Your job contains 1 sequence.
>psy8915
MAMYFKSDNPNDPGSNPSPAEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNST
FAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPRYGIPDEHSTA
FRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTS
SIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKVD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8915
(220 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 390 6.0e-35 2
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 303 1.6e-25 1
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 281 3.2e-23 1
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 278 6.6e-23 1
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 278 6.7e-23 1
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 278 6.7e-23 1
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 278 6.8e-23 1
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 275 1.4e-22 1
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 273 2.2e-22 1
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 273 2.2e-22 1
ZFIN|ZDB-GENE-061218-1 - symbol:jarid2a "jumonji, AT rich... 272 2.7e-22 1
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 185 5.2e-13 1
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 179 1.1e-12 1
UNIPROTKB|F5H590 - symbol:JARID2 "Protein Jumonji" specie... 178 2.2e-12 1
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 177 5.9e-12 1
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 169 4.1e-11 1
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 162 7.4e-11 1
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 147 7.5e-11 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 161 1.3e-10 1
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 161 1.4e-10 1
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 162 2.0e-10 1
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 161 2.4e-10 1
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 161 2.5e-10 1
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 158 5.3e-10 1
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 138 9.4e-10 2
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 151 1.3e-09 1
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 150 2.6e-09 1
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 150 2.7e-09 1
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 138 6.1e-09 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 138 6.1e-09 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 133 6.8e-09 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 139 9.0e-09 2
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 149 1.1e-08 1
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 138 1.2e-08 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 138 1.3e-08 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 138 1.3e-08 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 138 1.6e-08 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 138 1.6e-08 2
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 144 4.2e-08 1
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 144 4.7e-08 2
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 131 1.2e-07 2
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 115 3.6e-07 2
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 138 5.3e-07 1
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 139 1.0e-06 1
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 137 1.8e-06 1
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 137 1.9e-06 1
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 137 1.9e-06 1
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 137 1.9e-06 1
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 137 1.9e-06 1
POMBASE|SPAC343.11c - symbol:msc1 "multi-copy suppressor ... 137 2.0e-06 1
UNIPROTKB|F5GYH2 - symbol:KDM4C "Lysine-specific demethyl... 132 2.9e-06 1
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 134 2.9e-06 1
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 136 3.4e-06 1
UNIPROTKB|E7EV17 - symbol:KDM4C "Lysine-specific demethyl... 132 4.0e-06 1
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 135 4.3e-06 1
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 132 5.6e-06 1
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 132 5.6e-06 1
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 130 6.9e-06 1
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 131 6.9e-06 1
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 131 7.4e-06 1
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 131 7.4e-06 1
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 130 8.3e-06 1
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 130 1.4e-05 1
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 128 1.8e-05 1
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 128 1.8e-05 1
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 128 1.8e-05 1
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 128 1.9e-05 1
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 128 1.9e-05 1
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 128 1.9e-05 1
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 120 1.9e-05 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 120 1.9e-05 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 120 1.9e-05 2
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 129 2.0e-05 1
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 127 2.1e-05 1
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 127 2.3e-05 1
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 127 2.3e-05 1
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 127 2.3e-05 1
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 127 2.3e-05 1
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 127 2.3e-05 1
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 127 2.3e-05 1
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 125 3.4e-05 1
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 125 3.4e-05 1
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 125 6.1e-05 1
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 125 6.1e-05 1
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 121 7.8e-05 1
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 123 7.9e-05 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 114 0.00015 2
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 112 0.00016 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 114 0.00021 2
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 114 0.00021 2
CGD|CAL0001611 - symbol:orf19.2476 species:5476 "Candida ... 121 0.00023 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 114 0.00023 2
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 114 0.00023 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 114 0.00023 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 112 0.00029 2
WARNING: Descriptions of 4 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 390 (142.3 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 83/170 (48%), Positives = 112/170 (65%)
Query: 54 PTAKNSTFAKHPWNLKVLTNNSASILRSLNSL----VDRISFGKI--------D-FGFEI 100
P K S +A+HPWNLKVLTNNS S+LRSL + V + G + D G
Sbjct: 2027 PKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSW 2086
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
IE+L + + YGIPD+ S FR+ + SL P +C++ KTIWL D M+PP +LT++GV
Sbjct: 2087 IEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQN-KTIWLPCDTVMVPPHMLTDRGV 2145
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
SL R+ Q+PG+FI+VFP A+TSS+ATGY+V+ESVYFA SWL + F+
Sbjct: 2146 SLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFR 2195
Score = 215 (80.7 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 21 EVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPT----AKNSTFAKHPWNLKVLTNNSA 76
EVE+EFW HV R H+CVHS SID+ G GFP+ K S +A+HPWNLKVLTNNS
Sbjct: 1990 EVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSG 2049
Query: 77 SILRSLNSLV 86
S+LRSL ++
Sbjct: 2050 SVLRSLGPVM 2059
Score = 37 (18.1 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 31 TNRMLHICVHSASIDTGSNGCGFPTA-KNSTFA 62
TN ++ +H+AS D S + K ST A
Sbjct: 1637 TNELVKTLLHAASNDAASTTTSLKSLPKASTSA 1669
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 303 (111.7 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 72/210 (34%), Positives = 107/210 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AEVE ++W V R H+ VH +DT ++G GFP K+ F+KH WNL VL NNS SIL
Sbjct: 914 AEVEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSIL 973
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E T
Sbjct: 974 RHLGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKV 1033
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + + MI P +L +G+ + R VQ+ GQF++VFP AF S +
Sbjct: 1034 VHTLLQ--ANGTPGLEMLEKNVMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCC 1091
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
GY V+E+V+FA P W++ K K R+
Sbjct: 1092 GYSVSETVHFATPQWMNLGYEAAKDLKCRR 1121
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 281 (104.0 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 70/209 (33%), Positives = 106/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 842 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 901
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 902 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDV 961
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L +KG+ + R VQ+ GQF++ FP +F S +
Sbjct: 962 VHTLLQGNGTPGLQM-LESNV-MISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCC 1019
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1020 GYNVSETVHFATTQWTSMGFETAKEMKRR 1048
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 278 (102.9 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 70/209 (33%), Positives = 105/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 838 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 897
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 898 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDV 957
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L +GV + R VQ+ GQF++ FP +F S +
Sbjct: 958 VHTLLQANGTPGLQM-LESNV-MISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCC 1015
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1016 GYSVSETVHFATTQWTSMGFETAKEMKRR 1044
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 278 (102.9 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 69/209 (33%), Positives = 106/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 844 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 903
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 904 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDV 963
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S +
Sbjct: 964 VHTLLQANGTPGLQM-LESNV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCC 1021
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1022 GYSVSETVHFATTQWTSMGFETAKEMKRR 1050
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 278 (102.9 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 69/209 (33%), Positives = 106/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 847 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 906
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 907 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDV 966
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S +
Sbjct: 967 VHTLLQANGTPGLQM-LESNV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCC 1024
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1025 GYSVSETVHFATTQWTSMGFETAKEMKRR 1053
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 278 (102.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 69/209 (33%), Positives = 106/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 857 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 916
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 917 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDV 976
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S +
Sbjct: 977 VHTLLQANGTPGLQM-LESNV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCC 1034
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1035 GYSVSETVHFATTQWTSMGFETAKEMKRR 1063
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 275 (101.9 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 69/209 (33%), Positives = 105/209 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 856 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 915
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP E
Sbjct: 916 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEEHKLEDV 975
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L +G+ + R VQ+ GQF++ FP +F S +
Sbjct: 976 VHTLLQANGTPGLQM-LESNV-MISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCC 1033
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTR 213
GY V+E+V+FA W S K K R
Sbjct: 1034 GYSVSETVHFATTQWTSMGFETAKEMKRR 1062
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 273 (101.2 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 69/210 (32%), Positives = 107/210 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AEVE E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 820 AEVEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 879
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP
Sbjct: 880 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDV 939
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S +
Sbjct: 940 VHTLLQANGTPGLEM-LESNV-MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCC 997
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
GY V+E+V+FA W S + K K R+
Sbjct: 998 GYSVSETVHFATTQWTSMGFKTAKEMKRRR 1027
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 273 (101.2 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 69/210 (32%), Positives = 107/210 (50%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AEVE E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 833 AEVEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 892
Query: 80 RSLNSL----VDRISFGKI--------DFG-FEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + D I++L + Y IP
Sbjct: 893 RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDV 952
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + L S+V MI P +L ++G+ + R VQ+ GQF++ FP +F S +
Sbjct: 953 VHTLLQANGTPGLEM-LESNV-MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCC 1010
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
GY V+E+V+FA W S + K K R+
Sbjct: 1011 GYSVSETVHFATTQWTSMGFKTAKEMKRRR 1040
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 272 (100.8 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 67/210 (31%), Positives = 102/210 (48%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AEVE E+W V + H+ VH +DT ++G GFP K+ F+KH WNL VL+NNS SIL
Sbjct: 781 AEVEKEYWRLVDEKESHVAVHCGRVDTKTHGSGFPVGKSEPFSKHGWNLNVLSNNSGSIL 840
Query: 80 RSLNSL----VDRISFGKI---------DFGFEIIEFLLPISPR--YGIPDEHSTAFRST 124
R L ++ + ++ G + I++L + Y IP E +
Sbjct: 841 RHLGAVPGVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKV 900
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
+ +L + + MI P +L KGV + R VQ GQF++ FP F + +
Sbjct: 901 VHTLLQ--ANGTPGLEMLERNIMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCC 958
Query: 185 GYLVAESVYFARPSWLSTCERVFKIYKTRQ 214
GY V+E+++FA W+ K K R+
Sbjct: 959 GYSVSETMHFANLQWMKLGYEAAKDLKRRR 988
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 185 (70.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 52/196 (26%), Positives = 87/196 (44%)
Query: 22 VESEFWNHVTNRMLHICVHSAS-IDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASILR 80
VE+EFW V N ++ VH S +D ++G GF N+ +H WNL + S+
Sbjct: 679 VENEFWRIVENGDENVQVHYGSDLDVTTHGSGFSRTTNTQPNEH-WNLNQMPKMEESLFS 737
Query: 81 SLNSLVDRISFGKIDFGFEIIEF--------LLPIS--------PRYGIPDEHSTAFRST 124
L + ++ + G F L I+ YG+P S F
Sbjct: 738 HLTETIAGVTDPMMYVGMLFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSCSDQFEKV 797
Query: 125 MMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIAT 184
M +L P + L + MI P + + V + + +Q PG++++ FP A+ + +
Sbjct: 798 MKNLVPELFEKQPNL-LYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSH 856
Query: 185 GYLVAESVYFARPSWL 200
G+ +AE+V FA P W+
Sbjct: 857 GFTIAEAVNFAPPDWI 872
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 53/199 (26%), Positives = 90/199 (45%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPT-AKN--STFAKHPWNLKVLTNNSAS 77
VE E+W V + + V + A + T G FP+ AKN + ++K WNL V+ + + S
Sbjct: 380 VEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGS 439
Query: 78 ILRSLNSLVDRISFGKIDFGFEIIEFLLPISPRY----------------GIPDEHSTAF 121
+L +++ V I+ + G F + Y GIP + + F
Sbjct: 440 LLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQAERF 499
Query: 122 RSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSS 181
+ + P + K + L MI P L ++GV + + Q P +F++ FP +F +
Sbjct: 500 ERAALDIAPDLVKKQKDL-LYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAG 558
Query: 182 IATGYLVAESVYFARPSWL 200
I G+ + E+V FA WL
Sbjct: 559 INHGFNINEAVNFAPKDWL 577
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 178 (67.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 20 AEVESEFWNHVTNRMLHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASIL 79
AE+E E+W V + H+ VH +DT ++G GFP K+ F++H WNL VL NN+ SIL
Sbjct: 806 AEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSIL 865
Query: 80 RSLNSL 85
R L ++
Sbjct: 866 RHLGAV 871
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 177 (67.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 56/199 (28%), Positives = 88/199 (44%)
Query: 21 EVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA-KN--STFAKHPWNLKVLTNNSA 76
+VE EFW V++ + V + A I ++G GFPTA KN ++ PWNL +L +
Sbjct: 559 DVEREFWRLVSSIEETVEVEYGADIHCTTHGSGFPTAEKNPDDPYSTDPWNLNILPLHPE 618
Query: 77 SILRSLNSLVDRISFGKIDFGFEIIEFL------LPISPRY----------GIPDEHSTA 120
S+ R + S + ++ + G F S Y GIP E +
Sbjct: 619 SLFRYIKSDISGMTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEK 678
Query: 121 FRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTS 180
F + M P + + L V ++PP L + GV + + Q GQF++ FP A+ +
Sbjct: 679 FEAAMREAIPELFATQPDL-LFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHA 737
Query: 181 SIATGYLVAESVYFARPSW 199
G+ E+V FA W
Sbjct: 738 GFNHGFNFNEAVNFAPSDW 756
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YGIP E + F + M P + + L V ++PP L + GV + + Q GQF
Sbjct: 669 YGIPGEDAEKFEAAMREAIPELFATQPDL-LFQLVTLLPPEQLKKAGVRVYAIDQRAGQF 727
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSW----LSTCERVFKIYKTRQYCLKVD 220
++ FP A+ + G+ E+V FA W L+ ER+ + RQ C D
Sbjct: 728 VITFPQAYHAGFNHGFNFNEAVNFAPSDWEPFGLAGVERLQQF--RRQPCFSHD 779
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 169 (64.5 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 21 EVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNST---FAKHPWNLKVLTNNSA 76
+VE EFW V + + V + A I + ++G GFPT + + ++K PWNL L +
Sbjct: 553 DVEREFWRLVESLTETVEVEYGADIHSTTHGSGFPTVERNPLDPYSKDPWNLNNLPFHGE 612
Query: 77 SILRSLNSLVDRISFGKIDFGFEIIEFL------LPISPRY----------GIPDEHSTA 120
S+ R + S + ++ + G F S Y GIP + A
Sbjct: 613 SLFRHIKSDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEA 672
Query: 121 FRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTS 180
F M P + L V ++PP L + GV++ + Q GQF++ FP A+ +
Sbjct: 673 FEEAMRQAVPELFEGQPDL-LFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHA 731
Query: 181 SIATGYLVAESVYFARPSW 199
G+ E+V FA W
Sbjct: 732 GFNHGFNFNEAVNFAPVDW 750
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 162 (62.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 55/198 (27%), Positives = 93/198 (46%)
Query: 20 AEVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP--WNLKVLTNNSA 76
A++E E+ V + ++ I V + +DT + G GFP + S +K+ WNL
Sbjct: 247 ADIEKEYRQIVESPLIEIGVLYGNDLDTATFGSGFPLSAPSESSKYSSGWNLNSTAKLPG 306
Query: 77 SIL--RSLNSL-VDRISFGKI---DFGFEIIEFLLPI------SPR--YGIPDEHSTAFR 122
S+L S+ V R+S G F E L + +PR Y + H + F+
Sbjct: 307 SLLSLEDCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFK 366
Query: 123 STMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSI 182
+ M S F ++ + V M+ P L+ +G+ ++R VQ PGQ++++FP ++ S+
Sbjct: 367 AAMKS-FILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAF 425
Query: 183 ATGYLVAESVYFARPSWL 200
G+ E FA WL
Sbjct: 426 DCGFNCLEKANFAPLDWL 443
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 147 (56.8 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P H+T M P + L V P++L +GV + R VQ G++
Sbjct: 328 YGVPGSHATGLEKAMRKHLPDLFDEQPDL-LHELVTQFSPTILKNEGVPVYRAVQNAGEY 386
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY--KTRQYCLKVD 220
+L FP A+ S G+ AE+V A WL+ + +IY +TR+ L D
Sbjct: 387 VLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHD 438
Score = 56 (24.8 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 21 EVESEFWNHV---TN--RMLH-ICVHSASIDTG-SNGCGFPTAKNST--FAKHPWNLKVL 71
E+E E+W + TN ++L+ + + + +G S G PT +N + WNL
Sbjct: 213 EIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISSGWNL--- 269
Query: 72 TNNSASILRSLNSLVD 87
NN A + SL S D
Sbjct: 270 -NNLARLQGSLLSFED 284
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 161 (61.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNST--------FAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + + +A WNL V+
Sbjct: 411 VEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 470
Query: 73 NNSASILRSLNSLVDRISF-----GKI--DFGFEI-------IEFLLPISPR--YGIPDE 116
S+L +N+ + + G + F + I I +L P+ YG+P
Sbjct: 471 VLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL 530
Query: 117 HSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPS 176
+ M L P S + L V ++ P+ L GV + R Q G+F++ FP
Sbjct: 531 AAEHLEEVMKMLTPELFDSQPDL-LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPR 589
Query: 177 AFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 590 AYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 631
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/204 (27%), Positives = 89/204 (43%)
Query: 21 EVESEFWNHVTNRMLHICVH-SASIDTGSNGCGFPTAKNS-------TFAKHPWNLKVLT 72
++E E+W V + V+ A ++T G GFP K +++ WNL L+
Sbjct: 216 DLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLS 275
Query: 73 NNSASILR----SLNS-LVDRISFGKI--DFGFEI-------IEFLLPISPR--YGIPDE 116
S+L ++ +V + G F + + + +L P+ YGIP
Sbjct: 276 RLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGN 335
Query: 117 HSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPS 176
H+ +F + M P + L V + P +L E+GV + R VQ G+FIL FP
Sbjct: 336 HAESFENVMKKRLPDLFEEQPDL-LHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPK 394
Query: 177 AFTSSIATGYLVAESVYFARPSWL 200
A+ S G+ AE+V A WL
Sbjct: 395 AYHSGFNCGFNCAEAVNVAPVDWL 418
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNST--------FAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + + +A WNL V+
Sbjct: 414 VEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMP 473
Query: 73 NNSASILRSLNSLVDRISF-----GKI--DFGFEI-------IEFLLPISPR--YGIPDE 116
S+L +N+ + + G + F + I I +L P+ YG+P
Sbjct: 474 VLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL 533
Query: 117 HSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPS 176
+ M L P S + L V ++ P+ L GV + R Q G+F++ FP
Sbjct: 534 AAEQLEEVMKRLTPELFDSQPDL-LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPR 592
Query: 177 AFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 593 AYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 634
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 161 (61.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNST--------FAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + + +A WNL V+
Sbjct: 370 VEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 429
Query: 73 NNSASILRSLNSLVDRISF-----GKI--DFGFEI-------IEFLLPISPR--YGIPDE 116
S+L +N+ + + G + F + I I +L P+ YG+P
Sbjct: 430 VLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL 489
Query: 117 HSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPS 176
+ M L P S + L V ++ P+ L GV + R Q G+F++ FP
Sbjct: 490 AAEHLEEVMKMLTPELFDSQPDL-LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPR 548
Query: 177 AFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 549 AYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 590
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 161 (61.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNST--------FAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + + +A WNL V+
Sbjct: 411 VEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 470
Query: 73 NNSASILRSLNSLVDRISF-----GKI--DFGFEI-------IEFLLPISPR--YGIPDE 116
S+L +N+ + + G + F + I I +L P+ YG+P
Sbjct: 471 VLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL 530
Query: 117 HSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPS 176
+ M L P S + L V ++ P+ L GV + R Q G+F++ FP
Sbjct: 531 AAEHLEEVMKMLTPELFDSQPDL-LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPR 589
Query: 177 AFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 590 AYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 631
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 158 (60.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 62/223 (27%), Positives = 95/223 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP---------WNLKVL 71
VE EFW V++ + V + A I + G GFP NS + P WNL V+
Sbjct: 420 VEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPV-NNSKWDLSPEEKEYAACGWNLNVM 478
Query: 72 TNNSASILRSLNSLVDRISF-----GKI--DFGFEI-------IEFLLPISPR--YGIPD 115
S+L +N+ + + G + F + I I +L P+ YG+P
Sbjct: 479 PVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPS 538
Query: 116 EHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFP 175
+ M L P S + L V ++ P+ L GV + R Q G+F++ FP
Sbjct: 539 LAAEHLEDVMKRLTPELFDSQPDL-LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFP 597
Query: 176 SAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 598 RAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCV 640
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 138 (53.6 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 121 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 179
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 180 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 227
Score = 59 (25.8 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 7 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMP 66
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 67 VLEQSVLAHIN 77
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP + + +L VA+I P++L E G+ R+ QE G+F
Sbjct: 210 YAVPPEHGRRLERLARELFPGSSQGCQA-FLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP + + +L VA+I P++L E G+ R+ QE G+F
Sbjct: 210 YAVPPEHGRRLELLAKELFPGSSQGCQA-FLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP R +L VA+I P++L E G+ +R+ QE G+F
Sbjct: 213 YVVPPEHGQRLERLARELFPGSSRGCGA-FLRHKVALISPTVLKENGIPFNRITQEAGEF 271
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 272 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 301
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 138 (53.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 58 (25.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 138 (53.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 58 (25.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 133 (51.9 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG P + M L P S + L V ++ P+LL E GV + R Q G+F
Sbjct: 488 YGAPGYAAEQLEDVMKGLAPELFESQPDL-LHQLVTIMNPNLLMEHGVPIYRTNQCAGEF 546
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTR-QYCL 217
++ FP A+ S G+ AE+V F WL + + Y++ +YC+
Sbjct: 547 VITFPRAYHSGFNQGFNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCV 594
Score = 68 (29.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 24/68 (35%), Positives = 30/68 (44%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP---------WNLKVL 71
VE EFW V+ + V + A I + G GFP KN TF P WNL +
Sbjct: 374 VEKEFWRLVSTIEEDVTVEYGADIASKDFGSGFPV-KNGTFKVSPEEEGYLTSGWNLNNM 432
Query: 72 TNNSASIL 79
AS+L
Sbjct: 433 PVLEASVL 440
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 139 (54.0 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNILMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 59 (25.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 149 (57.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P ++TA M P + L V PS+L ++GV RVVQ G++
Sbjct: 328 YGVPGSNATALEKAMRKHLPDLFEEQPDL-LHGLVTQFSPSILKDEGVQAYRVVQNSGEY 386
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY--KTRQYCLKVD 220
+L FP A+ + G+ AE+V A WL+ + ++Y +TR+ L D
Sbjct: 387 VLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHD 438
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 138 (53.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 59 (25.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 138 (53.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 138 (53.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCV 610
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 138 (53.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 58 (25.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 138 (53.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 504 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 562
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 563 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 610
Score = 58 (25.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 390 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMP 449
Query: 73 NNSASILRSLN 83
S+L +N
Sbjct: 450 VLEQSVLAHIN 460
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 144 (55.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH LFP R + +L VA+I P++L E G+ + + QE G+F
Sbjct: 210 YVVPPEHGQHLERLARELFPDISRGCEA-FLRHKVALISPTVLKENGIPFNCMTQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AE++ FA P W+
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWI 298
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 144 (55.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 33/104 (31%), Positives = 53/104 (50%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YGIP ++AF M P + + L V M+ P++L E V + V+QEPG F
Sbjct: 100 YGIPGSAASAFEKVMRKTLPDLFDAQPDL-LFQLVTMLSPTVLQENKVPVYTVLQEPGNF 158
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL---STCERVFKIYK 211
++ FP +F + G AE+V FA WL + ++++Y+
Sbjct: 159 VITFPKSFHAGFNFGLNCAEAVNFATADWLPYGGSGAELYRLYR 202
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 12/63 (19%), Positives = 26/63 (41%)
Query: 39 VHSASIDTGSNGCGFPTAKNST-----------FAKHPWNLKVLTNNSASILRSLNSLVD 87
++ +DT G GFP + + PWNL + S+L+++ ++
Sbjct: 1 MYGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNIN 60
Query: 88 RIS 90
++
Sbjct: 61 GVT 63
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 131 (51.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 507 YGVPSHAAEQLEDVMKELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 565
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTR-QYCL 217
++ FP A+ S GY AE+V F WL + Y+ ++C+
Sbjct: 566 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCV 613
Score = 60 (26.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTA--------KNSTFAKHPWNLKVLT 72
VE EFW V++ + V + A I + G GFP + +A WNL +
Sbjct: 393 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMP 452
Query: 73 NNSASILRSLNS 84
S+L +N+
Sbjct: 453 ILEQSVLAHINA 464
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 115 (45.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/100 (28%), Positives = 44/100 (44%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+ + + M P + L V + PS L GV + R VQ G+F
Sbjct: 428 YGVGGKDAVKLEEAMRKHLPDLFEEQPDL-LHKLVTQLSPSKLKTAGVPVHRCVQHAGEF 486
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY 210
+L FP A+ + +G+ AE+V A WL + ++Y
Sbjct: 487 VLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELY 526
Score = 73 (30.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 22/69 (31%), Positives = 31/69 (44%)
Query: 21 EVESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS--------TFAKHPWNLKVL 71
+VE E+W V I V + A ++TG G GFP +S +AK WNL
Sbjct: 313 DVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNF 372
Query: 72 TNNSASILR 80
S+L+
Sbjct: 373 PRLPGSLLK 381
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 138 (53.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + M L P S + L V ++ P++L E GV + R Q G+F
Sbjct: 123 YGVPSHAAEQLEEVMRELAPELFESQPDL-LHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 181
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S GY AE+V F WL + Y+ R++C+
Sbjct: 182 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCV 229
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/187 (26%), Positives = 81/187 (43%)
Query: 48 SNGCGFPTAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI 100
+NG + + +A+ WNL V+ S+L +N+ + + G + F + I
Sbjct: 490 NNGKRQLSEEEEEYARSGWNLNVMPVLEQSLLCHINADISGMKVPWLYVGMVFSAFCWHI 549
Query: 101 -------IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPS 151
I +L P+ YG+P + M L P + L V ++ P+
Sbjct: 550 EDHWSYSINYLHWGEPKTWYGVPCSAAEKLEEVMKKLTPELFEFQPDL-LHQLVTIMNPN 608
Query: 152 LLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYK 211
+L GV + R Q G+F++ FP A+ S GY AE+V F WL T + Y+
Sbjct: 609 ILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPTGRSCIEHYR 668
Query: 212 T-RQYCL 217
R+YC+
Sbjct: 669 QLRRYCV 675
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 422 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 481
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 482 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 540
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 541 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 600
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 422 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 481
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 482 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 540
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 541 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 600
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 422 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 481
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 482 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 540
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 541 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 600
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 462 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 521
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 522 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 580
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 581 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 640
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 55 TAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRISF-----GKI--DFGFEI------- 100
T + +A WNL V+ S+L +N+ + + G + F + I
Sbjct: 463 TPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS 522
Query: 101 IEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGV 158
I +L P+ YG+P + M L P S + L V ++ P+ L GV
Sbjct: 523 INYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDL-LHQLVTLMNPNTLMSHGV 581
Query: 159 SLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
+ R Q G+F++ FP A+ S GY AE+V F WL + + Y+ R+YC+
Sbjct: 582 PVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCV 641
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 49 NGCGFPTAKNSTFAKHPWNLKVLTNNSASILRSL--NSLVDRISFGK--IDFGFEIIEFL 104
N FPT++ + + PWNL + + S LR L IS G+ G++
Sbjct: 471 NTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTPPGILTSTISLGQPLTCQGWQRDSMS 530
Query: 105 L--PISPRYG-------IPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
L YG IP+ + + L P + + + S + ++P S+L
Sbjct: 531 LFGMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQEKPETLIKSKI-LLPISMLIS 589
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLST--CERVFKIYK 211
G+ + VQ +F++ P+ + + + TG+ ++ESV FA W+ E F +YK
Sbjct: 590 NGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENSFNMYK 647
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 132 (51.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 30 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 88
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R+ +K+
Sbjct: 89 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRKDMVKI 136
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP +S + +L + +I PS+L + G+ +V QE G+F
Sbjct: 209 YSIPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPSILKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP ++ + G+ AES FA W+
Sbjct: 268 MITFPYSYHAGFNHGFNCAESTNFATLRWI 297
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I PS+L + G+ +V QE GQF
Sbjct: 212 YVVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPSILRKYGIPFEKVTQEAGQF 270
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
I+ FP + + G+ AES FA W+
Sbjct: 271 IVTFPYGYHAGFNHGFNCAESTNFATQRWI 300
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 30 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 88
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R+ +K+
Sbjct: 89 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRKDMVKI 136
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 52/200 (26%), Positives = 81/200 (40%)
Query: 35 LHICVHSASIDTGSNGCGFPTAKNSTFAKHPWNLKVLTNNSASILRSLNSLVDRIS---- 90
LH H + T S+ P + +A+ WNL L SIL +N+ + ++
Sbjct: 568 LHTMDHGSGFPTKSSLYLLPG--DQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWM 625
Query: 91 -----FGKI-----DFGFEIIEFLLPISPR--YGIPDEHSTAFRSTMMSLFPHYCRSDKT 138
F D I +L P+ YG+P + F TM P S
Sbjct: 626 YVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPD 685
Query: 139 IWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPS 198
+ L V ++ P++L V + R Q G+F++ FP A+ + GY AE+V FA
Sbjct: 686 L-LHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPAD 744
Query: 199 WLSTCERVFKIYKT-RQYCL 217
WL Y R++C+
Sbjct: 745 WLKMGRECVNHYSMLRRFCV 764
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R+ +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRKDMVKI 317
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R+ +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRKDMVKI 317
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 130 (50.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 32/115 (27%), Positives = 51/115 (44%)
Query: 96 FGFEIIEFLLPISPRYGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTE 155
+ I F P Y IP E F M FP ++ +L + + P LL E
Sbjct: 242 YSINYIHFGAP-KQWYSIPQEDRFKFYKFMQEQFPEEAKNCPE-FLRHKMFLASPKLLQE 299
Query: 156 KGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIY 210
G+ + +V G+F++ +P + + GY +AESV FA WL ++ K +
Sbjct: 300 NGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCH 354
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFP---HYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEP 167
Y IP EH FP H C + +L + +I PS+L + G+ +V QE
Sbjct: 155 YAIPPEHGKRLERLAQGFFPSSSHGCNA----FLRHKMTLISPSILKKYGIPFDKVTQEA 210
Query: 168 GQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
G+F++ FP + + G+ AES FA W+
Sbjct: 211 GEFMITFPYGYHAGFNHGFNCAESTNFATIRWI 243
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRNDMVKI 317
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKTRQYCLKV 219
++ FP + + G+ AES FA W+ +V K+ R +K+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWIDY-GKVAKLCTCRNDMVKI 317
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 34/111 (30%), Positives = 50/111 (45%)
Query: 95 DFGFEIIEFLLPISPRY--GIPDEHSTAFRSTMMSLFPH---YCRSDKTIWLSSDVAMIP 149
D I FL +P+Y I EH+ F M F + Y K +L ++
Sbjct: 268 DMDLYSINFLHFGAPKYWFAISSEHADRFERFMSQQFSYQNEYAPQCKA-FLRHKTYLVT 326
Query: 150 PSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
P LL + G+ + +VQ P +FI+ FP + GY +AES FA W+
Sbjct: 327 PELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRWI 377
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 96 FGFEIIEFLLPISPRYGIPDEHSTAFRSTMMSLFPHYCRS-DKTIWLSSDVAMIPPSLL- 153
+ I F P Y I E + F M S++P ++ D+ +L ++ PSLL
Sbjct: 396 YSINYIHFGAP-KQWYSISQEDAPRFEQAMKSIWPSDAKTCDQ--FLRHKTYLVSPSLLK 452
Query: 154 TEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ G++++++V G+F++ +P + S GY AESV FA WL
Sbjct: 453 SQYGITVNKMVHYEGEFVITYPYGYHSGYNLGYNCAESVNFATEKWL 499
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ R+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAKGFFPGSSQGCDA-FLRHKMTLISPSILKKYGIPFDRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP + +L + +I P +L + G+ SR+ QE G+F
Sbjct: 210 YAIPPEHGKRLERLAIGFFPGSSQGCDA-FLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWI 298
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/108 (28%), Positives = 48/108 (44%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG P + M L P S + L V ++ P+ L GV + R Q G+F
Sbjct: 483 YGAPGYAAEQLEDVMKKLAPELFESQPDL-LHQLVTIMNPNTLMAHGVPVYRTNQCAGEF 541
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 542 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCV 589
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP 65
VE EFW V+ + V + A I + G GFP ++ F P
Sbjct: 369 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPV-RDGKFKVRP 412
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/108 (28%), Positives = 48/108 (44%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG P + M L P S + L V ++ P+ L GV + R Q G+F
Sbjct: 494 YGAPGYAAEQLEDVMKKLAPELFESQPDL-LHQLVTIMNPNTLMAHGVPVYRTNQCAGEF 552
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 553 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCV 600
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP 65
VE EFW V+ + V + A I + G GFP ++ F P
Sbjct: 380 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPV-RDGKFKVRP 423
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/108 (28%), Positives = 48/108 (44%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG P + M L P S + L V ++ P+ L GV + R Q G+F
Sbjct: 495 YGAPGYAAEQLEDVMKKLAPELFESQPDL-LHQLVTIMNPNTLMAHGVPVYRTNQCAGEF 553
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 554 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCV 601
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHP 65
VE EFW V+ + V + A I + G GFP ++ F P
Sbjct: 381 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPV-RDGKFKVRP 424
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH + FP+ +S + +L + +I PS+L + + ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAIGFFPNSFKSCEA-FLRHKMTLISPSVLKKYSIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFASIRWI 299
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 118 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 176
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 177 MITFPYGYHAGFNHGFNCAESTNFATRRWI 206
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 211 YAIPPEHGKRLERLAQGFFPSSSQGCDA-FLRHKMTLISPSVLKKYGIPFDKITQEAGEF 269
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFATVRWI 299
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWI 297
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWI 297
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWI 297
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWI 297
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP +S + +L + +I P +L + G+ +V QE G+F
Sbjct: 209 YSVPPEHGKRLERLAKGFFPGSAQSCEA-FLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWI 297
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP ++ + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 206 YTVPPEHGKRLERLAKGFFPGSSQNCEA-FLRHKMTLISPSILKKYGIPFEKITQEAGEF 264
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 265 MVTFPYGYHAGFNHGFNCAESTNFATRRWI 294
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y +P EH FP ++ + +L + +I PS+L + G+ ++ QE G+F
Sbjct: 206 YTVPPEHGKRLERLAKGFFPGSSQNCEA-FLRHKMTLISPSILKKYGIPFEKITQEAGEF 264
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 265 MVTFPYGYHAGFNHGFNCAESTNFATRRWI 294
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 52/222 (23%), Positives = 82/222 (36%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS----------TFAKHPWNLKV 70
VE FW +V + + V + A + T G GFP ++ +A H WNL
Sbjct: 419 VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNN 478
Query: 71 LTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPR----------------YGIP 114
+ S+L N+ + + + G F YG+
Sbjct: 479 MPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVG 538
Query: 115 DEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVF 174
E + F + + P + ++ A P LL GV + V Q G+F++ F
Sbjct: 539 GEDAEKFEDALKKIAPGLTGRQRDLFHHMTTAA-NPHLLRSLGVPIHSVHQNAGEFVITF 597
Query: 175 PSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQY 215
P A+ + G AE+V FA WLS + Y R+Y
Sbjct: 598 PRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRY 639
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 52/222 (23%), Positives = 82/222 (36%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNS----------TFAKHPWNLKV 70
VE FW +V + + V + A + T G GFP ++ +A H WNL
Sbjct: 419 VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNN 478
Query: 71 LTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPR----------------YGIP 114
+ S+L N+ + + + G F YG+
Sbjct: 479 MPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVG 538
Query: 115 DEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQFILVF 174
E + F + + P + ++ A P LL GV + V Q G+F++ F
Sbjct: 539 GEDAEKFEDALKKIAPGLTGRQRDLFHHMTTAA-NPHLLRSLGVPIHSVHQNAGEFVITF 597
Query: 175 PSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQY 215
P A+ + G AE+V FA WLS + Y R+Y
Sbjct: 598 PRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRY 639
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 121 (47.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 38/167 (22%), Positives = 65/167 (38%)
Query: 61 FAKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPRY--------- 111
+ HPWNL L ++ S+L +N+ + ++ I G + F + Y
Sbjct: 324 YINHPWNLNKLPFSNGSLLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHF 383
Query: 112 -------GIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVV 164
GIP + F M P + + L V ++ PS L E G+
Sbjct: 384 GATKKWYGIPSSFADKFEKLMRDSAPDLFKRQPDL-LHQLVTLMSPSKLVEHGIPCVYAD 442
Query: 165 QEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYK 211
Q +F++ +P + + G+ E+V FA WL E+ Y+
Sbjct: 443 QNSNEFVITYPLVYHAGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYR 489
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 123 (48.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP EH FP + +L + +I PS+L + + R+ QE G+F
Sbjct: 290 YAIPPEHGKRLERLAQGFFPGSSQGCDA-FLRHKMTLISPSILKKYSIPFDRITQEEGEF 348
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWL 200
++ FP + + G+ AES FA W+
Sbjct: 349 MITFPYGYHAGFNHGFNCAESTNFATLRWI 378
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 362 YGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 420
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 421 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 468
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 248 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 281
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 112 (44.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/108 (26%), Positives = 48/108 (44%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG P + + M L P S + L V ++ P+ L GV + R Q G+F
Sbjct: 525 YGAPGFAAEQLEAVMKKLAPELFDSQPDL-LHQLVTIMNPNTLMAHGVPIYRTNQCAGEF 583
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP ++ S G+ AE+V F W+ + Y+ +YC+
Sbjct: 584 VITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCV 631
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFPTAKNSTFAKHPWNLKVL 71
VE EFW V + V + A I + G GFP K F P + K L
Sbjct: 411 VEKEFWRLVGTIQEDVTVEYGADIASKEFGSGFPI-KGGRFKIAPHDEKYL 460
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 114 (45.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 452 YGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 510
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 511 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 558
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 338 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 371
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 114 (45.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 460 YGVPGYAAEQLETVMKKLAPELFISQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 518
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 519 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 566
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 346 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 379
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 121 (47.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 147 MIPPSLLTEKGVSLSRVVQEPGQFILVFPSAFTSSIATGYLVAESVYFARPSWLS 201
MI P LL G+ + +QEPG+ I+ FP F+S+I+ G+ ++E V A SWL+
Sbjct: 752 MITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWLN 806
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 62 AKHPWNLKVLTNNSASILRSLNSLVDRISFGKIDFGFEIIEFLLPISPRYGIPDEHST 119
A HPWNL +N + +L +D+ D I + S ++H T
Sbjct: 590 ALHPWNL----HNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWTCEDHFT 643
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 114 (45.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 520 YGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 578
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 579 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 626
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 406 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 439
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 114 (45.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 520 YGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 578
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 579 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 626
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 406 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 439
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 114 (45.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 522 YGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE-VPVYRTNQCAGEF 580
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 581 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 628
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 408 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 441
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 112 (44.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
YG+P + + M L P S + M P +L+T + V + R Q G+F
Sbjct: 519 YGVPGFAAEQLEAVMKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQ-VPVYRTNQCAGEF 577
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFKIYKT-RQYCL 217
++ FP A+ S G+ AE+V F WL + + Y+ +YC+
Sbjct: 578 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCV 625
Score = 49 (22.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 22 VESEFWNHVTNRMLHICV-HSASIDTGSNGCGFP 54
VE EFW V+ + V + A I + G GFP
Sbjct: 405 VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP 438
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP F + M+ LF H + +L M+ P+ L + G+ ++ + G+F
Sbjct: 243 YSIPQSQHEEFYALMVDLF-HDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
I+ +P + + Y +AESV FA W +R K
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP F + M+ LF H + +L M+ P+ L + G+ ++ + G+F
Sbjct: 243 YSIPQSQHEEFYALMVDLF-HDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
I+ +P + + Y +AESV FA W +R K
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP F + M+ LF H + +L M+ P+ L + G+ ++ + G+F
Sbjct: 243 YSIPQSQHEEFYALMVDLF-HDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
I+ +P + + Y +AESV FA W +R K
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 111 YGIPDEHSTAFRSTMMSLFPHYCRSDKTIWLSSDVAMIPPSLLTEKGVSLSRVVQEPGQF 170
Y IP F + M+ LF H + +L M+ P+ L + G+ ++ + G+F
Sbjct: 243 YSIPQSQHEEFYALMVDLF-HDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 171 ILVFPSAFTSSIATGYLVAESVYFARPSWLSTCERVFK 208
I+ +P + + Y +AESV FA W +R K
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFGKRTKK 339
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 220 207 0.00099 111 3 11 22 0.44 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 104
No. of states in DFA: 609 (65 KB)
Total size of DFA: 182 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 18.68u 0.07s 18.75t Elapsed: 00:00:21
Total cpu time: 18.70u 0.07s 18.77t Elapsed: 00:00:45
Start: Thu Aug 15 13:13:18 2013 End: Thu Aug 15 13:14:03 2013
WARNINGS ISSUED: 1