Query psy8927
Match_columns 1196
No_of_seqs 229 out of 285
Neff 4.4
Searched_HMMs 46136
Date Fri Aug 16 23:00:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8927.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8927hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12722 Hid1: High-temperatur 100.0 7E-163 2E-167 1500.2 50.2 769 1-1193 1-895 (895)
2 KOG2226|consensus 100.0 4E-163 8E-168 1397.6 40.0 755 1-1196 1-786 (786)
3 PF09742 Dymeclin: Dyggve-Melc 100.0 6.1E-71 1.3E-75 667.2 19.7 622 1-1172 1-678 (678)
4 KOG2226|consensus 100.0 6.9E-53 1.5E-57 486.9 13.9 323 170-577 9-394 (786)
5 PF12722 Hid1: High-temperatur 100.0 4.5E-47 9.7E-52 470.9 20.9 282 171-475 10-360 (895)
6 PF09742 Dymeclin: Dyggve-Melc 99.8 5.7E-19 1.2E-23 215.7 14.2 209 189-428 23-249 (678)
7 KOG2225|consensus 99.2 1.4E-11 3.1E-16 139.9 7.8 222 675-930 377-604 (695)
8 PF03378 CAS_CSE1: CAS/CSE pro 37.8 74 0.0016 38.9 6.9 94 789-906 18-111 (435)
9 PF03378 CAS_CSE1: CAS/CSE pro 28.3 1.4E+02 0.0031 36.5 7.3 67 759-849 43-109 (435)
10 KOG2225|consensus 28.0 44 0.00095 40.6 2.8 103 1-105 1-117 (695)
No 1
>PF12722 Hid1: High-temperature-induced dauer-formation protein
Probab=100.00 E-value=7.1e-163 Score=1500.16 Aligned_cols=769 Identities=46% Similarity=0.769 Sum_probs=622.3
Q ss_pred CCCchhhhHHHHHHHHhhcCCccCCCCChh-hHHhhccCCCCChhhhcccCChHHHHHHHhhCcchHHHHHHHHHHHHHH
Q psy8927 1 MGNSDTKLNFRQAVIQLTSKTQPIDASDNT-FWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVN 79 (1196)
Q Consensus 1 MG~sdsKL~Fr~~v~~L~~~~~~I~~~Dd~-fW~~fW~~~p~sa~DVF~Lisp~dIR~~Rd~~p~NlaTLi~~~v~rL~~ 79 (1196)
||++||||+||++|+||++++++++|.||. ||++||+ .|++++|||+||+|+|||++|+++|+|++|||+++++||+.
T Consensus 1 MG~sdsKl~fr~~i~~L~~~~~~~~~~dd~~fw~~fw~-~~~s~~Dvf~Li~~~diR~ir~~~~~Nl~tLi~~~~~~l~~ 79 (895)
T PF12722_consen 1 MGNSDSKLNFRKHIFKLAQERIIVDPDDDAFFWDQFWE-LPTSAEDVFSLISPADIRRIRDENPENLATLIRKLVERLVQ 79 (895)
T ss_pred CCchhhHHHHHHHHHHHcCCCcCCCCcccHHHHHHHHc-CCCCHHHHHhcCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988777889998 9999997 99999999999999999999999999999999999999999
Q ss_pred hhcCcCC--CccccchhhhhHHhhhhccccccc---cccccc-cccccccCCCCC---------CCC-CCCCCCCcccCC
Q psy8927 80 AVDSSCR--MAHEQQAVLNCTRLLTRLIPYIFE---DMDWRG-FFWSSLPSKSTS---------DEN-EGEGPDKAEDLQ 143 (1196)
Q Consensus 80 ~~~~~~~--~~~~~~~~LNCiRlLTRiLP~ifE---~~~w~~-fFWs~~~~~~~~---------~~~-~~~~~~~~e~l~ 143 (1196)
+++++++ +..+.++||||||+|||||||||| +++|++ |||++.+++... ++. ....++....|+
T Consensus 80 ~~~~~~~~~~~~~~~~~LNciRiLTRilP~i~E~~~~~~~~~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLg 159 (895)
T PF12722_consen 80 LANSPSFPSTPAPKQELLNCIRILTRILPFIFEADYDEEWEEEFFWSSRPKPSRGAQSASEVLFDEASSEEDDEQSPPLG 159 (895)
T ss_pred HhcCccccccchhhhHHHHHHHHHHHhhhHhhcccccccchhccccCCCCccccccccccccccccccccccccCCCCHH
Confidence 9999988 555667999999999999999999 789996 999998775211 000 000111111111
Q ss_pred -----------------------Cccccc-ccccCCcccCCCCCC-CchhhhhhHHHHHHHHHhhcccccCCCCCCCCcc
Q psy8927 144 -----------------------SIDSCE-YIWERGVGFATSPAR-CPAHESARTELLKLLLTCFSETIYQPPQDASDNT 198 (1196)
Q Consensus 144 -----------------------~ids~~-~IWe~GVG~~~~~~~-n~~~dsNR~EVLrLLLTl~Se~mY~~p~~~~D~~ 198 (1196)
+.+.|. .|||+|||++.+++. +++||+||+|||||||||||++||+||......+
T Consensus 160 ~~Ll~al~dLLF~~gFTv~~~~~~~~~~~~~iWe~GIg~~~~~~~~~~~~dsNR~EvLrLLLtl~S~~lY~~~~~~~~~~ 239 (895)
T PF12722_consen 160 ERLLDALVDLLFCPGFTVPSSSSSPDKVSYSIWEPGIGTNTSPPSPNKEHDSNRTEVLRLLLTLFSEPLYQPPSLSSTGN 239 (895)
T ss_pred HHHHHHHHHHhCCCCCcCCCccCCCCccceeeccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhchhhcCCCccCCCCC
Confidence 122334 499999999998886 9999999999999999999999999998335678
Q ss_pred chhhhccc--cccccccccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhcCCcccchhhhhhhhhHHhhhc---ccc
Q psy8927 199 FWNQFWSE--NVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLT---RLI 273 (1196)
Q Consensus 199 fW~qfW~e--~~~sa~DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~dp~~~~~~~~~~vLNCiRlLT---RvL 273 (1196)
.|..|++. +...+..++| |.|||+| .++| .+ +.+
T Consensus 240 ~~l~~l~s~~~~~~~l~L~~---------------SLlNt~~---------~y~p-----------------~~~~~~~l 278 (895)
T PF12722_consen 240 KFLTYLVSCTPRQLVLTLLC---------------SLLNTVC---------RYDP-----------------SGNEEWGL 278 (895)
T ss_pred eeeeeeccCcchhhhHHHHH---------------HHHHHHH---------hcCC-----------------CCcccccc
Confidence 99999983 3233677777 9999999 8998 45 889
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhhhcCCCCccccCCcchhhhhhhhcCCCCc
Q psy8927 274 PYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNL 353 (1196)
Q Consensus 274 PyifE~~~w~~fFWs~~p~~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~DLLFcpgFTv~~~~c~~q~l~~~l~~~~~ 353 (1196)
||.+- . +.|.++ +|++.+ .|+|+++++++.+
T Consensus 279 pY~~~-----------~----~~d~r~-------------~lV~~s---------------------lQlL~vlL~y~~~ 309 (895)
T PF12722_consen 279 PYNHL-----------V----FSDSRE-------------PLVTYS---------------------LQLLNVLLDYPPP 309 (895)
T ss_pred ccccc-----------c----ccCccc-------------HHHHHH---------------------HHHHHHheeCCCC
Confidence 99554 1 344444 899999 9999999998765
Q ss_pred cccccccccccchhhHhhhcccccccCCCCcccccccccCCCCCchhhhhhhcccCccchhhhHHHHHHhhccccccccc
Q psy8927 354 FINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYL 433 (1196)
Q Consensus 354 ~~~~~~~~hRtEdLkllLTgfSe~~~~p~~~~~~~~~~~~~~~~N~~~~~l~~lhr~~df~fiL~g~trLLn~pL~~s~l 433 (1196)
....... ...++. .....+|.||+|++|+||++||+||++||+|+|++|+..+--
T Consensus 310 ~~~~~~~-----------------~~~~~~--------~~~~~~N~~r~yl~~lhr~~D~~fi~~gl~~iL~~pl~~~~~ 364 (895)
T PF12722_consen 310 SQTNSSF-----------------SSETNL--------TSSKPKNLFRNYLSKLHREEDFQFILDGLTRILNNPLQSAIE 364 (895)
T ss_pred CCCcccc-----------------ccccCc--------CCCCcchHHHHHHhccCcHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 4332100 000000 014689999999999999999999999999999999863211
Q ss_pred CCCcchhhhhhhhhhhhhhhcccccchhhhccchhcccCcc-cccccCCCccccchhhHHHHHHHHhhccchhhhhhhhc
Q psy8927 434 PNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPL-LQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLK 512 (1196)
Q Consensus 434 p~~~~~~~~~q~liv~l~~~~~~~~~~~~l~g~~rll~npl-~qtYLP~S~Kki~~hqElLvLfWk~~d~n~~f~~~vl~ 512 (1196)
-++ |+. .++|+|+++|++.||||++||||++|||||||+.||++
T Consensus 365 ~es-----------------------------------~~f~~~~~lp~s~~~~~~~~e~l~l~W~l~~~Nk~F~~~v~~ 409 (895)
T PF12722_consen 365 QES-----------------------------------NPFSSSSYLPGSQKPSPWAQELLMLFWELIQCNKRFRNYVLD 409 (895)
T ss_pred ccc-----------------------------------cccccccccccccccchHHHHHHHHHHHHHhhCHHHHHHHhh
Confidence 111 122 47999999999999999999999999999999999999
Q ss_pred cCccchhhhhhhhhcccccccccccccchhhhHHHHHHHHHHhhhccccccchhhhhhhccccccccccccccchhhhhH
Q psy8927 513 SSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFI 592 (1196)
Q Consensus 513 s~~~~d~~v~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~f~ 592 (1196)
.+++|++|++|||++++|+||
T Consensus 410 -~~~~~llv~llyy~~~~~~~~---------------------------------------------------------- 430 (895)
T PF12722_consen 410 -KRALDLLVPLLYYLLEYRDDP---------------------------------------------------------- 430 (895)
T ss_pred -ccHHHHHHHHHHHHHHhcCCh----------------------------------------------------------
Confidence 999999999999999999999
Q ss_pred hhhhccccccccccCCCCCcccCCcccccccccccccccccccchhhhhHhhhhccccccccccCCCCCCCCCCCccccc
Q psy8927 593 LLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFT 672 (1196)
Q Consensus 593 ~~~~s~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1196)
T Consensus 431 -------------------------------------------------------------------------------- 430 (895)
T PF12722_consen 431 -------------------------------------------------------------------------------- 430 (895)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhhhHHHHHhhccccchhhhHhHHhhcccccccccccchhhhHHHHHHhhccccccccccCcCccC----CCC
Q psy8927 673 GNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSA----AVP 748 (1196)
Q Consensus 673 ~~~~~~~~~~~~f~~~~~~~~~~~~~l~~~l~~~~~~r~~~sk~GLvricvFILq~LS~ErnFGv~LNKpf~~----~~p 748 (1196)
+++|+||||+||||+||+||+||++|||||+. ++|
T Consensus 431 -----------------------------------------~~~glv~i~~fill~LS~e~~f~~~Ln~p~~~~~~~~lP 469 (895)
T PF12722_consen 431 -----------------------------------------SKQGLVRICSFILLYLSSERNFGVKLNKPFSAYYQNSLP 469 (895)
T ss_pred -----------------------------------------hhcccHHHHHHHHHHHccchHHHHHhccccchhhcccCC
Confidence 77799999999999999999999999999999 788
Q ss_pred --cccCCccccccchhhhhhhhhhccCcCCccccchhhhHhhhcchHh---------hhhccHHHHHHHHHHHHhhcCcc
Q psy8927 749 --MDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPY---------LKTLSMVASTKLLHLLEAFASPA 817 (1196)
Q Consensus 749 --i~ip~f~GTyADfLIisi~~LItt~~~rL~~ly~~LLtIL~NiSPY---------~k~LS~~assKLl~Lf~sfSsP~ 817 (1196)
+|||+|+||||||||++||+||+++++++.++||||++||+||+|| +|+||++||+||+|||++||+|+
T Consensus 470 ~~~~i~~~~gT~~DflI~~i~~ii~~~~~~~~~l~~~l~~il~Ni~p~~~s~~~~~~~~~LS~~as~~L~~L~~~~S~p~ 549 (895)
T PF12722_consen 470 NSFKIPVFPGTYADFLIISICNIITTSHGRLSSLYPCLLEILYNISPYTLSSKKSSNLKGLSYVASSKLLQLFSKFSSPS 549 (895)
T ss_pred CccccCCCCCcHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHhcccccccchhhhhhcCcCHHHHHHHHHHHHHhcChH
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred ccccCCCCchhHHHHHHHhhhhhcccccCchhhhhhhhHHHHHHHHHHhhhcCCcccccCCCChhhHHHHHHHHHHHhhh
Q psy8927 818 FLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQY 897 (1196)
Q Consensus 818 FL~~~~~n~~ll~~ll~~~~~ii~~~~~~~p~~~~ls~~~~~~l~~l~~~~ssp~fllane~Nh~LL~~LLE~fNnIIqy 897 (1196)
|| |++++||+||++|||+|||||||
T Consensus 550 fL-------------------------------------------------------~~~~~n~~ll~~LL~a~n~~i~~ 574 (895)
T PF12722_consen 550 FL-------------------------------------------------------LSNEFNHDLLALLLEAFNNIIQY 574 (895)
T ss_pred HH-------------------------------------------------------hcCCchHHHHHHHHHHHHHHHHh
Confidence 99 99999999999999999999999
Q ss_pred ccCCCcchhhHhhhhccccccccCC--CCChHHHHHhhcccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy8927 898 QFDGNSNLVYTIIRKRQIFYALSNL--PSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALP 975 (1196)
Q Consensus 898 Qf~~N~nLVYaIiR~r~~F~~L~~l--~s~~~eI~r~~~~~~~rr~~~~~~~~~~s~~ss~s~~~~~~~~s~~~s~~~~~ 975 (1196)
||++|+||||+|+|+|++|++|+++ +.++++++++.+ +|++...........++.+......+..++++....+
T Consensus 575 ~~~~n~~Lvyailr~~~~f~~L~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 650 (895)
T PF12722_consen 575 QFSGNPNLVYAILRNRKVFEQLRNFTLSSGQEEIERQNR----KRKDEAESDPISNSSSSSSSQSSRSPSSNNDSRSPSP 650 (895)
T ss_pred ccccchHHHHHHHhhHHHHHHHHHhhhhhhHHHHhhccc----ccccccccccccccccccccccCCCCccccccCCCCc
Confidence 9999999999999999999999997 677777777655 3222111110000011111111222222334433334
Q ss_pred CCCCccccccCCCCCCCCcccccccCccccccccCCCCCCCCCCCCCCcchhHHHHHhhhcccccccCCCCccccccccc
Q psy8927 976 AEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEK 1055 (1196)
Q Consensus 976 ~e~~~~~~~l~~~~g~d~~~e~~~~~~~~~~~~~~~~~~~sp~~~~s~~s~~~~~~~~~~~~~se~~~s~p~~~~~m~e~ 1055 (1196)
.++++..++++.++++++++++++.++ .+++++ ..++|.+.++|+++
T Consensus 651 ~~~~~~~~s~~~~~~~d~~s~~~~~~~----------~~s~~~-----------------------~~s~~~~~~~~se~ 697 (895)
T PF12722_consen 651 SEPPEENASFAIGPDDDDDSEENSPSP----------SQSSPS-----------------------SSSVPKQLQGMSEK 697 (895)
T ss_pred cCCCCCCcccccCCCcCccccccCCCC----------Cccccc-----------------------ccccccccCCcCcc
Confidence 444455555665666665554332110 011100 00344566677777
Q ss_pred ccC-CCCCCC----cccccCCCCCCCCcccCCCCccccChhHHHhhhcCCChHHHHHHHHHhhhhhHHHhhhcCCCCHHH
Q psy8927 1056 ESA-HPGGEN----ENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESE 1130 (1196)
Q Consensus 1056 ~~~-~~~~~~----~~s~~~~~~~s~~~~~~~~~~F~PT~eWv~SW~~~LPL~TIl~lIq~L~PqVe~~c~~kg~tde~e 1130 (1196)
+++ +|.+.. +++.++++..+ +....++++|+||++|++||+++|||||||++||+|+|||+++|.++|.+++++
T Consensus 698 a~~k~~~~~~~~s~~~~~~r~~~p~-g~s~~~~~kf~Pt~~Wv~SW~~~LpL~tIL~lIq~L~pqv~~i~~~~~~t~~~~ 776 (895)
T PF12722_consen 698 ARGKMPAGSPEFSRQNSSTRPSWPS-GMSFKSKGKFVPTQEWVESWKGKLPLQTILRLIQVLLPQVPKICIDKGLTDESE 776 (895)
T ss_pred ccccCCCCCCcccccccccccccCc-CcccccccCcCCCchHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 766 555542 23333333222 233477899999999999999999999999999999999999999999999999
Q ss_pred HH-----HHhhccccccccC-------CCCCccccccccCcchhhHHHHHhHHhhhhcCC--------------------
Q psy8927 1131 IL-----KFLQHGTLVGLLP-------VPHPILIRKYQANSGTTTWFRTYMWGVIYLRNV-------------------- 1178 (1196)
Q Consensus 1131 il-----~fL~~~tlvgllP-------vP~Pi~iRkfewn~~t~~Wf~SllWG~Ifl~~~-------------------- 1178 (1196)
|+ +|+++++++|++| +||||++|+||||+++++||+|||||+||.++|
T Consensus 777 il~~~~~~~l~~~tl~~lLp~~~~~~~~p~Pi~ir~f~wn~~sl~Wy~SllWg~If~s~~~v~~~s~~~~~~~~~~s~s~ 856 (895)
T PF12722_consen 777 ILVQSIFKFLFHGTLVGLLPIYNYDLPEPHPIRIRKFQWNPLSLGWYESLLWGVIFNSNSQVSSASGSNNNIMKNNSSSN 856 (895)
T ss_pred HHHhhhhhhhhHHHHHhhccccccccCCCCCceeecCCCCHHHHHHHHHHHHHHHhcccchhhccccccccccccccccc
Confidence 98 9999999999999 999999999999999999999999999999999
Q ss_pred ------------------------CCCCccCCceeEEEE
Q psy8927 1179 ------------------------DPPIWYDTDVKLFEI 1193 (1196)
Q Consensus 1179 ------------------------~p~iW~~T~VkLF~v 1193 (1196)
+||||+||+||||+|
T Consensus 857 ~~~S~f~~sW~~f~~~~~~~v~l~~~niW~gT~IkLF~V 895 (895)
T PF12722_consen 857 SSFSFFKFSWSGFSQNSSTSVDLGTPNIWNGTDIKLFKV 895 (895)
T ss_pred cccceeeccccCCcccccccccCCCCCcCCCceeeeeeC
Confidence 899999999999997
No 2
>KOG2226|consensus
Probab=100.00 E-value=3.6e-163 Score=1397.65 Aligned_cols=755 Identities=48% Similarity=0.780 Sum_probs=606.8
Q ss_pred CCCchhhhHHHHHHHHhhcCCccCCCCChhhHHhhccCCCCChhhhcccCChHHHHHHHhhCcchHHHHHHHHHHHHHHh
Q psy8927 1 MGNSDTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNA 80 (1196)
Q Consensus 1 MG~sdsKL~Fr~~v~~L~~~~~~I~~~Dd~fW~~fW~~~p~sa~DVF~Lisp~dIR~~Rd~~p~NlaTLi~~~v~rL~~~ 80 (1196)
||++||||+||++|.||+|+. | |.||.||+|+|+ .|+|.+|||++|++.|||++||++|+||||||+++|+||+++
T Consensus 1 MGsqeSKl~Fr~aIlrl~q~~--~-p~ddeiWe~lWt-~peT~~dVF~~i~~~dIR~~RD~ap~NLatLl~v~v~kL~~l 76 (786)
T KOG2226|consen 1 MGSQESKLDFRHAILRLTQKN--I-PEDDEIWEQLWT-CPETENDVFAFISAQDIRKCRDNAPDNLATLLYVLVEKLVSL 76 (786)
T ss_pred CCcccccchHHHHHHHHhcCC--C-CcHHHHHHHHhc-CCCcchHHHHhcCHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999754 4 678999999999 899999999999999999999999999999999999999999
Q ss_pred hcCc-CCCccccchhhhhHHhhhhccccccc---cccccccccccccC-CCCC------------------C----CCCC
Q psy8927 81 VDSS-CRMAHEQQAVLNCTRLLTRLIPYIFE---DMDWRGFFWSSLPS-KSTS------------------D----ENEG 133 (1196)
Q Consensus 81 ~~~~-~~~~~~~~~~LNCiRlLTRiLP~ifE---~~~w~~fFWs~~~~-~~~~------------------~----~~~~ 133 (1196)
.+.. ++.+.++++||||||+|||++||||| +++|+++||++.|+ +|.. + .-..
T Consensus 77 qn~~~~p~~~~~~~aLNciRLLTRllPyl~E~~~~~eW~~~Fw~slpk~~d~~~PL~~~llns~~dLlf~~dfTi~~~~~ 156 (786)
T KOG2226|consen 77 QNKFSEPATAKQKCALNCIRLLTRLLPYLFESTNDEEWRDYFWWSLPKTVDDLKPLAASLLNSFSDLLFLPDFTITLCFQ 156 (786)
T ss_pred hhccCCCCCcchHHHHHHHHHHHHHHHHHhccccHHHHHHHhhhcCcCCCCccCchhHHHHHHHhhhhhccccchhhhhh
Confidence 9976 67778888999999999999999999 77999999999884 3321 0 0113
Q ss_pred CCCCCcccCCCcccccccccCCcccCCCCCCCchhhhhhHHHHHHHHHhhcccccCCCCCCCCccchhhhcc-ccccccc
Q psy8927 134 EGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWS-ENVTNAQ 212 (1196)
Q Consensus 134 ~~~~~~e~l~~ids~~~IWe~GVG~~~~~~~n~~~dsNR~EVLrLLLTl~Se~mY~~p~~~~D~~fW~qfW~-e~~~sa~ 212 (1196)
.++++.+++++||+|+||||+|||++..++.+..++.||+||||||||||||+||-. .|..+..-|.-+.+ .+.+.+.
T Consensus 157 ~~~~~~k~~~siesC~~IWEaGVg~~et~~~~~~~~~~R~EvLrLLL~lfSe~lY~r-sdE~~ss~~~~~~s~ank~lvL 235 (786)
T KOG2226|consen 157 HNFTKIKELSSIESCEYIWEAGVGIPETPPKPAYDERHRTEVLRLLLVLFSETLYDR-SDELDSSVLNYIFSSANKRLVL 235 (786)
T ss_pred cCcchhhhhcchhHHHHHHhcccCCCCCCCCchHHHHHHHHHHHHHHHHhhHHHHhc-ccccCceeEEEEEEecCCceee
Confidence 456678899999999999999999999999999999999999999999999999973 34456667888887 4448899
Q ss_pred cccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhcCCcccchhhhhhhhhHHhhhccccccccccccccccccccCCC
Q psy8927 213 DIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPS 292 (1196)
Q Consensus 213 DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~dp~~~~~~~~~~vLNCiRlLTRvLPyifE~~~w~~fFWs~~p~ 292 (1196)
.+|+ |.+||.| .+|| .++..||.+. .
T Consensus 236 ~ll~---------------SliNT~~---------~~~p-----------------~~~~~~yn~l-----------~-- 261 (786)
T KOG2226|consen 236 PLLT---------------SLINTVC---------RYDP-----------------VGWKNSYNQL-----------L-- 261 (786)
T ss_pred hhhH---------------Hhhhhhe---------eccc-----------------cccccccccc-----------c--
Confidence 9999 9999999 8999 8899999876 2
Q ss_pred CCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhhhcCCCCccccCCcchhhhhhhhcCCCCccccccccccccchhhHhhh
Q psy8927 293 KSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLA 372 (1196)
Q Consensus 293 ~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~DLLFcpgFTv~~~~c~~q~l~~~l~~~~~~~~~~~~~hRtEdLkllLT 372 (1196)
++|..+ ||+|.+ +|++++++++.....+..
T Consensus 262 --~sds~~-------------sLve~~---------------------~qiLli~lDh~~~e~t~~-------------- 291 (786)
T KOG2226|consen 262 --NSDSLE-------------SLVEYC---------------------LQILLILLDHRIKENTHL-------------- 291 (786)
T ss_pred --ccchhh-------------hHHHHH---------------------HHHHHHhhccccccCcee--------------
Confidence 455555 999999 999999999875443332
Q ss_pred cccccccCCCCcccccccccCCCCCchhhhhhhcccCccchhhhHHHHHHhhcccccccccCCCcchhhhhhhhhhhhhh
Q psy8927 373 GFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWK 452 (1196)
Q Consensus 373 gfSe~~~~p~~~~~~~~~~~~~~~~N~~~~~l~~lhr~~df~fiL~g~trLLn~pL~~s~lp~~~~~~~~~q~liv~l~~ 452 (1196)
|+.+..+. .+..+|+|++|++|+||.+||+||++||+||||||++++
T Consensus 292 -----y~~~r~s~-------g~~~kN~f~~ylSrlhr~~DF~fil~gi~RLL~nPl~s~--------------------- 338 (786)
T KOG2226|consen 292 -----YQNGRSSE-------GQHIKNYFINYLSRLHRTEDFLFILKGITRLLSNPLKSE--------------------- 338 (786)
T ss_pred -----ccCCcCCC-------ccchhhHHHHHHHHhccchhHHHHHHHHHHHhcchhhcc---------------------
Confidence 22221111 246899999999999999999999999999999998643
Q ss_pred hcccccchhhhccchhcccCcccccccCCCccccchhhHHHHHHHHhhccchhhhhhhhccCccchhhhhhhhhcccccc
Q psy8927 453 MCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRA 532 (1196)
Q Consensus 453 ~~~~~~~~~~l~g~~rll~npl~qtYLP~S~Kki~~hqElLvLfWk~~d~n~~f~~~vl~s~~~~d~~v~~l~~~~~~r~ 532 (1196)
..|+|+|+|...||||+|+|+|++|+|||||++|++++++|+|++++||||.++||+
T Consensus 339 -----------------------s~yi~~s~k~~~~~~E~Liflw~~i~yNkrF~~~li~t~~a~d~li~iLy~~~~yr~ 395 (786)
T KOG2226|consen 339 -----------------------SQYIPNSTKRKRCHPELLIFLWLLITYNKRFTDYLIKTSDALDILIPILYHHVKYRG 395 (786)
T ss_pred -----------------------cccccccchhhhhhHHHHHHHHHHHhccHHHHHHHhcCccHHHHHHHHHHHHHHhcC
Confidence 138888899999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhhHHHHHHHHHHhhhccccccchhhhhhhccccccccccccccchhhhhHhhhhccccccccccCCCCCc
Q psy8927 533 DQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSA 612 (1196)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~s~~~~f~~~l~~~~~~ 612 (1196)
|+
T Consensus 396 D~------------------------------------------------------------------------------ 397 (786)
T KOG2226|consen 396 DT------------------------------------------------------------------------------ 397 (786)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 88
Q ss_pred ccCCcccccccccccccccccccchhhhhHhhhhccccccccccCCCCCCCCCCCcccccccchhhhhhhhHHHHHhhcc
Q psy8927 613 AVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKS 692 (1196)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 692 (1196)
T Consensus 398 -------------------------------------------------------------------------------- 397 (786)
T KOG2226|consen 398 -------------------------------------------------------------------------------- 397 (786)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhHhHHhhcccccccccccchhhhHHHHHHhhccccccccccCcCccCCCCcccCCccccccchhhhhhhhhhcc
Q psy8927 693 SDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITS 772 (1196)
Q Consensus 693 ~~~~~~l~~~l~~~~~~r~~~sk~GLvricvFILq~LS~ErnFGv~LNKpf~~~~pi~ip~f~GTyADfLIisi~~LItt 772 (1196)
++.|++|||+|||+.|||||+||+||||+|++..+|.+|+++||||||+|+++|++|++
T Consensus 398 ---------------------~~~gl~~l~vfil~~Ls~Ek~f~~rLNk~~sl~~sl~vp~~~gt~AdllIi~~~~li~~ 456 (786)
T KOG2226|consen 398 ---------------------ERSGLSHLCVFILLLLSGEKNFCKRLNKAYSLDKSLIVPVPTGTYADLLIIVIHKLIAY 456 (786)
T ss_pred ---------------------cccchHHHHHHHHHHHhhhHHHHHHhcccccccccCCCCCCCCcccceeEeehhhhhhh
Confidence 77799999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCccccchhhhHhhhcchHhhhhccHHHHHHHHHHHHhhcCccccccCCCCchhHHHHHHHhhhhhcccccCchhhhh
Q psy8927 773 GHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKT 852 (1196)
Q Consensus 773 ~~~rL~~ly~~LLtIL~NiSPY~k~LS~~assKLl~Lf~sfSsP~FL~~~~~n~~ll~~ll~~~~~ii~~~~~~~p~~~~ 852 (1196)
|++++++|+||+|+|||||+||+|+|||+||+||+||+++||+||||
T Consensus 457 ~~~~~s~l~~~ll~ii~Ni~py~~nLs~v~a~kl~eL~ss~S~P~FL--------------------------------- 503 (786)
T KOG2226|consen 457 GKDRLSELFDCLLTIICNISPYIKNLSMVAASKLVELISSFSTPWFL--------------------------------- 503 (786)
T ss_pred cccccchHHHHHHHHHHhhhhhhcccchhhhHHHHHHHHHhcCchhh---------------------------------
Confidence 99999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcCCcccccCCCChhhHHHHHHHHHHHhhhccCCCcchhhHhhhhccccccccCCCCChHHHHHh
Q psy8927 853 LSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSDSASIHRA 932 (1196)
Q Consensus 853 ls~~~~~~l~~l~~~~ssp~fllane~Nh~LL~~LLE~fNnIIqyQf~~N~nLVYaIiR~r~~F~~L~~l~s~~~eI~r~ 932 (1196)
|+|++||++|+||||+|||||||||+||+||+|+|||+|++|+++++++.+...+.|.
T Consensus 504 ----------------------~snp~Nh~ll~~LL~afnniiqy~F~~N~nLiY~iir~k~vF~~l~als~da~~~~k~ 561 (786)
T KOG2226|consen 504 ----------------------FSNPQNHSLLKYLLEAFNNIIQYQFDGNSNLIYTIIRKKRVFEALSALSTDAASIAKV 561 (786)
T ss_pred ----------------------ccCCCcHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHhhcCchhHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999888887
Q ss_pred hcccCCCcCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCcccccccCccccccccCC
Q psy8927 933 LSVSGGRKRSSPL-PPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGV 1011 (1196)
Q Consensus 933 ~~~~~~rr~~~~~-~~~~~s~~ss~s~~~~~~~~s~~~s~~~~~~e~~~~~~~l~~~~g~d~~~e~~~~~~~~~~~~~~~ 1011 (1196)
.. .|+..+. +..+.++.... ...++...+..+.+.++++ +++++.+|++.++ .|.
T Consensus 562 ~S----~~~~~s~~~~~~vsqa~~~---~~l~~lp~~~~~~~~~~~~----------ed~sp~~e~D~~s-------~~f 617 (786)
T KOG2226|consen 562 LS----GRASQSANDNGFVSQAGDD---ILLEQLPYEKWPHELNYYP----------EDSSPVTEKDEIS-------DGF 617 (786)
T ss_pred cc----chhhccccCCcccccccCc---hhhccCccccCCccCCCCc----------cccCccchhhhcc-------ccc
Confidence 66 2222211 11122111000 0000111111111111111 0111111111111 011
Q ss_pred CCCCCCCCC-CCCcchhHHHHHhh-hcccccccCCCCcccccccccccCCCCCCCcccccCCCCCCCCcccCCCCccccC
Q psy8927 1012 GFATSPARC-PAHESARTELLKLL-LTCFSETIYQPPQGIEKMTEKESAHPGGENENVVAKPSSISSPIQHSHPRVWTPT 1089 (1196)
Q Consensus 1012 ~~~~sp~~~-~s~~s~~~~~~~~~-~~~~se~~~s~p~~~~~m~e~~~~~~~~~~~~s~~~~~~~s~~~~~~~~~~F~PT 1089 (1196)
+++.+.++- +.++..++..++.. ....+. +| ..-+|+.+..+ .+.+ ....++|..++.++.|.||
T Consensus 618 s~~~s~~gl~~~dsr~vq~~~~~~~q~~~~d---tP--~vt~~~~Rdvs-------~~d~-~~~~t~P~~~~~~~~w~pt 684 (786)
T KOG2226|consen 618 SKALSSNGLIHLDSRCVQPLTPKNPQTELAD---TP--NVTSMTYRDVS-------LEDT-ERTYTSPIAHSADNRWNPT 684 (786)
T ss_pred hhhhcccCccccccccccccCCCCcccccCC---Cc--hHHhhcccccC-------hhhc-cccccCccccccccccCCc
Confidence 111111100 01111111100000 000000 00 11122221100 1111 1124456778889999999
Q ss_pred hhHHHhhhcCCChHHHHHHHHHhhhhhHHHhhhcCCCCHHHHHHHhhccccccccCCCCCccccccccCcchhhHHHHHh
Q psy8927 1090 PEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYM 1169 (1196)
Q Consensus 1090 ~eWv~SW~~~LPL~TIl~lIq~L~PqVe~~c~~kg~tde~eil~fL~~~tlvgllPvP~Pi~iRkfewn~~t~~Wf~Sll 1169 (1196)
++|..+||++|||+|||+++|.++|+++++|+++|.|| ||+++|||++++|++|||| +|+||||+++..||++|+
T Consensus 685 ~eW~nsW~s~L~L~til~i~q~~lp~vkk~~~~~~~td--e~~kiLq~~~L~~~~PvP~---~R~f~w~~~~~nwfr~~~ 759 (786)
T KOG2226|consen 685 NEWRNSWKSKLPLQTILRILQVSLPQVKKICIDKGLTD--EILKILQHGTLVGLQPVPH---IRLFQWNQGTNNWFRLYA 759 (786)
T ss_pred HHHHHHhhccCcHHHHHHHHHhhhhHHhhhhcccCCCH--HHHHHHhcCCccccCCCcc---eeeeeeccchhHHHHHHH
Confidence 99999999999999999999999999999999999988 8999999999999999999 899999999999999999
Q ss_pred HHhhhhcCCCCCCccCCceeEEEEeeC
Q psy8927 1170 WGVIYLRNVDPPIWYDTDVKLFEIQRV 1196 (1196)
Q Consensus 1170 WG~Ifl~~~~p~iW~~T~VkLF~vq~~ 1196 (1196)
||+||+++.+|||||||+||||++||+
T Consensus 760 W~v~~~k~~~p~I~~~tdvk~fe~~~~ 786 (786)
T KOG2226|consen 760 WGVIYLKNEGPGIWYDTDVKLFESQRS 786 (786)
T ss_pred HHHHHHhccCCCcccccceeeeecccC
Confidence 999999999999999999999999985
No 3
>PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs. It is characteristically about 700 residues long and present in plants and animals. In humans, mutations in the gene coding for this protein give rise to a disorder called Dyggve-Melchior-Clausen syndrome (DMC, MIM 223800), which is an autosomal-recessive disorder characterised by the association of spondylo-epi-metaphyseal dysplasia and mental retardation []. This entry also includes Hid1 (high-temperature-induced dauer-formation protein 1) from Caenorhabditis elegans which encodes a novel highly conserved putative transmembrane protein expressed in neurons []. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally this protein might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor [].
Probab=100.00 E-value=6.1e-71 Score=667.22 Aligned_cols=622 Identities=32% Similarity=0.462 Sum_probs=485.0
Q ss_pred CCCchh---hhHHHHHHHHhhcCCccCCCCChhhHHhhcc---CCCCChhhhcccCChHHHHHHHhhCcchHHHHHHHHH
Q psy8927 1 MGNSDT---KLNFRQAVIQLTSKTQPIDASDNTFWNQFWS---ENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAV 74 (1196)
Q Consensus 1 MG~sds---KL~Fr~~v~~L~~~~~~I~~~Dd~fW~~fW~---~~p~sa~DVF~Lisp~dIR~~Rd~~p~NlaTLi~~~v 74 (1196)
||++.| |+.|++++.++.. +++|+++||+||+|||+ ..|++++|.|+++..+.++..|+-.+.|++|...+..
T Consensus 1 MGa~~S~~~~l~~~~~l~~l~g-~~~i~~~~d~FW~qLlsf~~~~p~~s~d~~~ll~~~~~~~~~~L~~nN~~Tgn~~~L 79 (678)
T PF09742_consen 1 MGASSSKEAKLSFNEALKRLVG-EQPIPPDDDPFWNQLLSFSISPPTSSEDQFELLEEALEPLCQSLVPNNLATGNFRAL 79 (678)
T ss_pred CCCCcCCcccchhHHHHHHhcC-CCCCCCcchHHHHHHHcccCCCCCChHHHHHHhHHHHHHHHHhhcccCccccCHHHH
Confidence 999999 9999999888876 67998899999999996 5789999999999999999999999999999887777
Q ss_pred HHHHHhhcCcCCCccccchhhhhHHhhhhccccccc---cccccccccccccCCCC-----------CCCCC-------C
Q psy8927 75 EKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFE---DMDWRGFFWSSLPSKST-----------SDENE-------G 133 (1196)
Q Consensus 75 ~rL~~~~~~~~~~~~~~~~~LNCiRlLTRiLP~ifE---~~~w~~fFWs~~~~~~~-----------~~~~~-------~ 133 (1196)
.|++..+...+....+++.++||+|+|++++||++| +++|.++||...+.+.. .+... +
T Consensus 80 i~~~l~~~~el~~s~~~~~~~Nal~ilr~~lkyliE~~se~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (678)
T PF09742_consen 80 IRVFLSRLSELKASSECQDAINALFILRRFLKYLIENGSEEELLGHFWHPDPSEGSRPLASSLFSALSDLLFCPDFTVMS 159 (678)
T ss_pred HHHHHHHHhhhhcccchhHHHHHHHHHHHHHHHHhhcCCHHHHHHHHhcCCCcccccccccchhhhhcccccccchhhhc
Confidence 777777777777766665699999999999999999 56899999987766210 00000 0
Q ss_pred CCCCCcccCCCcccccccccCCcccCCCCCCCchhhhhhHHHHHHHHHhhcccccCCCCCCCCccchhhhcc-ccccccc
Q psy8927 134 EGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWS-ENVTNAQ 212 (1196)
Q Consensus 134 ~~~~~~e~l~~ids~~~IWe~GVG~~~~~~~n~~~dsNR~EVLrLLLTl~Se~mY~~p~~~~D~~fW~qfW~-e~~~sa~ 212 (1196)
...+..+++...|.++.+|++|||+....|.+...+.+|.|++++||+|+|..||.+++... ..-|..+.. ...+.+.
T Consensus 160 ~~~~~~~~~~~~~~~e~l~~alv~~i~~~p~~~~t~~lh~E~l~lLLvllS~qLy~~~~~~~-~~~~~~~~~~~~s~~a~ 238 (678)
T PF09742_consen 160 KSEEGSESLSSEDSAEYLLEALVGFIVSVPVNDATYALHLEALNLLLVLLSSQLYHPPSSEQ-SSPFLDSLMSSCSPHAS 238 (678)
T ss_pred cccccccccccccHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcccc-ccHHHHHHHHhhhhhHH
Confidence 00123456666788999999999999999999999999999999999999999999998743 444555444 2224444
Q ss_pred cccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhcCCcccchhhhhhhhhHHhhhcccccccccccc----ccccccc
Q psy8927 213 DIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMD----WRGFFWS 288 (1196)
Q Consensus 213 DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~dp~~~~~~~~~~vLNCiRlLTRvLPyifE~~~----w~~fFWs 288 (1196)
.+++ +.|.+.| ..+|.+. + -+..++.--..++ -...+|+
T Consensus 239 ~l~~---------------sLL~~~~---------~~~~~~~--~-----------~~~~l~~~~~~~s~l~gi~s~~~s 281 (678)
T PF09742_consen 239 ALVR---------------SLLNNFI---------RQDPVPP--P-----------YTHLLFSDGSQGSILYGIASASWS 281 (678)
T ss_pred HHHH---------------HHHHHHH---------hcCCccc--c-----------cccccccCCCCchHHHHHHHHHHH
Confidence 4444 5555555 4443221 0 0001111000000 0011222
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhhhcCCCCccccCCcchhhhhhhhcCCCCccccccccccccchhh
Q psy8927 289 SLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQ 368 (1196)
Q Consensus 289 ~~p~~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~DLLFcpgFTv~~~~c~~q~l~~~l~~~~~~~~~~~~~hRtEdLk 368 (1196)
-... +.... .........|||+.. .+.++++..+..+..
T Consensus 282 ~l~~--~~~~~-----~~~~~~~~~pLa~~S---------------------llLLLvL~~~~~~~~------------- 320 (678)
T PF09742_consen 282 LLDN--FYGSS-----PSSSEESRSPLANQS---------------------LLLLLVLVNHCSPPS------------- 320 (678)
T ss_pred Hhhc--ccccc-----ccCcccCcCCHHHHH---------------------HHHHHHHHcCCCccc-------------
Confidence 1100 00000 001112234899888 888888877653211
Q ss_pred HhhhcccccccCCCCcccccccccCCCCCchhhhhhhcccCccc--hhhhHHHHHHhhcccccccccCCCcchhhhhhhh
Q psy8927 369 FVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDED--FQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQEL 446 (1196)
Q Consensus 369 llLTgfSe~~~~p~~~~~~~~~~~~~~~~N~~~~~l~~lhr~~d--f~fiL~g~trLLn~pL~~s~lp~~~~~~~~~q~l 446 (1196)
...|-|+.++..+.+.++ +++.+.++.+.....
T Consensus 321 --------------------------~~~Np~r~al~~~~d~~~~~~~~~~~~~~~~~~~~------------------- 355 (678)
T PF09742_consen 321 --------------------------SKGNPYREALFSFSDIQDEDFDFDSSGISSSLVNS------------------- 355 (678)
T ss_pred --------------------------cCCChHHHHHHhhhcchhccccccccccccccccc-------------------
Confidence 134566666555555543 555555544444321
Q ss_pred hhhhhhhcccccchhhhccchhcccCcccccccCCCccccchhhHHHHHHHHhhccchhhhhhhhccCccchhhhhhhhh
Q psy8927 447 LVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYH 526 (1196)
Q Consensus 447 iv~l~~~~~~~~~~~~l~g~~rll~npl~qtYLP~S~Kki~~hqElLvLfWk~~d~n~~f~~~vl~s~~~~d~~v~~l~~ 526 (1196)
+++.++||+++.++..+++|.++|+|++|+.|++|+.||+..+|+.++++|||.+
T Consensus 356 -------------------------~~i~f~~L~~s~~~~~~~~~~~lLLY~LL~~N~~F~~~vls~~d~~~lv~piL~~ 410 (678)
T PF09742_consen 356 -------------------------FKINFTALYNSLCKSLSHDELLLLLYKLLHRNPNFLNYVLSRSDLDNLVLPILQI 410 (678)
T ss_pred -------------------------eeecHHHHHHHHHHhhCCcchHHHHHHHHhcCHHHHHHHhcchhHHHHHHHHHHH
Confidence 4555788999999999999999999999999999998888777666777777766
Q ss_pred cccccccccccccchhhhHHHHHHHHHHhhhccccccchhhhhhhccccccccccccccchhhhhHhhhhcccccccccc
Q psy8927 527 LNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRL 606 (1196)
Q Consensus 527 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~s~~~~f~~~l 606 (1196)
+++.|.|+
T Consensus 411 ly~~~~~~------------------------------------------------------------------------ 418 (678)
T PF09742_consen 411 LYDAREDF------------------------------------------------------------------------ 418 (678)
T ss_pred HHhccccC------------------------------------------------------------------------
Confidence 66666643
Q ss_pred CCCCCcccCCcccccccccccccccccccchhhhhHhhhhccccccccccCCCCCCCCCCCcccccccchhhhhhhhHHH
Q psy8927 607 NKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFL 686 (1196)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 686 (1196)
T Consensus 419 -------------------------------------------------------------------------------- 418 (678)
T PF09742_consen 419 -------------------------------------------------------------------------------- 418 (678)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccccchhhhHhHHhhcccccccccccchhhhHHHHHHhhccccccccccCcCccCCCC--cccCCccccccchhhh
Q psy8927 687 YYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVP--MDIPVFTGTHADLLMI 764 (1196)
Q Consensus 687 ~~~~~~~~~~~~l~~~l~~~~~~r~~~sk~GLvricvFILq~LS~ErnFGv~LNKpf~~~~p--i~ip~f~GTyADfLIi 764 (1196)
++.|+++||+|||+.||.+++||+++|+++...+| .+-+.+++|++|++|+
T Consensus 419 ---------------------------~~~~~~~m~l~iLLiLSqd~~f~~~~~~~~~~~~~w~~er~~~~~Slg~Llvl 471 (678)
T PF09742_consen 419 ---------------------------SNSHHIYMALIILLILSQDDSFNRSLHETIIKNVPWYTERSLFEISLGSLLVL 471 (678)
T ss_pred ---------------------------CCCcchHHHHHHHHHHcCchHHHHHhhhcccCCCCccccccccccCHHHHHHH
Confidence 66699999999999999999999999999988888 7888899999999999
Q ss_pred hhhhhhccCcCCcc--ccchhhhHhhhcchHhhhhccHHHHHHHHHHHHhhcCccccccCCCCchhHHHHHHHhhhhhcc
Q psy8927 765 VFHKVITSGHNRLQ--PLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQY 842 (1196)
Q Consensus 765 si~~LItt~~~rL~--~ly~~LLtIL~NiSPY~k~LS~~assKLl~Lf~sfSsP~FL~~~~~n~~ll~~ll~~~~~ii~~ 842 (1196)
++++.|..+..|+. ++++|+|++|+|+|||+|+|++.||.||++||+.+++++|.
T Consensus 472 vl~r~i~~n~~~~~d~~L~~~~la~LaN~sp~~~~l~~y~aqrLv~L~~~ls~~~~~----------------------- 528 (678)
T PF09742_consen 472 VLIRTIQYNLSRLRDEYLHTNCLAILANMSPYFKSLHPYAAQRLVSLLELLSKKYFK----------------------- 528 (678)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHhccHhhcCCCHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 99999999988777 99999999999999999999999999999999999999998
Q ss_pred cccCchhhhhhhhHHHHHHHHHHhhhcCCcccccCCCChhh----------------HHHHHHHHHHHhhhccCCCcchh
Q psy8927 843 QFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHL----------------VFFLLEIFNNIIQYQFDGNSNLV 906 (1196)
Q Consensus 843 ~~~~~p~~~~ls~~~~~~l~~l~~~~ssp~fllane~Nh~L----------------L~~LLE~fNnIIqyQf~~N~nLV 906 (1196)
+++..|++. ++.|||+||++|+||+.+|||||
T Consensus 529 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~lr~lleiins~L~~~l~~N~~Lv 576 (678)
T PF09742_consen 529 --------------------------------LSSQANHSSGSSRTSDDDLQVLEEVLRLLLEIINSILTYQLRHNPNLV 576 (678)
T ss_pred --------------------------------HHhhhhccccccccchhhHHHHHHHHHHHHHHHHHHHhcccccCHHHH
Confidence 455555555 99999999999999999999999
Q ss_pred hHhhhhccccccccCCCCChHHHHHhhcccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy8927 907 YTIIRKRQIFYALSNLPSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNATLA 986 (1196)
Q Consensus 907 YaIiR~r~~F~~L~~l~s~~~eI~r~~~~~~~rr~~~~~~~~~~s~~ss~s~~~~~~~~s~~~s~~~~~~e~~~~~~~l~ 986 (1196)
|+|+++|++|+++++++ . .
T Consensus 577 Y~ll~~r~~f~~~~~l~--~-------~---------------------------------------------------- 595 (678)
T PF09742_consen 577 YALLYKREVFEQLRNLD--P-------V---------------------------------------------------- 595 (678)
T ss_pred HHHHHHHHHHHHHHhhc--c-------c----------------------------------------------------
Confidence 99999999999887762 0 0
Q ss_pred CCCCCCCcccccccCccccccccCCCCCCCCCCCCCCcchhHHHHHhhhcccccccCCCCcccccccccccCCCCCCCcc
Q psy8927 987 DTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEKESAHPGGENEN 1066 (1196)
Q Consensus 987 ~~~g~d~~~e~~~~~~~~~~~~~~~~~~~sp~~~~s~~s~~~~~~~~~~~~~se~~~s~p~~~~~m~e~~~~~~~~~~~~ 1066 (1196)
T Consensus 596 -------------------------------------------------------------------------------- 595 (678)
T PF09742_consen 596 -------------------------------------------------------------------------------- 595 (678)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCcccCCCCccccChhHHHhhhcCCChHHHHHHHHHhhhhhHHHhhhcCCCCHHHHHHHhhccccc-cccC
Q psy8927 1067 VVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLV-GLLP 1145 (1196)
Q Consensus 1067 s~~~~~~~s~~~~~~~~~~F~PT~eWv~SW~~~LPL~TIl~lIq~L~PqVe~~c~~kg~tde~eil~fL~~~tlv-gllP 1145 (1196)
. ..+|+.++|+|+|+++|+...++|++.|.++|.++.++|+++|++++.+ +..|
T Consensus 596 -----------~--------------~~~~~~~~~l~ni~~vi~~f~~~v~~~~~~~~~~s~~~vl~~i~~~~~~~~~~~ 650 (678)
T PF09742_consen 596 -----------S--------------IHPWFQDLPLQNIDRVIQFFSSRVESICADKGELSVSEVLEVIRKGTLVWPTDP 650 (678)
T ss_pred -----------h--------------hhHHHHHHHHHhHHHHHHHHHHHHHhccCCcccccHHHHHHHHHHhhhhcCCCC
Confidence 0 0178999999999999999999999999999779999999999999999 9999
Q ss_pred CC-CCccccccccCcchhhHHHHHhHHh
Q psy8927 1146 VP-HPILIRKYQANSGTTTWFRTYMWGV 1172 (1196)
Q Consensus 1146 vP-~Pi~iRkfewn~~t~~Wf~SllWG~ 1172 (1196)
+| +|+++++||-+..+..||..|+||+
T Consensus 651 ~~~~~~l~f~Y~e~~~~~~ff~pyvW~~ 678 (678)
T PF09742_consen 651 LKKFPELKFKYEEEEQPEEFFIPYVWSL 678 (678)
T ss_pred CCCCCCceEEeecCCCcccceeeeeeeC
Confidence 99 9999999999999999999999985
No 4
>KOG2226|consensus
Probab=100.00 E-value=6.9e-53 Score=486.87 Aligned_cols=323 Identities=37% Similarity=0.566 Sum_probs=252.1
Q ss_pred hhhHHHHHHHHHhhcccccCCCCCCCCccchhhhccccccccccccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhc
Q psy8927 170 SARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAV 249 (1196)
Q Consensus 170 sNR~EVLrLLLTl~Se~mY~~p~~~~D~~fW~qfW~e~~~sa~DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~ 249 (1196)
+-|.-||||. ++..+.|+.+|+++|+-+ ++.+|||.++++.|||.+||++|.||+|||+++++||+.+.
T Consensus 9 ~Fr~aIlrl~----------q~~~p~ddeiWe~lWt~p-eT~~dVF~~i~~~dIR~~RD~ap~NLatLl~v~v~kL~~lq 77 (786)
T KOG2226|consen 9 DFRHAILRLT----------QKNIPEDDEIWEQLWTCP-ETENDVFAFISAQDIRKCRDNAPDNLATLLYVLVEKLVSLQ 77 (786)
T ss_pred hHHHHHHHHh----------cCCCCcHHHHHHHHhcCC-CcchHHHHhcCHHHHHHHhhcChHHHHHHHHHHHHHHHHHh
Confidence 4788899982 334456789999999966 89999999999999999999999999999999999999987
Q ss_pred CC-cccchhhhhhhhhHHhhhccccccccc---cccccccccccCCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhh
Q psy8927 250 DS-SCRMAHEQQAVLNCTRLLTRLIPYIFE---DMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICD 325 (1196)
Q Consensus 250 dp-~~~~~~~~~~vLNCiRlLTRvLPyifE---~~~w~~fFWs~~p~~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~D 325 (1196)
+. +++.+.+++++|||||+|||+|||+|| +++|+++||.+.|+. .+...|||..++++.+|
T Consensus 78 n~~~~p~~~~~~~aLNciRLLTRllPyl~E~~~~~eW~~~Fw~slpk~---------------~d~~~PL~~~llns~~d 142 (786)
T KOG2226|consen 78 NKFSEPATAKQKCALNCIRLLTRLLPYLFESTNDEEWRDYFWWSLPKT---------------VDDLKPLAASLLNSFSD 142 (786)
T ss_pred hccCCCCCcchHHHHHHHHHHHHHHHHHhccccHHHHHHHhhhcCcCC---------------CCccCchhHHHHHHHhh
Confidence 63 377888899999999999999999999 889999999887641 12345999999999999
Q ss_pred hcCCCCccccC----C-----------cchhhhhhhhcCCCCccccccccccccchhhHhhhcccccccCCCCccccccc
Q psy8927 326 LLFCPDFTVAS----N-----------KCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALT 390 (1196)
Q Consensus 326 LLFcpgFTv~~----~-----------~c~~q~l~~~l~~~~~~~~~~~~~hRtEdLkllLTgfSe~~~~p~~~~~~~~~ 390 (1196)
||||++||++. + .|+|||++|+|.+++++.+..+..||+|.+|+|++|||+.+++-.++
T Consensus 143 Llf~~dfTi~~~~~~~~~~~k~~~siesC~~IWEaGVg~~et~~~~~~~~~~R~EvLrLLL~lfSe~lY~rsdE------ 216 (786)
T KOG2226|consen 143 LLFLPDFTITLCFQHNFTKIKELSSIESCEYIWEAGVGIPETPPKPAYDERHRTEVLRLLLVLFSETLYDRSDE------ 216 (786)
T ss_pred hhhccccchhhhhhcCcchhhhhcchhHHHHHHhcccCCCCCCCCchHHHHHHHHHHHHHHHHhhHHHHhcccc------
Confidence 99999999982 1 29999999999999998888887899999999999999966642111
Q ss_pred ccCCCCCchhhhhhhcccCccchhhhHHHHHHhhc--------------ccccccccCCCcchhhhhhhhhhhhhhhccc
Q psy8927 391 RHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLN--------------NPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 456 (1196)
Q Consensus 391 ~~~~~~~N~~~~~l~~lhr~~df~fiL~g~trLLn--------------~pL~~s~lp~~~~~~~~~q~liv~l~~~~~~ 456 (1196)
+.+ .-|.-+....+.+++|+.+++++| |++..+.-..+++|.++ |+|||++||+...
T Consensus 217 -------~~s-s~~~~~~s~ank~lvL~ll~SliNT~~~~~p~~~~~~yn~l~~sds~~sLve~~~-qiLli~lDh~~~e 287 (786)
T KOG2226|consen 217 -------LDS-SVLNYIFSSANKRLVLPLLTSLINTVCRYDPVGWKNSYNQLLNSDSLESLVEYCL-QILLILLDHRIKE 287 (786)
T ss_pred -------cCc-eeEEEEEEecCCceeehhhHHhhhhheeccccccccccccccccchhhhHHHHHH-HHHHHhhcccccc
Confidence 110 123345566677999999999999 45555556678888888 9999999988433
Q ss_pred ccchh------------------------------hhccchhcccCcccccccCCCccccchhhHHHHHHHHhhccchhh
Q psy8927 457 NKTLT------------------------------QLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKF 506 (1196)
Q Consensus 457 ~~~~~------------------------------~l~g~~rll~npl~qtYLP~S~Kki~~hqElLvLfWk~~d~n~~f 506 (1196)
+.+.. +++|++|||+||+ ++|
T Consensus 288 ~t~~y~~~r~s~g~~~kN~f~~ylSrlhr~~DF~fil~gi~RLL~nPl--------------~s~--------------- 338 (786)
T KOG2226|consen 288 NTHLYQNGRSSEGQHIKNYFINYLSRLHRTEDFLFILKGITRLLSNPL--------------KSE--------------- 338 (786)
T ss_pred CceeccCCcCCCccchhhHHHHHHHHhccchhHHHHHHHHHHHhcchh--------------hcc---------------
Confidence 32211 5999999999995 122
Q ss_pred hhhhhccCccchhhhhhhhhcccccccccccccchhhhHHHHHHHHHHhhhccccccchhhhhhhcccccc
Q psy8927 507 LYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSR 577 (1196)
Q Consensus 507 ~~~vl~s~~~~d~~v~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (1196)
..|+=.+.+-.+...-+ |.+.--++.|||||++|++|++|++||++|||||.+++|
T Consensus 339 s~yi~~s~k~~~~~~E~---------------Liflw~~i~yNkrF~~~li~t~~a~d~li~iLy~~~~yr 394 (786)
T KOG2226|consen 339 SQYIPNSTKRKRCHPEL---------------LIFLWLLITYNKRFTDYLIKTSDALDILIPILYHHVKYR 394 (786)
T ss_pred cccccccchhhhhhHHH---------------HHHHHHHHhccHHHHHHHhcCccHHHHHHHHHHHHHHhc
Confidence 01111111111111111 122334678999999999999999999999999987764
No 5
>PF12722 Hid1: High-temperature-induced dauer-formation protein
Probab=100.00 E-value=4.5e-47 Score=470.85 Aligned_cols=282 Identities=37% Similarity=0.562 Sum_probs=213.3
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCCcc-chhhhccccccccccccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhc
Q psy8927 171 ARTELLKLLLTCFSETIYQPPQDASDNT-FWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAV 249 (1196)
Q Consensus 171 NR~EVLrLLLTl~Se~mY~~p~~~~D~~-fW~qfW~e~~~sa~DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~ 249 (1196)
-|.-|+||. +. ..++++.|+. ||++||+.+ ++++|||+|++++|||++|++||+|++|||+++++||+.+.
T Consensus 10 fr~~i~~L~-----~~--~~~~~~~dd~~fw~~fw~~~-~s~~Dvf~Li~~~diR~ir~~~~~Nl~tLi~~~~~~l~~~~ 81 (895)
T PF12722_consen 10 FRKHIFKLA-----QE--RIIVDPDDDAFFWDQFWELP-TSAEDVFSLISPADIRRIRDENPENLATLIRKLVERLVQLA 81 (895)
T ss_pred HHHHHHHHc-----CC--CcCCCCcccHHHHHHHHcCC-CCHHHHHhcCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHh
Confidence 677788872 11 2223356666 999999877 99999999999999999999999999999999999999988
Q ss_pred CCccc--chhhhhhhhhHHhhhccccccccc---cccccc-cccccCCCCCCCCC-C----CCCCCCCCCCCCCccHHHH
Q psy8927 250 DSSCR--MAHEQQAVLNCTRLLTRLIPYIFE---DMDWRG-FFWSSLPSKSTSDD-N----EGEGSTPAEDVESVPLAQS 318 (1196)
Q Consensus 250 dp~~~--~~~~~~~vLNCiRlLTRvLPyifE---~~~w~~-fFWs~~p~~~~~d~-~----E~~~~~~~e~~~~~pLae~ 318 (1196)
+..+. ...+.+++|||||+|||+|||+|| +++|++ |||+..+....... . +++.+.+.++....|||++
T Consensus 82 ~~~~~~~~~~~~~~~LNciRiLTRilP~i~E~~~~~~~~~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLg~~ 161 (895)
T PF12722_consen 82 NSPSFPSTPAPKQELLNCIRILTRILPFIFEADYDEEWEEEFFWSSRPKPSRGAQSASEVLFDEASSEEDDEQSPPLGER 161 (895)
T ss_pred cCccccccchhhhHHHHHHHHHHHhhhHhhcccccccchhccccCCCCccccccccccccccccccccccccCCCCHHHH
Confidence 75443 344557999999999999999999 779985 99998754322111 1 1111112334456799999
Q ss_pred HHHHHhhhcCCCCccccCCc-----chh-hhhhhhcCCCCccc-cccccccccchhhHhhhcccc-cccCCC-Ccccccc
Q psy8927 319 LLNAICDLLFCPDFTVASNK-----CTC-QVFLMLGTQDNLFI-NYLSRIHRDEDFQFVLAGFSR-LYQDGN-RTRGLAL 389 (1196)
Q Consensus 319 Ll~aL~DLLFcpgFTv~~~~-----c~~-q~l~~~l~~~~~~~-~~~~~~hRtEdLkllLTgfSe-~~~~p~-~~~~~~~ 389 (1196)
|+++|+|||||+||||+... |+| +|+.|+|..++++. ++.++.||.|.+++|++|+|+ +|.+|. ...+..|
T Consensus 162 Ll~al~dLLF~~gFTv~~~~~~~~~~~~~iWe~GIg~~~~~~~~~~~~dsNR~EvLrLLLtl~S~~lY~~~~~~~~~~~~ 241 (895)
T PF12722_consen 162 LLDALVDLLFCPGFTVPSSSSSPDKVSYSIWEPGIGTNTSPPSPNKEHDSNRTEVLRLLLTLFSEPLYQPPSLSSTGNKF 241 (895)
T ss_pred HHHHHHHHhCCCCCcCCCccCCCCccceeeccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhchhhcCCCccCCCCCee
Confidence 99999999999999998863 777 99999999988877 888899999999999999998 555544 2333344
Q ss_pred cccCCCCCchhhhhhhcccCccchhhhHHHHHHhhcc-----------------cccccccCCCcchhhhhhhhhhhhhh
Q psy8927 390 TRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNN-----------------PLLQTYLPNSTKKIEFHQELLVLFWK 452 (1196)
Q Consensus 390 ~~~~~~~~N~~~~~l~~lhr~~df~fiL~g~trLLn~-----------------pL~~s~lp~~~~~~~~~q~liv~l~~ 452 (1196)
..+.++..| -+.+++.+++|||- ++..+.....+|+.++ |+|+|+|++
T Consensus 242 l~~l~s~~~--------------~~~~l~L~~SLlNt~~~y~p~~~~~~~lpY~~~~~~d~r~~lV~~sl-QlL~vlL~y 306 (895)
T PF12722_consen 242 LTYLVSCTP--------------RQLVLTLLCSLLNTVCRYDPSGNEEWGLPYNHLVFSDSREPLVTYSL-QLLNVLLDY 306 (895)
T ss_pred eeeeccCcc--------------hhhhHHHHHHHHHHHHhcCCCCccccccccccccccCcccHHHHHHH-HHHHHheeC
Confidence 444444333 24499999999991 1223444456777777 999999999
Q ss_pred hcccccch-------------------------------hhhccchhcccCccc
Q psy8927 453 MCDYNKTL-------------------------------TQLAGFSRLLNNPLL 475 (1196)
Q Consensus 453 ~~~~~~~~-------------------------------~~l~g~~rll~npl~ 475 (1196)
........ ++++|++|+|++|+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~N~~r~yl~~lhr~~D~~fi~~gl~~iL~~pl~ 360 (895)
T PF12722_consen 307 PPPSQTNSSFSSETNLTSSKPKNLFRNYLSKLHREEDFQFILDGLTRILNNPLQ 360 (895)
T ss_pred CCCCCCccccccccCcCCCCcchHHHHHHhccCcHHHHHHHHHHHHHHHHhhhh
Confidence 75332111 159999999999975
No 6
>PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs. It is characteristically about 700 residues long and present in plants and animals. In humans, mutations in the gene coding for this protein give rise to a disorder called Dyggve-Melchior-Clausen syndrome (DMC, MIM 223800), which is an autosomal-recessive disorder characterised by the association of spondylo-epi-metaphyseal dysplasia and mental retardation []. This entry also includes Hid1 (high-temperature-induced dauer-formation protein 1) from Caenorhabditis elegans which encodes a novel highly conserved putative transmembrane protein expressed in neurons []. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally this protein might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor [].
Probab=99.78 E-value=5.7e-19 Score=215.67 Aligned_cols=209 Identities=30% Similarity=0.420 Sum_probs=158.0
Q ss_pred CCCCCCCCccchhhhcc---ccccccccccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhcCCcccchhhhhhhhhH
Q psy8927 189 QPPQDASDNTFWNQFWS---ENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNC 265 (1196)
Q Consensus 189 ~~p~~~~D~~fW~qfW~---e~~~sa~DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~dp~~~~~~~~~~vLNC 265 (1196)
..|.++++++||+++|. ....+++|.++++....++..|+-.+.|++|...++..|++......+....++..++||
T Consensus 23 ~~~i~~~~d~FW~qLlsf~~~~p~~s~d~~~ll~~~~~~~~~~L~~nN~~Tgn~~~Li~~~l~~~~el~~s~~~~~~~Na 102 (678)
T PF09742_consen 23 EQPIPPDDDPFWNQLLSFSISPPTSSEDQFELLEEALEPLCQSLVPNNLATGNFRALIRVFLSRLSELKASSECQDAINA 102 (678)
T ss_pred CCCCCCcchHHHHHHHcccCCCCCChHHHHHHhHHHHHHHHHhhcccCccccCHHHHHHHHHHHHhhhhcccchhHHHHH
Confidence 35555677899999997 444899999999999999999999999999965555555554333333333444449999
Q ss_pred Hhhhccccccccc---cccccccccccCCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhhhcCCCCccccC------
Q psy8927 266 TRLLTRLIPYIFE---DMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVAS------ 336 (1196)
Q Consensus 266 iRlLTRvLPyifE---~~~w~~fFWs~~p~~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~DLLFcpgFTv~~------ 336 (1196)
+|++++++||++| +++|.++||...+. ....+++.....++.|++|||+||+..
T Consensus 103 l~ilr~~lkyliE~~se~~l~~~f~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (678)
T PF09742_consen 103 LFILRRFLKYLIENGSEEELLGHFWHPDPS-----------------EGSRPLASSLFSALSDLLFCPDFTVMSKSEEGS 165 (678)
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHhcCCCc-----------------ccccccccchhhhhcccccccchhhhccccccc
Confidence 9999999999999 55788999996532 122389999999999999999998855
Q ss_pred ------CcchhhhhhhhcCCCCccccccccccccchhhHhhhcccccccCCCCcccccccccCCCCCchhhhhhhcccCc
Q psy8927 337 ------NKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRD 410 (1196)
Q Consensus 337 ------~~c~~q~l~~~l~~~~~~~~~~~~~hRtEdLkllLTgfSe~~~~p~~~~~~~~~~~~~~~~N~~~~~l~~lhr~ 410 (1196)
+.|+..|.+++++....+.++.....|.|.++++++++|.-++.+.... +.|.+-.++.+
T Consensus 166 ~~~~~~~~~e~l~~alv~~i~~~p~~~~t~~lh~E~l~lLLvllS~qLy~~~~~~----------~~~~~~~~~~~---- 231 (678)
T PF09742_consen 166 ESLSSEDSAEYLLEALVGFIVSVPVNDATYALHLEALNLLLVLLSSQLYHPPSSE----------QSSPFLDSLMS---- 231 (678)
T ss_pred cccccccHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccc----------cccHHHHHHHH----
Confidence 2488999999998877888877788899999999999997444332111 03333333333
Q ss_pred cchhhhHHHHHHhhcccc
Q psy8927 411 EDFQFVLAGFSRLLNNPL 428 (1196)
Q Consensus 411 ~df~fiL~g~trLLn~pL 428 (1196)
.+.+++...+++||++..
T Consensus 232 ~~s~~a~~l~~sLL~~~~ 249 (678)
T PF09742_consen 232 SCSPHASALVRSLLNNFI 249 (678)
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 677899999999999543
No 7
>KOG2225|consensus
Probab=99.22 E-value=1.4e-11 Score=139.92 Aligned_cols=222 Identities=22% Similarity=0.346 Sum_probs=155.1
Q ss_pred chhhhhhhhHHHHHhhccccchhhhHhHHhhcccccccccccchhhhHHHHHHhhccccccccccCcCccCCCCc--ccC
Q psy8927 675 SINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPM--DIP 752 (1196)
Q Consensus 675 ~~~~~~~~~~f~~~~~~~~~~~~~l~~~l~~~~~~r~~~sk~GLvricvFILq~LS~ErnFGv~LNKpf~~~~pi--~ip 752 (1196)
.|-+||.|.+|+.|++.+.|+-.+++|+|..+.+ +..+..-.|+|..++|+.||-+..|++....---.-+-+ +--
T Consensus 377 LY~LLh~Ns~fr~yvl~r~dlEnLVvPiL~iLy~--a~~~NSHHvYmaLIvlLILsEDdgFnk~iHe~mlKnitWyser~ 454 (695)
T KOG2225|consen 377 LYMLLHANSGFRNYVLSRIDLENLVVPILRILYD--ATSNNSHHVYMALIVLLILSEDDGFNKIIHETMLKNITWYSERS 454 (695)
T ss_pred HHHHHhccccHHHHHHhhccHHHhHHHHHHHHhc--CCcCCccchHHHHHHHHHhcccchhhHHHHHHHHhhccceecce
Confidence 6889999999999999999999999999995444 333334689999999999999999998875432110000 001
Q ss_pred CccccccchhhhhhhhhhccCcCCcc--ccchhhhHhhhcchHhhhhccHHHHHHHHHHHHhhcCccccccCCCCchhHH
Q psy8927 753 VFTGTHADLLMIVFHKVITSGHNRLQ--PLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVF 830 (1196)
Q Consensus 753 ~f~GTyADfLIisi~~LItt~~~rL~--~ly~~LLtIL~NiSPY~k~LS~~assKLl~Lf~sfSsP~FL~~~~~n~~ll~ 830 (1196)
+-.-+.+-+||.+.-+-|..+--|-. -+-.-.|+.++|+|.+.++|-..+|.||+.||+.++... .|++.
T Consensus 455 v~EISLGglliLvviRtIQyNmlktRDkYLHTNCLAALANMSa~Fr~LhpyvaQRliSLf~lLtkkH--------~k~~~ 526 (695)
T KOG2225|consen 455 VREISLGGLLILVVIRTIQYNMLKTRDKYLHTNCLAALANMSAFFRNLHPYVAQRLISLFDLLTKKH--------AKMVD 526 (695)
T ss_pred eeeeeccceeeeeeHHHHHHHHHHhHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHHHHHHH--------HHHHH
Confidence 11234567788877776765532222 233456899999999999999999999999999877642 23444
Q ss_pred HHHHHhhhhhcccccCch--hhhhhhhHHHHHHHHHHhhhcCCcccccCCCChhhHHHHHHHHHHHhhhccCCCcchhhH
Q psy8927 831 FLLEIFNNIIQYQFDVSP--YLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYT 908 (1196)
Q Consensus 831 ~ll~~~~~ii~~~~~~~p--~~~~ls~~~~~~l~~l~~~~ssp~fllane~Nh~LL~~LLE~fNnIIqyQf~~N~nLVYa 908 (1196)
-|-+.--|-|.--...-| |.++++-.. -.++-|||++|+-+..+.-.||||||+
T Consensus 527 q~~~s~~~~v~~nvst~P~d~~qDl~vlE------------------------EviRm~LEIiNScLtn~L~hnpnLvY~ 582 (695)
T KOG2225|consen 527 QMRVSSQNDVADNVSTQPIDFHQDLTVLE------------------------EVIRMLLEIINSCLTNGLRHNPNLVYN 582 (695)
T ss_pred HhhcccccccccCCCCCchhhHhhHHHHH------------------------HHHHHHHHHHHHHhhCccccCchHHHH
Confidence 333332222221111111 222222111 356789999999999999999999999
Q ss_pred hhhhccccccccCCCCChHHHH
Q psy8927 909 IIRKRQIFYALSNLPSDSASIH 930 (1196)
Q Consensus 909 IiR~r~~F~~L~~l~s~~~eI~ 930 (1196)
.+-+|..|++-++-|.=|.-++
T Consensus 583 LLYkR~lFe~fr~Hp~FQD~lq 604 (695)
T KOG2225|consen 583 LLYKRALFEAFRQHPMFQDLLQ 604 (695)
T ss_pred HHHHHHHHHHHhhChhHHHHHH
Confidence 9999999999999775554443
No 8
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []. CAS is involved in both cellular apoptosis and proliferation [, ]. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle [], as is the protein MEK, which is thought to regulate the intracellular localization (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway []. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins []. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins []. This entry represents the C-terminal portion of these proteins. Structural studies of the yeast CSE1 protein indicate that this domain binds to both the transport-orchestrating protein RanGTP and the cargo molecule that is being exported [].; GO: 0005515 protein binding; PDB: 1Z3H_B 1WA5_C.
Probab=37.84 E-value=74 Score=38.88 Aligned_cols=94 Identities=18% Similarity=0.372 Sum_probs=56.5
Q ss_pred hcchHhhhhccHHHHHHHHHHHHhhcCccccccCCCCchhHHHHHHHhhhhhcccccCchhhhhhhhHHHHHHHHHHhhh
Q psy8927 789 VNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAF 868 (1196)
Q Consensus 789 ~NiSPY~k~LS~~assKLl~Lf~sfSsP~FL~~~~~n~~ll~~ll~~~~~ii~~~~~~~p~~~~ls~~~~~~l~~l~~~~ 868 (1196)
.+++|+++.| |-+||..+..|.= ..|..+.+.+.-.++- .+-...|+.. .-.++|.+++...
T Consensus 18 ~di~p~~~~l-------l~~Lf~~i~~~~s----~ENeylMk~iMRvl~~---~~e~~~p~~~----~il~~L~~il~~v 79 (435)
T PF03378_consen 18 ADIQPFAQQL-------LQNLFALIEKPGS----AENEYLMKCIMRVLSV---LQEDILPIAV----EILQHLTAILKEV 79 (435)
T ss_dssp GGTTCCHHHH-------HHHHHHHHHTT-S----TC-HHHHHHHHHHHHH---STTTTGGGHH----HHHHHHHHHHHHH
T ss_pred HHhhhhHHHH-------HHHHHHHHhcCCC----ccchHHHHHHHHHHHH---hHHHHHHHHH----HHHHHHHHHHHHH
Confidence 3566665544 5577777766522 3455444444443322 2555567644 4455666666655
Q ss_pred cCCcccccCCCChhhHHHHHHHHHHHhhhccCCCcchh
Q psy8927 869 ASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLV 906 (1196)
Q Consensus 869 ssp~fllane~Nh~LL~~LLE~fNnIIqyQf~~N~nLV 906 (1196)
| .||+|++.-+||-|++..+|.+.-+.|+..|
T Consensus 80 ~------kNPsnP~FnHylFEsi~~lir~~~~~~~~~v 111 (435)
T PF03378_consen 80 S------KNPSNPRFNHYLFESIGALIRFVCEADPEAV 111 (435)
T ss_dssp H------TS---HHHHHHHHHHHHHHHHHS-GGGHH--
T ss_pred H------hCCCCcchhhhHHHHHHHHHHhccCCChhHH
Confidence 4 4899999999999999999999888888744
No 9
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []. CAS is involved in both cellular apoptosis and proliferation [, ]. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle [], as is the protein MEK, which is thought to regulate the intracellular localization (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway []. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins []. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins []. This entry represents the C-terminal portion of these proteins. Structural studies of the yeast CSE1 protein indicate that this domain binds to both the transport-orchestrating protein RanGTP and the cargo molecule that is being exported [].; GO: 0005515 protein binding; PDB: 1Z3H_B 1WA5_C.
Probab=28.29 E-value=1.4e+02 Score=36.47 Aligned_cols=67 Identities=16% Similarity=0.349 Sum_probs=46.0
Q ss_pred cchhhhhhhhhhccCcCCccccchhhhHhhhcchHhhhhccHHHHHHHHHHHHhhcCccccccCCCCchhHHHHHHHhhh
Q psy8927 759 ADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNN 838 (1196)
Q Consensus 759 ADfLIisi~~LItt~~~rL~~ly~~LLtIL~NiSPY~k~LS~~assKLl~Lf~sfSsP~FL~~~~~n~~ll~~ll~~~~~ 838 (1196)
-||++=++.+++.+....+.+..+.++. +|.+.+..- -.+++|+++..|++|+++-
T Consensus 43 NeylMk~iMRvl~~~~e~~~p~~~~il~------------------~L~~il~~v------~kNPsnP~FnHylFEsi~~ 98 (435)
T PF03378_consen 43 NEYLMKCIMRVLSVLQEDILPIAVEILQ------------------HLTAILKEV------SKNPSNPRFNHYLFESIGA 98 (435)
T ss_dssp -HHHHHHHHHHHHHSTTTTGGGHHHHHH------------------HHHHHHHHH------HTS---HHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHH------------------HHHHHHHHH------HhCCCCcchhhhHHHHHHH
Confidence 3899999999988888777666555543 333333332 2467899999999999999
Q ss_pred hhcccccCchh
Q psy8927 839 IIQYQFDVSPY 849 (1196)
Q Consensus 839 ii~~~~~~~p~ 849 (1196)
+|.+..+.+|-
T Consensus 99 lir~~~~~~~~ 109 (435)
T PF03378_consen 99 LIRFVCEADPE 109 (435)
T ss_dssp HHHHS-GGGHH
T ss_pred HHHhccCCChh
Confidence 99988777664
No 10
>KOG2225|consensus
Probab=28.00 E-value=44 Score=40.64 Aligned_cols=103 Identities=19% Similarity=0.262 Sum_probs=62.3
Q ss_pred CCCchhhhHHHHH---HHHhhcCCccCCCCChhhHHhhcc---CCCCChhhhcccCChHHH--HHHHh--hCcchHHHHH
Q psy8927 1 MGNSDTKLNFRQA---VIQLTSKTQPIDASDNTFWNQFWS---ENVTNAQDIFTLIPSAEI--RALRE--EAPSNLATLC 70 (1196)
Q Consensus 1 MG~sdsKL~Fr~~---v~~L~~~~~~I~~~Dd~fW~~fW~---~~p~sa~DVF~Lisp~dI--R~~Rd--~~p~NlaTLi 70 (1196)
||.--+|-.--+. +-||+ |+.+-.+||+||+++-. ..++..||=-.|=++-|- ..+.- +.-.|++.+|
T Consensus 1 mg~~itk~~~l~~n~~lkk~~--g~~~~~d~d~fwn~ll~~~l~~~d~~ed~i~les~ld~~~q~~~~n~~~tgnf~a~i 78 (695)
T KOG2225|consen 1 MGSVITKETVLQENIYLKKLS--GLEPVDDYDPFWNKLLSFSLKFDDDDEDRIALESALDDHLQCLMYNTQTTGNFAAFI 78 (695)
T ss_pred CCcccchhhhcchhHHHHHhc--CCCcCccccHHHHhhhheeeecCCCcHHHhhhHHHHHHHHHHHhcCCcccCcHHHHH
Confidence 6666555443332 56675 35666789999999874 467888886666554331 22222 3458999999
Q ss_pred HHHHHHHHHhhcCc-CCCc---cccchhhhhHHhhhhcc
Q psy8927 71 YKAVEKLVNAVDSS-CRMA---HEQQAVLNCTRLLTRLI 105 (1196)
Q Consensus 71 ~~~v~rL~~~~~~~-~~~~---~~~~~~LNCiRlLTRiL 105 (1196)
+.-.+|-..+.... |... -++..||=-+|-+.|.|
T Consensus 79 ~~fl~r~tel~t~~~~e~~~~~wqt~nal~ilr~i~r~l 117 (695)
T KOG2225|consen 79 RLFLRRATELKTSEQCENKIYLWQTSNALLILRYIARFL 117 (695)
T ss_pred HHHHHHHHhhcchHhhhcceeehhhccHHHHHHHHHHHH
Confidence 99988887776432 1110 11124666666666644
Done!