BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8915
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1LVC2|JARD2_DANRE Protein Jumonji OS=Danio rerio GN=jarid2b PE=3 SV=2
Length = 1319
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNST 60
M MYF + P AEVE ++W V R H+ VH +DT ++G GFP K+
Sbjct: 903 MMMYFNKE--------PGAAEVEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEP 954
Query: 61 FAKHPWNLKVLTNNSASILRSLNSL--------------------VDRISFGKIDFGFEI 100
F+KH WNL VL NNS SILR L ++ D+ ID+
Sbjct: 955 FSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTG 1014
Query: 101 IEFLLPISPRYGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSL 160
+ + Y IP E T + +L + + MI P +L +G+ +
Sbjct: 1015 ADCIW-----YSIPAEEKTKLDKVVHTLL--QANGTPGLEMLEKNVMISPEVLCREGIKV 1067
Query: 161 SRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
R VQ+ GQF++VFP AF S + GY V+E+V+FA P W++ K K R+
Sbjct: 1068 HRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRR 1121
>sp|Q62315|JARD2_MOUSE Protein Jumonji OS=Mus musculus GN=Jarid2 PE=1 SV=1
Length = 1234
Score = 120 bits (302), Expect = 6e-27, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 17 PSPAEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSA 76
P+PAE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+
Sbjct: 839 PAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTG 898
Query: 77 SILRSLNSLVDRISFGKIDFG--------------FEIIEFLLPISP--RYGIPDEHSTA 120
SILR L + V ++ ++ G I++L + Y IP E
Sbjct: 899 SILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENK 957
Query: 121 FRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTS 180
+ +L + L S+V MI P +L +KG+ + R VQ+ GQF++ FP +F S
Sbjct: 958 LEDVVHTLLQGNGTPGLQM-LESNV-MISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVS 1015
Query: 181 SIATGYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
+ GY V+E+V+FA W S K K R
Sbjct: 1016 KVCCGYNVSETVHFATTQWTSMGFETAKEMKRRH 1049
>sp|Q92833|JARD2_HUMAN Protein Jumonji OS=Homo sapiens GN=JARID2 PE=1 SV=2
Length = 1246
Score = 120 bits (300), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 17 PSPAEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSA 76
P+PAE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+
Sbjct: 841 PAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTG 900
Query: 77 SILRSLNSLVDRISFGKIDFG--------------FEIIEFLLPISP--RYGIPDEHSTA 120
SILR L + V ++ ++ G I++L + Y IP E
Sbjct: 901 SILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENK 959
Query: 121 FRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTS 180
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S
Sbjct: 960 LEDVVHTLLQANGTPGLQM-LESNV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVS 1017
Query: 181 SIATGYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
+ GY V+E+V+FA W S K K R
Sbjct: 1018 KVCCGYSVSETVHFATTQWTSMGFETAKEMKRRH 1051
>sp|Q5F363|JARD2_CHICK Protein Jumonji OS=Gallus gallus GN=JARID2 PE=2 SV=1
Length = 1233
Score = 116 bits (291), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 33/221 (14%)
Query: 17 PSPAEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSA 76
P+ AEVE E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+
Sbjct: 830 PTVAEVEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTG 889
Query: 77 SILRSLNSLV--------------------DRISFGKIDF---GFEIIEFLLPISPRYGI 113
SILR L ++ D+ ID+ G + I + +P + +
Sbjct: 890 SILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKL 949
Query: 114 PDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILV 173
D T ++ + L S+V MI P +L ++G+ + R VQ+ GQF++
Sbjct: 950 DDVVHTLLQAN---------GTPGLEMLESNV-MISPEILCKEGIRVHRTVQQSGQFVVC 999
Query: 174 FPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
FP +F S + GY V+E+V+FA W S + K K R+
Sbjct: 1000 FPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRR 1040
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKN- 58
MA FK+D N P VE EFW V + + V + A I + G GFP + N
Sbjct: 400 MADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNK 459
Query: 59 -------STFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+A WNL V+ S+L +N+ + + + G F I
Sbjct: 460 RHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 519
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 520 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMS 578
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 579 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 638
Query: 215 YCL 217
YC+
Sbjct: 639 YCV 641
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FK+D N P VE EFW V + + V + A I + G GFP
Sbjct: 359 MADSFKADYSNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSK 418
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
T + +A WNL V+ S+L +N+ + + + G F I
Sbjct: 419 RHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 478
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 479 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMS 537
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 538 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 597
Query: 215 YCL 217
YC+
Sbjct: 598 YCV 600
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FK+D N P VE EFW V + + V + A I + G GFP
Sbjct: 400 MADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSK 459
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
T + +A WNL V+ S+L +N+ + + + G F I
Sbjct: 460 RHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 519
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 520 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMS 578
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 579 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 638
Query: 215 YCL 217
YC+
Sbjct: 639 YCV 641
>sp|Q9US53|JMJ2_SCHPO Jumonji/ARID domain-containing protein 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=jmj2 PE=4 SV=1
Length = 715
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPT-AKN--STFAKHPWNLKVLTNNSAS 77
VE E+W V + + V + A + T G FP+ AKN + ++K WNL V+ + + S
Sbjct: 380 VEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGS 439
Query: 78 ILRSLNSLVDRISFGKIDFGFEIIEFLLPISPRY----------------GIPDEHSTAF 121
+L +++ V I+ + G F + Y GIP + + F
Sbjct: 440 LLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQAERF 499
Query: 122 RSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSS 181
+ + P + K + L MI P L ++GV + + Q P +F++ FP +F +
Sbjct: 500 ERAALDIAPDLVKKQKDL-LYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAG 558
Query: 182 IATGYLVAESVYFARPSWL 200
I G+ + E+V FA WL
Sbjct: 559 INHGFNINEAVNFAPKDWL 577
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 75.5 bits (184), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS 59
MA FKSD N P VE EFW V++ + V + A I + G GFP + +
Sbjct: 390 MADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSK 449
Query: 60 T--------FAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+A WNL V+ S+L +N+ + + + G F I
Sbjct: 450 QNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 509
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 510 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDL-LHQLVTLMNPNTLMS 568
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 569 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 628
Query: 215 YCL 217
YC+
Sbjct: 629 YCV 631
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FK+D N P VE EFW V + + V + A I + G GFP
Sbjct: 400 MADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSK 459
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
T + +A WNL V+ S+L +N+ + + + G F I
Sbjct: 460 RHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 519
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 520 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMS 578
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 579 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 638
Query: 215 YCL 217
YC+
Sbjct: 639 YCV 641
>sp|Q8GUI6|JMJ14_ARATH Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana
GN=JMJ14 PE=1 SV=1
Length = 954
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 31/241 (12%)
Query: 4 YFKS-DNPNDPGSN-----PSPAEVESEFWNHVTNRMLHICVH-SASIDTGSNGCGFPTA 56
YF+S D+P S P ++E E+W V + V+ A ++T G GFP
Sbjct: 193 YFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKY 252
Query: 57 K-------NSTFAKHPWNLKVLTNNSASILRSLNSLVDRI--------------SFGKID 95
K +++ WNL L+ S+L + + + + D
Sbjct: 253 KPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVED 312
Query: 96 FGFEIIEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLL 153
+ +L P+ YGIP H+ +F + M P + L V + P +L
Sbjct: 313 HHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDL-LHQLVTQLSPRIL 371
Query: 154 TEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTR 213
E+GV + R VQ G+FIL FP A+ S G+ AE+V A WL + + Y +
Sbjct: 372 KEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQ 431
Query: 214 Q 214
+
Sbjct: 432 R 432
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--- 56
MA FK+D + P VE EFW V++ + V + A I + G GFP +
Sbjct: 393 MADSFKADYFSMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQ 452
Query: 57 -----KNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ +A WNL V+ S+L +N+ + + + G F I
Sbjct: 453 RILSPEEEEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 512
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 513 SYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQPDL-LHQLVTLMNPNTLMS 571
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 572 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 631
Query: 215 YCL 217
YC+
Sbjct: 632 YCV 634
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS 59
MA FKSD N P +E EFW V++ + V + A I G GFP + +
Sbjct: 390 MADSFKSDYFNMPVHMVPTELLEKEFWRLVSSIEEDVTVEYGADIHYKEFGSGFPVSNSK 449
Query: 60 T--------FAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+A WNL V+ + S+L +N+ + + + G F I
Sbjct: 450 QNLSPEEKEYATSGWNLNVMPVLAQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 509
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 510 SYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDL-LHQLVTLMNPNTLMS 568
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 569 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRR 628
Query: 215 YCL 217
YC+
Sbjct: 629 YCV 631
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 72.4 bits (176), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--- 56
MA FKSD N P VE EFW V++ + V + A I + G GFP
Sbjct: 369 MADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGR 428
Query: 57 -----KNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ +A WNL + S+L +N + + + G F I
Sbjct: 429 RKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHW 488
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P++L E
Sbjct: 489 SYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLME 547
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + Y+ R+
Sbjct: 548 HGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRR 607
Query: 215 YCL 217
+C+
Sbjct: 608 HCV 610
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--- 56
MA FKSD N P VE EFW V++ + V + A I + G GFP
Sbjct: 369 MADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQ 428
Query: 57 -----KNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ +A WNL + S+L +N + + + G F I
Sbjct: 429 RKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHW 488
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P++L E
Sbjct: 489 SYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLME 547
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + Y+ R+
Sbjct: 548 HGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRR 607
Query: 215 YCL 217
+C+
Sbjct: 608 HCV 610
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FK+D N P VE EFW V++ + V + A I + G GFP
Sbjct: 399 MADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSK 458
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ + +A WNL V+ S+L +N+ + + + G F I
Sbjct: 459 WDLSPEEKEYAACGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHW 518
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + M L P S + L V ++ P+ L
Sbjct: 519 SYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQPDL-LHQLVTLMNPNTLMS 577
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQ 214
GV + R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+
Sbjct: 578 HGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRR 637
Query: 215 YCL 217
YC+
Sbjct: 638 YCV 640
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAK-------NSTFAKHPWNLKVLTN 73
VE EFW V++ + V + A + T +G GFPT + +A+ WNL L
Sbjct: 545 VEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPL 604
Query: 74 NSASILRSLNSLVDRISFGKIDFGFEI--------------IEFLLPISPR--YGIPDEH 117
SIL +N+ + ++ + G I +L P+ YG+P
Sbjct: 605 LEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSC 664
Query: 118 STAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSA 177
+ F TM P S + L V ++ P++L V + R Q G+F++ FP A
Sbjct: 665 AEQFEETMKQAAPELFSSQPDL-LHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRA 723
Query: 178 FTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ + GY AE+V FA WL Y R++C+
Sbjct: 724 YHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCV 764
>sp|Q3U2K5|KDM4D_MOUSE Lysine-specific demethylase 4D OS=Mus musculus GN=Kdm4d PE=2 SV=2
Length = 510
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP + + +L VA+I P++L E G+ R+ QE G+F
Sbjct: 210 YAVPPEHGRRLERLARELFPGSSQGCQA-FLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>sp|Q6B0I6|KDM4D_HUMAN Lysine-specific demethylase 4D OS=Homo sapiens GN=KDM4D PE=1 SV=3
Length = 523
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 95 DFGFEIIEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSL 152
D I +L P+ Y +P EH LFP R L VA+I P++
Sbjct: 195 DMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAF-LRHKVALISPTV 253
Query: 153 LTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
L E G+ +R+ QE G+F++ FP + + G+ AE++ FA P W+
Sbjct: 254 LKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWI 301
>sp|A1A5Q5|KDM4D_RAT Lysine-specific demethylase 4D OS=Rattus norvegicus GN=Kdm4d PE=2
SV=1
Length = 510
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP + + +L VA+I P++L E G+ R+ QE G+F
Sbjct: 210 YAVPPEHGRRLELLAKELFPGSSQGCQA-FLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 94/244 (38%), Gaps = 29/244 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS 59
MA FKSD N P VE EFW V+ + V + A I + G GFP ++
Sbjct: 360 MADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPV-RDG 418
Query: 60 TFAKHP---------WNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS-- 108
F P WNL + S+L + + + + + G F I
Sbjct: 419 KFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDH 478
Query: 109 ------------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLT 154
P+ YG P + M L P S + L V ++ P+ L
Sbjct: 479 WSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDL-LHQLVTIMNPNTLM 537
Query: 155 EKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYK-TR 213
GV + R Q G+F++ FP A+ S G+ AE+V F WL + + Y+
Sbjct: 538 AHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLS 597
Query: 214 QYCL 217
+YC+
Sbjct: 598 RYCV 601
>sp|B2RXH2|KDM4E_HUMAN Lysine-specific demethylase 4E OS=Homo sapiens GN=KDM4E PE=1 SV=1
Length = 506
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP R + +L VA+I P++L E G+ + + QE G+F
Sbjct: 210 YVVPPEHGQHLERLARELFPDISRGCEA-FLRHKVALISPTVLKENGIPFNCMTQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 94/244 (38%), Gaps = 29/244 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS 59
MA FKSD N P VE EFW V + V + A I + G GFP K
Sbjct: 371 MADSFKSDYFNMPVHMVPTELVEKEFWRLVGTIQEDVTVEYGADIASKEFGSGFPI-KGG 429
Query: 60 TFAKHP---------WNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS-- 108
F P WNL + + S+L + + + ++ + G F I
Sbjct: 430 RFKIAPHDEKYLQCGWNLNNMAMMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDH 489
Query: 109 ------------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLT 154
P+ YG P + + M L P S + L V ++ P+ L
Sbjct: 490 WSYSINYLHWGEPKTWYGAPGFAAEQLEAVMKKLAPELFDSQPDL-LHQLVTIMNPNTLM 548
Query: 155 EKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-R 213
GV + R Q G+F++ FP ++ S G+ AE+V F W+ + Y+
Sbjct: 549 AHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLH 608
Query: 214 QYCL 217
+YC+
Sbjct: 609 RYCV 612
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae
GN=rbr-2 PE=3 SV=2
Length = 1482
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 91/240 (37%), Gaps = 33/240 (13%)
Query: 4 YFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKN---- 58
YF DN S S +E EFW +V + + V + A + T G GFP ++
Sbjct: 408 YFGVDNV----SKVSCDALEKEFWKNVVSHDNPVAVKYGADLITSRVGSGFPRKEDKHTG 463
Query: 59 ------STFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPR-- 110
+A H WNL + S S+L N+ + + + G F
Sbjct: 464 PDSKLKQQYANHAWNLNNMPVLSESVLSYFNTGISGMMVPWVYVGMCFSTFCWHTEDHWT 523
Query: 111 --------------YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEK 156
YG+ + + F + L P + ++ A PSLL
Sbjct: 524 YSVNYNHFGERKIWYGVGGDDAEKFEEALKRLAPGLTGRQRDLFHHMTTAA-NPSLLRSL 582
Query: 157 GVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY-KTRQY 215
GV + V Q G+F++ FP A+ + G AE+V FA WL+ + Y R+Y
Sbjct: 583 GVPIYSVHQNAGEFVITFPRAYHAGYNEGLNFAEAVNFAPIDWLAKGRECVQSYSNVRRY 642
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FKSD N P VE EFW V+ + V + A I + G GFP
Sbjct: 385 MADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGK 444
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ + + WNL + S+L + + + + + G F I
Sbjct: 445 IKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHW 504
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + + M L P S + L V ++ P+ L
Sbjct: 505 SYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDL-LHQLVTIMNPNTLMT 563
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYK-TRQ 214
V + R Q G+F++ FP A+ S G+ AE+V F WL + + Y+ +
Sbjct: 564 HEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHR 623
Query: 215 YCL 217
YC+
Sbjct: 624 YCV 626
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 27/243 (11%)
Query: 1 MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP----- 54
MA FKSD N P VE EFW V+ + V + A I + G GFP
Sbjct: 385 MADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGK 444
Query: 55 ---TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPIS--- 108
+ + + WNL + S+L + + + + + G F I
Sbjct: 445 IKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHW 504
Query: 109 -----------PR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
P+ YG+P + + M L P S + L V ++ P+ L
Sbjct: 505 SYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDL-LHQLVTIMNPNTLMT 563
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYK-TRQ 214
V + R Q G+F++ FP A+ S G+ AE+V F WL + + Y+ +
Sbjct: 564 HEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHR 623
Query: 215 YCL 217
YC+
Sbjct: 624 YCV 626
>sp|P39956|RPH1_YEAST DNA damage-responsive transcriptional repressor RPH1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RPH1 PE=1 SV=1
Length = 796
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP E F M FP ++ +L + + P LL E G+ + +V G+F
Sbjct: 256 YSIPQEDRFKFYKFMQEQFPEEAKNCPE-FLRHKMFLASPKLLQENGIRCNEIVHHEGEF 314
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY 210
++ +P + + GY +AESV FA WL ++ K +
Sbjct: 315 MITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCH 354
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans
GN=rbr-2 PE=1 SV=2
Length = 1477
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 82/222 (36%), Gaps = 29/222 (13%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKN----------STFAKHPWNLKV 70
VE FW +V + + V + A + T G GFP ++ +A H WNL
Sbjct: 419 VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNN 478
Query: 71 LTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPR----------------YGIP 114
+ S+L N+ + + + G F YG+
Sbjct: 479 MPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVG 538
Query: 115 DEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVF 174
E + F + + P + ++ A P LL GV + V Q G+F++ F
Sbjct: 539 GEDAEKFEDALKKIAPGLTGRQRDLFHHMTTAA-NPHLLRSLGVPIHSVHQNAGEFVITF 597
Query: 175 PSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY-KTRQY 215
P A+ + G AE+V FA WLS + Y R+Y
Sbjct: 598 PRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRY 639
>sp|Q9H3R0|KDM4C_HUMAN Lysine-specific demethylase 4C OS=Homo sapiens GN=KDM4C PE=1 SV=2
Length = 1056
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R+ +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRKDMVKI 317
>sp|Q8VCD7|KDM4C_MOUSE Lysine-specific demethylase 4C OS=Mus musculus GN=Kdm4c PE=1 SV=1
Length = 1054
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRNDMVKI 317
>sp|O94953|KDM4B_HUMAN Lysine-specific demethylase 4B OS=Homo sapiens GN=KDM4B PE=1 SV=4
Length = 1096
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>sp|O75164|KDM4A_HUMAN Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2
Length = 1064
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLS 201
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIE 298
>sp|Q5RD88|KDM4A_PONAB Lysine-specific demethylase 4A OS=Pongo abelii GN=KDM4A PE=2 SV=1
Length = 1064
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLS 201
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIE 298
>sp|Q91VY5|KDM4B_MOUSE Lysine-specific demethylase 4B OS=Mus musculus GN=Kdm4b PE=1 SV=1
Length = 1086
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>sp|Q9U297|KDM4_CAEEL Lysine-specific demethylase 4 OS=Caenorhabditis elegans GN=jmjd-2
PE=3 SV=2
Length = 922
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 95 DFGFEIIEFLLPISPRY--GIPDEHSTAFRSTMMSLFPHY------CRSDKTIWLSSDVA 146
D I FL +P+Y I EH+ F M F + C++ +L
Sbjct: 268 DMDLYSINFLHFGAPKYWFAISSEHADRFERFMSQQFSYQNEYAPQCKA----FLRHKTY 323
Query: 147 MIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLS 201
++ P LL + G+ + +VQ P +FI+ FP + GY +AES FA W+
Sbjct: 324 LVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRWID 378
>sp|Q8BW72|KDM4A_MOUSE Lysine-specific demethylase 4A OS=Mus musculus GN=Kdm4a PE=1 SV=3
Length = 1064
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLS 201
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIE 298
>sp|Q9UT79|MSC1_SCHPO Multicopy suppressor of chk1 protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msc1 PE=4 SV=1
Length = 1588
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 49 NGCGFPTAKNSTFAKHPWNLKVLTNNSASILRSL--NSLVDRISFGK------------I 94
N FPT++ + + PWNL + + S LR L IS G+
Sbjct: 471 NTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTPPGILTSTISLGQPLTCQGWQRDSMS 530
Query: 95 DFGFEIIEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSL 152
FG + + R Y IP+ + + L P + + + S + ++P S+
Sbjct: 531 LFGMHYHHY---GAQRIWYVIPEVDGPKYEKLLNDLSPSFIQEKPETLIKSKI-LLPISM 586
Query: 153 LTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLST--CERVFKIY 210
L G+ + VQ +F++ P+ + + + TG+ ++ESV FA W+ E F +Y
Sbjct: 587 LISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENSFNMY 646
Query: 211 K 211
K
Sbjct: 647 K 647
>sp|Q03214|ECM5_YEAST Protein ECM5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM5 PE=1 SV=1
Length = 1411
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 147 MIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
+ P+ + G+ L + QE G +I FP AFT SI +G+ ++++ FA SWL
Sbjct: 631 IFEPNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWL 684
>sp|Q9STM3|REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6
PE=1 SV=1
Length = 1360
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 111 YGIPDEHSTAFRSTMM------SLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVV 164
YG+P + + AF + L P S L ++ P + + G+ R+V
Sbjct: 267 YGVPKDAALAFEEVVRVHGYGEELNPLVTFST----LGEKTTVMSPEVFVKAGIPCCRLV 322
Query: 165 QEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
Q PG+F++ FP A+ S + G+ E+ A P WL
Sbjct: 323 QNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWL 358
>sp|Q6BDA0|ELF6_ARATH Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana
GN=ELF6 PE=1 SV=1
Length = 1340
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 22/161 (13%)
Query: 66 WNLKVLTNNSASILRSLNSLVDRIS-----FGKI---------DFGFEIIEFLLPISPR- 110
WNL+++ + S+ R + + ++ G + D + +L SP+
Sbjct: 265 WNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKT 324
Query: 111 -YGIPDEHSTAFRSTMMSLFPHYCRSDKTI----WLSSDVAMIPPSLLTEKGVSLSRVVQ 165
Y +P +++ F + Y R+ + L ++ P ++ G+ R+VQ
Sbjct: 325 WYAVPCDYALDFEEVIRK--NSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCCRLVQ 382
Query: 166 EPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERV 206
PG+F++ FP ++ + G+ E+ F P WL+ +
Sbjct: 383 NPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEA 423
>sp|Q9V6L0|KDM4B_DROME Probable lysine-specific demethylase 4B OS=Drosophila melanogaster
GN=Kdm4B PE=3 SV=3
Length = 590
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Query: 95 DFGFEIIEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSL 152
D I +L +P+ Y +P E FP + + +L + +I P +
Sbjct: 189 DMDLYSINYLHFGAPKTWYVVPPECGRKLEKVANQYFPASYK-NCNAYLRHKMTLISPQI 247
Query: 153 LTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
L + V +S++ QE G+ ++ FP + + G+ AES FA W+ +R +
Sbjct: 248 LKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQ 303
>sp|Q9V333|KDM4A_DROME Probable lysine-specific demethylase 4A OS=Drosophila melanogaster
GN=Kdm4A PE=1 SV=1
Length = 495
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 140 WLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSW 199
+L + MI P +L + + +++ QE G+ ++ FP + + G+ AES FA W
Sbjct: 244 YLRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRW 303
Query: 200 LSTCERV 206
+ +R
Sbjct: 304 IEYGKRA 310
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 42/175 (24%)
Query: 53 FPTAKNSTFAKHPWNLK-------VLTNNSASILRSLNSLVDRISFGKI----------- 94
FP K ++ PWNL L N S S L SL + R+S G +
Sbjct: 404 FPLEK---YSSEPWNLHNLPFENPCLFNYSFSDLSSLT--ITRLSIGMVFYTHGWTKSSL 458
Query: 95 --------DFGFEIIEFLLPISPRYGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDV- 145
FG + ++LP PDE S AF ++S +P Y D + S+ +
Sbjct: 459 STGLLHHHRFGDTVTWYVLP-------PDE-SDAFERYLISSYPQYTMED--LNRSNGLP 508
Query: 146 AMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ PS L E G + P +F++V P+++ G+ ESV FA +W+
Sbjct: 509 VIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWI 563
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSL--LTEKGVSLSRVVQEPG 168
Y IP+ T F + + P + L V +I P + G+ + + VQ+P
Sbjct: 448 YSIPESGCTKFNDLLNDMSPDLFIKQPDL-LHQLVTLISPYDPNFKKSGIPVYKAVQKPN 506
Query: 169 QFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++I+ FP + + TGY E+V F WL
Sbjct: 507 EYIITFPKCYHAGFNTGYNFNEAVNFTIDFWL 538
>sp|Q03833|GIS1_YEAST Transcriptional activator/repressor GIS1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GIS1 PE=1
SV=1
Length = 894
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP ++ F ++S P + + ++ + P L + + +RVVQ +F
Sbjct: 225 YSIPSANTDQFLK-ILSKEPSSNKENCPAFIRHQNIITSPDFLRKNNIKFNRVVQFQHEF 283
Query: 171 ILVFPSAFTSSIATGYLVAESVYF 194
I+ FP S GY ES+ F
Sbjct: 284 IITFPYCMYSGFNYGYNFGESIEF 307
>sp|O94691|JMJ3_SCHPO Lid2 complex component jmj3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=jmj3 PE=4 SV=1
Length = 752
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 111 YGIPDEHSTAFRSTMMSLF--PHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPG 168
Y IP HS +F+ L H+ SD +L + PPS L + G+ V +
Sbjct: 234 YVIPSAHSESFKKLAGKLAQDEHWRCSD---FLLHQNILFPPSTLVQNGIVTYSTVLKQD 290
Query: 169 QFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCE 204
+ ++ FP S+ G V F P S E
Sbjct: 291 ELLITFPGTHHSAFCLGDAVLRRFVFRSPRSASNYE 326
>sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7
OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2
Length = 293
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 18/91 (19%)
Query: 19 PAEVESEFWNHVTNRMLHICVHSASIDTG---------SNGCGFPTAKNSTFAKHPWNLK 69
PA+ E +F R+ H ID G S+GCGF + K F + +K
Sbjct: 31 PAKFEDDF------RIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIK 84
Query: 70 VLTNNSASILRS--LNSLVDRISFGKIDFGF 98
++ +SA + + +NS D + ++DF F
Sbjct: 85 LIPGDSAGTVTAFYMNSDTDSVR-DELDFEF 114
>sp|Q66T02|PKHG5_MOUSE Pleckstrin homology domain-containing family G member 5 OS=Mus
musculus GN=Plekhg5 PE=1 SV=1
Length = 1073
Score = 31.6 bits (70), Expect = 4.8, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 128 LFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYL 187
LF K + + +I P LL +K V R +++PG F+L++ + F S++
Sbjct: 677 LFTDLLLVTKAVKKAERTKVIRPPLLVDKIVC--RELRDPGSFLLIYLNEFHSAVGAYTF 734
Query: 188 VAESVYFARPSWLST 202
A S R SW+ T
Sbjct: 735 QASSQALCR-SWVDT 748
>sp|Q9ZIY0|EPMA_HAEGA Elongation factor P--(R)-beta-lysine ligase OS=Haemophilus
gallinarum GN=epmA PE=3 SV=1
Length = 322
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 100 IIEFLLPISPRYGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSS 143
++E PI +G+ D H + F + ++S F + +KT+WLS+
Sbjct: 34 LLEVETPILSEFGVTDVHLSTFSTKLISPFQ---KKEKTLWLST 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,380,966
Number of Sequences: 539616
Number of extensions: 3039973
Number of successful extensions: 6649
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6576
Number of HSP's gapped (non-prelim): 59
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)