Your job contains 1 sequence.
>psy8916
MSTGQKETLQQPNLGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQN
LHPNPCRFAPSGYFGSKFVTICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVT
GDKDNQVHMEGYQVSNQCMALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYKILRIQS
PVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLS
NGDFVYMMNLSSPNDEKPSTSSNHLNIYETKKKASTTPSTPTEFKSKLSNAFSSSNNIVE
DEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLR
KQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVEFE
NRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLP
DPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8916
(520 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039348 - symbol:Npl4 "Npl4 ortholog" species:7227... 930 2.1e-93 1
UNIPROTKB|Q7SZT9 - symbol:nploc4 "Npl4 protein" species:8... 799 2.7e-92 2
MGI|MGI:2679787 - symbol:Nploc4 "nuclear protein localiza... 793 1.1e-91 2
UNIPROTKB|F1PNX1 - symbol:NPLOC4 "Uncharacterized protein... 792 1.1e-91 2
RGD|620794 - symbol:Nploc4 "nuclear protein localization ... 791 1.9e-91 2
UNIPROTKB|Q9ES54 - symbol:Nploc4 "Nuclear protein localiz... 791 1.9e-91 2
UNIPROTKB|F1N7U2 - symbol:NPLOC4 "Uncharacterized protein... 789 1.9e-91 2
UNIPROTKB|Q8TAT6 - symbol:NPLOC4 "Nuclear protein localiz... 792 4.9e-91 2
ZFIN|ZDB-GENE-030131-5658 - symbol:nploc4 "nuclear protei... 900 3.1e-90 1
UNIPROTKB|J9NXM8 - symbol:NPLOC4 "Uncharacterized protein... 792 8.7e-79 1
UNIPROTKB|F1LQX9 - symbol:Nploc4 "Nuclear protein localiz... 791 1.1e-78 1
UNIPROTKB|I3L829 - symbol:NPLOC4 "Uncharacterized protein... 789 1.8e-78 1
WB|WBGene00019120 - symbol:npl-4.1 species:6239 "Caenorha... 588 3.6e-57 1
WB|WBGene00019121 - symbol:npl-4.2 species:6239 "Caenorha... 588 3.6e-57 1
POMBASE|SPBC1711.10c - symbol:npl4 "Cdc48-Npl4-Ufd1 compl... 586 5.9e-57 1
ASPGD|ASPL0000052804 - symbol:AN0295 species:162425 "Emer... 530 5.1e-51 1
SGD|S000000374 - symbol:NPL4 "Substrate-recruiting cofact... 523 2.8e-50 1
CGD|CAL0001521 - symbol:NPL4 species:5476 "Candida albica... 512 4.1e-49 1
UNIPROTKB|Q5AA50 - symbol:NPL4 "Nuclear protein localizat... 512 4.1e-49 1
UNIPROTKB|A4RN19 - symbol:NPL4 "Nuclear protein localizat... 487 4.2e-49 2
DICTYBASE|DDB_G0290227 - symbol:npl4 "nuclear protein loc... 159 6.2e-14 2
TAIR|locus:2099142 - symbol:NPL41 "AT3G63000" species:370... 115 0.00091 2
>FB|FBgn0039348 [details] [associations]
symbol:Npl4 "Npl4 ortholog" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 UniPathway:UPA00144 EMBL:AE014297
GO:GO:0043161 GO:GO:0022008 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 GO:GO:0006511 KO:K14015 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 eggNOG:COG5100
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 EMBL:AY058286 RefSeq:NP_001163731.1
RefSeq:NP_651407.3 RefSeq:NP_733110.2 UniGene:Dm.4324 HSSP:Q9ES54
ProteinModelPortal:Q9VBP9 SMR:Q9VBP9 IntAct:Q9VBP9
MINT:MINT-1565061 STRING:Q9VBP9 PaxDb:Q9VBP9
EnsemblMetazoa:FBtr0084893 GeneID:43091 KEGG:dme:Dmel_CG4673
UCSC:CG4673-RA FlyBase:FBgn0039348 GeneTree:ENSGT00390000018731
InParanoid:Q8IMS6 OMA:NEVMPLR OrthoDB:EOG4BG7B0 PhylomeDB:Q9VBP9
GenomeRNAi:43091 NextBio:832165 Bgee:Q9VBP9 Uniprot:Q9VBP9
Length = 652
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 175/339 (51%), Positives = 235/339 (69%)
Query: 185 VKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDF 244
+KRI I+ K L++ + +++ F LFK+RN E+ +S Q + + L +GD
Sbjct: 44 IKRIEISPKSNLKHLYDSVQNALKVD--GFGLFKERNFLTELQASGSQLVGT-SLRHGDM 100
Query: 245 VYMMNLSSPNDEKPSTSSNHLNIYEXXXXXXXXXXXXXEFK-SKLSNAFSS--SNNIVED 301
VY+ ++ + + ST+ + + FK S +SN S+ S N++ED
Sbjct: 101 VYLKQMAGTSSRRTSTT-----VLDSQA-----------FKTSTISNPNSARPSFNVIED 144
Query: 302 EVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRK 361
+VD+ L K DG +KR+RD K C H AN C+HCS LEPYDE YL+E N+KH+SFH+Y+RK
Sbjct: 145 DVDQALSKADGTIKRERDSKLCHHNANGRCVHCSALEPYDESYLKEHNIKHLSFHSYIRK 204
Query: 362 QCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVEFEN 421
Q +G+D+GK+ V +D++CRIK GCREHPPWP+GICSKCQP+AITLNRQ YRHVDNV FEN
Sbjct: 205 QTSGMDQGKYFVFDDINCRIKPGCREHPPWPKGICSKCQPSAITLNRQTYRHVDNVMFEN 264
Query: 422 RTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLPD 481
+VERFL YWR TGHQR+G LYG Y+ H DVPLGI+A VAAIYEPPQES+RD I + PD
Sbjct: 265 TKIVERFLNYWRTTGHQRMGYLYGTYEQHTDVPLGIRAKVAAIYEPPQESTRDSINIQPD 324
Query: 482 PKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
A+ V+ +AS+LGL ++GWIFTDL+ +D +GT Q R
Sbjct: 325 EFADDVDAVASALGLKKIGWIFTDLITDDASIGTVKQIR 363
Score = 410 (149.4 bits), Expect = 7.6e-38, P = 7.6e-38
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 83 VTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALV 142
+T ECI AG LQN HPNPC++A +G FGSKFVTICVTGDK QVHMEGY VS QCMALV
Sbjct: 370 ITAQECITAGELQNRHPNPCKYASNGVFGSKFVTICVTGDKTKQVHMEGYAVSAQCMALV 429
Query: 143 RDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
RD CLIPTKDAPELGY++ES+DKQYVPDVFYK
Sbjct: 430 RDNCLIPTKDAPELGYVRESTDKQYVPDVFYK 461
Score = 272 (100.8 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 46/71 (64%), Positives = 58/71 (81%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL ++GWIFTDL+ +D +GTV+ R I+SHF++A ECI AG LQN HPNPC++A +G
Sbjct: 337 LGLKKIGWIFTDLITDDASIGTVKQIRGIESHFITAQECITAGELQNRHPNPCKYASNGV 396
Query: 74 FGSKFVTICVT 84
FGSKFVTICVT
Sbjct: 397 FGSKFVTICVT 407
>UNIPROTKB|Q7SZT9 [details] [associations]
symbol:nploc4 "Npl4 protein" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001876
PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547 GO:GO:0008270
GO:GO:0005622 KO:K14015 InterPro:IPR007717 InterPro:IPR024682
Pfam:PF05021 Pfam:PF11543 InterPro:IPR007716 InterPro:IPR016563
Pfam:PF05020 PIRSF:PIRSF010052 CTD:55666 HOVERGEN:HBG052659
EMBL:BC056013 RefSeq:NP_001080427.1 UniGene:Xl.3946
ProteinModelPortal:Q7SZT9 SMR:Q7SZT9 GeneID:380119 KEGG:xla:380119
Xenbase:XB-GENE-958211 Uniprot:Q7SZT9
Length = 610
Score = 799 (286.3 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 140/229 (61%), Positives = 180/229 (78%)
Query: 294 SSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQN--VK 351
SS +V+DE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL + VK
Sbjct: 103 SSPQVVDDEIDQYLSKQDGKIYRNRDPQLCRHGPMGKCVHCVPLEPFDEDYLNHLDPPVK 162
Query: 352 HMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVY 411
HMSFHAY+RK G D+GKFV LE++SC+IK GC HPPWP GIC+KCQP+AITLNRQ Y
Sbjct: 163 HMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHPPWPEGICTKCQPSAITLNRQKY 222
Query: 412 RHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQES 471
RHVDN+ FEN T+ +RFL++WR TG+QR+G LYG+Y H D+PLG++A VAAIYEPPQ
Sbjct: 223 RHVDNIMFENHTIADRFLDFWRKTGNQRIGYLYGRYTEHKDIPLGLRAEVAAIYEPPQIG 282
Query: 472 SRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
+++ ++LL DPKA+VV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 283 TQNSLQLLDDPKAKVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 331
Score = 362 (132.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 65/95 (68%), Positives = 75/95 (78%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG+ QN +PN CR +P +FGSKFVT+ TG DNQVH EGYQVSNQCM
Sbjct: 335 TYFLSAEECITAGYFQNKYPNLCRLSPDAHFGSKFVTVVATGGPDNQVHFEGYQVSNQCM 394
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P +DAPELGY KESS +QYVPDVFYK
Sbjct: 395 ALVRDECLLPCRDAPELGYAKESSSEQYVPDVFYK 429
Score = 249 (92.7 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 45/71 (63%), Positives = 57/71 (80%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLSA ECI AG+ QN +PN CR +P +
Sbjct: 305 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSAEECITAGYFQNKYPNLCRLSPDAH 364
Query: 74 FGSKFVTICVT 84
FGSKFVT+ T
Sbjct: 365 FGSKFVTVVAT 375
Score = 140 (54.3 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 31/86 (36%), Positives = 53/86 (61%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+RIQSP GI KRIN ++ +T +K+ KEF F+++ RN+T EI +S+++++
Sbjct: 6 IIRIQSPDGI-KRINASKRETAATFLKKVAKEFGFRNNGFSVYVNRNRTGEISASQNKSL 64
Query: 235 ASVGLSNGDFVYMMNLSSPNDEKPST 260
+ + +GD +++ SS PST
Sbjct: 65 HFLKIKHGDMLFLFPSSSAG---PST 87
>MGI|MGI:2679787 [details] [associations]
symbol:Nploc4 "nuclear protein localization 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006944 "cellular membrane fusion" evidence=ISO] [GO:0007030
"Golgi organization" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=ISO]
[GO:0043130 "ubiquitin binding" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 UniPathway:UPA00144 MGI:MGI:2679787
GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0006944 GO:GO:0030433 GO:GO:0042175
GO:GO:0007030 EMBL:AL669855 KO:K14015 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 eggNOG:COG5100
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 GeneTree:ENSGT00390000018731 OMA:NEVMPLR
HOGENOM:HOG000008139 CTD:55666 HOVERGEN:HBG052659 OrthoDB:EOG4DNF3Z
ChiTaRS:NPLOC4 EMBL:AK129375 EMBL:BC065156 IPI:IPI00118766
IPI:IPI00465884 RefSeq:NP_001181952.1 RefSeq:NP_955763.1
UniGene:Mm.309520 PDB:2PJH PDBsum:2PJH ProteinModelPortal:P60670
SMR:P60670 STRING:P60670 PaxDb:P60670 PRIDE:P60670
Ensembl:ENSMUST00000044271 Ensembl:ENSMUST00000103017 GeneID:217365
KEGG:mmu:217365 UCSC:uc007msp.2 UCSC:uc007msq.2 InParanoid:B1ATY4
EvolutionaryTrace:P60670 NextBio:375815 Bgee:P60670
Genevestigator:P60670 GermOnline:ENSMUSG00000039703 Uniprot:P60670
Length = 608
Score = 793 (284.2 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 143/232 (61%), Positives = 179/232 (77%)
Query: 291 AFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQ 348
AF + N +VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E
Sbjct: 99 AFGAPN-VVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEP 157
Query: 349 NVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNR 408
VKHMSFHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNR
Sbjct: 158 PVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNR 217
Query: 409 QVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPP 468
Q YRHVDN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPP
Sbjct: 218 QKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPP 277
Query: 469 QESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
Q +++ ++LL DPKAEVV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 278 QIGTQNSLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 368 (134.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 251 (93.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 140 (54.3 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 31/96 (32%), Positives = 56/96 (58%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S +++
Sbjct: 6 IIRVQSPDG-VKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSSKSL 64
Query: 235 ASVGLSNGD--FVYMMNLSSPNDEKPSTSSNHLNIY 268
+ + +GD F++ +L+ P+ E +++S L +
Sbjct: 65 HLLKIKHGDLLFLFPSSLAGPSSEMETSTSVGLKAF 100
>UNIPROTKB|F1PNX1 [details] [associations]
symbol:NPLOC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001876
PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547 GO:GO:0008270
GO:GO:0005622 InterPro:IPR007717 InterPro:IPR024682 Pfam:PF05021
Pfam:PF11543 InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 GeneTree:ENSGT00390000018731 OMA:NEVMPLR
EMBL:AAEX03006170 Ensembl:ENSCAFT00000009294 Uniprot:F1PNX1
Length = 608
Score = 792 (283.9 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 141/226 (62%), Positives = 176/226 (77%)
Query: 297 NIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQNVKHMS 354
N+VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E VKHMS
Sbjct: 104 NVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMS 163
Query: 355 FHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHV 414
FHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNRQ YRHV
Sbjct: 164 FHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHV 223
Query: 415 DNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRD 474
DN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPPQ +++
Sbjct: 224 DNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQN 283
Query: 475 KIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
++LL DPKAEVV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 284 SLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 368 (134.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 251 (93.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 141 (54.7 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 31/93 (33%), Positives = 56/93 (60%)
Query: 171 VFYKILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSR 230
VF I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S
Sbjct: 2 VFKIIIRVQSPDG-VKRITATKRETAAAFLKKVAKEFGFQNNGFSVYINRNKTGEITASS 60
Query: 231 DQTIASVGLSNGD--FVYMMNLSSPNDEKPSTS 261
++++ + + +GD F++ +L+ P+ E +++
Sbjct: 61 TKSLSLLKIQHGDLLFLFPSSLAGPSSEMETSA 93
>RGD|620794 [details] [associations]
symbol:Nploc4 "nuclear protein localization 4 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006944 "cellular membrane fusion" evidence=IDA]
[GO:0007030 "Golgi organization" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 UniPathway:UPA00144 RGD:620794
GO:GO:0005829 GO:GO:0005634 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 GO:GO:0006944 GO:GO:0007030 GO:GO:0043130
GO:GO:0031625 GO:GO:0034098 KO:K14015 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 eggNOG:COG5100
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 HOGENOM:HOG000008139 CTD:55666 HOVERGEN:HBG052659
OrthoDB:EOG4DNF3Z EMBL:AF234600 EMBL:BC101887 IPI:IPI00191492
RefSeq:NP_542144.1 UniGene:Rn.217306 PDB:1NJ3 PDB:1Q5W PDBsum:1NJ3
PDBsum:1Q5W ProteinModelPortal:Q9ES54 SMR:Q9ES54 IntAct:Q9ES54
MINT:MINT-1610466 STRING:Q9ES54 PhosphoSite:Q9ES54 PRIDE:Q9ES54
GeneID:140639 KEGG:rno:140639 EvolutionaryTrace:Q9ES54
NextBio:620604 ArrayExpress:Q9ES54 Genevestigator:Q9ES54
GermOnline:ENSRNOG00000036698 Uniprot:Q9ES54
Length = 608
Score = 791 (283.5 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 143/232 (61%), Positives = 179/232 (77%)
Query: 291 AFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQ 348
AF + + +VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E
Sbjct: 99 AFGAPH-VVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEP 157
Query: 349 NVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNR 408
VKHMSFHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNR
Sbjct: 158 PVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNR 217
Query: 409 QVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPP 468
Q YRHVDN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPP
Sbjct: 218 QKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPP 277
Query: 469 QESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
Q +++ ++LL DPKAEVV+EIAS LGL +VGWIFTDLV+ED + GT SR
Sbjct: 278 QIGTQNSLELLEDPKAEVVDEIASKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 368 (134.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 251 (93.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 140 (54.3 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 31/96 (32%), Positives = 56/96 (58%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S +++
Sbjct: 6 IIRVQSPDG-VKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSSKSL 64
Query: 235 ASVGLSNGD--FVYMMNLSSPNDEKPSTSSNHLNIY 268
+ + +GD F++ +L+ P+ E +++S L +
Sbjct: 65 HLLKIKHGDLLFLFPSSLAGPSSEMETSTSVGLKAF 100
>UNIPROTKB|Q9ES54 [details] [associations]
symbol:Nploc4 "Nuclear protein localization protein 4
homolog" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 UniPathway:UPA00144 RGD:620794
GO:GO:0005829 GO:GO:0005634 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 GO:GO:0006944 GO:GO:0007030 GO:GO:0043130
GO:GO:0031625 GO:GO:0034098 KO:K14015 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 eggNOG:COG5100
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 HOGENOM:HOG000008139 CTD:55666 HOVERGEN:HBG052659
OrthoDB:EOG4DNF3Z EMBL:AF234600 EMBL:BC101887 IPI:IPI00191492
RefSeq:NP_542144.1 UniGene:Rn.217306 PDB:1NJ3 PDB:1Q5W PDBsum:1NJ3
PDBsum:1Q5W ProteinModelPortal:Q9ES54 SMR:Q9ES54 IntAct:Q9ES54
MINT:MINT-1610466 STRING:Q9ES54 PhosphoSite:Q9ES54 PRIDE:Q9ES54
GeneID:140639 KEGG:rno:140639 EvolutionaryTrace:Q9ES54
NextBio:620604 ArrayExpress:Q9ES54 Genevestigator:Q9ES54
GermOnline:ENSRNOG00000036698 Uniprot:Q9ES54
Length = 608
Score = 791 (283.5 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 143/232 (61%), Positives = 179/232 (77%)
Query: 291 AFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQ 348
AF + + +VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E
Sbjct: 99 AFGAPH-VVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEP 157
Query: 349 NVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNR 408
VKHMSFHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNR
Sbjct: 158 PVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNR 217
Query: 409 QVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPP 468
Q YRHVDN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPP
Sbjct: 218 QKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPP 277
Query: 469 QESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
Q +++ ++LL DPKAEVV+EIAS LGL +VGWIFTDLV+ED + GT SR
Sbjct: 278 QIGTQNSLELLEDPKAEVVDEIASKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 368 (134.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 251 (93.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 140 (54.3 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 31/96 (32%), Positives = 56/96 (58%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S +++
Sbjct: 6 IIRVQSPDG-VKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSSKSL 64
Query: 235 ASVGLSNGD--FVYMMNLSSPNDEKPSTSSNHLNIY 268
+ + +GD F++ +L+ P+ E +++S L +
Sbjct: 65 HLLKIKHGDLLFLFPSSLAGPSSEMETSTSVGLKAF 100
>UNIPROTKB|F1N7U2 [details] [associations]
symbol:NPLOC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 GO:GO:0008270 GO:GO:0005622 KO:K14015
InterPro:IPR007717 InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 GeneTree:ENSGT00390000018731 OMA:NEVMPLR
CTD:55666 EMBL:DAAA02049421 IPI:IPI00688630 RefSeq:NP_001179118.1
UniGene:Bt.103019 Ensembl:ENSBTAT00000042613 GeneID:508519
KEGG:bta:508519 NextBio:20868554 Uniprot:F1N7U2
Length = 608
Score = 789 (282.8 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 140/226 (61%), Positives = 176/226 (77%)
Query: 297 NIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQNVKHMS 354
N+VEDE+D+ L + DG++ R RD + CRHG C+HC PLEP+DE+YL E VKHMS
Sbjct: 104 NVVEDEIDQYLSRQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMS 163
Query: 355 FHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHV 414
FHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNRQ YRHV
Sbjct: 164 FHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHV 223
Query: 415 DNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRD 474
DN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPPQ +++
Sbjct: 224 DNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQN 283
Query: 475 KIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
++LL DPKAEVV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 284 SLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 368 (134.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 251 (93.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 142 (55.0 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 31/93 (33%), Positives = 55/93 (59%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S ++++
Sbjct: 6 IIRVQSPDG-VKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSL 64
Query: 235 ASVGLSNGD--FVYMMNLSSPNDEKPSTSSNHL 265
+ + +GD F++ NL+ P+ E +++ L
Sbjct: 65 NLLKIKHGDLLFLFPSNLAGPSSEMETSAPQGL 97
>UNIPROTKB|Q8TAT6 [details] [associations]
symbol:NPLOC4 "Nuclear protein localization protein 4
homolog" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0042175 "nuclear outer membrane-endoplasmic
reticulum membrane network" evidence=ISS] [GO:0006944 "cellular
membrane fusion" evidence=ISS] [GO:0007030 "Golgi organization"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001876 PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547
UniPathway:UPA00144 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006944 GO:GO:0030433
GO:GO:0042175 GO:GO:0007030 TCDB:3.A.16.1.1 KO:K14015
InterPro:IPR007717 InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543
eggNOG:COG5100 InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 HOGENOM:HOG000008139 EMBL:AB040932 EMBL:AK000664
EMBL:AK023046 EMBL:AK023272 EMBL:BC025930 EMBL:AL834300
IPI:IPI00001676 IPI:IPI00290543 RefSeq:NP_060391.2
UniGene:Hs.464333 ProteinModelPortal:Q8TAT6 SMR:Q8TAT6
DIP:DIP-44059N IntAct:Q8TAT6 MINT:MINT-3043958 STRING:Q8TAT6
PhosphoSite:Q8TAT6 DMDM:50428974 PaxDb:Q8TAT6 PRIDE:Q8TAT6
DNASU:55666 Ensembl:ENST00000331134 Ensembl:ENST00000374747
GeneID:55666 KEGG:hsa:55666 UCSC:uc002kat.4 UCSC:uc002kau.3
CTD:55666 GeneCards:GC17M079523 HGNC:HGNC:18261 HPA:HPA021560
HPA:HPA023295 MIM:606590 neXtProt:NX_Q8TAT6 PharmGKB:PA143485558
HOVERGEN:HBG052659 OrthoDB:EOG4DNF3Z ChiTaRS:NPLOC4
GenomeRNAi:55666 NextBio:60422 ArrayExpress:Q8TAT6 Bgee:Q8TAT6
CleanEx:HS_NPLOC4 Genevestigator:Q8TAT6 GermOnline:ENSG00000182446
Uniprot:Q8TAT6
Length = 608
Score = 792 (283.9 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 141/226 (62%), Positives = 176/226 (77%)
Query: 297 NIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQNVKHMS 354
N+VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E VKHMS
Sbjct: 104 NVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMS 163
Query: 355 FHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHV 414
FHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNRQ YRHV
Sbjct: 164 FHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHV 223
Query: 415 DNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRD 474
DN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPPQ +++
Sbjct: 224 DNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQN 283
Query: 475 KIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
++LL DPKAEVV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 284 SLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 329
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 333 TYFLSSEECITAGDFQNKHPNMCRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 392
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 393 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 427
Score = 252 (93.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 303 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNMCRLSPDGH 362
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 363 FGSKFVTAVAT 373
Score = 135 (52.6 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+R+QSP G VKRI + +T +K+ KEF F+++ RNKT EI +S ++++
Sbjct: 6 IIRVQSPDG-VKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSL 64
Query: 235 ASVGLSNGD--FVYMMNLSSPNDE 256
+ + +GD F++ +L+ P+ E
Sbjct: 65 NLLKIKHGDLLFLFPSSLAGPSSE 88
>ZFIN|ZDB-GENE-030131-5658 [details] [associations]
symbol:nploc4 "nuclear protein localization 4
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001876 PROSITE:PS01358 PROSITE:PS50199
SMART:SM00547 ZFIN:ZDB-GENE-030131-5658 GO:GO:0008270 GO:GO:0005622
KO:K14015 InterPro:IPR007717 InterPro:IPR024682 Pfam:PF05021
Pfam:PF11543 eggNOG:COG5100 InterPro:IPR007716 InterPro:IPR016563
Pfam:PF05020 PIRSF:PIRSF010052 HSSP:Q9ES54
GeneTree:ENSGT00390000018731 OMA:NEVMPLR HOGENOM:HOG000008139
CTD:55666 HOVERGEN:HBG052659 OrthoDB:EOG4DNF3Z EMBL:AL954682
EMBL:BC045845 IPI:IPI00501330 RefSeq:NP_956101.1 UniGene:Dr.10558
SMR:Q7ZVI8 STRING:Q7ZVI8 Ensembl:ENSDART00000105516 GeneID:327447
KEGG:dre:327447 InParanoid:Q7ZVI8 NextBio:20810035 Uniprot:Q7ZVI8
Length = 624
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 169/349 (48%), Positives = 242/349 (69%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+RIQSP G+ K+I+ + +T +K+ KEF ++ F+++ RNKT EI S +++ +
Sbjct: 6 IVRIQSPDGM-KKISSTKHETAAAFLKKVAKEFGFSSNGFSVYLNRNKTGEILS-QNKAL 63
Query: 235 ASVGLSNGDFVYMMNLSS-PNDEKPSTSSNHLNIYEXXXXXXXXXXXXXEFKSKLSNAFS 293
+ + + +GD +++ S+ P+ E T+ H + S LS + S
Sbjct: 64 SLLKIKHGDMLFLYPSSAGPSSENMDTAQPHTS------SSFPSFPSSSSSSSSLSRSHS 117
Query: 294 SSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQN--VK 351
+ I ED++D+ L K +G++ R RD + CRHGA C+HC PLEP+DE+YL + VK
Sbjct: 118 APQ-IPEDDIDQYLSKQEGKIYRNRDPQLCRHGAMGKCVHCVPLEPFDEDYLNHLDPPVK 176
Query: 352 HMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVY 411
HMSFHAY+RK G D+GKFV LE++SC+IK GC HPPWP GIC+KCQP+AITLNRQ Y
Sbjct: 177 HMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHPPWPEGICTKCQPSAITLNRQKY 236
Query: 412 RHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQES 471
RHVDN+ FEN T+ +RFL++WR TG+QR+G LYG+Y H D+PLGI+A VAAIYEPPQ +
Sbjct: 237 RHVDNIMFENHTIADRFLDFWRKTGNQRMGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIA 296
Query: 472 SRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
+++ ++L+ DPKA+ VEEIA+ LGL +VGWIFTDL++ED ++GT +R
Sbjct: 297 TQNSLELIEDPKADAVEEIAAKLGLRKVGWIFTDLLSEDTRIGTVRYTR 345
Score = 362 (132.5 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 65/92 (70%), Positives = 73/92 (79%)
Query: 83 VTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALV 142
++ ECI AGH QN N CR +P G+FGSKFVT+ TG DNQVH EGYQVSNQCMALV
Sbjct: 352 LSAEECITAGHFQNQQANMCRLSPDGHFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALV 411
Query: 143 RDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
RD CL+P +DAPELGY KESS +QYVPDVFYK
Sbjct: 412 RDECLLPCRDAPELGYAKESSTEQYVPDVFYK 443
Score = 260 (96.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDL++ED ++GTVR+TRN DS+FLSA ECI AGH QN N CR +P G+
Sbjct: 319 LGLRKVGWIFTDLLSEDTRIGTVRYTRNKDSYFLSAEECITAGHFQNQQANMCRLSPDGH 378
Query: 74 FGSKFVTICVT 84
FGSKFVT+ T
Sbjct: 379 FGSKFVTVVAT 389
>UNIPROTKB|J9NXM8 [details] [associations]
symbol:NPLOC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001876
PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547 GO:GO:0008270
GO:GO:0005622 InterPro:IPR007717 Pfam:PF05021 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052
GeneTree:ENSGT00390000018731 EMBL:AAEX03006170
Ensembl:ENSCAFT00000046638 Uniprot:J9NXM8
Length = 520
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 141/226 (62%), Positives = 176/226 (77%)
Query: 297 NIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQNVKHMS 354
N+VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E VKHMS
Sbjct: 16 NVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMS 75
Query: 355 FHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHV 414
FHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNRQ YRHV
Sbjct: 76 FHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHV 135
Query: 415 DNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRD 474
DN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPPQ +++
Sbjct: 136 DNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQN 195
Query: 475 KIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
++LL DPKAEVV+EIA+ LGL +VGWIFTDLV+ED + GT SR
Sbjct: 196 SLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSR 241
Score = 368 (134.6 bits), Expect = 3.7e-33, P = 3.7e-33
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 245 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 304
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 305 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 339
Score = 251 (93.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 215 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 274
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 275 FGSKFVTAVAT 285
>UNIPROTKB|F1LQX9 [details] [associations]
symbol:Nploc4 "Nuclear protein localization protein 4
homolog" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001876 PROSITE:PS01358 PROSITE:PS50199
SMART:SM00547 RGD:620794 GO:GO:0008270 GO:GO:0005622
InterPro:IPR007717 Pfam:PF05021 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052
GeneTree:ENSGT00390000018731 IPI:IPI00191492 PRIDE:F1LQX9
Ensembl:ENSRNOT00000054973 ArrayExpress:F1LQX9 Uniprot:F1LQX9
Length = 539
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 143/232 (61%), Positives = 179/232 (77%)
Query: 291 AFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQ 348
AF + + +VEDE+D+ L K DG++ R RD + CRHG C+HC PLEP+DE+YL E
Sbjct: 30 AFGAPH-VVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEP 88
Query: 349 NVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNR 408
VKHMSFHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNR
Sbjct: 89 PVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNR 148
Query: 409 QVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPP 468
Q YRHVDN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPP
Sbjct: 149 QKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPP 208
Query: 469 QESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
Q +++ ++LL DPKAEVV+EIAS LGL +VGWIFTDLV+ED + GT SR
Sbjct: 209 QIGTQNSLELLEDPKAEVVDEIASKLGLRKVGWIFTDLVSEDTRKGTVRYSR 260
Score = 368 (134.6 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 264 TYFLSSEECITAGDFQNKHPNICRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 323
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 324 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 358
Score = 251 (93.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 234 LGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPDGH 293
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 294 FGSKFVTAVAT 304
>UNIPROTKB|I3L829 [details] [associations]
symbol:NPLOC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001876 PROSITE:PS01358
PROSITE:PS50199 SMART:SM00547 GO:GO:0008270 GO:GO:0005622
InterPro:IPR007717 Pfam:PF05021 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052
GeneTree:ENSGT00390000018731 OMA:NEVMPLR EMBL:FP340396
Ensembl:ENSSSCT00000029529 Uniprot:I3L829
Length = 539
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 140/226 (61%), Positives = 176/226 (77%)
Query: 297 NIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLR--EQNVKHMS 354
N+VED++D+ L + DG++ R RD + CRHG C+HC PLEP+DE+YL E VKHMS
Sbjct: 35 NVVEDDIDQFLSRQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMS 94
Query: 355 FHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHV 414
FHAY+RK G D+GKFV LE++SC+IK GC H PWP GIC+KCQP+AITLNRQ YRHV
Sbjct: 95 FHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHV 154
Query: 415 DNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRD 474
DN+ FEN T+ +RFL++WR TG+Q G LYG+Y H D+PLGI+A VAAIYEPPQ +++
Sbjct: 155 DNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQN 214
Query: 475 KIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
++LL DPKAEVV+EIA+ LGL QVGWIFTDLV+ED + GT SR
Sbjct: 215 SLELLEDPKAEVVDEIAAKLGLKQVGWIFTDLVSEDARKGTVRYSR 260
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 80 TICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCM 139
T ++ ECI AG QN HPN CR +P G+FGSKFVT TG DNQVH EGYQVSNQCM
Sbjct: 264 TYFLSSEECITAGDFQNKHPNVCRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM 323
Query: 140 ALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYK 174
ALVRD CL+P KDAPELGY KESS +QYVPDVFYK
Sbjct: 324 ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYK 358
Score = 256 (95.2 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 47/71 (66%), Positives = 56/71 (78%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL QVGWIFTDLV+ED + GTVR++RN D++FLS+ ECI AG QN HPN CR +P G+
Sbjct: 234 LGLKQVGWIFTDLVSEDARKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNVCRLSPDGH 293
Query: 74 FGSKFVTICVT 84
FGSKFVT T
Sbjct: 294 FGSKFVTAVAT 304
>WB|WBGene00019120 [details] [associations]
symbol:npl-4.1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001876 PROSITE:PS01358 PROSITE:PS50199
SMART:SM00547 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0008270 GO:GO:0040011 EMBL:FO080594
InterPro:IPR007717 Pfam:PF05021 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052
GeneTree:ENSGT00390000018731 RefSeq:NP_495096.1
ProteinModelPortal:H2KYU6 SMR:H2KYU6 IntAct:H2KYU6 PRIDE:H2KYU6
EnsemblMetazoa:F59E12.4b GeneID:173952 KEGG:cel:CELE_F59E12.4
CTD:173952 WormBase:F59E12.4b OMA:YELAYIR Uniprot:H2KYU6
Length = 529
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 106/222 (47%), Positives = 149/222 (67%)
Query: 301 DEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLR 360
++VD L DGQ++R + CRH C +C P++P+DEEYL+E+++KHMSFHA++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 361 KQCAGVDRGKFVV--LEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVE 418
K +G + LE+ C +K C H P+P+GIC+KC+P +TLNRQ +RHVDN++
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKCKPQVVTLNRQKFRHVDNIQ 130
Query: 419 FENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKL 478
EN+ LV +FL+YWR++GHQR+G L G+YQ H +VPLGIKA VAAIYEPPQ D I+
Sbjct: 131 IENQELVNQFLDYWRLSGHQRVGFLIGQYQPHLEVPLGIKATVAAIYEPPQHCREDGIEF 190
Query: 479 LPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
L D + ++ + LGL +VGWIFTD + GT +R
Sbjct: 191 LEDKNQKTIDNLLEMLGLQRVGWIFTDCWTANSAEGTVHYTR 232
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 83 VTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALV 142
++ ECI A LQN HPN ++ ++GSKFVT+ +GD+ V+ GYQVSNQC A+V
Sbjct: 239 LSAEECITAAMLQNQHPNITEYSMDRHYGSKFVTVVASGDESMHVNFHGYQVSNQCAAMV 298
Query: 143 RDGCLIPTKDAPELGYIKES--SDKQYVPDVFYKI 175
L PT PEL Y++E+ S++ Y+ DV + +
Sbjct: 299 EADILCPTLYTPELAYVRETPLSEEHYITDVQFSM 333
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 41/85 (48%), Positives = 54/85 (63%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTD + GTV +TR+ DS FLSA ECI A LQN HPN ++ +
Sbjct: 206 LGLQRVGWIFTDCWTANSAEGTVHYTRHKDSFFLSAEECITAAMLQNQHPNITEYSMDRH 265
Query: 74 FGSKFVTICVTVNECIMAGHLQNLH 98
+GSKFVT+ + +E + H+ N H
Sbjct: 266 YGSKFVTVVASGDESM---HV-NFH 286
>WB|WBGene00019121 [details] [associations]
symbol:npl-4.2 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0071712
"ER-associated misfolded protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001876
PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0040011 EMBL:FO080594 GO:GO:0034098 GO:GO:0071712 KO:K14015
InterPro:IPR007717 Pfam:PF05021 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052 HSSP:Q9ES54
GeneTree:ENSGT00390000018731 OMA:NEVMPLR HOGENOM:HOG000008139
GeneID:3565577 KEGG:cel:CELE_F59E12.5 UCSC:F59E12.5a CTD:3565577
NextBio:957009 RefSeq:NP_495093.1 ProteinModelPortal:Q95QZ9
SMR:Q95QZ9 IntAct:Q95QZ9 MINT:MINT-1108365 STRING:Q95QZ9
PRIDE:Q95QZ9 EnsemblMetazoa:F59E12.5b WormBase:F59E12.5b
InParanoid:Q95QZ9 ArrayExpress:Q95QZ9 Uniprot:Q95QZ9
Length = 529
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 106/222 (47%), Positives = 149/222 (67%)
Query: 301 DEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLR 360
++VD L DGQ++R + CRH C +C P++P+DEEYL+E+++KHMSFHA++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 361 KQCAGVDRGKFVV--LEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVE 418
K +G + LE+ C +K C H P+P+GIC+KC+P +TLNRQ +RHVDN++
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKCKPQVVTLNRQKFRHVDNIQ 130
Query: 419 FENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKL 478
EN+ LV +FL+YWR++GHQR+G L G+YQ H +VPLGIKA VAAIYEPPQ D I+
Sbjct: 131 IENQELVNQFLDYWRLSGHQRVGFLIGQYQPHLEVPLGIKATVAAIYEPPQHCREDGIEF 190
Query: 479 LPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
L D + ++ + LGL +VGWIFTD + GT +R
Sbjct: 191 LEDKNQKTIDNLLEMLGLQRVGWIFTDCWTANSAEGTVHYTR 232
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 83 VTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALV 142
++ ECI A LQN HPN ++ ++GSKFVT+ +GD+ V+ GYQVSNQC A+V
Sbjct: 239 LSAEECITAAMLQNQHPNITEYSMDRHYGSKFVTVVASGDESMHVNFHGYQVSNQCAAMV 298
Query: 143 RDGCLIPTKDAPELGYIKES--SDKQYVPDVFYKI 175
L PT PEL Y++E+ S++ Y+ DV + +
Sbjct: 299 EADILCPTLYTPELAYVRETPLSEEHYITDVQFSM 333
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 41/85 (48%), Positives = 54/85 (63%)
Query: 14 LGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGY 73
LGL +VGWIFTD + GTV +TR+ DS FLSA ECI A LQN HPN ++ +
Sbjct: 206 LGLQRVGWIFTDCWTANSAEGTVHYTRHKDSFFLSAEECITAAMLQNQHPNITEYSMDRH 265
Query: 74 FGSKFVTICVTVNECIMAGHLQNLH 98
+GSKFVT+ + +E + H+ N H
Sbjct: 266 YGSKFVTVVASGDESM---HV-NFH 286
>POMBASE|SPBC1711.10c [details] [associations]
symbol:npl4 "Cdc48-Npl4-Ufd1 complex subunit Npl4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=ISO]
[GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane
network" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
PomBase:SPBC1711.10c GO:GO:0005829 GO:GO:0005634 GO:GO:0048471
GO:GO:0015031 EMBL:CU329671 GO:GO:0031965 GenomeReviews:CU329671_GR
GO:GO:0030433 GO:GO:0051028 GO:GO:0034098 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 eggNOG:COG5100
InterPro:IPR007716 InterPro:IPR016563 Pfam:PF05020
PIRSF:PIRSF010052 HOGENOM:HOG000008139 OrthoDB:EOG49GPR1
RefSeq:NP_595883.2 STRING:Q9P780 EnsemblFungi:SPBC1711.10c.1
GeneID:2539821 NextBio:20800970 Uniprot:Q9P780
Length = 572
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 133/350 (38%), Positives = 194/350 (55%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTY---NFALFKQRNKTDEIFSS-R 230
ILR +S G+ R +DT L KI + N Y N +L + + IFS+
Sbjct: 2 ILRFRSKRGMA-RAEFQPTDTLAMLSAKILSDILKNDYSPENVSLCQNESDQGVIFSNLN 60
Query: 231 DQTIASVGLSNGDFVYMMNLSSPNDEKPSTSSNHLNIYEXXXXXXXXXXXXXEFKSKLSN 290
DQT+ GL++G +Y+ L +PN + S S+N + E K +
Sbjct: 61 DQTLQDAGLTHGQMLYL-RLGTPNSDIAS-SNNEPALTVTGAPKQVSTPDVSEKKPSMP- 117
Query: 291 AFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNV 350
+++D +D L K DG ++R CRHG +C +CSPLEPYDE Y +E +
Sbjct: 118 -------VIQDPIDDSLEKEDGLIRRSMTS-LCRHGPKGMCDYCSPLEPYDESYRQENKI 169
Query: 351 KHMSFHAYLRKQCAGVDR----GKFVV-LEDLSCRIKEGCRE-HPPWPRGICSKCQPNAI 404
KH+SFHAYLRK + V++ F+ LE+ S +KE C HPPWP GIC+KCQP+ +
Sbjct: 170 KHLSFHAYLRKINSNVNKYASSQSFIPPLEEPSFTVKEKCPSGHPPWPAGICTKCQPSTV 229
Query: 405 TLNRQVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAI 464
LN Q +R +D++EF + +V+ FL WR +G QR+G YG ++ + +VPLGIK V+ AI
Sbjct: 230 MLNLQPFRVIDHIEFASPGIVDSFLNKWRQSGFQRIGYTYGHFEQYNNVPLGIKGVIEAI 289
Query: 465 YEPPQESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLG 514
YEPPQ S D + L +VE++A++ GL ++G IFTDL + G
Sbjct: 290 YEPPQVSEADGVTLEEWADEALVEQVATACGLRRIGIIFTDLTDDGSNSG 339
Score = 166 (63.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 87 ECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGC 146
E + + Q NPC+++ SGYFGSKFVT ++G+ + ++ + YQVSN AL +
Sbjct: 356 EVYNSANFQTKFKNPCKWSRSGYFGSKFVTSVISGNLNGEIEVMSYQVSNIGTALYQADL 415
Query: 147 LIPTKDAPELGYIKESSDKQYVPDVFYK 174
+ P+ D P+ +K+ +YVPDV Y+
Sbjct: 416 IQPSVD-PDRMLVKKEDQTRYVPDVLYR 442
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 15 GLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGYF 74
GL ++G IFTDL + G V R+ DS+FLS+ E + + Q NPC+++ SGYF
Sbjct: 320 GLRRIGIIFTDLTDDGSNSGKVLCKRHSDSYFLSSLEVYNSANFQTKFKNPCKWSRSGYF 379
Query: 75 GSKFVTICVTVN 86
GSKFVT ++ N
Sbjct: 380 GSKFVTSVISGN 391
>ASPGD|ASPL0000052804 [details] [associations]
symbol:AN0295 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IEA]
[GO:0000837 "Doa10p ubiquitin ligase complex" evidence=IEA]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0071629 "cytoplasm-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] GO:GO:0048471
EMBL:BN001308 GO:GO:0015031 GO:GO:0031965 GO:GO:0030433
EMBL:AACD01000006 GO:GO:0051028 GO:GO:0034098 GO:GO:0000837
GO:GO:0071629 GO:GO:0072671 KO:K14015 InterPro:IPR007717
Pfam:PF05021 eggNOG:COG5100 InterPro:IPR007716 InterPro:IPR016563
Pfam:PF05020 PIRSF:PIRSF010052 RefSeq:XP_657899.1 STRING:Q5BGN5
GeneID:2876073 KEGG:ani:AN0295.2 HOGENOM:HOG000008139 OMA:KGMCDYC
OrthoDB:EOG49GPR1 Uniprot:Q5BGN5
Length = 652
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 105/214 (49%), Positives = 139/214 (64%)
Query: 300 EDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYL 359
+ +D L K DG++ R RD+K C+H A +C +C PLEPYD +YL E+ +KH+SFH+YL
Sbjct: 145 QSALDDRLEKKDGKIHRSRDNKMCKHSAKGMCDYCMPLEPYDPKYLAEKKIKHLSFHSYL 204
Query: 360 RKQCAGVDRG--KFVVLEDLS---CRIKEGCRE-HPPWPRGICSKCQPNAITLNRQVYRH 413
RK A ++ K + LS R++ C HPPWP GIC+KCQP+AI+L Q YR
Sbjct: 205 RKINAATNKPELKSSFMPPLSEPYYRVRTDCPSGHPPWPEGICTKCQPSAISLQPQEYRM 264
Query: 414 VDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSR 473
VD+VEF L+ L++WR +G QRLG LYG Y+ + +VPLGIKAVV AIYEPPQ
Sbjct: 265 VDHVEFSTPDLINSLLDFWRKSGTQRLGYLYGTYEEYDEVPLGIKAVVQAIYEPPQVDEV 324
Query: 474 DKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLV 507
D + L + V+EIA GL +VG IFTDL+
Sbjct: 325 DGVTLHEWENEKDVDEIARLCGLEKVGVIFTDLL 358
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 87 ECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGC 146
E A LQ P R++ +GYFGS FVT ++GD++ + + YQ S + ++R
Sbjct: 382 EIAFASRLQMQQPKATRWSRTGYFGSNFVTCVLSGDEEGAITISSYQASVAAVEMIRADI 441
Query: 147 LIPTKDAPELGYIKESSD----KQYVPDVFYKILRIQSPVGIVKRIN 189
+ P+ + P + ++ D +Y+P+VFY+ + + G+ ++N
Sbjct: 442 IEPSAE-PSVMLVQSEDDDTNKSRYIPEVFYRKI---NEYGVSAQVN 484
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 15 GLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGYF 74
GL +VG IFTDL+ G+V R+IDS++LS+ E A LQ P R++ +GYF
Sbjct: 346 GLEKVGVIFTDLLDAGRGDGSVLCKRHIDSYYLSSLEIAFASRLQMQQPKATRWSRTGYF 405
Query: 75 GSKFVTICV 83
GS FVT CV
Sbjct: 406 GSNFVT-CV 413
>SGD|S000000374 [details] [associations]
symbol:NPL4 "Substrate-recruiting cofactor of the
Cdc48p-Npl4p-Ufd1p segregase" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0000837 "Doa10p ubiquitin ligase complex" evidence=IDA]
[GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane
network" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=ISM] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:1900182 "positive regulation of protein localization to
nucleus" evidence=IMP] [GO:0051228 "mitotic spindle disassembly"
evidence=IMP] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IDA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] SGD:S000000374
GO:GO:0016021 GO:GO:0048471 GO:GO:0031965 EMBL:BK006936
GO:GO:0051028 GO:GO:0034098 GO:GO:0030970 TCDB:3.A.16.1.2
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:1900182 EMBL:X72224 KO:K14015
InterPro:IPR007717 Pfam:PF05021 eggNOG:COG5100 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052
GeneTree:ENSGT00390000018731 OMA:NEVMPLR HOGENOM:HOG000008139
OrthoDB:EOG49GPR1 EMBL:X74437 EMBL:Z36039 PIR:S34340
RefSeq:NP_009729.1 ProteinModelPortal:P33755 DIP:DIP-1475N
IntAct:P33755 MINT:MINT-393298 STRING:P33755 PaxDb:P33755
PeptideAtlas:P33755 EnsemblFungi:YBR170C GeneID:852468
KEGG:sce:YBR170C CYGD:YBR170c NextBio:971420 Genevestigator:P33755
GermOnline:YBR170C Uniprot:P33755
Length = 580
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 123/358 (34%), Positives = 195/358 (54%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKI--NKEFELNTYNFALFKQRNKTDEIFSS-RD 231
++R +S G R++ +D + EK+ N + + F + ++ + S D
Sbjct: 2 LIRFRSKNG-THRVSCQENDLFGTVIEKLVGNLDPNADVDTFTVCEKPGQGIHAVSELAD 60
Query: 232 QTIASVGLSNGDFVYMMNLSSPNDEKPSTSSNHLNIYEXXXXXXXXXXXXXEFKSKLSNA 291
+T+ +GL +GD + ++N S +KP+ + +N+ + K +
Sbjct: 61 RTVMDLGLKHGDML-ILNYS----DKPANEKDGVNV--------EIGSVGIDSKGIRQHR 107
Query: 292 FSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVK 351
+ I E VD+EL K DG + R++ K C+HG +C +CSPL P+D+EY + +K
Sbjct: 108 YGPLR-IKELAVDEELEKEDGLIPRQKS-KLCKHGDRGMCEYCSPLPPWDKEYHEKNKIK 165
Query: 352 HMSFHAYLRKQCAGVDR---GKFVV--LEDLSCRIKEGCRE-HPPWPRGICSKCQPNAIT 405
H+SFH+YL+K ++ G + L + RI + C H PWPRGICSKCQP+AIT
Sbjct: 166 HISFHSYLKKLNENANKKENGSSYISPLSEPDFRINKRCHNGHEPWPRGICSKCQPSAIT 225
Query: 406 LNRQVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIY 465
L +Q +R VD+VEF+ ++ F++ WR TG QR G +YG Y + + PLGIKAVV AIY
Sbjct: 226 LQQQEFRMVDHVEFQKSEIINEFIQAWRYTGMQRFGYMYGSYSKYDNTPLGIKAVVEAIY 285
Query: 466 EPPQESSRDKIKL-LPDPKAEV--VEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR 520
EPPQ +D + + + K E+ ++ A +GL+++G IFTDL G+ F R
Sbjct: 286 EPPQHDEQDGLTMDVEQVKNEMLQIDRQAQEMGLSRIGLIFTDLSDAGAGDGSVFCKR 343
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 87 ECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGC 146
E IMA Q HPN +++ G+F SKFVT ++G+ + ++ + YQVS + ALV
Sbjct: 354 EVIMAARHQTRHPNVSKYSEQGFFSSKFVTCVISGNLEGEIDISSYQVSTEAEALVTAD- 412
Query: 147 LIPTKDAPELGYIKESSDKQYVPDVFY 173
+I P + YI +++D++YVP++FY
Sbjct: 413 MISGSTFPSMAYINDTTDERYVPEIFY 439
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 10 QQPNLGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFA 69
Q +GL+++G IFTDL G+V R+ DS FLS+ E IMA Q HPN +++
Sbjct: 313 QAQEMGLSRIGLIFTDLSDAGAGDGSVFCKRHKDSFFLSSLEVIMAARHQTRHPNVSKYS 372
Query: 70 PSGYFGSKFVTICVTVNECIMAGHLQ 95
G+F SKFVT C+++G+L+
Sbjct: 373 EQGFFSSKFVT-------CVISGNLE 391
>CGD|CAL0001521 [details] [associations]
symbol:NPL4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0036266
"Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IEA] [GO:0000837
"Doa10p ubiquitin ligase complex" evidence=IEA] [GO:1900182
"positive regulation of protein localization to nucleus"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0072671 "mitochondria-associated
protein catabolic process" evidence=IEA] [GO:0071629
"cytoplasm-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] GO:GO:0048471 GO:GO:0005789
GO:GO:0015031 GO:GO:0031965 GO:GO:0051028 EMBL:AACQ01000041
EMBL:AACQ01000040 KO:K14015 InterPro:IPR007717 Pfam:PF05021
RefSeq:XP_718457.1 RefSeq:XP_718540.1 ProteinModelPortal:Q5AA50
STRING:Q5AA50 GeneID:3639812 GeneID:3639820 KEGG:cal:CaO19.2434
KEGG:cal:CaO19.9970 eggNOG:COG5100 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052 Uniprot:Q5AA50
Length = 598
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 115/311 (36%), Positives = 172/311 (55%)
Query: 204 NKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDFVYMMNLSSPNDEKPSTSSN 263
N + +L + A K ++K + ++QT+ +GL NGD +Y+ S ND P+T++
Sbjct: 49 NNKIDLQSLTIAN-KPQDKGKSSYEFQNQTVNELGLKNGDMLYVNYESVTNDSGPTTTAT 107
Query: 264 HLNIYEXXXXXXXXXXXXXEFKSKLSNAFSSSNNIVEDE--VDKELWKTDGQVKRKRDDK 321
+ +++ +S + +E +D+EL K DG + R
Sbjct: 108 NTTTNTASGNTIPITGPVPSIP--INSVVTSHGPLKVEELPIDQELDKEDGLITRPLSS- 164
Query: 322 FCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDR--GK-FVVLEDLS 378
CRHG +C +CSPL P+DE Y ++ +KH+SFHAYL++Q + G F L+ +
Sbjct: 165 MCRHGPKGMCEYCSPLPPWDENYRKDHAIKHISFHAYLKQQLEKLKSSGGSYFPPLDPVD 224
Query: 379 CRIKEGCRE-HPPWPRGICSKCQPNAITLNRQVYRHVDNVEFENRTLVERFLEYWRVTGH 437
I C + H P+P GICSKCQP+ ITL Q +R VD++EF + ++ F+ WRV+G
Sbjct: 225 YSIDLTCNQGHKPYPNGICSKCQPSPITLQLQKFRMVDHLEFADSFILNDFINVWRVSGV 284
Query: 438 QRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLP-DPKAE-VVEEIASSLG 495
QR G LYG+Y PLGIKA+V I EPPQ D I LL D + E +V+++A+ G
Sbjct: 285 QRFGYLYGRYAKSEKTPLGIKAIVETIIEPPQHDELDGITLLDWDQQEEKMVDQVANKFG 344
Query: 496 LTQVGWIFTDL 506
L +VG IFTDL
Sbjct: 345 LYKVGIIFTDL 355
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 87 ECIMAGHLQNLHPNPCRFAPS---GYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVR 143
E IMA Q +PN +++ + G F SKFVT ++G + ++ YQVS ALV+
Sbjct: 380 EIIMAAKFQLKYPNISKYSTAKNNGQFSSKFVTCVISGGLNGEIEPRSYQVSTSAEALVK 439
Query: 144 DGCLIPTKDAPELGYIKESSDKQYVPDVFY 173
+I P Y+ ES++ +YVPD+ Y
Sbjct: 440 AD-IITGCTQPSQIYVNESNNHRYVPDIQY 468
>UNIPROTKB|Q5AA50 [details] [associations]
symbol:NPL4 "Nuclear protein localization protein 4"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] GO:GO:0048471 GO:GO:0005789
GO:GO:0015031 GO:GO:0031965 GO:GO:0051028 EMBL:AACQ01000041
EMBL:AACQ01000040 KO:K14015 InterPro:IPR007717 Pfam:PF05021
RefSeq:XP_718457.1 RefSeq:XP_718540.1 ProteinModelPortal:Q5AA50
STRING:Q5AA50 GeneID:3639812 GeneID:3639820 KEGG:cal:CaO19.2434
KEGG:cal:CaO19.9970 eggNOG:COG5100 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052 Uniprot:Q5AA50
Length = 598
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 115/311 (36%), Positives = 172/311 (55%)
Query: 204 NKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDFVYMMNLSSPNDEKPSTSSN 263
N + +L + A K ++K + ++QT+ +GL NGD +Y+ S ND P+T++
Sbjct: 49 NNKIDLQSLTIAN-KPQDKGKSSYEFQNQTVNELGLKNGDMLYVNYESVTNDSGPTTTAT 107
Query: 264 HLNIYEXXXXXXXXXXXXXEFKSKLSNAFSSSNNIVEDE--VDKELWKTDGQVKRKRDDK 321
+ +++ +S + +E +D+EL K DG + R
Sbjct: 108 NTTTNTASGNTIPITGPVPSIP--INSVVTSHGPLKVEELPIDQELDKEDGLITRPLSS- 164
Query: 322 FCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDR--GK-FVVLEDLS 378
CRHG +C +CSPL P+DE Y ++ +KH+SFHAYL++Q + G F L+ +
Sbjct: 165 MCRHGPKGMCEYCSPLPPWDENYRKDHAIKHISFHAYLKQQLEKLKSSGGSYFPPLDPVD 224
Query: 379 CRIKEGCRE-HPPWPRGICSKCQPNAITLNRQVYRHVDNVEFENRTLVERFLEYWRVTGH 437
I C + H P+P GICSKCQP+ ITL Q +R VD++EF + ++ F+ WRV+G
Sbjct: 225 YSIDLTCNQGHKPYPNGICSKCQPSPITLQLQKFRMVDHLEFADSFILNDFINVWRVSGV 284
Query: 438 QRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLP-DPKAE-VVEEIASSLG 495
QR G LYG+Y PLGIKA+V I EPPQ D I LL D + E +V+++A+ G
Sbjct: 285 QRFGYLYGRYAKSEKTPLGIKAIVETIIEPPQHDELDGITLLDWDQQEEKMVDQVANKFG 344
Query: 496 LTQVGWIFTDL 506
L +VG IFTDL
Sbjct: 345 LYKVGIIFTDL 355
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 87 ECIMAGHLQNLHPNPCRFAPS---GYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVR 143
E IMA Q +PN +++ + G F SKFVT ++G + ++ YQVS ALV+
Sbjct: 380 EIIMAAKFQLKYPNISKYSTAKNNGQFSSKFVTCVISGGLNGEIEPRSYQVSTSAEALVK 439
Query: 144 DGCLIPTKDAPELGYIKESSDKQYVPDVFY 173
+I P Y+ ES++ +YVPD+ Y
Sbjct: 440 AD-IITGCTQPSQIYVNESNNHRYVPDIQY 468
>UNIPROTKB|A4RN19 [details] [associations]
symbol:NPL4 "Nuclear protein localization protein 4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane
network" evidence=ISS] GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0048471 GO:GO:0015031 GO:GO:0031965 GO:GO:0030433
GO:GO:0042175 GO:GO:0051028 EMBL:CM001232 GO:GO:0034098
GO:GO:0000837 GO:GO:0071629 GO:GO:0072671 KO:K14015
InterPro:IPR007717 Pfam:PF05021 eggNOG:COG5100 InterPro:IPR007716
InterPro:IPR016563 Pfam:PF05020 PIRSF:PIRSF010052 OrthoDB:EOG49GPR1
RefSeq:XP_003713511.1 RefSeq:XP_003713512.1 STRING:A4RN19
GeneID:2677741 KEGG:mgr:MGG_04413 Uniprot:A4RN19
Length = 669
Score = 487 (176.5 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 97/214 (45%), Positives = 136/214 (63%)
Query: 300 EDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYL 359
+ +D L K DG++ RKRD CRHG +C +C PL+P+D ++L E+ +K++S HA+L
Sbjct: 141 QSPLDDRLDKKDGKIPRKRD-AMCRHGPKGMCDYCQPLDPFDAKFLAEKKIKYLSMHAHL 199
Query: 360 RKQCAGVDR----GKFVV-LEDLSCRIKEGCRE-HPPWPRGICSKCQPNAITLNRQVYRH 413
RK + ++ F+ L + R+K C HP WP GICSKCQP+AITL Q +R
Sbjct: 200 RKINSATNKPELGSSFIPPLSEPYFRVKHDCPSGHPQWPEGICSKCQPSAITLQPQPFRM 259
Query: 414 VDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSR 473
VD+VEF + ++V+ F+ WR TG QR G++YGKY + +VPLGIKAVV AIYEPPQ
Sbjct: 260 VDHVEFASPSIVDSFINTWRRTGGQRYGIMYGKYSEYEEVPLGIKAVVQAIYEPPQVDEV 319
Query: 474 DKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLV 507
D + L + V ++A GL VG I+TDL+
Sbjct: 320 DGVSLNSWDNEKDVNQVARLCGLEPVGAIWTDLL 353
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 33/95 (34%), Positives = 56/95 (58%)
Query: 87 ECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGC 146
E A LQ HP P +++ +G FGS FVT ++G++ ++ + YQVSN+ + +VR
Sbjct: 377 EVCFAARLQAQHPKPSKWSDTGRFGSNFVTCIISGNEQGEIAISSYQVSNEAVEMVRADI 436
Query: 147 LIPTKDAPELGYIKE-------SSDKQYVPDVFYK 174
+ P+ D P + ++E +S +Y+PDVFY+
Sbjct: 437 MEPSAD-PTVMLVREEEEDDGSTSRTRYIPDVFYR 470
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 5 QKETLQQPNL-GLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHP 63
+K+ Q L GL VG I+TDL+ G+V R+ DS+FLS+ E A LQ HP
Sbjct: 330 EKDVNQVARLCGLEPVGAIWTDLLDAGAGDGSVVCKRHADSYFLSSLEVCFAARLQAQHP 389
Query: 64 NPCRFAPSGYFGSKFVTICVTVNE 87
P +++ +G FGS FVT ++ NE
Sbjct: 390 KPSKWSDTGRFGSNFVTCIISGNE 413
Score = 42 (19.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 15/78 (19%), Positives = 36/78 (46%)
Query: 175 ILRIQSPVGIVKRININRSDTC----KDLFEKINKEFELNTYNFALFKQRNKTDEIFSS- 229
+LR++ P G++ RI ++ DT ++L K+ + T + ++
Sbjct: 2 LLRLRGPDGML-RIELDPKDTFNKLGQELMGKLPPTVDPATITVSNAPGSQGDKKLLKDI 60
Query: 230 RDQTIASVGLSNGDFVYM 247
+ ++GL +GD +++
Sbjct: 61 AKYKVEAIGLKHGDLIFV 78
>DICTYBASE|DDB_G0290227 [details] [associations]
symbol:npl4 "nuclear protein localization 4"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042175 "nuclear outer
membrane-endoplasmic reticulum membrane network" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR000555 SMART:SM00232 UniPathway:UPA00144
dictyBase:DDB_G0290227 GO:GO:0005783 GenomeReviews:CM000154_GR
EMBL:AAFI02000161 GO:GO:0030433 GO:GO:0042175 KO:K14015
InterPro:IPR007717 Pfam:PF05021 eggNOG:COG5100 RefSeq:XP_635845.1
ProteinModelPortal:Q54GD3 EnsemblProtists:DDB0233722 GeneID:8627553
KEGG:ddi:DDB_G0290227 OMA:CIEWRES Uniprot:Q54GD3
Length = 576
Score = 159 (61.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 46/131 (35%), Positives = 69/131 (52%)
Query: 382 KEGCREHPPWPRGICSKC----QPNAITLNRQVYRHVDN--VEFENRTLVERFLEYWRVT 435
K C+ H G C +C + + L Q H V+F++ + ++++ +
Sbjct: 259 KRRCKNHGI--NGSCVECIEWRESLKMRLKSQDNPHAPGALVDFQSANIFQQYIANSKYE 316
Query: 436 GHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIK--LLPDPKAEVVEEIASS 493
QR+G L+G + V VV +IYEPPQE +DK LLPDP A+ +E +AS
Sbjct: 317 -QQRIGFLFGNFLSDGSV------VVDSIYEPPQEC-KDKQTPTLLPDPLADKIESMASM 368
Query: 494 LGLTQVGWIFT 504
LGLT+VGWIF+
Sbjct: 369 LGLTRVGWIFS 379
Score = 100 (40.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 175 ILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTI 234
I+ ++SP G K IN++ + KDL+ K+ KE ++ ++ K D D+ +
Sbjct: 2 IIAVRSPSGTTK-INVSDTAIVKDLYVKL-KENNVDIDGKSITK--TPRDPPLEVGDK-L 56
Query: 235 ASVGLSNGDFVYMM--NLSSPNDEKPSTSSNHLNIYEXXXXXXXXXXXXXEFKSKLSNAF 292
+S+G+ +GD ++++ N ++ ND K S+ SN+ N + KL N
Sbjct: 57 SSLGIKSGDLLHLVGNNNNNNNDNKASSGSNNNN------NNNNISKKEISYDEKLPNGL 110
Query: 293 SSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHC 334
+ DK ++ +D Q ++ C H NA C +C
Sbjct: 111 TPRCKHAVG--DKCVFCSDAQGMKR-----CDHPENATCPNC 145
Score = 64 (27.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 323 CRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIK 382
C HG+ A C++C + D++ E N + K + + + FV + +K
Sbjct: 181 CNHGSTATCVNCMDKDDEDQDDNEEDNKDN--------KDNSEIKKSGFVPKVAIKNEVK 232
Query: 383 EGCREHPPWPRGI-C-SKCQPNAITL-NRQVYRH 413
C H P + I C K PN+I + R+ H
Sbjct: 233 TKCL-HGPNQKCINCLPKDDPNSIEVPKRRCKNH 265
Score = 50 (22.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 289 SNAFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCS 335
SN +++NNI + E+ + +G R C+H C+ CS
Sbjct: 86 SNNNNNNNNISKKEISYDEKLPNGLTPR------CKHAVGDKCVFCS 126
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 315 KRKRDDKFCRHGANALCIHC 334
K KR C H A C +C
Sbjct: 151 KGKRLKWLCNHPAGGKCSNC 170
>TAIR|locus:2099142 [details] [associations]
symbol:NPL41 "AT3G63000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA]
UniPathway:UPA00144 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043161 EMBL:AL163816 EMBL:AY035064
EMBL:AY056362 IPI:IPI00542016 PIR:T48089 RefSeq:NP_191859.1
UniGene:At.24675 UniGene:At.68075 PDB:1WF9 PDBsum:1WF9
ProteinModelPortal:Q9LYC2 SMR:Q9LYC2 IntAct:Q9LYC2 PaxDb:Q9LYC2
PRIDE:Q9LYC2 DNASU:825475 EnsemblPlants:AT3G63000.1 GeneID:825475
KEGG:ath:AT3G63000 TAIR:At3g63000 eggNOG:NOG245043
HOGENOM:HOG000237867 InParanoid:Q9LYC2 KO:K14015 OMA:YEGERTI
PhylomeDB:Q9LYC2 ProtClustDB:CLSN2684296 EvolutionaryTrace:Q9LYC2
Genevestigator:Q9LYC2 GermOnline:AT3G63000 InterPro:IPR007717
InterPro:IPR024682 Pfam:PF05021 Pfam:PF11543 Uniprot:Q9LYC2
Length = 413
Score = 115 (45.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 406 LNRQVYRHVDNVEFEN--RTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAA 463
+ RQ H D+V F+ + F+ +R G +YG V +
Sbjct: 121 VGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNF------ 174
Query: 464 IYEPPQESSRDKIKLLPDPKAEV-VEEIASSLGLTQVGWIFTDLVAED 510
IYEPPQ+ D + L+ D + E V+ IA LG+ +VG+IF V +D
Sbjct: 175 IYEPPQQGMEDNLILMRDSEEEKRVDAIALGLGMRRVGFIFNQTVTQD 222
Score = 44 (20.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 175 ILRIQSPVGIVKRININRSD-TCKDLFEKINKEFELNTYNFALFKQRN----KTDEIFSS 229
+LR++S G+ +R++++ T L I + ++ +N L RN K+ F +
Sbjct: 3 MLRVRSRDGL-ERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLA 61
Query: 230 -RDQT-----IASVGLSNGDFVYM 247
D I+S+ L++G VY+
Sbjct: 62 FTDMADPNLRISSLNLAHGSMVYL 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 520 507 0.00086 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 617 (66 KB)
Total size of DFA: 322 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 42.84u 0.09s 42.93t Elapsed: 00:00:27
Total cpu time: 42.85u 0.09s 42.94t Elapsed: 00:00:31
Start: Thu Aug 15 13:16:20 2013 End: Thu Aug 15 13:16:51 2013