH-------HHHHHHHHHHhcccCCeEEEEecCcchHHHHHHHHHHHHHHHHcCCCCCcc
Q ss_pred cceeecCCchHHHHHHHHHhCCCCC-cEEEEecccccHHhHccc
Q psy8912 469 HKEIFPGQKTTHFANLKKATGIEYK-DMVFFDDEERNSHDVSPL 511 (538)
Q Consensus 469 ~~~i~~~~k~~~~~kal~~lgi~pe-e~l~~eDs~~~I~aAk~a 511 (538)
.+..+......-+..+.+-+.-.|+ +.|+.-+....+.+.+.+
T Consensus 156 ~i~~~~~~~~~g~~~~~~ll~~~p~idai~~~nd~~A~ga~~~l 199 (279)
T PF00532_consen 156 WIFEGDFDYESGYEAARELLESHPDIDAIFCANDMMAIGAIRAL 199 (279)
T ss_dssp EEEESSSSHHHHHHHHHHHHHTSTT-SEEEESSHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHhhCCCCEEEEEeCHHHHHHHHHHH
No 462
>KOG0323|consensus
Probab=36.49 E-value=46 Score=38.34 Aligned_cols=81 Identities=20% Similarity=0.150 Sum_probs=56.4
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCC-CCCcceeecCCCCHHHHHHHHHHcCCCCCc---E
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYPGQKTTHFESLKKATGIEYKD---M 127 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~-~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e---~ 127 (538)
..+++.|++.+||+.+.+. +.+.|+|-+.+ .++..+++.+.=. .||....+... ...+.+...-....|.. +
T Consensus 198 ~~vKlRP~~~efL~~~skl-femhVyTmg~R-~YA~~i~~liDP~~~lF~dRIisrd--e~~~~kt~dL~~~~p~g~smv 273 (635)
T KOG0323|consen 198 YLVKLRPFVHEFLKEANKL-FEMHVYTMGTR-DYALEIAKLIDPEGKYFGDRIISRD--ESPFFKTLDLVLLFPCGDSMV 273 (635)
T ss_pred EEEEeCccHHHHHHHHHhh-ceeEEEeccch-HHHHHHHHHhCCCCccccceEEEec--CCCcccccccccCCCCCCccE
Confidence 4567889999999999988 99999999999 9999999888643 57775422211 12233333333445544 8
Q ss_pred EEEeCCccc
Q psy8912 128 VFFDDEERN 136 (538)
Q Consensus 128 L~IGDs~~D 136 (538)
+.|+|+..-
T Consensus 274 vIIDDr~dV 282 (635)
T KOG0323|consen 274 VIIDDRSDV 282 (635)
T ss_pred EEEeCcccc
Confidence 888888543
No 463
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=36.21 E-value=2.1e+02 Score=28.51 Aligned_cols=106 Identities=12% Similarity=0.092 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC---C--------chHHHHHHHHHhCCCCC
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG---Q--------KTTHFANLKKATGIEYK 493 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~---~--------k~~~~~kal~~lgi~pe 493 (538)
+...++|+++|+.|++.|+|=+-.++ +.++.+|.. -++.-...+.++ . |...+.+..++.+. +
T Consensus 97 ~~~~~~l~~Ir~~g~k~GlalnP~T~~~~i~~~l~~---vD~VlvMtV~PGf~GQ~fi~~~l~KI~~l~~~~~~~~~--~ 171 (223)
T PRK08745 97 RHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVLPE---LDLVLVMSVNPGFGGQAFIPSALDKLRAIRKKIDALGK--P 171 (223)
T ss_pred ccHHHHHHHHHHCCCceeEEeCCCCCHHHHHHHHhh---cCEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCC--C
Confidence 45789999999999999999876655 123444432 232222222232 1 12222222222222 3
Q ss_pred cEEEEeccccc--HHhHcccCCEEEEECCCC-CHHHHHHHHHHHHh
Q psy8912 494 DMVFFDDEERN--SHDVSPLGVTCIHVKDGM-SHSVLHKGLKQWAS 536 (538)
Q Consensus 494 e~l~~eDs~~~--I~aAk~aGi~~i~V~dg~-t~~~~~~~l~~~~~ 536 (538)
--|-||=..+. +....++|+.++-+..+. ..++..+.++.+++
T Consensus 172 ~~IeVDGGI~~eti~~l~~aGaDi~V~GSaiF~~~d~~~~~~~lr~ 217 (223)
T PRK08745 172 IRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRA 217 (223)
T ss_pred eeEEEECCCCHHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 33556654442 445566999988776653 23456666666654
No 464
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=36.07 E-value=32 Score=32.64 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=53.1
Q ss_pred cCCCHHHHHHHHH---HCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 424 YYRDVPAILKYLK---QNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 424 l~pGv~e~L~~Lk---~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
+.+...++|+.|+ ..|-++|+++..+.......+-+.+|+.= ..+.-...+.+..+++++.-.. --+++|+
T Consensus 59 I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-----~~~~~~~~~e~~~~i~~~~~~G-~~viVGg 132 (176)
T PF06506_consen 59 IPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-----KIYPYDSEEEIEAAIKQAKAEG-VDVIVGG 132 (176)
T ss_dssp E---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-----EEEEESSHHHHHHHHHHHHHTT---EEEES
T ss_pred ECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-----EEEEECCHHHHHHHHHHHHHcC-CcEEECC
Confidence 4455556555554 56779999987765433455555566521 1122223333444444432222 2467888
Q ss_pred ccccHHhHcccCCEEEEECCCCCHHHHHHHH
Q psy8912 501 EERNSHDVSPLGVTCIHVKDGMSHSVLHKGL 531 (538)
Q Consensus 501 s~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l 531 (538)
... ...|++.|+.++.+..| .+....++
T Consensus 133 ~~~-~~~A~~~gl~~v~i~sg--~esi~~Al 160 (176)
T PF06506_consen 133 GVV-CRLARKLGLPGVLIESG--EESIRRAL 160 (176)
T ss_dssp HHH-HHHHHHTTSEEEESS----HHHHHHHH
T ss_pred HHH-HHHHHHcCCcEEEEEec--HHHHHHHH
Confidence 865 79999999999988664 44444443
No 465
>PF04227 Indigoidine_A: Indigoidine synthase A like protein; InterPro: IPR007342 Members of this entry catalyze the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. It is also reported to be involved in the synthesis of indigoidine, which is a blue pigment synthesised by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds; PDB: 1VKM_C.
Probab=36.00 E-value=28 Score=36.31 Aligned_cols=44 Identities=25% Similarity=0.408 Sum_probs=30.6
Q ss_pred chhhcccceeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccce
Q psy8912 213 RSISKLGVIGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTT 266 (538)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (538)
-|+-++|...+.+..+ -.|---|.|+|||||..+++.|.+..+.
T Consensus 134 aDL~eL~rtpv~VV~a----------G~KsILDi~~TLE~LET~GV~Vvgy~t~ 177 (293)
T PF04227_consen 134 ADLTELARTPVAVVCA----------GAKSILDIPKTLEYLETQGVPVVGYGTD 177 (293)
T ss_dssp HHHHHHTTS-EEEEES----------BB-TTS-HHHHHHHHHHTT--EEEES-S
T ss_pred hHHHHHhcCCceEEEc----------cCcchhchHHHHHHhhcCCeEEEEecCC
Confidence 4677788878776654 4688889999999999999999998543
No 466
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=35.90 E-value=2.7e+02 Score=29.21 Aligned_cols=92 Identities=7% Similarity=-0.007 Sum_probs=59.6
Q ss_pred HHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEecccccHHhHcccCCEE
Q psy8912 436 KQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC 515 (538)
Q Consensus 436 k~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eDs~~~I~aAk~aGi~~ 515 (538)
++.|..+.|.||-.++..+...|+..- +-.....+.+......|...+. . .+.+++-+||.+-+-.|-..|..+
T Consensus 179 ~~~~~~~~vttSRRTp~~~~~~L~~~~--~~~~~~~~~~~~~~nPy~~~La---~-ad~i~VT~DSvSMvsEA~~tG~pV 252 (311)
T PF06258_consen 179 AAYGGSLLVTTSRRTPPEAEAALRELL--KDNPGVYIWDGTGENPYLGFLA---A-ADAIVVTEDSVSMVSEAAATGKPV 252 (311)
T ss_pred HhCCCeEEEEcCCCCcHHHHHHHHHhh--cCCCceEEecCCCCCcHHHHHH---h-CCEEEEcCccHHHHHHHHHcCCCE
Confidence 457778999999888877777776532 1112222333333444554443 2 467888999999999999999888
Q ss_pred EEECCCCCHHHHHHHHHH
Q psy8912 516 IHVKDGMSHSVLHKGLKQ 533 (538)
Q Consensus 516 i~V~dg~t~~~~~~~l~~ 533 (538)
..++-.-...-+.+.+..
T Consensus 253 ~v~~l~~~~~r~~r~~~~ 270 (311)
T PF06258_consen 253 YVLPLPGRSGRFRRFHQS 270 (311)
T ss_pred EEecCCCcchHHHHHHHH
Confidence 777665444444444443
No 467
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=35.28 E-value=89 Score=30.25 Aligned_cols=92 Identities=22% Similarity=0.299 Sum_probs=56.9
Q ss_pred CccCCCHHHHHHHHHHCCceEEEEeCCCchHHH---HHHHhhcCCccccccceeecC-CchHHHHHHHHHhCCCCCcEEE
Q psy8912 422 IKYYRDVPAILKYLKQNNCLVAAASRTTEMLRA---HQLVDLFNWNQHFDHKEIFPG-QKTTHFANLKKATGIEYKDMVF 497 (538)
Q Consensus 422 v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a---~~~L~~lgL~~yFd~~~i~~~-~k~~~~~kal~~lgi~pee~l~ 497 (538)
..+-.+|...|..++++.--+++.+.. .+.. ...|..-+ -.||..++... +|+ .+++.+.++ +|
T Consensus 71 ~l~~q~v~~~L~~~~e~~~L~~itar~--~dl~~iT~~~l~~q~--ih~~~l~i~g~h~KV----~~vrth~id----lf 138 (194)
T COG5663 71 ALLAQLVKQVLPSLKEEHRLIYITARK--ADLTRITYAWLFIQN--IHYDHLEIVGLHHKV----EAVRTHNID----LF 138 (194)
T ss_pred HHHHHHHHHHhHHHHhhceeeeeehhh--HHHHHHHHHHHHHhc--cchhhhhhhcccccc----hhhHhhccC----cc
Confidence 456678999999999985544444433 2332 23343333 24554445433 453 355666663 79
Q ss_pred Eeccccc-HHhHcccCCEEEEECCCCCHH
Q psy8912 498 FDDEERN-SHDVSPLGVTCIHVKDGMSHS 525 (538)
Q Consensus 498 ~eDs~~~-I~aAk~aGi~~i~V~dg~t~~ 525 (538)
|||+.-+ .+.|+++|+.++.+.-..+..
T Consensus 139 ~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 139 FEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred ccccCchHHHHHHhcCCcEEEecCccccc
Confidence 9999765 667777999999997654443
No 468
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=34.61 E-value=1.2e+02 Score=31.12 Aligned_cols=47 Identities=11% Similarity=0.093 Sum_probs=31.6
Q ss_pred cCCCCccCCCHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNC-LVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~Gi-klaIASss~~~~~a~~~L~~lgL~ 464 (538)
.|-|-.+.|++.++++++++.|+ .+++.|+..........|...|+.
T Consensus 63 tGGEPll~~~l~~iv~~l~~~g~~~v~i~TNG~ll~~~~~~l~~~g~~ 110 (302)
T TIGR02668 63 TGGEPLLRKDLIEIIRRIKDYGIKDVSMTTNGILLEKLAKKLKEAGLD 110 (302)
T ss_pred ECcccccccCHHHHHHHHHhCCCceEEEEcCchHHHHHHHHHHHCCCC
Confidence 34466678999999999999999 899888653221111234555653
No 469
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=34.41 E-value=2.2e+02 Score=29.74 Aligned_cols=32 Identities=22% Similarity=0.102 Sum_probs=27.6
Q ss_pred cCCCccCCCHHHHHHHhhhCCceEEEEcCCCc
Q psy8912 51 GTLIKYYRGVPEILRYLKENKCLVAAASRTSE 82 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~ 82 (538)
..+.-+.|++.++++.++++|..+.+.||+..
T Consensus 80 GGEPLL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 80 GGEPLLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred CccccccccHHHHHHHHHHcCCeEEEecCcee
Confidence 34555679999999999999999999999965
No 470
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional
Probab=33.97 E-value=2.1e+02 Score=28.46 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=57.2
Q ss_pred HHHHHHHHHHCCceEEEEeCCCch-HHHHHHHhhcCCccccccceeecC---C--chHHHHHHHHHhCCCCCcEEEEecc
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEM-LRAHQLVDLFNWNQHFDHKEIFPG---Q--KTTHFANLKKATGIEYKDMVFFDDE 501 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~-~~a~~~L~~lgL~~yFd~~~i~~~---~--k~~~~~kal~~lgi~pee~l~~eDs 501 (538)
+.++++.+++.|.++||+-+...+ +..+.+++ ....++.-.....++ . .+..+.++.+--...++-.|.|+=.
T Consensus 103 ~~~~l~~ik~~G~~~gval~p~t~~e~l~~~l~-~~~vD~Vl~m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~I~VdGG 181 (228)
T PTZ00170 103 PKAVARKIREAGMKVGVAIKPKTPVEVLFPLID-TDLVDMVLVMTVEPGFGGQSFMHDMMPKVRELRKRYPHLNIQVDGG 181 (228)
T ss_pred HHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHc-cchhhhHHhhhcccCCCCcEecHHHHHHHHHHHHhcccCeEEECCC
Confidence 678999999999999998665443 12233331 132333221112222 1 1222222222111222333444433
Q ss_pred c--ccHHhHcccCCEEEEECCCCC-HHHHHHHHHHHHh
Q psy8912 502 E--RNSHDVSPLGVTCIHVKDGMS-HSVLHKGLKQWAS 536 (538)
Q Consensus 502 ~--~~I~aAk~aGi~~i~V~dg~t-~~~~~~~l~~~~~ 536 (538)
. ..+..+.++|+..+.+..+.+ .+++++.++.+++
T Consensus 182 I~~~ti~~~~~aGad~iVvGsaI~~a~d~~~~~~~i~~ 219 (228)
T PTZ00170 182 INLETIDIAADAGANVIVAGSSIFKAKDRKQAIELLRE 219 (228)
T ss_pred CCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 2 346777889999988877654 3457777777764
No 471
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=33.93 E-value=3.4e+02 Score=26.71 Aligned_cols=98 Identities=8% Similarity=-0.067 Sum_probs=56.3
Q ss_pred HHHHHHHCCceE-EEEeCC-----------CchHHHHHHHhhcCCccccccceeec--CCchHHHHHHHHHhCCCCCcEE
Q psy8912 431 ILKYLKQNNCLV-AAASRT-----------TEMLRAHQLVDLFNWNQHFDHKEIFP--GQKTTHFANLKKATGIEYKDMV 496 (538)
Q Consensus 431 ~L~~Lk~~Gikl-aIASss-----------~~~~~a~~~L~~lgL~~yFd~~~i~~--~~k~~~~~kal~~lgi~pee~l 496 (538)
.|..++++|+.+ +++|-. ...+.++..-+.+|+..+.- .+.. ....+.+..++++..-.--+.|
T Consensus 13 al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i--~~~~~~~~~~~~l~~~l~~~~~~g~~~v 90 (218)
T TIGR03679 13 ALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKI--ETSGEKEKEVEDLKGALKELKREGVEGI 90 (218)
T ss_pred HHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEE--ECCCCChHHHHHHHHHHHHHHHcCCCEE
Confidence 456677889876 455521 12346777778888864322 1111 1222334444444322234578
Q ss_pred EEecccccH------HhHcccCCEEEEECCCCCHHHHHHH
Q psy8912 497 FFDDEERNS------HDVSPLGVTCIHVKDGMSHSVLHKG 530 (538)
Q Consensus 497 ~~eDs~~~I------~aAk~aGi~~i~V~dg~t~~~~~~~ 530 (538)
++||-.-+. ..+.++|+.+++=-|+.+..+.-+-
T Consensus 91 v~G~i~sd~~~~~~e~v~~~~gl~~~~PLw~~~~~el~~~ 130 (218)
T TIGR03679 91 VTGAIASRYQKSRIERICEELGLKVFAPLWGRDQEEYLRE 130 (218)
T ss_pred EECCcccHhHHHHHHHHHHhCCCeEEeehhcCCHHHHHHH
Confidence 888876553 3334589999888888887765443
No 472
>KOG0741|consensus
Probab=33.62 E-value=83 Score=35.73 Aligned_cols=130 Identities=14% Similarity=0.165 Sum_probs=83.0
Q ss_pred chhhhHHhhhCCCcccccccccC--------cchhhhhhhhcccCcCCCccceEEeecCCCCcCCCCCCcccccccccch
Q psy8912 342 RNAYSLLHLLGLSDFFDYKEIFP--------AEKKIKHFANLKKDSKIKYKDMVFFDDEERNARSISKLGVIGIQVHRDK 413 (538)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~Dldh~~~s~~~p~~~i~i~~~~~~ 413 (538)
-+-|++--++.++|+|-.--|-| -+.|..|-.++-+|..=.-=+++|+| |+-.+=.|--||=++++..
T Consensus 549 sGKTaLAA~iA~~S~FPFvKiiSpe~miG~sEsaKc~~i~k~F~DAYkS~lsiivvD----diErLiD~vpIGPRfSN~v 624 (744)
T KOG0741|consen 549 SGKTALAAKIALSSDFPFVKIISPEDMIGLSESAKCAHIKKIFEDAYKSPLSIIVVD----DIERLLDYVPIGPRFSNLV 624 (744)
T ss_pred CChHHHHHHHHhhcCCCeEEEeChHHccCccHHHHHHHHHHHHHHhhcCcceEEEEc----chhhhhcccccCchhhHHH
Confidence 45688889999999998766644 36799999988888544444667776 2322223443333444432
Q ss_pred HhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC-CchHHHHHHHHHhCC
Q psy8912 414 VLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG-QKTTHFANLKKATGI 490 (538)
Q Consensus 414 i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~-~k~~~~~kal~~lgi 490 (538)
+. + ..=+|+..--+|.+|-|...+++ +.+|+..|+.+.|+..--++. .+++...++++.+++
T Consensus 625 lQ-a----------L~VllK~~ppkg~kLli~~TTS~----~~vL~~m~i~~~F~~~i~Vpnl~~~~~~~~vl~~~n~ 687 (744)
T KOG0741|consen 625 LQ-A----------LLVLLKKQPPKGRKLLIFGTTSR----REVLQEMGILDCFSSTIHVPNLTTGEQLLEVLEELNI 687 (744)
T ss_pred HH-H----------HHHHhccCCCCCceEEEEecccH----HHHHHHcCHHHhhhheeecCccCchHHHHHHHHHccC
Confidence 21 1 11122222247888777665542 468999999999995433444 677888888888874
No 473
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=33.61 E-value=55 Score=34.44 Aligned_cols=60 Identities=5% Similarity=0.045 Sum_probs=39.3
Q ss_pred CCCccCCCHHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-eecCCCCHHHHHHHH
Q psy8912 52 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EIYPGQKTTHFESLK 117 (538)
Q Consensus 52 ~~~~l~pgv~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~~~~~Kp~~f~~al 117 (538)
....++|.+.++++.++++|+.++|.||+..++.++.+ ..++ +.+ ....+..++.|..+.
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~e~l~~L--~~~~----d~i~VSLda~~~e~~~~i~ 199 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRPDVLEKL--EEEP----TQLYVSLDAPDEETYKKIN 199 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCHHHHHHH--HhcC----CEEEEEccCCCHHHHHHHh
Confidence 44556889999999999999999999999773333322 1232 222 233445566666554
No 474
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=33.54 E-value=5.8e+02 Score=29.39 Aligned_cols=189 Identities=15% Similarity=0.152 Sum_probs=113.4
Q ss_pred HHHHHHhhhcCcceeeeccccccchhhhHHhhhCC---CcccccccccCcchhhhhhhhcccCcCCCccceEEeecCCCC
Q psy8912 319 PEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGL---SDFFDYKEIFPAEKKIKHFANLKKDSKIKYKDMVFFDDEERN 395 (538)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Dldh~~ 395 (538)
+.=|..|+..||..|-..-+-+-+...+.+..|.. .=.|++-|-+-+. ||.+.-+ .-.-.++|+|= .+=
T Consensus 71 ~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~klLyisPErl~~~----~f~~~L~---~~~i~l~vIDE-AHC 142 (590)
T COG0514 71 KDQVDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYISPERLMSP----RFLELLK---RLPISLVAIDE-AHC 142 (590)
T ss_pred HHHHHHHHHcCceeehhhcccCHHHHHHHHHHHhcCceeEEEECchhhcCh----HHHHHHH---hCCCceEEech-HHH
Confidence 34578999999999988888777777777776654 4556666766554 7776655 33345666642 333
Q ss_pred cCCCCCCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccc------ccc
Q psy8912 396 ARSISKLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQH------FDH 469 (538)
Q Consensus 396 ~s~~~p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~y------Fd~ 469 (538)
+| -|+ -.|.+. |...-.+.+.|. ++++..+|+|..+..-..+++.|++..+ ||-
T Consensus 143 iS---qWG---hdFRP~------------Y~~lg~l~~~~~--~~p~~AlTATA~~~v~~DI~~~L~l~~~~~~~~sfdR 202 (590)
T COG0514 143 IS---QWG---HDFRPD------------YRRLGRLRAGLP--NPPVLALTATATPRVRDDIREQLGLQDANIFRGSFDR 202 (590)
T ss_pred Hh---hcC---CccCHh------------HHHHHHHHhhCC--CCCEEEEeCCCChHHHHHHHHHhcCCCcceEEecCCC
Confidence 33 333 001111 112223333333 6788888888888788888999999875 331
Q ss_pred ceeecC--CchHH---HHHHHHHhCCCCC--cEEEEecccccHHhHcc---cCCEEEEECCCCCHHHHHHHHHHHHh
Q psy8912 470 KEIFPG--QKTTH---FANLKKATGIEYK--DMVFFDDEERNSHDVSP---LGVTCIHVKDGMSHSVLHKGLKQWAS 536 (538)
Q Consensus 470 ~~i~~~--~k~~~---~~kal~~lgi~pe--e~l~~eDs~~~I~aAk~---aGi~~i~V~dg~t~~~~~~~l~~~~~ 536 (538)
..+... .+.+. +. .+..+.-.+. -+||+=.+..--+-|.. .|+.+..++.|+..++-+.--.+|..
T Consensus 203 pNi~~~v~~~~~~~~q~~-fi~~~~~~~~~~GIIYc~sRk~~E~ia~~L~~~g~~a~~YHaGl~~~eR~~~q~~f~~ 278 (590)
T COG0514 203 PNLALKVVEKGEPSDQLA-FLATVLPQLSKSGIIYCLTRKKVEELAEWLRKNGISAGAYHAGLSNEERERVQQAFLN 278 (590)
T ss_pred chhhhhhhhcccHHHHHH-HHHhhccccCCCeEEEEeeHHhHHHHHHHHHHCCCceEEecCCCCHHHHHHHHHHHhc
Confidence 111111 11111 22 2221222333 37888776655444433 79999999999999988877777753
No 475
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=33.39 E-value=26 Score=29.29 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=34.5
Q ss_pred chHHHHHHhhhcCcceeeeccc--------------cccchhhhHHhhhCCCcccccccccCcc
Q psy8912 317 DIPEIVKYLKDHNIKLALASRT--------------VHIRNAYSLLHLLGLSDFFDYKEIFPAE 366 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (538)
|-..|+-+||.+|.-|+-.||- |-+..-+-.-+-||+.| +||+|+-
T Consensus 9 h~adI~A~Lkk~G~Sl~~LS~~agls~~tL~n~L~rp~pkgEriIA~algv~P----~eIWp~R 68 (82)
T COG3423 9 HPADIIAALKKKGTSLAALSREAGLSSSTLANALDRPWPKGERIIADALGVPP----EEIWPSR 68 (82)
T ss_pred CHHHHHHHHHHccccHHHHHHHcCCCHHHHHHHHcCCCchHHHHHHHHhCCCH----HHhCchh
Confidence 4457899999999999987763 33444444567889886 8999984
No 476
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=31.86 E-value=1.2e+02 Score=30.80 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=27.4
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~ 464 (538)
+.++|.+|++.|+++-.+||+.+.+. ..+=+.+|+.
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~-~~l~~~l~v~ 63 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEM-LYLQKSLGVQ 63 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHH-HHHHHhcCCC
Confidence 56789999999999999999975532 3344667765
No 477
>PRK08005 epimerase; Validated
Probab=31.67 E-value=2.4e+02 Score=28.01 Aligned_cols=91 Identities=11% Similarity=0.022 Sum_probs=53.8
Q ss_pred CCHHHHHHHhhhCCceEEEEcCCCcH-HHHHHHHHHcCCCCCCcceeecCC---C--CHHHHHHHHHHcCCCCCcEEEEe
Q psy8912 58 RGVPEILRYLKENKCLVAAASRTSEI-LHAKQILNLINLNQYFSNKEIYPG---Q--KTTHFESLKKATGIEYKDMVFFD 131 (538)
Q Consensus 58 pgv~elL~~Lk~~GikiaIvTn~~~p-~~~~~~L~~lgL~~~Fd~ie~~~~---~--Kp~~f~~ale~lgi~P~e~L~IG 131 (538)
+...++|+.+|+.|.+.+++=|...| +..+..+.... +.-..-+.|+ . -|..+.++.+--..-++.-+-|+
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~~vD---~VlvMsV~PGf~GQ~f~~~~~~KI~~l~~~~~~~~I~VD 169 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLD---ALMIMTSEPDGRGQQFIAAMCEKVSQSREHFPAAECWAD 169 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHhcC---EEEEEEecCCCccceecHHHHHHHHHHHHhcccCCEEEE
Confidence 45778999999999999999987664 34444444332 2221122222 2 25566665543333222226676
Q ss_pred CCcc--cHHHHhhcCCeEEEEC
Q psy8912 132 DEER--NSHDVSPLGVTCIHSW 151 (538)
Q Consensus 132 Ds~~--DI~aAk~aG~~tI~V~ 151 (538)
=+.+ .+....++|...+-+.
T Consensus 170 GGI~~~~i~~l~~aGad~~V~G 191 (210)
T PRK08005 170 GGITLRAARLLAAAGAQHLVIG 191 (210)
T ss_pred CCCCHHHHHHHHHCCCCEEEEC
Confidence 6654 5777788899876554
No 478
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=31.27 E-value=3.5e+02 Score=27.93 Aligned_cols=99 Identities=13% Similarity=0.064 Sum_probs=68.6
Q ss_pred cCCCccCCCHHHHHHH---hhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-eecCC---CCHHHHHHHHHHcCCC
Q psy8912 51 GTLIKYYRGVPEILRY---LKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EIYPG---QKTTHFESLKKATGIE 123 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~---Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~~~~---~Kp~~f~~ale~lgi~ 123 (538)
.+.-.++|+..++++. |-+.|+.|.-.+|. . ..+.+.|+..|-......- -+..+ ..|..++.+.++..+
T Consensus 114 ~D~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~-D-~v~a~rLed~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~v- 190 (267)
T CHL00162 114 SDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINA-D-PMLAKHLEDIGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKI- 190 (267)
T ss_pred CCCcccCCChHHHHHHHHHHHHCCCEEeecCCC-C-HHHHHHHHHcCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCC-
Confidence 4456688988877765 66789999999998 4 4566667777743322211 11111 256778888876654
Q ss_pred CCcEEEEeCC---cccHHHHhhcCCeEEEECCCCC
Q psy8912 124 YKDMVFFDDE---ERNSHDVSPLGVTCIHSWLMMS 155 (538)
Q Consensus 124 P~e~L~IGDs---~~DI~aAk~aG~~tI~V~~G~~ 155 (538)
-+++|-. +.|+..|-++|+..++++++..
T Consensus 191 ---pVivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 191 ---PVIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred ---cEEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 4667655 5699999999999999998764
No 479
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=31.20 E-value=31 Score=37.63 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=66.6
Q ss_pred hHHHHHHhhhcCc-ceeeeccccccchhhhHHhhhC-CC--cccc-------cccccCcchhhhhhhhcccCcCCCccce
Q psy8912 318 IPEIVKYLKDHNI-KLALASRTVHIRNAYSLLHLLG-LS--DFFD-------YKEIFPAEKKIKHFANLKKDSKIKYKDM 386 (538)
Q Consensus 318 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 386 (538)
++.++++|.++|+ ++.|++||+ +.|..|..+++ .. ++=. +.=+++++ ...|+-. .+. .++.+.+
T Consensus 193 a~~va~~L~~~g~~~I~V~nRt~--~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT-~a~~~vi-~~~-~~~~~~~ 267 (414)
T PRK13940 193 GELLFRHVTALAPKQIMLANRTI--EKAQKITSAFRNASAHYLSELPQLIKKADIIIAAV-NVLEYIV-TCK-YVGDKPR 267 (414)
T ss_pred HHHHHHHHHHcCCCEEEEECCCH--HHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECc-CCCCeeE-CHH-HhCCCCe
Confidence 4789999999997 599999986 57888888775 21 1101 11233443 3334322 111 1122347
Q ss_pred EEeecC-----CCCcCCCCCCcccccccccchHhh--------hcCCCCccCCCHHHHHHHHHHCCc
Q psy8912 387 VFFDDE-----ERNARSISKLGVIGIQVHRDKVLD--------AGGAIIKYYRDVPAILKYLKQNNC 440 (538)
Q Consensus 387 ~~~Dld-----h~~~s~~~p~~~i~i~~~~~~i~d--------~~~~~v~l~pGv~e~L~~Lk~~Gi 440 (538)
+++||= ++.++.+|.-.++.+.--...+.+ ....+--+-+.+.++++|++.+.+
T Consensus 268 ~~iDLavPRdidp~v~~l~~v~l~~iDdl~~i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~~~~~ 334 (414)
T PRK13940 268 VFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVKSLEEYLEKEKAIIS 334 (414)
T ss_pred EEEEeCCCCCCCccccCcCCeEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 889997 566666665554433322221111 111122355788889999888755
No 480
>PRK10344 DNA-binding transcriptional regulator Nlp; Provisional
Probab=31.03 E-value=30 Score=29.82 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=35.0
Q ss_pred chHHHHHHhhhcCcceeeeccc--------------cccchhhhHHhhhCCCcccccccccCc
Q psy8912 317 DIPEIVKYLKDHNIKLALASRT--------------VHIRNAYSLLHLLGLSDFFDYKEIFPA 365 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (538)
|-..|+.+|+.+|..||-.||. |-+.+=+-.-+.||+.| +||+||
T Consensus 9 H~adI~AaL~KrG~sLa~lsr~~Gls~~TL~nAL~rp~PKgEriIA~aLGv~P----~eIWPs 67 (92)
T PRK10344 9 HPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDP----WVIWPS 67 (92)
T ss_pred CHHHHHHHHHHcCCcHHHHHHHcCCChHHHHHHHcCCCchHHHHHHHHHCcCH----HHhCcc
Confidence 4567999999999999887774 34444455678899987 799998
No 481
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=30.84 E-value=1.7e+02 Score=33.28 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=53.5
Q ss_pred HHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeecCCCCHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q psy8912 60 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGQKTTHFESLKKATGIEYKDMVFFDDEERNSHD 139 (538)
Q Consensus 60 v~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~~~~Kp~~f~~ale~lgi~P~e~L~IGDs~~DI~a 139 (538)
+...|...++.+-++++++-.+....++.+.+.+++. +.............-..-+++.|+ -++|||... ...
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~~~~-~~~ 168 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKANGI----EAVVGAGLI-TDL 168 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHHCCC----CEEEcCchH-HHH
Confidence 4444555566677899998765535666666666653 111111122222333344455666 566899766 689
Q ss_pred HhhcCCeEEEECCC
Q psy8912 140 VSPLGVTCIHSWLM 153 (538)
Q Consensus 140 Ak~aG~~tI~V~~G 153 (538)
|.++|+..+.+.++
T Consensus 169 A~~~g~~g~~~~s~ 182 (538)
T PRK15424 169 AEEAGMTGIFIYSA 182 (538)
T ss_pred HHHhCCceEEecCH
Confidence 99999999998754
No 482
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=30.09 E-value=54 Score=27.86 Aligned_cols=42 Identities=19% Similarity=0.278 Sum_probs=0.0
Q ss_pred hHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCcccccccccCc
Q psy8912 318 IPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSDFFDYKEIFPA 365 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (538)
...+.+.++++|+.|.+++.+|.+ ++.+++.|+.++| .+||.
T Consensus 60 L~~~~~~~~~~g~~l~l~~~~~~v---~~~l~~~gl~~~~---~i~~~ 101 (106)
T TIGR02886 60 ILGRYKKIKNEGGEVIVCNVSPAV---KRLFELSGLFKII---RIYES 101 (106)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHhCCceEE---EEcCC
No 483
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=29.11 E-value=2.7e+02 Score=27.95 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=56.8
Q ss_pred CccCCCHHHHHHHhhhCCceEEEEcCCCcH-HHHHHHHHHcCCCCCCcceeecCCCC--HHHHHHHHH---HcCCCCCcE
Q psy8912 54 IKYYRGVPEILRYLKENKCLVAAASRTSEI-LHAKQILNLINLNQYFSNKEIYPGQK--TTHFESLKK---ATGIEYKDM 127 (538)
Q Consensus 54 ~~l~pgv~elL~~Lk~~GikiaIvTn~~~p-~~~~~~L~~lgL~~~Fd~ie~~~~~K--p~~f~~ale---~lgi~P~e~ 127 (538)
.+..+...++|+.+|+.|++.+++=|-..| +..+..+...++--....--.+++-+ |+.+.++.+ ..+-.-+-.
T Consensus 92 ~E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~~~~ 171 (220)
T COG0036 92 AEATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDERLDIL 171 (220)
T ss_pred eccCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEeECCCCcccccCHHHHHHHHHHHHHhcccCCeE
Confidence 345678899999999999999999998775 55566666554311111111122222 455443332 222111223
Q ss_pred EEEeCCcc--cHHHHhhcCCeEEEECC
Q psy8912 128 VFFDDEER--NSHDVSPLGVTCIHSWL 152 (538)
Q Consensus 128 L~IGDs~~--DI~aAk~aG~~tI~V~~ 152 (538)
+-|+=+.+ .+..+.++|...+-..+
T Consensus 172 IeVDGGI~~~t~~~~~~AGad~~VaGS 198 (220)
T COG0036 172 IEVDGGINLETIKQLAAAGADVFVAGS 198 (220)
T ss_pred EEEeCCcCHHHHHHHHHcCCCEEEEEE
Confidence 44555544 46777778998765544
No 484
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=28.97 E-value=1.9e+02 Score=30.51 Aligned_cols=178 Identities=13% Similarity=0.052 Sum_probs=0.0
Q ss_pred cchHHHHHHhhhcCcceeeecccccc-------------------chhhhHHhhhCCCcccccccccCc-chhhhhh--h
Q psy8912 316 RDIPEIVKYLKDHNIKLALASRTVHI-------------------RNAYSLLHLLGLSDFFDYKEIFPA-EKKIKHF--A 373 (538)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~ 373 (538)
|-+..++++|+++|.+.||.||-=-- |.+..+-.++. -+.+++..=..+ ..-.++| +
T Consensus 52 P~v~~L~~~L~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~-~~V~V~~dR~~~~~~~~~~~~~d 130 (326)
T PF02606_consen 52 PLVIWLARLLQARGYRPAILSRGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKLP-VPVIVGPDRVAAARAALKEFPAD 130 (326)
T ss_pred HHHHHHHHHHHhcCCceEEEcCCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhcC-CcEEEeCcHHHHHHHHHHHCCCC
Q ss_pred hcccCcCCCccce------EEeecC--CCCcCCCC--CCcccccccccchHhhhcCCCCccCCCHHHHHHHHHHCCceEE
Q psy8912 374 NLKKDSKIKYKDM------VFFDDE--ERNARSIS--KLGVIGIQVHRDKVLDAGGAIIKYYRDVPAILKYLKQNNCLVA 443 (538)
Q Consensus 374 ~~~~~~~~~~~~l------~~~Dld--h~~~s~~~--p~~~i~i~~~~~~i~d~~~~~v~l~pGv~e~L~~Lk~~Gikla 443 (538)
-|=-|-+++...| +++|.+ --|--.+| |++. +...+..+..--+.-.+....-.+.....+.++.
T Consensus 131 viilDDGfQh~~L~rDl~Ivl~D~~~~~gng~lLPaG~LRE-----p~~~l~rAD~vi~~~~~~~~~~~~~~~~~~~p~~ 205 (326)
T PF02606_consen 131 VIILDDGFQHRRLKRDLDIVLVDADRPFGNGFLLPAGPLRE-----PLSALKRADAVIVTGCDASDPAIEKAIRPGKPIF 205 (326)
T ss_pred EEEEcCCcccccccCCcEEEEEeCCCCCcCCccCCCCcccC-----ChhHhCcccEEEEcCCCcchhHHHHhhhcCCceE
Q ss_pred EEeCCCchHHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhCCCCCcEEEEec
Q psy8912 444 AASRTTEMLRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATGIEYKDMVFFDD 500 (538)
Q Consensus 444 IASss~~~~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lgi~pee~l~~eD 500 (538)
-++-.... +....-....-..-.....+..-..++.|...++.+|+.+.+.+.|-|
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~l~~~~v~a~sGIg~P~~F~~~L~~~G~~~~~~~~f~D 261 (326)
T PF02606_consen 206 SARLKPEG-LRNLNTGSIEPLKGKPVLAFSGIGNPERFFDTLESLGIEVVGTLAFPD 261 (326)
T ss_pred EEEEEecc-cccccccchhhccCCeeEEEEEcCChHHHHHHHHHcCCeEEEeeECCC
No 485
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=28.46 E-value=1.9e+02 Score=30.41 Aligned_cols=46 Identities=7% Similarity=-0.032 Sum_probs=33.1
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCC--chHHHHHHHhhcCCc
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTT--EMLRAHQLVDLFNWN 464 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~--~~~~a~~~L~~lgL~ 464 (538)
.|-|-.+.|++.+++++++++|+...+.|+.. .++.++ .|...|+.
T Consensus 60 ~GGEPll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~-~L~~~g~~ 107 (358)
T TIGR02109 60 SGGEPLARPDLVELVAHARRLGLYTNLITSGVGLTEARLD-ALADAGLD 107 (358)
T ss_pred eCccccccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHH-HHHhCCCC
Confidence 34466688999999999999999999988753 233444 34445654
No 486
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=28.44 E-value=24 Score=35.80 Aligned_cols=118 Identities=16% Similarity=0.140 Sum_probs=79.7
Q ss_pred hhcccceeeeeeecccccccCCcceEeeccchhHHHHHHHHhcceeeeccceEEEEehhhHHHHh--hcccccCCccccc
Q psy8912 215 ISKLGVIGIQVMHSMTNVLDSNGMVIKYYQDVPRILEYLREHNILVAAVSTTVRILHVQNILEMI--GVARYFDHKEIYP 292 (538)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 292 (538)
+++-|.=..++.|++.+.+-.+|-+.-|-..-. +-..+++|+.-.+++..|++.|-|-..+-+ +....||.
T Consensus 44 VlEaGtGSG~lt~~l~r~v~p~G~v~t~E~~~~--~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~~~~Da----- 116 (247)
T PF08704_consen 44 VLEAGTGSGSLTHALARAVGPTGHVYTYEFRED--RAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELESDFDA----- 116 (247)
T ss_dssp EEEE--TTSHHHHHHHHHHTTTSEEEEEESSHH--HHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-TTSEEE-----
T ss_pred EEEecCCcHHHHHHHHHHhCCCeEEEccccCHH--HHHHHHHHHHHcCCCCCceeEecceecccccccccCcccE-----
Confidence 566677666788889999999999988865433 334488899999999999999988654333 11122221
Q ss_pred ccccccccccccccccccccccccchHHHHHHhhhcCcceeeeccccccchhhhHHhhhCCCc
Q psy8912 293 RQKTKHLKKDRVEDAKGTLLNLYRDIPEIVKYLKDHNIKLALASRTVHIRNAYSLLHLLGLSD 355 (538)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (538)
|- =-||+-+--++.+.+.||..|-.+ ++=||++......+..|.=..
T Consensus 117 -----------vf---LDlp~Pw~~i~~~~~~L~~~gG~i--~~fsP~ieQv~~~~~~L~~~g 163 (247)
T PF08704_consen 117 -----------VF---LDLPDPWEAIPHAKRALKKPGGRI--CCFSPCIEQVQKTVEALREHG 163 (247)
T ss_dssp -----------EE---EESSSGGGGHHHHHHHE-EEEEEE--EEEESSHHHHHHHHHHHHHTT
T ss_pred -----------EE---EeCCCHHHHHHHHHHHHhcCCceE--EEECCCHHHHHHHHHHHHHCC
Confidence 11 137888888888899995556544 455899999888888776555
No 487
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=27.97 E-value=1.6e+02 Score=31.21 Aligned_cols=46 Identities=7% Similarity=0.018 Sum_probs=33.5
Q ss_pred cCCCCccCCCHHHHHHHHHHCCceEEEEeCCC--chHHHHHHHhhcCCc
Q psy8912 418 GGAIIKYYRDVPAILKYLKQNNCLVAAASRTT--EMLRAHQLVDLFNWN 464 (538)
Q Consensus 418 ~~~~v~l~pGv~e~L~~Lk~~GiklaIASss~--~~~~a~~~L~~lgL~ 464 (538)
.|-|-.+.|++.+++++++++|+...+.|+.. .++.++ .|...|+.
T Consensus 69 ~GGEPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~-~L~~~g~~ 116 (378)
T PRK05301 69 SGGEPLLRKDLEELVAHARELGLYTNLITSGVGLTEARLA-ALKDAGLD 116 (378)
T ss_pred ECCccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHH-HHHHcCCC
Confidence 34567788999999999999999999988753 223443 45555654
No 488
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=27.89 E-value=65 Score=29.96 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=27.1
Q ss_pred ccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q psy8912 423 KYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLV 458 (538)
Q Consensus 423 ~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L 458 (538)
...+.+.++++.+|++|+++++-|+...++..+.++
T Consensus 72 l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il 107 (147)
T TIGR02826 72 WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELV 107 (147)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Confidence 345789999999999999999999754443333444
No 489
>COG1546 CinA Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only]
Probab=27.30 E-value=1e+02 Score=29.51 Aligned_cols=48 Identities=23% Similarity=0.151 Sum_probs=36.2
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC
Q psy8912 428 VPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG 475 (538)
Q Consensus 428 v~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~ 475 (538)
...+.+.|+++|..++.|=|+.---.+..+.+.=|-.+||+...+...
T Consensus 10 a~~v~~~L~~~g~tlatAEScTgGlla~~lt~i~GaS~~f~gg~VtYS 57 (162)
T COG1546 10 AEAVGELLKERGLTLATAESCTGGLLAAALTDIPGASAVFEGGFVTYS 57 (162)
T ss_pred HHHHHHHHHHcCCEEEEEecchhHHHHHHHHcCCCcHHHhCCceEEEc
Confidence 456778899999999999988766556666677788899995444333
No 490
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=26.91 E-value=52 Score=33.58 Aligned_cols=86 Identities=21% Similarity=0.203 Sum_probs=49.8
Q ss_pred HHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec-CCCCH--HHHHHHHHHcCCCC--CcEEEEeCCc-cc
Q psy8912 63 ILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-PGQKT--THFESLKKATGIEY--KDMVFFDDEE-RN 136 (538)
Q Consensus 63 lL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~-~~~Kp--~~f~~ale~lgi~P--~e~L~IGDs~-~D 136 (538)
+|+.|...-++++-+--+.+|..-+---.-..+.+|+.+-.+. |.++. +.|+.-++.+|++| +++-||+|.. +-
T Consensus 38 flr~Lgpepw~vAYVqPsrRP~DGRYGeNPNRLq~y~QfQViiKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsP 117 (279)
T cd00733 38 FLRALGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVIIKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESP 117 (279)
T ss_pred HHHhcCCCcceeccccCCCCCCCCCcCCCchhhhhheeeEEEECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCC
Confidence 4555555556666665543421100000001122444443332 33322 67999999999998 8999999985 56
Q ss_pred HHHHhhcCCeEE
Q psy8912 137 SHDVSPLGVTCI 148 (538)
Q Consensus 137 I~aAk~aG~~tI 148 (538)
..+|...|+.+.
T Consensus 118 TLGAwGLGWEVW 129 (279)
T cd00733 118 TLGAWGLGWEVW 129 (279)
T ss_pred cccccccccEEE
Confidence 788888888643
No 491
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=26.84 E-value=4.1e+02 Score=26.23 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=63.7
Q ss_pred cCCCHHHHHHHHHHCC--ceEEEEeCCCchHHHHHHHhhcCCccccccceeec---------C------CchHHHHHHHH
Q psy8912 424 YYRDVPAILKYLKQNN--CLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFP---------G------QKTTHFANLKK 486 (538)
Q Consensus 424 l~pGv~e~L~~Lk~~G--iklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~---------~------~k~~~~~kal~ 486 (538)
..++..+.++.+++.+ .++++.+.+. .+.++.+.+ .|+. .+......+ . ++.....+.++
T Consensus 49 ~~~~~~~~i~~l~~~~~~~~~~~l~~~~-~~~i~~a~~-~g~~-~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~ 125 (265)
T cd03174 49 QMEDDWEVLRAIRKLVPNVKLQALVRNR-EKGIERALE-AGVD-EVRIFDSASETHSRKNLNKSREEDLENAEEAIEAAK 125 (265)
T ss_pred cCCCHHHHHHHHHhccCCcEEEEEccCc-hhhHHHHHh-CCcC-EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 5578899999999887 7885555553 335554444 4532 111000011 0 11112444556
Q ss_pred HhCCCCCcEEEEecccc----------cHHhHcccCCEEEEECC---CCCHHHHHHHHHHHHh
Q psy8912 487 ATGIEYKDMVFFDDEER----------NSHDVSPLGVTCIHVKD---GMSHSVLHKGLKQWAS 536 (538)
Q Consensus 487 ~lgi~pee~l~~eDs~~----------~I~aAk~aGi~~i~V~d---g~t~~~~~~~l~~~~~ 536 (538)
+.|+.. .+.++|... -++.+.++|+..+.+.| .++..++.+-+...++
T Consensus 126 ~~G~~v--~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~i~l~Dt~G~~~P~~v~~li~~l~~ 186 (265)
T cd03174 126 EAGLEV--EGSLEDAFGCKTDPEYVLEVAKALEEAGADEISLKDTVGLATPEEVAELVKALRE 186 (265)
T ss_pred HCCCeE--EEEEEeecCCCCCHHHHHHHHHHHHHcCCCEEEechhcCCcCHHHHHHHHHHHHH
Confidence 677643 556666665 36667789999999987 3666677776665544
No 492
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=26.72 E-value=99 Score=26.33 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=29.0
Q ss_pred HHHHHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCC-CCc
Q psy8912 60 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ-YFS 100 (538)
Q Consensus 60 v~elL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~-~Fd 100 (538)
..++.+.++.+|.++.++.-++. +...++..|+.. .|.
T Consensus 62 l~~~~~~~~~~g~~l~l~g~~~~---v~~~l~~~gl~~~~~~ 100 (109)
T cd07041 62 LLRLARALRLLGARTILTGIRPE---VAQTLVELGIDLSGIR 100 (109)
T ss_pred HHHHHHHHHHcCCeEEEEeCCHH---HHHHHHHhCCChhhce
Confidence 45677778889999998887744 788899999876 443
No 493
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=26.71 E-value=2.8e+02 Score=26.49 Aligned_cols=104 Identities=10% Similarity=0.024 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHCCceEEEEeCCCch----HHHHHHHhhcCCccccccceeecCCchHHHHHHHHHhC---CCCCcEEEE
Q psy8912 426 RDVPAILKYLKQNNCLVAAASRTTEM----LRAHQLVDLFNWNQHFDHKEIFPGQKTTHFANLKKATG---IEYKDMVFF 498 (538)
Q Consensus 426 pGv~e~L~~Lk~~GiklaIASss~~~----~~a~~~L~~lgL~~yFd~~~i~~~~k~~~~~kal~~lg---i~pee~l~~ 498 (538)
++..++.+.|+++|+..-...--... ......+..+. -||.+.+.+..-++.+.+.+...+ ...-.++.+
T Consensus 8 ~~~~~l~~~L~~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~iiftS~~av~~~~~~~~~~~~~~~~~~~~~av 84 (239)
T cd06578 8 PQADELAALLEALGAEVLELPLIEIEPLDDAELDAALADLD---EYDWLIFTSPNAVEAFFEALEELGLRALAGLKIAAV 84 (239)
T ss_pred HHhHHHHHHHHHcCCcEEEeeeEEEecCChHHHHHHHHhcC---CCCEEEEECHHHHHHHHHHHHhhCCccccCCEEEEE
Confidence 34567788888888854433211110 12233444333 556545555566777777766542 344456677
Q ss_pred ecccccHHhHcccCCEEEEECCCCCHHHHHHHHHHH
Q psy8912 499 DDEERNSHDVSPLGVTCIHVKDGMSHSVLHKGLKQW 534 (538)
Q Consensus 499 eDs~~~I~aAk~aGi~~i~V~dg~t~~~~~~~l~~~ 534 (538)
|.... +++++.|..++.++.+.+.+..-+.+.+.
T Consensus 85 G~~Ta--~~l~~~g~~~~~~~~~~~~~~L~~~i~~~ 118 (239)
T cd06578 85 GPKTA--EALREAGLTADFVPEEGDSEGLLELLELQ 118 (239)
T ss_pred CHHHH--HHHHHcCCCceeCCCccCHHHHHHHHHhc
Confidence 77765 46677888888887777777766666653
No 494
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=26.46 E-value=1.9e+02 Score=30.70 Aligned_cols=86 Identities=16% Similarity=0.130 Sum_probs=52.9
Q ss_pred HHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCCccccccceeecC--CchHH-------HHHHHHHh-CCCCCcEEEE
Q psy8912 429 PAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNWNQHFDHKEIFPG--QKTTH-------FANLKKAT-GIEYKDMVFF 498 (538)
Q Consensus 429 ~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL~~yFd~~~i~~~--~k~~~-------~~kal~~l-gi~pee~l~~ 498 (538)
+.++++|+++|+.+-|.+... +.+..+|+.+|+. |.- ++.. ..... ..++++.. +.+|+ +++-
T Consensus 17 k~~I~eL~~~GheV~it~R~~--~~~~~LL~~yg~~-y~~---iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pD-v~is 89 (335)
T PF04007_consen 17 KNIIRELEKRGHEVLITARDK--DETEELLDLYGID-YIV---IGKHGDSLYGKLLESIERQYKLLKLIKKFKPD-VAIS 89 (335)
T ss_pred HHHHHHHHhCCCEEEEEEecc--chHHHHHHHcCCC-eEE---EcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-EEEe
Confidence 456788899999999998765 3677899998873 322 3322 21111 11111111 23553 4444
Q ss_pred ecccccHHhHcccCCEEEEECCC
Q psy8912 499 DDEERNSHDVSPLGVTCIHVKDG 521 (538)
Q Consensus 499 eDs~~~I~aAk~aGi~~i~V~dg 521 (538)
.-|.....+|.-.|+.+|.+.|.
T Consensus 90 ~~s~~a~~va~~lgiP~I~f~D~ 112 (335)
T PF04007_consen 90 FGSPEAARVAFGLGIPSIVFNDT 112 (335)
T ss_pred cCcHHHHHHHHHhCCCeEEEecC
Confidence 45555566777899999998884
No 495
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=26.41 E-value=2.9e+02 Score=28.16 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=60.5
Q ss_pred cCCCccCCCHHHHHHH---hhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcce-eecCC---CCHHHHHHHHHHcCCC
Q psy8912 51 GTLIKYYRGVPEILRY---LKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EIYPG---QKTTHFESLKKATGIE 123 (538)
Q Consensus 51 ~~~~~l~pgv~elL~~---Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~i-e~~~~---~Kp~~f~~ale~lgi~ 123 (538)
.+.-.++|+..++++. |.+.|+.|.-.++. . ...-+.|+..|-......- -+..+ ..|..++.+.++.++
T Consensus 100 ~D~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~-D-~v~akrL~d~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~v- 176 (247)
T PF05690_consen 100 GDDKTLLPDPIETLKAAEILVKEGFVVLPYCTD-D-PVLAKRLEDAGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADV- 176 (247)
T ss_dssp S-TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S---HHHHHHHHHTT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSS-
T ss_pred CCCCCcCCChhHHHHHHHHHHHCCCEEeecCCC-C-HHHHHHHHHCCCCEEEecccccccCcCCCCHHHHHHHHHhcCC-
Confidence 5556788998887765 66789999999998 4 4555667777743322210 11111 356788899999977
Q ss_pred CCcEEEEeCC---cccHHHHhhcCCeEEEECCC
Q psy8912 124 YKDMVFFDDE---ERNSHDVSPLGVTCIHSWLM 153 (538)
Q Consensus 124 P~e~L~IGDs---~~DI~aAk~aG~~tI~V~~G 153 (538)
-++|+-+ ++|...|-++|+..|++++.
T Consensus 177 ---PvIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 177 ---PVIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp ---SBEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 4556654 57899999999999999853
No 496
>TIGR02666 moaA molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine.
Probab=26.15 E-value=1.7e+02 Score=30.59 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=30.7
Q ss_pred CCCCccCCCHHHHHHHHHH-CCc-eEEEEeCCCchHHHHHHHhhcCCc
Q psy8912 419 GAIIKYYRDVPAILKYLKQ-NNC-LVAAASRTTEMLRAHQLVDLFNWN 464 (538)
Q Consensus 419 ~~~v~l~pGv~e~L~~Lk~-~Gi-klaIASss~~~~~a~~~L~~lgL~ 464 (538)
|-|-.+.|++.++++.+++ .|+ .+.+.|+...-......|...|+.
T Consensus 67 GGEPll~~~l~~li~~i~~~~gi~~v~itTNG~ll~~~~~~L~~~gl~ 114 (334)
T TIGR02666 67 GGEPLLRKDLVELVARLAALPGIEDIALTTNGLLLARHAKDLKEAGLK 114 (334)
T ss_pred CccccccCCHHHHHHHHHhcCCCCeEEEEeCchhHHHHHHHHHHcCCC
Confidence 3455678999999999988 689 899988653211122345556664
No 497
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=25.46 E-value=53 Score=33.61 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCC--CcEEEEeCCc-ccHHHHhhcCCeEE
Q psy8912 111 THFESLKKATGIEY--KDMVFFDDEE-RNSHDVSPLGVTCI 148 (538)
Q Consensus 111 ~~f~~ale~lgi~P--~e~L~IGDs~-~DI~aAk~aG~~tI 148 (538)
+.|+.-++.+|++| +++-||+|.. +-..+|...|+.+.
T Consensus 93 elYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 133 (283)
T PRK09348 93 ELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVW 133 (283)
T ss_pred HHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEEE
Confidence 67999999999998 7999999985 56788888888643
No 498
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=25.36 E-value=58 Score=33.49 Aligned_cols=86 Identities=20% Similarity=0.224 Sum_probs=49.8
Q ss_pred HHHHhhhCCceEEEEcCCCcHHHHHHHHHHcCCCCCCcceeec-CCCCH--HHHHHHHHHcCCCC--CcEEEEeCCc-cc
Q psy8912 63 ILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-PGQKT--THFESLKKATGIEY--KDMVFFDDEE-RN 136 (538)
Q Consensus 63 lL~~Lk~~GikiaIvTn~~~p~~~~~~L~~lgL~~~Fd~ie~~-~~~Kp--~~f~~ale~lgi~P--~e~L~IGDs~-~D 136 (538)
+|+.|...-++++-+--+.+|..-+---+-..+.+|+.+-.+. |.+.. +.|+.-++.+|++| +++-||+|.. +-
T Consensus 39 flralgpepw~vAYVqPsRRP~DGRYGeNPNRLq~yyQfQVilKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsP 118 (293)
T TIGR00388 39 FLRSLGPEPWAVAYVEPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENP 118 (293)
T ss_pred HHHhcCCCcceeccccCCCCCCCCCCCCCchhhhheeeeEEEECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCC
Confidence 4555555556666655543421100000001122455543333 22222 67999999999998 8999999985 56
Q ss_pred HHHHhhcCCeEE
Q psy8912 137 SHDVSPLGVTCI 148 (538)
Q Consensus 137 I~aAk~aG~~tI 148 (538)
...|.-.|+.+.
T Consensus 119 TLGAwGlGWEVW 130 (293)
T TIGR00388 119 TLGAWGLGWEVW 130 (293)
T ss_pred cccccccccEEE
Confidence 788888888643
No 499
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=25.34 E-value=1.8e+02 Score=32.83 Aligned_cols=67 Identities=19% Similarity=0.205 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHCCceEEEEeCCCchHHHHHHHhhcCC-----ccccccceeecC-----------------CchHHHH
Q psy8912 425 YRDVPAILKYLKQNNCLVAAASRTTEMLRAHQLVDLFNW-----NQHFDHKEIFPG-----------------QKTTHFA 482 (538)
Q Consensus 425 ~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~L~~lgL-----~~yFd~~~i~~~-----------------~k~~~~~ 482 (538)
++++.++.+.|.+.|+.+ ++|... ...|+..|+ .+|-.+.++-.+ +.++| .
T Consensus 14 K~~iv~lAk~L~~lGfeI-~AT~GT-----ak~L~e~GI~v~~V~k~TgfpEil~GRVKTLHP~IhgGiLa~r~~~~h-~ 86 (513)
T PRK00881 14 KTGIVEFAKALVELGVEI-LSTGGT-----AKLLAEAGIPVTEVSDVTGFPEILDGRVKTLHPKIHGGILARRDNPEH-V 86 (513)
T ss_pred cccHHHHHHHHHHCCCEE-EEcchH-----HHHHHHCCCeeEEeecccCCchhcCCccccCCchhhhhhccCCCCHHH-H
Confidence 789999999999999999 466442 347888887 455555555444 12222 4
Q ss_pred HHHHHhCCCCCcEEEE
Q psy8912 483 NLKKATGIEYKDMVFF 498 (538)
Q Consensus 483 kal~~lgi~pee~l~~ 498 (538)
+.++++|+.|=++|++
T Consensus 87 ~~l~~~~i~~IDlVvv 102 (513)
T PRK00881 87 AALEEHGIEPIDLVVV 102 (513)
T ss_pred HHHHHcCCCceeEEEE
Confidence 5678899999888874
No 500
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=25.32 E-value=93 Score=32.76 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCccCCCHHHHHHHHHHCCceEEEEeCCCchHHHHHH
Q psy8912 421 IIKYYRDVPAILKYLKQNNCLVAAASRTTEMLRAHQL 457 (538)
Q Consensus 421 ~v~l~pGv~e~L~~Lk~~GiklaIASss~~~~~a~~~ 457 (538)
|-.++|.+.+++++++++|+.++|.|+...++.++.+
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~e~l~~L 176 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRPDVLEKL 176 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCHHHHHHH
Confidence 4557899999999999999999999988666444433
Done!